BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047305
         (767 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score = 1026 bits (2652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/749 (65%), Positives = 599/749 (79%), Gaps = 1/749 (0%)

Query: 6   NEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS 65
           NEVLTI+D+V PIEPALE  +PFLS + VT +I    N  +GFRFFIWA+K +RLRS+ S
Sbjct: 34  NEVLTIIDSVNPIEPALESKVPFLSPSIVTYIIKNPPNSLLGFRFFIWASKFRRLRSWVS 93

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           ++ +I ML+K NGF+LYWQ L E++    S+ +D F VLI  Y K+   EKA+ESF  MK
Sbjct: 94  HNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMK 153

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +FDC+PDV+ YN VL++  RK++ LLAL +Y  M+KLNCLPNI TFS+LI+G+ KSGKT+
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQ 213

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A++M DEMTQR ILPNK TYTI+ISGLCQ  +AD AYRLF+ MKD GC PD V YNALL
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFCKL RVDEAL LL+ FEKD +V     YSCLIDGLFRA+R+++A  WYRKM E  I+
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK 333

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+LY +M++GLS+AGK KDA++LL++M ERG+VPDT+CYNALIKG+CDLGLLD+A+SL
Sbjct: 334 PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSL 393

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
            +EI K D   +  T+TILICGMCR+G+V DAQ++FN+MEK GC+PSV  FNALIDG CK
Sbjct: 394 HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AG +EKA LLFYKMEIG+NP+LFLRLSQG NRV D ASLQTMVEQ C +GLI KAY ILM
Sbjct: 454 AGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILM 513

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           QL +SG  P+IITYN LI+GFCK GNINGA KLFKELQLKGL PDSVTYGTLINGL   +
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSAN 573

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           REEDAF +  Q+ +NGCTP   VYKS MTWSCRR K +LAFSLWL+YLR I GRD E +K
Sbjct: 574 REEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLK 633

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
           S+EE  +KGEVE A++GLLEMDFKLNDFQLAPYTIWLIGLCQ G+++EAL IF  L E  
Sbjct: 634 SVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHN 693

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +VTPPSCVKLI+ L K G LDLA ++FLYT+  G++L PR+CN LL+SLL S+D K+  
Sbjct: 694 VLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSED-KRNR 752

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           A+ LL RMKS+GYDLD+ L+  TK LL G
Sbjct: 753 AFDLLSRMKSLGYDLDSHLHQTTKFLLQG 781


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  990 bits (2559), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/762 (61%), Positives = 594/762 (77%), Gaps = 2/762 (0%)

Query: 6   NEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS 65
           NEVLT+++TV P+E ALE L PFLS   V  V+ + + P++GFRFFIW  +R+  RS+ +
Sbjct: 39  NEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVT 98

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           ++ VI ML K +GFD YW+ L+EL++ N+ +    F VLI+ Y K G  EKA+ESFGKMK
Sbjct: 99  HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +F C+PDV+ YN++L++  +K++FLLALAVY +M+KLN  PN  TF +L+NGL K+GKT+
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+KM DEMTQ+GI PN   YTI++SGLCQ  R D+ +RL   MK SGC PD +  NALL
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFCKL ++DEA ALL+ FEK+G+V  +  YS LIDGLFRAKRYDE   W RKMF+  IE
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVVLY ++IRG  E G V  A+ +L+DM +RG+ PDTYCYNALIKGFCD+GLLD+ARSL
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           Q+EI K D  P + T+TILICGMCRNG++D+A+++FN+ME  GC PS+  FNALIDGLCK
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AGELE+A  LFYKMEIGKNP+LFLRLSQG +RV D ASLQTMVE+ C +GLI KAYK+LM
Sbjct: 459 AGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLM 518

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           QLA+SG +PDI+TYN LINGFCK  NINGA KLF+ELQLKG  PDSVTYGTLI+G  RVD
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           REEDAFR+  QM +NGCTPS AVYK LMTWSCR+ K S+AFSLWL+YLR +  ++DE++K
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK 638

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
             EE  +KGE+E A++ LLEM+FKLN+F++APYTIWLIGLCQ  + +EAL IF VL EC+
Sbjct: 639 LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQ 698

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
             V PPSCV LI+GLCK G L++A+D+FLYTL+ GF+L PR+CN LLRSL+    +K  H
Sbjct: 699 MDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQ--DKMKH 756

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMSPG 767
           A  LL RM S GYDLD  L+ + KS L   W  +EMEN++PG
Sbjct: 757 ALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQEMENVAPG 798


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  978 bits (2528), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/762 (61%), Positives = 590/762 (77%), Gaps = 2/762 (0%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           E+S  +EV T++ T+ P+EPALEP++PFLS   VTS+I    NPQ+GFRFFIWA+  KR 
Sbjct: 29  ETSISDEVFTVIKTMNPMEPALEPMVPFLSPKIVTSIIQNPPNPQLGFRFFIWASNFKRF 88

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           R++ S   +  +L+  NG +LY QTL+ L++G + V +D FFVLI  Y K+G  +KA+E+
Sbjct: 89  RAWESCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMET 148

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           FG M++FDC PDVY YN +L++  +K   LLAL VY  M+KLNCLPN+ TFS+LI+GL K
Sbjct: 149 FGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCK 208

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           SG  + A+ + DEMTQRGILP+ FTY +VISGLC+  R D+AYRLF KMKDSG  PDFV 
Sbjct: 209 SGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVT 268

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
            NALLNGFC L RVDEA +LLR FEKDG+V  +  YSCLI GLFRAKRY++    YRKM 
Sbjct: 269 CNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMI 328

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E+ ++PDV LY +M++GL+EAGKV+DA++LL++M E G+VPDT CYN LIKGFCD+GLL 
Sbjct: 329 EDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLS 388

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +ARSLQ+EI + D  PN  T++ILI GMCRNG+  DAQ++FN+MEK GC+PS   FN+LI
Sbjct: 389 EARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLI 448

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           DGLCK G+LEKA+LLFYKMEIG+NP+LFLRLSQG + V D ASLQ MVEQ C +GLIHKA
Sbjct: 449 DGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKA 508

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           Y+ILMQLA+SG+ P I TYN L+NGFCK+GN NGA KLF+E+Q KGL PD+VTYGTLING
Sbjct: 509 YRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLING 568

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           L R  REEDA+++F QM +NGCTP  AVY+++MTW CRR +   AFSLWL+YLR+I  ++
Sbjct: 569 LLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQE 628

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
           DE++K+IE + +K EVE A++GLLEMDFKLNDF L PY IWLIGLCQ  +V EAL IF +
Sbjct: 629 DEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLI 688

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK- 719
           L E K ++TPP CVKLI+ L K G LD A+DVFLYT++ G++LR RV N +L  L+  K 
Sbjct: 689 LEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKGYLLRRRVANRILTKLVRRKG 748

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
           +  K  A +LLCRMKSVGYDLDA L P TKSLL    N +EM
Sbjct: 749 EMGKDRAIYLLCRMKSVGYDLDAHLLPWTKSLL-HRHNIQEM 789


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/739 (58%), Positives = 552/739 (74%), Gaps = 13/739 (1%)

Query: 7   EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN 66
           EV++IL    PIEPALEPL+PFLSK  +TSVI +  N Q+GFRFFIWA++R+RLRS  S 
Sbjct: 36  EVISILAKKKPIEPALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESF 95

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
             VI ML + NG DLYWQTL+EL+SG VSV S  F VLIS Y K+G  EKA+ESFG+MKE
Sbjct: 96  GLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKE 155

Query: 127 FDCQPDVYIYNAVLNIAFRKQLF-LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           FDC+PDV+ YN +L I  R+ +F +LA AVY EM+K NC PN+ TF +L++GL K G+T 
Sbjct: 156 FDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A KM D+MT RGI PN+ TYTI+ISGLCQ    ++A +LF +MK SG  PD VA+NALL
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALL 275

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFCKL R+ EA  LLR FEKDGFV  L  YS LIDGLFRA+RY +A+  Y  M +  I+
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIK 335

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD++LY ++I+GLS+AGK++DA+KLL  M  +GI PDTYCYNA+IK  C  GLL++ RSL
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSL 395

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           Q+E+ + +S P+  T TILIC MCRNG+V  A+++F ++EK+GC PSV  FNALIDGLCK
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCK 455

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           +GEL++A LL +KME+G+  +LFLRL+  GNR     S  TMV+    +G I KAYK L 
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLAHSGNR-----SFDTMVQ----SGSILKAYKNLA 506

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
             A++GN PDI++YN LINGFC+ G+I+GALKL   LQLKGL PDSVTY TLINGL RV 
Sbjct: 507 HFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           REE+AF++F    ++    SPAVY+SLMTWSCRRRK  +AF+LW++YL+ IS  DDE+  
Sbjct: 567 REEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETAN 624

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            IE+  ++GE E A++ L+E+D + ++  L PYTIWLIGLCQ G+  EAL +FSVL E K
Sbjct: 625 EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKK 684

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +VTPPSCVKLIHGLCKR  LD A+DVFLYTL N F L PRVCNYLL SLL S++  ++ 
Sbjct: 685 ILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKMEIV 744

Query: 726 AYHLLCRMKSVGYDLDACL 744
           +  L  RM+  GYD+D+ L
Sbjct: 745 S-QLTNRMERAGYDVDSML 762


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/739 (58%), Positives = 555/739 (75%), Gaps = 13/739 (1%)

Query: 7   EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN 66
           EV++IL    PIEPALEPL+PFLSK  +TSVI    N Q+GFRFFIWA++R+RLRS  S 
Sbjct: 36  EVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRESF 95

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
             VI ML + NG DLYWQTL+EL+SG VSV S  F VLIS Y K+G  EKA+ESFG+MKE
Sbjct: 96  GLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE 155

Query: 127 FDCQPDVYIYNAVLNIAFRKQLF-LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           FDC+PDV+ YN +L +  R+++F +LA AVY EM+K NC PN+ TF +L++GL K G+T 
Sbjct: 156 FDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A KM D+MT RGI PN+ TYTI+ISGLCQ   AD+A +LF +M+ SG  PD VA+NALL
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFCKL R+ EA  LLR FEKDGFV  L  YS LIDGLFRA+RY +A+  Y  M ++ I+
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD++LY ++I+GLS+AGK++DA+KLLS M  +GI PDTYCYNA+IK  C  GLL++ RSL
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           Q+E+ + +S P+  T TILIC MCRNG+V +A+++F ++EK+GC PSV  FNALIDGLCK
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           +GEL++A LL +KME+G+  +LFLRLS  GNR     S  TMVE    +G I KAY+ L 
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNR-----SFDTMVE----SGSILKAYRDLA 506

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
             A++G+ PDI++YN LINGFC+ G+I+GALKL   LQLKGL PDSVTY TLINGL RV 
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           REE+AF++F    ++    SPAVY+SLMTWSCR+RK  +AF+LW++YL+ IS  DDE+  
Sbjct: 567 REEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN 624

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            IE+  ++GE E A++ L+E+D + ++  L PYTIWLIGLCQ G+  EAL +FSVL E K
Sbjct: 625 EIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKK 684

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +VTPPSCVKLIHGLCKR  LD A++VFLYTL N F L PRVCNYLL SLL S +  ++ 
Sbjct: 685 ILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIV 744

Query: 726 AYHLLCRMKSVGYDLDACL 744
           +  L  RM+  GY++D+ L
Sbjct: 745 S-QLTNRMERAGYNVDSML 762


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/747 (53%), Positives = 534/747 (71%), Gaps = 2/747 (0%)

Query: 3   STLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           +T  EV TI++T+ P+E  L+ +   +   T+TSV+ +  + ++GFR FIW+ K   LR 
Sbjct: 33  ATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRC 92

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
                 +I  L+K N F+LYW+ L EL++  + + S+ F VLI  Y + G  EKA+ESFG
Sbjct: 93  RTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFG 152

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M++FDC+PD++ +N +L+   RK+ FLLALAVY +M+K N  P++VT+ +LI+GL K+ 
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           KT+ A+ + DEMT RGILPN+  Y+IV+SGLCQ  +  +A RLF KM+ SGC+ D + YN
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LLNGFCK   +D+A  LL+   KDG +  +  Y CLI+GLFRA+RY+EA+ WY+KM  E
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I+PDV+LY +MIRGLS+ G+V +A+ LL +M ERG+ PDT CYNALIKGFCD+G LD+A
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL++EI K D  PN HT++ILICGMC+NG+++ AQ +F +MEK GC PSV  FN+LI+G
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCKA  LE+A LLFY+MEI + P+LFLRLSQG ++V D ASLQ M+E+ C +G+I KAYK
Sbjct: 453 LCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +LMQL +SG LPDI TYN LINGFCK GNINGA KLFKE+QLKG  PDSVTYGTLI+GL 
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           R  R EDA  IF QM + GC P  + YK++MTWSCR    SLA S+W++YLRD  G +DE
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDE 632

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            ++ + E     E++ AI+ LLEMD K  +F LAPYTI+LIGL Q  +  EA  IFSVL 
Sbjct: 633 KVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLK 692

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           + K  ++  SCV LI  LC    LD+AMDVFL+TL+ GF L P +CN LL +LL    ++
Sbjct: 693 DFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHL--DR 750

Query: 723 KVHAYHLLCRMKSVGYDLDACLYPKTK 749
           K  A  L  RM++ GYDL A L+ +TK
Sbjct: 751 KDDALFLANRMEASGYDLGAHLHYRTK 777


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/770 (52%), Positives = 539/770 (70%), Gaps = 12/770 (1%)

Query: 3   STLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           +T  EV TI++T+ P+E  L+ +   +   T+TSV+ +  + ++GFR FIW+ K   LR 
Sbjct: 33  ATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQPDTRLGFRLFIWSLKSWHLRC 92

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
                 +I  L+K N F+LYW+ L EL++  + + S+ F VLI  Y + G  EKA+ESF 
Sbjct: 93  RTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFS 152

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M++FDC+PD++ +N +L+   RK+ FLLALAVY +M+K N  P++VT+ +LI+GL K+ 
Sbjct: 153 LMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTC 212

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           KT+ A+ + DEMT RGILPN+  Y+IV+SGLCQ  +  +A RLF KM+ SGC+ D + YN
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYN 272

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LLNGFCK   +D+A  LL+   KDG +  +  Y CLI+GLFRA+RY+EA+ WY+KM  E
Sbjct: 273 VLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRE 332

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I+PDV+LY +MIRGLS+ G+V +A+ LL +M ERG+ PDT CYNALIKGFCD+G LD+A
Sbjct: 333 NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA 392

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL++EI K D  PN HT++ILICGMC+NG+++ AQ +F +MEK GC PSV  FN+LI+G
Sbjct: 393 ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLING 452

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCKA  LE+A LLFY+MEI + P+LFLRLSQG ++V D ASLQ M+E+ C +G+I KAYK
Sbjct: 453 LCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYK 512

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +LMQL +SG LPDI TYN LINGFCK GNINGA KLFKE+QLKG  PDSVTYGTLI+GL 
Sbjct: 513 LLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           R  R EDA  IF QM + GC P  + YK++MTWSCR    SLA S+W++YLRD  G +DE
Sbjct: 573 RAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDE 632

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            ++ + E     E++ AI+ LLEMD K  +F LAPYTI+LIGL Q  +  EA  IFSVL 
Sbjct: 633 KVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLK 692

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           + K  ++  SCV LI  LC    LD+AMDVFL+TL+ GF L P +CN LL +LL    ++
Sbjct: 693 DFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHL--DR 750

Query: 723 KVHAYHLLCRMKSVGYDLDACLY--------PKTKSLLPGPWNTREMENM 764
           K  A  L  RM++ G +L  C++        P  +S LP   +  +M+ +
Sbjct: 751 KDDALFLANRMEASGTEL--CIFIGANCKDIPTNESDLPMQLHRLQMQEL 798


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/764 (46%), Positives = 484/764 (63%), Gaps = 82/764 (10%)

Query: 6   NEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS 65
           NEVLT+++TV P+E ALE L PFLS   V  V+ + + P++GFRFFIW  +R+  RS+ +
Sbjct: 39  NEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVT 98

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           ++ VI ML K +GFD YW+ L+EL++ N+ +    F VLI+ Y K G  EKA+ESFGKMK
Sbjct: 99  HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +F C+PDV+ YN++L++  +K++FLLALAVY +M+KLN  PN  TF +L+NGL K+GKT+
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+KM DEMTQ+GI PN   YTI++SGLCQ  R D+ +RL   MK SGC PD +  NALL
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFCKL ++DEA ALL+ FEK+G+V  +  YS LIDGLFRAKRYDE   W RKMF+  IE
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVVLY ++IRG  E G V  A+ +L+DM +RG+ PDTYCYNALIKGFCD+GLLD+ARSL
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           Q+EI K D  P + T+TILICGMCRNG++D+A+++FN+ME  GC PS+  FNALIDGLCK
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AGELE+A  LFYKMEIGKNP+LFLRLSQG +RV D A+    V++         A+++L 
Sbjct: 459 AGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDRE------EDAFRVLD 512

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           Q+ ++G  P    Y  L+   C+ G ++ A  L+    LK LR                 
Sbjct: 513 QMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW----LKYLR-------------SLPS 555

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA-FSLWLQYLRDISGRDDESM 604
           +E++  ++  +  + G        + L+  + +   F +A +++WL  L   + R +E++
Sbjct: 556 QEDETLKLAEEHFEKG--ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQ-ARRSEEAL 612

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI-GLCQDGQVKEALNIFSVLVE 663
           K    FL   E         +MD         P  + LI GLC+DG ++ A++IF   +E
Sbjct: 613 KI---FLVLKEC--------QMDVN------PPSCVMLINGLCKDGNLEMAVDIFLYTLE 655

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
                              +G++                L PR+CN LLRSL+    +K 
Sbjct: 656 -------------------KGFM----------------LMPRICNQLLRSLILQ--DKM 678

Query: 724 VHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMSPG 767
            HA  LL RM S GYDLD  L+ + KS L   W  +EMEN++PG
Sbjct: 679 KHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQEMENVAPG 722


>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 749

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/709 (47%), Positives = 470/709 (66%), Gaps = 7/709 (0%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q G RF IW A +    S+     V  +L   N + +YW+ L+ L+   V V SD    L
Sbjct: 31  QRGIRFCIWVALKFENLSYEPYCLVNRILFHRNWYSIYWEALELLKKNGVLVTSDSVRAL 90

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           +  Y  +G  EKA+ESF +M+EF  +PD ++YN +L     ++L  LALA+Y  M+K N 
Sbjct: 91  VRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNV 150

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            PN  T+++LI+G  K G+ + A +MLDEM + GI+P   + T ++ G CQ N  DEA++
Sbjct: 151 EPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHK 210

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           LF  MK++   PD ++ N +LNGFCK+ R++EAL+ +   + DGF     SYS LI+  F
Sbjct: 211 LFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFF 270

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A+RY EA+AWY KMF++ I PDVVLY +MIRGLS+ G+V +A K+L +M + G+ PD Y
Sbjct: 271 KARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAY 330

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
           CYNA+I+G CD+GLL++A+SL++EI    S  N  T TILIC MC+ GMV +AQ+LFN+M
Sbjct: 331 CYNAVIQGLCDVGLLNRAQSLRLEI----SEHNVCTHTILICEMCKRGMVAEAQELFNQM 386

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
           EK GC PSV  FN LI+GLCKA  LEKA  LF K+E+G+  +L L LSQG  +V D A L
Sbjct: 387 EKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARL 446

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
               ++ C AG I +AYK++  LA     PDIITYN L+N  C    +N A   F+ LQ 
Sbjct: 447 LKKAKEMCEAGQILRAYKLITDLAGEVK-PDIITYNILLNALCMDREVNAAYNFFEFLQK 505

Query: 525 KGL-RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           KG   PD+VTYGT+I GL  VDRE++AF++F +M + G  P+ +VY++LMT  CR+ K S
Sbjct: 506 KGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVS 565

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            AF+L+ ++L+ +  RD++S+ ++E++L   ++E  I+GLLE+DFK  DF+LAPYTI LI
Sbjct: 566 RAFTLYFEHLKSLPSRDNDSISALEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLI 625

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G CQ G+V EAL I SVL E    +   SCV LI GLCK   L  A+ +FLY+L+ GF+L
Sbjct: 626 GFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFML 685

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           +P +CN+LL  LL+S+D K+     L+ RM+S GY L++  +  T +LL
Sbjct: 686 KPMICNHLLTCLLYSRDYKEC-VVDLIGRMESFGYRLNSEEFATTLALL 733


>gi|357483069|ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513156|gb|AES94779.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 749

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 333/709 (46%), Positives = 470/709 (66%), Gaps = 7/709 (0%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q G RF IW A +    S+     V  ++   N + +YW+ L+ L+   V V SD    L
Sbjct: 31  QRGIRFCIWVALKFENLSYEPYCLVNRIIFHKNWYSIYWEALELLKKNGVLVTSDSVRAL 90

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           +  Y  +G  EKA+ESF +M+EF  +PD ++YN +L     ++L  LALA+Y  M+K N 
Sbjct: 91  VRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLNEKLLELALALYTTMLKSNV 150

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            PN  T+++LI+G  K G+ + A +MLDEM + GI+P   + T ++ G CQ N  DEA++
Sbjct: 151 EPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNVDEAHK 210

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           LF  MK++   PD ++ N +LNGFCK+ R++EAL+ +   + DGF     SY+ LI+  F
Sbjct: 211 LFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYASLINAFF 270

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A+RY EA+A Y KMF+E I PDVVLY +MIRGLS+ G+V +A K+L +M + G+ PD+Y
Sbjct: 271 KARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSY 330

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
           CYNA+I+G CD+ LL++A+SL +EI    S  N  T TILIC MC+ GMV +AQ+LFN+M
Sbjct: 331 CYNAVIQGLCDVDLLNRAQSLSLEI----SEHNVCTHTILICEMCKRGMVAEAQELFNQM 386

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
           EK GC PSV  FN LI+GLCKA  LEKA  LF K+E+G+  +L L LSQG  +V D A L
Sbjct: 387 EKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARL 446

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
               ++ C AG I +AYK++  LA     PDIITYN L+N  C    +N A   F+ LQ 
Sbjct: 447 LKKAKEMCEAGQILRAYKLITDLAGEVK-PDIITYNILLNALCMDREVNAAYNFFEFLQK 505

Query: 525 KGL-RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           KG   PD+VTYGT+I GL  VDRE++AF++F +M + G  P+ +VY++LMT  CR+ K S
Sbjct: 506 KGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVS 565

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            AF+L+L++L+ +  RD++S+ ++E++L   ++E  I+GLLE+DFK  DF+LAPYTI LI
Sbjct: 566 RAFTLYLEHLKSLPSRDNDSISTLEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLI 625

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G CQ G+V EAL I SVL E    +   SCV LI GLCK   L  A+ +FLY+L+ GF+L
Sbjct: 626 GFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFML 685

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           +P +CN+LL  LL+S+D K+  A  L+ RM+S GY L++  +  T +LL
Sbjct: 686 KPMICNHLLTCLLYSRDYKEC-AVDLIDRMESFGYRLNSEEFATTLTLL 733


>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 302/549 (55%), Positives = 403/549 (73%), Gaps = 3/549 (0%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +P+  +++ + SGLC + RADEA+RLF  MK+ G  PD + Y+ L+NG+CKL R++EA++
Sbjct: 10  VPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEAIS 69

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
            LR  E+DG    +  YS LI G F A+RY+EA+AWY +MF++ I PDVVLY ++IRGLS
Sbjct: 70  FLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLS 129

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
             G+V +A K+L +M + G+VPD  CYN +IKG CD+GLLD+ARSLQ+EI +     N  
Sbjct: 130 SEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFHNVC 189

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T TI+IC +C+ GM + AQ++FNKMEK GCFPS+  FNAL+DGLCKAG+LE+A+LL YKM
Sbjct: 190 THTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKM 249

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           EIG++P+LF RLSQG ++V D  +LQ  VEQ C AG +  AYK+L+QLA SG +PDI+TY
Sbjct: 250 EIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTY 309

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N LINGFCK  NINGALKLFK++Q KGL P+ VTYGTLI+GL RV REEDAF+I   M +
Sbjct: 310 NVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLK 369

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
           +GC PS  VY++LMTW CR+++ S AFSL+L+YL+++ GR+D S+ ++EE   +GEVE A
Sbjct: 370 HGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSINALEECFVRGEVEQA 429

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            +GLLE+DF+  DF LAPYTI LIG CQ  +V EAL IF+VL +    + P SCV LI G
Sbjct: 430 FRGLLELDFRFRDFALAPYTILLIGFCQAEKVNEALLIFTVLDKFNININPASCVYLIRG 489

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           L + G LD A+++F+YTL  GF L+  VC  LL+  + S+D K+  A  L+ RMKS GY 
Sbjct: 490 LSENGRLDDAVNIFVYTLDKGFKLKSSVCEQLLK--ILSQDKKEC-AIDLVPRMKSAGYC 546

Query: 740 LDACLYPKT 748
           L+      T
Sbjct: 547 LNGLFLQNT 555



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 236/495 (47%), Gaps = 29/495 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           + VLI+GY K+G  E+A+ SF ++ E D     +  Y++++   F  + +  A A Y  M
Sbjct: 51  YSVLINGYCKLGRLEEAI-SFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRM 109

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   +P++V +++LI GLS  G+   A KML EM Q G++P+   Y  +I GLC +   
Sbjct: 110 FKKGIVPDVVLYTILIRGLSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLL 169

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  L L++ +     +   +  ++   CK    ++A  +    EK G  P + +++ L
Sbjct: 170 DRARSLQLEISEHQGFHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNAL 229

Query: 280 IDGLFRAKRYDEAYAWYRKM---------FEEKIEPDVVLYGVM----IRGLSEAGKVKD 326
           +DGL +A + +EA+    KM         F      D VL  V     +  + EAG++ D
Sbjct: 230 MDGLCKAGKLEEAHLLLYKMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLD 289

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A KLL  +   G++PD   YN LI GFC    ++ A  L  ++  +   PN  T+  LI 
Sbjct: 290 AYKLLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLID 349

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G+ R G  +DA K+   M K GC PS  ++ AL+  LC+   + +A  L+  +E  KN  
Sbjct: 350 GLFRVGREEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLY--LEYLKNL- 406

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                     R  +  S+  + E +   G + +A++ L++L        +  Y  L+ GF
Sbjct: 407 ----------RGREDNSINALEECF-VRGEVEQAFRGLLELDFRFRDFALAPYTILLIGF 455

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+   +N AL +F  L    +  +  +   LI GL    R +DA  IF      G     
Sbjct: 456 CQAEKVNEALLIFTVLDKFNININPASCVYLIRGLSENGRLDDAVNIFVYTLDKGFKLKS 515

Query: 567 AVYKSLMTWSCRRRK 581
           +V + L+    + +K
Sbjct: 516 SVCEQLLKILSQDKK 530



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 155/376 (41%), Gaps = 62/376 (16%)

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           S+P+  +F+ +  G+C     D+A +LFN M++ G  P +  ++ LI+G CK G LE+A 
Sbjct: 9   SVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGRLEEA- 67

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                         FLRL +            +++  + +A   ++A+    ++ + G +
Sbjct: 68  ------------ISFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIV 115

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV---DR---- 546
           PD++ Y  LI G    G +  A K+  E+   GL PD+V Y  +I GL  V   DR    
Sbjct: 116 PDVVLYTILIRGLSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSL 175

Query: 547 ----------------------------EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
                                        E A  IF +M + GC PS   + +LM   C+
Sbjct: 176 QLEISEHQGFHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCK 235

Query: 579 RRKFSLAFSLWLQ---------YLRDISGRDD-----ESMKSIEEFLQKGEVENAIQGLL 624
             K   A  L  +         + R   G D         K +E+  + G++ +A + L+
Sbjct: 236 AGKLEEAHLLLYKMEIGRSPSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLI 295

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           ++        +  Y + + G C+   +  AL +F  +        P +   LI GL + G
Sbjct: 296 QLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVG 355

Query: 685 YLDLAMDVFLYTLKNG 700
             + A  +  + LK+G
Sbjct: 356 REEDAFKIHKHMLKHG 371



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 139/340 (40%), Gaps = 54/340 (15%)

Query: 20  PALEPLLPFLSKTTVTSVIMKTKNPQV--------GFRFFIWAAKRKRLRSFASNSAVIS 71
           P+L   L   S   + SV ++ K  Q+         ++  I  A    +    + + +I+
Sbjct: 255 PSLFFRLSQGSDQVLDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYNVLIN 314

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
              K +  +   +   ++++  +S     +  LI G ++VG  E A +    M +  C+P
Sbjct: 315 GFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKHGCEP 374

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
              +Y A++    RK+    A ++Y E +K                 +  G+ + +I  L
Sbjct: 375 SFEVYRALMTWLCRKKRVSQAFSLYLEYLK-----------------NLRGREDNSINAL 417

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           +E   RG +   F       GL +++          + +D   +P    Y  LL GFC+ 
Sbjct: 418 EECFVRGEVEQAF------RGLLELD---------FRFRDFALAP----YTILLIGFCQA 458

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
            +V+EAL +    +K  F   +   SC  LI GL    R D+A   +    ++  +    
Sbjct: 459 EKVNEALLIFTVLDK--FNININPASCVYLIRGLSENGRLDDAVNIFVYTLDKGFKLKSS 516

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +   +++ LS+  K + A+ L+  M+  G     YC N L
Sbjct: 517 VCEQLLKILSQDKK-ECAIDLVPRMKSAG-----YCLNGL 550


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 307/729 (42%), Positives = 453/729 (62%), Gaps = 7/729 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVG-FRFFIWAAKRKRLRSFASNSAVISMLLK--PNGFDLYWQT 85
           L+   V+  ++    P     R F+++A   RLRS   ++  +S+LL+   +  +  +  
Sbjct: 65  LTPHAVSDALLCAAIPAASRLRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDA 124

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L + R+  +   S  F  L++ +   G    A+++F +M EF  +P  ++YN +L     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             + LLALA+Y  MV   C PN  T+++L++GL K G    A+KM DEM  RGI+PN   
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT+++S LC   + DEA +L   MKD GC PD V YNA L+G CK+ RV+EA   L   +
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             GF   L  YSCLIDGLF+A+R+DE + +Y+ M E  I PDVVLY +MIRG +EAG+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           DA+  L  M+++G VPDT+CYN ++K  CD G L++A +L+ E+ + + + ++ T TI+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           CG+C+ G+VD+A ++F++M + GC P+V  +NALIDG  + G LE+A +LF+KME+G NP
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           +LFLRL+ G N+V D  SL+ +V   C +G + KAYK+L  + +SG +PD++TYN+LING
Sbjct: 485 SLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK  N++GA++LFKELQLKG+ PD +TYGTLI+GL R  RE DA  +F  + Q+G +PS
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG--RDDESMKSIEEFLQKGEVENAIQGL 623
            ++Y S+M   CR +K S A +LWL YL        + E + +  + ++ G +++ ++ L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL 664

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +++D +       PYTIWLIGLCQ  +  +AL IF  L E    +TP  C  LI+ LC  
Sbjct: 665 IKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWD 724

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
             L+ A+D+ LY L    IL   V N LLR L      +   A  L  RM  VGYD+D  
Sbjct: 725 RNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA--LAWRMHLVGYDMDVY 782

Query: 744 LYPKTKSLL 752
           L   TKSLL
Sbjct: 783 LREPTKSLL 791


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/729 (42%), Positives = 453/729 (62%), Gaps = 7/729 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVG-FRFFIWAAKRKRLRSFASNSAVISMLLK--PNGFDLYWQT 85
           L+   V+  ++    P     R F+++A   RLRS   ++  +S+LL+   +  +  +  
Sbjct: 65  LTPHAVSDALLCAAIPAASRLRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDA 124

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L + R+  +   S  F  L++ +   G    A+++F +M EF  +P  ++YN +L     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             + LLALA+Y  MV   C PN  T+++L++GL K G    A+KM DEM  RGI+PN   
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT+++S LC   + DEA +L   MKD GC PD V YNA L+G CK+ RV+EA   L   +
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             GF   L  YSCLIDGLF+A+R+DE + +Y+ M E  I PDVVLY +MIRG +EAG+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           DA+  L  M+++G VPDT+CYN ++K  CD G L++A +L+ E+ + + + ++ T TI+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           CG+C+ G+VD+A ++F++M + GC P+V  +NALIDG  + G LE+A +LF+KME+G NP
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           +LFLRL+ G N+V D  SL+ +V   C +G + KAYK+L  + +SG +PD++TYN+LING
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK  N++GA++LFKELQLKG+ PD +TYGTLI+GL R  RE DA  +F  + Q+G +PS
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG--RDDESMKSIEEFLQKGEVENAIQGL 623
            ++Y S+M   CR +K S A +LWL YL        + E + +  + ++ G +++ ++ L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL 664

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +++D +       PYTIWLIGLCQ  +  +AL IF  L E    +TP  C  LI+ LC  
Sbjct: 665 IKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWD 724

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
             L+ A+D+ LY L    IL   V N LLR L      +   A  L  RM  VGYD+D  
Sbjct: 725 RNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA--LAWRMHLVGYDMDVY 782

Query: 744 LYPKTKSLL 752
           L   TKSLL
Sbjct: 783 LREPTKSLL 791


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 309/729 (42%), Positives = 461/729 (63%), Gaps = 8/729 (1%)

Query: 29  LSKTTVTSVIMKTKNPQVG-FRFFIWAAKRKRLRSFASNSAVISMLL--KPNGFDLYWQT 85
           L++ TV+  ++    P     R F+++A ++RLRS    S  +S+LL  +P+   ++   
Sbjct: 73  LTRRTVSDALICADLPAASRIRLFLYSAIKRRLRSPLLYSRAVSVLLASEPDAVAMF-DA 131

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L + R+  +   S  F  L+  +   G  ++A+E+F +M +FDC+P  ++YNAV  +   
Sbjct: 132 LADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVD 191

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + + LLALA+Y  MV   CLPN  T+ +L++GL K G    A+KM DEM +RGI+P+   
Sbjct: 192 RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKI 251

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT+++S LC   R ++A RL   MK++GC PD V Y   L+G CK  RVDEA       +
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             GF   L  YSCLIDGLF+A R+DE  ++Y +M  + I PD+ LY ++IR  +EAG+ K
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTK 371

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           DA  LL +M+++G VPDT+CYN L+K   D+G +D+A+SL  E+ + + + ++ T  I+I
Sbjct: 372 DAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           CG+C+ G++D A ++F++M + GC P+V  +NALIDGL +AG LE+A +LF+KME+G NP
Sbjct: 432 CGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNP 491

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           +LFLRL+ G N+V D  SL+ +V+  C +G + KAYK+L  + ESG +PD++TYN+LING
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK  N++GAL+LFKELQLKG+ PD +TYGTLI+GL R  RE DA  +F  + ++G  PS
Sbjct: 552 LCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPS 611

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYL--RDISGRDDESMKSIEEFLQKGEVENAIQGL 623
             +Y ++M   CR +K S A +LWL YL  +     +DE + +  +  + G ++  ++ L
Sbjct: 612 LPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKEL 671

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +++D         PYTIW+IGLCQ  ++ +AL IF +L E   +VTP  C  LI+ LC  
Sbjct: 672 IKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWD 731

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
             L+ A+D+ +YTL   FI+   V N LLRSL      ++  A  L  RM  VGYD+D  
Sbjct: 732 RNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRY--RRHDAQALSWRMHLVGYDMDVY 789

Query: 744 LYPKTKSLL 752
           L   TK LL
Sbjct: 790 LREATKDLL 798


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 321/755 (42%), Positives = 456/755 (60%), Gaps = 14/755 (1%)

Query: 10  TILDTVTPIEPALEPLLPFLSK-----TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-F 63
            +L T+ P  P+L P L  LS+     +   +++     P    R F+++A   RLRS  
Sbjct: 45  ALLSTLPPSLPSLFPCLSLLSRRLTPHSVADALLCDALPPASRIRLFLFSALTPRLRSPL 104

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
             + AV+ +LL  +     +  + + ++  +   +  F  LI  +   G   +A+E+F +
Sbjct: 105 LHSRAVVPILLATDADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSR 164

Query: 124 MK-EFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           M+ EF C+P  ++YNAVL +       + LALA+Y  MV   CLPN  T+++LI+GL K 
Sbjct: 165 MEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKR 224

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A+K+ DEM  RGI PN  T+TI++S +C   +  EA  L   M+D GC PD V Y
Sbjct: 225 GTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTY 284

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           NA L+G CK  RVDEA+  L +    G FV  L  YSCLIDGLF A RY+E +  Y ++ 
Sbjct: 285 NAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 344

Query: 301 EEK-IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
           E+  + PD+VLY +MIRG +EAG+  DA     +M+E+G  PDT+CYN L+K  CD G L
Sbjct: 345 EQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDL 404

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D ARSL  E+ + + + + HT+T +I G+C+  +VD+A ++F+ M + GC PSV  +N L
Sbjct: 405 DGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVL 464

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           IDGL +A  LE+A +LFYKME+G NP+LFLRL+ G N+V D  +LQ +VE  C +G + K
Sbjct: 465 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLK 524

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           AYK+L  + +SG +PD++TYN+L+NG CKV N++GAL+LF+ELQ+KG   D +TYGTLI+
Sbjct: 525 AYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLID 584

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG- 598
            L R  R  DA  +F  +  +G TPS  +Y S+M   CR +K S A +LW  +L      
Sbjct: 585 SLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNL 644

Query: 599 -RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
              DE + S  +  ++G +  A++ L+++D +       PYTIWLIGL Q G++++AL I
Sbjct: 645 LAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKI 704

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F +L E    +TP  CV L   LC  G L  A+DV LYTLK GF +R  V N LL SL  
Sbjct: 705 FHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCI 764

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
               K   A  L  RM  VGYD+DA L+  TK LL
Sbjct: 765 HHRRKDAQA--LAWRMHLVGYDMDAYLHESTKGLL 797


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/729 (41%), Positives = 451/729 (61%), Gaps = 7/729 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVG-FRFFIWAAKRKRLRSFASNSAVISMLLK--PNGFDLYWQT 85
           L+   V+  ++    P     R F+++A   RLRS   ++  +S+LL+   +  +  +  
Sbjct: 65  LTPHAVSDALLCAAIPAASRLRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDA 124

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L + R+  +   S  F  L++ +   G    A+++F +M EF  +P  ++YN +L     
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             + LLALA+Y  MV   C PN  T+++L++GL K G    A+KM DEM  RGI+PN   
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT+++S LC   + DEA +L   MKD GC PD V YNA L+G CK+ RV+EA   L   +
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             GF   L  YSCLIDGLF+A+R+DE + +Y+ M E  I PDVVLY +MIRG +EAG+++
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           DA+  L  M+++G VPDT+CYN ++K  CD G L++A +L+ E+ + + + ++ T TI+I
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           CG+C+ G+VD+A ++F++M + GC P+V  +NALIDG  + G LE+A +LF+KME+G NP
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNP 484

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           +LFLRL+ G N+V D  SL+ +V   C +G + KAYK+L  + +SG +PD++TYN+LING
Sbjct: 485 SLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLING 544

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK  N++GA++LFKELQLKG+ PD +TYGTLI+GL R  RE DA  +F  + Q+G +PS
Sbjct: 545 LCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPS 604

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG--RDDESMKSIEEFLQKGEVENAIQGL 623
            ++Y S+M   CR +K S A +LWL YL        + E + +  + ++ G +++ ++ L
Sbjct: 605 LSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVREL 664

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +++D +       PYTIWLIGLCQ  +  +AL IF  L E    +TP  C  LI+ LC  
Sbjct: 665 IKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWD 724

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
             L+ A+D+ LY L    IL   V N LLR L      +   A  L  RM  VGYD+D  
Sbjct: 725 RNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQA--LAWRMHLVGYDMDVY 782

Query: 744 LYPKTKSLL 752
           L   TK  +
Sbjct: 783 LREPTKKFV 791


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/756 (41%), Positives = 455/756 (60%), Gaps = 16/756 (2%)

Query: 10  TILDTVTPIEPALEPLLPFLSK-----TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-F 63
           ++L T+ P  P+  P L  LS+     +   +++     P    R F+++A   RLRS  
Sbjct: 43  SLLSTLPPSLPSFFPCLSLLSRRLTPHSVADALLCAALPPASRLRLFLFSALTPRLRSPL 102

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
             + AV+ +LL  +     +  + + ++  +   +  F  LI  +   G   +A+++F +
Sbjct: 103 LHSRAVVPILLATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSR 162

Query: 124 MK-EFDCQPDVYIYNAVLNIAFRKQ-LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           M+ EF C+P  ++YNAVL +      +  LALA+Y  MV   CLPN  T+++L++GL K 
Sbjct: 163 MEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKR 222

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A+K+ DEM QRGI PN  T+TI++S +C   +  EA  L   M+D GC PD V Y
Sbjct: 223 GTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTY 282

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           NA L+G CK  RVDEA+  L +  + G FV  L  YSCLIDGLF A RY+E +  Y ++ 
Sbjct: 283 NAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVL 342

Query: 301 EEK-IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
           E+    PD+VLY +MIRG +EAG++ DA     +M+E+   PDT+CYN L+K  CD G L
Sbjct: 343 EQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSGDL 402

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D ARSL  E+ + + + +T+T TI+I G+C+  +VD+A ++F+ M + GC P+V  +N L
Sbjct: 403 DGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVL 462

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           IDGL +A  LE+A +LFYKME+G NP+LFLRL+ G N+V D  SLQ +V+  C +G + K
Sbjct: 463 IDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLK 522

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           AYK+L  + +SG +PD++TYN+L+NG CKV N++GAL+LF+ELQ+KG   D +TYGTLI+
Sbjct: 523 AYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLID 582

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL---RDI 596
            L R  R  DA  +F  +   G TPS ++Y S+M   CR  K S A + W  +L    ++
Sbjct: 583 SLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNL 642

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
           S + DE + S  +  ++G ++ A++ L+++D +       PYTIWLIGL Q  ++ +AL 
Sbjct: 643 SAQ-DEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALK 701

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           IF +L E    +TP  C  L   LC    LD A+DV LYTL   FI+   V N LL SL 
Sbjct: 702 IFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTLNKRFIMSRHVGNRLLSSLC 761

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
                K   A  L  RM  VGYD+DA L   TK LL
Sbjct: 762 IRHRRKDAQA--LAWRMHLVGYDMDAYLRESTKGLL 795


>gi|356518708|ref|XP_003528020.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g79540-like [Glycine max]
          Length = 535

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/440 (57%), Positives = 324/440 (73%), Gaps = 1/440 (0%)

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           E IEPDVVLY ++IRGLS  G+V +A K+L +M +RG+VPD  CYN +IKG C++GLLDQ
Sbjct: 16  ESIEPDVVLYTILIRGLSREGRVGEAGKMLGEMTQRGLVPDVVCYNEIIKGLCNVGLLDQ 75

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           ARSLQ+EI +     N  T TILIC + + GMV+ AQ +FNK+EK GCFPS   FNAL+ 
Sbjct: 76  ARSLQLEISEHRXFHNVCTHTILICDLYKRGMVEKAQXIFNKLEKLGCFPSAVTFNALMH 135

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           GLCKAG+LE+A+LL YKMEIG++P+LF  LSQG ++V D  SLQ  VEQ C AG +  AY
Sbjct: 136 GLCKAGKLEEAHLLLYKMEIGRSPSLFFWLSQGSDQVLDTVSLQKKVEQMCEAGQLVDAY 195

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+L Q+A SG +PDI+TYN LINGFCK  NINGALK FK++Q KG  P+SVTYGTLI+GL
Sbjct: 196 KLLTQVACSGVMPDIVTYNVLINGFCKAANINGALKFFKDMQNKGFSPNSVTYGTLIDGL 255

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            R+ REEDAF+I   M ++GC PS  VY++LMTW CR+RK S AF L+L+YL+++ GR+D
Sbjct: 256 FRIGREEDAFKIREHMLKHGCEPSFEVYRALMTWLCRKRKVSQAFRLYLEYLKNLRGRED 315

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           +S+ ++E+   +G+VE A QGLLE+DF+L DF LAPYTI LIG CQ  +V EA  IFSVL
Sbjct: 316 DSINALEQCFVRGKVEQAFQGLLELDFRLRDFALAPYTILLIGFCQAEKVDEASVIFSVL 375

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            +    + P SCV LI GL ++G LD A+++FLYTL   F L+  VC  LL  L  S+D 
Sbjct: 376 DKFNININPTSCVFLIRGLSEKGRLDDAVNIFLYTLDRCFKLKSSVCEQLLNHLNLSQDK 435

Query: 722 KKVHAYHLLCRMKSVGYDLD 741
           K+  A  L+ RMKS GY L+
Sbjct: 436 KEC-AIDLVHRMKSAGYLLN 454



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 195/402 (48%), Gaps = 27/402 (6%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++V +++LI GLS+ G+   A KML EMTQRG++P+   Y  +I GLC +   D+A  L
Sbjct: 20  PDVVLYTILIRGLSREGRVGEAGKMLGEMTQRGLVPDVVCYNEIIKGLCNVGLLDQARSL 79

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
            L++ +     +   +  L+    K   V++A  +    EK G  P   +++ L+ GL +
Sbjct: 80  QLEISEHRXFHNVCTHTILICDLYKRGMVEKAQXIFNKLEKLGCFPSAVTFNALMHGLCK 139

Query: 286 AKRYDEAYAWYRKM---------FEEKIEPDVVLYGV----MIRGLSEAGKVKDAMKLLS 332
           A + +EA+    KM         F      D VL  V     +  + EAG++ DA KLL+
Sbjct: 140 AGKLEEAHLLLYKMEIGRSPSLFFWLSQGSDQVLDTVSLQKKVEQMCEAGQLVDAYKLLT 199

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            +   G++PD   YN LI GFC    ++ A     ++  +   PN+ T+  LI G+ R G
Sbjct: 200 QVACSGVMPDIVTYNVLINGFCKAANINGALKFFKDMQNKGFSPNSVTYGTLIDGLFRIG 259

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
             +DA K+   M K GC PS  ++ AL+  LC+  ++ +A  L+  +E  KN        
Sbjct: 260 REEDAFKIREHMLKHGCEPSFEVYRALMTWLCRKRKVSQAFRLY--LEYLKNL------- 310

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
               R  +  S+  + EQ    G + +A++ L++L        +  Y  L+ GFC+   +
Sbjct: 311 ----RGREDDSINAL-EQCFVRGKVEQAFQGLLELDFRLRDFALAPYTILLIGFCQAEKV 365

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + A  +F  L    +  +  +   LI GL    R +DA  IF
Sbjct: 366 DEASVIFSVLDKFNININPTSCVFLIRGLSEKGRLDDAVNIF 407



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 187/404 (46%), Gaps = 66/404 (16%)

Query: 95  SVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL----NIA----- 143
           S+  DV  + +LI G  + G   +A +  G+M +    PDV  YN ++    N+      
Sbjct: 17  SIEPDVVLYTILIRGLSREGRVGEAGKMLGEMTQRGLVPDVVCYNEIIKGLCNVGLLDQA 76

Query: 144 --------------------------FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
                                     +++ +   A  ++ ++ KL C P+ VTF+ L++G
Sbjct: 77  RSLQLEISEHRXFHNVCTHTILICDLYKRGMVEKAQXIFNKLEKLGCFPSAVTFNALMHG 136

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTY----------TIV----ISGLCQINRADEAY 223
           L K+GK E A  +L +M + G  P+ F +          T+     +  +C+  +  +AY
Sbjct: 137 LCKAGKLEEAHLLLYKM-EIGRSPSLFFWLSQGSDQVLDTVSLQKKVEQMCEAGQLVDAY 195

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  ++  SG  PD V YN L+NGFCK   ++ AL   +  +  GF P   +Y  LIDGL
Sbjct: 196 KLLTQVACSGVMPDIVTYNVLINGFCKAANINGALKFFKDMQNKGFSPNSVTYGTLIDGL 255

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL----LSDMRERGI 339
           FR  R ++A+     M +   EP   +Y  ++  L    KV  A +L    L ++R R  
Sbjct: 256 FRIGREEDAFKIREHMLKHGCEPSFEVYRALMTWLCRKRKVSQAFRLYLEYLKNLRGR-- 313

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             +    NAL + F   G ++QA    +E+  R        +TIL+ G C+   VD+A  
Sbjct: 314 --EDDSINALEQCFVR-GKVEQAFQGLLELDFRLRDFALAPYTILLIGFCQAEKVDEASV 370

Query: 400 LFNKMEK--AGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKME 440
           +F+ ++K      P+  +F  LI GL + G L+ A N+  Y ++
Sbjct: 371 IFSVLDKFNININPTSCVF--LIRGLSEKGRLDDAVNIFLYTLD 412



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 40/207 (19%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ++++   S  S  +  LI G +++G  E A +    M +  C+P   +Y A++    RK+
Sbjct: 235 DMQNKGFSPNSVTYGTLIDGLFRIGREEDAFKIREHMLKHGCEPSFEVYRALMTWLCRKR 294

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +Y E +K                 +  G+ + +I  L++   RG +   F   
Sbjct: 295 KVSQAFRLYLEYLK-----------------NLRGREDDSINALEQCFVRGKVEQAF--- 334

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
               GL +++          +++D   +P    Y  LL GFC+  +VDEA  +    +K 
Sbjct: 335 ---QGLLELD---------FRLRDFALAP----YTILLIGFCQAEKVDEASVIFSVLDK- 377

Query: 268 GFVPRLGSYSC--LIDGLFRAKRYDEA 292
            F   +   SC  LI GL    R D+A
Sbjct: 378 -FNININPTSCVFLIRGLSEKGRLDDA 403


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 192/597 (32%), Positives = 303/597 (50%), Gaps = 52/597 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI+G+ KV    +A     +MKE    P+V  Y+ V++   R+     A  ++ +M
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 222

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+  C+PN+VT++ L++GL ++G  + A ++LDEM +RG+ P+KF+Y  +++GLC+  + 
Sbjct: 223 VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 282

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A ++F    +  C PD VAY+ L+ G CK  R+DEA  L     ++   P + +++ L
Sbjct: 283 DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTAL 342

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL +  R  EA      M +    P+V+ Y  +I GL + G+V+DA ++   M  RGI
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN+LI GFC    +D A  L  E+     LP+  T+  LI G+C+ G   +A +
Sbjct: 403 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF  M+   C P V  ++ LI G CK   ++ A  LF  M           L Q    + 
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM-----------LKQA--VLP 509

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T+VE YC AGL+  A ++L ++  S   PD+ TY SL++GFCKVG +  A ++ 
Sbjct: 510 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 569

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K +  +G +P+ VTY  LI+   R  +   A+R+  +M  NG  P+   Y+SL+   C  
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFC-- 627

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                               D E  + I E L++ E   A               +  Y 
Sbjct: 628 -----------------GTGDLEEARKILERLERDENCKA--------------DMFAYR 656

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVF 693
           + + GLC+ G++  AL +   +   K   TPP     V LI GLC+   L  AM+V 
Sbjct: 657 VMMDGLCRTGRMSAALELLEAI---KQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 710



 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 190/657 (28%), Positives = 328/657 (49%), Gaps = 26/657 (3%)

Query: 43  NPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDLYWQTLDELRSG-NVSVVSDV 100
           +P    RFF WA+K++    +  + + +   LL+    D   +T   L++G    +  +V
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRID---ETCHILKNGWPPGITPNV 59

Query: 101 FF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           F   V+I G  K GD +KA E   +M+E    PD  IYN V++   + +    AL  +  
Sbjct: 60  FTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRS 119

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M    C  N++T++++I+GL K+ +   A     +M ++G +PN++TY ++I+G C++++
Sbjct: 120 M---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              AY L  +MK+SG +P+ V Y+ +++GFC+  +VD A  L R   ++G +P L +Y+ 
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+ GL R    DEAY    +M E  ++PD   Y  ++ GL + GK+  A+K+  D     
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y+ LI G C  G LD+A  L  ++ +    P+  TFT L+ G+C+   + +AQ
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           ++   ME   C P+V  +++LIDGLCK G++  A  +F +M + G  P +          
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV---------- 406

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                +  +++  +C    +  A  ++ ++  +G LPDIITYN+LI+G CK G    A +
Sbjct: 407 ----VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 462

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF +++ K   PD +TY  LI G  +++R + A  +F  M +    P    + +L+   C
Sbjct: 463 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYC 522

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
                  A  L  + +      D  +  S ++ F + G +  A + L  M  +     + 
Sbjct: 523 NAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            YT  +   C+ G+   A  +   +V         +   LI G C  G L+ A  + 
Sbjct: 583 TYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 244/487 (50%), Gaps = 13/487 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S   +++ L K    D+  +  ++  +G+       +  LI+G  K G  ++A + F KM
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +E  C+PDV  + A+++   +      A  V   M   NC PN++T+S LI+GL K+G+ 
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++   M  RGI PN  TY  +I G C  N  D A  L  +M  +GC PD + YN L
Sbjct: 388 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 447

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G CK  R  EA  L    +     P + +YSCLI G  + +R D A   +  M ++ +
Sbjct: 448 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 507

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDVV +  ++ G   AG V DA +LL +M      PD Y Y +L+ GFC +G + +AR 
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +   + KR   PN  T+T LI   CR G    A +L  +M   G  P+V  + +LI G C
Sbjct: 568 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFC 627

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
             G+LE+A  +  ++E  +N               D  + + M++  C  G +  A ++L
Sbjct: 628 GTGDLEEARKILERLERDENCK------------ADMFAYRVMMDGLCRTGRMSAALELL 675

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL-KGLRPDSVTYGTLINGLQR 543
             + +SG  P    Y +LI G C+   +  A+++ +E+ L +  RP++  Y  +I  L R
Sbjct: 676 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 735

Query: 544 VDREEDA 550
             R E+A
Sbjct: 736 EGRHEEA 742



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 291/604 (48%), Gaps = 53/604 (8%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           E  L P    ++ +TV     +       ++ F    +   + +  + + ++S L +   
Sbjct: 189 ESGLAP--NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D  ++ LDE+R   +      +  L++G  K G  + AL+ F      DC PDV  Y+ 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++    +      A  ++ +M + +C P++VTF+ L++GL K  + + A ++L+ M  R 
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN  TY+ +I GLC+  +  +A  +F +M   G  P+ V YN+L++GFC    VD AL
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L+      G +P + +Y+ LIDGL +  R  EA   +  M  +   PDV+ Y  +I G 
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +  ++  A  L  DM ++ ++PD   ++ L++G+C+ GL+D A  L  E+   D  P+ 
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           +T+T L+ G C+ G + +A+++  +M K GC P+V  + ALID  C+AG+          
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK---------- 596

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
                 PT+                                AY++L ++  +G  P++IT
Sbjct: 597 ------PTV--------------------------------AYRLLEEMVGNGVQPNVIT 618

Query: 499 YNSLINGFCKVGNINGALKLFKELQL-KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           Y SLI GFC  G++  A K+ + L+  +  + D   Y  +++GL R  R   A  +   +
Sbjct: 619 YRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAI 678

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD-ESMKS-IEEFLQKGE 615
            Q+G  P   +Y +L+   C+ ++   A  +  +       R + E+ ++ I+E  ++G 
Sbjct: 679 KQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGR 738

Query: 616 VENA 619
            E A
Sbjct: 739 HEEA 742



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 220/461 (47%), Gaps = 66/461 (14%)

Query: 259 ALLRSF----EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           A LR F    ++ GF   + +Y+ L + L RA+R DE     +  +   I P+V  Y V+
Sbjct: 6   AALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL----GLLDQARSLQVEIW 370
           I+GL ++G +  A +LL +MRE G VPD   YN +I   C        LD  RS++ E  
Sbjct: 66  IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE-- 123

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                 N  T+TI+I G+C+   + +A   F KM+K G  P+   +N LI+G CK  ++ 
Sbjct: 124 -----KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A LL  +M E G  P +               +  T++  +C    +  AYK+  Q+ E
Sbjct: 179 RAYLLLKEMKESGLAPNV--------------VTYSTVIHGFCRQTKVDTAYKLFRQMVE 224

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +G +P+++TYN+L++G C+ G ++ A +L  E++ +GL+PD  +Y TL+ GL +  + + 
Sbjct: 225 NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDM 284

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A ++F       C P    Y +L+   C+                  +GR DE+ K  E+
Sbjct: 285 ALKVFEDNSNGDCPPDVVAYSTLIAGLCK------------------AGRLDEACKLFEK 326

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
                  EN+ +             +  +T  + GLC+  +++EA  +   + +      
Sbjct: 327 MR-----ENSCEP-----------DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +   LI GLCK G +  A +VF   +  G  + P V  Y
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRG--IEPNVVTY 409



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 172/359 (47%), Gaps = 14/359 (3%)

Query: 56  KRKRLRSFASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           KR  +R    N    + L+      NG D     ++E+ +         +  LI G  K 
Sbjct: 395 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 454

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G   +A   FG MK   C PDV  Y+ ++    + +   +A  ++ +M+K   LP++VTF
Sbjct: 455 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 514

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L+ G   +G  + A ++L+EM      P+ +TYT ++ G C++ R  EA R+  +M  
Sbjct: 515 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 574

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC P+ V Y AL++ FC+  +   A  LL     +G  P + +Y  LI G       +E
Sbjct: 575 RGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 634

Query: 292 AYAWYRKMFE-----EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           A    RK+ E     E  + D+  Y VM+ GL   G++  A++LL  +++ G  P    Y
Sbjct: 635 A----RKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 690

Query: 347 NALIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            ALI+G C    L +A  +  E+   R S PN   +  +I  + R G  ++A  L +++
Sbjct: 691 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 110/286 (38%), Gaps = 45/286 (15%)

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           H+  +   + E    A  I +   IL      G  P++ TY  +I G CK G+++ A +L
Sbjct: 22  HNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACEL 81

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +E++  G  PD+  Y  +I+ L +      A   F  M            K+++TW+  
Sbjct: 82  LEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---------ECEKNVITWTIM 132

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                 A             R  E+     +  +KG V N                   Y
Sbjct: 133 IDGLCKA------------NRLPEATTYFAKMKKKGTVPNEWT----------------Y 164

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLY 695
            + + G C+  +V  A   + +L E K     P+ V    +IHG C++  +D A  +F  
Sbjct: 165 NVLINGFCKVHKVHRA---YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQ 221

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            ++NG +      N LL  L   ++     AY LL  M+  G   D
Sbjct: 222 MVENGCMPNLVTYNTLLSGL--CRNGLMDEAYELLDEMRERGLQPD 265


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 188/597 (31%), Positives = 301/597 (50%), Gaps = 52/597 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI+G+ KV    +A     +MKE    P+V  Y+ V++   R+     A  ++ +M
Sbjct: 44  TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 103

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+  C+PN+VT++ L++GL ++G  + A ++LDEM +RG+ P+KF+Y  +++GLC+  + 
Sbjct: 104 VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 163

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A ++F    +  C PD VAY+ L+ G CK  R+DEA  L     ++   P + +++ L
Sbjct: 164 DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTAL 223

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL +  R  EA      M +    P+V+ Y  +I GL + G+V+DA ++   M  RGI
Sbjct: 224 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 283

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN+LI GFC    +D A  L  E+     LP+  T+  LI G+C+ G   +A +
Sbjct: 284 EPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANR 343

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF  M+   C P V  ++ LI G CK   ++ A  LF  M           L Q    + 
Sbjct: 344 LFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM-----------LKQA--VLP 390

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T+VE YC AGL+  A ++L ++  S   PD+ TY SL++GFCKVG +  A ++ 
Sbjct: 391 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVL 450

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K +  +G +P+ VTY  LI+   R  +   A+++  +M  NG  P+   Y+SL+   C  
Sbjct: 451 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGT 510

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                A  +  +  RD + + D                                 +  Y 
Sbjct: 511 GDLEEARKMLERLERDENCKAD---------------------------------MFAYR 537

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVF 693
           + + GLC+ G++  AL +   +   K   TPP     V LI GLC+   L  AM+V 
Sbjct: 538 VMMDGLCRTGRMSAALELLEAI---KQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 591



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 244/487 (50%), Gaps = 13/487 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S   +++ L K    D+  +  ++  +G+       +  LI+G  K G  ++A + F KM
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +E  C+PDV  + A+++   +      A  V   M   NC PN++T+S LI+GL K+G+ 
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++   M  RGI PN  TY  +I G C  N  D A  L  +M  +GC PD + YN L
Sbjct: 269 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 328

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G CK  R  EA  L    +     P + +YSCLI G  + +R D A   +  M ++ +
Sbjct: 329 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDVV +  ++ G   AG V DA +LL +M      PD Y Y +L+ GFC +G + +AR 
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +   + KR   PN  T+T LI   CR G    A KL  +M   G  P+V  + +LI G C
Sbjct: 449 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFC 508

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
             G+LE+A  +  ++E  +N               D  + + M++  C  G +  A ++L
Sbjct: 509 GTGDLEEARKMLERLERDENCK------------ADMFAYRVMMDGLCRTGRMSAALELL 556

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL-KGLRPDSVTYGTLINGLQR 543
             + +SG  P    Y +LI G C+   +  A+++ +E+ L +  RP++  Y  +I  L R
Sbjct: 557 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 616

Query: 544 VDREEDA 550
             R E+A
Sbjct: 617 EGRHEEA 623



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 173/359 (48%), Gaps = 14/359 (3%)

Query: 56  KRKRLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           KR  +R    N    +++I      NG D     ++E+ +         +  LI G  K 
Sbjct: 276 KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKT 335

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G   +A   FG MK   C PDV  Y+ ++    + +   +A  ++ +M+K   LP++VTF
Sbjct: 336 GRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTF 395

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L+ G   +G  + A ++L+EM      P+ +TYT ++ G C++ R  EA R+  +M  
Sbjct: 396 STLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK 455

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC P+ V Y AL++ FC+  +   A  LL     +G  P + +Y  LI G       +E
Sbjct: 456 RGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEE 515

Query: 292 AYAWYRKMFE-----EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           A    RKM E     E  + D+  Y VM+ GL   G++  A++LL  +++ G  P    Y
Sbjct: 516 A----RKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 571

Query: 347 NALIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            ALI+G C    L +A  +  E+   R S PN   +  +I  + R G  ++A  L +++
Sbjct: 572 VALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 158/335 (47%), Gaps = 51/335 (15%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+TI+I G+C+   + +A   F KM+K G  P+   +N LI+G CK  ++ +A LL 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M E G  P +               +  T++  +C    +  AYK+  Q+ E+G +P+
Sbjct: 66  KEMKESGLAPNVV--------------TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPN 111

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+L++G C+ G ++ A +L  E++ +GL+PD  +Y TL+ GL +  + + A ++F 
Sbjct: 112 LVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE 171

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
                 C P    Y +L+   C+                  +GR DE+ K  E+      
Sbjct: 172 DNSNGDCPPDVVAYSTLIAGLCK------------------TGRLDEACKLFEKMR---- 209

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            EN+ +             +  +T  + GLC+  +++EA  +   + +        +   
Sbjct: 210 -ENSCEP-----------DVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           LI GLCK G +  A +VF   +  G  + P V  Y
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRG--IEPNVVTY 290


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 228/827 (27%), Positives = 365/827 (44%), Gaps = 109/827 (13%)

Query: 7   EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRK-RLRSFAS 65
           ++L +L + + I   LE     L    V+ V+ + K+PQ    FF+WA  R  +  +F  
Sbjct: 69  DLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTR 128

Query: 66  N----------------------------------SAVISMLLKPNGFDLYWQTLDELRS 91
           N                                    VI  L + N  D  +  LD+ + 
Sbjct: 129 NCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKV 188

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
                   V+ +L   + K G  + ALE F  +      PD   YNA+++   RK     
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDG 244

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL    EM +    P++ T+++LI+GL K+ KT+ A +ML EM  RG+ P+  T+  ++ 
Sbjct: 245 ALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMD 304

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+  + + A+ L   M +  C P    YN L++G CK + VD A  L+  F   GFVP
Sbjct: 305 GLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVP 364

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +YS L DGL +  R DEA+   ++M  +   P++V Y  +I GL +A K + A +LL
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             +   G VPD   Y  ++ G C  G LD+A  +   + KR   P+  T+T L+ G+CR 
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484

Query: 392 GMVDDAQKLFNKMEKAGC--------------------------------FPSVGMFNAL 419
           G VD+A  +F +M    C                                 P + ++NAL
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNAL 544

Query: 420 IDGLCKAGELEKANLLFYKMEI-GKNPTL---------------------FLRLSQGGNR 457
           +DG CK G L++   +F  M   G  P +                     FL        
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 604

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           V D  S   +++    A    +A ++L Q+ ++G  PD +TYN+L+  FCK    + A+ 
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVG 664

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP-AVYKSLMTWS 576
           + K +   G+ PD+VTY TLI+GL + +R  DA+ +  +M +NGC  S    Y +++   
Sbjct: 665 ILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRL 724

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS-----IEEFLQKGEVENAIQGLLEMDFKLN 631
           C+      A  L    +  ++G   E+        I+   ++G ++ A   L EMD   +
Sbjct: 725 CKEGCLKQALLL----MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 780

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI-VTPPSCVKLIHGLCKRGYLDLAM 690
           +     YT  +IGLC+  Q+  A  +   +V  K + +T  +   LI    K   LD A+
Sbjct: 781 EVS---YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 837

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            +    ++ G    P V  Y +      K +K   A+ L   M   G
Sbjct: 838 TLLGLMVQRG--CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG 882



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 178/638 (27%), Positives = 297/638 (46%), Gaps = 84/638 (13%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           A+R    S  + + +IS L K    D     +DE  S         + +L  G  K G  
Sbjct: 323 AERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRI 382

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++A E   +M    C P++  YN +++   +      A  +   +V    +P++VT++++
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTII 442

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++GL K G+ + A+KM++ M +RG  P+  TYT ++ GLC+  R DEA+ +F +M    C
Sbjct: 443 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 502

Query: 235 SPDFVAYNALLNGFCKLRRVDEAL----------------ALLRSFEKDG---------- 268
           + D +AY +L+NG+CK  R  EA                 AL+  + K+G          
Sbjct: 503 TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562

Query: 269 ------FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                  VP + +Y+ ++DGL +  + DEA+ +   M      PDVV Y ++I GL +A 
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K K+A ++L  M + GI PD   YN L+  FC     D A  +   + K    P+  T+ 
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSV-GMFNALIDGLCKAGELEKANLLFYKMEI 441
            LI G+ +   + DA +L ++M + GC  S    +N +ID LCK G L++A LL   M  
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM-- 740

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                       G     +  +    +++ C  G + +A  +L   +E   L D ++Y +
Sbjct: 741 -----------TGHGVEANTVTYNIFIDRLCKEGRLDEASSLL---SEMDTLRDEVSYTT 786

Query: 502 LINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +I G CK   ++ A KL +E+  +KGL   S T+  LI+   +  R ++A  + G M Q 
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC+PS   Y  ++T  C+  K   A+ L+                  +E   +G V +++
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELF------------------DEMAVRGIVASSV 888

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                            YT+ + GLC  G+ KEAL + 
Sbjct: 889 S----------------YTVLIYGLCGQGRGKEALQVL 910



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 172/578 (29%), Positives = 280/578 (48%), Gaps = 60/578 (10%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T +  +  L ++G ++    M + M   G  P+ +TY +VI  LCQ+N+ D+A+ +  K 
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           K  G  P+   Y  L   FCK  R+ +AL + R+       P   +Y+ +I G  R    
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDC 242

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D A  + ++M E K+ PDV  Y ++I GL +A K   A ++L +M +RG+ PDT  +N++
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G C  G  ++A SL   + +R+  P+  T+  LI G+C+   VD A+ L ++   +G 
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V  ++ L DGLCK G +++A  L  +M  GK  T  L             +  T+++
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMS-GKGCTPNL------------VTYNTLID 409

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C A    KAY++L  L  SG +PD++TY  +++G CK G ++ ALK+ + +  +G  P
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             +TY  L+ GL R  R ++A  IF +M    CT     Y SL+   C+           
Sbjct: 470 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK----------- 518

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
                  S R  E+ K          V + I+G   +D          Y   + G C++G
Sbjct: 519 -------SSRTKEAQK----------VVDGIRGTPYIDV---------YNALMDGYCKEG 552

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           ++ E  N+F  +  C+  V       ++  GLCK G +D A   FL ++ +   + P V 
Sbjct: 553 RLDEIPNVFEDMA-CRGCVPNIKTYNIVMDGLCKHGKVDEAFP-FLESMHSAGCV-PDVV 609

Query: 709 NY-LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +Y ++   LF K +K   A  +L +M   G   DA  Y
Sbjct: 610 SYNIIIDGLF-KASKPKEARQVLDQMIQAGIPPDAVTY 646



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 183/412 (44%), Gaps = 22/412 (5%)

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           +RG    T+  N  ++   + G  D+  ++   +      P+++T+ ++I  +C+   +D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQG 454
            A  + +K +  G  P V ++  L    CK G L+ A      +EI +N P+        
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA------LEIFRNIPS-------- 223

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D  +   ++  +C       A + L ++ E    PD+ TYN LI+G CK    + 
Sbjct: 224 ----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDK 279

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A ++  E+  +G+ PD+VT+ ++++GL +  + E A  +   M +  C PS   Y +L++
Sbjct: 280 ASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLIS 339

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDF 633
             C+++    A  L  +++      D  +   + + L ++G ++ A + + EM  K    
Sbjct: 340 GLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTP 399

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L  Y   + GLC+  + ++A  +   LV    +    +   ++ GLCK G LD A+ + 
Sbjct: 400 NLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMV 459

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              LK G    P V  Y        +  +   A+H+   M S     DA  Y
Sbjct: 460 EGMLKRG--CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAY 509



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 5/243 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           + +IS L + N     ++ + E LR+G V      +  +I    K G  ++AL     M 
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               + +   YN  ++   ++     A ++  EM   + L + V+++ +I GL K+ + +
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLD 798

Query: 186 VAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            A K+  EM   +G+     T+ ++I    +  R DEA  L   M   GCSP  + YN +
Sbjct: 799 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +   CKL +VD+A  L       G V    SY+ LI GL    R  EA     +M     
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918

Query: 305 EPD 307
           E D
Sbjct: 919 EID 921



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 15/219 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K          +D +    V   +  + + I    K G  +   E+   + E
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD---EASSLLSE 774

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSKSGKT 184
            D   D   Y  V+    + +    A  +  EMV +   C+ +  TF+LLI+  +K+ + 
Sbjct: 775 MDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH-TFNLLIDAFTKTKRL 833

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A+ +L  M QRG  P+  TY +VI+ LC++++ D+A+ LF +M   G     V+Y  L
Sbjct: 834 DEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 893

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           + G C   R  EAL +L           + S  C ID L
Sbjct: 894 IYGLCGQGRGKEALQVLE---------EMASSDCEIDDL 923


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/555 (32%), Positives = 283/555 (50%), Gaps = 22/555 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L +    D  +Q LDE+   +    + V+  LI+G  K+G  + A      M E  
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PDV  Y +++    +      A  +  +M +    P+ V ++ L+NGL K  + E   
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L+EM + G  P+ F+Y  V++ LC+  + +EA ++  KM +  C PD V YN+L++GF
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK+ ++DEA  LL         P + +Y+ LI G  RA R  +AY     MF+  I PD+
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++ GL +AGK+++A +LL  M E+   PD   Y+ L+ G C LG +D AR L   
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +R   PN  TF  +I G C+ G VD+  K+   M++  C P V  ++ LIDG CKA  
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++ A  +     +G +P              DKAS  +M+E  C+ G + +A +++  + 
Sbjct: 458 MQDAFAI-----LGISP--------------DKASYSSMLEGLCSTGKVEEAQEVMDLMT 498

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P    Y  +I G C V   + ALK+ + +  +G  P+  TY  LINGL +  R E
Sbjct: 499 KQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE 558

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-- 606
           DA  +   M + GC P  A Y SL+   C+  K   A+  + + +RD     D+   +  
Sbjct: 559 DAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCF-KTMRDSGCEPDKLAYNIL 617

Query: 607 IEEFLQKGEVENAIQ 621
           I  F Q G VE AI+
Sbjct: 618 ISGFCQSGNVEKAIE 632



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 254/476 (53%), Gaps = 21/476 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+++ L K N  +   + L+E+        +  +  +++   + G  E+A +   KM E
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV  YN++++   +      A  +  +MV   C P ++T++ LI G S++ +   
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +++++M + GI P+  TY  ++ GLC+  + +EA+ L   M +  C+PD V Y+ L+N
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CKL +VD+A  LL    + G  P L +++ +IDG  +A + DE +     M E    P
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV Y  +I G  +A +++DA  +L      GI PD   Y+++++G C  G +++A+ + 
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVM 494

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + K+   P +  + ++I G+C     D+A K+   M + GC P++  ++ LI+GLCK 
Sbjct: 495 DLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKT 554

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
             +E A N+L   +E G  P              D A+  ++++ +C    +  AY+   
Sbjct: 555 KRVEDAINVLDVMLEKGCVP--------------DVATYTSLIDGFCKINKMDAAYQCFK 600

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            + +SG  PD + YN LI+GFC+ GN+  A+++ + +  KG  PD+ TY +L+  L
Sbjct: 601 TMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 29/249 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN----------------AVLNIA 143
            F  +I G+ K G  ++  +    MKE  C PDV  Y+                A+L I+
Sbjct: 409 TFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGIS 468

Query: 144 FRKQLFLLALA-------------VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
             K  +   L              V   M K  C P    ++L+I GL    + + A+KM
Sbjct: 469 PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKM 528

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M++RG  PN +TY+I+I+GLC+  R ++A  +   M + GC PD   Y +L++GFCK
Sbjct: 529 LQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           + ++D A    ++    G  P   +Y+ LI G  ++   ++A    + M E+   PD   
Sbjct: 589 INKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648

Query: 311 YGVMIRGLS 319
           Y  ++R L+
Sbjct: 649 YFSLMRSLT 657



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 6   NEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS 65
           +E L +L  ++  E   EP L   + + + + + KTK  +          ++  +   A+
Sbjct: 523 DEALKMLQVMS--ERGCEPNL--YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
            +++I    K N  D  +Q    +R          + +LISG+ + G+ EKA+E    M 
Sbjct: 579 YTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLML 638

Query: 126 EFDCQPDVYIYNAVL 140
           E  C PD   Y +++
Sbjct: 639 EKGCNPDAATYFSLM 653


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 196/613 (31%), Positives = 310/613 (50%), Gaps = 14/613 (2%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++   K G CE+A   F ++K     PDV  Y+ ++N   R   +  AL V  EM    
Sbjct: 15  LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C PN+ T++ L++ L K+G+ + A+++L EM   G +P+  TY  +IS L +  R  EA+
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M++ GC PD   YN+L+ G  K+ R  +A+ LL   E+ G  P + +YS LI GL
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     +A+  +++M     +PD + +  ++  L +AG+V DA++LL +M+ERG+ P  
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YNALI GF  +G L +A +L  E+ +    P+  T++ LI G+ +   +D+A ++  K
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           MEK GC P    +N LI+GL KAG L  A  LF +M+           S+G N   D  +
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK-----------SKGCN--PDVVT 361

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T++     A  +  A  +  ++   G  PD+ TY S+I    K G ++ A +LF E++
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            KGL PD +TY   +N L R  R ++A +IF  M ++G  P  A Y +L+    + ++  
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            A  L  + +      D        E L   G V+ A + L   + K      + Y   +
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             L + G+V EA N    L E        S   LI  L + G +D A ++     K G  
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601

Query: 703 LRPRVCNYLLRSL 715
           L PR  + L+R L
Sbjct: 602 LSPRSYSNLVRKL 614



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 252/496 (50%), Gaps = 22/496 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS L K       +    E+R       +  +  LI G  KVG  +KA+E   +M+   
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PDV  Y++++    +    + A  ++ EM +    P+ +TF+ L++ L K+G+ + A+
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++LDEM +RG+ P   TY  +I+G  ++    EAY L  +MK +GC PD V Y+ L+ G 
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K  ++DEA  +L+  EK+G  P   +Y+ LI+GL +A   ++A   + +M  +   PDV
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I  L +A +V+ A  L  +M   GI PD + Y ++I      G +D A  L  E
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   P+  T+   +  + R G   +A+K+F  M+++G  P V  ++AL+ GL K  E
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479

Query: 429 LEKA-NLLFYKMEIG------KNPTLFLRLSQGGN--RVHD-------------KASLQT 466
           ++ A  LL   +E G      K       L+  GN    H+              +S   
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++    AG + +A+  L  L E G  PDI++Y+SLI+   + G I+ A +L +E+  +G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599

Query: 527 LRPDSVTYGTLINGLQ 542
           L+    +Y  L+  LQ
Sbjct: 600 LKLSPRSYSNLVRKLQ 615



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 278/564 (49%), Gaps = 16/564 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+ L +   ++   + + E+++         +  L+    K G  ++AL    +M
Sbjct: 46  SYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM 105

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++  C PDV  YN +++   +      A  ++ EM +  C+P+  T++ LI GL K G++
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A+++L+EM + G  P+  TY+ +I+GL +     +A++LF +MK  G  PD + + AL
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++   K  RVD+AL LL   ++ G  P + +Y+ LI G  +     EAY    +M     
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +PDVV Y  +I GL +A ++ +A ++L  M + G  PDT  YN LI G    GLL+ A  
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +  +   P+  T++ LI  + +   V+ A  LF +ME  G  P +  + ++I  L 
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KAG+++ A+ LF +M             +G     D  +    +      G   +A KI 
Sbjct: 406 KAGQVDDADRLFSEM-------------RGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             + ESG LPD+ TY++L+ G  K   ++ A  L KEL  +G   DS+ +   +  L   
Sbjct: 453 EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW 512

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              ++A  +       G  P  + Y +L+    +  + S AF+  L+ L++  G+ D   
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNT-LEDLKEQGGKPDIVS 571

Query: 605 KS--IEEFLQKGEVENAIQGLLEM 626
            S  I    Q G+++ A + L EM
Sbjct: 572 YSSLISALGQTGQIDTAFELLEEM 595



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 244/490 (49%), Gaps = 25/490 (5%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP+ V YN+LLN   K  + +EA  L    +   + P + SYSCLI+ L RA +++ A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M  +  +P++  Y  ++  L +AG+  +A++LL++MR+ G VPD   YN LI    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G L +A +L  E+ +R  +P+T T+  LI G+ + G    A +L  +ME+ GC P V 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 415 MFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQGGNRVHDKASL--- 464
            +++LI GL K GE  KA  LF +M+  G+ P       L   L + G RV D   L   
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG-RVDDALELLDE 244

Query: 465 -------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                          ++  +   G + +AY +L ++  +G  PD++TY+ LI G  K   
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A ++ K+++ +G  PD++TY TLINGL +     DA R+F +M   GC P    Y +
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKL 630
           L+T   +  +   A  L+ +        D  +  SI   L K G+V++A +   EM  K 
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               +  Y  +L  L + G+ KEA  IF  + E   +    +   L+ GL K   +D A 
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484

Query: 691 DVFLYTLKNG 700
            +    ++ G
Sbjct: 485 GLLKELIEQG 494



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 189/392 (48%)

Query: 48  FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           F+ F    +R R     + +A++  L K    D   + LDE++   V      +  LI+G
Sbjct: 204 FKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAG 263

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + KVGD  +A     +MK   C+PDV  Y+ ++    +      A  V  +M K  C P+
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPD 323

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            +T++ LINGL K+G    A ++ D M  +G  P+  TY+ +I+ L +  R + A  LF 
Sbjct: 324 TITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFE 383

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M+  G  PD   Y +++    K  +VD+A  L       G  P + +Y+  ++ L R  
Sbjct: 384 EMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGG 443

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R+ EA   +  M E  + PDV  Y  ++ GLS+  +V DA  LL ++ E+G   D+  ++
Sbjct: 444 RFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFD 503

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             ++     G +D+A  L      +   P   ++  LI  + + G V +A      +++ 
Sbjct: 504 ECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQ 563

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G  P +  +++LI  L + G+++ A  L  +M
Sbjct: 564 GGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 135/272 (49%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D ++S   +     +  LI+   K    E A   F +M+    QPD++ Y +++ +  +
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A  ++ EM      P+++T++  +N L + G+ + A K+ ++M + G+LP+  T
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++ GL +    D+A  L  ++ + GC+ D + ++  L        VDEA  LL+   
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P   SY+ LID L +A R  EA+     + E+  +PD+V Y  +I  L + G++ 
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            A +LL +M +RG+      Y+ L++   D G
Sbjct: 587 TAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKM 124
           S +I+ L K    +      +E+ S  V +  D+F    +I+   K G  + A   F +M
Sbjct: 363 STLITALGKAARVESACVLFEEMES--VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +     PDV  YNA LN   R   F  A  ++ +M +   LP++ T+  L+ GLSK+ + 
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A  +L E+ ++G   +   +   +  L      DEA+ L       G  P   +YNAL
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++   K  RV EA   L   ++ G  P + SYS LI  L +  + D A+    +M +  +
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600

Query: 305 EPDVVLYGVMIRGLSEAG 322
           +     Y  ++R L + G
Sbjct: 601 KLSPRSYSNLVRKLQDWG 618


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 192/669 (28%), Positives = 329/669 (49%), Gaps = 32/669 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G    G C  A+  F +M +  C PD   YN ++N   +      A+ +  EMV   
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+ +++ +++G  K+ + E A+ +L++M  RG  P+  +YT VI+GLC++++ DEA 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           R+  KM   GC P+ + Y  L++GFC++  +D A+ L+R   + G+ P   +Y+ ++ GL
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 284 FRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              ++ D A   +++M E     PDV  Y  ++  L ++GKV DA +L+  M  +G  P+
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y++L+ G C  G LD+A +L   + +    PN  T+  +I G C+ G +D+A  L  
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKA--------------NLLFY---------KM 439
           +M   GC P+V  +  L+D  CK G+ E A              NL  Y         K 
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKD 374

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E+ +   L   + Q G  V +  S  T++   C A  +H+   +L Q+  +  +PDI+T+
Sbjct: 375 EVERACQLLSSMIQKGC-VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 433

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP- 558
           N++I+  CK   ++ A +LF  +Q  G  P+ VTY +L++GL +  R + A  +  +M  
Sbjct: 434 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTR 493

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + GC+P    Y +++   C+ ++   A+ L+LQ L D    DD +   +   L K    +
Sbjct: 494 KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 553

Query: 619 AIQGLLEMDFKLNDFQLAP--YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
               +LE+  K N F      Y   + G C+ G + +AL I  +L+   +     +    
Sbjct: 554 EANNVLELMLK-NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I  L KRG L  A ++    L+ G +      N LL+   F   ++   A  L   M+  
Sbjct: 613 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKG--FCDASRTEDAVDLFEVMRQC 670

Query: 737 GYDLDACLY 745
           G + D   Y
Sbjct: 671 GCEPDNATY 679



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 179/677 (26%), Positives = 330/677 (48%), Gaps = 60/677 (8%)

Query: 52  IWAAKRKRLRS----FASNSAVISMLLKPNGFDLYWQTLDEL--RSGNVSVVSDVFFVLI 105
           +W  ++  +R       S + VI+ L K +  D   + +D++  R    +V++  +  L+
Sbjct: 99  LWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT--YGTLV 156

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL-NC 164
            G+ +VGD + A+E   KM E   +P+   YN +++     +    AL ++ EM +  +C
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P++ T+S +++ L KSGK + A ++++ M  +G  PN  TY+ ++ GLC+  + DEA  
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 276

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  +M  SGCSP+ V YN +++G CKL R+DEA  LL      G  P + +Y+ L+D   
Sbjct: 277 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 336

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  + ++A      M E+   P++  Y  ++    +  +V+ A +LLS M ++G VP+  
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN +I G C    + +   L  ++   + +P+  TF  +I  MC+   VD A +LFN +
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKA 462
           +++GC P++  +N+L+ GLCK+   ++A  L  +M  + G +P              D  
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP--------------DII 502

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+++  C +  + +AYK+ +Q+   G  PD +TY+ +I+  CK   ++ A  + + +
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 562

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              G  P ++TYGTLI+G  +    + A  I   +   G  P    +   + W  +R   
Sbjct: 563 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR--- 619

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                          GR  ++ + +E  L+ G V + +                 Y   L
Sbjct: 620 ---------------GRLRQAGELLETMLRAGLVPDTVT----------------YNTLL 648

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGF 701
            G C   + ++A+++F V+ +C       +   L+ H + K+ Y DL  +V    +  GF
Sbjct: 649 KGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGF 708

Query: 702 ILRPRVCNYLLRSLLFS 718
            L   + + L  S+  S
Sbjct: 709 KLNHELSSKLEASVSAS 725



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 187/401 (46%), Gaps = 27/401 (6%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  +G+      + ++++G CD G    A  L      +   P++ T+  +I G+ ++  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDA-VLHFREMSKTCPPDSVTYNTMINGLSKSDR 59

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +DDA +L  +M   G  P+V  +N ++ G CKA  +E A  L  +M +   P   +  + 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 454 GGN------------RVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             N            RV DK           +  T+V+ +C  G +  A +++ ++ E G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKG-LRPDSVTYGTLINGLQRVDREEDA 550
             P+ ITYN++++G C    ++ AL+LFKE++  G   PD  TY T+++ L +  + +DA
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEE 609
            R+   M   GC+P+   Y SL+   C+  K   A +L  +  R     +  +  + I+ 
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
             + G ++ A   L EM        +  YT+ L   C+ G+ ++A+ +  V+VE   +  
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +   L+   CK+  ++ A  +    ++ G +  P V +Y
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV--PNVVSY 398



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 22/338 (6%)

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M + G     G+  +++ GLC AG+   A L F +M     P              D  +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPP--------------DSVT 46

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             TM+     +  +  A ++L ++ ++G  P++ +YN++++GFCK   +  AL L +++ 
Sbjct: 47  YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           ++G  PD V+Y T+INGL ++D+ ++A R+  +M Q GC P+   Y +L+   CR     
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLN-DFQLAPYTIW 641
            A  L  +        +  +  +I   L  G ++++A+Q   EM+   +    +  Y+  
Sbjct: 167 GAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTI 226

Query: 642 LIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           +  L + G+V +A  +   +V   C   V   S   L+HGLCK G LD A  +     ++
Sbjct: 227 VDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS--SLLHGLCKAGKLDEATALLQRMTRS 284

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           G    P +  Y        K  +   AYHLL  M   G
Sbjct: 285 G--CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 211/719 (29%), Positives = 338/719 (47%), Gaps = 44/719 (6%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
            ++  T+ + + K+     G   F    +R       + + +I  L K    +   +   
Sbjct: 216 IVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 275

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFR 145
           ++ S +       + VLI+G  KVG  ++A E   +M  K  D  P++  YN+ L+   +
Sbjct: 276 DMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 335

Query: 146 KQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           + +   A  +   +    L   P+ VTFS LI+GL K G+ + A  + D+M   G +PN 
Sbjct: 336 QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 395

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +++GLC+ ++ + A+ +   M D G +PD + Y+ L++ FCK  RVDEAL LL  
Sbjct: 396 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 455

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM-FEEKIEPDVVLYGVMIRGLSEAG 322
               G  P + +++ +IDGL ++ R  EA+  +  M  +  + PD + Y  +I GL   G
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV--EIWKRDSLPNTHT 380
           +   A  LL  M +    PDTY +N  I G   LG  D +R+LQV   + + + +P+  T
Sbjct: 516 RAGQAEALLDAMPD----PDTYAFNCCINGLSKLG--DVSRALQVYNRMLELELVPDKVT 569

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           F ILI G C+ G  + A  LF +M      P V  F ALIDGLCKAG++E A ++L    
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            +G  P +               +   +V   C +G I +A + L ++  SG +PD ITY
Sbjct: 630 NLGVPPNVV--------------TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 675

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            SL+   C+    + AL+L  EL+  G  PD+VTY  L++GL +  + E A  +  +M  
Sbjct: 676 GSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVG 735

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--------IEEFL 611
            G  P    Y +L+   C+      A  L      D+S R               I    
Sbjct: 736 KGHHPDVVTYNTLIDSLCKAGDLEEARRLH----GDMSSRVSRCCVPNVVTYSVLINGLC 791

Query: 612 QKGEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           + G ++ A + + EM  K  D    +  Y  +L GLC+   + EA  +   L +    V+
Sbjct: 792 KVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVS 851

Query: 670 PPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           P +     LI GLCK G  D A +VF   +  G++      N L+  L  +   ++ HA
Sbjct: 852 PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHA 910



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 178/604 (29%), Positives = 308/604 (50%), Gaps = 31/604 (5%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F   I+G  K+GD  +AL+ + +M E +  PD   +N ++  A +   F  A A++ EM
Sbjct: 534  AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 593

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            V  N  P+++TF  LI+GL K+G+ E A  +LD M   G+ PN  TY  ++ GLC+  R 
Sbjct: 594  VAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRI 653

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +EA +   +M  SGC PD + Y +L+   C+  R D+AL L+   +  G+ P   +Y+ L
Sbjct: 654  EEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNIL 713

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR---E 336
            +DGL+++ + ++A     +M  +   PDVV Y  +I  L +AG +++A +L  DM     
Sbjct: 714  VDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVS 773

Query: 337  RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR--DSLPNTHTFTILICGMCRNGMV 394
            R  VP+   Y+ LI G C +G +D+AR L  E+ ++  D LPN  T+   + G+C+  M+
Sbjct: 774  RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833

Query: 395  DDAQKLFNKMEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
             +A +L   +        P    F+ LIDGLCK G+ ++A  +F  M             
Sbjct: 834  AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM------------- 880

Query: 453  QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
              G  V +  +   ++   C    + +A+ ++  + + G  PD+ITY+ L++ FCK  ++
Sbjct: 881  IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHV 940

Query: 513  NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP-QNGCTPSPAVYKS 571
            + AL+L   +  +G  P+ VT+ ++I+GL + D+  +AF++F  M  ++G  P    Y +
Sbjct: 941  DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCT 1000

Query: 572  LMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFK 629
            L+        F   ++   + L D +   D  +       L K G+V  A+  +LE++  
Sbjct: 1001 LIDG-----LFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELV 1055

Query: 630  LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
             +      + I + G C+ G  ++A  +F  +V         +   LI GLCK G ++  
Sbjct: 1056 PDKVT---FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAT 1112

Query: 690  MDVF 693
             D+ 
Sbjct: 1113 WDIM 1116



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 204/739 (27%), Positives = 340/739 (46%), Gaps = 79/739 (10%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPN----GFDLYWQTLD-ELRSGNVSV 96
           N ++G +F+ WAA     + +  S +  +++L+K        DL+   L    R  + + 
Sbjct: 90  NAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFT- 148

Query: 97  VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
               +  L+   YK G D E+ L  F +++       V  YN VL    R      AL +
Sbjct: 149 ----YSTLLRATYKAGGDVERTLGFFRRIRSS--SRSVADYNIVLQSLCRAGETARALEI 202

Query: 156 YY-EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +  EM +    P IVT++ +INGL KS +    +++ +E+ +RG  P+  TY  +I  LC
Sbjct: 203 FRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLC 262

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG--FVPR 272
           +    +EA RL   M    C P+ V Y+ L+NG CK+ R+DEA  L++   +     +P 
Sbjct: 263 KAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 322

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEE--KIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           + +Y+  +DGL +     EA    R + +   ++ PD V +  +I GL + G++ +A  +
Sbjct: 323 IITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 382

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             DM   G VP+   YNAL+ G C    +++A ++   +  +   P+  T+++L+   C+
Sbjct: 383 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 442

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI--GKNP--- 445
              VD+A +L + M   GC P+V  FN++IDGLCK+    +A  +F  M +  G  P   
Sbjct: 443 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKI 502

Query: 446 ---TLFLRLSQGGNRVHDKASLQTMVE------QYCTAGL-----IHKAYKILMQLAESG 491
              TL   L + G     +A L  M +        C  GL     + +A ++  ++ E  
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELE 562

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV------- 544
            +PD +T+N LI G CK GN   A  LF+E+  K L+PD +T+G LI+GL +        
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622

Query: 545 ----------------------------DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
                                        R E+A +   +M  +GC P    Y SL+   
Sbjct: 623 DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 682

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           CR  +   A  L +  L+      D    +I  +   + G+ E AI  L EM  K +   
Sbjct: 683 CRASRTDDALQL-VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPD 741

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMD 691
           +  Y   +  LC+ G ++EA  +   +    +    P+ V    LI+GLCK G +D A +
Sbjct: 742 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARE 801

Query: 692 VFLYTLKNGFILRPRVCNY 710
           +    ++    + P +  Y
Sbjct: 802 LIQEMMRKSCDVLPNIITY 820



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 10/280 (3%)

Query: 84   QTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
            + +  LR G++ V  D   F  LI G  K G  ++A   F  M      P+V  YN ++N
Sbjct: 838  ELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMN 897

Query: 142  IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
               +      A A+   MV     P+++T+S+L++   K+   + A+++L  M  RG  P
Sbjct: 898  GLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTP 957

Query: 202  NKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            N  T+  +I GLC+ +++ EA+++F  M    G +PD + Y  L++G  +     +A  L
Sbjct: 958  NVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVL 1017

Query: 261  LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
            L +       P   +++C I+GL  +K  D + A +R M E ++ PD V + ++I G  +
Sbjct: 1018 LDAMPD----PDTYAFNCCINGL--SKLGDVSRALHR-MLELELVPDKVTFNILIAGACK 1070

Query: 321  AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            AG  + A  L  +M  + + PD   + ALI G C  G ++
Sbjct: 1071 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 201/714 (28%), Positives = 339/714 (47%), Gaps = 68/714 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  S ++++  LLK N  +L+W+  D + +  V      +  +IS + KVG+ + A    
Sbjct: 179 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 238

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M E  C P++  YN ++    R +L   A+ +   MV    +P++ T+ +LING    
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 298

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            ++  A  ML EM   G+ P   TY  +I G  +    ++A+R+  +M   G   + + +
Sbjct: 299 KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIW 358

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N LLNG CK  ++++AL +++   + G  P   +YS LI+G  R +    A+    +M +
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418

Query: 302 EKIEPDVVLYGVMIRGL-----------------------------------SEAGKVKD 326
            K+ P V+ Y V+I GL                                   ++ G+V++
Sbjct: 419 RKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE 478

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           +  +L  MRE+GI+PD +CYN+LI GFC    +++AR+  +E+ +R   PN HT+   I 
Sbjct: 479 SRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 538

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G  + G ++ A + FN+M   G  P+VG++ ALI+G CK G + +A  +F          
Sbjct: 539 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF---------- 588

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
              R       + D  +   ++      G +H+A+ I  +L E G LP+  TYNSLI+G 
Sbjct: 589 ---RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK GN++ A +L +E+ +KG+ PD VTY  LI+GL +    E A  +F  +   G TP+ 
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAI---QG 622
             Y +++   C+ +  + AF L  + L      D      I  F  K E  E A+   Q 
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +LE  F         +   + G C+ G+++EA ++   ++E + I    +   LI   CK
Sbjct: 766 MLEKGFA----STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCK 821

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
            G +  A  ++L   +   +   +    LL            H YH +  M  V
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLL------------HGYHNIGNMSEV 863



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/648 (26%), Positives = 301/648 (46%), Gaps = 15/648 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I   ++    +  ++  DE+ +  +     ++  L++G  K G  EKALE   +M E
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   Y+ ++    R Q    A  +  EM K    P ++T+S++INGL + G  + 
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +L EM   G+ PN   YT +++   +  R +E+  +  +M++ G  PD   YN+L+ 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCK +R++EA   L    +    P   +Y   IDG  +A   + A  ++ +M    + P
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 563

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +V +Y  +I G  + G V +A  +   +  R ++ D   Y+ LI G    G + +A  + 
Sbjct: 564 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 623

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++  LPN  T+  LI G C+ G VD A +L  +M   G  P +  +N LIDGLCKA
Sbjct: 624 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 683

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           GE+E+A  LF  +E             G     +  +   MV+ YC +     A+++L +
Sbjct: 684 GEIERAKNLFDDIE-------------GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G  PD   YN ++N  CK      AL LF+E+  KG    +V++ TLI G  +  +
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGK 789

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMK 605
            ++A  +  +M +    P+   Y SL+  +C+      A  LWL+   R++         
Sbjct: 790 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 849

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            +  +   G +        EM  K  +     Y + +   C++G V EA  +   ++   
Sbjct: 850 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
             ++  +   LI  LCK+      + +     ++GF L    C+ + R
Sbjct: 910 MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIAR 957



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 298/631 (47%), Gaps = 88/631 (13%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           RS N S  S +F +L+  Y K+G   +A+  F   K F+ +P +   N++L    +    
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
            L   V+  M     LP++ T++ +I+   K G  + A ++L EM ++G  PN  TY ++
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I GLC+    DEA  L   M D G  PD   Y+ L+NGFC  +R  EA  +L      G 
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +Y+ LIDG  R    ++A+    +M    IE +++++  ++ G+ +AGK++ A++
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           ++ +M E+G+ PD+  Y+ LI+G C    + +A  L  E+ KR   P   T++++I G+C
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 390 R-----------------------------------NGMVDDAQKLFNKMEKAGCFPSVG 414
           R                                    G V++++ +  +M + G  P V 
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N+LI G CKA  +E+A    Y ME+     L  RL    +      +    ++ Y  A
Sbjct: 497 CYNSLIIGFCKAKRMEEART--YLMEM-----LERRLRPNAH------TYGAFIDGYSKA 543

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A +   ++   G LP++  Y +LI G CK GN+  A  +F+ +  + +  D  TY
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 603

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             LI+GL R  +  +AF IF ++ + G  P+   Y SL++ SC+                
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK---------------- 647

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                             +G V+ A Q L EM  K  +  +  Y I + GLC+ G+++ A
Sbjct: 648 ------------------QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689

Query: 655 LNIFSVLVECKAIVTPPSCV---KLIHGLCK 682
            N+F   +E + +   P+CV    ++ G CK
Sbjct: 690 KNLFDD-IEGRGLT--PNCVTYAAMVDGYCK 717



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 227/465 (48%), Gaps = 16/465 (3%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  +   I GY K G+ E A   F +M      P+V IY A++    ++     A +V+ 
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            ++    L ++ T+S+LI+GLS++GK   A  +  E+ ++G+LPN FTY  +ISG C+  
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             D+A +L  +M   G +PD V YN L++G CK   ++ A  L    E  G  P   +Y+
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++DG  ++K    A+    +M    + PD  +Y V++    +  K + A+ L  +M E+
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 769

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G    T  +N LI+G+C  G L +A  L  E+ ++  +PN  T+T LI   C+ GM+ +A
Sbjct: 770 GFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 828

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
           ++L+ +M++    P+   + +L+ G    G + + + LF +M   G  P           
Sbjct: 829 KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP----------- 877

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              DK +   M++ YC  G + +A K+  ++   G    +  Y++LI   CK       L
Sbjct: 878 ---DKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           KL  E+   G R    T   +  G Q     ++A  +   M + G
Sbjct: 935 KLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 185/400 (46%), Gaps = 1/400 (0%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  N    F  F +   R+ L+   + S +I  L +       +    EL+   +   + 
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 636

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LISG  K G+ +KA +   +M      PD+  YN +++   +      A  ++ ++
Sbjct: 637 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN VT++ +++G  KS     A ++L+EM  RG+ P+ F Y ++++  C+  + 
Sbjct: 697 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  LF +M + G +   V++N L+ G+CK  ++ EA  LL    +  F+P   +Y+ L
Sbjct: 757 EKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 815

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +A    EA   + +M E  + P    Y  ++ G    G + +   L  +M  +GI
Sbjct: 816 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 875

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y  +I  +C  G + +A  L+ EI  +    +   +  LI  +C+     +  K
Sbjct: 876 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLK 935

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           L N++ ++G    +   + +  G   AG +++A  +   M
Sbjct: 936 LLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 1/305 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  ++ GY K  +   A +   +M      PD +IYN +LN   +++ F  AL ++ EM
Sbjct: 707  TYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++     + V+F+ LI G  KSGK + A  +L+EM ++  +PN  TYT +I   C+    
Sbjct: 767  LEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 825

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             EA RL+L+M++    P    Y +LL+G+  +  + E  AL       G  P   +Y  +
Sbjct: 826  GEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVM 885

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            ID   R     EA     ++  + +   V  Y  +I+ L +  +  + +KLL+++ E G 
Sbjct: 886  IDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGF 945

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
                   + + +GF   G +D+A  +   + K   + NT +   L+ G       +D+  
Sbjct: 946  RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 1005

Query: 400  LFNKM 404
            L  +M
Sbjct: 1006 LLKQM 1010


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 274/492 (55%), Gaps = 20/492 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ G+ KVG  ++AL+ F    +    PDV  YNA++N   +      A  +   MV
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC-QINRA 219
             + +P++VT++ L+NGL K+G+ + A +ML  +  +G  PN  TY+ +ISGLC ++ R 
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEA-RML--IVDKGFSPNVITYSTLISGLCRELRRL 239

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A +L  KM  +GC PD V+YNAL++G  + + V EAL L  S  + G+ P + +Y+ L
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +  R +EA+  +  + +  +EPD + Y V I GL +AG+V+DA+ +L DM E+G 
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD   +NA+I G C    +D+A  L   +  +   PN  +F  LICG CR G    A  
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA---GELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
            F +M K G  P+V  +N L+DGLCKA   G +++A  LF  M           + +G  
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM-----------IEKG-- 466

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           RV D  +   +++    AG +  A ++L  +   G +P++ TYNSLI+G C +  ++ AL
Sbjct: 467 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEAL 526

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +LF  +  KG  PD++TYGT+I+ L + +  + A  +F    + G  P+  +Y SL+   
Sbjct: 527 ELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586

Query: 577 CRRRKFSLAFSL 588
           C   +   A  L
Sbjct: 587 CAVARVDEALKL 598



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 187/598 (31%), Positives = 286/598 (47%), Gaps = 56/598 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F + ISG  +      A   F  M++    P+   YNA+L+          A A+Y  M+
Sbjct: 53  FNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI 112

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P++VT++ L++G  K GK + A+K+ D   +RG +P+  TY  +I+G C+ ++ D
Sbjct: 113 KAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 172

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA R+  +M      PD V YN+L+NG CK  RVDEA  L+      GF P + +YS LI
Sbjct: 173 EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLI 229

Query: 281 DGLFRA-KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            GL R  +R + A     KM     +PD+V Y  +I GL+    V +A+KL   +  +G 
Sbjct: 230 SGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGY 289

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI G      +++A  L   + K    P+  T+T+ I G+C+ G V+DA  
Sbjct: 290 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 349

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           +   M++ GC P V   NA+I+GLCK   +++A +L   ME  G +P             
Sbjct: 350 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP------------- 396

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV---GNINGA 515
            +  S  T++   C AG   KA     ++ + G  P ++TYN L++G CK    G I  A
Sbjct: 397 -NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + LF  +  KG  PD VTY  LI+GL +  + +DA R+ G M   GC P+   Y SL++ 
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C   K                   DE+++     ++KG V + I               
Sbjct: 516 LCGLDKV------------------DEALELFVAMVEKGCVPDTIT-------------- 543

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             Y   +  LC+   V +AL +F   +E   + T      LI GLC    +D A+ + 
Sbjct: 544 --YGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 175/579 (30%), Positives = 294/579 (50%), Gaps = 24/579 (4%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PD Y    +L  +  K   +     + E + +  L +I TF++ I+GL ++ +   A  
Sbjct: 13  SPDAYTVGILLR-SLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQT 71

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + D M + G  PN+ TY  ++SGLC   R  +A  L+ +M  +G SPD V YN LL+GFC
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K+ ++DEAL +     K GFVP + +Y+ LI+G  +A + DEA    ++M  E + PDVV
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC-DLGLLDQARSLQVE 368
            Y  ++ GL + G+V +A  L+ D   +G  P+   Y+ LI G C +L  L+ AR L  +
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      P+  ++  LI G+ R   V +A KLF  + + G  P V  +N LIDGL K   
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + +A  LF  + + G  P              D  +    ++  C AG +  A  +L  +
Sbjct: 309 VNEAFELFSGLVKHGLEP--------------DAITYTVFIDGLCKAGRVEDALLMLKDM 354

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G +PD++++N++ING CK   ++ A  L   ++ KG  P+++++ TLI G  R  + 
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 414

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR---KFSLAFSLWLQYLRDISGRDDESM 604
           + A   F +M + G  P+   Y  L+   C+ R   +   A +L+   +      D  + 
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474

Query: 605 KSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            ++ + L K G++++A + L  M+ K     +  Y   + GLC   +V EAL +F  +VE
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVE 534

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              +    +   +I  LCK+  +D A+ +F  +L+ G +
Sbjct: 535 KGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVV 573



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 38/236 (16%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S++AVI+ L K    D     L  + +   S  +  F  LI G  + G  +KA+ +F +M
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424

Query: 125 KEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +   +P V  YN +++    A ++     A+ ++  M++   +P++VT+S LI+GL K+
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK + A ++L  M  +G +PN +TY  +ISGLC +++ DEA  LF+ M + GC PD + Y
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 242 N-----------------------------------ALLNGFCKLRRVDEALALLR 262
                                               +L++G C + RVDEAL LL+
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 194/696 (27%), Positives = 337/696 (48%), Gaps = 50/696 (7%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC------- 114
           S  S ++++  LLK N  +L+W+  D + +  V      +  +IS + KVG+        
Sbjct: 188 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 247

Query: 115 ----------EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
                     ++A+E    M +    PD+Y Y+ ++N    ++    A  +  EM+ +  
Sbjct: 248 LEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 307

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P  +T++ LI+G  + G  E A ++ DEM   GI  N   +  +++G+C+  + ++A  
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +  +M + G  PD   Y+ L+ G C+ + +  A  LL   +K    P + +YS +I+GL 
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R        A  R+M    ++P+ V+Y  ++   ++ G+V+++  +L  MRE+GI+PD +
Sbjct: 428 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 487

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
           CYN+LI GFC    +++AR+  +E+ +R   PN HT+   I G  + G ++ A + FN+M
Sbjct: 488 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
              G  P+VG++ ALI+G CK G + +A  +F             R       + D  + 
Sbjct: 548 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF-------------RFILSRRVLQDVQTY 594

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++      G +H+A+ I  +L E G LP+  TYNSLI+G CK GN++ A +L +E+ +
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG+ PD VTY  LI+GL +    E A  +F  +   G TP+   Y +++   C+ +  + 
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 714

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAI---QGLLEMDFKLNDFQLAPYTI 640
           AF L  + L      D      I  F  K E  E A+   Q +LE  F         +  
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA----STVSFNT 770

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C+ G+++EA ++   ++E + I    +   LI   CK G +  A  ++L   +  
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
            +   +    LL            H YH +  M  V
Sbjct: 831 VMPTAKTYTSLL------------HGYHNIGNMSEV 854



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/643 (27%), Positives = 301/643 (46%), Gaps = 21/643 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I   ++    +  ++  DE+ +  +     ++  L++G  K G  EKALE   +M E
Sbjct: 315 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   Y+ ++    R Q    A  +  EM K    P ++T+S++INGL + G  + 
Sbjct: 375 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +L EM   G+ PN   YT +++   +  R +E+  +  +M++ G  PD   YN+L+ 
Sbjct: 435 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 494

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCK +R++EA   L    +    P   +Y   IDG  +A   + A  ++ +M    + P
Sbjct: 495 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLP 554

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +V +Y  +I G  + G V +A  +   +  R ++ D   Y+ LI G    G + +A  + 
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++  LPN  T+  LI G C+ G VD A +L  +M   G  P +  +N LIDGLCKA
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           GE+E+A  LF  +E             G     +  +   MV+ YC +     A+++L +
Sbjct: 675 GEIERAKNLFDDIE-------------GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G  PD   YN ++N  CK      AL LF+E+  KG    +V++ TLI G  +  +
Sbjct: 722 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGK 780

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMK 605
            ++A  +  +M +    P+   Y SL+  +C+      A  LWL+   R++         
Sbjct: 781 LQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTS 840

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVEC 664
            +  +   G +        EM  K  +     Y + +   C++G V EA  +   +LV+ 
Sbjct: 841 LLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 900

Query: 665 KAIVTP-----PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             + +      P+C  +  G    G +D A +V    +K G++
Sbjct: 901 MPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWV 943



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 234/467 (50%), Gaps = 22/467 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  +   I GY K G+ E A   F +M      P+V IY A++    ++     A +V+ 
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            ++    L ++ T+S+LI+GLS++GK   A  +  E+ ++G+LPN FTY  +ISG C+  
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             D+A +L  +M   G +PD V YN L++G CK   ++ A  L    E  G  P   +Y+
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++DG  ++K    A+    +M    + PD  +Y V++    +  K + A+ L  +M E+
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 760

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G    T  +N LI+G+C  G L +A  L  E+ ++  +PN  T+T LI   C+ GM+ +A
Sbjct: 761 GFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 819

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
           ++L+ +M++    P+   + +L+ G    G + + + LF +M   G  P           
Sbjct: 820 KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP----------- 868

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQL------AESGNLPDIITYNSLINGFCKVG 510
              DK +   M++ YC  G + +A K+  ++       +SG    + T + +  GF   G
Sbjct: 869 ---DKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           N++ A ++ + +   G   ++ + G L++G Q     ED+  +  QM
Sbjct: 926 NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 239/497 (48%), Gaps = 33/497 (6%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP+ V ++ L++ + K+  + EA+ +    +   F P L S + L+  L +  + +  + 
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-----------------R 337
            +  M   K+ PDV  Y  MI    + G VKDA ++L +M E                 +
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+VPD Y Y+ LI GFC      +A+ + +E+      P   T+  LI G  R G ++ A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGN 456
            ++ ++M   G   ++ ++N L++G+CKAG++EKA  ++   ME G  P           
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEP----------- 379

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D  +   ++E +C    + +A+++L ++ +    P ++TY+ +ING C+ GN+ G  
Sbjct: 380 ---DSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            + +E+ + GL+P++V Y TL+    +  R E++  I  +M + G  P    Y SL+   
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 577 CRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           C+ ++   A +  ++ L R +          I+ + + GE+E A +   EM        +
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  + G C++G V EA ++F  ++  + +    +   LIHGL + G +  A  +F  
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 696 TLKNGFILRPRVCNYLL 712
             + G +      N L+
Sbjct: 617 LQEKGLLPNAFTYNSLI 633



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 185/407 (45%), Gaps = 9/407 (2%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  N    F  F +   R+ L+   + S +I  L +       +    EL+   +   + 
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF 627

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LISG  K G+ +KA +   +M      PD+  YN +++   +      A  ++ ++
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN VT++ +++G  KS     A ++L+EM  RG+ P+ F Y ++++  C+  + 
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  LF +M + G +   V++N L+ G+CK  ++ EA  LL    +  F+P   +Y+ L
Sbjct: 748 EKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSL 806

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +A    EA   + +M E  + P    Y  ++ G    G + +   L  +M  +GI
Sbjct: 807 IDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGI 866

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF-------TILICGMCRNG 392
            PD   Y  +I  +C  G + +A  L+ EI  +  +P    F       +++  G    G
Sbjct: 867 EPDKMTYYVMIDAYCREGNVMEACKLKDEILVK-GMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            +D+A ++   M K G   +      L+DG       E ++ L  +M
Sbjct: 926 NMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/520 (31%), Positives = 277/520 (53%), Gaps = 27/520 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++S L K    D     L E+R          +  LI G  K  + ++A E F  MK 
Sbjct: 83  TALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS 142

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-------CLPNIVTFSLLINGLS 179
            +C P +  YN +L+  FR      A+A++ EM+          C PN++T+S+LI+GL 
Sbjct: 143 VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLC 202

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K+ +   A+++L+ M  RG  P+  TYTI++ GLC+ ++   A+ +  +M D+GC P+ V
Sbjct: 203 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 262

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN+LL+G C+ RRV +ALAL+R     G  P + +Y  LIDGL +  R  +A A    M
Sbjct: 263 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 322

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            ++   PD+++Y ++I GL +A +V +++ LL      GI PD   Y+++I G C    L
Sbjct: 323 IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 382

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D+A  L + +  R   P+   ++ LI G+C+ G VD+A  L+  M   GC   V  ++ L
Sbjct: 383 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTL 442

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           IDGLCKAG +++A+LL  +M  +G  P+                +  ++++  C    + 
Sbjct: 443 IDGLCKAGRVDEAHLLLARMVRMGTPPSTM--------------TYNSLIKGLCDLNHLD 488

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK-----GLRPDSVT 533
           +A +++ ++  S   P  +TYN LI+G C++  ++ A+ L ++ + +     G   D++ 
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIA 548

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           Y +LI+GL +  R  +A   F +M  NG  P    Y  L+
Sbjct: 549 YSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 292/553 (52%), Gaps = 33/553 (5%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRS----GNVSVVSD--VFFVLISGYYKVG 112
           R ++   N  + S+L+  +G     +++D LR         +V+D  ++  L+SG +K  
Sbjct: 36  RSKNLVPNVFLCSILI--DGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEK 93

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             ++AL    +M++  C+P+V  YN++++   +      A  ++  M  + C P++VT++
Sbjct: 94  RLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYN 153

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQR-------GILPNKFTYTIVISGLCQINRADEAYRL 225
            L++GL ++GK E A+ +  EM  R          PN  TY+++I GLC+ NR  +A  L
Sbjct: 154 TLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 213

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              MK  GCSPD + Y  L++G CK  +V  A  +LR     G VP L +Y+ L+ GL R
Sbjct: 214 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 273

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R  +A A  R M      P+VV YG +I GL + G+VKDA  +L+DM ++G  PD   
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN LI G C    +D++ +L          P+  T++ +I G+CR+  +D+A +L   ++
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 393

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             GC P V +++ LIDGLCKAG++++A  L+  M              G     D  +  
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM-------------AGDGCDADVVTYS 440

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T+++  C AG + +A+ +L ++   G  P  +TYNSLI G C + +++ A++L +E++  
Sbjct: 441 TLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERS 500

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQ-----MPQNGCTPSPAVYKSLMTWSCRRR 580
              P +VTY  LI+G+ R++R + A  +  Q     +   G       Y SL+   C+  
Sbjct: 501 NCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAG 560

Query: 581 KFSLAFSLWLQYL 593
           + + A   + + +
Sbjct: 561 RVAEALDYFQEMI 573



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 183/624 (29%), Positives = 302/624 (48%), Gaps = 29/624 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQPDVY Y A+L    R      A   + EM   N +PN+   S+LI+GL K+ ++  A+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +    M   GI+ +   YT ++SGL +  R D+A  +  +M+D GC P+ V YN+L++G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF-------E 301
           CK    D A  L    +     P + +Y+ L+DGLFR  + + A A +++M        +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           ++  P+V+ Y V+I GL +A +V  A++LL  M+ RG  PD   Y  L+ G C    +  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +  E+     +PN  T+  L+ G+CR   V DA  L   M   GC P+V  +  LID
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLCK G ++ A  +   M + G  P L +                 ++   C A  + ++
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMI--------------YNMLINGLCKADQVDES 350

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +L +    G  PD++TY+S+I G C+   ++ A +L   ++ +G  PD + Y TLI+G
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           L +  + ++AF ++  M  +GC      Y +L+   C+  +   A  L  + +R  +   
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 470

Query: 601 DESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF- 658
             +  S I+       ++ AI+ + EM+          Y I + G+C+  +V  A+ +  
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLE 530

Query: 659 SVLVECKA----IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
                C A     +   +   LI GLCK G +  A+D F   + NG I      + LL  
Sbjct: 531 QAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEG 590

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGY 738
           L  SKD  ++  + +L +M  +GY
Sbjct: 591 LKKSKDLHELR-HLVLDQMVQLGY 613


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 175/597 (29%), Positives = 301/597 (50%), Gaps = 58/597 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++VT+S +I+GL K+GK   A++M++EMT++G+ P+  TYTI++  LC+  + DEA  L
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM + GCS + VAYNAL+NG CK   ++ A  LL      G+ P   +Y+ ++ GL R
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS--DMRERGIVPDT 343
             +  EA  ++  M      PDVV Y  ++  L + GKV +A  L    DM +R + PD 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN LI GFC +   D+A  L  ++  +  +P+T T+  ++ G+ R   +D+A+++F K
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKA 462
           M  +GC P+   ++ ++ G C+ G + +   L+ +M   + +P + L             
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL------------- 294

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               +++  C A  +  A+K+L ++++ G +PD++TYN L++G CK   ++ A +LF  +
Sbjct: 295 -CNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              G  PD V+Y  ++NGL + ++  DA  +F +M +    P    +  LM   C+  K 
Sbjct: 354 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 413

Query: 583 SLA-------------------FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
             A                    +L     RD   R DE+++  +  ++KG V + +   
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRD--KRTDEAVRLFQYMVEKGTVADVL--- 468

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLC 681
                        P+ I L GLC++G++ +AL  F  +V+     +P   +   L++ L 
Sbjct: 469 -------------PHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALI 515

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           + G +D A+D F     +G        N L+  L   K  + + A  L   MK  G+
Sbjct: 516 EAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL--RKQGRHIQADRLTQAMKEKGF 570



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 251/548 (45%), Gaps = 87/548 (15%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +ISG  K G   +ALE   +M E    PDV  Y  +++   R      A  ++++M
Sbjct: 12  TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++  C  N V ++ LINGL K    E A K+L+EM  +G  P+  TY  ++SGLC++ + 
Sbjct: 72  IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALL---------------------------------- 245
            EA + F  M   G SPD VAYN LL                                  
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191

Query: 246 ---NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF-- 300
              +GFC++ + DEA+ L +     G++P   +Y+ ++ GL R    DEA   ++KM   
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 301 ---------------------------------EEKIEPDVVLYGVMIRGLSEAGKVKDA 327
                                            E++  PDV+L   +I  L +A KV DA
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            K+L +M + G VPD   YN L+ G C   L+D+A  L   +      P+  ++++++ G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+   V DA+ LF++M +    P V  FN L+DGLCKAG+L++A  L            
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL------------ 419

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            L +    N + D  +  T++   C      +A ++   + E G + D++ +N ++ G C
Sbjct: 420 -LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLC 478

Query: 508 KVGNINGALKLFKELQLKG--LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           + G +  AL  FK +        PD VTY TL+N L    R + A   F QM  +GC P 
Sbjct: 479 REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538

Query: 566 PAVYKSLM 573
              Y +LM
Sbjct: 539 YVAYNTLM 546



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 238/501 (47%), Gaps = 48/501 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K    +  ++ L+E+ S      +  +  ++SG  ++G   +A + F  M  
Sbjct: 84  NALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 143

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVY--YEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               PDV  YN +L+  +++     A  ++   +M      P+++T++ LI+G  +  KT
Sbjct: 144 RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKT 203

Query: 185 EVAIK-----------------------------------MLDEMTQRGILPNKFTYTIV 209
           + A+K                                   M  +M   G  PN  TY+IV
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIV 263

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +SG C++        L+ +M +   SPD +  NA+++  CK ++VD+A  +L    K G 
Sbjct: 264 LSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGA 323

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           VP + +Y+ L+DGL +    D+A+  +  M +    PD+V Y V++ GL +  KV DA  
Sbjct: 324 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 383

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L   M ER +VPD   +N L+ G C  G LD+A+ L   + + + LP+  T T L+ G+C
Sbjct: 384 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R+   D+A +LF  M + G    V   N ++ GLC+ G+L +A L F  M          
Sbjct: 444 RDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM---------- 493

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            +   G    D  +  T+V     AG + +A     Q+  SG  PD + YN+L+NG  K 
Sbjct: 494 -VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552

Query: 510 GNINGALKLFKELQLKGLRPD 530
           G    A +L + ++ KG   D
Sbjct: 553 GRHIQADRLTQAMKEKGFLSD 573



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 225/488 (46%), Gaps = 82/488 (16%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF P + +YS +I GL +  +  EA     +M E+ + PDV  Y +++  L  AGKV +A
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +L   M ERG   +T  YNALI G C    +++A  L  E+  +   P+  T+  ++ G
Sbjct: 65  DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +CR G V +A++ F+ M   G  P V  +N L+D L K G++ +A  LF  M+       
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD------- 177

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                                  +A+    PD+ITYN+LI+GFC
Sbjct: 178 ---------------------------------------MADRKVAPDLITYNTLIDGFC 198

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +V   + A+KLFK++  KG  PD+VTY +++ GL R    ++A  +F +M  +GC P+ A
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGA 258

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQ-----YLRDI------------SGRDDESMKSIEEF 610
            Y  +++  CR    +    L+ +     +  D+            + + D++ K +EE 
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318

Query: 611 LQKGEVENAI------QGLLEMDF---------KLNDFQLAP----YTIWLIGLCQDGQV 651
            + G V + +       GL + +           + D   AP    Y++ L GLC+  +V
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            +A  +F  ++E K +    +   L+ GLCK G LD A D+     ++  +     C  L
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438

Query: 712 LRSLLFSK 719
           +  L   K
Sbjct: 439 MHGLCRDK 446


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 189/637 (29%), Positives = 311/637 (48%), Gaps = 25/637 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLINGLS 179
           +M E  C PDV  YN +L     ++    AL + + M      +C PN+V+++ +ING  
Sbjct: 155 RMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFF 214

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
             G+ + A  +  EM  RGI PN  TYT VI GLC+    D A  +F +M D G  PD  
Sbjct: 215 TEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDND 274

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+  + +  E + +L      G  P   +Y  L++ L    R  EA  ++  M
Sbjct: 275 TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSM 334

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + I+P+V +YG++I G +  G + +   LL+ M E G+ PD + +N +   +    ++
Sbjct: 335 IRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMI 394

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D+A  +  ++ ++   P+   F  LI  +C+ G VDDA   FN+M   G  P++ +FN+L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           + GLC   + EKA   +++M           L+QG     D     T++   CT G + K
Sbjct: 455 VYGLCTVDKWEKAKEFYFEM-----------LNQGIRP--DVVFFNTILCNLCTKGQVMK 501

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A +++  +   G  PD+I+Y +LI G C VG I+ A K    +   GL+PD  TY TL++
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLH 561

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  R  R +DA+ +F +M +NG TP    Y +++      R+FS A  L+L  +      
Sbjct: 562 GYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQW 621

Query: 600 DDESMKSIEEFLQKG----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
           +      I   L K     E     Q L   DF+L   ++  + I +  L + G+ ++A+
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQL---EITTFNIMIGALFKSGRNEDAM 678

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           ++F+ +     +    +   +   L + GYL+   D+F    K+G     R+ N L+R L
Sbjct: 679 HLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 716 LFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           L   D  +  AY  L ++    + L+A       SLL
Sbjct: 739 LHRGDITRAGAY--LSKLDEKNFSLEASTTAMLISLL 773



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 231/466 (49%), Gaps = 17/466 (3%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           RS   +VVS  +  +I+G++  G  +KA   F +M +   QP+V  Y  V++   + Q+ 
Sbjct: 197 RSCPPNVVS--YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVV 254

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  V+ +M+     P+  T++ LI+G    GK +  ++ML+EM+  G+ P+ +TY  +
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           ++ LC   R  EA   F  M   G  P+   Y  L++G+     + E   LL    ++G 
Sbjct: 315 LNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P    ++ +     +    DEA   + KM ++ + PDVV +G +I  L + G+V DA+ 
Sbjct: 375 SPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVL 434

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
             + M   G+ P+ + +N+L+ G C +   ++A+    E+  +   P+   F  ++C +C
Sbjct: 435 KFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLC 494

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLF 448
             G V  AQ+L + ME+ G  P V  +  LI G C  G + E A  L   + +G  P   
Sbjct: 495 TKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKP--- 551

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                      D+ +  T++  YC AG I  AY +  ++  +G  P ++TY+++++G   
Sbjct: 552 -----------DEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
               + A +L+  +   G + +   Y  ++NGL + +  ++AF++F
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLF 646



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 242/547 (44%), Gaps = 17/547 (3%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +           +  F+    R    +  + + VI  L K    D       +
Sbjct: 204 VSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V   +D +  LI GY  +G  ++ +    +M     +PD Y Y ++LN       
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A   +  M++    PN+  + +LI+G +  G       +L+ M + G+ P+   + I
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           + +   +    DEA  +F KMK  G SPD V + AL++  CKL RVD+A+        +G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  ++ L+ GL    ++++A  +Y +M  + I PDVV +  ++  L   G+V  A 
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ-ARSLQVEIWKRDSLPNTHTFTILICG 387
           +L+  M   G  PD   Y  LI G C +G +D+ A+SL V +      P+  T+  L+ G
Sbjct: 504 RLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDV-MLSVGLKPDEWTYNTLLHG 562

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
            CR G +DDA  +F +M + G  P V  ++ ++ GL       +A  L+  M   GK   
Sbjct: 563 YCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN 622

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +++              L  + +  C    + +A+K+   L       +I T+N +I   
Sbjct: 623 IWIY----------NIILNGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K G    A+ LF  +   GL PD  TY  +   L      E+   +F  M ++G TP+ 
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 567 AVYKSLM 573
            +  +L+
Sbjct: 729 RMLNALV 735



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 199/452 (44%), Gaps = 15/452 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +LI GY   G   +  +    M E    PD +I+N +     +K +   A+ ++ +M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++V F  LI+ L K G+ + A+   ++M   G+ PN F +  ++ GLC +++ 
Sbjct: 405 KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKW 464

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A   + +M + G  PD V +N +L   C   +V +A  L+   E+ G  P + SY+ L
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL 524

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G     R DEA      M    ++PD   Y  ++ G   AG++ DA  +  +M   GI
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y+ ++ G        +A+ L + +       N   + I++ G+ +N  VD+A K
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           LF  +        +  FN +I  L K+G  E A  LF  +   G  P +F          
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF---------- 694

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   + E     G + +   +   + +SG  P+    N+L+      G+I  A   
Sbjct: 695 ----TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
             +L  K    ++ T   LI+ L R +    A
Sbjct: 751 LSKLDEKNFSLEASTTAMLISLLSRDEYHHHA 782



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 35/339 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+ G   V   EKA E + +M     +PDV  +N +L     K   + A  +   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++   P++++++ LI G    G+ + A K LD M   G+ P+++TY  ++ G C+  R 
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 220 DEAYRLFLKMKDSGCSPDFVAY-----------------------------------NAL 244
           D+AY +F +M  +G +P  V Y                                   N +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           LNG  K   VDEA  L +S     F   + +++ +I  LF++ R ++A   +  +    +
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDV  Y ++   L E G +++   L S M + G  P++   NAL++     G + +A +
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
              ++ +++      T  +LI  + R+     A  L  K
Sbjct: 750 YLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 4/227 (1%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D Y    + LR+G    V   +  ++ G +      +A E +  M     Q +++IYN +
Sbjct: 571 DAYGVFREMLRNGITPGVV-TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           LN   +      A  ++  +   +    I TF+++I  L KSG+ E A+ +   ++  G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +P+ FTY ++   L +    +E   LF  M+ SG +P+    NAL+        +  A A
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW---YRKMFEEK 303
            L   ++  F     + + LI  L R + +  A +    YR + E K
Sbjct: 750 YLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAK 796


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 291/615 (47%), Gaps = 59/615 (9%)

Query: 21  ALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS--FASNSAVISMLLKPNG 78
           AL+     LS   V  V+ +  +P     FF WA  R   +   F  N  ++++L+K + 
Sbjct: 83  ALDEYRGQLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCN-CLLNVLVKAHQ 141

Query: 79  FDLYWQTLDELRS---GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
              Y Q  D  RS   G     +  +  LISG+ + G    A E F +M     +    +
Sbjct: 142 ---YSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGV 198

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           + ++L           A+  + EM K  C P+ VT++ +INGLSKS + + AI++L+EM 
Sbjct: 199 HKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 257

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G  PN F+Y  V+ G C+ NR + A  L  +M   GC PD V+Y  ++NG CKL +VD
Sbjct: 258 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVD 317

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE---------- 305
           EA  ++    + G  P + +Y  L+DG  R    D A    RKM E              
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377

Query: 306 -------------------------PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                                    PD + Y  +I G  +AGK+++A  LL  M  RG  
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD  C + LI   C    +D A+ L       D  P+   ++ILI  +C+   + +A+  
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESW 497

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            + M K  C+P V  +N+++DGLCK+  +  A LLF +M             +    + D
Sbjct: 498 LDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM-------------RAAGVMPD 544

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   ++  +C    +  A+K+L ++ E+  +PD++TY++LING CK G ++ A  +F+
Sbjct: 545 VVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQ 604

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+   G  P+ VTY TLI+GL ++++ E A  +   M +  CTP    Y  L+   C   
Sbjct: 605 EMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNAS 664

Query: 581 KFSLAFSLWLQYLRD 595
           +   A+ + L+ ++D
Sbjct: 665 RLEEAWRV-LREMKD 678



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 186/711 (26%), Positives = 332/711 (46%), Gaps = 63/711 (8%)

Query: 19   EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR--SFASN---SAVISML 73
            E ALE     L+ T V  V+   +N      FF WA  ++     ++  N    A++ + 
Sbjct: 799  ETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLK 858

Query: 74   LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
               +   +Y   L    S N+      F +LI G  + GD   A E   +M       +V
Sbjct: 859  RPKDALQVYRNKL--CCSPNMFT----FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNV 912

Query: 134  YIYNAVLNIAFRKQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
             ++N V+      +    AL ++ EM +  +C P++ T+S +++ L KSGK + A ++++
Sbjct: 913  ILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 972

Query: 193  EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
            +M  +G  PN  TY+ ++ GLC+  + DEA  L  +M  SGCSP+ V YN +++G CKL 
Sbjct: 973  DMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 1032

Query: 253  RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            R+DEA  LL      G  P + +Y+ L+D   +  + ++A      M E+   P++  Y 
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092

Query: 313  VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
             ++    +  +V+ A +LLS M ++G VP+   YN +I G C    + +   L  ++   
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152

Query: 373  DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
            + +P+  TF  +I  MC+   VD A +LFN ++++GC P++  +N+L+ GLCK+   ++A
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212

Query: 433  NLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
              L  +M  + G +P              D  +  T+++  C +  + +AYK+ +Q+   
Sbjct: 1213 EYLLREMTRKQGCSP--------------DIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258

Query: 491  GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            G  PD +TY+ +I+  CK   ++ A  + + +   G  P ++TYGTLI+G  +    + A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318

Query: 551  FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
              I   +   G  P    +   + W  +R                  GR  ++ + +E  
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWLSKR------------------GRLRQAGELLETM 1360

Query: 611  LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            L+ G V + +                 Y   L G C     ++A+++F V+ +C      
Sbjct: 1361 LRAGLVPDTVT----------------YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDN 1404

Query: 671  PSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
             +   L+ H + K+ Y DL  +V    +  GF L   + + L  S+    D
Sbjct: 1405 ATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEAD 1455



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/536 (28%), Positives = 259/536 (48%), Gaps = 13/536 (2%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + +I    K    D  +  L+E+  G        + VL+  + K G  E A+     M E
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 1081

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P+++ YN++L++  +K     A  +   M++  C+PN+V+++ +I GL K+ K   
Sbjct: 1082 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             + +L++M     +P+  T+  +I  +C+  R D AY LF  +++SGC+P+ V YN+L++
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 1201

Query: 247  GFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
            G CK RR D+A  LLR    K G  P + +Y+ +IDGL ++KR D AY  + +M  + + 
Sbjct: 1202 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 1261

Query: 306  PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            PD V Y ++I  L +   + +A  +L  M + G  P    Y  LI GFC  G LD+A  +
Sbjct: 1262 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 1321

Query: 366  QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
               +  + S P+  TF+I I  + + G +  A +L   M +AG  P    +N L+ G C 
Sbjct: 1322 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 1381

Query: 426  AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            A   E A  LF  M + G  P      +  G+ V DK S + ++ +  +  ++   +K+ 
Sbjct: 1382 ASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLV-DKKSYKDLLAEV-SKSMVDTGFKLN 1439

Query: 485  MQLAESGNL-----PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
             +L+           D+    ++++ F K G+   A K+F+ +  + +   S   G  + 
Sbjct: 1440 HELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVF 1499

Query: 540  GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
              Q    EE AF ++  M   G  P    + SL+T  C       A   ++   RD
Sbjct: 1500 HKQ----EEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRD 1551



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 192/791 (24%), Positives = 323/791 (40%), Gaps = 125/791 (15%)

Query: 65   SNSAVISMLLKPNGFDLYWQTLDEL--RSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
            S + VI+ L K +  D   + +D++  R    +V++  +  L+ G+ +VGD + A+E   
Sbjct: 302  SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT--YGTLVDGFCRVGDLDGAVELVR 359

Query: 123  KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            KM E   +P+   YN ++++  R+     A  V   M++  C P+ + +S +I+G  K+G
Sbjct: 360  KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 183  KTEVAIKMLDEMTQRGI-----------------------------------LPNKFTYT 207
            K   A  +L++M +RG                                     P+   Y+
Sbjct: 420  KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479

Query: 208  IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            I+I  LC+  R  EA      M  + C PD V YN++++G CK RR+++A  L       
Sbjct: 480  ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            G +P + +YS +I    +    D A+    +M E K  PDVV Y  +I GL +AG V  A
Sbjct: 540  GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
              +  +M   G  P+   YN LI G C +  ++QA  +   + K+   P++ T+T LI G
Sbjct: 600  FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK---- 443
            +C    +++A ++  +M+  GC P    +  L+  L K   LE    L  +ME  +    
Sbjct: 660  LCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQW 719

Query: 444  --NPTLFLRLSQGGN-----------------RVHDKASLQTMV----EQY------CTA 474
              N     R    G+                 RV D    Q        QY         
Sbjct: 720  NANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQG 779

Query: 475  GLIHKAYKIL-----MQLAE------SGNLPDIITYNSLINGFCKVGNINGALKLFK-EL 522
            G  HK  +IL      + AE      +G L   +    ++ G   V N + AL  F    
Sbjct: 780  GFHHKIVRILNSRFAWEYAETALERFTGKLTTTVV-GKVLQG---VRNGDAALGFFDWAT 835

Query: 523  QLKGLRPDSVTYGTLINGLQRVDREEDAFRIF---------------------------- 554
              +G   D+ T   L+  L R+ R +DA +++                            
Sbjct: 836  SQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGT 895

Query: 555  -----GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
                  +MP++G   +  ++  ++   C  RK   A  L+ +     S   D    S  +
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955

Query: 608  EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            +  ++ G+V++A + + +M  K     +  Y+  L GLC+ G++ EA  +   +      
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 668  VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
                +   +I G CK G +D A  +    +  G   +P V  Y +    F K  K   A 
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG--CQPNVVTYTVLLDAFCKCGKAEDAI 1073

Query: 728  HLLCRMKSVGY 738
             L+  M   GY
Sbjct: 1074 GLVEVMVEKGY 1084



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 263/571 (46%), Gaps = 24/571 (4%)

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           T+ G     F    +++ L + ++  +A+ LF    +     D V Y+ L++GF +  ++
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
             A  L     + G     G +  ++ GL  A +  +A   +R+M  +   PD V Y  M
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTM 236

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GLS++ ++ DA++LL +M + G  P+ + YN ++ GFC    ++ A  L  ++  R  
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGC 296

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P+  ++T +I G+C+   VD+A ++ +KM + GC P+V  +  L+DG C+ G+L+ A  
Sbjct: 297 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 356

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           L  KM E G  P              +  +   ++  +C    + +A+++L  + ++G  
Sbjct: 357 LVRKMTERGYRP--------------NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD I Y+++I+GFCK G +  A  L +++  +G RPD     TLI+ L +    + A  +
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQ 612
                   C P    Y  L+   C+ ++   A S WL  + ++    D  +  S+ + L 
Sbjct: 463 LRMSIGMDCAPDVVAYSILIHALCKAKRLPEAES-WLDVMVKNRCYPDVVTYNSVVDGLC 521

Query: 613 KGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           K   + +A      M        +  Y+I +   C+D  +  A  +   + E K +    
Sbjct: 522 KSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVV 581

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +   LI+GLCK G +D A DVF   L  G        N L+  L   K NK   A  +L 
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGL--CKINKVEQAAEMLE 639

Query: 732 RMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
            M+      D+  Y     L+ G  N   +E
Sbjct: 640 IMRKQSCTPDSITY---TCLINGLCNASRLE 667



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 254/531 (47%), Gaps = 29/531 (5%)

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE--- 265
           V+  + Q    ++A R+ L       SP+ V           L+R+ +  A L  FE   
Sbjct: 66  VLERIVQGASDEQALRVALDEYRGQLSPEIVGK--------VLQRLIDPGAALVFFEWAE 117

Query: 266 -KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            +DG+   +   +CL++ L +A +Y +A+  +R   E +   D V Y  +I G   AGK+
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A +L  +M  +G+      + ++++G CD G    A  L      +   P++ T+  +
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDA-VLHFREMSKTCPPDSVTYNTM 236

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I G+ ++  +DDA +L  +M   G  P+V  +N ++ G CKA  +E A  L  +M     
Sbjct: 237 INGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGC 296

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  S  T++   C    + +A +++ ++ + G  P++ITY +L++
Sbjct: 297 PP-------------DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 343

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GFC+VG+++GA++L +++  +G RP+++TY  +++   R +  E A ++   M Q GC P
Sbjct: 344 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPP 403

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y ++++  C+  K   A  L  Q +R     D   + ++ + L K    ++ Q LL
Sbjct: 404 DAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463

Query: 625 EMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            M   ++    +  Y+I +  LC+  ++ EA +   V+V+ +      +   ++ GLCK 
Sbjct: 464 RMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKS 523

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
             ++ A  +F      G +  P V  Y +    F KDN    A+ +L RMK
Sbjct: 524 RRINDAFLLFDRMRAAGVM--PDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 180/450 (40%), Gaps = 53/450 (11%)

Query: 33   TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RS 91
            T+   + KT    + +  F    +     +  + ++++  L K   FD     L E+ R 
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
               S     +  +I G  K    ++A + F +M      PD   Y+ V++   + +    
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            A  V   M+K    P  +T+  LI+G  K+G  + A+++L  +  +G  P+  T++I I 
Sbjct: 1283 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 1342

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             L +  R  +A  L   M  +G  PD V YN LL GFC     ++A+ L     + G  P
Sbjct: 1343 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEP 1402

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-----------------KIEPDVVLYGVM 314
               +Y+ L+  L   K Y +  A   K   +                 ++E DV L   +
Sbjct: 1403 DNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAI 1462

Query: 315  IRGLSEAGKVKDAMKLLSDMRERGIV-------------------------------PDT 343
            +    + G  +DA K+   M +R +V                               PD 
Sbjct: 1463 VDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDA 1522

Query: 344  YCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFN 402
              + +L+   C  GLLD A    V I +   L P    F+ +I  + R G+V++A+ L  
Sbjct: 1523 VTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLML 1582

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             M    C PS   +N L+      G+ E+A
Sbjct: 1583 GMP---CKPSAATWNCLLSAYKICGDFERA 1609



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 54/296 (18%)

Query: 18   IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFI-WAAKRKRLRSFASNSAVISMLLKP 76
            ++ ALE L   LSK +   V        V F  FI W +KR RLR               
Sbjct: 1315 LDKALEILQLLLSKGSYPDV--------VTFSIFIDWLSKRGRLRQAGE----------- 1355

Query: 77   NGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
                   +T+  LR+G   +V D   +  L+ G+      E A++ F  M++  C+PD  
Sbjct: 1356 -----LLETM--LRAG---LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNA 1405

Query: 135  IYNAVLNIAFRKQLFLLALA-VYYEMV----KLNC-LPNIVTFSL-----------LING 177
             Y  ++     K+ +   LA V   MV    KLN  L + +  S+           +++ 
Sbjct: 1406 TYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDM 1465

Query: 178  LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
              K G  + A K+ + M QR ++     ++ ++       + ++A+ L+  M   G  PD
Sbjct: 1466 FGKCGSPQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPD 1521

Query: 238  FVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEA 292
             V + +LL   C    +D A+    S  +D G  P +  +SC+ID L R    +EA
Sbjct: 1522 AVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEA 1577


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 170/477 (35%), Positives = 254/477 (53%), Gaps = 26/477 (5%)

Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L +  KMK+FD                D+Y YN ++N   R+    LALAV  +M+KL
Sbjct: 85  KLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+IVT S L+NG   S +   A+ ++D+M + G  P+  T+  +I GL   N+A EA
Sbjct: 145 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEA 204

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   GC PD V Y A++NG CK   +D AL+LL+  EK      +  Y+ +IDG
Sbjct: 205 VALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 264

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + K  D+A+A + KM  + I PDV  Y  +I  L   G+  DA +LLS+M ER I P+
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN 324

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +F 
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M    CFP+V  +N LI G CKA  +E+       ME      LF  +SQ G  V +  
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGNTV 431

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+++    AG    A KI  ++   G  PDIITY+ L++G CK G +  AL +F+ L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           Q   + PD  TY  +I G+ +  + ED + +F  +   G  P+  +Y ++++  CR+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 162/529 (30%), Positives = 265/529 (50%), Gaps = 13/529 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    + + L S    + ++S + K   FDL     + +++  +S     + +LI+ + 
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +PD+   +++LN     +    A+A+  +MV++   P+ V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D+M QRG  P+  TY  V++GLC+    D A  L  KM
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +      D V YN +++G CK + +D+A AL    E  G  P + +Y+ LI  L    R+
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++L
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GFC    LD+A+ +   +  +D  PN  T+  LI G C+   V++  +LF +M + G 
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +   +N LI GL +AG+ + A  +F KM     P              D  +   +++
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------------DIITYSILLD 473

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + KA  +   L +S   PDI TYN +I G CK G +     LF  L LKG++P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + + Y T+I+G  R   +E+A  +F +M ++G  P    Y +L+    R
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 582



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 206/397 (51%), Gaps = 8/397 (2%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           AV++ L K    DL    L ++  G +     ++  +I G  K    + A   F KM+  
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +PDV+ YN++++       +  A  +   M++    PN+VTFS LI+   K GK   A
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM +R I P+ FTY+ +I+G C  +R DEA  +F  M    C P+ V YN L+ G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + L R   + G V    +Y+ LI GLF+A   D A   ++KM  + + PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL + GK++ A+ +   +++  + PD Y YN +I+G C  G ++    L  
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN   +T +I G CR G+ ++A  LF +M++ G  P  G +N LI    + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 584

Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
           +   +  L  +M     +G   T+ + +    N +HD
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVI----NMLHD 617



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 160/585 (27%), Positives = 272/585 (46%), Gaps = 64/585 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + AI +  EM Q   LP+   +  ++S + ++ + D    L  +M++   S D  +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+N FC+  ++  ALA+L    K G+ P + + S L++G   +KR  +A A   +M E 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +PD V +  +I GL    K  +A+ L+  M +RG  PD   Y A++ G C  G +D A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  ++ K     +   +  +I G+C+   +DDA  LFNKME  G  P V  +N+LI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---------GNRVHDKA-------- 462
           LC  G    A+ L   M   +I  N   F  L              +++D+         
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++  +C    + +A  +   +      P+++TYN+LI GFCK   +   ++LF+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  +GL  ++VTY TLI GL +    + A +IF +M  +G  P    Y  L+   C+  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
           K   A  ++                   E+LQK ++E  I                 Y I
Sbjct: 480 KLEKALVVF-------------------EYLQKSKMEPDIY---------------TYNI 505

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
            + G+C+ G+V++  ++F  L   K +   P+ +    +I G C++G  + A  +F    
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSL-SLKGV--KPNVIIYTTMISGFCRKGLKEEADALFREMK 562

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           ++G +      N L+R+ L  +D  K  +  L+  M+S G+  DA
Sbjct: 563 EDGTLPDSGCYNTLIRARL--RDGDKAASAELIKEMRSCGFVGDA 605



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 228/444 (51%), Gaps = 15/444 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI G +      +A+    +M +  CQPD+  Y AV+N   ++    LAL++  +M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM 246

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K     ++V ++ +I+GL K    + A  + ++M  +GI P+ FTY  +IS LC   R 
Sbjct: 247 EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A RL   M +   +P+ V ++AL++ F K  ++ EA  L     K    P + +YS L
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G     R DEA   +  M  +   P+VV Y  +I+G  +A +V++ M+L  +M +RG+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           V +T  YN LI+G    G  D A+ +  ++      P+  T++IL+ G+C+ G ++ A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           +F  ++K+   P +  +N +I+G+CKAG++E    LF  + + G  P + +         
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII--------- 537

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                  TM+  +C  GL  +A  +  ++ E G LPD   YN+LI    + G+   + +L
Sbjct: 538 -----YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 592

Query: 519 FKELQLKGLRPDSVTYGTLINGLQ 542
            KE++  G   D+ T   +IN L 
Sbjct: 593 IKEMRSCGFVGDASTISMVINMLH 616



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 28/332 (8%)

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           N  +DDA  LF +M ++   PS+  FN L+  + K   ++K +L+    E  +N    LR
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAK---MKKFDLVISLGERMQN----LR 110

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           +S      +D  S   ++  +C    +  A  +L ++ + G  PDI+T +SL+NG+C   
Sbjct: 111 IS------YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSK 164

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+ A+ L  ++   G +PD+VT+ TLI+GL   ++  +A  +  QM Q GC P    Y 
Sbjct: 165 RISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 224

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFK 629
           +++   C+R    LA SL  +  +     D     +I + L K   +++A     +M+ K
Sbjct: 225 AVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETK 284

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL--- 686
                +  Y   +  LC  G+  +A  + S ++E K      +   LI    K G L   
Sbjct: 285 GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 687 ----------DLAMDVFLY-TLKNGFILRPRV 707
                      +  D+F Y +L NGF +  R+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   ++ S  V     
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K G  EKAL  F  +++   +PD+Y YN                      
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN---------------------- 504

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ PN   YT +ISG C+    
Sbjct: 505 -------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  PD   YN L+    +LR  D+A +  L++     GFV    + S
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 609

Query: 278 CLIDGLFRAKRYDEAY 293
            +I+ +    R +++Y
Sbjct: 610 MVIN-MLHDGRLEKSY 624


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 179/611 (29%), Positives = 303/611 (49%), Gaps = 32/611 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +N ++ +  R +   L +++Y +M +  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              ++ +F++LI       K   A+    ++T+ G  P+  T++ ++ GLC  +R  EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M    C P+ V +  L+NG C+  RV EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I+P+VV+Y  +I GL + G+  DA  L ++M+E+GI PD
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN +I GFC  G   +A+ L  E+ +R   PN  T++ LI    +     +A++L++
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYD 343

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +N++IDG CK   L+ A  +FY M   G +P +F             
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF------------- 390

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GFC VG++N AL L ++
Sbjct: 391 -TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   G+ PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I    ++  ++ A Q    M  K
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +   + G C+ G+V + L +F  +     +    + + LIHG  K G ++ A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 630 LDIFQEMISSG 640



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/574 (28%), Positives = 278/574 (48%), Gaps = 63/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +   QPDV  ++ +L+    +     AL ++++M 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN+VTF+ L+NGL + G+   A+ +LD M + G+ PN+ TY  ++ G+C+I    
Sbjct: 174 ---CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++G  K  R  +A  L    ++ G  P L +Y+C+
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG   + R+ EA    ++M E KI P+VV Y  +I    +  K  +A +L  +M  RGI
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  YN++I GFC    LD A  +   +  +   P+  TF  LI G C    +DD  +
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G C  G+L  A  L  +M           +S G     
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM-----------ISSG--VCP 457

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLIN 517

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L+KE+  +G+ P+++TY ++INGL +  R ++A ++F  M     +P    
Sbjct: 518 EGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVT 577

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L++  C+                  +GR D+ ++   E  ++G V +AI        
Sbjct: 578 FNTLVSGYCK------------------AGRVDDGLELFCEMGRRGIVADAIT------- 612

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 613 ---------YITLIHGFRKVGNINGALDIFQEMI 637



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 257/512 (50%), Gaps = 27/512 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP+   Y  +++   +    + AL +  +M
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239

Query: 160 VKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +++ + PN+V +S +I+GL K G+   A  +  EM ++GI P+ FTY  +I G C   R
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA RL  +M +   +P+ V Y+AL+N + K R+  EA  L       G +P   +Y+ 
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNS 359

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   PDV  +  +I G   A ++ D  +LL +M E G
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V DT  YN LI GFC +G L+ A  L  ++      P+  T   L+ G+C NG + DA 
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEM-----PHR 534

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V +  +  +M+   C    + +A ++   +      PD++T+N+L++G+C
Sbjct: 535 GI--------VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  D++TY TLI+G ++V     A  IF +M  +G  P   
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTI 646

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
             +S++T  WS    K ++A    LQ   D+S
Sbjct: 647 TIRSMLTVLWSKEELKRAVAMLEDLQMSMDLS 678



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 178/363 (49%), Gaps = 13/363 (3%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R  N +VV+  +  LI+ Y K     +A E + +M      P+   YN++++   ++   
Sbjct: 313 RKINPNVVT--YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  ++Y M    C P++ TF+ LI+G   + + +   ++L EMT+ G++ +  TY  +
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK--- 266
           I G C +   + A  L  +M  SG  PD V  N LL+G C   ++ +AL + ++ +K   
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 267 --------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
                   +G  P + +Y+ LI GL    ++ EA   Y++M    I P+ + Y  MI GL
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +  ++ +A ++   M  +   PD   +N L+ G+C  G +D    L  E+ +R  + + 
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADA 610

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+  LI G  + G ++ A  +F +M  +G +P      +++  L    EL++A  +   
Sbjct: 611 ITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLED 670

Query: 439 MEI 441
           +++
Sbjct: 671 LQM 673



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L K +  D   Q  D + S + S     F  L+SGY K G  +  LE F +M  
Sbjct: 544 SSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGR 603

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLL-ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                D   Y  +++  FRK   +  AL ++ EM+     P+ +T   ++  L    + +
Sbjct: 604 RGIVADAITYITLIH-GFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELK 662

Query: 186 VAIKMLDEM 194
            A+ ML+++
Sbjct: 663 RAVAMLEDL 671


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/583 (28%), Positives = 294/583 (50%), Gaps = 24/583 (4%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS 67
           VL     + P +P  + LL    ++ V   +   +N      FF   A     +  AS  
Sbjct: 21  VLNSNPIINPRDPNKQQLL---QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTY 77

Query: 68  AV-ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            V I  L +    D+    L +++   ++   D+F  +I+GY +VG  E+AL+ F ++ E
Sbjct: 78  RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE 137

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F C+P V IYN +L+    +  F +   +Y  M K   +PN+ T+++L+  L K+ + + 
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+  EM+ +G  P+  TYT ++S LC+  + D+A  L  + K     P    YNAL++
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALID 252

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R++ A+ LL     +G  P + SYSC+I+ L  +   + A+A + +MF    + 
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           ++  +  +I+G    GK+ +A+ L   M + G  P+   YN LI G C  G L++A  + 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +   LPN  T++ILI G  ++G +  A + +N+M   GC P+V  +  ++D LCK 
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
              ++AN L  KM + G  P              +  +  T ++  C  G +  A K+L 
Sbjct: 433 SMFDQANSLVEKMTLEGCTP--------------NTMTFNTFIKGLCGNGRVEWAMKLLE 478

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G LP+I TYN L++   ++     A  LF+E++ + L+P+ VTY T++ G  R  
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
              +A ++FG+    G  P    Y +++   C++ K  +A  L
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 186/390 (47%), Gaps = 36/390 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  + K    ++  + L E+    V      +  +I+     G+ E A   F +M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C  +++ +  ++   F +     AL ++  M++  C PN+V ++ LI+GL  +G  E 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISG---------------------------------- 212
           A+++ D+M + G LPN  TY+I+I G                                  
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 213 -LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+ +  D+A  L  KM   GC+P+ + +N  + G C   RV+ A+ LL   +  G +P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ L+D LFR  +Y+EA+  ++++    ++P++V Y  ++ G S AG + +A++L 
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILICGMCR 390
                RG  PD+  YN +I  +C  G +  A  L   +   ++  P+  T+T LI G C 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
              +++A    +K    G  P+   +NAL+
Sbjct: 608 WMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 3/274 (1%)

Query: 84  QTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           Q  D++ RSG +  V+  + +LI G+ K GD   A E++ +M    C+P+V  Y  ++++
Sbjct: 370 QVCDQMQRSGCLPNVT-TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +F  A ++  +M    C PN +TF+  I GL  +G+ E A+K+L+ M   G LPN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  ++  L ++N+ +EA+ LF +++     P+ V YN +L GF +   + EAL L  
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEA 321
                G  P   +Y+ +I    +  +   A     ++   K   PD++ Y  +I G    
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +++AM  L     +GI P+   +NAL++ F D
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 158/382 (41%), Gaps = 23/382 (6%)

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y VMI  L    ++     +L  M+  GI      +  +I G+  +G  +QA  +   I 
Sbjct: 77  YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG 136

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +    P    +  L+  +           L+  M+K G  P+V  +N L+  LCK   ++
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A+ LF +M     P              D  +  TMV   C AG I  A ++  +    
Sbjct: 197 AAHKLFVEMSNKGCPP-------------DAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P +  YN+LI+G CK G I  A+KL  E+   G+ P+ V+Y  +IN L      E A
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEE 609
           F +F QM   GC  +   +  L+     R K   A  LW   ++D    +  +  + I  
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAI 667
               G +E A+Q   +M        +  Y+I + G  + G +  A   ++ ++   C+  
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 668 VTPPSCVKLIHGLCKRGYLDLA 689
           V   +C  ++  LCK    D A
Sbjct: 419 VVTYTC--MVDVLCKNSMFDQA 438



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 1/219 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++ +L K + FD     ++++     +  +  F   I G    G  E A++   +M+ 
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P++  YN +L+  FR   +  A  ++ E+   N  PN+VT++ ++ G S++G    
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALL 245
           A+++  +   RG  P+  TY  +I   C+  +   A +L  ++       PD + Y +L+
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            G C    ++EA+A L      G  P   +++ L+   F
Sbjct: 603 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 10/226 (4%)

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY  +I    +   ++    + +++++ G+      +  +ING +RV   E A ++F ++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-V 616
            + GC P+  +Y  L+       KF +   L+    +D    +  +   + + L K + V
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           + A +  +EM  K        YT  +  LC+ G++ +A  +       +   + P    L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----RFKPSVPVYNAL 250

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKD 720
           I G+CK G +++A+ +    + NG  + P V +Y  ++ SL  S +
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNG--VDPNVVSYSCIINSLCVSGN 294


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/583 (28%), Positives = 294/583 (50%), Gaps = 24/583 (4%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS 67
           VL     + P +P  + LL    ++ V   +   +N      FF   A     +  AS  
Sbjct: 21  VLNSNPIINPRDPNKQQLL---QESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTY 77

Query: 68  AV-ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            V I  L +    D+    L +++   ++   D+F  +I+GY +VG  E+AL+ F ++ E
Sbjct: 78  RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGE 137

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F C+P V IYN +L+    +  F +   +Y  M K   +PN+ T+++L+  L K+ + + 
Sbjct: 138 FGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDA 197

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+  EM+ +G  P+  TYT ++S LC+  + D+A  L  + K     P    YNAL++
Sbjct: 198 AHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALID 252

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R++ A+ LL     +G  P + SYSC+I+ L  +   + A+A + +MF    + 
Sbjct: 253 GMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDA 312

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           ++  +  +I+G    GK+ +A+ L   M + G  P+   YN LI G C  G L++A  + 
Sbjct: 313 NIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVC 372

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +   LPN  T++ILI G  ++G +  A + +N+M   GC P+V  +  ++D LCK 
Sbjct: 373 DQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKN 432

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
              ++AN L  KM + G  P              +  +  T ++  C  G +  A K+L 
Sbjct: 433 SMFDQANSLVEKMTLEGCTP--------------NTITFNTFIKGLCGNGRVEWAMKLLE 478

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G LP+I TYN L++   ++     A  LF+E++ + L+P+ VTY T++ G  R  
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAG 538

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
              +A ++FG+    G  P    Y +++   C++ K  +A  L
Sbjct: 539 MMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 186/390 (47%), Gaps = 36/390 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  + K    ++  + L E+    V      +  +I+     G+ E A   F +M  
Sbjct: 248 NALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFL 307

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C  +++ +  ++   F +     AL ++  M++  C PN+V ++ LI+GL  +G  E 
Sbjct: 308 RGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISG---------------------------------- 212
           A+++ D+M + G LPN  TY+I+I G                                  
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427

Query: 213 -LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+ +  D+A  L  KM   GC+P+ + +N  + G C   RV+ A+ LL   +  G +P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ L+D LFR  +Y+EA+  ++++    ++P++V Y  ++ G S AG + +A++L 
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILICGMCR 390
                RG  PD+  YN +I  +C  G +  A  L   +   ++  P+  T+T LI G C 
Sbjct: 548 GKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACN 607

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
              +++A    +K    G  P+   +NAL+
Sbjct: 608 WMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 3/274 (1%)

Query: 84  QTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           Q  D++ RSG +  V+  + +LI G+ K GD   A E++ +M    C+P+V  Y  ++++
Sbjct: 370 QVCDQMQRSGCLPNVT-TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +F  A ++  +M    C PN +TF+  I GL  +G+ E A+K+L+ M   G LPN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  ++  L ++N+ +EA+ LF +++     P+ V YN +L GF +   + EAL L  
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEA 321
                G  P   +Y+ +I    +  +   A     ++   K   PD++ Y  +I G    
Sbjct: 549 KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNW 608

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +++AM  L     +GI P+   +NAL++ F D
Sbjct: 609 MNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 158/382 (41%), Gaps = 23/382 (6%)

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y VMI  L    ++     +L  M+  GI      +  +I G+  +G  +QA  +   I 
Sbjct: 77  YRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIG 136

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +    P    +  L+  +           L+  M+K G  P+V  +N L+  LCK   ++
Sbjct: 137 EFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVD 196

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A+ LF +M     P              D  +  TMV   C AG I  A ++  +    
Sbjct: 197 AAHKLFVEMSNKGCPP-------------DAVTYTTMVSSLCKAGKIDDARELAGRFK-- 241

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P +  YN+LI+G CK G I  A+KL  E+   G+ P+ V+Y  +IN L      E A
Sbjct: 242 ---PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEE 609
           F +F QM   GC  +   +  L+     R K   A  LW   ++D    +  +  + I  
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAI 667
               G +E A+Q   +M        +  Y+I + G  + G +  A   ++ ++   C+  
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 668 VTPPSCVKLIHGLCKRGYLDLA 689
           V   +C  ++  LCK    D A
Sbjct: 419 VVTYTC--MVDVLCKNSMFDQA 438



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 1/219 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++ +L K + FD     ++++     +  +  F   I G    G  E A++   +M+ 
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P++  YN +L+  FR   +  A  ++ E+   N  PN+VT++ ++ G S++G    
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALL 245
           A+++  +   RG  P+  TY  +I   C+  +   A +L  ++       PD + Y +L+
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            G C    ++EA+A L      G  P   +++ L+   F
Sbjct: 603 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 103/226 (45%), Gaps = 10/226 (4%)

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY  +I    +   ++    + +++++ G+      +  +ING +RV   E A ++F ++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-V 616
            + GC P+  +Y  L+       KF +   L+    +D    +  +   + + L K + V
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           + A +  +EM  K        YT  +  LC+ G++ +A  +       +   + P    L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAG-----RFKPSVPVYNAL 250

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKD 720
           I G+CK G +++A+ +    + NG  + P V +Y  ++ SL  S +
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNG--VDPNVVSYSCIINSLCVSGN 294


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 195/666 (29%), Positives = 327/666 (49%), Gaps = 37/666 (5%)

Query: 113 DCEKALESFG----KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK---LNCL 165
           D ++  E+ G    +M E  C P+V  YN +L     +     AL + + M      +C 
Sbjct: 142 DAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCP 201

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+V+++ +ING    G+ + A  +  +MT +GI PN  TYTIVI GLC+    D A  +
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M D G  P+ V Y  L++G+  + +  E + +L+     G  P   +Y  L+D L +
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  EA   +  M  + I+PDV +YG+++ G +  G + +    L  M   GI P+ Y 
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYI 381

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N +   F    ++ +A  +  ++ ++   PN   +  LI  +C+ G VDDA+  FN+M 
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS-L 464
             G  P++ +F +L+ GLC   + EKA  LF++M           ++QG   +H      
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEM-----------VNQG---IHPNVVFF 487

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++   CT G + KA +++  +   G  PDII+YN+LI G C VG  + A KL   +  
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            GL+P+  TY TL++G  R  R +DA+ +F +M  NG TP    Y +++    + R+FS 
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL--NDFQ--LAPYTI 640
           A  L   YL  I+     S+ +    L      N +   L+M   L   D Q  +  + I
Sbjct: 608 AKEL---YLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKN 699
            +  L +DG+ ++A+N+F+  +    +V   +  +LI   L + G L+    +F    K+
Sbjct: 665 MIGALLKDGRKEDAMNLFAT-ISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKS 723

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTR 759
           G      + N+L+R LL   D  +  AY  L ++    + L+A     T S+L   ++  
Sbjct: 724 GCAPNSLMLNFLVRRLLLRGDISRAGAY--LSKIDEKNFSLEA----STTSMLISLFSRE 777

Query: 760 EMENMS 765
           E +  S
Sbjct: 778 EHQAKS 783



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 245/526 (46%), Gaps = 52/526 (9%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           L+     ++RS   ++VS  +  +I+G++  G  +KA   F  M +    P+V  Y  V+
Sbjct: 189 LHMMADGQVRSCPPNLVS--YNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVI 246

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   + Q+   A  V+ +M+     PNIVT++ LI+G    G+ +  ++ML EM+  G+ 
Sbjct: 247 DGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLE 306

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY +++  LC+  +  EA +LF  M   G  PD   Y  +L+G+     + E  + 
Sbjct: 307 PDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSF 366

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L     +G  P    ++ +     +     EA   + KM ++ + P+VV Y  +I  L +
Sbjct: 367 LDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCK 426

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+V DA    + M   G+ P+   + +L+ G C +   ++A  L  E+  +   PN   
Sbjct: 427 LGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN-LLFYKM 439
           F  ++C +C  G V  AQ+L + ME+ G  P +  +NALI G C  G+ ++A+ LL   +
Sbjct: 487 FNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIML 546

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            +G  P              ++ +  T++  YC  G I  AY +  ++  +G  P ++TY
Sbjct: 547 SVGLKP--------------NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTY 592

Query: 500 NS-----------------------------------LINGFCKVGNINGALKLFKELQL 524
           N+                                   ++NG  K   ++ ALK+F+ L  
Sbjct: 593 NTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCS 652

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           K L+ D +T+  +I  L +  R+EDA  +F  +  NG  P    Y+
Sbjct: 653 KDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYR 698



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 233/521 (44%), Gaps = 27/521 (5%)

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLF-LKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           + P+ FTY+I++   C++ R +  +  F L +K      D V  N LL G C  +RV EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 258 LA-LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE---PDVVLYGV 313
           +  LLR   + G  P + SY+ L+ G     R +EA      M + ++    P++V Y  
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G    G+V  A  L  DM ++GI P+   Y  +I G C   ++D+A  +  ++  + 
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  T+T LI G    G   +  ++  +M   G  P    +  L+D LCK G+  +A 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            LF  M   G  P              D +    ++  Y T G + + +  L  +  +G 
Sbjct: 330 KLFDSMIRKGIKP--------------DVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+   +N +   F K   I  A+ +F +++ +GL P+ V Y TLI+ L ++ R +DA  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE-EFL 611
            F QM   G  P+  V+ SL+   C   K+  A  L+ + +      +     +I     
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
            +G V  A + +  M+       +  Y   + G C  G+  EA  +  +++     + P 
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG--LKPN 553

Query: 672 SCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            C    L+HG C+ G +D A  VF   L NG  + P V  Y
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG--ITPVVVTY 592



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 214/506 (42%), Gaps = 59/506 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY  +G  ++ +    +M     +PD + Y  +L+   +K     A  ++  M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P++  + ++++G +  G        LD M   GI PN + + IV     +    
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +F KM+  G SP+ V Y  L++  CKL RVD+A         +G  P +  ++ L
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL    ++++A   + +M  + I P+VV +  ++  L   G+V  A +L+  M   G 
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT 515

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YNALI+G C +G  D+A  L   +      PN  T+  L+ G CR+G +DDA  
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYS 575

Query: 400 LFNKMEKAGCFP-----------------------------------SVGMFNALIDGLC 424
           +F +M   G  P                                   S+  +N +++GL 
Sbjct: 576 VFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLS 635

Query: 425 KAGELEKA--------------NLLFYKMEIGK---------NPTLFLRLSQGGNRVHDK 461
           K   +++A              +++ + + IG             LF  +S  G  V D 
Sbjct: 636 KNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG-LVPDV 694

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            + + + E     G + +   +  ++ +SG  P+ +  N L+      G+I+ A     +
Sbjct: 695 TTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSK 754

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDRE 547
           +  K    ++ T   LI+   R + +
Sbjct: 755 IDEKNFSLEASTTSMLISLFSREEHQ 780



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 171/355 (48%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD +    +S    +F ++   + K     +A++ F KM++    P+V  Y  +++   +
Sbjct: 367 LDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCK 426

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A   + +M+     PNIV F+ L+ GL    K E A ++  EM  +GI PN   
Sbjct: 427 LGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVF 486

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  ++  LC   R  +A RL   M+  G  PD ++YNAL+ G C + + DEA  LL    
Sbjct: 487 FNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIML 546

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P   +Y+ L+ G  R  R D+AY+ +++M    I P VV Y  ++ GL +  +  
Sbjct: 547 SVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFS 606

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +L  +M   G     Y YN ++ G      +D+A  +   +  +D   +  TF I+I
Sbjct: 607 EAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMI 666

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + ++G  +DA  LF  +   G  P V  +  + + L + G LE+ + +F +ME
Sbjct: 667 GALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D  +    E+ S  ++ V   +  ++ G +K     +A E +  M     Q  +Y YN 
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +LN   +      AL ++  +   +   +I+TF+++I  L K G+ E A+ +   ++  G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           ++P+  TY ++   L +    +E   +F +M+ SGC+P+ +  N L+        +  A 
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAG 749

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFR----AKRYDEAYAW 295
           A L   ++  F     + S LI    R    AK   E Y +
Sbjct: 750 AYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHF 790



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 144/352 (40%), Gaps = 66/352 (18%)

Query: 394 VDDAQKL-----------------------------------------FNKMEKAGC--- 409
           VDDA KL                                         FN+M +  C   
Sbjct: 31  VDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKV 90

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V  ++ L+   C+ G LE     F          L L+    G RV+D   +  +++
Sbjct: 91  APDVFTYSILVGCFCRMGRLEHGFAAF---------GLILKT---GWRVNDVVVVNRLLK 138

Query: 470 QYCTAGLIHKAYKILM-QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL---QLK 525
             C A  + +A  +L+ +++E G  P++++YN+L+ GFC       AL+L   +   Q++
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
              P+ V+Y T+ING     + + A+ +F  M   G  P+   Y  ++   C+ +    A
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
             ++ Q + D   R +    +  I  +L  G+ +  ++ L EM     +     Y + L 
Sbjct: 259 EGVFQQMI-DKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFL 694
            LC+ G+  EA  +F  ++  K I    S   +I HG   +G L   M  FL
Sbjct: 318 YLCKKGKCTEARKLFDSMIR-KGIKPDVSIYGIILHGYATKGALS-EMHSFL 367


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 166/497 (33%), Positives = 272/497 (54%), Gaps = 24/497 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G    G  + A+E + +M     +PDV  YN ++N         +A+ V+ +M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C PN+VT++ +I+ L K      A+  L EM  RGI P+  TY  ++ GLC + + 
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA RLF +M+ +GC PD V YN +++   K R V++A   L      G  P + +Y+ +
Sbjct: 285 NEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI 344

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL    + +EA   ++KM ++  +PDVV Y  +I  L +   V DAM+ LS+M +RGI
Sbjct: 345 LHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGI 404

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y+ ++ GFC+LG LD+A  L  E+  R+ +PNT TF+IL+ G+C+ GMV +A+ 
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARW 464

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN--PTL--FLRLSQG- 454
           +F  M + G  P++  +NAL++G C   ++ +A  +F  M +GK   P L  +  L  G 
Sbjct: 465 VFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM-VGKGCAPDLHSYNILINGY 523

Query: 455 -GNRVHDKA-----------------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
             +R  DKA                 +  T+++  C  G +  A ++  ++  SG LP +
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TY+ L+NG CK G+++ ALKLFK ++ K L PD + Y  LI G+    + E A  +F +
Sbjct: 584 MTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSK 643

Query: 557 MPQNGCTPSPAVYKSLM 573
           +  +G  P    Y  ++
Sbjct: 644 LSADGIQPPGRTYNVMI 660



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/543 (28%), Positives = 275/543 (50%), Gaps = 14/543 (2%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA +Y M ++N  P+IV F   +  ++K  +    + + ++M   G+    ++  I+I+
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC++N  D A  ++ KM   G  PD + +  L+NG C   ++  A+ L     + G  P
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEP 196

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + SY+ LI+GL  +   + A   ++KM +   +P+VV Y  +I  L +   V DAM  L
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M  RGI PD   YN+++ G C LG L++A  L   + +    P+  T+ I+I  + ++
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            +V+DA    ++M   G  P V  +  ++ GLC  G+L +A  LF KME           
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME----------- 365

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            Q G +  D  +  T+++  C   L++ A + L ++ + G  P+ +TY+++++GFC +G 
Sbjct: 366 -QKGCK-PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A +LFKE+  + + P+++T+  L++GL +     +A  +F  M + G  P+   Y +
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKL 630
           LM   C R K + A  ++   +      D  S    I  +     ++ A   L +M  K 
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y   + GLC  G++ +A  +F  +     + T  +   L++GLCK G+LD A+
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603

Query: 691 DVF 693
            +F
Sbjct: 604 KLF 606



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 219/422 (51%), Gaps = 15/422 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G   +G   +A   F +M++  C+PDV  YN +++  ++ +L   A     EMV   
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ +++GL   G+   AI++  +M Q+G  P+   Y  +I  LC+    ++A 
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAM 393

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
               +M D G  P+ V Y+ +L+GFC L ++DEA  L +       +P   ++S L+DGL
Sbjct: 394 EFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     EA   +  M E+ +EP++  Y  ++ G     K+ +A K+   M  +G  PD 
Sbjct: 454 CQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDL 513

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + YN LI G+C+   +D+A++L  ++  +   PNT T+  ++ G+C  G + DAQ+LF K
Sbjct: 514 HSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKK 573

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKA 462
           M  +G  P++  ++ L++GLCK G L++A  LF  M+  K  P + L             
Sbjct: 574 MCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIIL------------- 620

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++E     G +  A  +  +L+  G  P   TYN +I G  K G  + A +LF++ 
Sbjct: 621 -YTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKW 679

Query: 523 QL 524
           ++
Sbjct: 680 KM 681



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 186/345 (53%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G   +G   +A+  F KM++  C+PDV  YN +++   + +L   A+    EM
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN VT+S +++G    G+ + A ++  EM  R ++PN  T++I++ GLCQ    
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +F  M + G  P+   YNAL+NG+C   +++EA  +       G  P L SY+ L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G   ++R D+A A   +M  +K+ P+ V Y  +++GL   G++ DA +L   M   G+
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P    Y+ L+ G C  G LD+A  L   + ++   P+   +TILI GM   G ++ A+ 
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           LF+K+   G  P    +N +I GL K G  ++A  LF K ++ K+
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKH 684



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 200/441 (45%), Gaps = 14/441 (3%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           VD+ALA      +    P +  +   +  + + K+Y        +M    +   V    +
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I  L     V  A+ +   M + GI PD   +  LI G C+ G +  A  L  E+ +  
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  ++  LI G+C +G  + A  +F KME+ GC P+V  +N +ID LCK   +  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA- 252

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                M+       FL    G     D  +  ++V   C  G +++A ++  ++ ++G  
Sbjct: 253 -----MD-------FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCK 300

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TYN +I+   K   +N A     E+  +G+ PD VTY T+++GL  + +  +A R+
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRL 360

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQ 612
           F +M Q GC P    Y +++   C+ R  + A     + + R I          +  F  
Sbjct: 361 FKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCN 420

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G+++ A Q   EM  +        ++I + GLCQ+G V EA  +F  + E        +
Sbjct: 421 LGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYT 480

Query: 673 CVKLIHGLCKRGYLDLAMDVF 693
              L++G C R  ++ A  VF
Sbjct: 481 YNALMNGYCLRCKMNEARKVF 501



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 9/264 (3%)

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++A     P I+ +   +    K+   +  + L  ++ L G+     +   LIN L R++
Sbjct: 83  RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
             + A  ++G+M + G  P    + +L+   C   K  +A  L+ + +R     D  S  
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           + I      G    A+    +M+       +  Y   +  LC+D  V +A++  S +V  
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVG- 261

Query: 665 KAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
           + I  PP  +    ++HGLC  G L+ A  +F    +NG   +P V  Y +      KD 
Sbjct: 262 RGI--PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG--CKPDVVTYNIIIDSLYKDR 317

Query: 722 KKVHAYHLLCRMKSVGYDLDACLY 745
               A   L  M   G   D   Y
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTY 341


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 191/622 (30%), Positives = 313/622 (50%), Gaps = 32/622 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  K    ++A E F +MK     PDV  Y ++++   R   +  A  ++ EM+
Sbjct: 124 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEML 183

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +    ++ T S+LI+ L K GK   A ++L+ M QRG + +  TY+ +I GLC  +R  
Sbjct: 184 DVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRIS 243

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG------FVPRLG 274
           EA RLF+ M+  GC PD +AY  L+ G C+   ++ AL L +    D         P L 
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SYS +IDGL + +R DEA   +++M  + I PDV+ Y  +I G   +GK + A  L ++M
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + GI PD    + LI   C  G + +A  L   + +R  +P+  T T L+ G+C    +
Sbjct: 364 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI 423

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
             A +LF KM+K GC P+V     L+ GLC++G ++ A  L   M    +P        G
Sbjct: 424 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP-------YG 476

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
            N   +  S   +++  C  G   +A ++  ++   G +PD+I+Y SLI+GFC+ G    
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 536

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  LF E+   G++PD  T+  LI+ L +  +  +A  +   M Q GC P+   Y +L+ 
Sbjct: 537 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 596

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQ---------GLL 624
             C   + S A  L+++  +     D  +  ++ + L Q G ++ A++         G  
Sbjct: 597 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLC 681
             +FK +   +  Y+I + GLC+ G+  EA  +F    E KA+   P+ +    LIHG C
Sbjct: 657 GTNFKPD---VISYSIIIDGLCKHGREDEARELFK---EMKALGVIPNVISYTSLIHGFC 710

Query: 682 KRGYLDLAMDVFLYTLKNGFIL 703
           + G L+ A  +F   +  G  L
Sbjct: 711 RSGKLEDAKHLFNEMVDQGVQL 732



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 180/665 (27%), Positives = 315/665 (47%), Gaps = 66/665 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  S S +I  L K    D   +   E+++  +      +  LI G+ + G  EKA   F
Sbjct: 120 TLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLF 179

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M +   + DV   + +++I  ++   + A  +   M++  C+ +IVT+S LI GL   
Sbjct: 180 NEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMK 239

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSG-----CS 235
            +   A ++   M + G  P+   Y  ++ GLCQ    + A +L  +M  D+G     C 
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCK 299

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  ++Y+ +++G CK RR DEA  L +  +  G +P + SY+ LI G   + ++++A   
Sbjct: 300 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M +  I+PDV    V+I  L + GKV +A KLL  + +RG +PD      L+KG C 
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK------AGC 409
              + +A  L +++ K   +PN  T   L+ G+C++G +  A +L   M          C
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P+   ++ +IDGLCK G  ++A  LF +M+ +G  P              D  S  +++
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP--------------DVISYTSLI 525

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             +C +G    A  +  ++ + G  PD+ T++ LI+  CK G +  A +L + +  +G  
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P++VTY TL+ GL   DR  +A ++F +M + GC P    Y +LM   C+      A  L
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 589 WLQYLRDIS-----------------------GRDDESMKSIEEFLQKGEVENAIQGLLE 625
             + L D                         GR+DE+ +  +E    G + N I     
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI----- 700

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       YT  + G C+ G++++A ++F+ +V+    +   +   +IHG CK G 
Sbjct: 701 -----------SYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749

Query: 686 LDLAM 690
           +D A+
Sbjct: 750 IDKAL 754



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 193/707 (27%), Positives = 339/707 (47%), Gaps = 50/707 (7%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           VLI  + K G   +A E    M +  C  D+  Y+ ++     K     A  ++  M KL
Sbjct: 15  VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAI----KMLDEMTQRGI--LPNKFTYTIVISGLCQI 216
            C P+ + +  L+ GL ++GK  +A+    +ML++ +Q GI   P   +Y+I+I GLC+ 
Sbjct: 75  GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKD 134

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R DEA  LF +MK  G  PD ++Y +L++GFC+  + ++A  L       G    + + 
Sbjct: 135 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTS 194

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S LID L +  +  EA      M +     D+V Y  +I+GL    ++ +A +L   M++
Sbjct: 195 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI------WKRDSLPNTHTFTILICGMCR 390
            G  PD   Y  L+KG C  G ++ A  L  E+      +     P   +++I+I G+C+
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP---- 445
           +   D+A++LF +M+  G  P V  +  LI G C +G+ EKA  LF +M ++G  P    
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374

Query: 446 --TLFLRLSQGGNRVH---------------DKASLQTMVEQYCTAGLIHKAYKILMQLA 488
              L   L + G  +                D  +  T+V+  C    I KA ++ +++ 
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK------GLRPDSVTYGTLINGLQ 542
           + G +P+++T  +L+ G C+ GNI  AL+L K +           +P++++Y  +I+GL 
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  RE++A  +F +M   G  P    Y SL+   CR  K+  A  L+ + + DI  + D 
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV-DIGVQPDV 553

Query: 603 SMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
           +  S  I+   ++G+V  A + L  M  +        YT  + GLC + ++ EA  +F  
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN----GFILRPRVCNYLLRSLL 716
           + +   +    +   L+ GLC+ G +  A+++    L +    G   +P V +Y +    
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
             K  ++  A  L   MK++G   +   Y    SL+ G   + ++E+
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYT---SLIHGFCRSGKLED 717



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 246/466 (52%), Gaps = 15/466 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  K    ++A E F +MK     PDV  Y  +++       +  A  ++ EM+
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +   P++ T S+LI+ L K GK   A K+L+ + QRG +P+  T T ++ GLC  +R  
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD------GFVPRLG 274
           +A +LFLKM+  GC P+ V    L+ G C+   +  AL L ++   D         P   
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SYS +IDGL +  R DEA   +++M    + PDV+ Y  +I G   +GK KDA  L ++M
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G+ PD   ++ LI   C  G + +A  L   + +R  +PNT T+T L+ G+C N  +
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            +A +LF KM+K GC P V  +  L+ GLC+ G ++ A  L  KM       L      G
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM-------LSDTGQYG 657

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
            N   D  S   +++  C  G   +A ++  ++   G +P++I+Y SLI+GFC+ G +  
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           A  LF E+  +G++ ++VTY  +I+G  +  + + A  +F +M  N
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/595 (28%), Positives = 287/595 (48%), Gaps = 42/595 (7%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+ +   P++ T  +LI+   K GK   A ++L+ M QRG + +  TY+ +I GLC  +R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV------PR 272
             EA +LF+ MK  GC PD +AY  L+ G C+  +++ AL L +    D         P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L SYS +IDGL + +R DEA   +++M  + + PDV+ Y  +I G   +GK + A  L +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M + GI  D    + LI   C  G + +A  L   + +R  + +  T++ LI G+C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--EIGK-----NP 445
            + +A +LF  M+K GC P    +  L+ GLC+ G +  A  L  +M  + G+      P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           TL               S   +++  C      +A ++  ++   G +PD+I+Y +LI+G
Sbjct: 301 TLI--------------SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           FC  G    A  LF E+   G++PD  T   LI+ L +  +  +A ++   + Q GC P 
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLL 624
                +L+   C + + S A  L+L+  +     +  +  ++ + L Q G ++ A++   
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466

Query: 625 EM--DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---K 675
            M  D         P    Y+I + GLC+ G+  EA  +F    E KA+   P  +    
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK---EMKALGVIPDVISYTS 523

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           LIHG C+ G    A  +F   +  G  ++P V  + +   +  K+ K + A  LL
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIG--VQPDVTTFSVLIDMLCKEGKVIEANELL 576


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 183/666 (27%), Positives = 313/666 (46%), Gaps = 66/666 (9%)

Query: 7   EVLTILDTVTPIEPALEPLLPF---LSKTTVTSVIMKTKNPQVGFRFFIWAAKRK--RLR 61
           E L +LD+    E A   L  F   L  + V  V+ +  +     +FF W   +   +  
Sbjct: 72  EFLRVLDSSEDFELASRRLCEFGGYLVPSVVGRVLQQLDDLDKAVKFFDWCTGQPGYKHS 131

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            F  N  + + + K    + Y       R G  S  S  +  LI+G+ K  D ++A    
Sbjct: 132 KFTCNCLLSAFVRKKKAQEAY-DLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLL 190

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M++    P   +YN ++           AL V+Y  ++ NC P+++T+++L++ L KS
Sbjct: 191 DEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDALCKS 249

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            +   A  +L++M + G  PN  TY  +I+G C++   DEA  LF +M ++ CSPD   Y
Sbjct: 250 ARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTY 309

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY------------ 289
           N L++G+CK  R  +   LL+   K G  P   +Y+ L+D L ++ +Y            
Sbjct: 310 NILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR 369

Query: 290 -----------------------DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
                                  D AY  ++ M +    PD+  Y +MI G   A ++ D
Sbjct: 370 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 429

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +LL  M E G  PD   YN+++ G C    +D+A  +   +       +  T + LI 
Sbjct: 430 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 489

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G+C++  +DDA+KL  +ME+ G  P V  +  LI G CKA +L+K+   F +M + G  P
Sbjct: 490 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 549

Query: 446 TLFL------RLSQGGNRVHDKAS-LQTMVEQ---------------YCTAGLIHKAYKI 483
           T+        +L +   RV D    L+TM+E+                C +    +AY++
Sbjct: 550 TVITYSIVIDKLCKSA-RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              + ++G  P ++TYN L++  CKV  ++ A+ L + ++  G  PD+VTY ++ +G  +
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               + AFR+F  M   GC+P+P +Y  L+T      K   A  +W + L   +  D E 
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728

Query: 604 MKSIEE 609
            +++++
Sbjct: 729 SRTLQQ 734



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 162/547 (29%), Positives = 255/547 (46%), Gaps = 70/547 (12%)

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           +CL+    R K+  EAY  ++        PD + Y  +I G  +A   + A +LL +M +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RGIVP    YN +IKG CD G +D A  +     +R+  P+  T+TIL+  +C++  + D
Sbjct: 196 RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTILVDALCKSARISD 254

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQ 453
           A  +   M +AGC P+V  +N LI+G CK G +++A +LF +M E   +P +F    L  
Sbjct: 255 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 314

Query: 454 G---GNRVHDKASL-QTMVEQYCTAGLIHKAYKILM-QLAESG------NL--------- 493
           G     R  D A L Q MV+  C    I   Y  LM  L +SG      NL         
Sbjct: 315 GYCKQERPQDGAKLLQEMVKYGCEPNFI--TYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 372

Query: 494 -PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P   T+N +I+ FCKVG ++ A +LF+ +  +G  PD  TY  +I+G  R +R +DA +
Sbjct: 373 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 432

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEF 610
           +  +M + GC P    Y S+++  C+  +   A+ ++ + LR+     D    S  I+  
Sbjct: 433 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY-EVLRNGGYFLDVVTCSTLIDGL 491

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE------- 663
            +   +++A + L EM+   +   +  YTI + G C+  Q+ ++L  FS +++       
Sbjct: 492 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 551

Query: 664 ----------CKAI----------------VTPPSCV--KLIHGLCKRGYLDLAMDVFLY 695
                     CK+                 VTP + V   +I GLCK    D A +  LY
Sbjct: 552 ITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE--LY 609

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGP 755
            L       P V  Y +      K ++   A HLL  M+S G   D   Y    S+  G 
Sbjct: 610 KLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY---NSVFDGF 666

Query: 756 WNTREME 762
           W + E +
Sbjct: 667 WKSAEHD 673


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 175/593 (29%), Positives = 287/593 (48%), Gaps = 47/593 (7%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           NVS  S  + +LI G  K G    A + F K+      P    Y ++++       F  A
Sbjct: 5   NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++ +M +  C P+ VT++++I+   K G  E A  ++ +M + G +P+  TY  V+ G
Sbjct: 65  RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+  R +EA  LF +M+  GC+P+  ++N ++ G C+  ++D+A  +    E     P 
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             SY  LIDGL +A + +EAY  +R+M +  I P  V Y V+I G+  A  + +A++L  
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            MR +G  P  + +N LI   C  G +D+A  L   +     +P+  T++ LI G+C   
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            VDDA+ L   M K  C P+V   N LI GLCKAG +++A  +   M   G++P      
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP------ 358

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +  T+V  +C AG   +A ++L  +   G  P+++TY +L++G CK   
Sbjct: 359 --------DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A  +F +++  G  P+  TY  LI G     + +   ++FG+M   G +P   VY +
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L    C+  + + A    L+ LR+  GR  ES++S  E         A+ GLL+      
Sbjct: 471 LAAELCKSGRSARA----LEILRE--GR--ESLRS--EAWGDEVYRFAVDGLLDA----- 515

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                            G+++ AL     +V    +  P  C  L+ GLCK G
Sbjct: 516 -----------------GKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 195/415 (46%), Gaps = 55/415 (13%)

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M E  + PD   YG++I GL++AGK+ DA  L   +   G+ P T  Y +LI G C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            D AR L  ++ +R   P+  T+ ++I   C+ GM+++A  L  KM + G  P V  +N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 419 LIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ++DGLCK+G +E+A LLF +ME +G  P              ++ S  T++   C    I
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTP--------------NRRSHNTIILGLCQQSKI 166

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A ++  ++      PD  +Y  LI+G  K G +N A KLF+ +   G+ P +VTY  +
Sbjct: 167 DQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+G+      ++A  +F  M   GC PS   +  L+   C+R                  
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR------------------ 268

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G+ DE+ + ++     G V + +                 Y+  + GLC   +V +A ++
Sbjct: 269 GKMDEAFRLLKRMTDDGHVPDVVT----------------YSTLISGLCSIARVDDARHL 312

Query: 658 FSVLV--ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              +V  +CK  V   +   LIHGLCK G +  A +V    + +G    P V  Y
Sbjct: 313 LEDMVKRQCKPTVVTQN--TLIHGLCKAGRIKEAREVLDAMVSSG--QSPDVVTY 363



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 199/458 (43%), Gaps = 46/458 (10%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S++ +I  L + +  D   Q   E+ + ++   S  + +LI G  K G   +A + F +M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    P    YN V++          AL ++  M    C P+  TF++LI+   K GK 
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L  MT  G +P+  TY+ +ISGLC I R D+A  L   M    C P  V  N L
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G CK  R+ EA  +L +    G  P + +Y+ L+ G  RA + + A      M    +
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+VV Y  ++ GL +A ++ +A  + + M+  G  P+ + Y ALI GFC          
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA-------- 443

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
                                      G VD   KLF +M  AG  P   ++  L   LC
Sbjct: 444 ---------------------------GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELC 476

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K+G   +A      +EI +     LR    G+ V+  A     V+    AG +  A   +
Sbjct: 477 KSGRSARA------LEILREGRESLRSEAWGDEVYRFA-----VDGLLDAGKMEMALGFV 525

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
             +   G LP      SL+ G CK G    A  + +E+
Sbjct: 526 RDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 9/264 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR+   +  + + +I  L K        + LD + S   S     +  L+ G+ + G  E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A E    M      P+V  Y A+++   +      A  V+ +M    C PN+ T++ LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G   +G+ +  +K+  EM   GI P+   Y  + + LC+  R+  A  +  + ++S  S
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497

Query: 236 PDF--VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             +    Y   ++G     +++ AL  +R   + G +P     + L+ GL ++ +  EA 
Sbjct: 498 EAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA- 556

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRG 317
              R + EE ++   + YG   RG
Sbjct: 557 ---RAVLEEIMD---LAYGGKARG 574


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 176/593 (29%), Positives = 287/593 (48%), Gaps = 47/593 (7%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           NVS  S  + +LI G  K G    A   F K+      P    Y ++++       F  A
Sbjct: 5   NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++ +M +  C P+ VT++++I+   K G  E A  ++ +M + G +P+  TY  V+ G
Sbjct: 65  RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+ +R +EA  LF +M+  GC+P+  ++N ++ G C+  ++D+A  +    E     P 
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             SY  LIDGL +A + +EAY  +++M +  I P  V Y V+I G+  A  + +A++L  
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            MR +G  P  + +N LI   C  G LD+A  L   +     +P+  T++ LI G+C   
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            VDDA+ L   M K  C P+V   N LI GLCKAG +++A  +   M   G++P      
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP------ 358

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +  T+V  +C AG   +A ++L  +   G  P+++TY +L++G CK   
Sbjct: 359 --------DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A  +F +++  G  P+  TY  LI G     + +   ++FG+M   G +P   VY +
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L    C+  + + A    L+ LR+  GR  ES++S  E         A+ GLLE      
Sbjct: 471 LAAELCKSGRSARA----LEILRE--GR--ESLRS--EAWGDEVYRFAVDGLLEA----- 515

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                            G+++ AL     +V    +  P  C  L+ GLCK G
Sbjct: 516 -----------------GKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 169/572 (29%), Positives = 282/572 (49%), Gaps = 24/572 (4%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +++I  L   N FD   +   ++           + V+I    K G  E+A +  
Sbjct: 44  STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLI 103

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            KM E    PDV  YN V++   +      AL ++ EM +L C PN  + + +I GL + 
Sbjct: 104 KKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQ 163

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            K + A ++  EM  + I P+ ++Y I+I GL +  + +EAY+LF +M DSG +P  V Y
Sbjct: 164 SKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTY 223

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N +++G C    +DEAL L +S    G  P   +++ LID   +  + DEA+   ++M +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +   PDVV Y  +I GL    +V DA  LL DM +R   P     N LI G C  G + +
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           AR +   +      P+  T+  L+ G CR G  + A++L + M   G  P+V  + AL+ 
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 403

Query: 422 GLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLCKA  L +A  +F +M+  G  P LF              +   ++  +C+AG +   
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLF--------------TYTALILGFCSAGQVDGG 449

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS---VTYGTL 537
            K+  ++  +G  PD + Y +L    CK G    AL++ +E + + LR ++     Y   
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGR-ESLRSEAWGDEVYRFA 508

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ++GL    + E A      M + G  P+P    SL+   C+  +   A ++ L+ + D++
Sbjct: 509 VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAV-LEEIMDLA 567

Query: 598 --GRD-DESMKSIEEFLQKG-EVENAIQGLLE 625
             G+   ++ K +EE + KG E+E+A+ G L+
Sbjct: 568 YGGKARGKAAKFVEEMVGKGYEIEDAVLGPLK 599



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 194/415 (46%), Gaps = 55/415 (13%)

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M E  + PD   YG++I GL++AGK+ DA  L   +   G+ P T  Y +LI G C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            D AR L  ++ +R   P+  T+ ++I   C+ GM+++A  L  KM + G  P V  +N 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 419 LIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ++DGLCK+  +E+A LLF +ME +G  P              ++ S  T++   C    I
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTP--------------NRRSHNTIILGLCQQSKI 166

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A ++  ++      PD  +Y  LI+G  K G +N A KLF+ +   G+ P +VTY  +
Sbjct: 167 DQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+G+      ++A  +F  M   GC PS   +  L+   C+R                  
Sbjct: 227 IHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR------------------ 268

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G+ DE+ + ++     G V + +                 Y+  + GLC   +V +A ++
Sbjct: 269 GKLDEAFRLLKRMTDDGHVPDVVT----------------YSTLISGLCSIARVDDARHL 312

Query: 658 FSVLV--ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              +V  +CK  V   +   LIHGLCK G +  A +V    + +G    P V  Y
Sbjct: 313 LEDMVKRQCKPTVVTQN--TLIHGLCKAGRIKEAREVLDAMVSSG--QSPDVVTY 363



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 9/264 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR+   +  + + +I  L K        + LD + S   S     +  L+ G+ + G  E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A E    M      P+V  Y A+++   +      A  V+ +M    C PN+ T++ LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G   +G+ +  +K+  EM   GI P+   Y  + + LC+  R+  A  +  + ++S  S
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497

Query: 236 PDF--VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             +    Y   ++G  +  +++ AL  +R   + G +P     + L+ GL ++ +  EA 
Sbjct: 498 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA- 556

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRG 317
              R + EE ++   + YG   RG
Sbjct: 557 ---RAVLEEIMD---LAYGGKARG 574


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 178/611 (29%), Positives = 301/611 (49%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+T ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A++L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   ++++IDG CK   L+ A  +FY M   G +P L              
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GF  VG++N AL L +E
Sbjct: 397 -TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   GL PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I+   ++  ++ A Q    M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +T  + G C+ G+V + L +F  +     +    + + LI G  K G ++ A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 273/574 (47%), Gaps = 59/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +  +L+    +     AL ++++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+VTF+ L+NGL + G+   A+ +LD M + G+ P + TY  ++ G+C+     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++  CK  R  +A  L    ++ G  P L +Y+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+ +A    ++M E KI PDVV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  Y+++I GFC    LD A  +   +  +   PN  TF  LI G C    +DD  +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G    G+L  A  L  +M           +S G     
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM-----------ISSG--LCP 463

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V NAI        
Sbjct: 584 FTTLINGYCK------------------AGRVDDGLELFCEMGRRGIVANAIT------- 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 619 ---------YITLICGFRKVGNINGALDIFQEMI 643



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 255/512 (49%), Gaps = 27/512 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP    Y  +++   +K   + AL +  +M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            ++ + +PN+V +S +I+ L K G+   A  +  EM ++GI P+ FTY  +I G C   R
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A +L  +M +   SPD V YNAL+N F K  +  EA  L       G +P   +YS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   P+++ +  +I G   A ++ D M+LL +M E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V DT  YN LI GF  +G L+ A  L  E+      P+  T   L+ G+C NG + DA 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-----PHR 540

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++   +      P+++T+ +LING+C
Sbjct: 541 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  +++TY TLI G ++V     A  IF +M  +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
             ++++T  WS    K ++A    LQ   D+S
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKLQMSMDLS 684



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 230/503 (45%), Gaps = 95/503 (18%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF------------------ 127
           LD +    +      +  ++ G  K GD   AL    KM+E                   
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 128 ------DCQ------------PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                 D Q            PD++ YN+++        +  A  +  EM++    P++V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LIN   K GK   A ++ DEM  RGI+PN  TY+ +I G C+ NR D A  +F  M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GCSP+ + +N L++G+C  +R+D+ + LL    + G V    +Y+ LI G +     
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-----------RG 338
           + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++            G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+C+   +D+A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++F+ M      P+V  F  LI+G CKAG                             RV
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAG-----------------------------RV 597

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D       +E +C             ++   G + + ITY +LI GF KVGNINGAL +
Sbjct: 598 DDG------LELFC-------------EMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 519 FKELQLKGLRPDSVTYGTLINGL 541
           F+E+   G+ PD++T   ++ GL
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGL 661



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 11/369 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L E+    +S     +  LI+ + K G   +A E + +M      P+   Y+++++  
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A  ++Y M    C PN++TF+ LI+G   + + +  +++L EMT+ G++ + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I G   +   + A  L  +M  SG  PD V  + LL+G C   ++ +AL + + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 264 FEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI GL +  ++ +A ++   M  +   P+   +  LI G+C  G +D    L  E+ +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             + N  T+  LICG  + G ++ A  +F +M  +G +P       ++ GL    EL++A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 433 NLLFYKMEI 441
             +  K+++
Sbjct: 671 VAMLEKLQM 679



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/540 (23%), Positives = 231/540 (42%), Gaps = 60/540 (11%)

Query: 214 CQINRADEAYRLFL---------KMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRS 263
           C  + A+ A RLF          K     C   F   +  L +GF +++ +++A+ L   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 69

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   +P +  +  L+  + R +R D   + Y+KM  ++I  D+  + ++I+      K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSK 129

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+     + + G+ PD   +  L+ G C    + +A +L  ++++    PN  TFT 
Sbjct: 130 LPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 189

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G + +A  L ++M + G  P+   +  ++DG+CK G+   A  L  KME   
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME--- 246

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                    +  + + +      +++  C  G    A  +  ++ E G  PD+ TYNS+I
Sbjct: 247 ---------EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G  + A +L +E+  + + PD VTY  LIN   +  +  +A  ++ +M   G  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y S++   C++ +   A  ++  YL                   KG   N I   
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF--YL----------------MATKGCSPNLIT-- 397

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         +   + G C   ++ + + +   + E   +    +   LIHG    
Sbjct: 398 --------------FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYDLDA 742
           G L+ A+D+    + +G       C+ LL  L    DN K+  A  +   M+    DLDA
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC---DNGKLKDALEMFKVMQKSKKDLDA 500



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 11/361 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +RK      + +A+I+  +K   F    +  DE+    +   +  +  +I G+ K    +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   F  M    C P++  +N +++     +     + + +EM +   + +  T++ LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--- 232
           +G    G    A+ +L EM   G+ P+  T   ++ GLC   +  +A  +F  M+ S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 233 --------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                   G  PD   YN L++G     +  EA  L       G VP   +YS +IDGL 
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA   +  M  +   P+VV +  +I G  +AG+V D ++L  +M  RGIV +  
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GF  +G ++ A  +  E+      P+T T   ++ G+     +  A  +  K+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677

Query: 405 E 405
           +
Sbjct: 678 Q 678


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 268/510 (52%), Gaps = 15/510 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK- 125
            A+I  L K       +   +E R+         +  +I G  K G  E AL  +  M  
Sbjct: 34  GALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAI 93

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
            F  +P V  Y+ +++   R         +  EM    C PN VT++ L+N L   G+++
Sbjct: 94  HFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSK 153

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF--LKMKDSGCSPDFVAYNA 243
            A  +L++M   G  P   T+ ++I GLC+    + A+R+   + M +SG SPD + +N+
Sbjct: 154 EAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNS 213

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +L+G CK +R+ +A  + +   + G  P + +YS LIDGL +  + DEA     KM E  
Sbjct: 214 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
              + V Y  ++ GL + G+++DA+ +L  MR+ G +PD   YN LI GF     L +A 
Sbjct: 274 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 333

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+ +    P+  T+T L  G+CR+G  D+A ++ + M   GC P+   +++++DGL
Sbjct: 334 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 393

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           CKAG + +A   F KM   ++  +   +           +   +++  C AG I +AY+ 
Sbjct: 394 CKAGRVTEALGYFEKM--ARDEVVAPHV----------IAYSALIDGLCKAGKIDEAYEF 441

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++  +G +PD++T++ LING C  G I+  L+LF+ +  +G  PD VTY TL++ L R
Sbjct: 442 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCR 501

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             R ++AF +F QM  +G +P  +  ++++
Sbjct: 502 ASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 258/533 (48%), Gaps = 18/533 (3%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +I+GL KS K + AI +  +M  + I P+  TY  +I GL +  R  EAY LF + +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEA 292
           C P  V YN +++G CK  R++ AL L        GF P + +YS LIDGL R    D+ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
                +M      P+ V Y  ++  L   G+ K+A  LL  M   G  P+   +  +IKG
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 353 FCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            C  G ++ A  +  E++  +S   P+  TF  ++ G+C+   + DA  +F +  + GC 
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+V  ++ LIDGL K  ++++A  L  KM         + L    N V    +  T+V+ 
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKM---------VELGCRANTV----TYSTVVDG 287

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
               G +  A  +L Q+ ++G LPD +TYN+LI+GF K   +  A+ L +E+   G  P 
Sbjct: 288 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            VTY TL +GL R  R ++A  I   M   GC P+   Y S++   C+  + + A   + 
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407

Query: 591 QYLRD--ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
           +  RD  ++         I+   + G+++ A + L  M        +  ++I + GLC  
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           G++   L +F  + E   +    +   L+  LC+   +D A D+F     +G 
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGL 520



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 219/462 (47%), Gaps = 55/462 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  +  + +K  +   +M    C P+   YN ++N    +     A ++  +M
Sbjct: 103 TYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQM 162

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM------------------------- 194
               C P ++TF L+I GL K G+ E A +++DEM                         
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ 222

Query: 195 ------------TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                        +RG  PN  TY+ +I GL ++ + DEA +L  KM + GC  + V Y+
Sbjct: 223 RILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 282

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++G  K+ R+++A+ +LR     G +P   +Y+ LIDG F+ +R  EA    R+M E 
Sbjct: 283 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P VV Y  +  GL  +G+  +A+++L  M  RG  P+   Y++++ G C  G + +A
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402

Query: 363 RSLQVEIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
                E   RD +  P+   ++ LI G+C+ G +D+A +   +M +AG  P V  F+ LI
Sbjct: 403 LGY-FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILI 461

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           +GLC AG ++    LF  M E G  P              D  +  T+V++ C A  + +
Sbjct: 462 NGLCDAGRIDTGLELFRGMAERGCVP--------------DMVTYATLVDRLCRASRVDE 507

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
           A+ +  Q+   G  PD  T  ++I+G  +V     A ++  E
Sbjct: 508 AFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 179/359 (49%), Gaps = 3/359 (0%)

Query: 11  ILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVI 70
           ++D +  IE  L P    ++  +V   + K +        F  A +R    +  + S +I
Sbjct: 193 VVDEMFMIESGLSP--DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLI 250

Query: 71  SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
             L K    D   Q L ++        +  +  ++ G  KVG  E A+    +M++  C 
Sbjct: 251 DGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 310

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD   YN +++  F++Q    A+ +  EM++    P++VT++ L +GL +SG+ + A+++
Sbjct: 311 PDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEI 370

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFC 249
           LD M  RG  PN  TY+ ++ GLC+  R  EA   F KM +D   +P  +AY+AL++G C
Sbjct: 371 LDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLC 430

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  ++DEA   L    + G +P + ++S LI+GL  A R D     +R M E    PD+V
Sbjct: 431 KAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMV 490

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            Y  ++  L  A +V +A  L   MR  G+ PD      +I G  ++   + A+ +Q E
Sbjct: 491 TYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/490 (32%), Positives = 258/490 (52%), Gaps = 16/490 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L+S   K+G     + S  K  E     P++Y  + ++N     Q   LA +V  ++
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P IVTF+ LIN L K GK   A+++ D+M  RG  P+ +TYT +I+GLC+I   
Sbjct: 160 IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGET 219

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  KM+++GC P+ V Y+ +++   K RRV+EAL +    +  G  P + +Y+ L
Sbjct: 220 AAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSL 279

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    ++ EA A   +M    I PD+V + V++  + + GKV +A  +L  M E G+
Sbjct: 280 IQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGV 339

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y++L+ G+     + +AR L   +  +   P+  ++ ILI G C+   +D+A++
Sbjct: 340 EPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQ 399

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRV 458
           LFN+M   G  P+   +N LI GLC+ G L +A  LF  M    N P LF          
Sbjct: 400 LFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF---------- 449

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   +++ +C  G   KA+++   +  + + P+++ YN LI+  CK GN+  A KL
Sbjct: 450 ----TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKL 505

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F EL +KGL+P++  Y T+INGL +    ++A   F  M ++GC P    Y  ++     
Sbjct: 506 FSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLH 565

Query: 579 RRKFSLAFSL 588
            +  S A  L
Sbjct: 566 HKDESRAVQL 575



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 253/517 (48%), Gaps = 24/517 (4%)

Query: 23  EPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF--- 79
           +PL   +  T + S I+K       +   I   K+  L   + N   +S+L+  N F   
Sbjct: 92  KPLPCIIQFTKLLSAIVKMGQY---YDTVISLTKQMELAGLSPNIYTLSILI--NCFSHL 146

Query: 80  ---DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
              DL +  L ++    +      F  LI+   KVG   +A+E F  M    C+PDVY Y
Sbjct: 147 QRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTY 206

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             ++N   +      A  +  +M +  C PN+VT+S +I+   K  +   A+ +   M  
Sbjct: 207 TTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKV 266

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +GI P+ FTY  +I GLC  ++  EA  L  +M+     PD V +N L++  CK  +V E
Sbjct: 267 KGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSE 326

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  +L++  + G  P + +YS L+ G        EA   +  M  +  +PDV  Y ++I 
Sbjct: 327 AQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILIN 386

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  +  ++ +A +L ++M  +G+ P+   YN LI G C LG L +AR+L   +    +LP
Sbjct: 387 GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T++IL+ G C+ G    A +LF  M+     P++ M+N LID +CK+G L  A  LF
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +        LF++  Q   +++      T++   C  GL+ +A +    + E G  PD 
Sbjct: 507 SE--------LFVKGLQPNAQIY-----TTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           I+YN +I GF    + + A++L  E++ KG   D  T
Sbjct: 554 ISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 245/531 (46%), Gaps = 19/531 (3%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL-RRVDEALALLRSFEKDGFVPR 272
           C     D+A   F  M      P  + +  LL+   K+ +  D  ++L +  E  G  P 
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + + S LI+     +R D A++   K+ +  ++P +V +  +I  L + GK   AM+L  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           DM  RG  PD Y Y  +I G C +G    A  L  ++ +    PN  T++ +I    ++ 
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            V++A  +F+ M+  G  P +  +N+LI GLC   + ++A+ L  +M             
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM------------- 299

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           +  N + D  +   +V+  C  G + +A  +L  + E G  PD++TY+SL+ G+     +
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A KLF  +  KG +PD  +Y  LING  +V R ++A ++F +M   G TP+   Y +L
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKL 630
           +   C+      A +L+ + +       +    SI  + F ++G    A +    M    
Sbjct: 420 IHGLCQLGSLREARNLF-KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           +   L  Y I +  +C+ G +++A  +FS L              +I+GLCK G LD A+
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           + F    ++G        N ++R  L  KD  +  A  L+  M+  G+  D
Sbjct: 539 EAFRNMEEDGCPPDEISYNVIIRGFLHHKDESR--AVQLIGEMRDKGFIAD 587


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/488 (34%), Positives = 255/488 (52%), Gaps = 13/488 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   E  +    +M+      D+Y Y+  +N   R+    LALAV  +M+
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT S L+NG   S +   A+ ++D+M + G  P+ FT+T +I GL   N+A 
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD V Y  ++NG CK   +D AL+LL+  EK      +  Y+ +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL + K  D+A   + +M  + I PDV  Y  +I  L   G+  DA +LLSDM ER I 
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M    CFP+V  ++ LI G CKA  +E+       ME      LF  +SQ G  V +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 432

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++  +  A     A  +  Q+   G  P+I+TYN L++G CK G +  A+ +F+
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            LQ   + PD  TY  +I G+ +  + ED + +F  +   G +P+   Y ++++  CR+ 
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552

Query: 581 KFSLAFSL 588
               A SL
Sbjct: 553 SKEEADSL 560



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 263/525 (50%), Gaps = 15/525 (2%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            K +   S    + ++S + K N F+L     +++++  +S     + + I+ + +    
Sbjct: 75  VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL    KM +   +PD+   +++LN     +    A+A+  +MV++   P+  TF+ L
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL    K   A+ ++D+M QRG  P+  TY  V++GLC+    D A  L  KM+    
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D V YN +++G CK + +D+AL L    +  G  P + +YS LI  L    R+ +A  
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++LI GFC
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               LD+A+ +   +  +D  PN  T++ LI G C+   V++  +LF +M + G   +  
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +  LI G  +A + + A ++F +M  +G +P +               +   +++  C 
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL--------------TYNILLDGLCK 480

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + KA  +   L  S   PDI TYN +I G CK G +    +LF  L LKG+ P+ + 
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           Y T+I+G  R   +E+A  +  +M ++G  P+   Y +L+    R
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 162/595 (27%), Positives = 291/595 (48%), Gaps = 57/595 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV F+ L++ ++K  K E+ I + ++M   GI  + +TY+I I+
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  PD V  ++LLNG+C  +R+ +A+AL+    + G+ P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M +   +PD+V YG ++ GL + G +  A+ LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +  I  D   YN +I G C    +D A +L  E+  +   P+  T++ LI  +C  
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P+V  F+ALID   K G+L +A  L+ +M +   +P +F  
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-- 364

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++  +C    + +A  +   +      P+++TY++LI GFCK  
Sbjct: 365 ------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +   ++LF+E+  +GL  ++VTY TLI+G  +    ++A  +F QM   G  P+   Y 
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C+  K + A  ++                   E+LQ+  +E  I          
Sbjct: 473 ILLDGLCKNGKLAKAMVVF-------------------EYLQRSTMEPDIY--------- 504

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
                  Y I + G+C+ G+V++   +F  L   K +   P+ +    +I G C++G  +
Sbjct: 505 ------TYNIMIEGMCKAGKVEDGWELFCNL-SLKGV--SPNVIAYNTMISGFCRKGSKE 555

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +     ++G +      N L+R+ L  +D  +  +  L+  M+S G+  DA
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 608



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 192/372 (51%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL    L ++  G +     ++  +I G  K    + AL  F +M   
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +PDV+ Y+++++       +  A  +  +M++    PN+VTFS LI+   K GK   A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM +R I P+ FTY+ +I+G C  +R DEA  +F  M    C P+ V Y+ L+ G
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + L R   + G V    +Y+ LI G F+A+  D A   +++M    + P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL + GK+  AM +   ++   + PD Y YN +I+G C  G ++    L  
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN   +  +I G CR G  ++A  L  KM++ G  P+ G +N LI    + G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587

Query: 428 ELEKANLLFYKM 439
           + E +  L  +M
Sbjct: 588 DREASAELIKEM 599



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 230/534 (43%), Gaps = 51/534 (9%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L  I + D+A  LF  M  S   P  V +N LL+   K+ + +  ++L    +  G    
Sbjct: 58  LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L +YS  I+   R  +   A A   KM +   EPD+V    ++ G   + ++ DA+ L+ 
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M E G  PDT+ +  LI G        +A +L  ++ +R   P+  T+  ++ G+C+ G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
            +D A  L  KMEK      V ++N +IDGLCK   ++ A  LF +M+  G  P +F   
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF--- 294

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  +++   C  G    A ++L  + E    P+++T+++LI+ F K G 
Sbjct: 295 -----------TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A KL+ E+  + + PD  TY +LING    DR ++A  +F  M    C P+   Y +
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+ +                  R +E M+   E  Q+G V N +           
Sbjct: 404 LIKGFCKAK------------------RVEEGMELFREMSQRGLVGNTVT---------- 435

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + G  Q      A  +F  +V         +   L+ GLCK G L  AM 
Sbjct: 436 ------YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           VF Y  ++   + P +  Y +      K  K    + L C +   G   +   Y
Sbjct: 490 VFEYLQRS--TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 300/611 (49%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+  ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A++L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   ++++IDG CK   L+ A  +FY M   G +P L              
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GF  VG++N AL L +E
Sbjct: 397 -TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   GL PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I+   ++  ++ A Q    M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +T  + G C+ G+V + L +F  +     +    + + LI G  K G ++ A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 274/574 (47%), Gaps = 59/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +N +L+    +     AL ++++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+VTF+ L+NGL + G+   A+ +LD M + G+ P + TY  ++ G+C+     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++  CK  R  +A  L    ++ G  P L +Y+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+ +A    ++M E KI PDVV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  Y+++I GFC    LD A  +   +  +   PN  TF  LI G C    +DD  +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G    G+L  A  L  +M           +S G     
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM-----------ISSG--LCP 463

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V NAI        
Sbjct: 584 FTTLINGYCK------------------AGRVDDGLELFCEMGRRGIVANAIT------- 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 619 ---------YITLICGFRKVGNINGALDIFQEMI 643



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 255/512 (49%), Gaps = 27/512 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP    Y  +++   +K   + AL +  +M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            ++ + +PN+V +S +I+ L K G+   A  +  EM ++GI P+ FTY  +I G C   R
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A +L  +M +   SPD V YNAL+N F K  +  EA  L       G +P   +YS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   P+++ +  +I G   A ++ D M+LL +M E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V DT  YN LI GF  +G L+ A  L  E+      P+  T   L+ G+C NG + DA 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-----PHR 540

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++   +      P+++T+ +LING+C
Sbjct: 541 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  +++TY TLI G ++V     A  IF +M  +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
             ++++T  WS    K ++A    LQ   D+S
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKLQMSMDLS 684



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 230/503 (45%), Gaps = 95/503 (18%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF------------------ 127
           LD +    +      +  ++ G  K GD   AL    KM+E                   
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 128 ------DCQ------------PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                 D Q            PD++ YN+++        +  A  +  EM++    P++V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LIN   K GK   A ++ DEM  RGI+PN  TY+ +I G C+ NR D A  +F  M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GCSP+ + +N L++G+C  +R+D+ + LL    + G V    +Y+ LI G +     
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-----------RG 338
           + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++            G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+C+   +D+A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++F+ M      P+V  F  LI+G CKAG                             RV
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAG-----------------------------RV 597

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D       +E +C             ++   G + + ITY +LI GF KVGNINGAL +
Sbjct: 598 DDG------LELFC-------------EMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 519 FKELQLKGLRPDSVTYGTLINGL 541
           F+E+   G+ PD++T   ++ GL
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGL 661



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 11/369 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L E+    +S     +  LI+ + K G   +A E + +M      P+   Y+++++  
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A  ++Y M    C PN++TF+ LI+G   + + +  +++L EMT+ G++ + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I G   +   + A  L  +M  SG  PD V  + LL+G C   ++ +AL + + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 264 FEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI GL +  ++ +A ++   M  +   P+   +  LI G+C  G +D    L  E+ +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             + N  T+  LICG  + G ++ A  +F +M  +G +P       ++ GL    EL++A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 433 NLLFYKMEI 441
             +  K+++
Sbjct: 671 VAMLEKLQM 679



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 232/540 (42%), Gaps = 60/540 (11%)

Query: 214 CQINRADEAYRLFL---------KMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRS 263
           C  + A+ A RLF          K     C   F   +  L +GF +++ +++A+ L   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 69

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   +P +  +  L+  + R +R D   + Y+KM  ++I  D+  + ++I+      K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+     + + G+ PD   +N L+ G C    + +A +L  ++++    PN  TFT 
Sbjct: 130 LPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 189

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G + +A  L ++M + G  P+   +  ++DG+CK G+   A  L  KME   
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME--- 246

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                    +  + + +      +++  C  G    A  +  ++ E G  PD+ TYNS+I
Sbjct: 247 ---------EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G  + A +L +E+  + + PD VTY  LIN   +  +  +A  ++ +M   G  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y S++   C++ +   A  ++  YL                   KG   N I   
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF--YL----------------MATKGCSPNLIT-- 397

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         +   + G C   ++ + + +   + E   +    +   LIHG    
Sbjct: 398 --------------FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYDLDA 742
           G L+ A+D+    + +G       C+ LL  L    DN K+  A  +   M+    DLDA
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC---DNGKLKDALEMFKVMQKSKKDLDA 500



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 11/361 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +RK      + +A+I+  +K   F    +  DE+    +   +  +  +I G+ K    +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   F  M    C P++  +N +++     +     + + +EM +   + +  T++ LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--- 232
           +G    G    A+ +L EM   G+ P+  T   ++ GLC   +  +A  +F  M+ S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 233 --------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                   G  PD   YN L++G     +  EA  L       G VP   +YS +IDGL 
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA   +  M  +   P+VV +  +I G  +AG+V D ++L  +M  RGIV +  
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GF  +G ++ A  +  E+      P+T T   ++ G+     +  A  +  K+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677

Query: 405 E 405
           +
Sbjct: 678 Q 678


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 300/611 (49%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+  ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A++L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   ++++IDG CK   L+ A  +FY M   G +P L              
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GF  VG++N AL L +E
Sbjct: 397 -TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   GL PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I+   ++  ++ A Q    M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +T  + G C+ G+V + L +F  +     +    + + LI G  K G ++ A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 274/574 (47%), Gaps = 59/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +N +L+    +     AL ++++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+VTF+ L+NGL + G+   A+ +LD M + G+ P + TY  ++ G+C+     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++  CK  R  +A  L    ++ G  P L +Y+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+ +A    ++M E KI PDVV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  Y+++I GFC    LD A  +   +  +   PN  TF  LI G C    +DD  +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G    G+L  A  L  +M           +S G     
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM-----------ISSG--LCP 463

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V NAI        
Sbjct: 584 FTTLINGYCK------------------AGRVDDGLELFCEMGRRGIVANAIT------- 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 619 ---------YITLICGFRKVGNINGALDIFQEMI 643



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 255/512 (49%), Gaps = 27/512 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP    Y  +++   +K   + AL +  +M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            ++ + +PN+V +S +I+ L K G+   A  +  EM ++GI P+ FTY  +I G C   R
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A +L  +M +   SPD V YNAL+N F K  +  EA  L       G +P   +YS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   P+++ +  +I G   A ++ D M+LL +M E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V DT  YN LI GF  +G L+ A  L  E+      P+  T   L+ G+C NG + DA 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-----PHR 540

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++   +      P+++T+ +LING+C
Sbjct: 541 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  +++TY TLI G ++V     A  IF +M  +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
             ++++T  WS    K ++A    LQ   D+S
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKLQMSMDLS 684



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 230/503 (45%), Gaps = 95/503 (18%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF------------------ 127
           LD +    +      +  ++ G  K GD   AL    KM+E                   
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266

Query: 128 ------DCQ------------PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                 D Q            PD++ YN+++        +  A  +  EM++    P++V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LIN   K GK   A ++ DEM  RGI+PN  TY+ +I G C+ NR D A  +F  M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GCSP+ + +N L++G+C  +R+D+ + LL    + G V    +Y+ LI G +     
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-----------RG 338
           + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++            G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+C+   +D+A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++F+ M      P+V  F  LI+G CKAG                             RV
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAG-----------------------------RV 597

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D       +E +C             ++   G + + ITY +LI GF KVGNINGAL +
Sbjct: 598 DDG------LELFC-------------EMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 519 FKELQLKGLRPDSVTYGTLINGL 541
           F+E+   G+ PD++T   ++ GL
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGL 661



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 11/369 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L E+    +S     +  LI+ + K G   +A E + +M      P+   Y+++++  
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A  ++Y M    C PN++TF+ LI+G   + + +  +++L EMT+ G++ + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I G   +   + A  L  +M  SG  PD V  + LL+G C   ++ +AL + + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 264 FEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI GL +  ++ +A ++   M  +   P+   +  LI G+C  G +D    L  E+ +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             + N  T+  LICG  + G ++ A  +F +M  +G +P       ++ GL    EL++A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 433 NLLFYKMEI 441
             +  K+++
Sbjct: 671 VAMLEKLQM 679



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 232/540 (42%), Gaps = 60/540 (11%)

Query: 214 CQINRADEAYRLFL---------KMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRS 263
           C  + A+ A RLF          K     C   F   +  L +GF +++ +++A+ L   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 69

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   +P +  +  L+  + R +R D   + Y+KM  ++I  D+  + ++I+      K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+     + + G+ PD   +N L+ G C    + +A +L  ++++    PN  TFT 
Sbjct: 130 LPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 189

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G + +A  L ++M + G  P+   +  ++DG+CK G+   A  L  KME   
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME--- 246

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                    +  + + +      +++  C  G    A  +  ++ E G  PD+ TYNS+I
Sbjct: 247 ---------EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G  + A +L +E+  + + PD VTY  LIN   +  +  +A  ++ +M   G  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y S++   C++ +   A  ++  YL                   KG   N I   
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF--YL----------------MATKGCSPNLIT-- 397

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         +   + G C   ++ + + +   + E   +    +   LIHG    
Sbjct: 398 --------------FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYDLDA 742
           G L+ A+D+    + +G       C+ LL  L    DN K+  A  +   M+    DLDA
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC---DNGKLKDALEMFKVMQKSKKDLDA 500



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 11/361 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +RK      + +A+I+  +K   F    +  DE+    +   +  +  +I G+ K    +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   F  M    C P++  +N +++     +     + + +EM +   + +  T++ LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--- 232
           +G    G    A+ +L EM   G+ P+  T   ++ GLC   +  +A  +F  M+ S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 233 --------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                   G  PD   YN L++G     +  EA  L       G VP   +YS +IDGL 
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA   +  M  +   P+VV +  +I G  +AG+V D ++L  +M  RGIV +  
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GF  +G ++ A  +  E+      P+T T   ++ G+     +  A  +  K+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677

Query: 405 E 405
           +
Sbjct: 678 Q 678


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 300/611 (49%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+T ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A++L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   ++++IDG CK   L+ A  +FY M   G +P L              
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GF  VG++N AL L +E
Sbjct: 397 -TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   GL PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I+   ++  ++ A Q    M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +T  + G C+ G+V + L +F  +     +    + + LI G  K G ++ A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 272/574 (47%), Gaps = 59/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +  +L+    +     AL  +++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+VTF+ L+NGL + G+   A+ +LD M + G+ P + TY  ++ G+C+     
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++  CK  R  +A  L    ++ G  P L +Y+ +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+ +A    ++M E KI PDVV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  Y+++I GFC    LD A  +   +  +   PN  TF  LI G C    +DD  +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G    G+L  A  L  +M           +S G     
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM-----------ISSG--LCP 463

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V NAI        
Sbjct: 584 FTTLINGYCK------------------AGRVDDGLELFCEMGRRGIVANAIT------- 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 619 ---------YITLICGFRKVGNINGALDIFQEMI 643



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 261/534 (48%), Gaps = 31/534 (5%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             D + Q  +     NV      F  L++G  + G   +A+    +M E   QP    Y 
Sbjct: 168 ALDFFHQMFETTCRPNVVT----FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
            +++   +K   + AL +  +M ++ + +PN+V +S +I+ L K G+   A  +  EM +
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +GI P+ FTY  +I G C   R  +A +L  +M +   SPD V YNAL+N F K  +  E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L       G +P   +YS +IDG  +  R D A   +  M  +   P+++ +  +I 
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G   A ++ D M+LL +M E G+V DT  YN LI GF  +G L+ A  L  E+      P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKA-----------GCFPSVGMFNALIDGLCK 425
           +  T   L+ G+C NG + DA ++F  M+K+           G  P V  +N LI GL  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G+  +A  L+ +M     P   +        V D  +  +M++  C    + +A ++  
Sbjct: 524 EGKFLEAEELYEEM-----PHRGI--------VPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +      P+++T+ +LING+CK G ++  L+LF E+  +G+  +++TY TLI G ++V 
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
               A  IF +M  +G  P     ++++T  WS    K ++A    LQ   D+S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDLS 684



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 229/540 (42%), Gaps = 60/540 (11%)

Query: 214 CQINRADEAYRLFL---------KMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRS 263
           C  + A+ A RLF          K     C   F   +  L +GF +++ +++A+ L   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 69

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   +P +  +  L+  + R +R D   + Y+KM  ++I  D+  + ++I+      K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSK 129

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+     + + G+ PD   +  L+ G C    + +A     ++++    PN  TFT 
Sbjct: 130 LPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT 189

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G + +A  L ++M + G  P+   +  ++DG+CK G+   A  L  KME   
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME--- 246

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                    +  + + +      +++  C  G    A  +  ++ E G  PD+ TYNS+I
Sbjct: 247 ---------EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G  + A +L +E+  + + PD VTY  LIN   +  +  +A  ++ +M   G  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y S++   C++ +   A  ++  YL                   KG   N I   
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF--YL----------------MATKGCSPNLIT-- 397

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         +   + G C   ++ + + +   + E   +    +   LIHG    
Sbjct: 398 --------------FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYDLDA 742
           G L+ A+D+    + +G       C+ LL  L    DN K+  A  +   M+    DLDA
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC---DNGKLKDALEMFKVMQKSKKDLDA 500



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 11/361 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +RK      + +A+I+  +K   F    +  DE+    +   +  +  +I G+ K    +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   F  M    C P++  +N +++     +     + + +EM +   + +  T++ LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--- 232
           +G    G    A+ +L EM   G+ P+  T   ++ GLC   +  +A  +F  M+ S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 233 --------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                   G  PD   YN L++G     +  EA  L       G VP   +YS +IDGL 
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA   +  M  +   P+VV +  +I G  +AG+V D ++L  +M  RGIV +  
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GF  +G ++ A  +  E+      P+T T   ++ G+     +  A  +  K+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677

Query: 405 E 405
           +
Sbjct: 678 Q 678


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 188/676 (27%), Positives = 322/676 (47%), Gaps = 67/676 (9%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L K +  D   + L E+    V+  +  F  ++ G  K G  E+A      M E +
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P    YN +++   ++Q    A  +  E V    +P++VT+S+L +GL K G+ + A 
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +++ EM+  G  PN  TY  +I GLC+ ++ ++AY L   +  SG  PD V Y  +++G 
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL 195

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  R+D+AL ++    K G  P + +Y+ L++GL R  R DEA+  +++M  +    D 
Sbjct: 196 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 255

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  ++ G  ++ + K+A K++  +R     P    YNAL+ G+C  G LD+  ++  +
Sbjct: 256 LAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFED 312

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  R  +PN  T+ I++ G+C++G VD+A      M  AGC P V  +N +IDGL KA +
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            ++A                                                 ++L Q+ 
Sbjct: 373 PKEAR------------------------------------------------QVLDQMI 384

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           ++G  PD +TYN+L+  FCK    + A+ + K +   G+ PD+VTY TLI+GL + +R  
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG 444

Query: 549 DAFRIFGQMPQNGCTPSP-AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
           DA+ +  +M +NGC  S    Y +++   C+      A  L    +  ++G   E+    
Sbjct: 445 DAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL----MDHMTGHGVEANTVT 500

Query: 607 ----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
               I+   ++G ++ A   L EMD   ++     YT  +IGLC+  Q+  A  +   +V
Sbjct: 501 YNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASKLAREMV 557

Query: 663 ECKAI-VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
             K + +T  +   LI    K   LD A+ +    ++ G    P V  Y +      K +
Sbjct: 558 AVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG--CSPSVITYNMVITCLCKLD 615

Query: 722 KKVHAYHLLCRMKSVG 737
           K   A+ L   M   G
Sbjct: 616 KVDKAWELFDEMAVRG 631



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 307/666 (46%), Gaps = 88/666 (13%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVG 112
           A+R    S  + + +IS L K    D     +DE  S     V DV  + +L  G  K G
Sbjct: 72  AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGF--VPDVVTYSILADGLCKRG 129

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             ++A E   +M    C P++  YN +++   +      A  +   +V    +P++VT++
Sbjct: 130 RIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYT 189

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           ++++GL K G+ + A+KM++ M +RG  P+  TYT ++ GLC+  R DEA+ +F +M   
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEAL----------------ALLRSFEKD--------- 267
            C+ D +AY +L+NG+CK  R  EA                 AL+  + K+         
Sbjct: 250 DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNV 309

Query: 268 -------GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                  G VP + +Y+ ++DGL +  + DEA+ +   M      PDVV Y ++I GL +
Sbjct: 310 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 369

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           A K K+A ++L  M + GI PD   YN L+  FC     D A  +   + K    P+  T
Sbjct: 370 ASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 429

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV-GMFNALIDGLCKAGELEKANLLFYKM 439
           +  LI G+ +   + DA +L ++M + GC  S    +N +ID LCK G L++A LL   M
Sbjct: 430 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 489

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                         G     +  +    +++ C  G + +A  +   L+E   L D ++Y
Sbjct: 490 -------------TGHGVEANTVTYNIFIDRLCKEGRLDEASSL---LSEMDTLRDEVSY 533

Query: 500 NSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            ++I G CK   ++ A KL +E+  +KGL   S T+  LI+   +  R ++A  +   M 
Sbjct: 534 TTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMV 593

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           Q GC+PS   Y  ++T  C+  K   A+ L+                  +E   +G V +
Sbjct: 594 QRGCSPSVITYNMVITCLCKLDKVDKAWELF------------------DEMAVRGIVAS 635

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           ++                 YT+ + GLC  G+ KEAL +   +      +    C KL  
Sbjct: 636 SVS----------------YTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYL 679

Query: 679 GLCKRG 684
            L  +G
Sbjct: 680 ALRGQG 685



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 5/273 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           + +IS L + N     ++ + E LR+G V      +  +I    K G  ++AL     M 
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               + +   YN  ++   ++     A ++  EM   + L + V+++ +I GL K+ + +
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLD 547

Query: 186 VAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            A K+  EM   +G+     T+ ++I    +  R DEA  L   M   GCSP  + YN +
Sbjct: 548 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMV 607

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +   CKL +VD+A  L       G V    SY+ LI GL    R  EA     +M     
Sbjct: 608 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 667

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           E D +    +   L   G+ ++A +LL  M  +
Sbjct: 668 EIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 300/611 (49%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+  ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A++L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   ++++IDG CK   L+ A  +FY M   G +P L              
Sbjct: 350 EMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLI------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++ E+G + D  TYN+LI+GF  VG++N AL L +E
Sbjct: 397 -TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   GL PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L++      KF  A  L+ +   R I          I+   ++  ++ A Q    M  K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +T  + G C+ G+V + L +F  +     +    + + LI G  K G ++ A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/574 (28%), Positives = 275/574 (47%), Gaps = 59/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +N +L+    +     AL ++++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+VTF+ L+NGL + G+   A+ +LD M + G+ P + TY  ++ G+C+I    
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++  CK  R  +A  L    ++ G  P L +Y+ +
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+ +A    ++M E KI PDVV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  Y+++I GFC    LD A  +   +  +   PN  TF  LI G C    +DD  +
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G       +N LI G    G+L  A  L  +M           +S G     
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM-----------ISSG--LCP 463

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD+ TYN LI+G   
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V NAI        
Sbjct: 584 FTTLINGYCK------------------AGRVDDGLELFCEMGRRGIVANAIT------- 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 619 ---------YITLICGFRKVGNINGALDIFQEMI 643



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 254/512 (49%), Gaps = 27/512 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP    Y  +++   +    + AL +  +M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            ++ + +PN+V +S +I+ L K G+   A  +  EM ++GI P+ FTY  +I G C   R
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A +L  +M +   SPD V YNAL+N F K  +  EA  L       G +P   +YS 
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   P+++ +  +I G   A ++ D M+LL +M E G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V DT  YN LI GF  +G L+ A  L  E+      P+  T   L+ G+C NG + DA 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM-----PHR 540

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++   +      P+++T+ +LING+C
Sbjct: 541 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  +++TY TLI G ++V     A  IF +M  +G  P   
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQYLRDIS 597
             ++++T  WS    K ++A    LQ   D+S
Sbjct: 653 TIRNMLTGLWSKEELKRAVAMLEKLQMSMDLS 684



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 232/503 (46%), Gaps = 95/503 (18%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF------------------ 127
           LD +    +      +  ++ G  K+GD   AL+   KM+E                   
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC 266

Query: 128 ------DCQ------------PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                 D Q            PD++ YN+++        +  A  +  EM++    P++V
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LIN   K GK   A ++ DEM  RGI+PN  TY+ +I G C+ NR D A  +F  M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GCSP+ + +N L++G+C  +R+D+ + LL    + G V    +Y+ LI G +     
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDL 446

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-----------RG 338
           + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++            G
Sbjct: 447 NAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNG 506

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+C+   +D+A 
Sbjct: 507 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 566

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++F+ M      P+V  F  LI+G CKAG                             RV
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAG-----------------------------RV 597

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D       +E +C             ++   G + + ITY +LI GF KVGNINGAL +
Sbjct: 598 DDG------LELFC-------------EMGRRGIVANAITYITLICGFRKVGNINGALDI 638

Query: 519 FKELQLKGLRPDSVTYGTLINGL 541
           F+E+   G+ PD++T   ++ GL
Sbjct: 639 FQEMISSGVYPDTITIRNMLTGL 661



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 179/369 (48%), Gaps = 11/369 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L E+    +S     +  LI+ + K G   +A E + +M      P+   Y+++++  
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A  ++Y M    C PN++TF+ LI+G   + + +  +++L EMT+ G++ + 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I G   +   + A  L  +M  SG  PD V  + LL+G C   ++ +AL + + 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 264 FEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y 
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI GL +  ++ +A ++   M  +   P+   +  LI G+C  G +D    L  E+ +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             + N  T+  LICG  + G ++ A  +F +M  +G +P       ++ GL    EL++A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670

Query: 433 NLLFYKMEI 441
             +  K+++
Sbjct: 671 VAMLEKLQM 679



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/540 (23%), Positives = 232/540 (42%), Gaps = 60/540 (11%)

Query: 214 CQINRADEAYRLFL---------KMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRS 263
           C  + A+ A RLF          K     C   F   +  L +GF +++ +++A+ L   
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 69

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   +P +  +  L+  + R +R D   + Y+KM  ++I  D+  + ++I+      K
Sbjct: 70  MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 129

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+     + + G+ PD   +N L+ G C    + +A +L  ++++    PN  TFT 
Sbjct: 130 LPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 189

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G + +A  L ++M + G  P+   +  ++DG+CK G+   A  L  KME   
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKME--- 246

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                    +  + + +      +++  C  G    A  +  ++ E G  PD+ TYNS+I
Sbjct: 247 ---------EISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G  + A +L +E+  + + PD VTY  LIN   +  +  +A  ++ +M   G  
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y S++   C++ +   A  ++  YL                   KG   N I   
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMF--YL----------------MATKGCSPNLIT-- 397

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         +   + G C   ++ + + +   + E   +    +   LIHG    
Sbjct: 398 --------------FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYDLDA 742
           G L+ A+D+    + +G       C+ LL  L    DN K+  A  +   M+    DLDA
Sbjct: 444 GDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC---DNGKLKDALEMFKVMQKSKKDLDA 500



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 161/361 (44%), Gaps = 11/361 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +RK      + +A+I+  +K   F    +  DE+    +   +  +  +I G+ K    +
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   F  M    C P++  +N +++     +     + + +EM +   + +  T++ LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--- 232
           +G    G    A+ +L EM   G+ P+  T   ++ GLC   +  +A  +F  M+ S   
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 233 --------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                   G  PD   YN L++G     +  EA  L       G VP   +YS +IDGL 
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA   +  M  +   P+VV +  +I G  +AG+V D ++L  +M  RGIV +  
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAI 617

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GF  +G ++ A  +  E+      P+T T   ++ G+     +  A  +  K+
Sbjct: 618 TYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677

Query: 405 E 405
           +
Sbjct: 678 Q 678


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/484 (33%), Positives = 247/484 (51%), Gaps = 27/484 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  KV   E+AL   GKM      PDVY Y AV++    +     A     EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              N  PN+VT+++LI+GL K G+ + A+ +L +M ++ + P   TY  +ISGLC+  RA
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EAY L  +M  SGC PD   Y  L+ GFCK ++ D+AL +       GF P + +YSCL
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 280 IDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           IDGL +  R  EA   + +M +     P+ V Y  +I G    GK+ +AM LL  M E G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y  L+ GFC L  LD A  L  ++ ++   P+  TFT L+ G+CR   + DA 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNR 457
            +  +M +  C P+V  +N ++DG C+A +LE+A   +  +M+   N   F  + +G  +
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCK 371

Query: 458 VHDKASLQTMVEQ-------------------YCTAGLIHKAYKILMQ-LAESGNLPDII 497
           V+  +    +VE+                    C    + +A ++  + L E G LP+ I
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY++LI G C  G ++ A    +    KG  P+  TY  LI+  ++ +R+EDA  +   M
Sbjct: 432 TYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 558 PQNG 561
            Q G
Sbjct: 488 VQRG 491



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 263/503 (52%), Gaps = 35/503 (6%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C  D   Y +++    + +    AL    +MV     P++ T++ +I+ L    +   A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K L+EM  R + PN  TYT++I GLC+  R DEA  L  KM+   C P  V YN+L++G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  R  EA  LL      G +P + +Y+ LI G  ++K+ D+A   + ++      PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V Y  +I GL + G++K+A+ L   M + G  +P+T  YN+LI GFC +G +D+A +L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + +  S P+  T+T L+ G C+   +DDA  L N+M + G  P V  F +L+DGLC+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 428 ELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            L  A  +  +M     +PT++              +  T+++ YC A  + +A K +++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVY--------------TYNTILDGYCRANQLEEARKFMLE 351

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
             E    P+++++N +I G CKV   + A++L +E + +   PD V Y T+I+GL R  +
Sbjct: 352 --EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409

Query: 547 EEDAFRIFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLA--------------FSLWLQ 591
            ++A R++ +M  + GC P+   Y +L+T  C       A              ++L + 
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLID 469

Query: 592 YLRDISGRDDESMKSIEEFLQKG 614
             R  + RD+++ + +++ +Q+G
Sbjct: 470 AFRK-ANRDEDARELLDDMVQRG 491



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 164/533 (30%), Positives = 269/533 (50%), Gaps = 71/533 (13%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           + CS DFV Y +L+ G CK++R+++AL  L      GF P + +Y+ +I  L    R  E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A  +  +M    + P+VV Y V+I GL + G+V +A+ LLS MR++  VP    YN+LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C      +A  L  E+     +P+  T+T LI G C++   DDA ++F ++   G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            V  ++ LIDGLCK G L++A              LF R+ + G+ + +  +  +++  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEA------------IDLFGRMIKSGSCMPNTVTYNSLISGF 231

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A  +L ++AE+G+ PD++TY +L+NGFCK+  ++ A  L  ++  KGL PD 
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR------RRKFSL- 584
           VT+ +L++GL R +R  DA  I G+M +  C+P+   Y +++   CR       RKF L 
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351

Query: 585 ---------AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
                    +F++ ++ L  ++ R  E+M+ +EE  ++    + +               
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVN-RSSEAMELVEEARRRRCNPDVVM-------------- 396

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-------KLIHGLCKRGYLDL 688
             YT  + GLC++ +V EA  ++  ++E       P C+        LI GLC  G LD 
Sbjct: 397 --YTTVIDGLCREKKVDEACRVYRKMLE------EPGCLPNSITYSTLITGLCNAGMLDR 448

Query: 689 AMDVFLYTLKNGFILR---PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           A          G+I +   P +  Y L    F K N+   A  LL  M   G+
Sbjct: 449 A---------RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 40/250 (16%)

Query: 58  KRLRSFASNSAVISMLLKPNGF------DLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           +R+    S+  V++     NGF      D  +  L+++    ++     F  L+ G  + 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
                A+   G+M+   C P VY YN +L+   R     L  A  + + +++C PN+V+F
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ--LEEARKFMLEEMDCPPNVVSF 362

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           +++I GL K  ++  A+++++E  +R   P+   YT VI GLC+  + DEA R++ KM +
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 232 S--------------------------------GCSPDFVAYNALLNGFCKLRRVDEALA 259
                                            GC P+   YN L++ F K  R ++A  
Sbjct: 423 EPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 260 LLRSFEKDGF 269
           LL    + GF
Sbjct: 483 LLDDMVQRGF 492


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/484 (33%), Positives = 247/484 (51%), Gaps = 27/484 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  KV   E+AL   GKM      PDVY Y AV++    +     A     EM
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              N  PN+VT+++LI+GL K G+ + A+ +L +M ++ + P   TY  +ISGLC+  RA
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EAY L  +M  SGC PD   Y  L+ GFCK ++ D+AL +       GF P + +YSCL
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191

Query: 280 IDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           IDGL +  R  EA   + +M +     P+ V Y  +I G    GK+ +AM LL  M E G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y  L+ GFC L  LD A  L  ++ ++   P+  TFT L+ G+CR   + DA 
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNR 457
            +  +M +  C P+V  +N ++DG C+A +LE+A   +  +M+   N   F  + +G  +
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCK 371

Query: 458 VHDKASLQTMVEQ-------------------YCTAGLIHKAYKILMQ-LAESGNLPDII 497
           V+  +    +VE+                    C    + +A ++  + L E G LP+ I
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY++L+ G C  G ++ A    +    KG  P+  TY  LI+  ++ +R+EDA  +   M
Sbjct: 432 TYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 558 PQNG 561
            Q G
Sbjct: 488 VQRG 491



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 263/503 (52%), Gaps = 35/503 (6%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C  D   Y +++    + +    AL    +MV     P++ T++ +I+ L    +   A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K L+EM  R + PN  TYT++I GLC+  R DEA  L  KM+   C P  V YN+L++G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  R  EA  LL      G +P + +Y+ LI G  ++K+ D+A   + ++      PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V Y  +I GL + G++K+A+ L   M + G  +P+T  YN+LI GFC +G +D+A +L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + +  S P+  T+T L+ G C+   +DDA  L N+M + G  P V  F +L+DGLC+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 428 ELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            L  A  +  +M     +PT++              +  T+++ YC A  + +A K +++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVY--------------TYNTILDGYCRANQLEEARKFMLE 351

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
             E    P+++++N +I G CKV   + A++L +E + +   PD V Y T+I+GL R  +
Sbjct: 352 --EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409

Query: 547 EEDAFRIFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLA--------------FSLWLQ 591
            ++A R++ +M  + GC P+   Y +L+T  C       A              ++L + 
Sbjct: 410 VDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLID 469

Query: 592 YLRDISGRDDESMKSIEEFLQKG 614
             R  + RD+++ + +++ +Q+G
Sbjct: 470 AFRK-ANRDEDARELLDDMVQRG 491



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/533 (30%), Positives = 269/533 (50%), Gaps = 71/533 (13%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           + CS DFV Y +L+ G CK++R+++AL  L      GF P + +Y+ +I  L    R  E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A  +  +M    + P+VV Y V+I GL + G+V +A+ LLS MR++  VP    YN+LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C      +A  L  E+     +P+  T+T LI G C++   DDA ++F ++   G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            V  ++ LIDGLCK G L++A              LF R+ + G+ + +  +  +++  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEA------------IDLFGRMIKSGSCMPNTVTYNSLISGF 231

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A  +L ++AE+G+ PD++TY +L+NGFCK+  ++ A  L  ++  KGL PD 
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR------RRKFSL- 584
           VT+ +L++GL R +R  DA  I G+M +  C+P+   Y +++   CR       RKF L 
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351

Query: 585 ---------AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
                    +F++ ++ L  ++ R  E+M+ +EE  ++    + +               
Sbjct: 352 EMDCPPNVVSFNIMIRGLCKVN-RSSEAMELVEEARRRRCNPDVVM-------------- 396

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-------KLIHGLCKRGYLDL 688
             YT  + GLC++ +V EA  ++  ++E       P C+        L+ GLC  G LD 
Sbjct: 397 --YTTVIDGLCREKKVDEACRVYRKMLE------EPGCLPNSITYSTLVTGLCNAGMLDR 448

Query: 689 AMDVFLYTLKNGFILR---PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           A          G+I +   P +  Y L    F K N+   A  LL  M   G+
Sbjct: 449 A---------RGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 261/501 (52%), Gaps = 20/501 (3%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           F++ T++   + K K  +    F      +       + +AVI  L   N      + L+
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+ + N++     + VLI G  K G  ++A+    KM++  C P    YN++++   + +
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAE 129

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  EMV   C+P+I T++ LI G  KS K++ A+++ +++  RG  P+  TY+
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189

Query: 208 IVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            +I GLC+  R  EA  LF +M  SG C P+ V YN+L++GFC++ ++DEA+ LL    +
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +Y+ L++G  +  R D+AY    +M  + + PDVV +  ++ GL    ++ D
Sbjct: 250 TGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSD 309

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+ +L +MR +   P  Y YN ++ G+C    L++AR   +E  + D  PN  +F I+I 
Sbjct: 310 AVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMIR 367

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G+C+     +A +L  +  +  C P V M+  +IDGLC+  ++++A  ++ KM       
Sbjct: 368 GLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM------- 420

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
               L + G  + +  +  T+V   C AG++ +A   +    E G +P+I TYN LI+ F
Sbjct: 421 ----LEEPGC-LPNSITYSTLVTGLCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAF 471

Query: 507 CKVGNINGALKLFKELQLKGL 527
            K      A +L  ++  +G 
Sbjct: 472 RKANRDEDARELLDDMVQRGF 492


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 253/484 (52%), Gaps = 47/484 (9%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M++  C+P+V  YN++++   +      A  ++  M  + C P++VT++ L++GL ++GK
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 184 TEVAIKMLDEMTQR--------GIL-------------------------PNKFTYTIVI 210
            E A+ +  EM  R         IL                         PN  TY+++I
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            GLC+ NR  +A  L   MK  GCSPD + Y  L++G CK  +V  A  +LR     G V
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P L +Y+ L+ GL RA+R  +A A  R M      P+VV YG +I GL + G+VKDA  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L+DM ++G  PD   YN LI G C    +D++ +L          P+  T++ +I G+CR
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           +  +D+A +L   ++  GC P V +++ LIDGLCKAG++++A  L+  M           
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM----------- 349

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
              G     D  +  T+++  C AG + +A+ +L ++   G  P  +TYNSLI G C + 
Sbjct: 350 --TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 407

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR-EEDAFRIFGQMPQNGCTPSPAVY 569
           +++ A++L +E++     P +VTY  LI+G+ R++R +  A   F +M  NG  P    Y
Sbjct: 408 HLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITY 467

Query: 570 KSLM 573
             L+
Sbjct: 468 SILL 471



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 262/494 (53%), Gaps = 50/494 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--- 160
           LI G  K  + ++A E F  MK  +C P +  YN +L+  FR      A+A++ EM+   
Sbjct: 16  LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 75

Query: 161 ----------------------------KLN--CLPNIVTFSLLINGLSKSGKTEVAIKM 190
                                       K++  C PN++T+S+LI+GL K+ +   A+++
Sbjct: 76  SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVEL 135

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L+ M  RG  P+  TYTI++ GLC+ ++   A+ +  +M D+GC P+ V YN+LL+G C+
Sbjct: 136 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 195

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            RRV +ALAL+R     G  P + +Y  LIDGL +  R  +A A    M ++   PD+++
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y ++I GL +A +V +++ LL      GI PD   Y+++I G C    LD+A  L + + 
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            R   P+   ++ LI G+C+ G VD+A  L+  M   GC   V  ++ LIDGLCKAG ++
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVD 375

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A+LL  +M  +G  P+                +  ++++  C    + +A +++ ++  
Sbjct: 376 EAHLLLARMVRMGTPPSTM--------------TYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 490 SGNLPDIITYNSLINGFCKVGNIN-GALKLFKELQLKGLRPDSVTYGTLINGLQRV-DRE 547
           S   P  +TYN LI+G C++  ++  AL  F+E+   G+ PD +TY  L+ GL++  D  
Sbjct: 422 SNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 481

Query: 548 EDAFRIFGQMPQNG 561
           E    +  QM Q G
Sbjct: 482 ELRHLVLDQMVQLG 495



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 226/469 (48%), Gaps = 57/469 (12%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+D GC P+ V YN+L++G CK    D A  L    +     P + +Y+ L+DGLFR  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A A +++M + +   DV+ + +++ GL  AGK++ A++    M +R   P+   Y+ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G C    + QA  L   +  R   P+  T+TIL+ G+C+   V  A ++  +M  AG
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTM 467
           C P++  +N+L+ GLC+A  +  A  L   M   G  P +               +  T+
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVV--------------TYGTL 224

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C  G +  A  +L  + + G  PD++ YN LING CK   ++ ++ L +     G+
Sbjct: 225 IDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +PD VTY ++I GL R +R ++A R+   +   GC P   +Y +L+   C+  K   AF 
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 344

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L+                         EV         M     D  +  Y+  + GLC+
Sbjct: 345 LY-------------------------EV---------MTGDGCDADVVTYSTLIDGLCK 370

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVF 693
            G+V EA  + + +V    + TPPS +    LI GLC   +LD A+++ 
Sbjct: 371 AGRVDEAHLLLARMVR---MGTPPSTMTYNSLIKGLCDLNHLDEAIELV 416


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 189/656 (28%), Positives = 314/656 (47%), Gaps = 39/656 (5%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPN 77
            P+L  LLP L+ + V+S+     +PQ    FF W A R   + +  S S+++++L    
Sbjct: 56  HPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNIL---- 111

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK---EFDCQPDVY 134
                      +R+  + V   +   +I     + D    LE F KM    EF  +P + 
Sbjct: 112 -----------IRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLR 160

Query: 135 IYNAVLNIAFRKQLFLLAL-AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
            YN +L ++  K L +  +  VY E++     PNI TF+ ++NG  K G    A     +
Sbjct: 161 CYNTIL-MSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASK 219

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           + Q G+ P+ FTYT +I G C+    D AY +FL M   GC  + V+Y  L++G C+  R
Sbjct: 220 IVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGR 279

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           ++EAL L     +D   P + +Y+ LI  L  + R  EA   + +M E+  EP+V  Y V
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL +  K+ +A K+LS+M E+G++P    YNALI G+C  G++D A  +   +    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PNT T+  LICG+C+   V  A  L NKM +    PS+  +N+LI G CK  +LE A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA- 458

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
              Y++         L L      V D+ +    ++  C  G + +A  +   +   G  
Sbjct: 459 ---YRL---------LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            + + Y +LI+G+CKVG I+ A  L + +      P+S TY  LI GL +  + ++A  +
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFL 611
             +M   G  P+   Y  L+    +   F  A  ++  ++  +  + D    +  +  + 
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF-NHMVSLGYQPDVCTYTAFLHAYF 625

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CK 665
            +G +E     + +M+ +     L  YT+ + G  + G    A +    +V+  CK
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 302/634 (47%), Gaps = 59/634 (9%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ +    + A E F  M +  CQ +   Y  +++          AL ++ +M + N
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P + T+++LI  LS SG+   A+ + +EM ++G  PN  TYT++I GLC+ N+ DEA 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++  +M + G  P  V YNAL++G+CK   +D+A  +L   E +   P   +Y+ LI GL
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + ++  +A A   KM E K+ P ++ Y  +I G  +   ++ A +LLS M E G+VPD 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + Y+  I   C  G +++A +L   +  +    N   +T LI G C+ G +D A  L  +
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M    C P+   +N LI+GLCK  ++++A+ L  KM  +G  PT+       G  + D A
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 463 ---------------------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                                +    +  Y + G++ +   ++ ++ E G LPD++TY  
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED------------ 549
           LI+G+ ++G  + A    K +   G +P       LI  L   +R ++            
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 550 ------AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL--RDISGRDD 601
                 A ++F +M ++GCT   ++Y +L+   C++ +   A  L + ++  R +S  +D
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL-VHHMKERGMSPSED 773

Query: 602 ESMKSIEEFLQKGEVENAIQ--------GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                ++   + G    A++        GLL +        L  Y + + GL  +G  ++
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL--------LESYKLLVCGLYIEGSNEK 825

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           A  +F  L+ C       +   LI GL KR  +D
Sbjct: 826 AKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 859



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 247/553 (44%), Gaps = 75/553 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K N  D   + L E+    +      +  LI GY K G  + A E    M+ 
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   YN ++    +K+    A+A+  +M++    P+++T++ LI+G  K    E 
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L  M + G++P+++TY++ I  LC+  R +EA  LF  +K  G   + V Y AL++
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CK+ ++D A +LL     D  +P   +Y+ LI+GL + K+  EA +   KM    ++P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            VV Y ++I  + + G    A+K+ + M   G  PD   Y A +  +   G+L++   + 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNG-----------MVDD------------------- 396
            ++ +   LP+  T+T+LI G  R G           MVD                    
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697

Query: 397 -----------------------AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
                                  A KLF KM + GC   V ++ ALI G C+   LE+A 
Sbjct: 698 NRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757

Query: 434 LLFYKM-EIGKNPT--LFLRLSQGGNRVHDKASLQTMVEQYCTAGLI------------- 477
            L + M E G +P+  ++  L     ++   A    +V+     GL+             
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817

Query: 478 ------HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
                  KA  +   L   G   D + +  LI+G  K   ++   +L   ++ KG +P+ 
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNP 877

Query: 532 VTYGTLINGLQRV 544
           +TY  LI GL+R 
Sbjct: 878 LTYSLLIEGLERT 890



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 231/541 (42%), Gaps = 54/541 (9%)

Query: 209 VISGLCQINRADEAYRLFLKMKDSG---CSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +I   C I        +F KM   G     P    YN +L    K   +DE   +     
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +   P + +++ +++G  +     EA  +  K+ +  + PD   Y  +I G      V 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A ++   M ++G   +   Y  LI G C+ G +++A  L  ++ + +  P   T+T+LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
             +  +G   +A  LFN+M++ GC P+V  +  LIDGLCK  ++++A  +  +M E G  
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P++               +   +++ YC  G+I  A++IL  +  +   P+  TYN LI 
Sbjct: 367 PSV--------------VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G CK   ++ A+ L  ++  + L P  +TY +LI+G  +V+  E A+R+   M +NG  P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y   +   C+                   GR +E+    +    KG   N +    
Sbjct: 473 DQWTYSVFIDTLCKE------------------GRVEEAGTLFDSVKAKGVKANEV---- 510

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        YT  + G C+ G++  A ++   ++    +    +   LI GLCK  
Sbjct: 511 ------------IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +  A  +    L  G  ++P V  Y +      KD    HA  +   M S+GY  D C 
Sbjct: 559 KMKEASSLVAKMLTMG--VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 745 Y 745
           Y
Sbjct: 617 Y 617


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 189/656 (28%), Positives = 314/656 (47%), Gaps = 39/656 (5%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPN 77
            P+L  LLP L+ + V+S+     +PQ    FF W A R   + +  S S+++++L    
Sbjct: 56  HPSLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNIL---- 111

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK---EFDCQPDVY 134
                      +R+  + V   +   +I     + D    LE F KM    EF  +P + 
Sbjct: 112 -----------IRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLR 160

Query: 135 IYNAVLNIAFRKQLFLLAL-AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
            YN +L ++  K L +  +  VY E++     PNI TF+ ++NG  K G    A     +
Sbjct: 161 CYNTIL-MSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASK 219

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           + Q G+ P+ FTYT +I G C+    D AY +FL M   GC  + V+Y  L++G C+  R
Sbjct: 220 IVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGR 279

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           ++EAL L     +D   P + +Y+ LI  L  + R  EA   + +M E+  EP+V  Y V
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL +  K+ +A K+LS+M E+G++P    YNALI G+C  G++D A  +   +    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PNT T+  LICG+C+   V  A  L NKM +    PS+  +N+LI G CK  +LE A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA- 458

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
              Y++         L L      V D+ +    ++  C  G + +A  +   +   G  
Sbjct: 459 ---YRL---------LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            + + Y +LI+G+CKVG I+ A  L + +      P+S TY  LI GL +  + ++A  +
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFL 611
             +M   G  P+   Y  L+    +   F  A  ++  ++  +  + D    +  +  + 
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF-NHMVSLGYQPDVCTYTAFLHAYF 625

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CK 665
            +G +E     + +M+ +     L  YT+ + G  + G    A +    +V+  CK
Sbjct: 626 SQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 174/645 (26%), Positives = 300/645 (46%), Gaps = 26/645 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G+ +    + A E F  M +  CQ +   Y  +++          AL ++ +M
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + NC P + T+++LI  LS SG+   A+ + +EM ++G  PN  TYT++I GLC+ N+ 
Sbjct: 291 TEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKM 350

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++  +M + G  P  V YNAL++G+CK   +D+A  +L   E +   P   +Y+ L
Sbjct: 351 DEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL + ++  +A A   KM E K+ P ++ Y  +I G  +   ++ A +LLS M E G+
Sbjct: 411 ICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGL 470

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD + Y+  I   C  G +++A +L   +  +    N   +T LI G C+ G +D A  
Sbjct: 471 VPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYS 530

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L  +M    C P+   +N LI+GLCK  ++++A+ L  KM  +G  PT+           
Sbjct: 531 LLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV----------- 579

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++ +    G    A K+   +   G  PD+ TY + ++ +   G +     +
Sbjct: 580 ---VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM-TWSC 577
             ++  +G+ PD VTY  LI+G  R+     AF     M   GC PS  +   L+   S 
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             R       + +  + +++  D      I +  +  E E A++   +M        ++ 
Sbjct: 697 ENRMKETRSEIGIDSVSNVNSVD------IADVWKTLEYEIALKLFEKMVEHGCTIDVSI 750

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y   + G CQ  +++EA  +   + E     +      L+   CK G    A+ +    +
Sbjct: 751 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 810

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHA-YHLLCRMKSVGYDLD 741
           +NG +        L+  L     N+K  A +H L    S GY+ D
Sbjct: 811 ENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL---SCGYNYD 852



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 185/701 (26%), Positives = 295/701 (42%), Gaps = 128/701 (18%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV---------------LISGYYKV 111
           S ++   L P+ F      L   R+  V    +VF +               LI G  + 
Sbjct: 218 SKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEA 277

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G   +AL+ F  M E +C P V  Y  ++         + AL ++ EM +  C PN+ T+
Sbjct: 278 GRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI+GL K  K + A KML EM+++G++P+  TY  +I G C+    D+A+ +   M+ 
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSF--------------------------- 264
           + C P+   YN L+ G CK R+V +A+ALL                              
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457

Query: 265 --------EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
                    ++G VP   +YS  ID L +  R +EA   +  +  + ++ + V+Y  +I 
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  + GK+  A  LL  M     +P++Y YN LI+G C    + +A SL  ++      P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T+TILI  M ++G  D A K+FN M   G  P V  + A +      G LE+ + + 
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            KM E G  P              D  +   +++ Y   GL H+A+  L  + ++G  P 
Sbjct: 638 AKMNEEGILP--------------DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683

Query: 496 IITYNSLIN---------------GFCKVGNING--------------ALKLFKELQLKG 526
           +   + LI                G   V N+N               ALKLF+++   G
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
              D   YG LI G  + +R E+A  +   M + G +PS  +Y SL+   C+        
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK-------L 796

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            ++ + +R                L    VEN +  LLE            Y + + GL 
Sbjct: 797 GVYAEAVR----------------LVDAMVENGLLPLLE-----------SYKLLVCGLY 829

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            +G  ++A  +F  L+ C       +   LI GL KR  +D
Sbjct: 830 IEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 870



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 231/541 (42%), Gaps = 54/541 (9%)

Query: 209 VISGLCQINRADEAYRLFLKMKDSG---CSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +I   C I        +F KM   G     P    YN +L    K   +DE   +     
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +   P + +++ +++G  +     EA  +  K+ +  + PD   Y  +I G      V 
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A ++   M ++G   +   Y  LI G C+ G +++A  L  ++ + +  P   T+T+LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
             +  +G   +A  LFN+M++ GC P+V  +  LIDGLCK  ++++A  +  +M E G  
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P++               +   +++ YC  G+I  A++IL  +  +   P+  TYN LI 
Sbjct: 367 PSV--------------VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELIC 412

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G CK   ++ A+ L  ++  + L P  +TY +LI+G  +V+  E A+R+   M +NG  P
Sbjct: 413 GLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVP 472

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y   +   C+                   GR +E+    +    KG   N +    
Sbjct: 473 DQWTYSVFIDTLCKE------------------GRVEEAGTLFDSVKAKGVKANEV---- 510

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        YT  + G C+ G++  A ++   ++    +    +   LI GLCK  
Sbjct: 511 ------------IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +  A  +    L  G  ++P V  Y +      KD    HA  +   M S+GY  D C 
Sbjct: 559 KMKEASSLVAKMLTMG--VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616

Query: 745 Y 745
           Y
Sbjct: 617 Y 617



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 29/403 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I  L K    +      D +++  V     ++  LI GY KVG  + A     +M  
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+ Y YN ++    +++    A ++  +M+ +   P +VT+++LI  + K G  + 
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ + M   G  P+  TYT  +         +E   +  KM + G  PD V Y  L++
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR------------------ 288
           G+ +L     A   L+     G  P L   S LI  L    R                  
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNS 717

Query: 289 -----------YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
                      Y+ A   + KM E     DV +YG +I G  +  ++++A  L+  M+ER
Sbjct: 718 VDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKER 777

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ P    YN+L+   C LG+  +A  L   + +   LP   ++ +L+CG+   G  + A
Sbjct: 778 GMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 837

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + +F+ +   G       +  LIDGL K   +++ + L   ME
Sbjct: 838 KAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIME 880



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 29/305 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  + + +I  +LK   FD   +  + + S         +   +  Y+  G  E+  +  
Sbjct: 578 TVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS-- 179
            KM E    PD+  Y  +++   R  L   A      MV   C P++   S+LI  LS  
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697

Query: 180 ---------------------------KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
                                      K+ + E+A+K+ ++M + G   +   Y  +I+G
Sbjct: 698 NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQ  R +EA  L   MK+ G SP    YN+LL+  CKL    EA+ L+ +  ++G +P 
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L SY  L+ GL+     ++A A +  +       D V + V+I GL +   V +  +L+ 
Sbjct: 818 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 877

Query: 333 DMRER 337
            M E+
Sbjct: 878 IMEEK 882



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 3/182 (1%)

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           NS  I+ + K   +++  +  +++     ++   ++  LI+G+ +    E+A      MK
Sbjct: 716 NSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           E    P   IYN++L+   +  ++  A+ +   MV+   LP + ++ LL+ GL   G  E
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL--FLKMKDSGCSPDFVAYNA 243
            A  +   +   G   ++  + ++I GL + +  DE   L   ++ KD+    D +A  A
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQAD-IACAA 894

Query: 244 LL 245
           L+
Sbjct: 895 LM 896


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 186/657 (28%), Positives = 312/657 (47%), Gaps = 34/657 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ ++I G  +VGD ++A+E    M E    P+ Y Y  +     R +    A   + EM
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    P+    S LI+G  + G  +  +++ D M   GI  N  TY ++I GLC+  + 
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  +   M   GC P+   +  L+ G+C+   +  AL LL   EK   VP   SY  +
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL   K    A     KM    ++P+VV+Y ++I   +  G++++A +LL  M   G+
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD +CYNA+I      G +++A +  +EI  R   P+  TF   I G  + G + +A K
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP------------- 445
            F++M   G  P+  ++  LI+G  KAG L +A  +F ++  +G  P             
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624

Query: 446 ---------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
                     +F  L + G  V D  +  +++  +C  G + KA+++  ++   G  P+I
Sbjct: 625 KNGRVQEALKVFSELKEKG-LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
             YN+L++G CK G+I  A KLF  +  KGL PDSVTY T+I+G  + +   +AF +F +
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           MP  G  P   VY +L+   C+      A +L+ + L+            I+ + +  ++
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 803

Query: 617 ENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           + A Q   EM  K    Q+ P    YT  +   C+ G+++EA  +F  + E   IV   +
Sbjct: 804 QEASQLFQEMIAK----QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
              L++G  K G       +F   +  G  ++P    Y L      K++  V A+ L
Sbjct: 860 YTSLMYGYNKLGQSSEVFALFEKMVAKG--VKPDEVTYGLVIYAHCKEDNLVEAFKL 914



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 186/692 (26%), Positives = 330/692 (47%), Gaps = 33/692 (4%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            SA+I   ++    D   +  D + S  + +    + VLI G  K G  EKA E    M  
Sbjct: 337  SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              C+P+   +  ++    R+     AL +  EM K N +P+ V++  +INGL       +
Sbjct: 397  LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A K+L++MT  G+ PN   Y+I+I       R +EA RL   M  SG +PD   YNA+++
Sbjct: 457  ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  +++EA   L   +  G  P   ++   I G  +  +  EA  ++ +M +  + P
Sbjct: 517  CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 576

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +  LY V+I G  +AG + +A+ +   +   G++PD    +A I G    G + +A  + 
Sbjct: 577  NNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 636

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             E+ ++  +P+  T++ LI G C+ G V+ A +L ++M   G  P++ ++NAL+DGLCK+
Sbjct: 637  SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 696

Query: 427  GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G++++A  LF  M E G  P              D  +  TM++ YC +  + +A+ +  
Sbjct: 697  GDIQRARKLFDGMPEKGLEP--------------DSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 486  QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            ++   G  P    YN+L++G CK G++  A+ LF+E+  KG    ++++ TLI+G  +  
Sbjct: 743  EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 801

Query: 546  REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
            + ++A ++F +M      P    Y +++ W C+  K   A  L+ +        D  +  
Sbjct: 802  KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861

Query: 606  SI----EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
            S+     +  Q  EV    + ++    K ++     Y + +   C++  + EA  +   +
Sbjct: 862  SLMYGYNKLGQSSEVFALFEKMVAKGVKPDE---VTYGLVIYAHCKEDNLVEAFKLRDEV 918

Query: 662  VECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
            V  K ++T  +    LI  LCKR  L  A  +     + G       CN L+RS  F + 
Sbjct: 919  VG-KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRS--FHEA 975

Query: 721  NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             K   A  +   +KS+G      L P T +L+
Sbjct: 976  GKMDEATRVFEGVKSLG------LVPDTTTLI 1001



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 267/533 (50%), Gaps = 14/533 (2%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR  + S  S  A+I+ L       L  + L+++    +     V+ +LI  Y   G  E
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A      M      PD++ YNA+++   +      A     E+      P+ VTF   I
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G SK+GK   A K  DEM   G++PN   YT++I+G  +     EA  +F ++   G  
Sbjct: 551 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVL 610

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD    +A ++G  K  RV EAL +    ++ G VP + +YS LI G  +    ++A+  
Sbjct: 611 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M  + I P++ +Y  ++ GL ++G ++ A KL   M E+G+ PD+  Y+ +I G+C 
Sbjct: 671 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 730

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A SL  E+  +   P++  +  L+ G C+ G ++ A  LF +M + G F +   
Sbjct: 731 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLS 789

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           FN LIDG CK+ ++++A+ LF +M I K              + D  +  T+++ +C AG
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEM-IAKQI------------MPDHVTYTTVIDWHCKAG 836

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +  ++ E   + D +TY SL+ G+ K+G  +    LF+++  KG++PD VTYG
Sbjct: 837 KMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 896

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +I    + D   +AF++  ++   G      ++  L+T  C+R   + A  L
Sbjct: 897 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 949



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 158/640 (24%), Positives = 263/640 (41%), Gaps = 121/640 (18%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V F +LI+   + G  + A  +        IL +      ++  L +    +  ++++  
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M D+    D   Y  L+   CK   +  A  +L   ++ G  P    YS +I+G+ +   
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD------ 342
            DEA    R M E+ + P+   Y ++  GL  A ++ +A     +M++ G+ PD      
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 343 -----------------------------TYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
                                           YN LI G C  G +++A  +   +    
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN+ TF +LI G CR   +  A +L ++MEK    PS   + A+I+GLC   +L  AN
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            L  KM   G  P + +                 ++  Y + G I +A ++L  ++ SG 
Sbjct: 459 KLLEKMTFSGLKPNVVV--------------YSILIMAYASEGRIEEARRLLDGMSCSGV 504

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDI  YN++I+   K G +  A     E+Q +GL+PD+VT+G  I G  +  +  +A +
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-----LQYLRDI----------- 596
            F +M  +G  P+  +Y  L+    +      A S++     L  L D+           
Sbjct: 565 YFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLL 624

Query: 597 -SGRDDESMKSIEEFLQKGEVENAI-----------QGLLEMDFKLNDFQ----LAP--- 637
            +GR  E++K   E  +KG V +             QG +E  F+L+D      +AP   
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVE-----------------CKAI------------ 667
            Y   + GLC+ G ++ A  +F  + E                 CK+             
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 668 ----VTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGF 701
               V P S V   L+HG CK G ++ AM++F   L+ GF
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 784



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 244/510 (47%), Gaps = 45/510 (8%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G SP  V ++ L++ + ++  +DEA  +    + D  +  L   + L+  L +    +  
Sbjct: 155 GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           +  Y  M + K+  DV  Y  ++  L + G ++ A ++L +M E+G+ P+ + Y+ +I+G
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C +G +D+A  L+  + ++  +PNT+T+TI+  G+CR   +++A+  F +M+K G  P 
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332

Query: 413 VGMFNALIDGLCKAGELEKA--------------NLLFYKMEIGKNPTLFLRLSQGGNRV 458
               +ALIDG  + G++++               NL+ Y + I      F ++ +    +
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI-HGLCKFGKMEKAAEIL 391

Query: 459 HDKASLQT---------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
               +L           ++E YC    + +A ++L ++ +   +P  ++Y ++ING C  
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 451

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            +++ A KL +++   GL+P+ V Y  LI       R E+A R+   M  +G  P    Y
Sbjct: 452 KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCY 511

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAIQGLL 624
            ++++   +  K   A +    YL +I GR    D  +  + I  + + G++  A +   
Sbjct: 512 NAIISCLSKAGKMEEAST----YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD 567

Query: 625 EMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           EM     D  L P    YT+ + G  + G + EAL+IF  L     +    +C   IHGL
Sbjct: 568 EM----LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            K G +  A+ VF    + G +  P V  Y
Sbjct: 624 LKNGRVQEALKVFSELKEKGLV--PDVFTY 651



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 178/385 (46%), Gaps = 1/385 (0%)

Query: 38   IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
            ++K    Q   + F    ++  +    + S++IS   K    +  ++  DE+    ++  
Sbjct: 623  LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
              ++  L+ G  K GD ++A + F  M E   +PD   Y+ +++   + +    A ++++
Sbjct: 683  IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 742

Query: 158  EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            EM      P+   ++ L++G  K G  E A+ +  EM Q+G      ++  +I G C+  
Sbjct: 743  EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 801

Query: 218  RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
            +  EA +LF +M      PD V Y  +++  CK  +++EA  L +  ++   +    +Y+
Sbjct: 802  KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 861

Query: 278  CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
             L+ G  +  +  E +A + KM  + ++PD V YG++I    +   + +A KL  ++  +
Sbjct: 862  SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 921

Query: 338  GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            G++     ++ LI   C    L +A  L  E+ +    P+      L+      G +D+A
Sbjct: 922  GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEA 981

Query: 398  QKLFNKMEKAGCFPSVGMFNALIDG 422
             ++F  ++  G  P       L++G
Sbjct: 982  TRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 5/285 (1%)

Query: 83   WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVL 140
            +    E+ S  V   S V+  L+ G  K GD EKA+  F +M  K F        +N ++
Sbjct: 738  FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF---ATTLSFNTLI 794

Query: 141  NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
            +   +      A  ++ EM+    +P+ VT++ +I+   K+GK E A  +  EM +R ++
Sbjct: 795  DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 854

Query: 201  PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
             +  TYT ++ G  ++ ++ E + LF KM   G  PD V Y  ++   CK   + EA  L
Sbjct: 855  VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914

Query: 261  LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                   G + +   +  LI  L + +   EA     +M E  ++P +     ++R   E
Sbjct: 915  RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974

Query: 321  AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            AGK+ +A ++   ++  G+VPDT     L+ G  +    + AR+L
Sbjct: 975  AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 170/614 (27%), Positives = 313/614 (50%), Gaps = 54/614 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +++G+Y+ GD ++A E F +M E    PDV  +N +++   +K   L +  ++ ++
Sbjct: 262 AYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKV 321

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K    PN+ TF++ I GL K G  + A+++L  +++ G+ P+  TY  VI GLC+ +R 
Sbjct: 322 LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV 381

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA     KM + G  P+   YN++++G+CK   V +A  +L+     GF P   +Y  L
Sbjct: 382 VEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSL 441

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++G  +    D+A A ++    + + P +++Y  +I+GL + G +  A++L+++M E+G 
Sbjct: 442 VNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGC 501

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + YN +I G C +G L  A  L  +   +  +P+  T+  L+ G CR   +D A +
Sbjct: 502 KPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIE 561

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L N+M   G  P V  +N L++GLCK  + E+   +F  M E G  P +           
Sbjct: 562 LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNII---------- 611

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T++E  C +  +++A  +L ++   G  PD++++ +LI GFCKVG+++GA  L
Sbjct: 612 ----TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGL 667

Query: 519 FKELQLK-GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           F+ ++ +  +   + TY  +I+        + A R+F +M +NGC P    Y+ L+   C
Sbjct: 668 FRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 727

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +                  +G  ++  K + E ++KG + +                L  
Sbjct: 728 K------------------TGNVNQGYKFLLENIEKGFIPS----------------LTT 753

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT- 696
           +   L  LC + +V+EA+ I  ++V+ K IV  P  V  I    K+G++      FLY  
Sbjct: 754 FGRVLNCLCVEHKVQEAVGIIHLMVQ-KDIV--PDTVNTIFEADKKGHITYHAYEFLYDG 810

Query: 697 LKNGFILRPRVCNY 710
           +++  IL+ +  N+
Sbjct: 811 VRDKKILKKKHPNW 824



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 181/690 (26%), Positives = 314/690 (45%), Gaps = 55/690 (7%)

Query: 79  FDLYWQTLDELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           F+     L E+RS  + +++  V+   +  Y + G  ++A+++F +M  F+C P VY YN
Sbjct: 135 FNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYN 194

Query: 138 AVLNIAFRKQLFLLALAVYYEMVK-----------------------------------L 162
           A++NI      F  A  VY  M                                     L
Sbjct: 195 AIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVL 254

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C  N V +  ++ G  + G  + A ++ DEM +  + P+  T+  ++  LC+     E+
Sbjct: 255 GCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLES 314

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RLF K+   G  P+   +N  + G CK   +D A+ LL    ++G  P + +Y+ +I G
Sbjct: 315 ERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICG 374

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L R  R  EA     KM     EP+   Y  +I G  + G V DA ++L D   +G  PD
Sbjct: 375 LCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPD 434

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + Y +L+ GFC  G  DQA ++  +   +   P+   +  LI G+C+ G++  A +L N
Sbjct: 435 EFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMN 494

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M + GC P +  +N +I+GLCK G L  AN L     IG        +++G   + D  
Sbjct: 495 EMAEKGCKPDIWTYNLIINGLCKMGCLSDANHL-----IGD------AITKGC--IPDIF 541

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+V+ YC    +  A +++ ++   G  PD+ITYN+L+NG CK       +++FK +
Sbjct: 542 TYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAM 601

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG  P+ +TY T+I  L    +  +A  + G+M   G TP    + +L+T  C+    
Sbjct: 602 TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDL 661

Query: 583 SLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
             A+ L+  ++   D+S         I  F ++  ++ A++   EM     D     Y +
Sbjct: 662 DGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRV 721

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C+ G V +        +E   I +  +  ++++ LC    +  A+ +    ++  
Sbjct: 722 LIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKD 781

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +  P   N +  +    K +   HAY  L
Sbjct: 782 IV--PDTVNTIFEA--DKKGHITYHAYEFL 807



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 204/494 (41%), Gaps = 61/494 (12%)

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMR--------------------ERGIV---------- 340
           Y  M++ L   GK  +   LLS+MR                     +G +          
Sbjct: 122 YKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERM 181

Query: 341 ------PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
                 P  Y YNA++    + G  +QA  + + +  +    + +T+TI I   CR G  
Sbjct: 182 DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRP 241

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQ 453
             A +L   M   GCF +   +  ++ G  + G+ ++A  LF +M E    P        
Sbjct: 242 YAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP-------- 293

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +   +V   C  G + ++ ++  ++ + G  P++ T+N  I G CK G+++
Sbjct: 294 ------DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A++L   +  +GLRPD VTY T+I GL R  R  +A     +M   G  P+   Y S++
Sbjct: 348 RAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSII 407

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLND 632
              C++     A  +    +      D+ +  S +  F Q G+ + A+    +   K   
Sbjct: 408 DGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR 467

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAM 690
             +  Y   + GLCQ G +  AL + + + E  CK  +   + +  I+GLCK G L  A 
Sbjct: 468 PSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI--INGLCKMGCLSDAN 525

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKS 750
            +    +  G I  P +  Y      + +  K   A  L+ RM S G   D   Y    +
Sbjct: 526 HLIGDAITKGCI--PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITY---NT 580

Query: 751 LLPGPWNTREMENM 764
           LL G   T + E +
Sbjct: 581 LLNGLCKTAKSEEV 594


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 163/479 (34%), Positives = 250/479 (52%), Gaps = 13/479 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      + Y Y+ +LN   R+    LALAV  +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT S L+NG     +   A+ ++D+M + G  P+  T+  +I GL   N+A 
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD   Y  ++NG CK   +D AL+LL+  EK      +  Y+ +I
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL + K  D+A+  + KM  + I+PDV  Y  +I  L   G+  DA +LLSDM ER I 
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   +N+LI  F   G L +A  L  E+ +R   PN  T+  LI G C +  +D+AQ++
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M    C P V  +N LI G CKA  +E+       ME      LF  +SQ G  V +
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 430

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T+++    AG    A KI  ++   G  PDIITY+ L++G CK G +  AL +F+
Sbjct: 431 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 490

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            LQ   + P+  TY  +I G+ +  + ED + +F  +   G  P+  +Y ++++  CR+
Sbjct: 491 YLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 264/529 (49%), Gaps = 13/529 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    K +   S    S ++S + K N FD+     +++++  +      + +L++ + 
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFC 127

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +PD+   +++LN     +    A+A+  +MV++   P+ V
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M  RG  P+ FTY  V++GLC+    D A  L  KM
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +      + V YN +++G CK + +D+A  L    E  G  P + +Y+ LI  L    R+
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E KI P+VV +  +I   ++ GK+ +A KL  +M +R I P+   YN+L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GFC    LD+A+ +   +  +D LP+  T+  LI G C+   V++  +LF +M + G 
Sbjct: 368 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 427

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +   +N LI GL +AG+ + A  +F KM     P              D  +   +++
Sbjct: 428 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------------DIITYSILLD 474

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + KA  +   L +S   P+I TYN +I G CK G +     LF  L LKG++P
Sbjct: 475 GLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + + Y T+I+G  R   +E+A  +F +M ++G  P    Y +L+    R
Sbjct: 535 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLR 583



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 172/594 (28%), Positives = 293/594 (49%), Gaps = 55/594 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A++ EMVK    P+I+ FS L++ ++K  K +V I + ++M   GI  N +TY+I+++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  PD V  ++LLNG+C  +R+ EA+AL+    + G+ P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M     +PD+  YG ++ GL + G +  A+ LL
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +  I  +   YN +I G C    +D A  L  ++  +   P+  T+  LI  +C  
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G   DA +L + M +    P+V  FN+LID   K G+L +A  LF +M         ++ 
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM---------IQR 355

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S   N V    +  +++  +C    + +A +I   +     LPD++TYN+LI GFCK   
Sbjct: 356 SIDPNIV----TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +   ++LF+E+  +GL  ++VTY TLI GL +    + A +IF +M  +G  P    Y  
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+  K   A  ++                   E+LQK ++E  I           
Sbjct: 472 LLDGLCKYGKLEKALVVF-------------------EYLQKSKMEPNIY---------- 502

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
                 Y I + G+C+ G+V++  ++F  L   K +   P+ +    +I G C++G  + 
Sbjct: 503 -----TYNIMIEGMCKAGKVEDGWDLFCSL-SLKGV--KPNVIIYTTMISGFCRKGLKEE 554

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           A  +F    ++G +      N L+R+ L  +D  K  +  L+  M+S G+  DA
Sbjct: 555 ADALFREMKEDGTLPDSGCYNTLIRARL--RDGDKAASAELIKEMRSCGFVGDA 606



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 207/397 (52%), Gaps = 8/397 (2%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL    L ++  G +     ++  +I G  K    + A + F KM+  
Sbjct: 226 TVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 285

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +PDV+ YN++++       +  A  +  +M++    PN+VTF+ LI+  +K GK   A
Sbjct: 286 GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEA 345

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM QR I PN  TY  +I+G C  +R DEA ++F  M    C PD V YN L+ G
Sbjct: 346 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG 405

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + L R   + G V    +Y+ LI GLF+A   D A   ++KM  + + PD
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 465

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL + GK++ A+ +   +++  + P+ Y YN +I+G C  G ++    L  
Sbjct: 466 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN   +T +I G CR G+ ++A  LF +M++ G  P  G +N LI    + G
Sbjct: 526 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 585

Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
           +   +  L  +M     +G   T+ + +    N +HD
Sbjct: 586 DKAASAELIKEMRSCGFVGDASTISMVI----NMLHD 618



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   ++ S  V     
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K G  EKAL  F  +++   +P++Y YN                      
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYN---------------------- 505

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ PN   YT +ISG C+    
Sbjct: 506 -------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  PD   YN L+    +LR  D+A +  L++     GFV    + S
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 610

Query: 278 CLIDGLFRAKRYDEAY 293
            +I+ +    R +++Y
Sbjct: 611 MVIN-MLHDGRLEKSY 625


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 193/698 (27%), Positives = 322/698 (46%), Gaps = 41/698 (5%)

Query: 89  LRSGNVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           +R   + V  D   + +LI  + ++G  E    +FG + +   + +  + N +L      
Sbjct: 83  IRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDA 142

Query: 147 QLFLLALAVYYE-MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ---RGILPN 202
           +    A+ +  + M +L C P++V+++ L+ G     + E A+++L  M     R   PN
Sbjct: 143 KRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPN 202

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             +Y IVI+G     + D+AY LFL+M D G  P+ V Y  +++G CK + VD A  + +
Sbjct: 203 VVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G  P   +Y+CLI G     ++ E      +M    ++PD   YG ++  L   G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           + ++A  L   M  +GI P+   Y  LI G+   G L +   L   + +    P+ H F 
Sbjct: 323 RCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFN 382

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEI 441
           I+     +  M+D+A  +FNKM++ G  P V  + ALID LCK G ++ A L F + M  
Sbjct: 383 IIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442

Query: 442 GKNPTLFL-----------------------RLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           G  P +F+                        L+QG     D     T++   CT G + 
Sbjct: 443 GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRP--DVVFFNTILCNLCTKGQVM 500

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KA +++  +   G  P +I+Y +LI G C VG I+ A K    +   GL+PD  TY TL+
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +G  R  R +DA+ +F +M +NG TP    Y +++      R+FS A  L+L  +     
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 599 RDDESMKSIEEFLQKG----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            +      I   L K     E     Q L   DF+L   ++  + I +  L + G+ ++A
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQL---EITTFNIMIGALFKSGRNEDA 677

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           +++F+ +     +    +   +   L + GYL+   D+F    K+G     R+ N L+R 
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           LL   D  +  AY  LC++    + L+A       SLL
Sbjct: 738 LLHRGDITRAGAY--LCKLDEKNFSLEASTTAMLISLL 773



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 237/529 (44%), Gaps = 17/529 (3%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            +  F+    R    +  + + VI  L K    D       ++    V   +D +  LI 
Sbjct: 222 AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIH 281

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           GY  +G  ++ +    +M     +PD Y Y ++LN          A  ++  M++    P
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKP 341

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+  + +LI+G +  G       +L+ M + G+ P+   + I+ +   +    DEA  +F
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            KMK  G SPD V Y AL++  CKL RVD+A+        +G  P +  ++ L+ GL   
Sbjct: 402 NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            ++++A  +Y +M  + I PDVV +  ++  L   G+V  A +L+  M   G  P    Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISY 521

Query: 347 NALIKGFCDLGLLDQ-ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
             LI G C +G +D+ A+SL V +      P+  T+  L+ G CR G +DDA  +F +M 
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDV-MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           + G  P V  ++ ++ GL       +A  L+  M   GK   +++              L
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIY----------NIIL 630

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             + +  C    + +A+K+   L       +I T+N +I    K G    A+ LF  +  
Sbjct: 631 NGLSKNNC----VDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISS 686

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            GL PD  TY  +   L      E+   +F  M ++G TP+  +  +L+
Sbjct: 687 YGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 199/452 (44%), Gaps = 15/452 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +LI GY   G   +  +    M E    PD +I+N +     +K +   A+ ++ +M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++V +  LI+ L K G+ + A+   ++M   G+ PN F +  ++ GLC +++ 
Sbjct: 405 KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKW 464

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A   + +M + G  PD V +N +L   C   +V +A  L+   E+ G  P + SY+ L
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL 524

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G     R DEA      M    ++PD   Y  ++ G   AG++ DA  +  +M   GI
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y+ ++ G        +A+ L + +       N   + I++ G+ +N  VD+A K
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           LF  +        +  FN +I  L K+G  E A  LF  +   G  P +F          
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF---------- 694

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   + E     G + +   +   + +SG  P+    N+L+      G+I  A   
Sbjct: 695 ----TYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAY 750

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
             +L  K    ++ T   LI+ L R +    A
Sbjct: 751 LCKLDEKNFSLEASTTAMLISLLSRDEYHHHA 782



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 4/227 (1%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D Y    + LR+G    V   +  ++ G +      +A E +  M     Q +++IYN +
Sbjct: 571 DAYGVFREMLRNGITPGVV-TYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           LN   +      A  ++  +   +    I TF+++I  L KSG+ E A+ +   ++  G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +P+ FTY ++   L +    +E   LF  M+ SG +P+    NAL+        +  A A
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW---YRKMFEEK 303
            L   ++  F     + + LI  L R + +  A +    YR + E K
Sbjct: 750 YLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAK 796


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/443 (35%), Positives = 245/443 (55%), Gaps = 20/443 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+SG    G    A   + +M +    PDV  YN +L+   +      AL ++   V
Sbjct: 13  YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +P++VT++ LING  K+ K + A ++L  M    ++P+  TY  +++GLC+  R D
Sbjct: 73  KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           EA  L +   D G SP+ + Y+ L++G C+ LR V EAL L  S  K G+ P + +Y+ L
Sbjct: 133 EARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +  R +EA+  +  + +  +EPD + Y V I GL +AG+V+DA+ +L DM E+G 
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 249

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD   +NA+I G C    +D+A  L   +  +   PN  +F  LICG CR G    A  
Sbjct: 250 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 309

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA---GELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
            F +M K G  P+V  +N L+DGLCKA   G +++A  LF  M           + +G  
Sbjct: 310 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM-----------IEKG-- 356

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           RV D  +   +++    AG +  A ++L  +   G +P++ TYNSLI+G C +  ++ AL
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 517 KLFKELQLKGLRPDSVTYGTLIN 539
           +LF  +  KG  PD++TYGT+I+
Sbjct: 417 ELFVAMVEKGCVPDTITYGTIIS 439



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 146/456 (32%), Positives = 246/456 (53%), Gaps = 22/456 (4%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M++    P+   YNA+L+          A A+Y  M+K    P++VT++ L++G  K G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A+K+ D   +RG +P+  TY  +I+G C+ ++ DEA R+  +M      PD V YN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR-YDEAYAWYRKMFEE 302
           L+NG CK  RVDEA  L+      GF P + +YS LI GL R  R   EA   +  + ++
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             EP+V  Y ++I GL +  +V +A +L S + + G+ PD   Y   I G C  G ++ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +  ++ ++  +P+  +   +I G+C+   VD+A+ L + ME  GC P+   FN LI G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA---GLIH 478
            C+AG+ +KA   F +M + G  PT+               +   +V+  C A   G I 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVV--------------TYNILVDGLCKARQEGRIK 343

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A  +   + E G +PD++TY++LI+G  K G ++ A +L   ++ KG  P+  TY +LI
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +GL  +++ ++A  +F  M + GC P    Y ++++
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 223/430 (51%), Gaps = 22/430 (5%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN +T++ L++GL   G+   A  + + M + G  P+  TY  ++ G C++   DEA ++
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F      G  PD V YNAL+NGFCK  ++DEA  +L+    +  VP + +Y+ L++GL +
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL-SEAGKVKDAMKLLSDMRERGIVPDTY 344
             R DEA      + ++   P+V+ Y  +I GL  E   V +A+KL   + ++G  P+  
Sbjct: 128 NGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN LI G      +++A  L   + K    P+  T+T+ I G+C+ G V+DA  +   M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKAS 463
           ++ GC P V   NA+I+GLCK   +++A +L   ME  G +P                 S
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI--------------S 290

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV---GNINGALKLFK 520
             T++   C AG   KA     ++ + G  P ++TYN L++G CK    G I  A+ LF 
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +  KG  PD VTY  LI+GL +  + +DA R+ G M   GC P+   Y SL++  C   
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410

Query: 581 KFSLAFSLWL 590
           K   A  L++
Sbjct: 411 KVDEALELFV 420



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 205/431 (47%), Gaps = 56/431 (12%)

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K GF P   +Y+ L+ GL    R  +A A Y +M +    PDVV Y  ++ G  + G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + +A+K+     +RG VPD   YNALI GFC    LD+A+ +   +   + +P+  T+  
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA--GELEKANLLFYKMEI 441
           L+ G+C+NG VD+A+ L   +   G  P+V  ++ LI GLC+   G  E   L    ++ 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P +               +   +++       +++A+++   L + G  PD ITY  
Sbjct: 178 GYEPEV--------------PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            I+G CK G +  AL + K++  KG  PD V++  +INGL +  R ++A  +   M   G
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           C+P+   + +L+   CR                  +G+  ++M + +E L++G     + 
Sbjct: 284 CSPNAISFNTLICGQCR------------------AGKWKKAMTTFKEMLKRGVKPTVVT 325

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLC---QDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                           Y I + GLC   Q+G++KEA+ +F  ++E   +    +   LI 
Sbjct: 326 ----------------YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 369

Query: 679 GLCKRGYLDLA 689
           GL K G LD A
Sbjct: 370 GLGKAGKLDDA 380



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 3/250 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  LLK +  +  ++    L    +   +  + V I G  K G  E AL     M E  
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PDV  +NAV+N   +++    A  +   M    C PN ++F+ LI G  ++GK + A+
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLC---QINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
               EM +RG+ P   TY I++ GLC   Q  R  EA  LF  M + G  PD V Y+AL+
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 368

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G  K  ++D+A  LL + E  G +P + +Y+ LI GL   ++ DEA   +  M E+   
Sbjct: 369 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCV 428

Query: 306 PDVVLYGVMI 315
           PD + YG +I
Sbjct: 429 PDTITYGTII 438



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S++AVI+ L K    D     L  + +   S  +  F  LI G  + G  +KA+ +F +M
Sbjct: 255 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 314

Query: 125 KEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +   +P V  YN +++    A ++     A+ ++  M++   +P++VT+S LI+GL K+
Sbjct: 315 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 374

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK + A ++L  M  +G +PN +TY  +ISGLC + + DEA  LF+ M + GC PD + Y
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 242 NALLN 246
             +++
Sbjct: 435 GTIIS 439



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 7/226 (3%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G  P+ ITYN+L++G C  G ++ A  L++ +   G  PD VTY TL++G  +V  
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            ++A +IF    + G  P    Y +L+   C+  K   A  +  + + +    D  +  S
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 607 IEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ-VKEALNIFSVLVEC 664
           +   L K G V+ A   +++  F  N   +  Y+  + GLC++ + V EAL +F  +++ 
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPN---VITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
                 P+   LI GL K   ++ A ++F   +K+G  L P    Y
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG--LEPDAITY 221


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 299/611 (48%), Gaps = 28/611 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ F  M      P V  +  ++ +  R +   L +++Y +M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+T ++ GLC  +R  EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F +M ++ C P+ V +  L+NG C+  R+ EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I P+VV+Y  +I  L + G+  DA  L ++M+E+GI PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN++I GFC  G    A  L  E+ +R   P+  T+  LI    + G   +A +L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +N++IDG CK   L+ A  +FY M   G +P +F             
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++   G + + +TYN+LI+GFC VG++N AL L ++
Sbjct: 397 -TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   G+ PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L+       KF  A  L+ +   R I          I+   ++  ++ A Q  + M  K
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +   + G C+ G+V + L +F  +     +      + LI+G  K G ++ A
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 635

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 636 LDIFQEMISSG 646



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 253/513 (49%), Gaps = 31/513 (6%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             D + Q  +     NV      F  L++G  + G   +A+    +M E   QP    Y 
Sbjct: 168 ALDFFHQMFETTCRPNVVT----FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
            +++   +K   + AL +  +M ++ + +PN+V +S +I+ L K G+   A  +  EM +
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +GI P+ FTY  +I G C   R  +A +L  +M +   SPD V YNAL+N F K  +  E
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L       G +P   +Y+ +IDG  +  R D A   +  M  +   PDV  +  +I 
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G   A ++ D M+LL +M  RG+V +T  YN LI GFC +G L+ A  L  ++      P
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKA-----------GCFPSVGMFNALIDGLCK 425
           +  T   L+ G+C NG + DA ++F  M+K+           G  P V  +N LI GL  
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G+  +A  L+ +M     P   +        V D  +  +M++  C    + +A ++ +
Sbjct: 524 EGKFLEAEELYEEM-----PHRGI--------VPDTITYSSMIDGLCKQSRLDEATQMFV 570

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +      P+++T+N+LING+CK G ++  L+LF E+  +G+  D++ Y TLI G ++V 
Sbjct: 571 SMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMT--WS 576
               A  IF +M  +G  P     ++++T  WS
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGFWS 663



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 220/462 (47%), Gaps = 59/462 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I    K G    A   F +M+E    PD++ YN+++        +  A  +  EM
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P++VT++ LIN   K GK   A ++ DEM  RGI+PN  TY  +I G C+ +R 
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  +F  M   GCSPD   +  L++G+C  +R+D+ + LL    + G V    +Y+ L
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--- 336
           I G       + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++   
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496

Query: 337 --------RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                    G+ PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 556

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   +D+A ++F  M      P+V  FN LI+G CKAG                     
Sbjct: 557 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG--------------------- 595

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                   RV D       +E +C             ++   G + D I Y +LI GF K
Sbjct: 596 --------RVDDG------LELFC-------------EMGRRGIVADAIIYITLIYGFRK 628

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           VGNINGAL +F+E+   G+ PD++T   ++ G    +  E A
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 177/369 (47%), Gaps = 11/369 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L E+    +S     +  LI+ + K G   +A E + +M      P+   YN++++  
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A  ++Y M    C P++ TF+ LI+G   + + +  +++L EM +RG++ N 
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I G C +   + A  L  +M  SG  PD V  N LL+G C   ++ +AL + ++
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 490

Query: 264 FEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y 
Sbjct: 491 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI GL +  ++ +A ++   M  +   P+   +N LI G+C  G +D    L  E+ +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR 610

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             + +   +  LI G  + G ++ A  +F +M  +G +P       ++ G     ELE+A
Sbjct: 611 GIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 670

Query: 433 NLLFYKMEI 441
             +   +++
Sbjct: 671 VAMLEDLQM 679


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/479 (33%), Positives = 251/479 (52%), Gaps = 13/479 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      ++Y Y+ ++N   R+    LALAV  +M+
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT + L+NG     +   A+ ++ +M + G  P+ FT+  +I GL + NRA 
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD V Y  ++NG CK   +D AL+LL+  E+    P +  Y+ +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L   K  ++A   + +M  + I P+VV Y  +IR L   G+  DA +LLSDM ER I 
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M    CFP+V  +N LI G CKA  +++       ME      LF  +SQ G  V +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEG------ME------LFREMSQRG-LVGN 430

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++  +  A     A  +  Q+   G LPDI+TY+ L++G C  G +  AL +F+
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            LQ   + PD  TY  +I G+ +  + ED + +F  +   G  P+   Y ++M+  CR+
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 259/524 (49%), Gaps = 13/524 (2%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            K +   S    S ++S + K N FDL     +++++  +S     + +LI+ + +    
Sbjct: 73  VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL    KM +   +PD+   N++LN          A+++  +MV++   P+  TF+ L
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL +  +   A+ ++D M  +G  P+  TY IV++GLC+    D A  L  KM+    
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  V YN +++  C  + V++AL L    +  G  P + +Y+ LI  L    R+ +A  
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++LI GFC
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               LD+A+ +   +  +D  PN  T+  LI G C+   VD+  +LF +M + G   +  
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  LI G  +A E + A ++F +M           +S G   + D  +   +++  C  
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQM-----------VSDG--VLPDIMTYSILLDGLCNN 479

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A  +   L  S   PDI TYN +I G CK G +     LF  L LKG++P+ VTY
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            T+++G  R   +E+A  +F +M + G  P    Y +L+    R
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 288/592 (48%), Gaps = 51/592 (8%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV FS L++ ++K  K ++ I + ++M   GI  N +TY+I+I+
Sbjct: 65  AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  PD V  N+LLNGFC   R+ +A++L+    + G+ P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLFR  R  EA A   +M  +  +PD+V YG+++ GL + G +  A+ LL
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +  I P    YN +I   C+   ++ A +L  E+  +   PN  T+  LI  +C  
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P+V  F+ALID   K G+L +A  L+ +M +   +P +F  
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF-- 362

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++  +C    + +A  +   +      P+++TYN+LI GFCK  
Sbjct: 363 ------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++  ++LF+E+  +GL  ++VTY TLI+G  +    ++A  +F QM  +G  P    Y 
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C   K   A  ++                   E+LQ+ ++E  I          
Sbjct: 471 ILLDGLCNNGKVETALVVF-------------------EYLQRSKMEPDIY--------- 502

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y I + G+C+ G+V++  ++F  L          +   ++ G C++G  + A 
Sbjct: 503 ------TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +F    + G +      N L+R+ L  +D  K  +  L+  M+S  +  DA
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 606



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 233/481 (48%), Gaps = 52/481 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++G+        A+   G+M E   QPD + +N +++  FR      A+A+   MV   
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P++VT+ +++NGL K G  ++A+ +L +M Q  I P    Y  +I  LC     ++A 
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-------------------ALLRSF 264
            LF +M + G  P+ V YN+L+   C   R  +A                    AL+ +F
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336

Query: 265 EKDGFV----------------PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+G +                P + +YS LI+G     R DEA   +  M  +   P+V
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I+G  +A +V + M+L  +M +RG+V +T  Y  LI GF      D A+ +  +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +     LP+  T++IL+ G+C NG V+ A  +F  ++++   P +  +N +I+G+CKAG+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +E    LF  + + G  P +               +  TM+  +C  GL  +A  +  ++
Sbjct: 517 VEDGWDLFCSLSLKGVKPNV--------------VTYTTMMSGFCRKGLKEEADALFREM 562

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ--RVD 545
            E G LPD  TYN+LI    + G+   + +L +E++      D+ T G + N L   R+D
Sbjct: 563 KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLD 622

Query: 546 R 546
           +
Sbjct: 623 K 623



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 191/371 (51%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V++ L K    DL    L ++  G +     ++  +I       +   AL  F +M    
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+V  YN+++        +  A  +  +M++    PN+VTFS LI+   K GK   A 
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+ DEM +R I P+ FTY+ +I+G C  +R DEA  +F  M    C P+ V YN L+ GF
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK +RVDE + L R   + G V    +Y+ LI G F+A+  D A   +++M  + + PD+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y +++ GL   GKV+ A+ +   ++   + PD Y YN +I+G C  G ++    L   
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   PN  T+T ++ G CR G+ ++A  LF +M++ G  P  G +N LI    + G+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586

Query: 429 LEKANLLFYKM 439
              +  L  +M
Sbjct: 587 KAASAELIREM 597


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/498 (32%), Positives = 253/498 (50%), Gaps = 35/498 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+ G  +    EKA +  G+MKE  C PD  IYNA+++   + + F  A     EM
Sbjct: 44  TFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK +CLP +VT++ +++GL K+ +T  A+K+LDEM  +G  PN +TY +++ GLC+  + 
Sbjct: 104 VKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 163

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++  +M   G  PD V YN+ + G CK  RVDEA   L         P + SY+ +
Sbjct: 164 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTV 220

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL ++   D A      M      PDVV Y  +I G  + G+V+ AM LL  M + G 
Sbjct: 221 INGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 280

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN+L+     LG + +A  + VE+ +R   P+  ++   I G+C+   V  A+ 
Sbjct: 281 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 340

Query: 400 LFNKMEKAGCFPSVG----------MFNALIDGLCKAGELEKANLLFYKMEIGK--NPTL 447
           +F++M + GC P+            ++  L+DGLCK G  ++A  LF K+   K   P +
Sbjct: 341 VFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV 400

Query: 448 F----LRLSQGGNRVHDKA----------------SLQTMVEQYCTAGLIHKAYKILMQL 487
           F    +  S    R  DKA                +   +V   C    +  A  +L+ +
Sbjct: 401 FFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTM 460

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G +PD +TY +L++  CK G    AL+LF+E    G  PD VTY  LI GL   +  
Sbjct: 461 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 520

Query: 548 EDAFRIFGQMPQNGCTPS 565
           E+A+ +F ++ +    P 
Sbjct: 521 EEAYLLFTKLVERRWVPD 538



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 258/543 (47%), Gaps = 72/543 (13%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + +V+ YN +L    R+     A AV+ EM+  +C P+  TF++L+ GL +S + E A K
Sbjct: 4   EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 190 MLDEMTQRGILPN---------------------KF--------------TYTIVISGLC 214
           +L  M + G +P+                     KF              TYT ++ GLC
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  R  +A +L  +M+D GCSP+   YN ++ G C+ R++DEA  +L      G+ P + 
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+  I GL +  R DEA  +  +M    + PDVV Y  +I GL ++G +  A ++L  M
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             RG  PD   Y++LI GFC  G +++A  L   + K    PN   +  L+  + R G +
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 300

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------- 446
             A+ +  +ME+ G  P V  +NA IDGLCKA  ++KA  +F +M E G  P        
Sbjct: 301 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 360

Query: 447 -----LFLRLSQG---GNRVHDKASL-----------------QTMVEQYCTAGLIHKAY 481
                L+  L  G   G R  +  +L                   M++ +C    I KA 
Sbjct: 361 IVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKAL 420

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +I  Q+ E  N  +++T+N L++G C    ++ A  +   +  +G  PD VTYGTL++ +
Sbjct: 421 QIHKQMLEK-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 479

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  +   A  +F +  + GC P    Y +L+T          A+ L+ + +      DD
Sbjct: 480 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDD 539

Query: 602 ESM 604
           +++
Sbjct: 540 KTL 542



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 276/579 (47%), Gaps = 66/579 (11%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+ T++ L+  L++  + + A  +  EM  +   P+ FT+ I++ GLC+ N+ ++A +L 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +MK+ GC PD   YNAL++G+ K +   +A   L    K+  +P + +Y+ ++DGL +A
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +R  +A     +M ++   P++  Y V++ GL E  K+ +A K+L +M  RG  PD   Y
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N+ IKG C    +D+AR     + +    P+  ++T +I G+C++G +D A ++ + M  
Sbjct: 186 NSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
            GC P V  +++LIDG CK GE+E+A  LL   +++G  P +               +  
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM--------------VAYN 288

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +++      G I KA  +L+++   G  PD+++YN+ I+G CK   +  A  +F  +  +
Sbjct: 289 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 348

Query: 526 GLRPDSVTYGTLI----------NGLQRVDREEDAFRIFGQ-MPQNGCTPSPAVYKSLMT 574
           G  P++ +Y  LI          +GL +  R ++A  +F + + +  C P    Y  ++ 
Sbjct: 349 GCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C+RR+   A  +  Q L                                     N   
Sbjct: 409 SHCKRRQIDKALQIHKQMLEK-----------------------------------NCCN 433

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +  + I + GLC D ++ +A  +   +V+   I    +   L+  +CK G    A+++F 
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             +K G +  P V  Y         +N    AY L  ++
Sbjct: 494 EAVKGGCV--PDVVTYSALITGLVHENMAEEAYLLFTKL 530



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 24/355 (6%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI+ L K    D   + LD + +   +     +  LI G+ K G+ E+A+     M
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +  C+P++  YN++L    R      A  +  EM +    P++V+++  I+GL K+ + 
Sbjct: 276 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 335

Query: 185 EVAIKMLDEMTQRGILPNKFT----------YTIVISGLCQINRADEAYRLFLKMKDSG- 233
           + A  + D M +RG  PN  +          YT+++ GLC+  R DEA  LF K+ D   
Sbjct: 336 KKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 395

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           C PD   YN +L+  CK R++D+AL + +   EK+     + +++ L+ GL    R  +A
Sbjct: 396 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN--CCNVVTWNILVHGLCVDDRLSDA 453

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
                 M +E   PD V YG ++  + + GK   A++L  +  + G VPD   Y+ALI G
Sbjct: 454 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
                + ++A  L  ++ +R  +P+  T           G++    KL NK  KA
Sbjct: 514 LVHENMAEEAYLLFTKLVERRWVPDDKTL----------GLLHRKLKLLNKPRKA 558


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 258/489 (52%), Gaps = 14/489 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L+S   K+     A+ S  K  E     PD Y  + ++N  F+ Q   L  +V  ++
Sbjct: 124 FNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL     IVTF+ LINGL K GK   A+++ D+M  RG  P+  TYT +I+GLC+I   
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF KM ++GC PD V Y+ +++  CK RRV+EAL +    +  G  P + +Y+ L
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 303

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    R+ EA A   +M    I P++V + ++I    + G V +A  +L  M E G+
Sbjct: 304 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 363

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y++L+ G+     + +AR L   +  +   P+  ++ ILI G C+   + +A++
Sbjct: 364 EPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ 423

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LFN+M   G  P +  +N LIDGLC+ G L +A+ LF  M           L+ G   + 
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM-----------LTNGN--LP 470

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   +++ +C  G + KA+++   +  +   P+++ YN LI+  CK  N+  A KLF
Sbjct: 471 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 530

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            EL ++GL+P+   Y T+INGL +    ++A   F  M ++GC P+   Y  ++    + 
Sbjct: 531 SELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQH 590

Query: 580 RKFSLAFSL 588
           +  S A  L
Sbjct: 591 KDESRAVQL 599



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 247/486 (50%), Gaps = 17/486 (3%)

Query: 52  IWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           I  +K+  L   + ++  + ML+    +    DL +  L ++    + +    F  LI+G
Sbjct: 142 ISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLING 201

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
             KVG   +A+E F  M     QPDV+ Y  ++N   +    + A  ++ +M +  C P+
Sbjct: 202 LCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPD 261

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +VT+S +I+ L K  +   A+ +   M  +GI PN FTY  +I GLC  +R  EA  +  
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN 321

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M      P+ V ++ L+N FCK   V EA  +L++  + G  P + +YS L++G     
Sbjct: 322 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
              EA   +  M  +  +PDV  Y ++I G  +A ++ +A +L ++M  +G+ PD   YN
Sbjct: 382 EVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 441

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI G C LG L +A  L   +    +LP+  T++IL+ G C+ G +  A +LF  M+  
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST 501

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P++ M+N LID +CK+  L++A  LF +        LF++  Q   +++      T+
Sbjct: 502 YLKPNMVMYNILIDAMCKSRNLKEARKLFSE--------LFVQGLQPNVQIY-----TTI 548

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C  GL+ +A +    + E G  P+  +YN +I GF +  + + A++L  E++ KG 
Sbjct: 549 INGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608

Query: 528 RPDSVT 533
             D  T
Sbjct: 609 VADVAT 614



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 242/525 (46%), Gaps = 19/525 (3%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA-LALLRSFEKDGFVPRLGSYSC 278
           D+A   F  M      P  + +N LL+   K+R   +A ++L +  E  G  P   +   
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+  F+ +R D  ++   K+ +  ++  +V +  +I GL + GK   A++L  DM  RG
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD + Y  +I G C +G    A  L  ++ +    P+  T++ +I  +C++  V++A 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            +F+ M+  G  P++  +N+LI GLC      +A+ +  +M                N +
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM-------------MSLNIM 329

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  +   ++  +C  G + +A  +L  + E G  P+++TY+SL+NG+     +  A KL
Sbjct: 330 PNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKL 389

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  +  KG +PD  +Y  LING  +  R  +A ++F +M   G TP    Y +L+   C+
Sbjct: 390 FDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             +   A  L+   L +     D    SI  + F ++G +  A +    M        + 
Sbjct: 450 LGRLREAHDLFKNMLTN-GNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 508

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y I +  +C+   +KEA  +FS L              +I+GLCK G LD A++ F   
Sbjct: 509 MYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 568

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            ++G        N ++R  L  KD  +  A  L+  M+  G+  D
Sbjct: 569 EEDGCPPNEFSYNVIIRGFLQHKDESR--AVQLIGEMREKGFVAD 611



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 166/423 (39%), Gaps = 103/423 (24%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL-LFYKMEI-GKNPTLFLRL 451
           +DDA   FN M      P +  FN L+  + K      A + L  +ME+ G +P      
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSP------ 155

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +L  ++  +     +   + +L ++ + G    I+T+N+LING CKVG 
Sbjct: 156 --------DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK 207

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A++LF ++  +G +PD  TY T+INGL ++     A  +F +M + GC P    Y +
Sbjct: 208 FGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267

Query: 572 LMTWSCRRRKFSLA----------------------------FSLWLQYLRDISGRDDES 603
           ++   C+ R+ + A                            FS W    R+ S   +E 
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW----REASAMLNEM 323

Query: 604 MK------------SIEEFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
           M              I  F ++G   E    ++ + EM  + N   +  Y+  + G    
Sbjct: 324 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN---VVTYSSLMNGYSLQ 380

Query: 649 GQVKEALNIFSVLVE-----------------CKAI----------------VTPP--SC 673
            +V EA  +F V++                  CKA                 +TP   S 
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             LI GLC+ G L  A D+F   L NG +  P +C Y +    F K      A+ L   M
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNL--PDLCTYSILLDGFCKQGYLAKAFRLFRAM 498

Query: 734 KSV 736
           +S 
Sbjct: 499 QST 501


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 170/500 (34%), Positives = 252/500 (50%), Gaps = 22/500 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      + Y Y+ ++N   R+    LALAV  +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   PNIVT S L+NG   S +   A+ ++D+M   G  PN  T+  +I GL   N+A 
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD V Y  ++NG CK    D A  LL   E+    P +  Y+ +I
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL + K  D+A   +++M  + I P+VV Y  +I  L   G+  DA +LLSDM ER I 
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD + ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKN---PTLFLRLSQ 453
           F  M    CFP V  ++ LI G CKA  +++   LF +M     +G      TL   L Q
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443

Query: 454 GGN----------RVHDKA-----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            G+           V D       +  T+++  C  G + KA  +   L  S   P I T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN +I G CK G +     LF  L LKG++PD V Y T+I+G  R   +E+A  +F +M 
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

Query: 559 QNGCTPSPAVYKSLMTWSCR 578
           ++G  P+   Y +L+    R
Sbjct: 564 EDGTLPNSGCYNTLIRARLR 583



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 294/595 (49%), Gaps = 57/595 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A++ EMVK    P+I+ FS L++ ++K  K +V I + ++M   G+  N +TY+I+I+
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  P+ V  ++LLNG+C  +R+ EA+AL+      G+ P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M  +  +PD+V YGV++ GL + G    A  LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M +  + P    Y  +I G C    +D A +L  E+  +   PN  T++ LI  +C  
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P V  F+ALID   K G+L +A  L+ +M +   +P++   
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI--- 361

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++  +C    + +A ++   +      PD+++Y++LI GFCK  
Sbjct: 362 -----------VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK 410

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++  ++LF+E+  +GL  ++VTY TLI GL +    + A  IF +M  +G  P+   Y 
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +L+   C+  K   A  ++                   E+LQ+ ++E  I          
Sbjct: 471 TLLDGLCKNGKLEKAMVVF-------------------EYLQRSKMEPTIY--------- 502

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
                  Y I + G+C+ G+V++  ++F  L   K +   P  V    +I G C++G  +
Sbjct: 503 ------TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGV--KPDVVAYNTMISGFCRKGSKE 553

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +F    ++G +      N L+R+ L  +D  +  +  L+  M+S G+  DA
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 606



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 257/551 (46%), Gaps = 61/551 (11%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K +   S    S ++S + K N FD+     +++++  +      + +LI+ + +     
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLP 133

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            AL   GKM +   +P++   +++LN     +    A+A+  +M      PN VTF+ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL    K   A+ ++D M  +G  P+  TY +V++GLC+    D A+ L  KM+     
Sbjct: 194 HGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE 253

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  + Y  +++G CK + +D+AL L +  E  G  P + +YS LI  L    R+ +A   
Sbjct: 254 PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI---------------- 339
              M E KI PDV  +  +I    + GK+ +A KL  +M +R I                
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 340 -------------------VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
                               PD   Y+ LIKGFC    +D+   L  E+ +R  + NT T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +T LI G+ + G  D AQ++F +M   G  P++  +N L+DGLCK G+LEKA ++F  ++
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 441 IGK-NPT----------------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
             K  PT                      LF  LS  G +  D  +  TM+  +C  G  
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK-PDVVAYNTMISGFCRKGSK 552

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A  +  ++ E G LP+   YN+LI    + G+   + +L KE++  G   D+ T G +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612

Query: 538 INGLQ--RVDR 546
            N L   R+D+
Sbjct: 613 TNMLHDGRLDK 623



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D       E+ +  +      +  LIS     G    A      M E
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+ ++A+++   ++   + A  +Y EMVK +  P+IVT+S LING     + + 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M + M  +   P+  +Y+ +I G C+  R DE   LF +M   G   + V Y  L+ 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +    D A  + +    DG  P + +Y+ L+DGL +  + ++A   +  +   K+EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +  Y +MI G+ +AGKV+D   L  ++  +G+ PD   YN +I GFC  G  ++A +L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +  +LPN+  +  LI    R+G  + + +L  +M   G F        L+  +   
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHD 618

Query: 427 GELEKANL 434
           G L+K+ L
Sbjct: 619 GRLDKSFL 626



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 5/231 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I    K    D   +   E+    +   +  +  LI G ++ GDC+ A E F +M
Sbjct: 398 SYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 457

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 P++  YN +L+   +      A+ V+  + +    P I T++++I G+ K+GK 
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E    +   ++ +G+ P+   Y  +ISG C+    +EA  LF +MK+ G  P+   YN L
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577

Query: 245 LNGFCKLRRVD-EALA-LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           +    +LR  D EA A L++     GF     +   L+  +    R D+++
Sbjct: 578 IRA--RLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 191/693 (27%), Positives = 320/693 (46%), Gaps = 76/693 (10%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG----FDLYWQTLDELRS 91
           + + +  +P+   R    A  R+    FA +SAV   +++  G    FDL    + E+R 
Sbjct: 61  AALREQSDPEAALRMLNSALARE---DFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE---FDCQPDVYIYNAVLNIAFRKQL 148
               V + V    +  Y ++   + A++      +   F  Q D  ++N +LN+      
Sbjct: 118 EGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSK 177

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
             L  +VY EM      P++VT + LI  L ++ +   A+ ML+EM+  G+ P++ T+T 
Sbjct: 178 LKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTT 237

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ G  +    + A R+  KM ++GCSP  V  N L+NG+CK+ RV++AL  ++    DG
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           F P   +Y+  + GL +      A      M +E  +PDV  Y  +I  LS+ G++ +A 
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +++ M +RG +PDT  +N LI        L++A  L  E+  +   P+ +TF ILI  +
Sbjct: 358 GIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 417

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA---------------- 432
           C+ G      +LF +M+ +GC P    +N LID LC  G+L  A                
Sbjct: 418 CKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRST 477

Query: 433 -------NLLFYKMEIGKNPTLFLRL-SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
                  + L  KM I +   +F ++ +QG +R     +  T+++  C A  I  A +++
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR--SAVTFNTLIDGLCKAKRIDDATELI 535

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            Q+ + G  P+ ITYNS++  +CK GNI  A  + + +   G   D VTYGTLINGL + 
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKA 595

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R + A ++   M   G  P+P  Y  ++    RR     A +L+               
Sbjct: 596 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF--------------- 640

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLVE 663
               E  + GE  +A+                 Y I    LC+  G +KEA +    +V 
Sbjct: 641 ---REMTEVGEPPDALT----------------YKIVFRSLCRGGGPIKEAFDFLVEMVN 681

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            K  +   S  +++      G L+L MD +L +
Sbjct: 682 -KGFMPEFSSFRML----AEGLLNLGMDDYLIS 709



 Score = 45.8 bits (107), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 14/267 (5%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           LA     P    Y  ++      G  +    L +E++ +G +  +V   + +    R+ R
Sbjct: 80  LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRR 139

Query: 547 EEDAFR-IFGQMPQN--GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR---- 599
            +DA   +  Q+  +  G      V+  L+       K  L  S++     +++GR    
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVY----NEMTGRGIQP 195

Query: 600 DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           D  ++ + I+   +  +V  A+  L EM           +T  + G  ++G ++ AL + 
Sbjct: 196 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVK 255

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           + ++E     T  +   LI+G CK G ++ A+      + +GF       N  +  L   
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGL--C 313

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++    HA  ++  M   G+D D   Y
Sbjct: 314 QNGHVSHALKVMDLMLQEGHDPDVFTY 340


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 174/585 (29%), Positives = 290/585 (49%), Gaps = 27/585 (4%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  L++G  K G    AL     M E    PDV  +N+VL+   ++Q  L A  V+   
Sbjct: 475  TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRA 534

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++  C PN+VT+S LI+GLSK  K + A+++L +M + G   N  TY+ V+ GL ++ R 
Sbjct: 535  LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            ++A  +  +M+D+GC PD V YN L++GF K +R+ EA+ LLR   + GF P + +Y+ L
Sbjct: 595  EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERG 338
              GL R+ R+DEA      M      P+ + Y  ++ GL +AG+V +A+     M R+  
Sbjct: 655  CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714

Query: 339  IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            + P    Y+ALI G C  G +D+A      + +   +P+  TF+ILI G+C  G +D   
Sbjct: 715  VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774

Query: 399  KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPT---LFLRLS 452
            +LF  M + GC   +  +NA+I+  C  GE   A  L  +M+   I KN     + ++  
Sbjct: 775  ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834

Query: 453  QGGNRV--------------HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             G +R+               D+ S  T++     +    +A ++L  +   G  PD   
Sbjct: 835  CGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACN 894

Query: 499  YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            Y ++++G  K G+   A KL +E++ +G  PD  TY  +I+GL +  +   A   F +M 
Sbjct: 895  YMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEML 954

Query: 559  QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEV 616
            +    P   VY SL+   C+  K   A+ L    LR        +M S  ++   +    
Sbjct: 955  RKNLKPDAIVYSSLIDAFCKADKVDDAWKL----LRSSGIEPTITMYSTMVDSLCKNRGT 1010

Query: 617  ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
            + A++ + EM  K  +  +  +T        +G+V EA+ + + L
Sbjct: 1011 DKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 183/663 (27%), Positives = 298/663 (44%), Gaps = 81/663 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F + + G  K G+   A E F  M +    P+   Y+A+++   +     +AL +  + 
Sbjct: 213 TFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDK 272

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              N    +  FS L++GL ++ + E AI++L  M     +PN   +  +++GLCQ  R 
Sbjct: 273 ---NSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRV 326

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---LALLRSFEKDGFVPRLGSY 276
           DEA+ LF  MK+SGCS D + YN LL G CKLRR+ EA   + L+R  E  G  P + ++
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE--GCSPNVVTF 384

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           S LI GL  A R ++A+  Y +M   E I P+   Y  ++ GL +AG  +   +    M 
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444

Query: 336 ERG---------------------IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           ER                        P    YN L+ G    G++  A  L   + +   
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P+  TF  ++ G+C+   + DA  +F +  + GC P+V  ++ LIDGL K  ++++A  
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 564

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L  KM         + L    N V    +  T+V+     G +  A  +L Q+ ++G LP
Sbjct: 565 LLAKM---------VELGCRANTV----TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 611

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D +TYN+LI+GF K   +  A+ L +E+   G  P  VTY TL +GL R  R ++A  I 
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             M   GC P+   Y S++   C+  + + A   + +  RD                   
Sbjct: 672 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD------------------- 712

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
                         ++    +  Y+  + GLC+ G++ EA      ++    I    +  
Sbjct: 713 --------------EVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            LI+GLC  G +D  +++F    + G        N ++ +     +     AY LL  MK
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSA--AYALLEEMK 816

Query: 735 SVG 737
           + G
Sbjct: 817 THG 819



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 270/539 (50%), Gaps = 22/539 (4%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V + MV++ C P +VT++ L+ GLSKSG    A+ +L+ M + G+ P+  T+  V+ GLC
Sbjct: 461 VDFLMVQV-CRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLC 519

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  R  +A+ +F +  + GC P+ V Y+ L++G  K+ ++DEAL LL    + G      
Sbjct: 520 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 579

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +YS ++DGL +  R ++A    R+M +    PD V Y  +I G  +  ++++A+ LL +M
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            E G  P    Y  L  G C  G  D+A  +   +  R   PN  T++ ++ G+C+ G V
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699

Query: 395 DDAQKLFNKMEKAGCF-PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
            +A   F KM +     P V  ++ALIDGLCKAG +++A     +M         +R   
Sbjct: 700 TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM---------IR--- 747

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
              R+ D  +   ++   C AG I    ++   +AE G   DI  YN++IN +C  G  +
Sbjct: 748 -AGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFS 806

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  L +E++  G+  ++VT+G +I  L   DR ++A   F  +P++ C    + Y +L+
Sbjct: 807 AAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED-CRDEIS-YNTLI 864

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDD-ESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           T     R+   A  L    + D    D    M  ++   + G  E A + L EM  + + 
Sbjct: 865 TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLA 689
             L  YTI + GL +  Q+  A + F  ++  +  + P + V   LI   CK   +D A
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEML--RKNLKPDAIVYSSLIDAFCKADKVDDA 981



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 190/718 (26%), Positives = 319/718 (44%), Gaps = 86/718 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G  +  + +K  +   +M    C P+   YN ++N    +     A ++   M
Sbjct: 38  TYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P ++TF L+I GL K G+ E A +++DEM  RG +P+   +T+++  LC++ R 
Sbjct: 98  AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRV 157

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR----------------- 262
           DEA+  F ++   G +PD V YN +++G  K  R++ A  +L+                 
Sbjct: 158 DEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIA 217

Query: 263 ------------------SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK------ 298
                             S  + G  P   +Y  LIDGL +A + D A    R       
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAG 277

Query: 299 MF---------------EEKIE--------PDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           MF               EE I+        P+VV +  ++ GL +A +V +A +L   M+
Sbjct: 278 MFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMK 337

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGM 393
           E G   D   YN L+KG C L  + +A    VE+ +R     PN  TF+ LI G+C  G 
Sbjct: 338 ESGCSADVITYNILLKGLCKLRRIPEAYR-HVELMRRTEGCSPNVVTFSTLIQGLCNAGR 396

Query: 394 VDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-----------EI 441
           V+ A +++ +M    G  P+   +  L++GLCKAG+  +    F +M            I
Sbjct: 397 VNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPI 456

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                 FL +      +    +  T+V     +G++  A  +L  + ESG  PD+IT+NS
Sbjct: 457 HSPEVDFLMVQVCRPTL---VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNS 513

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +++G CK   I  A  +FK    +G RP+ VTY TLI+GL ++ + ++A ++  +M + G
Sbjct: 514 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 573

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENA 619
           C  +   Y +++    +  +   A  + L+ +RD     D    +  I+ F ++  +  A
Sbjct: 574 CRANTVTYSTVVDGLLKVGRMEDAVVV-LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 632

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +  L EM        +  YT    GLC+ G+  EA+ I   +          +   ++ G
Sbjct: 633 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 692

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           LCK G +  A+  F    ++  ++ P V  Y        K  +   AY  L RM   G
Sbjct: 693 LCKAGRVTEALGYFEKMARDE-VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAG 749



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 180/677 (26%), Positives = 304/677 (44%), Gaps = 77/677 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI+G  K G    A  +F K  +F  +P V  Y+ V++   R         +  EM
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C PN VT++ L+N L   G+ + A  +L+ M   G  P   T+ ++I GLC+    
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A+R+  +M D G  PD   +  LL+  C+L RVDEA    +     GF P   +Y+ +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL++A R + A    + + E    P V  + + + GLS+AG +  A +    M + G+
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSL------QVEIWKRDSL------------------ 375
            P+T  Y+ALI G C  G LD A  L      Q  ++   SL                  
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK 302

Query: 376 -----PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                PN   F  L+ G+C+   VD+A +LF+ M+++GC   V  +N L+ GLCK   + 
Sbjct: 303 AMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIP 362

Query: 431 KA--NLLFYKMEIGKNPTL--FLRLSQG---GNRVH-----------------DKASLQT 466
           +A  ++   +   G +P +  F  L QG     RV+                 ++ +   
Sbjct: 363 EAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAF 422

Query: 467 MVEQYCTAGLIHKAYKILMQLAE-----SGNLP----------------DIITYNSLING 505
           ++E  C AG   +  +   Q+ E     S + P                 ++TYN+L+ G
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             K G +  AL L + +   GL PD +T+ ++++GL +  R  DA  +F +  + GC P+
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGL 623
              Y +L+    +  K   A  L L  + ++  R +    S  ++  L+ G +E+A+  L
Sbjct: 543 VVTYSTLIDGLSKMAKMDEALQL-LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL 601

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            +M           Y   + G  +  +++EA+ +   ++E     +  +   L HGLC+ 
Sbjct: 602 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 661

Query: 684 GYLDLAMDVFLYTLKNG 700
           G  D A+++  Y    G
Sbjct: 662 GRFDEAVEILDYMAARG 678



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 167/623 (26%), Positives = 284/623 (45%), Gaps = 54/623 (8%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +VT+++LINGL K+G+   A     +  Q G  P   TY+ VI GLC+ N  D+  +L  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   GC+P+ V YN L+N      R  EA +LL     +G  P L ++  +I GL +  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             + A+    +M +    PDV ++ V++  L E G+V +A      +   G  PD   YN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            ++ G    G L+ A  +   + +  S P   TFTI + G+ + G +  A + F+ M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P+   ++ALIDGLCKAG+L+ A                L L +  N      +  ++
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIA----------------LGLLRDKNSQAGMFAFSSL 284

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C A  + +A ++L  +     +P+++ +NSL+NG C+   ++ A +LF  ++  G 
Sbjct: 285 LHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGC 341

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAF 586
             D +TY  L+ GL ++ R  +A+R    M +  GC+P+   + +L+   C   + + A 
Sbjct: 342 SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA- 400

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKG--------EVENAIQGLLEMDFKLN------- 631
             W  Y R ++       +    FL +G         +E   + +LE +++ +       
Sbjct: 401 --WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHS 458

Query: 632 ---DF--------QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
              DF         L  Y   + GL + G V++AL +   ++E        +   ++ GL
Sbjct: 459 PEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDL 740
           CK   +  A +VF   L+ G   RP V  Y       SK  K   A  LL +M  +G   
Sbjct: 519 CKEQRILDAHNVFKRALERG--CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 576

Query: 741 DACLYPKTKSLLPGPWNTREMEN 763
           +   Y    +++ G      ME+
Sbjct: 577 NTVTY---STVVDGLLKVGRMED 596



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 255/561 (45%), Gaps = 27/561 (4%)

Query: 18   IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
            IE  L P    ++  +V   + K +        F  A +R    +  + S +I  L K  
Sbjct: 500  IESGLSP--DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 78   GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
              D   Q L ++        +  +  ++ G  KVG  E A+    +M++  C PD   YN
Sbjct: 558  KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617

Query: 138  AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             +++  F++Q    A+ +  EM++    P++VT++ L +GL +SG+ + A+++LD M  R
Sbjct: 618  TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR 677

Query: 198  GILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G  PN  TY+ ++ GLC+  R  EA   F KM +D   +P  +AY+AL++G CK  R+DE
Sbjct: 678  GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDE 737

Query: 257  ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
            A   L    + G +P + ++S LI+GL  A R D     +  M E   + D+  Y  MI 
Sbjct: 738  AYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797

Query: 317  GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK--RDS 374
                 G+   A  LL +M+  GI  +T  +  +IK  C    +D+A S    I +  RD 
Sbjct: 798  AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE 857

Query: 375  LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            +    ++  LI  +  +   + A +L   M   G  P    +  ++DGL KAG  E A  
Sbjct: 858  I----SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAK 913

Query: 435  LFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            L  +M   G +P              D  +   M+     A  +  A     ++      
Sbjct: 914  LLQEMRSRGHSP--------------DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 494  PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            PD I Y+SLI+ FCK   ++ A KL +     G+ P    Y T+++ L +    + A  +
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 554  FGQMPQNGCTPSPAVYKSLMT 574
              +M    C P   ++ SL T
Sbjct: 1017 IREMKSKNCEPGIHIWTSLAT 1037



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 7/340 (2%)

Query: 67   SAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
            SA+I  L K    D  ++ L+ + R+G +  V   F +LI+G    G  +  LE F  M 
Sbjct: 723  SALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV-TFSILINGLCDAGRIDTGLELFCGMA 781

Query: 126  EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
            E  C+ D+Y YNA++N    K  F  A A+  EM       N VT  ++I  L  + + +
Sbjct: 782  ERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRID 841

Query: 186  VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
             A+     + +     ++ +Y  +I+ L    R+++A  L   M   G SPD   Y  ++
Sbjct: 842  EAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 246  NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
            +G  K    + A  LL+     G  P L +Y+ +I GL +AK+   A  ++ +M  + ++
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 306  PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            PD ++Y  +I    +A KV DA KLL   R  GI P    Y+ ++   C     D+A  +
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDAWKLL---RSSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 366  QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
              E+  ++  P  H +T L       G VD+A KL N ++
Sbjct: 1017 IREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 5/290 (1%)

Query: 46   VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
             G   F   A+R       + +A+I+       F   +  L+E+++  ++  +    ++I
Sbjct: 772  TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVI 831

Query: 106  SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
                     ++A+  F  + E DC+ ++  YN ++      +    AL +   MV     
Sbjct: 832  KALCGNDRIDEAVSYFHSIPE-DCRDEIS-YNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 166  PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
            P+   +  +++GL K+G  EVA K+L EM  RG  P+  TYTI+ISGL +  +   A   
Sbjct: 890  PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 226  FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
            F +M      PD + Y++L++ FCK  +VD+A  LLRS    G  P +  YS ++D L +
Sbjct: 950  FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCK 1006

Query: 286  AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
             +  D+A    R+M  +  EP + ++  +       G+V +A+KL++D++
Sbjct: 1007 NRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 169/592 (28%), Positives = 289/592 (48%), Gaps = 41/592 (6%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAVY 156
           S VF +++     +   EKAL      K     P V  YNA+L+   R ++  + A  VY
Sbjct: 132 SAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVY 191

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM+      N+ ++++LI G   +G  E+ ++  +EM +   LPN  TY  VI   C++
Sbjct: 192 REMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R DEA++L   M   G  P+ + YN ++NG C++ R++E   +L   ++ GF P   +Y
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + L++G  +   + +A   + +M    + PDVV Y  +I  + +AG +  AM+    M  
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG+ P+   Y +LI GF   G +D+A  +  E+ +    P   T+  L+ G C +G +++
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A  L   ME  G  P V  ++ +I G C+  EL++A  +  +M E G +P          
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSP---------- 481

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  ++++  C    +++A  +  ++     LPD  TY SLING+CK G++N A
Sbjct: 482 ----DAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L L  E+  KG  PD+VTY  LINGL +  R  +A R+  ++  +   P+   Y +L+  
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE- 596

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG---EVENAIQGLLEMDFKLND 632
           SC   +F    +L                  I+ F  KG   E +   + +++ + K N+
Sbjct: 597 SCSDIEFKSVVAL------------------IKGFCMKGLMNEADQVFESMIKRNQKPNE 638

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
              A Y + + G C+DG V +A  ++  +V+   I    + + L+  L   G
Sbjct: 639 ---AVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG 687



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 270/553 (48%), Gaps = 33/553 (5%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           N ++G RFF    + + L +  + + VI    K    D  ++ L  +    +      + 
Sbjct: 218 NLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYN 277

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++I+G  +VG  E+      +M      PD   YN ++N   +   F  AL ++ EM++ 
Sbjct: 278 MVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN 337

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT++ LIN + K+G    A++  D+M  RG+ PN  TYT +I+G  Q    DEA
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           YR++ +M  SG  P  V YNALLNG C   R++EA+ LLR  E  G  P + SYS +I G
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R +  D A+    +M E+ + PD + Y  +I+GL E  ++ +A  L  +M  + ++PD
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + Y +LI G+C  G L++A +L  E+ K+  LP+T T+ +LI G+ +     +A++L  
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           K+      P+   ++ LI+  C   E +                                
Sbjct: 578 KLFYDESIPNGITYDTLIES-CSDIEFK-------------------------------- 604

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S+  +++ +C  GL+++A ++   + +    P+   YN +I+G C+ GN++ A KL+KE+
Sbjct: 605 SVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEM 664

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              G  P +VT   L+  L     +E    +   + ++       + K+L+  + +    
Sbjct: 665 VDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNI 724

Query: 583 SLAFSLWLQYLRD 595
              F+L  +  +D
Sbjct: 725 DAVFNLLTEMAKD 737



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 261/564 (46%), Gaps = 44/564 (7%)

Query: 217 NRADEAYRLFLK-MKDS--GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           N  DE    F + +KD+   C+     ++ ++     L  +++AL ++   + +GF+P +
Sbjct: 108 NSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGV 167

Query: 274 GSYSCLIDGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
            SY+ ++D + R ++    A   YR+M    +  +V  Y ++IRG   AG ++  ++   
Sbjct: 168 LSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFE 227

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M     +P+   YN +I  +C L  +D+A  L   +      PN  T+ ++I G+CR G
Sbjct: 228 EMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVG 287

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNP 445
            +++   +  +M++ G  P    +N L++G CK G   +A +L  +M       ++    
Sbjct: 288 RIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYT 347

Query: 446 TLFLRLSQGGN---------RVH------DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +L   + + GN         ++H      +  +  +++  +   G + +AY+I  ++  S
Sbjct: 348 SLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS 407

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P I+TYN+L+NG C  G +  A+ L + ++ KGL PD V+Y T+I G  R    + A
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRA 467

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEE 609
           F++  +M + G +P    Y SL+   C +R+ + A  L+ + L      D+ +  S I  
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI------------ 657
           + ++G++  A+    EM  K        Y + + GL +  + +EA  +            
Sbjct: 528 YCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPN 587

Query: 658 ---FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
              +  L+E  + +   S V LI G C +G ++ A  VF   +K        V N ++  
Sbjct: 588 GITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHG 647

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGY 738
               +D     A+ L   M   G+
Sbjct: 648 --HCRDGNVHKAHKLYKEMVDFGF 669


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/502 (31%), Positives = 258/502 (51%), Gaps = 29/502 (5%)

Query: 101 FFVLISGYYKVGDCEKALESF-GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           + +++    + GD  +ALE F G+M      P +  YN ++N   +       + ++ E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P++VT++ LI+ L K+G  E A ++  +M+ RG +PN  TY+++I+GLC++ R 
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 220 DEAYRLFLKMKDSGCS--PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV---PRLG 274
           DEA  L  +M    C   P+ + YN+ L+G CK     EA  L+RS  +DG +   P   
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSPDTV 182

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           ++S LIDGL +  + DEA + +  M      P+V+ Y  ++ GL +A K++ A  ++  M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT-----HTFTILICGMC 389
            ++G+ PD   Y+ L+  FC    +D+A  L   +  R   PN       TF ILI G C
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLF 448
           + G  + A  LF +M      P V  F ALIDGLCKAG++E A ++L     +G  P + 
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                         +   +V   C +G I +A + L ++  SG +PD ITY SL+   C+
Sbjct: 363 --------------TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
               + AL+L  EL+  G  PD+VTY  L++GL +  + E A  +  +M   G  P    
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468

Query: 569 YKSLMTWSCRRRKFSLAFSLWL 590
           + +   +S   R  +LA ++ L
Sbjct: 469 FAA--CFSGLHRSGNLAGTMEL 488



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 255/491 (51%), Gaps = 22/491 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G  K  D    +E F ++ E    PDV  YN +++   +      A  ++ +M 
Sbjct: 40  YNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 99

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINR 218
              C+PN+VT+S+LINGL K G+ + A +++ EMT++   +LPN  TY   + GLC+ + 
Sbjct: 100 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 159

Query: 219 ADEAYRLFLKMKDSG--CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             EA  L   ++D     SPD V ++ L++G CK  ++DEA ++       G+VP + +Y
Sbjct: 160 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY 219

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + L++GL +A + + A+A    M ++ + PDV+ Y V++    +A +V +A++LL  M  
Sbjct: 220 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMAS 279

Query: 337 RG-----IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           RG     +VPD   +N LI G C  G  +QA +L  E+  ++  P+  TF  LI G+C+ 
Sbjct: 280 RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 339

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G V+ A+ + + M   G  P+V  +NAL+ GLCK+G +E+A     +M           +
Sbjct: 340 GQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM-----------V 388

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S G   V D  +  ++V   C A     A +++ +L   G  PD +TYN L++G  K G 
Sbjct: 389 SSGC--VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A+ + +E+  KG +PDS T+    +GL R         +   +   G  P      S
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506

Query: 572 LMTWSCRRRKF 582
           ++ W CR  K 
Sbjct: 507 ILDWVCRSGKL 517



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 271/565 (47%), Gaps = 57/565 (10%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           V  YN VL    R      AL ++  EM +    P IVT++ +INGL KS      +++ 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           +E+ +RG  P+  TY  +I  LC+    +EA RL   M   GC P+ V Y+ L+NG CK+
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 252 RRVDEALALLRSFEKDG--FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE--KIEPD 307
            R+DEA  L++   +     +P + +Y+  +DGL +     EA    R + +   ++ PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V +  +I GL + G++ +A  +  DM   G VP+   YNAL+ G C    +++A ++  
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM-----FNALIDG 422
            +  +   P+  T+++L+   C+   VD+A +L + M   GC P+V +     FN LI G
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            CKAG  E+A+ LF +M + KN               D  +   +++  C AG +  A  
Sbjct: 301 ACKAGNFEQASALFEEM-VAKNLQ------------PDVMTFGALIDGLCKAGQVEAARD 347

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           IL  +   G  P+++TYN+L++G CK G I  A +  +E+   G  PDS+TYG+L+  L 
Sbjct: 348 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 407

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           R  R +DA ++  ++   G  P    Y  L+              LW       SG+ ++
Sbjct: 408 RASRTDDALQLVSELKSFGWDPDTVTYNILVD------------GLWK------SGKTEQ 449

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           ++  +EE + KG   ++                  +     GL + G +   + +  V++
Sbjct: 450 AITVLEEMVGKGHQPDSFT----------------FAACFSGLHRSGNLAGTMELLRVVL 493

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLD 687
               +    +C  ++  +C+ G LD
Sbjct: 494 AKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 231/483 (47%), Gaps = 30/483 (6%)

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYR-KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           +  Y+ ++  L RA     A   +R +M  + + P +V Y  +I GL ++  +   M+L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            ++ ERG  PD   YN LI   C  G L++AR L  ++  R  +PN  T+++LI G+C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 392 GMVDDAQKLFNKMEKAGC--FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           G +D+A++L  +M +  C   P++  +N+ +DGLCK     +A  L   +  G      L
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS-----L 175

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R+S       D  +  T+++  C  G I +A  +   +   G +P++ITYN+L+NG CK 
Sbjct: 176 RVSP------DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV- 568
             +  A  + + +  KG+ PD +TY  L++   +  R ++A  +   M   GCTP+  V 
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 569 ----YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL 623
               +  L+  +C+   F  A +L+ + +      D  +  + I+   + G+VE A + +
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE-AARDI 348

Query: 624 LEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           L++   + +  + P    Y   + GLC+ G+++EA      +V    +    +   L++ 
Sbjct: 349 LDL---MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           LC+    D A+   +  LK+ F   P    Y +      K  K   A  +L  M   G+ 
Sbjct: 406 LCRASRTDDALQ-LVSELKS-FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 463

Query: 740 LDA 742
            D+
Sbjct: 464 PDS 466



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 181/359 (50%), Gaps = 7/359 (1%)

Query: 89  LRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           LR G++ V  D   F  LI G  K G  ++A   F  M      P+V  YNA++N   + 
Sbjct: 170 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 229

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN---- 202
                A A+   MV     P+++T+S+L++   K+ + + A+++L  M  RG  PN    
Sbjct: 230 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP 289

Query: 203 -KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
            K T+ I+I+G C+    ++A  LF +M      PD + + AL++G CK  +V+ A  +L
Sbjct: 290 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
                 G  P + +Y+ L+ GL ++ R +EA  +  +M      PD + YG ++  L  A
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            +  DA++L+S+++  G  PDT  YN L+ G    G  +QA ++  E+  +   P++ TF
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                G+ R+G +    +L   +   G  P     ++++D +C++G+L+    +  + E
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 5/344 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K    D      D++ +G        +  L++G  K    E+A      M +
Sbjct: 185 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI-----VTFSLLINGLSKS 181
               PDV  Y+ +++   +      AL + + M    C PN+     VTF++LI G  K+
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E A  + +EM  + + P+  T+  +I GLC+  + + A  +   M + G  P+ V Y
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NAL++G CK  R++EA   L      G VP   +Y  L+  L RA R D+A     ++  
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 424

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              +PD V Y +++ GL ++GK + A+ +L +M  +G  PD++ + A   G    G L  
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAG 484

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
              L   +  +  LP+  T + ++  +CR+G +DD + +  + E
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 170/500 (34%), Positives = 251/500 (50%), Gaps = 22/500 (4%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            F  L+S   K+   +  +    +M+      + Y Y+ ++N   R+    LALAV  +M+
Sbjct: 698  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            KL   PNIVT S L+NG   S +   A+ ++D+M   G  PN  T+  +I GL   N+A 
Sbjct: 758  KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817

Query: 221  EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            EA  L  +M   GC PD V Y  ++NG CK    D A  LL   E+    P +  Y+ +I
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 281  DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            DGL + K  D+A   +++M  + I P+VV Y  +I  L   G+  DA +LLSDM ER I 
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 341  PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            PD + ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+++
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 401  FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPT---LFLRLSQ 453
            F  M    CFP V  +N LI G CK   +E+   +F +M     +G   T   L   L Q
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 454  GGN----------RVHDKA-----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             G+           V D       +  T+++  C  G + KA  +   L  S   P I T
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117

Query: 499  YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            YN +I G CK G +     LF  L LKG++PD V Y T+I+G  R   +E+A  +F +M 
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177

Query: 559  QNGCTPSPAVYKSLMTWSCR 578
            ++G  P+   Y +L+    R
Sbjct: 1178 EDGTLPNSGCYNTLIRARLR 1197



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 293/595 (49%), Gaps = 57/595 (9%)

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            A+A++ EMVK    P+I+ FS L++ ++K  K +V I + ++M   GI  N +TY+I+I+
Sbjct: 679  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 738

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              C+ ++   A  +  KM   G  P+ V  ++LLNG+C  +R+ EA+AL+      G+ P
Sbjct: 739  CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               +++ LI GLF   +  EA A   +M  +  +PD+V YGV++ GL + G    A  LL
Sbjct: 799  NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 858

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            + M +  + P    YN +I G C    +D A +L  E+  +   PN  T++ LI  +C  
Sbjct: 859  NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 918

Query: 392  GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
            G   DA +L + M +    P V  F+ALID   K G+L +A  L+ +M +   +P++   
Sbjct: 919  GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI--- 975

Query: 451  LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                        +  +++  +C    + +A ++   +      PD++TYN+LI GFCK  
Sbjct: 976  -----------VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024

Query: 511  NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
             +   +++F+E+  +GL  ++VTY  LI GL +    + A  IF +M  +G  P+   Y 
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084

Query: 571  SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            +L+   C+  K   A  ++                   E+LQ+ ++E  I          
Sbjct: 1085 TLLDGLCKNGKLEKAMVVF-------------------EYLQRSKMEPTIY--------- 1116

Query: 631  NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
                   Y I + G+C+ G+V++  ++F  L   K +   P  V    +I G C++G  +
Sbjct: 1117 ------TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGV--KPDVVAYNTMISGFCRKGSKE 1167

Query: 688  LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
             A  +F    ++G +      N L+R+ L  +D  +  +  L+  M+S G+  DA
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 1220



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV F+ L++ + K  K +V I +  +M   GI  + +T+ IVI+
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C   +   A  +  KM   G  PD V   +L+NGFC+  RV +A++L+    + G+ P
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +ID L + KR ++A+ +++++  + I P+VV Y  ++ GL  + +  DA +LL
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM ++ I P+   Y+AL+  F   G + +A+ L  E+ +    P+  T++ LI G+C +
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A ++F+ M   GC   V  +N LI+G CKA  +E    LF +M            
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM------------ 459

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V +  +  T+++ +  AG + KA +   Q+   G  PDI TYN L+ G C  G 
Sbjct: 460 SQRG-LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL +F+++Q + +  D VTY T+I G+ +  + E+A+ +F  +   G  P    Y +
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 572 LMTWSCRR 579
           +M+  C +
Sbjct: 579 MMSGLCTK 586



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/651 (25%), Positives = 295/651 (45%), Gaps = 50/651 (7%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++G+ +      A+    KM E   +PD+  YNA+++   + +    A   + E+ +  
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT++ L+NGL  S +   A ++L +M ++ I PN  TY+ ++    +  +  EA 
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 383

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M      PD V Y++L+NG C   R+DEA  +       G +  + SY+ LI+G 
Sbjct: 384 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 443

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +AKR ++    +R+M +  +  + V Y  +I+G  +AG V  A +  S M   GI PD 
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + YN L+ G CD G L++A  +  ++ KR+   +  T+T +I GMC+ G V++A  LF  
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----------------------- 440
           +   G  P +  +  ++ GLC  G L +   L+ KM+                       
Sbjct: 564 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELI 623

Query: 441 -----IGKNPTLFLRLSQGGN-------RVHDKASLQTMVEQYCTAGL----IHKAYKIL 484
                 G  P+L   +  G         R     +     E+    GL    +  A  + 
Sbjct: 624 KKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALF 683

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ +S   P II ++ L++   K+   +  + L +++Q  G+  +  TY  LIN   R 
Sbjct: 684 GEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR 743

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +   A  + G+M + G  P+     SL+   C  ++ S A +L  Q    ++G    ++
Sbjct: 744 SQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF--VTGYQPNTV 801

Query: 605 KS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                I       +   A+  +  M  K     L  Y + + GLC+ G    A N+ + +
Sbjct: 802 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 662 VECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            + K  + P   +   +I GLCK  ++D A+++F      G  +RP V  Y
Sbjct: 862 EQGK--LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG--IRPNVVTY 908



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 259/557 (46%), Gaps = 61/557 (10%)

Query: 50   FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
             F    K +   S    S ++S + K N FD+     +++++  +      + +LI+ + 
Sbjct: 682  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 741

Query: 110  KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
            +      AL   GKM +   +P++   +++LN     +    A+A+  +M      PN V
Sbjct: 742  RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 801

Query: 170  TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            TF+ LI+GL    K   A+ ++D M  +G  P+  TY +V++GLC+    D A+ L  KM
Sbjct: 802  TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 861

Query: 230  KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
            +     P  + YN +++G CK + +D+AL L +  E  G  P + +YS LI  L    R+
Sbjct: 862  EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921

Query: 290  DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI---------- 339
             +A      M E KI PDV  +  +I    + GK+ +A KL  +M +R I          
Sbjct: 922  SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981

Query: 340  -------------------------VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
                                      PD   YN LIKGFC    +++   +  E+ +R  
Sbjct: 982  INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 1041

Query: 375  LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            + NT T+ ILI G+ + G  D AQ++F +M   G  P++  +N L+DGLCK G+LEKA +
Sbjct: 1042 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 1101

Query: 435  LFYKMEIGK-NPT----------------------LFLRLSQGGNRVHDKASLQTMVEQY 471
            +F  ++  K  PT                      LF  LS  G +  D  +  TM+  +
Sbjct: 1102 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK-PDVVAYNTMISGF 1160

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
            C  G   +A  +  ++ E G LP+   YN+LI    + G+   + +L KE++  G   D+
Sbjct: 1161 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 1220

Query: 532  VTYGTLINGLQ--RVDR 546
             T G + N L   R+D+
Sbjct: 1221 STIGLVTNMLHDGRLDK 1237



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 170/684 (24%), Positives = 309/684 (45%), Gaps = 72/684 (10%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++ F  M +    P +  +N +L+   + + + + +++  +M  L    ++ TF+++IN
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                 +  +A+ +L +M + G  P++ T   +++G C+ NR  +A  L  KM + G  P
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D VAYNA+++  CK +RV++A    +  E+ G  P + +Y+ L++GL  + R+ +A    
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M ++KI P+V+ Y  ++    + GKV +A +L  +M    I PD   Y++LI G C  
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 411

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D+A  +   +  +  L +  ++  LI G C+   V+D  KLF +M + G   +   +
Sbjct: 412 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 471

Query: 417 NALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N LI G  +AG+++KA   F +M+  G +P ++              +   ++   C  G
Sbjct: 472 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW--------------TYNILLGGLCDNG 517

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + KA  I   + +     DI+TY ++I G CK G +  A  LF  L LKGL+PD VTY 
Sbjct: 518 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG-------------------------CTPSPAVYK 570
           T+++GL       +   ++ +M Q G                         C  +P++ K
Sbjct: 578 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 637

Query: 571 SLMTWSCRRRKFSL--AFSLWLQY-LRDISGRD-------DESMKSIEEFLQKGEVENAI 620
            + +  C ++  SL  AFS    Y  R+   R+       D+++    E ++     + I
Sbjct: 638 DIKSGVC-KKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSII 696

Query: 621 Q--GLLEMDFKLNDFQLA-----------------PYTIWLIGLCQDGQVKEALNIFSVL 661
           +   LL    K+N F +                   Y+I +   C+  Q+  AL +   +
Sbjct: 697 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 756

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
           ++        +   L++G C    +  A+ +       G+       N L+  L     N
Sbjct: 757 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH--N 814

Query: 722 KKVHAYHLLCRMKSVGYDLDACLY 745
           K   A  L+ RM + G   D   Y
Sbjct: 815 KASEAMALIDRMVAKGCQPDLVTY 838



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 166/700 (23%), Positives = 309/700 (44%), Gaps = 74/700 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    +  +    E+    +      +  L++G         A      M +
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y+A+L+   +    L A  ++ EMV+++  P+IVT+S LINGL    + + 
Sbjct: 357 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M D M  +G L +  +Y  +I+G C+  R ++  +LF +M   G   + V YN L+ 
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 476

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF +   VD+A       +  G  P + +Y+ L+ GL      ++A   +  M + +++ 
Sbjct: 477 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 536

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  +IRG+ + GKV++A  L   +  +G+ PD   Y  ++ G C  GLL +  +L 
Sbjct: 537 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 596

Query: 367 VEIWKRDSLPNTHTFT-------------ILICG-------------------------- 387
            ++ +   + N  T +             +L CG                          
Sbjct: 597 TKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSG 656

Query: 388 ---------MCRNGM----VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
                    + RNG+    +DDA  LF +M K+  FPS+  F+ L+  + K  + +    
Sbjct: 657 KTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS 716

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L  +M+    P             H+  +   ++  +C    +  A  +L ++ + G  P
Sbjct: 717 LGEQMQNLGIP-------------HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP 763

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +I+T +SL+NG+C    I+ A+ L  ++ + G +P++VT+ TLI+GL   ++  +A  + 
Sbjct: 764 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 823

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM----KSIEEF 610
            +M   GC P    Y  ++   C+R    LAF+L  +  +   G+ +  +      I+  
Sbjct: 824 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ---GKLEPGVLIYNTIIDGL 880

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +   +++A+    EM+ K     +  Y+  +  LC  G+  +A  + S ++E K     
Sbjct: 881 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 940

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            +   LI    K G L  A  ++   +K    + P +  Y
Sbjct: 941 FTFSALIDAFVKEGKLVEAEKLYDEMVKRS--IDPSIVTY 978



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + +I  L K    D       E+ +  +      +  LIS     G    A      M E
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                PDV+ ++A+++   ++   + A  +Y EMVK +  P+IVT+S LING     + + 
Sbjct: 934  RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A +M + M  +   P+  TY  +I G C+  R +E   +F +M   G   + V YN L+ 
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G  +    D A  + +    DG  P + +Y+ L+DGL +  + ++A   +  +   K+EP
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             +  Y +MI G+ +AGKV+D   L  ++  +G+ PD   YN +I GFC  G  ++A +L 
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             E+ +  +LPN+  +  LI    R+G  + + +L  +M   G F        L+  +   
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHD 1232

Query: 427  GELEKANL 434
            G L+K+ L
Sbjct: 1233 GRLDKSFL 1240



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 56/360 (15%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
           R+  ++DA  LF+ M K+  FPS+  FN L+  + K  + +    L  KME+ G    L+
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 449 ----------------LRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
                           L LS  G  +      D+ ++ ++V  +C    +  A  ++ ++
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PDI+ YN++I+  CK   +N A   FKE++ KG+RP+ VTY  L+NGL    R 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            DA R+   M +   TP+   Y +L+                                  
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALL---------------------------------- 370

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + F++ G+V  A +   EM     D  +  Y+  + GLC   ++ EA  +F ++V    +
Sbjct: 371 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 430

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               S   LI+G CK   ++  M +F    + G +      N L++    + D  K   +
Sbjct: 431 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 490



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 40/256 (15%)

Query: 40   KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
            K K  + G   F   ++R  + +  + + +I  L +    D+  +   E+ S  V     
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  L+ G  K G  EKA+  F  ++    +P +Y YN                      
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN---------------------- 1119

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                         ++I G+ K+GK E    +   ++ +G+ P+   Y  +ISG C+    
Sbjct: 1120 -------------IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 1166

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD-EALA-LLRSFEKDGFVPRLGSYS 277
            +EA  LF +MK+ G  P+   YN L+    +LR  D EA A L++     GF     +  
Sbjct: 1167 EEADALFKEMKEDGTLPNSGCYNTLIRA--RLRDGDREASAELIKEMRSCGFAGDASTIG 1224

Query: 278  CLIDGLFRAKRYDEAY 293
             L+  +    R D+++
Sbjct: 1225 -LVTNMLHDGRLDKSF 1239


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 170/500 (34%), Positives = 251/500 (50%), Gaps = 22/500 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      + Y Y+ ++N   R+    LALAV  +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   PNIVT S L+NG   S +   A+ ++D+M   G  PN  T+  +I GL   N+A 
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD V Y  ++NG CK    D A  LL   E+    P +  Y+ +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL + K  D+A   +++M  + I P+VV Y  +I  L   G+  DA +LLSDM ER I 
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD + ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPT---LFLRLSQ 453
           F  M    CFP V  +N LI G CK   +E+   +F +M     +G   T   L   L Q
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443

Query: 454 GGN----------RVHDKA-----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            G+           V D       +  T+++  C  G + KA  +   L  S   P I T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN +I G CK G +     LF  L LKG++PD V Y T+I+G  R   +E+A  +F +M 
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563

Query: 559 QNGCTPSPAVYKSLMTWSCR 578
           ++G  P+   Y +L+    R
Sbjct: 564 EDGTLPNSGCYNTLIRARLR 583



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 293/595 (49%), Gaps = 57/595 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A++ EMVK    P+I+ FS L++ ++K  K +V I + ++M   GI  N +TY+I+I+
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  P+ V  ++LLNG+C  +R+ EA+AL+      G+ P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M  +  +PD+V YGV++ GL + G    A  LL
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M +  + P    YN +I G C    +D A +L  E+  +   PN  T++ LI  +C  
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P V  F+ALID   K G+L +A  L+ +M +   +P++   
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI--- 361

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++  +C    + +A ++   +      PD++TYN+LI GFCK  
Sbjct: 362 -----------VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +   +++F+E+  +GL  ++VTY  LI GL +    + A  IF +M  +G  P+   Y 
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +L+   C+  K   A  ++                   E+LQ+ ++E  I          
Sbjct: 471 TLLDGLCKNGKLEKAMVVF-------------------EYLQRSKMEPTIY--------- 502

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
                  Y I + G+C+ G+V++  ++F  L   K +   P  V    +I G C++G  +
Sbjct: 503 ------TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGV--KPDVVAYNTMISGFCRKGSKE 553

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +F    ++G +      N L+R+ L  +D  +  +  L+  M+S G+  DA
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMRSCGFAGDA 606



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 258/551 (46%), Gaps = 61/551 (11%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K +   S    S ++S + K N FD+     +++++  +      + +LI+ + +     
Sbjct: 74  KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLP 133

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            AL   GKM +   +P++   +++LN     +    A+A+  +M      PN VTF+ LI
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL    K   A+ ++D M  +G  P+  TY +V++GLC+    D A+ L  KM+     
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  + YN +++G CK + +D+AL L +  E  G  P + +YS LI  L    R+ +A   
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI---------------- 339
              M E KI PDV  +  +I    + GK+ +A KL  +M +R I                
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373

Query: 340 -------------------VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
                               PD   YN LIKGFC    +++   +  E+ +R  + NT T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + ILI G+ + G  D AQ++F +M   G  P++  +N L+DGLCK G+LEKA ++F  ++
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493

Query: 441 IGK-NPT----------------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
             K  PT                      LF  LS  G +  D  +  TM+  +C  G  
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK-PDVVAYNTMISGFCRKGSK 552

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A  +  ++ E G LP+   YN+LI    + G+   + +L KE++  G   D+ T G +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612

Query: 538 INGLQ--RVDR 546
            N L   R+D+
Sbjct: 613 TNMLHDGRLDK 623



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D       E+ +  +      +  LIS     G    A      M E
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+ ++A+++   ++   + A  +Y EMVK +  P+IVT+S LING     + + 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M + M  +   P+  TY  +I G C+  R +E   +F +M   G   + V YN L+ 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +    D A  + +    DG  P + +Y+ L+DGL +  + ++A   +  +   K+EP
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +  Y +MI G+ +AGKV+D   L  ++  +G+ PD   YN +I GFC  G  ++A +L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +  +LPN+  +  LI    R+G  + + +L  +M   G F        L+  +   
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHD 618

Query: 427 GELEKANL 434
           G L+K+ L
Sbjct: 619 GRLDKSFL 626



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   E+ S  V     
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G  K G  EKA+  F  ++    +P +Y YN                      
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN---------------------- 505

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ P+   Y  +ISG C+    
Sbjct: 506 -------------IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD-EALA-LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  P+   YN L+    +LR  D EA A L++     GF     +  
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA--RLRDGDREASAELIKEMRSCGFAGDASTIG 610

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 611 -LVTNMLHDGRLDKSF 625


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 262/498 (52%), Gaps = 27/498 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+ G  +    EKA +  G+MKE  C PD  IYNA+++   + + F  A     EM
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK +CLP +VT++ +++GL K+G+T+ A+K+LDEM  +G  PN +TY +++ GLC+  + 
Sbjct: 72  VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKL 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++  +M   G  PD V YN+ + G CK  RVDEA   L         P + SY+ +
Sbjct: 132 DEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTV 188

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL ++   D A     +M      PDVV Y  +I G  + G+V+ AM LL  M + G 
Sbjct: 189 INGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN+L+     LG + +A  + VE+ +R   P+  ++   I G+C+   V  A+ 
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGEL-------EKANLLFYKMEIGKNPTLFLRLS 452
           +F++M + GC P+   ++ L++ LCK  EL       E+A   +  ++I     L   L 
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLC 368

Query: 453 QGG---------NRVHDKASLQ-------TMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +GG         ++V D+   +        M++ +C    I KA +I  Q+ E  N  ++
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER-NCCNV 427

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +T+N L++G C    ++ A  +   +  +G  PD VTYGTL++ + +  +   A  +F +
Sbjct: 428 VTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEE 487

Query: 557 MPQNGCTPSPAVYKSLMT 574
             + GC P    Y +L+T
Sbjct: 488 AVKGGCVPDVVTYSALIT 505



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 280/627 (44%), Gaps = 62/627 (9%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M +  CQPD + +  +L    R      A  +   M ++ C+P+   ++ LI+G SK+  
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A K L EM +   LP   TYT ++ GLC+  R  +A +L  +M+D GCSP+   YN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           ++ G C+ R++DEA  +L      G+ P + +Y+  I GL +  R DEA  +  +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PDVV Y  +I GL ++G +  A ++L  M  RG  PD   Y++LI GFC  G +++A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L   + K    PN   +  L+  + R G +  A+ +  +ME+ G  P V  +NA IDGL
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CKA  ++KA  +F +M E G  P              + +S   +VE+ C    +  A  
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTP--------------NASSYSMLVEELCKKKELDDAIT 343

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF-KELQLKGLRPD----------- 530
           ++ Q  E   + DI+ Y  L++G CK G  + A  LF K L  K   PD           
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403

Query: 531 -----------------------SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
                                   VT+  L++GL   DR  DA  +   M   G  P   
Sbjct: 404 CKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFV 463

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            Y +L+   C+  K + A  L+ + ++     D  +  + I   + +   E A     ++
Sbjct: 464 TYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 523

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG-LCKRGY 685
           D  L       +   ++G  ++G     L +F  L+E        +  K I G L K   
Sbjct: 524 DVAL-------WNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAES 576

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L  A  +F   +K GF     V N L+
Sbjct: 577 LGKARGLFDRAVKGGFFPDLFVANTLI 603



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 284/597 (47%), Gaps = 31/597 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+IS   K   F   ++ L E+   +       +  ++ G  K G  + A++   +M++
Sbjct: 49  NALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRD 108

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P++Y YN ++     ++    A  +  EM      P++VT++  I GL K  + + 
Sbjct: 109 KGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDE 168

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K L  M    + P+  +YT VI+GLC+    D A R+  +M + GC+PD V Y++L++
Sbjct: 169 ARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID 225

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCK   V+ A+ LL S  K G  P + +Y+ L+  L R     +A     +M      P
Sbjct: 226 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 285

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV Y   I GL +A +VK A  +   M ERG  P+   Y+ L++  C    LD A +L 
Sbjct: 286 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLV 345

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK-MEKAGCFPSVGMFNALIDGLCK 425
            +  ++  + +   +T+L+ G+C+ G  D+A  LF+K +++  C P V  +N ++D  CK
Sbjct: 346 EQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 405

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
             +++KA L  +K  + +N               +  +   +V   C    +  A  +L+
Sbjct: 406 RRQIDKA-LQIHKQMLERNCC-------------NVVTWNILVHGLCVDDRLSDAETMLL 451

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + + G +PD +TY +L++  CK G    AL+LF+E    G  PD VTY  LI GL   +
Sbjct: 452 TMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHEN 511

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESM 604
             E+A+ +F ++         A++ +++          L   L+++ +  D+        
Sbjct: 512 MAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFG 564

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           K I   L K E     +GL +   K     D  +A   I +   C  G ++EA  IF
Sbjct: 565 KEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKC--GDLEEARRIF 619



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 272/543 (50%), Gaps = 23/543 (4%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  +   P+ FT+ I++ GLC+ N+ ++A +L  +MK+ GC PD   YNAL++G+ K + 
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             +A   L    K+  +P + +Y+ ++DGL +A R  +A     +M ++   P++  Y V
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++ GL E  K+ +A K+L +M  RG  PD   YN+ IKG C    +D+AR     + +  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA- 432
             P+  ++T +I G+C++G +D A ++ ++M   GC P V  +++LIDG CK GE+E+A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            LL   +++G  P +               +  +++      G I KA  +L+++   G 
Sbjct: 238 GLLDSMLKLGCRPNM--------------VAYNSLLGALHRLGHIGKAEDMLVEMERRGF 283

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD+++YN+ I+G CK   +  A  +F  +  +G  P++ +Y  L+  L +    +DA  
Sbjct: 284 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEF 610
           +  Q  +        +Y  L+   C+  +F  A +L+ + L +     D    ++  +  
Sbjct: 344 LVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 403

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            ++ +++ A+Q   +M  + N   +  + I + GLC D ++ +A  +   +V+   I   
Sbjct: 404 CKRRQIDKALQIHKQM-LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 462

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   L+  +CK G    A+++F   +K G +  P V  Y         +N    AY L 
Sbjct: 463 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCV--PDVVTYSALITGLVHENMAEEAYLLF 520

Query: 731 CRM 733
            ++
Sbjct: 521 TKL 523



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 229/480 (47%), Gaps = 27/480 (5%)

Query: 86  LDELRS--GNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           +DE R     + V  DV  +  +I+G  K GD + A     +M    C PDV  Y+++++
Sbjct: 166 VDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID 225

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              +      A+ +   M+KL C PN+V ++ L+  L + G    A  ML EM +RG  P
Sbjct: 226 GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 285

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           +  +Y   I GLC+  R  +A  +F +M + GC+P+  +Y+ L+   CK + +D+A+ L+
Sbjct: 286 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLV 345

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-EPDVVLYGVMIRGLSE 320
               +   +  +  Y+ L+DGL +  R+DEA A + K+ +EKI EPDV  Y VM+    +
Sbjct: 346 EQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCK 405

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++  A+++   M ER    +   +N L+ G C    L  A ++ + +     +P+  T
Sbjct: 406 RRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 464

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +  L+  MC+ G    A +LF +  K GC P V  ++ALI GL      E+A LLF K++
Sbjct: 465 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD 524

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +                    A    M+  Y   G      K+ ++L ES   P+  T+ 
Sbjct: 525 V--------------------ALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFG 564

Query: 501 SLING-FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             I+G   K  ++  A  LF      G  PD     TLI+   +    E+A RIF  M Q
Sbjct: 565 KEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 219/463 (47%), Gaps = 27/463 (5%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI+ L K    D   + LD++ +   +     +  LI G+ K G+ E+A+     M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +  C+P++  YN++L    R      A  +  EM +    P++V+++  I+GL K+ + 
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A  + D M +RG  PN  +Y++++  LC+    D+A  L  + ++     D + Y  L
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363

Query: 245 LNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+G CK  R DEA AL  +  ++    P +  Y+ ++D   + ++ D+A   +++M E  
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
              +VV + +++ GL    ++ DA  +L  M + G +PD   Y  L+   C  G    A 
Sbjct: 424 C-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 482

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E  K   +P+  T++ LI G+    M ++A  LF K++       V ++NA+I G 
Sbjct: 483 ELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD-------VALWNAMILGY 535

Query: 424 CKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            + G  +    LF ++   ++  N   F +   G               +   A  + KA
Sbjct: 536 AENGSGDLGLKLFVELIESDVEPNARTFGKEISG---------------KLVKAESLGKA 580

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             +  +  + G  PD+   N+LI+ F K G++  A ++F  ++
Sbjct: 581 RGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 10/304 (3%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           +S S ++  L K    D     +++ R     V   ++ VL+ G  K G  ++A   F K
Sbjct: 323 SSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSK 382

Query: 124 -MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            + E  C+PDV+ YN +L+   +++    AL ++ +M++ NC  N+VT+++L++GL    
Sbjct: 383 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDD 441

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           +   A  ML  M   G +P+  TY  ++  +C+  ++  A  LF +    GC PD V Y+
Sbjct: 442 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           AL+ G       +EA  L    +       +  ++ +I G       D     + ++ E 
Sbjct: 502 ALITGLVHENMAEEAYLLFTKLD-------VALWNAMILGYAENGSGDLGLKLFVELIES 554

Query: 303 KIEPDVVLYGVMIRG-LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            +EP+   +G  I G L +A  +  A  L     + G  PD +  N LI  F   G L++
Sbjct: 555 DVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEE 614

Query: 362 ARSL 365
           AR +
Sbjct: 615 ARRI 618


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 278/592 (46%), Gaps = 23/592 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+A+    K+    C P +  YNA+LN   +      A+ +  ++V   C P++VT++ L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL K  ++  A K+  EM  RG+  +   YT +I  L Q  +  +A  ++  M   GC
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V  + +++G  K  R+  A+ + +S E  G  P    YS LI GL +A++ D A  
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M +    PD + Y V+I GL ++G V+ A     +M E G  PD Y YN LI GFC
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242

Query: 355 DLGLLDQA-RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             G  D A  SL  E        + HT+T ++  + +N  +++A  L  K+   GC P++
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTI 302

Query: 414 GMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +NAL++GLCK G LE+A +LL   ++ G  P +    S       +K S +       
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE------- 355

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
                  AYK+  ++A  G   D + Y +LI    + G I  A  ++K +   G  PD V
Sbjct: 356 -------AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 408

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           T  T+I+GL +  R   A RIF  M   G  P+  VY +L+   C+ RK   A  +  Q 
Sbjct: 409 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 468

Query: 593 LRDISGRDDESMKS-IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +     D  +    I+   + G+VE A      +LE   K + +    Y I + G C+ 
Sbjct: 469 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT---YNILISGFCKA 525

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           G    A  +F  +   +      +   LI GLCKR  L  A   F +  + G
Sbjct: 526 GNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 256/523 (48%), Gaps = 32/523 (6%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTL---DELRSGNVSVVSDVF------------- 101
           K  RSF +      M L+    D    T    + L++G +   S V+             
Sbjct: 68  KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127

Query: 102 --FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
               +I G  K G    A+  F  M+     P+  +Y+A+++   + +    AL +  +M
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K  C P+ +T+++LI+GL KSG  E A    DEM + G  P+ +TY I+ISG C+    
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNT 247

Query: 220 DEA-YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           D A + L  +   +GC+ D   Y A+++   K ++++EA+AL+     +G  P + +Y+ 
Sbjct: 248 DAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNA 307

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++GL +  R +EA    RK+ +    PDVV Y  +I GL +  +  +A KL  +M  RG
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 367

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  DT CY ALI+     G + QA S+   +     +P+  T + +I G+ + G +  A 
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAV 427

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++F  ME  G  P+  +++ALI GLCKA +++ A  +  +M             +     
Sbjct: 428 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-------------KKAFCT 474

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++  C +G +  A     ++ E+G  PD+ TYN LI+GFCK GN + A  +
Sbjct: 475 PDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 534

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           F ++       + VTYG LI+GL +  +   A   F  M + G
Sbjct: 535 FDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 178/433 (41%), Gaps = 54/433 (12%)

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           + +EA A   K+      P +  Y  ++ GL + G++++A+ LL  + + G  PD   Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +LI G        +A  L  E+  R    +T  +T LI  + + G +  A  ++  M   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASL 464
           GC P V   + +IDGL KAG +  A  +F  ME   +  N  ++  L  G          
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG---------- 170

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
                  C A  +  A ++L Q+ ++   PD ITYN LI+G CK G++  A   F E+  
Sbjct: 171 ------LCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE 224

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ-NGCTPSPAVYKSLMTWSCRRRKFS 583
            G +PD  TY  LI+G  +    + A     Q    NGCT     Y +++ W  + +K  
Sbjct: 225 AGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIE 284

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A +L                  +E+    G                    +A Y   L 
Sbjct: 285 EAVAL------------------MEKITANGCTPT----------------IATYNALLN 310

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GLC+ G+++EA+++   +V+        +   LI GL K      A  +F      G  L
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370

Query: 704 RPRVCNYLLRSLL 716
                  L+R LL
Sbjct: 371 DTVCYTALIRELL 383


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 306/586 (52%), Gaps = 39/586 (6%)

Query: 4   TLNEVLTILDTVTPIEPALEP-LLPFLSKTT----VTSVIMKTKNPQVGFRFFIWAAKRK 58
           T+  +L +L +  P   A+EP L PF   +T    V  V+   K+ ++   FF WA    
Sbjct: 12  TVTAILNLLHSGRPWS-AIEPDLSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASI 70

Query: 59  ---RLRSFASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
                 +F+ NS ++ +L++        DL+   L  L S    V S  + ++ISG+   
Sbjct: 71  PGFSHTAFSWNS-LLQVLVRCKKHREAGDLFRSEL--LASCEPDVCS--YNIVISGFCNA 125

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           GD   ALE   +MK     PD + +  ++           A+     +  + C PN+VT+
Sbjct: 126 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTY 182

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI   +++ K E A+K+L+EM +RG  PN  TY +++  LC+++    A  +  KM +
Sbjct: 183 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 242

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G +P+ + +N+L++GFCK   VD+A  LL      G  P + +YS LIDGL +++++ E
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A     +M    + PD   Y  +I GL +A K+++A ++L  M   G  PD   Y+++I 
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-CF 410
            FC  G L +A+    E+ K+   P+  T+  +I G+C+ G + +AQ +  +M+++G   
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVL 422

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P V  ++ +I+GLCK+  L +A  L  +M + G NP              D  +  T+++
Sbjct: 423 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP--------------DVVTYTTIID 468

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + +A  +L  +  +G  P+++TY +LI+G CK   ++ A ++ +E++  G  P
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMP--QNGCTPSPAVYKSLM 573
           + VTY T++NGL    R ++A ++  +M   +  C+P  A Y++++
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 574



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 266/539 (49%), Gaps = 51/539 (9%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
            + +N++L +  R +    A  ++   +  +C P++ +++++I+G   +G    A+++L+
Sbjct: 77  AFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLE 136

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM   G  P+ FT+T +I+ +      D A      M   GC P+ V Y AL+  F + +
Sbjct: 137 EMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAK 193

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           +++EA+ LL    + G  P L +Y+ L+D L +      A    +KM E    P+V+ + 
Sbjct: 194 KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 253

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ G  + G V DA KLL  M  +G+ P+   Y+ALI G C      +A+ +  E+  R
Sbjct: 254 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTR 313

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+  T++ LI G+C+   +++A+++  +M  +GC P V +++++I   CK+G+L +A
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 373

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                +M   +             +  D  +  T+++  C  G I +A  IL Q+ ESG+
Sbjct: 374 QKTLQEMRKQR-------------KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420

Query: 493 -LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            LPD++TY+++ING CK   +  A KL   +   G  PD VTY T+I+GL +  R E+A 
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            +   M + GC P+   Y +L++  C+ RK                   DE+ + +EE  
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKV------------------DEAERVMEEMR 522

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
             G   N                L  Y   + GLC  G++KEA  +   + + +A  +P
Sbjct: 523 NAGCPPN----------------LVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 565



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 227/481 (47%), Gaps = 38/481 (7%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF     S++ L+  L R K++ EA   +R       EPDV  Y ++I G   AG +  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSLPNTHTFTI 383
           ++LL +M+  G  PD + +  +I    + G LD A    RS+  +       PN  T+T 
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD-------PNVVTYTA 184

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI    R   +++A KL  +M + GC P++  +N L+D LCK   +  A  +  KM E G
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P +               +  ++V+ +C  G +  A K+L  +   G  P+++TY++L
Sbjct: 245 FAPNVM--------------TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 290

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+G CK      A ++ +E++ +G+ PD+ TY  LI+GL + D+ E+A ++  +M  +GC
Sbjct: 291 IDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 350

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAI 620
           TP   VY S++   C+  K  L     LQ +R      D    +  I+   + G++  A 
Sbjct: 351 TPDVVVYSSIIHAFCKSGKL-LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA- 408

Query: 621 QGLLEMDFKLNDF--QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKL 676
           Q +LE   +  D    +  Y+  + GLC+   + EA  +   +  CKA   P   +   +
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM--CKAGCNPDVVTYTTI 466

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I GLCK G L+ A +  L  +K      P V  Y        K  K   A  ++  M++ 
Sbjct: 467 IDGLCKCGRLEEA-EYLLQGMKRAGCA-PNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524

Query: 737 G 737
           G
Sbjct: 525 G 525



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 38/237 (16%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K        +TL E+R    S     +  +I G  K+G   +A     +M+E
Sbjct: 358 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417

Query: 127 F-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
             D  PDV  Y+ V+N   +  + + A  +   M K  C P++VT++ +I+GL K G+ E
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 477

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC----------- 234
            A  +L  M + G  PN  TYT +ISGLC+  + DEA R+  +M+++GC           
Sbjct: 478 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 537

Query: 235 --------------------------SPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
                                     SPD   Y  ++N       V EA  LL   +
Sbjct: 538 NGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 6/173 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDEL-RSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S VI+ L K +      + LD + ++G N  VV+  +  +I G  K G  E+A      M
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVT--YTTIIDGLCKCGRLEEAEYLLQGM 486

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K   C P+V  Y  +++   + +    A  V  EM    C PN+VT++ ++NGL  SG+ 
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546

Query: 185 EVAIKMLDEMT--QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + A +++  M   +    P+  TY  +++ L   +   EA +L  +MK +  S
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSS 599


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 185/693 (26%), Positives = 317/693 (45%), Gaps = 21/693 (3%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLD 87
           L    V +VI    +P    + F         + +  +   +I  L     F+     L 
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 88  ELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           E+R   +  ++  V+  ++  Y + G  ++A+  F +M  +DC+P V  YNA++NI    
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
             F  A  VY  M  +   P++ T ++ +     +G+   A+++L+ M  +G   N  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             VISG  + N   EAY LF +M   G  PD + +N L++  CK   V E+  L     K
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P L +++  I GL R    DEA      +  E + PDV+ Y  +I G  +  K+ +
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A   L  M   G+ P+ + YN +I GFC  G++  A  +  +   +  +P+  T++ LI 
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNP 445
           G+C +G ++ A  +F +  + G   S+ ++N L+ GL K G  L+   L+   ME G +P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            ++              +   +V   C  G +  A  IL      G +PDI T+N+LI+G
Sbjct: 425 DIW--------------TYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +CK  N++ A+++   +   G+ PD +TY TL+NGL +  + ++    F  M + GCTP+
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGL- 623
              Y  L+   C+ RK S A  L+ +   R ++         I      GE++ A +   
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV 590

Query: 624 -LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
            +E ++K + +  A + I +   C+   V  A  +F  +          +   +I   CK
Sbjct: 591 TIEKEYKFS-YSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            G +DLA    L  +  G +     C  +L  L
Sbjct: 650 TGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 293/609 (48%), Gaps = 25/609 (4%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALE 119
           S  S +A++++L++   F    +    +R  ++ +  DV+   + +  +   G    AL 
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVY--MRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M    C+ +   Y AV++  +++   + A  ++ EM+K    P+I+TF+ LI+ L 
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G  + + K+  ++ +RG+ PN FT+ I I GLC+    DEA RL   +   G +PD +
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           +YN L+ GFCK  ++ EA   L      G  P   +Y+ +I+G  +A     A    R  
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             +   PD   Y  +I GL   G +  AM +  +  E+G       YN L+KG    GL+
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            QA  L  ++ +    P+  T+ +++ G+C+ G + DA  + N     GC P +  FN L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           IDG CK   ++KA      +EI     L   LS G     D  +  T++   C A  +  
Sbjct: 468 IDGYCKQRNMDKA------IEI-----LDTMLSHG--ITPDVITYNTLLNGLCKARKLDN 514

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
                  + E G  P+IITYN LI  FCK   ++ A++LFKE++ +GL PD VT  TLI 
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574

Query: 540 GLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           GL      + A+ +F  + +    + S A++  ++   C +   S+A  L+ +       
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCA 634

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW---LIGLCQDGQVKEA 654
            D+ + +  I+ + + G ++ A   LLE    ++   +  +T     L  LC   ++ EA
Sbjct: 635 PDNYTYRVMIDSYCKTGNIDLAHTFLLE---NISKGLVPSFTTCGKVLNCLCVTHRLSEA 691

Query: 655 LNIFSVLVE 663
           + I +++V+
Sbjct: 692 VVIINLMVQ 700



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 235/524 (44%), Gaps = 20/524 (3%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
            L+   +  V+ K  N Q   + F    KR    +  + +  I  L +    D   + L+
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            + S  ++     +  LI G+ K     +A     KM     +P+ + YN ++N   +  
Sbjct: 276 SIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           +   A  +  + +    +P+  T+S LINGL   G    A+ +  E  ++G   +   Y 
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYN 395

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            ++ GL +     +A +L   M + GCSPD   YN ++NG CK+  + +A  +L      
Sbjct: 396 TLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +++ LIDG  + +  D+A      M    I PDV+ Y  ++ GL +A K+ + 
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +     M E+G  P+   YN LI+ FC    + +A  L  E+  R   P+  T   LICG
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFP-SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           +C NG +D A +LF  +EK   F  S  +FN +I+  C+   +  A  LF+KM       
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM------- 628

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                  G +   D  + + M++ YC  G I  A+  L++    G +P   T   ++N  
Sbjct: 629 ------GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           C    ++ A+ +   +   G+ P+ V      N +   D++E A
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVA 720



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 232/563 (41%), Gaps = 86/563 (15%)

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           + GK + A+ + + M      P+  +Y  +++ L +     +A++++++MKD G  PD  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            +   +  FC   R   AL LL +    G      SY  +I G ++     EAY      
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY------ 201

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                                         L  +M ++GI PD   +N LI   C  G +
Sbjct: 202 -----------------------------HLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            ++  L  ++ KR   PN  TF I I G+CR G +D+A +L   +   G  P V  +N L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I G CK  +L +A    +KM   G  P  F              +  T++  +C AG++ 
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEF--------------TYNTIINGFCKAGMMQ 338

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A KIL      G +PD  TY+SLING C  G++N A+ +F E   KG +   + Y TL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
            GL +      A ++   M ++GC+P    Y  ++   C+           +  L D +G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK-----------MGCLSDANG 447

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                   + + + KG + +                +  +   + G C+   + +A+ I 
Sbjct: 448 -------ILNDAIAKGCIPD----------------IFTFNTLIDGYCKQRNMDKAIEIL 484

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             ++         +   L++GLCK   LD  +D F   L+ G    P +  Y +    F 
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG--CTPNIITYNILIESFC 542

Query: 719 KDNKKVHAYHLLCRMKSVGYDLD 741
           KD K   A  L   MK+ G   D
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPD 565


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 221/831 (26%), Positives = 349/831 (41%), Gaps = 154/831 (18%)

Query: 6   NEVLTILDTVT-----PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR--- 57
           N V  +LD ++     P  P L  L   L    V+ +I    N     +FF W +KR   
Sbjct: 41  NLVFKVLDLISTDPHWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFY 100

Query: 58  ----------------------------------------KRLRSF-----ASNSAVI-- 70
                                                   KR+  F     +S+S +   
Sbjct: 101 KHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGF 160

Query: 71  ------SMLLKPNGFDLYWQTLD---ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
                 ++LL+   FD+     +   ++ S  V      F  +I+   K G  ++A+  F
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            K+ +FD  PD + Y +++    R +    A  V+  MVK  C PN VT+S LINGL   
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+   A+ ML+EMT++GI P  +TYT+ IS LC I R D+A  L   M   GCSP    Y
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID-------------------- 281
            A+++G  +  +++ A+ +     K+G VP   +Y+ LI+                    
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 282 ---------------GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
                          GLF     ++A   + KM ++   P VV Y  +I    + G + +
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A + L  M+E    PD   Y  LI GFC  G LD A S   E+ K    PN  T+T +I 
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G C+ G +D A  LF +ME+ GC  S+  +NA+I GL K     +A     KM E G  P
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +  +  +++   C     + A+KI  ++ +   LP+  TY SLI G
Sbjct: 581 --------------NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYG 626

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G ++ A +L +     G  P   TY TL++GL R  R  +A ++   M + G +PS
Sbjct: 627 LCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPS 682

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
             +Y SL+   C+  K   A  ++             ++ +++ F               
Sbjct: 683 MEIYCSLLVAHCKSLKVDCALEIF-------------NLMAVKGFQP------------- 716

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                    L  Y + +  LC   + +EALNIF  L++ +          L+ GL + G 
Sbjct: 717 --------HLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
            DL M  FLY +++     P +  Y++ +   SK  K +    +  R++ V
Sbjct: 769 SDLCMK-FLYLMESRNC-TPSLHTYIILARELSKVGKSIGTDQIGNRLREV 817


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 194/704 (27%), Positives = 317/704 (45%), Gaps = 76/704 (10%)

Query: 25  LLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFD 80
           L P  +   +   + +  +     R F WA+K+    +F  +S+V   +L    K   F+
Sbjct: 58  LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQP---NFVPSSSVYEEILRKLGKAGSFE 114

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK----EFDCQPDVYIY 136
              + L+E++         +F + +  Y   G  E   E  G +K    E+  +PD   Y
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESY---GKFELYDEVVGIVKVMEDEYRIKPDTRFY 171

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +LN+        L  + +  MV+     ++ TF++LI  L K+ +   AI M++EM  
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G+ P++ T+T ++ G  +    D A R+  +M + GC    V  N L+NGFCK  R+D+
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           AL+ ++    +GF P   +Y+ L++GL +      A      M    ++PD+  Y  +I 
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLIS 351

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G++++A+K+L  M  R   P+   YNA+I   C    +D+A  +   +  +  LP
Sbjct: 352 GLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILP 411

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TF  LI G+C +     A  LF +M+  GC P    +N LID LC + +LE+A  L 
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471

Query: 437 YKMEI---GKNPTLFLRLSQG---------GNRVHDKASLQ----------TMVEQYCTA 474
            +ME+    +N  ++  L  G            + D+  LQ          T+++  C +
Sbjct: 472 KEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             +  A +++ Q+   G  PD  TYNSL+  FCK G+I  A  + + +   G  PD VTY
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TLI+GL +  R + A R+   +   G   +P  Y  ++    +R               
Sbjct: 592 ATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKR--------------- 636

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKE 653
               R  E+M+   E L K E  +AI                 Y I   GLC   G + E
Sbjct: 637 ---NRTHEAMRLFREMLDKSEPPDAIT----------------YKIVYRGLCNGGGPIGE 677

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           A++    ++E   I    S V L  GLC      L+MD  L  L
Sbjct: 678 AVDFTVEMIERGNIPEFSSFVMLAEGLCT-----LSMDDTLVKL 716



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L++G  K+G  + A+E    M      PD+Y YN++++   +      A+ +  +M
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  +C PN VT++ +I+ L K  + + A ++   +T +GILP+  T+  +I GLC  +  
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +MK  GC PD   YN L++  C  R+++EAL LL+  E +G    +  Y+ L
Sbjct: 430 KSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTL 489

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  + KR +EA   + +M  + +  D V Y  +I GL ++ +V+DA +L+  M   G+
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + YN+L+  FC  G + +A  +   +      P+  T+  LI G+C+ G V  A +
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L   ++  G   +   +N +I  L K     +A  LF +M     P              
Sbjct: 610 LLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPP------------- 656

Query: 460 DKASLQTMVEQYCTAG-LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           D  + + +    C  G  I +A    +++ E GN+P+  ++  L  G C +   +  +KL
Sbjct: 657 DAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKL 716

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              +  K    +     + I G  ++ + +DA    G
Sbjct: 717 VDMIMEKAKFSEREI--STIRGFLKIRKFQDALSTLG 751



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 70/258 (27%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  DE+    VS  S  +  LI G  K    E A +   +M     +PD + YN++L   
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--- 200
            +      A  +   M    C P+IVT++ LI+GL K+G+ +VA ++L  +  +G++   
Sbjct: 564 CKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623

Query: 201 --------------------------------PNKFTYTIVISGLCQINRA-DEAYRLFL 227
                                           P+  TY IV  GLC       EA    +
Sbjct: 624 HAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTV 683

Query: 228 KMKDSGCSPDFVAYNALLNGFC---------------------------------KLRRV 254
           +M + G  P+F ++  L  G C                                 K+R+ 
Sbjct: 684 EMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTIRGFLKIRKF 743

Query: 255 DEALALLRSFEKDGFVPR 272
            +AL+ L     D + PR
Sbjct: 744 QDALSTLGGILDDMY-PR 760



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 15/276 (5%)

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           +P    Y  ++    K G+     ++ +E++L G   D   +   +    + +  ++   
Sbjct: 94  VPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVG 153

Query: 553 IFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           I   M       P    Y  L+       K  L  S     +R     D  +    I+  
Sbjct: 154 IVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKAL 213

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKA 666
            +  +V  AI  + EM      + L+P    +T  + G  + G +  AL I   +VE   
Sbjct: 214 CKAHQVRPAILMMEEMP----SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGC 269

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
             T  +   LI+G CK+G +D A+      +  GF  RP    Y        K     HA
Sbjct: 270 PCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGF--RPDQFTYNTLVNGLCKIGHAKHA 327

Query: 727 YHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
             ++  M   G D D   Y    SL+ G     E+E
Sbjct: 328 MEVVDAMLLGGLDPDIYTY---NSLISGLCKLGEIE 360


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 190/756 (25%), Positives = 335/756 (44%), Gaps = 123/756 (16%)

Query: 14  TVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWA------------------- 54
           +V  I   L P+   +  + V +V+   K       FF WA                   
Sbjct: 69  SVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNL 128

Query: 55  --AKRKRLRSFASNSAVISMLLKPN--GFDLYWQTLDELRSGNVSVVS------------ 98
             A++   + +A +  ++   + PN   F++  ++    R  + +V              
Sbjct: 129 LVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPD 188

Query: 99  -DVFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVY 156
              F +L+    K G  EKA E F +M       PD  ++ A++    + +    A  V+
Sbjct: 189 LHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVF 248

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M K    P+ + ++ +I+GL+K+G  + A+K+LD M  +  +P + TY I+++ LC+ 
Sbjct: 249 GQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA 308

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              + A  LF  M  SG  P+ V Y +L++GF K  R+ EA +L     + G+ P + ++
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +IDGL ++  +++A   + +M     +P+VV Y  +I+GLS+ G+V +A +++  M  
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL------------ 384
            G  PD+  Y  L+ GFC LG LD+A  L  E+ K  S PN   ++ L            
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488

Query: 385 ------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
                                   I G+C+ G +D+A ++F +M   GC P    +N LI
Sbjct: 489 TLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 421 DGLCKAGE--LEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +GLC++ E  +E+A  L + +E +G  P              D  +   +    C  G +
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLP--------------DAVTYTPLCIGLCKIGEV 594

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A K+L + +  G   D++ Y +L  G C  G ++ A+ LF+E+  +G  PD+  Y  +
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           INGL +V + EDA + F +M   G  P+ A Y +L+   C                   +
Sbjct: 655 INGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH------------------A 696

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G  DE+    E  L +GE+  ++                 Y   + G C+  +V  AL +
Sbjct: 697 GNVDEAFHRFESMLARGELVGSVM---------------IYDALIHGFCKALKVDAALKL 741

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           F  ++    + T  +   L  GL + G  + A ++ 
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 241/483 (49%), Gaps = 23/483 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S ++  LI G+ K G  ++A   F +M E   +PDV  +  +++   +   F  A   + 
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM++  C PN+VT++ +I GLSK G+   A +++  M   G  P+  TY  ++ G C++ 
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL---G 274
           R DEA +L  ++     SP+   Y++L+NG C    V++ L  L  FE+          G
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDL--FEQSKAAAETLDPG 507

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--SEAGKVKDAMKLLS 332
               +I GL +  R DEA   +++M  E  +PD   Y ++I GL  S   +V+ A  LL 
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           D+ + G +PD   Y  L  G C +G +D+A  +  E   R    +   +T L  G+C  G
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            VD A  LF +M + G  P    +  +I+GL K  +LE A   F +M   G+ PT+    
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV---- 683

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVG 510
                     A+   +V+  C AG + +A+     +   G L   ++ Y++LI+GFCK  
Sbjct: 684 ----------ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL 733

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ ALKLF+++  +G  P +VT  +L +GL R  + E A  +  +M   G  P  A + 
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 571 SLM 573
           +++
Sbjct: 794 AIL 796



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 299/671 (44%), Gaps = 65/671 (9%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-------------------------- 163
           Q DV+ YN ++N+   ++ +    A++ EM+K                            
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175

Query: 164 ---------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGL 213
                    C P++ TF +L++ L K+G  E A ++  EM   G + P++  +T ++  L
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            +  R  EA  +F +M+  G  PD +AYN +++G  K     EAL +L +      VP  
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y  L++ L +A   + A   +R M      P+ V+Y  +I G +++G++K+A  L  +
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M E G  PD   +  +I G C  G  +QA     E+ +    PN  T+T +I G+ + G 
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL--- 449
           V +A ++   M   GCFP    +  L+DG CK G L++A  L  +++    +P L L   
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475

Query: 450 ---RLSQGGNR--------VHDKASLQTM--------VEQYCTAGLIHKAYKILMQLAES 490
               L  GG+            KA+ +T+        +   C  G + +A +I  ++   
Sbjct: 476 LVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535

Query: 491 GNLPDIITYNSLINGFCKV--GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           G  PD  TYN LING C+     +  A  L  +L+  G  PD+VTY  L  GL ++   +
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVD 595

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            A ++  +    G       Y +L T  C + +   A SL+ + +R     D  +   I 
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655

Query: 609 EFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVECKA 666
             L K  ++E+A +   EM  K     +A YT  +  LC  G V EA + F S+L   + 
Sbjct: 656 NGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGEL 715

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           + +      LIHG CK   +D A+ +F   +  G +        L   L+ S   +K  A
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK--A 773

Query: 727 YHLLCRMKSVG 737
             LL  M + G
Sbjct: 774 QELLQEMAAGG 784



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 243/540 (45%), Gaps = 61/540 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K        + LD + +         + +L++   K G  E+A E F  M  
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+  IY ++++   +      A +++ EMV+    P+++T +++I+GL KSG  E 
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K  +EM + G  PN  TYT +I GL +I R   A+R+   M   GC PD V Y  LL+
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF---------------------- 284
           GFCKL R+DEA  LL   +K    P L  YS L++GL                       
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503

Query: 285 --------------RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--SEAGKVKDAM 328
                         +  R DEA   +++M  E  +PD   Y ++I GL  S   +V+ A 
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            LL D+ + G +PD   Y  L  G C +G +D+A  +  E   R    +   +T L  G+
Sbjct: 564 ALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT- 446
           C  G VD A  LF +M + G  P    +  +I+GL K  +LE A   F +M   G+ PT 
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683

Query: 447 -----LFLRLSQGGN---RVHDKASL-------------QTMVEQYCTAGLIHKAYKILM 485
                L   L   GN     H   S+               ++  +C A  +  A K+  
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   GN+P  +T  SL +G  + G    A +L +E+   G  P + T+  +++GL++ D
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 232/519 (44%), Gaps = 51/519 (9%)

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           + +G   D   YN L+N     +   +  A+     K G  P   S++ LI    R +R 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNA 348
           D+A   +  M  ++ +PD+  + +++  L +AG  + A ++  +M   G V PD   + A
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +++       + +AR +  ++ K    P+   +  +I G+ + G   +A K+ + M    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTM 467
           C P+   +  L++ LCKAG LE+A  LF  M   G  P   +  S              +
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTS--------------L 336

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +  +G + +A  +  ++ E+G  PD+IT+  +I+G CK GN   A K F+E+   G 
Sbjct: 337 IHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGC 396

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P+ VTY T+I GL ++ R  +AFRI   M  +GC P    Y  L+              
Sbjct: 397 KPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL-------------- 442

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                               + F + G ++ A Q L E+D   +   L  Y+  + GLC 
Sbjct: 443 --------------------DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCD 482

Query: 648 DGQVKEAL-NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
            G V++ L ++F         + P  C  +I GLCK G LD A  +F   +  G      
Sbjct: 483 GGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N L+  L  S++N+   A+ LL  ++ VGY  DA  Y
Sbjct: 543 TYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 176/357 (49%), Gaps = 4/357 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES-FGKMKEFDCQPDVYIYN 137
            D   Q LDEL   + S    ++  L++G    G  EK L+  F + K      D  +  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC 510

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL--SKSGKTEVAIKMLDEMT 195
           +++    +      A  ++  MV   C P+  T+++LINGL  S+  + E A  +L ++ 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           + G LP+  TYT +  GLC+I   D A ++  +    G + D VAY AL  G C   +VD
Sbjct: 571 KVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A++L +   + G  P   +Y C+I+GL + K+ ++A  ++ +M  +  +P V  Y  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 316 RGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + L  AG V +A      M  RG +V     Y+ALI GFC    +D A  L  ++  R +
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +P   T   L  G+ R+G  + AQ+L  +M   G  P    F A++DGL K+ E  K
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L  G  K+G+ ++A++   +        DV  Y A+      +     A++++ EMV+  
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+   +  +INGL K  K E A K  DEM  +G  P   TYT ++  LC     DEA+
Sbjct: 644 GAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703

Query: 224 RLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             F  M   G      + Y+AL++GFCK  +VD AL L       G VP   + + L DG
Sbjct: 704 HRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
           L R+ + ++A    ++M      P    +  ++ GL ++ +    +KL+ +
Sbjct: 764 LVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 165/563 (29%), Positives = 279/563 (49%), Gaps = 35/563 (6%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAVY 156
           S VF +++    +V    KAL      K +   P V  YNA+L+   R KQ   +A  ++
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EMV+    PN+ T+++LI G   +G  E+ +    EM + G LPN  TY  +I   C++
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            +  EA++L   M   G +P+ ++YN ++NG C+  ++ E   +L    K  +VP   ++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+G      + +A   + +M +  + P+VV Y  +I  + +AG +  AM+ L  MR+
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG+ P+   Y  LI GF   G L QA  +  E+ +    P   T+  LI G C  G ++D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A  L  +M + G  P V  ++ +I G C+  ELEKA  L  +M   G +P          
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP---------- 481

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+  ++++  C    + +   +  ++   G  PD +TY SLIN +C  G+++ A
Sbjct: 482 ----DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L+L  E+  KG  PD VTY  LING  +  R ++A R+  ++      P+   Y +L+  
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID- 596

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           +C   +F  A +L   +   + G  +E+ + +E  LQKG             +KLN+   
Sbjct: 597 NCNNLEFKSALALMKGFC--MKGLMNEADRVLESMLQKG-------------YKLNE--- 638

Query: 636 APYTIWLIGLCQDGQVKEALNIF 658
             Y + + G  + G +++A N++
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLY 661



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 254/505 (50%), Gaps = 38/505 (7%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    VS     + +LI G+   G+ E  L  FG+M+   C P+V  YN +++ A+ K 
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID-AYCK- 250

Query: 148 LFLLALAVYYEMVKLNCL----PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             L  +   +++++L  L    PN+++++++INGL + G+ +   ++L+EM++R  +P++
Sbjct: 251 --LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I+G C +    +A  L  +M  +G SP+ V Y  L+N  CK   ++ A+  L  
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P   +Y+ LIDG  +     +AY   ++M E    P ++ Y  +I G    G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           ++DA  LL +M ERG +PD   Y+ +I GFC    L++A  L+VE+  +   P+  T++ 
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI G+C+   + +   LF +M   G  P    + +LI+  C  G+L+KA  L  +M + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P              D  +   ++  +       +A ++L++L    ++P+ ITYN+L
Sbjct: 549 FSP--------------DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 503 IN---------------GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           I+               GFC  G +N A ++ + +  KG + +   Y  +I+G  +V   
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSL 572
           E A+ ++ +M  +G  P      +L
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 270/565 (47%), Gaps = 44/565 (7%)

Query: 216 INRADEAYR-LFLKMKDS--GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           +N  DE    LF  +K+S   C      ++ ++    ++  +++AL+++   +  GF+P 
Sbjct: 107 VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPG 166

Query: 273 LGSYSCLIDGLFRAKRYDE-AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + SY+ ++D + R K+  + A   +++M E  + P+V  Y ++IRG   AG ++  +   
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFF 226

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M   G +P+   YN +I  +C L  + +A  L   +  +   PN  ++ ++I G+CR 
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP----- 445
           G + +  ++  +M K    P    FN LI+G C  G   +A +L  +M + G +P     
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 446 -TLFLRLSQGGN---------RVHDKA------SLQTMVEQYCTAGLIHKAYKILMQLAE 489
            TL   + + GN         ++ D+       +  T+++ +   G + +AY+I+ ++ E
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +G  P IITYN+LING C +G +  A  L +E+  +G  PD V+Y T+I+G  R    E 
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IE 608
           AF++  +M   G +P  A Y SL+   C++R+      L+ + L      D+ +  S I 
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI----------- 657
            +  +G+++ A++   EM  K     +  Y + + G  +  + KEA  +           
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586

Query: 658 ----FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
               ++ L++    +   S + L+ G C +G ++ A  V    L+ G+ L   V N ++ 
Sbjct: 587 NEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGY 738
               SK      AY+L   M   G+
Sbjct: 647 G--HSKVGNIEKAYNLYKEMLHSGF 669



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 15/344 (4%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +Q + E+     +     +  LI+G+  +G  E A     +M E    PDV  Y+ +++ 
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R Q    A  +  EMV     P++ T+S LI GL K  +      +  EM   G+ P+
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           + TYT +I+  C     D+A RL  +M   G SPD V YN L+NGF K  R  EA  LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 263 SFEKDGFVPRLGSYSCLID---------------GLFRAKRYDEAYAWYRKMFEEKIEPD 307
               +  VP   +Y+ LID               G       +EA      M ++  + +
Sbjct: 578 KLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
             +Y V+I G S+ G ++ A  L  +M   G  P +    AL K     G   +   L  
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
              K   +       +LI    + G +D    +   M  +G  P
Sbjct: 698 YTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 186/629 (29%), Positives = 312/629 (49%), Gaps = 76/629 (12%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            V++S + +    + AL++F  +     C P +  +NA+L+   R + F  A A +  + 
Sbjct: 87  LVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS 146

Query: 161 K----LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
                    PN+ T+++++  L   G  + A+ + D + +R + P+  TY+ ++ GL + 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGS 275
           +R D A  L  +M  SG  PD V YNALL G  K    ++ + +     KD G  P L +
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++DGL +  R+ E    + +M    ++PDV+ YG++I GL  +G V  A ++ S++ 
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDS-----LPNTHTFTILICGMC 389
           + G+V D   YN+L+KGFC  G + +A       WK  DS     L N  T+ I+I G+ 
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEA-------WKFWDSAGFAGLRNLRTYNIMIKGLF 379

Query: 390 RNGMVDDAQKLFNKMEK-AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL 447
            +GMVD+A +L++ +EK   C P    F  LI GLC+ G   KA  +F +  + GK   +
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F              S  +M+   C  G +  A K+  ++ + G  P+   YN+LI+GFC
Sbjct: 440 F--------------SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +V   + A++++ ++   G  P  +TY TLI+GL + ++ ++A  +  +M +NG TP   
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y SL+      +K   A S+W Q                   L KG         L++D
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQ------------------ILYKG---------LKVD 578

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRG 684
             +       + I + GLC  G+V EAL++FS + E K    PP+ V    L+ GL + G
Sbjct: 579 VMM-------HNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGLYETG 629

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           Y+D A  ++    ++G  L P + +Y  R
Sbjct: 630 YIDKAATLWTSITEDG--LEPDIISYNTR 656



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 261/519 (50%), Gaps = 38/519 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D LR   V+     +  L+ G  K    + AL+   +M     QPDV  YNA+L   F+
Sbjct: 181 FDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFK 240

Query: 146 KQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
              F   + V+ ++VK     PN+ T++++++GL K G+ +   ++ + M    + P+  
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY I+I GLC+    D A R++ ++  +G   D   YN+L+ GFC+  RV EA    + +
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA---WKFW 357

Query: 265 EKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSE 320
           +  GF  +  L +Y+ +I GLF +   DEA   +  + E+ +   PD V +G +I GL +
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQ 416

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G    A  +  + R  G   D + Y+++I G C++G L  A  +  ++ K    PN+H 
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHI 476

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           +  LI G C+     DA ++++KM   GC P+V  +N LIDGLCKA + ++A+ +  +M 
Sbjct: 477 YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536

Query: 440 EIGKNP--TLFLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIH 478
           E G  P  T +  L +G     ++ D  S+                  ++   C+AG + 
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596

Query: 479 KAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           +A  +   + E  N  P+++TYN+L++G  + G I+ A  L+  +   GL PD ++Y T 
Sbjct: 597 EALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTR 656

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           I GL   DR  +  ++  ++   G  P      +++TW+
Sbjct: 657 IKGLCSCDRIHEGIQLLDEVLSRGIIP------TVITWN 689



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 183/333 (54%), Gaps = 2/333 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + ++I G +  G  ++A+E +  + K+  C PD   +  +++   +      A  ++ E
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
                   ++ ++S +INGL   G+   A+K+ ++M + G  PN   Y  +ISG CQ+ R
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A R++ KM D+GCSP  + YN L++G CK  +  EA ++ R   ++GF P + +Y  
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER- 337
           LI GLF  K+ D+A + ++++  + ++ DV+++ ++I GL  AGKV +A+ + SDM+E+ 
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
              P+   YN L+ G  + G +D+A +L   I +    P+  ++   I G+C    + + 
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEG 669

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +L +++   G  P+V  +N L+  + K G ++
Sbjct: 670 IQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 224/455 (49%), Gaps = 18/455 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + A+ + ++  L K   F    +  + + + N+      + +LI G  + GD + A   +
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++ +     D  +YN+++   F +   +     +++      L N+ T++++I GL  S
Sbjct: 323 SEIIKTGLVIDAAMYNSLVK-GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 182 GKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           G  + AI++ D + +    +P+  T+  +I GLCQ   A++A+ +F + + SG   D  +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y++++NG C + R+ +A+ +    +KDG  P    Y+ LI G  +  R  +A   Y KM 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +    P V+ Y  +I GL +A K ++A  +  +M E G  PD   Y +LI+G      +D
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNAL 419
            A S+  +I  +    +     ILI G+C  G VD+A  +F+ M EK  C P++  +N L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +DGL + G ++KA  L+  + E G  P              D  S  T ++  C+   IH
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEP--------------DIISYNTRIKGLCSCDRIH 667

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           +  ++L ++   G +P +IT+N L+    K G I 
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 224/498 (44%), Gaps = 32/498 (6%)

Query: 236 PDFVAYNAL--LNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEA 292
           P F    AL  L+ F +    D AL   R+     G  P + S++ L+D   RA+R+ +A
Sbjct: 79  PRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138

Query: 293 YAWYRKM----FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            A++  +    F  +I P++  Y +++R L   G +  A+ L   +R R + PD   Y+ 
Sbjct: 139 DAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYST 198

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK-A 407
           L+ G      LD A  L  E+ +    P+   +  L+ G  + G  +   ++++K+ K  
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P++  +N ++DGLCK G  ++   ++ +M                N   D  +   +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERM-------------VANNLQPDVITYGIL 305

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C +G +  A ++  ++ ++G + D   YNSL+ GFC+ G +  A K +      GL
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL 365

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAF 586
           R +  TY  +I GL      ++A  ++  + ++  C P    + +L+   C+    + AF
Sbjct: 366 R-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAF 424

Query: 587 SLWLQYLRDISGR--DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           +++ +    +SG+  D  S  S I      G + +A++   +MD          Y   + 
Sbjct: 425 TIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G CQ  +  +A+ I+S + +     T  +   LI GLCK      A  V    ++NGF  
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT- 541

Query: 704 RPRVCNY--LLRSLLFSK 719
            P +  Y  L+R L   K
Sbjct: 542 -PDITTYGSLIRGLFSDK 558


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/498 (33%), Positives = 247/498 (49%), Gaps = 35/498 (7%)

Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L +  KMK+FD                ++Y YN ++N   R+     ALA+  +M+KL
Sbjct: 70  KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL 129

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+IVT + L+NG     +   A+ ++D+M + G  P+  T+T ++ GL Q N+A EA
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   GC PD V Y A++NG CK    D AL LL   EK      +  YS +ID 
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + +  D+A   + +M  + I PDV  Y  +I  L   G+  DA +LLSDM ER I P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +N+LI  F   G L +A  L  E+ +R   PN  T+  LI G C +  +D+AQ++F 
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPTL------FLRLS 452
            M    C P V  +N LI+G CKA ++     LF  M     +G   T       F + S
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429

Query: 453 QGGNR-----------VH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
              N            VH +  +  T+++  C  G + KA  +   L +S   PDI TYN
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +  G CK G +     LF  L LKG++PD + Y T+I+G  +   +E+A+ +F +M ++
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549

Query: 561 GCTPSPAVYKSLMTWSCR 578
           G  P    Y +L+    R
Sbjct: 550 GPLPDSGTYNTLIRAHLR 567



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 178/619 (28%), Positives = 305/619 (49%), Gaps = 60/619 (9%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           NA+L++   +     A+ ++ EMVK    P+IV FS L++ ++K  K ++ I   ++M  
Sbjct: 39  NALLHLKLDE-----AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G+  N +TY I+I+ LC+ ++   A  +  KM   G  P  V  N+LLNGFC   R+ E
Sbjct: 94  LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+AL+    + G+ P   +++ L+ GLF+  +  EA A   +M  +  +PD+V YG +I 
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G+   A+ LL+ M +  I  D   Y+ +I   C    +D A +L  E+  +   P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  T++ LI  +C  G   DA +L + M +    P+V  FN+LID   K G+L +A  LF
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +M         ++ S   N V    +  +++  +C    + +A +I   +     LPD+
Sbjct: 334 DEM---------IQRSIDPNIV----TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TYN+LINGFCK   +   ++LF+++  +GL  ++VTY TLI+G  +    ++A  +F Q
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M  +G  P+   Y +L+   C+  K   A  ++                   E+LQK ++
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-------------------EYLQKSKM 481

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-- 674
           E  I                 Y I   G+C+ G+V++  ++F  L   K +   P  +  
Sbjct: 482 EPDIY---------------TYNIMSEGMCKAGKVEDGWDLFCSL-SLKGV--KPDVIAY 523

Query: 675 -KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             +I G CK+G  + A  +F+   ++G +      N L+R+ L  +D  K  +  L+  M
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIKEM 581

Query: 734 KSVGYDLDACLYPKTKSLL 752
           +S  +  DA  Y     +L
Sbjct: 582 RSCRFAGDASTYGLVTDML 600



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 193/372 (51%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           AVI+ L K    DL    L+++  G +     ++  +I    K    + AL  F +M   
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +PDV+ Y+++++       +  A  +  +M++    PN+VTF+ LI+  +K GK   A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM QR I PN  TY  +I+G C  +R DEA ++F  M    C PD V YN L+NG
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK ++V + + L R   + G V    +Y+ LI G F+A   D A   +++M  + + P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y  ++ GL + GK++ AM +   +++  + PD Y YN + +G C  G ++    L  
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   P+   +  +I G C+ G+ ++A  LF KM++ G  P  G +N LI    + G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569

Query: 428 ELEKANLLFYKM 439
           +   +  L  +M
Sbjct: 570 DKAASAELIKEM 581



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 179/370 (48%), Gaps = 8/370 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
           S VI  L K    D       E+   N  +  DVF    LIS     G    A      M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEM--DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E    P+V  +N++++   ++   + A  ++ EM++ +  PNIVT++ LING     + 
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++   M  +  LP+  TY  +I+G C+  +  +   LF  M   G   + V Y  L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++GF +    D A  + +    DG  P + +Y+ L+DGL +  + ++A   +  + + K+
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EPD+  Y +M  G+ +AGKV+D   L   +  +G+ PD   YN +I GFC  GL ++A +
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK---AGCFPSVGMFNALI- 420
           L +++ +   LP++ T+  LI    R+G    + +L  +M     AG   + G+   ++ 
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 601

Query: 421 DGLCKAGELE 430
           DG    G LE
Sbjct: 602 DGRLDKGFLE 611



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 177/415 (42%), Gaps = 29/415 (6%)

Query: 303 KIEPDVVLYGVMIRGLSEAG-------------KVKDAMKLLSDMRERGIVPDTYCYNAL 349
           K  P   L G+   GLS  G             K+ +A+ L  +M +    P    ++ L
Sbjct: 12  KASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKL 71

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +     +   D   S   ++       N +T+ I+I  +CR   +  A  +  KM K G 
Sbjct: 72  LSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGY 131

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            PS+   N+L++G C    + +A  L  +M E+G  P              D  +  T+V
Sbjct: 132 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP--------------DTVTFTTLV 177

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
                     +A  ++ ++   G  PD++TY ++ING CK G  + AL L  +++   + 
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            D V Y T+I+ L +    +DA  +F +M   G  P    Y SL++  C   ++S A  L
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297

Query: 589 WLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
               L R I+         I+ F ++G++  A +   EM  +  D  +  Y   + G C 
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             ++ EA  IF+++V    +    +   LI+G CK   +   M++F    + G +
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 40/267 (14%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++  T+ +   K K    G   F   ++R  + +  + + +I    + +  D       +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V      +  L+ G  K G  EKA+  F  +++   +PD+Y YN           
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN----------- 489

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                                   ++  G+ K+GK E    +   ++ +G+ P+   Y  
Sbjct: 490 ------------------------IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEK 266
           +ISG C+    +EAY LF+KMK+ G  PD   YN L+     LR  D+A +  L++    
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIKEMRS 583

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             F     +Y  + D +    R D+ +
Sbjct: 584 CRFAGDASTYGLVTD-MLHDGRLDKGF 609


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 281/568 (49%), Gaps = 35/568 (6%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAVY 156
           S VF +++    +V    KAL      K +   P V  YNA+L+   R KQ   +A  ++
Sbjct: 132 SAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIF 191

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EMV+    PN+ T+++LI G   +G  E+ +    EM + G LPN  TY  +I   C++
Sbjct: 192 KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            +  EA++L   M   G +P+ ++YN ++NG C+  ++ E   +L    K  +VP   ++
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+G      + +A   + +M +  + P+VV Y  +I  + +AG +  AM+ L  MR+
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG+ P+   Y  LI GF   G L QA  +  E+ +    P   T+  LI G C  G ++D
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGG 455
           A  L  +M + G  P V  ++ +I G C+  ELEKA  L  +M   G +P          
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP---------- 481

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+  ++++  C    + +   +  ++   G  PD +TY SLIN +C  G+++ A
Sbjct: 482 ----DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L+L  E+  KG  PD VTY  LING  +  R ++A R+  ++      P+   Y +L+  
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID- 596

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           +C   +F  A +L   +   + G  +E+ + +E  LQKG             +KLN+   
Sbjct: 597 NCNNLEFKSALALMKGFC--MKGLMNEADRVLESMLQKG-------------YKLNE--- 638

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVE 663
             Y + + G  + G +++A N++  ++ 
Sbjct: 639 EVYNVIIHGHSKVGNIEKAYNLYKEMLH 666



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 254/505 (50%), Gaps = 38/505 (7%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    VS     + +LI G+   G+ E  L  FG+M+   C P+V  YN +++ A+ K 
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID-AYCK- 250

Query: 148 LFLLALAVYYEMVKLNCL----PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             L  +   +++++L  L    PN+++++++INGL + G+ +   ++L+EM++R  +P++
Sbjct: 251 --LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDR 308

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I+G C +    +A  L  +M  +G SP+ V Y  L+N  CK   ++ A+  L  
Sbjct: 309 VTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P   +Y+ LIDG  +     +AY   ++M E    P ++ Y  +I G    G+
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           ++DA  LL +M ERG +PD   Y+ +I GFC    L++A  L+VE+  +   P+  T++ 
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI G+C+   + +   LF +M   G  P    + +LI+  C  G+L+KA  L  +M + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P              D  +   ++  +       +A ++L++L    ++P+ ITYN+L
Sbjct: 549 FSP--------------DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594

Query: 503 IN---------------GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           I+               GFC  G +N A ++ + +  KG + +   Y  +I+G  +V   
Sbjct: 595 IDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNI 654

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSL 572
           E A+ ++ +M  +G  P      +L
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 270/565 (47%), Gaps = 44/565 (7%)

Query: 216 INRADEAYR-LFLKMKDS--GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           +N  DE    LF  +K+S   C      ++ ++    ++  +++AL+++   +  GF+P 
Sbjct: 107 VNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPG 166

Query: 273 LGSYSCLIDGLFRAKRYDE-AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + SY+ ++D + R K+  + A   +++M E  + P+V  Y ++IRG   AG ++  +   
Sbjct: 167 VLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFF 226

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M   G +P+   YN +I  +C L  + +A  L   +  +   PN  ++ ++I G+CR 
Sbjct: 227 GEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCRE 286

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP----- 445
           G + +  ++  +M K    P    FN LI+G C  G   +A +L  +M + G +P     
Sbjct: 287 GQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTY 346

Query: 446 -TLFLRLSQGGN---------RVHDKA------SLQTMVEQYCTAGLIHKAYKILMQLAE 489
            TL   + + GN         ++ D+       +  T+++ +   G + +AY+I+ ++ E
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +G  P IITYN+LING C +G +  A  L +E+  +G  PD V+Y T+I+G  R    E 
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEK 466

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IE 608
           AF++  +M   G +P  A Y SL+   C++R+      L+ + L      D+ +  S I 
Sbjct: 467 AFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLIN 526

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI----------- 657
            +  +G+++ A++   EM  K     +  Y + + G  +  + KEA  +           
Sbjct: 527 AYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVP 586

Query: 658 ----FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
               ++ L++    +   S + L+ G C +G ++ A  V    L+ G+ L   V N ++ 
Sbjct: 587 NEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIH 646

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGY 738
               SK      AY+L   M   G+
Sbjct: 647 G--HSKVGNIEKAYNLYKEMLHSGF 669



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 15/344 (4%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +Q + E+     +     +  LI+G+  +G  E A     +M E    PDV  Y+ +++ 
Sbjct: 398 YQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISG 457

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R Q    A  +  EMV     P++ T+S LI GL K  +      +  EM   G+ P+
Sbjct: 458 FCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPD 517

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           + TYT +I+  C     D+A RL  +M   G SPD V YN L+NGF K  R  EA  LL 
Sbjct: 518 EVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLL 577

Query: 263 SFEKDGFVPRLGSYSCLID---------------GLFRAKRYDEAYAWYRKMFEEKIEPD 307
               +  VP   +Y+ LID               G       +EA      M ++  + +
Sbjct: 578 KLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
             +Y V+I G S+ G ++ A  L  +M   G  P +    AL K     G   +   L  
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
              K   +       +LI    + G +D    +   M  +G  P
Sbjct: 698 YTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/479 (34%), Positives = 249/479 (51%), Gaps = 13/479 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      D+Y YN ++N   R+    LALAV  +M+
Sbjct: 83  FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT S L+NG     +   A+ ++D+M      PN  T+  +I GL   N+A 
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD   Y  ++NG CK   +D AL+LL+  EK      +  Y+ +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L   K  ++A   + +M  + I P+VV Y  +IR L   G+  DA +LLSDM ER I 
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M    CFP+V  +N LI G CKA  +E+       ME      LF  +SQ G  V +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 429

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T+++    AG    A KI  ++   G  PDIITY+ L++G CK G +  AL +F+
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            LQ   + PD  TY  +I G+ +  + ED + +F  +   G  P+  +Y ++++  CR+
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 261/529 (49%), Gaps = 13/529 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    + + L S    + ++S + K N FDL     + +++  +S     + +LI+ + 
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +PD+   +++LN     +    A+A+  +M  +   PN V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M  RG  P+ FTY  V++GLC+    D A  L  KM
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +      D V Y  +++  C  + V++AL L    +  G  P + +Y+ LI  L    R+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GFC    LD+A+ +   +  +D  PN  T+  LI G C+   V++  +LF +M + G 
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +   +N LI GL +AG+ + A  +F KM     P              D  +   +++
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------------DIITYSILLD 473

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + KA  +   L +S   PDI TYN +I G CK G +     LF  L LKG++P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + + Y T+I+G  R   +E+A  +F +M ++G  P+   Y +L+    R
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 203/397 (51%), Gaps = 8/397 (2%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL    L ++  G +     ++  +I       +   AL  F +M   
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +P+V  YN+++        +  A  +  +M++    PN+VTFS LI+   K GK   A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM +R I P+ FTY+ +I+G C  +R DEA  +F  M    C P+ V YN L+ G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + L R   + G V    +Y+ LI GLF+A   D A   ++KM  + + PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL + GK++ A+ +   +++  + PD Y YN +I+G C  G ++    L  
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN   +T +I G CR G+ ++A  LF +M++ G  P+ G +N LI    + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584

Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
           +   +  L  +M     +G   T+ + +    N +HD
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVI----NMLHD 617



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 271/585 (46%), Gaps = 64/585 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +  EM Q   LP+   +  ++S + ++N+ D    L  +M++   S D  +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+N FC+  ++  ALA+L    K G+ P + + S L++G    KR  EA A   +MF  
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           + +P+ V +  +I GL    K  +A+ L+  M  RG  PD + Y  ++ G C  G +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  ++ K     +   +T +I  +C    V+DA  LF +M+  G  P+V  +N+LI  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---------GNRVHDKA-------- 462
           LC  G    A+ L   M   +I  N   F  L              +++D+         
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++  +C    + +A  +   +      P+++TYN+LI GFCK   +   ++LF+
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  +GL  ++VTY TLI GL +    + A +IF +M  +G  P    Y  L+   C+  
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
           K   A  ++                   E+LQK ++E  I                 Y I
Sbjct: 480 KLEKALVVF-------------------EYLQKSKMEPDIY---------------TYNI 505

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
            + G+C+ G+V++  ++F  L   K +   P+ +    +I G C++G  + A  +F    
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSL-SLKGV--KPNVIIYTTMISGFCRKGLKEEADALFREMK 562

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           ++G +      N L+R+ L  +D  K  +  L+  M+S G+  DA
Sbjct: 563 EDGTLPNSGTYNTLIRARL--RDGDKAASAELIKEMRSCGFVGDA 605



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   ++ S  V     
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K G  EKAL  F  +++   +PD+Y YN                      
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN---------------------- 504

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ PN   YT +ISG C+    
Sbjct: 505 -------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  P+   YN L+    +LR  D+A +  L++     GFV    + S
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 609

Query: 278 CLIDGLFRAKRYDEAY 293
            +I+ +    R +++Y
Sbjct: 610 MVIN-MLHDGRLEKSY 624


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 189/629 (30%), Positives = 309/629 (49%), Gaps = 39/629 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G        +A + F  MK+  C+PD   Y  ++    +     +AL ++ EM+
Sbjct: 273 YSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332

Query: 161 K------LNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
                  + C+ P++ T S+LI+ L K GK   A ++L+ M QRG + +  TY+ +I GL
Sbjct: 333 NDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 392

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG----- 268
           C  +R  EA  LF+ M+  GC PD + Y  L+ G C+   ++ AL L +    D      
Sbjct: 393 CMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGI 452

Query: 269 -FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P L SYS +IDGL + +R DEA   + +M  + I PDV+ Y  +I G   +GK + A
Sbjct: 453 KCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKA 512

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             L ++M + GI PD    + LI   C  G + +A  L   + +R  + +  T T L+ G
Sbjct: 513 KCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG 572

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C    +  A +LF KM+K GC P+V     L+ GLC++G ++ A  L   M    +P  
Sbjct: 573 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP-- 630

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                 G N   +  S   +++  C  G   +A ++  ++   G +PD+I+Y SLI+GFC
Sbjct: 631 -----YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFC 685

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G    A  LF E+   G++PD  T+  LI+ L +  +  +A  +   M Q GC P+  
Sbjct: 686 RSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTV 745

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQ----- 621
            Y +L+   C   + S A  L+++  +     D  +  ++ + L Q G ++ A++     
Sbjct: 746 TYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM 805

Query: 622 ----GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-- 675
               G    +FK +   +  Y+I + GLC+ G+  EA  +F    E KA+   P+ +   
Sbjct: 806 LSDTGQYGTNFKPD---VISYSIIIDGLCKHGREDEARELFK---EMKALGVIPNVISYT 859

Query: 676 -LIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
            LIHG C+ G L+ A  +F   +  G  L
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 191/681 (28%), Positives = 321/681 (47%), Gaps = 62/681 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS---------LLINGLSKS 181
           PD + +N ++N     +     LA    +++   +P+IVT+S         +LI+ L K 
Sbjct: 8   PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK   A ++L+ M QRG + +  TY+ +I GLC  +R  EA  LF+ M+  GC PD + Y
Sbjct: 68  GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDG------FVPRLGSYSCLIDGLFRAKRYDEAYAW 295
             L+ G C+   ++ AL L +    D         P L SYS +IDGL + +R DEA   
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +++M  + + PDV+ Y  +I G   +GK + A  L ++M + GI PD      LI  FC 
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G + +A  L   +  R  + +  T++ LI G+C    + +A +LF  M+K GC P    
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 416 FNALIDGLCKAGELEKANLLFYKM--------------EIGKNPTLFLRLSQGGNRVHDK 461
           +  L+ GLC+ G++  A  L  +M              ++  +  L   L + G  +   
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367

Query: 462 ASLQTMVEQYCTAGL---------------IHKAYKILMQLAESGNLPDIITYNSLINGF 506
             L+ M+++ C   +               I +A  + M + + G  PD ITY +L+ G 
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427

Query: 507 CKVGNINGALKLFKE-LQLKG-----LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           C+ GNIN AL+L +E L   G      +P  ++Y  +I+GL +  RE++A  +F +M   
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ 487

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVEN 618
           G  P    Y +L+   C   K+  A  L+ + L D+  + D +  S  I+   +KG+V  
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML-DVGIQPDVTTSSVLIDMLCKKGKVIE 546

Query: 619 AIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           A   LLE+  +      +   T  + GLC   ++ +A  +F  + +   +    +C  L+
Sbjct: 547 A-NKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLM 605

Query: 678 HGLCKRGYLDLAMDVFLYTLKN----GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            GLC+ G + +A+++    L +    G   +P   +Y +      K  ++  A  L   M
Sbjct: 606 KGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEM 665

Query: 734 KSVGYDLDACLYPKTKSLLPG 754
           K++G   D   Y    SL+ G
Sbjct: 666 KALGVIPDVISYT---SLIHG 683



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/466 (32%), Positives = 245/466 (52%), Gaps = 15/466 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  K    ++A E F +MK     PDV  Y  +++       +  A  ++ EM+
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +   P++ T S+LI+ L K GK   A K+L+ + QRG + +  T T ++ GLC  +R  
Sbjct: 521 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRIS 580

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD------GFVPRLG 274
           +A +LFLKM+  GC P+ V    L+ G C+   +  AL L ++   D         P   
Sbjct: 581 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 640

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SYS +IDGL +  R DEA   +++M    + PDV+ Y  +I G   +GK KDA  L ++M
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G+ PD   ++ LI   C  G + +A  L   + +R  +PNT T+T L+ G+C N  +
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            +A +LF KM+K GC P V  +  L+ GLC+ G ++ A  L  KM       L      G
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKM-------LSDTGQYG 813

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
            N   D  S   +++  C  G   +A ++  ++   G +P++I+Y SLI+GFC+ G +  
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           A  LF E+  +G++ ++VTY  +I+G  +  + + A  +F +M  N
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 193/786 (24%), Positives = 343/786 (43%), Gaps = 127/786 (16%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G        +A   F  M++  C+PD   Y  ++    +     +AL ++ EM+
Sbjct: 92  YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 151

Query: 161 K------LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
                  + C P ++++S++I+GL K  + + A ++  EM  +G++P+  +YT +I G C
Sbjct: 152 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFC 211

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
              + ++A  LF +M D G  PD      L++ FCK  +V EA  LL      G +  + 
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIV 271

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK--------- 325
           +YS LI GL    R  EA   +  M +    PD + YG +++GL + GK+          
Sbjct: 272 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 331

Query: 326 ---------------------------------DAMKLLSDMRERGIVPDTYCYNALIKG 352
                                            +A +LL  M +RG + D   Y+ LIKG
Sbjct: 332 LNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 391

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV------------------ 394
            C    + +A  L + + K    P+  T+  L+ G+C+ G +                  
Sbjct: 392 LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYG 451

Query: 395 -----------------------DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
                                  D+A++LF +M+  G  P V  +  LI G C +G+ EK
Sbjct: 452 IKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEK 511

Query: 432 ANLLFYKM-EIGKNP------TLFLRLSQGGNRVHDKASLQTMVEQYC----------TA 474
           A  LF +M ++G  P       L   L + G  +     L+ ++++ C            
Sbjct: 512 AKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVK 571

Query: 475 GL-----IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK---- 525
           GL     I KA ++ +++ + G +P+++T  +L+ G C+ GNI  AL+L K +       
Sbjct: 572 GLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPY 631

Query: 526 --GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
               +P++++Y  +I+GL +  RE++A  +F +M   G  P    Y SL+   CR  K+ 
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 584 LAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
            A  L+ + + DI  + D +  S  I+   ++G+V  A + L  M  +        YT  
Sbjct: 692 DAKYLFNEMV-DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 750

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN-- 699
           + GLC + ++ EA  +F  + +   +    +   L+ GLC+ G +  A+++    L +  
Sbjct: 751 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 810

Query: 700 --GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWN 757
             G   +P V +Y +      K  ++  A  L   MK++G   +   Y    SL+ G   
Sbjct: 811 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT---SLIHGFCR 867

Query: 758 TREMEN 763
           + ++E+
Sbjct: 868 SGKLED 873



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 236/468 (50%), Gaps = 27/468 (5%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  S S +I  L K    D   +  +E+++  +      +  LI G+   G  EKA   F
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M +   QPDV   + ++++  +K   + A  +   +++  C+ ++VT + L+ GL   
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSG-----CS 235
            +   A ++  +M + G +PN  T   ++ GLCQ      A  L   M  D+      C 
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ ++Y+ +++G CK  R DEA  L +  +  G +P + SY+ LI G  R+ ++ +A   
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M +  ++PDV  + V+I  L + GKV +A +LL  M +RG +P+T  Y  L+KG C 
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCF---- 410
              + +A  L +++ K   LP+  T+  L+ G+C+ G +  A +L  KM    G +    
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNF 816

Query: 411 -PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P V  ++ +IDGLCK G  ++A  LF +M+ +G  P +               S  +++
Sbjct: 817 KPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI--------------SYTSLI 862

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
             +C +G +  A  +  ++ + G   + +TY+ +I+GFCK G I+ AL
Sbjct: 863 HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 258/573 (45%), Gaps = 58/573 (10%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY---------NAL 244
           M   G+ P+ FT+ I+I+ LC + R +E       +   G  PD V Y         + L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  CK  +V EA  LL    + G +  + +YS LI GL    R  EA   +  M +   
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKL----LSDMRERGI--VPDTYCYNALIKGFCDLGL 358
            PD + YG +++GL + G +  A++L    L+D    GI   P    Y+ +I G C    
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            D+AR L  E+  +  +P+  ++T LI G C +G  + A+ LFN+M   G  P V     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           LID  CK G++ +AN L   M           + +G   + D  +  T+++  C    I 
Sbjct: 241 LIDMFCKEGKVIEANELLEVM-----------VHRGC--ILDIVTYSTLIKGLCMKHRIS 287

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL-------QLKGLRPDS 531
           +A ++ M + + G  PD I Y +L+ G C+ G IN AL L +E+        +K +RPD 
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            T   LI+ L +  +  +A  +   M Q GC      Y +L+   C   + S A  L++ 
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 592 YLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDF---------QLAPYTI 640
            ++ +  R D       ++   Q G +  A+Q   EM   LND           L  Y+I
Sbjct: 408 -MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM---LNDTGRYGIKCKPTLISYSI 463

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTL 697
            + GLC+D +  EA  +F    E KA    P  +    LIHG C  G  + A  +F   L
Sbjct: 464 IIDGLCKDRREDEARELFE---EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
             G  ++P V    +   +  K  K + A  LL
Sbjct: 521 DVG--IQPDVTTSSVLIDMLCKKGKVIEANKLL 551


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/629 (29%), Positives = 312/629 (49%), Gaps = 76/629 (12%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            V++S + +    + AL++F  +     C P +  +NA+L+   R + F  A A +  + 
Sbjct: 87  LVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS 146

Query: 161 K----LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
                    PN+ T+++++  L   G  + A+ + D + +R + P++ TY+ ++ GL + 
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGS 275
           +R D A  L  +M  S   PD V YNALL G  K    ++ + +     KD G  P L +
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++DGL +  R+ E    + +M    ++PDV+ YG++I GL  +G V  A ++ S++ 
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDS-----LPNTHTFTILICGMC 389
           + G+V D   YN+L+KGFC  G + +A       WK  DS     L N  T+ I+I G+ 
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEA-------WKFWDSAGFAGLRNLRTYNIMIKGLF 379

Query: 390 RNGMVDDAQKLFNKMEK-AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL 447
            +GMVD+A +L++ +EK   C P    F  LI GLC+ G   KA  +F +  + GK   +
Sbjct: 380 DSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDV 439

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F              S  +M+   C  G +  A K+  ++ + G  P+   YN+LI+GFC
Sbjct: 440 F--------------SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +V   + A++++ ++   G  P  +TY TLI+GL + ++ ++A  +  +M +NG TP   
Sbjct: 486 QVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDIT 545

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y SL+      +K   A S+W Q                   L KG         L++D
Sbjct: 546 TYGSLIRGLFSDKKIDDALSIWKQ------------------ILYKG---------LKVD 578

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRG 684
             +       + I + GLC  G+V EAL++FS + E K    PP+ V    L+ GL + G
Sbjct: 579 VMM-------HNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGLYETG 629

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           Y+D A  ++    ++G  L P + +Y  R
Sbjct: 630 YIDKAATLWTSITEDG--LEPDIISYNTR 656



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 261/519 (50%), Gaps = 38/519 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D LR   V+     +  L+ G  K    + AL+   +M     QPDV  YNA+L   F+
Sbjct: 181 FDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFK 240

Query: 146 KQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
              F   + V+ ++VK     PN+ T++++++GL K G+ +   ++ + M    + P+  
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY I+I GLC+    D A R++ ++  +G   D   YN+L+ GFC+  RV EA    + +
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA---WKFW 357

Query: 265 EKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSE 320
           +  GF  +  L +Y+ +I GLF +   DEA   +  + E+ +   PD V +G +I GL +
Sbjct: 358 DSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQ 416

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G    A  +  + R  G   D + Y+++I G C++G L  A  +  ++ K    PN+H 
Sbjct: 417 NGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHI 476

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           +  LI G C+     DA ++++KM   GC P+V  +N LIDGLCKA + ++A+ +  +M 
Sbjct: 477 YNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536

Query: 440 EIGKNP--TLFLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIH 478
           E G  P  T +  L +G     ++ D  S+                  ++   C+AG + 
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596

Query: 479 KAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           +A  +   + E  N  P+++TYN+L++G  + G I+ A  L+  +   GL PD ++Y T 
Sbjct: 597 EALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTR 656

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           I GL   DR  +  ++  ++   G  P      +++TW+
Sbjct: 657 IKGLCSCDRIHEGIQLLDEVLSRGIIP------TVITWN 689



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 183/333 (54%), Gaps = 2/333 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + ++I G +  G  ++A+E +  + K+  C PD   +  +++   +      A  ++ E
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
                   ++ ++S +INGL   G+   A+K+ ++M + G  PN   Y  +ISG CQ+ R
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A R++ KM D+GCSP  + YN L++G CK  +  EA ++ R   ++GF P + +Y  
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER- 337
           LI GLF  K+ D+A + ++++  + ++ DV+++ ++I GL  AGKV +A+ + SDM+E+ 
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
              P+   YN L+ G  + G +D+A +L   I +    P+  ++   I G+C    + + 
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEG 669

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +L +++   G  P+V  +N L+  + K G ++
Sbjct: 670 IQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 224/455 (49%), Gaps = 18/455 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + A+ + ++  L K   F    +  + + + N+      + +LI G  + GD + A   +
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++ +     D  +YN+++   F +   +     +++      L N+ T++++I GL  S
Sbjct: 323 SEIIKTGLVIDAAMYNSLVK-GFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 182 GKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           G  + AI++ D + +    +P+  T+  +I GLCQ   A++A+ +F + + SG   D  +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y++++NG C + R+ +A+ +    +KDG  P    Y+ LI G  +  R  +A   Y KM 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +    P V+ Y  +I GL +A K ++A  +  +M E G  PD   Y +LI+G      +D
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNAL 419
            A S+  +I  +    +     ILI G+C  G VD+A  +F+ M EK  C P++  +N L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +DGL + G ++KA  L+  + E G  P              D  S  T ++  C+   IH
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEP--------------DIISYNTRIKGLCSCDRIH 667

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           +  ++L ++   G +P +IT+N L+    K G I 
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 224/498 (44%), Gaps = 32/498 (6%)

Query: 236 PDFVAYNAL--LNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEA 292
           P F    AL  L+ F +    D AL   R+     G  P + S++ L+D   RA+R+ +A
Sbjct: 79  PRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138

Query: 293 YAWYRKM----FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            A++  +    F  +I P++  Y +++R L   G +  A+ L   +R R + PD   Y+ 
Sbjct: 139 DAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST 198

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK-A 407
           L+ G      LD A  L  E+ +    P+   +  L+ G  + G  +   ++++K+ K  
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P++  +N ++DGLCK G  ++   ++ +M                N   D  +   +
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERM-------------VANNLQPDVITYGIL 305

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C +G +  A ++  ++ ++G + D   YNSL+ GFC+ G +  A K +      GL
Sbjct: 306 IHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL 365

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAF 586
           R +  TY  +I GL      ++A  ++  + ++  C P    + +L+   C+    + AF
Sbjct: 366 R-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAF 424

Query: 587 SLWLQYLRDISGR--DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           +++ +    +SG+  D  S  S I      G + +A++   +MD          Y   + 
Sbjct: 425 TIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALIS 482

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G CQ  +  +A+ I+S + +     T  +   LI GLCK      A  V    ++NGF  
Sbjct: 483 GFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT- 541

Query: 704 RPRVCNY--LLRSLLFSK 719
            P +  Y  L+R L   K
Sbjct: 542 -PDITTYGSLIRGLFSDK 558


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/479 (34%), Positives = 249/479 (51%), Gaps = 13/479 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      D+Y YN ++N   R+    LALAV  +M+
Sbjct: 67  FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 126

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT S L+NG     +   A+ ++D+M      PN  T+  +I GL   N+A 
Sbjct: 127 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 186

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD   Y  ++NG CK   +D AL+LL+  EK      +  Y+ +I
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 246

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L   K  ++A   + +M  + I P+VV Y  +IR L   G+  DA +LLSDM ER I 
Sbjct: 247 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 306

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   ++ALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 366

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M    CFP+V  +N LI G CKA  +E+       ME      LF  +SQ G  V +
Sbjct: 367 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEG------ME------LFREMSQRG-LVGN 413

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T+++    AG    A KI  ++   G  PDIITY+ L++G CK G +  AL +F+
Sbjct: 414 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 473

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            LQ   + PD  TY  +I G+ +  + ED + +F  +   G  P+  +Y ++++  CR+
Sbjct: 474 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 261/529 (49%), Gaps = 13/529 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    + + L S    + ++S + K N FDL     + +++  +S     + +LI+ + 
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +PD+   +++LN     +    A+A+  +M  +   PN V
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M  RG  P+ FTY  V++GLC+    D A  L  KM
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +      D V Y  +++  C  + V++AL L    +  G  P + +Y+ LI  L    R+
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GFC    LD+A+ +   +  +D  PN  T+  LI G C+   V++  +LF +M + G 
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +   +N LI GL +AG+ + A  +F KM     P              D  +   +++
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-------------DIITYSILLD 457

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + KA  +   L +S   PDI TYN +I G CK G +     LF  L LKG++P
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + + Y T+I+G  R   +E+A  +F +M ++G  P+   Y +L+    R
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 566



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 203/397 (51%), Gaps = 8/397 (2%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL    L ++  G +     ++  +I       +   AL  F +M   
Sbjct: 209 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +P+V  YN+++        +  A  +  +M++    PN+VTFS LI+   K GK   A
Sbjct: 269 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 328

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM +R I P+ FTY+ +I+G C  +R DEA  +F  M    C P+ V YN L+ G
Sbjct: 329 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 388

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + L R   + G V    +Y+ LI GLF+A   D A   ++KM  + + PD
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 448

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL + GK++ A+ +   +++  + PD Y YN +I+G C  G ++    L  
Sbjct: 449 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 508

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN   +T +I G CR G+ ++A  LF +M++ G  P+ G +N LI    + G
Sbjct: 509 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 568

Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
           +   +  L  +M     +G   T+ + +    N +HD
Sbjct: 569 DKAASAELIKEMRSCGFVGDASTISMVI----NMLHD 601



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 271/585 (46%), Gaps = 64/585 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +  EM Q   LP+   +  ++S + ++N+ D    L  +M++   S D  +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+N FC+  ++  ALA+L    K G+ P + + S L++G    KR  EA A   +MF  
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           + +P+ V +  +I GL    K  +A+ L+  M  RG  PD + Y  ++ G C  G +D A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  ++ K     +   +T +I  +C    V+DA  LF +M+  G  P+V  +N+LI  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---------GNRVHDKA-------- 462
           LC  G    A+ L   M   +I  N   F  L              +++D+         
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++  +C    + +A  +   +      P+++TYN+LI GFCK   +   ++LF+
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  +GL  ++VTY TLI GL +    + A +IF +M  +G  P    Y  L+   C+  
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
           K   A  ++                   E+LQK ++E  I                 Y I
Sbjct: 464 KLEKALVVF-------------------EYLQKSKMEPDIY---------------TYNI 489

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
            + G+C+ G+V++  ++F  L   K +   P+ +    +I G C++G  + A  +F    
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSL-SLKGV--KPNVIIYTTMISGFCRKGLKEEADALFREMK 546

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           ++G +      N L+R+ L  +D  K  +  L+  M+S G+  DA
Sbjct: 547 EDGTLPNSGTYNTLIRARL--RDGDKAASAELIKEMRSCGFVGDA 589



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   ++ S  V     
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K G  EKAL  F  +++   +PD+Y YN                      
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN---------------------- 488

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ PN   YT +ISG C+    
Sbjct: 489 -------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  P+   YN L+    +LR  D+A +  L++     GFV    + S
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRA--RLRDGDKAASAELIKEMRSCGFVGDASTIS 593

Query: 278 CLIDGLFRAKRYDEAY 293
            +I+ +    R +++Y
Sbjct: 594 MVIN-MLHDGRLEKSY 608


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 191/705 (27%), Positives = 323/705 (45%), Gaps = 33/705 (4%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELR-S 91
           V +V+   K+P      F    K    + +F +   +I  L     FD   + L E+R +
Sbjct: 10  VAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLN 69

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            + S++  V+   +  Y + G  ++A++ F +M  ++C+P ++ YNA++NI      F  
Sbjct: 70  VDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQ 129

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  VY  M      P++ TF++ I    ++ +   A+++L+ M  +G   N   Y  VIS
Sbjct: 130 AHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVIS 189

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  + N   EAY LF KM   G  P    +N L++  CK   + E   LL    K+G  P
Sbjct: 190 GFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCP 249

Query: 272 RLGSYSCLIDGLFRA-------KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            L +++  I GL R         +  EA  +  KM  + +EPD   Y  +I G S+ GK+
Sbjct: 250 NLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKI 309

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           +DA ++L D + +G VPD + Y +LI G C  G +D A +L  E   +   P+   +  L
Sbjct: 310 QDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTL 369

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGK 443
           I G+ + G+V  A +L N M K G  P +  +N +I+GLCK G +  A NLL   +  G 
Sbjct: 370 IKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGY 429

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P +F              +  T+++ YC    +  A  IL  +   G  PD+ITYNS++
Sbjct: 430 LPDIF--------------TFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSIL 475

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG CK       ++ FK +  KG  P+ +TY  LI  L +  +  +A  +  ++   G  
Sbjct: 476 NGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI 535

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           P P  + ++++  C       A+ L+  ++    I          I  F +K +++ A +
Sbjct: 536 PDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQK 595

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
              EM  K  D     Y + + G C+ G V    +     +E   + +  +  ++I+ LC
Sbjct: 596 LFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLC 655

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            +  +  A+ +    ++ G +    V        +F  D K V A
Sbjct: 656 VQHRVHEAVGIVHLMVRTGVVPEAVVT-------IFDADKKAVAA 693



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 3/214 (1%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++  ++ + + K   P+     F    ++  L +  + + +I  L K          L+E
Sbjct: 469 ITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEE 528

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQ 147
           +R+  +      F  +ISG+   GD ++A + F +M +++     V  YN ++N AF ++
Sbjct: 529 IRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN-AFSEK 587

Query: 148 LFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           L + +A  +++EM    C P+  T+ ++I+G  K G        L +  + G +P+  T+
Sbjct: 588 LDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
             VI+ LC  +R  EA  +   M  +G  P+ V 
Sbjct: 648 GRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 262/532 (49%), Gaps = 27/532 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            ++I  L K    D  ++ LDE+R   +     V   +I G  K G    AL  F  +  
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAG 93

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLLINGLSKSGKTE 185
             C PD+  +N +++   +      A  ++  M     CLPN+VT++ +INGL K GK +
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            AI++LD M + G  PN  TY++++ GLC+  R D+ + L  +M   G  PD + YN LL
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK RR+DEAL L++   + G  P + +Y+ L++   R+K+ D A+   + M E    
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+ Y  +I GL    ++ DA  LL  M     VPD   Y+ +I G C    +D    L
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 366 Q-----VEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           +     +E+ K+    PN  T+ ++I G+CR      A  L  +M  +   P +  F+ +
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I  LCK+ +L+ A  +F  M   E   NP  +  L  G ++                 G 
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK----------------GGE 437

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA ++   + ES   P + TYNS+++G C VG I  A+++ + +  K   PD  +YG 
Sbjct: 438 VDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           LI GL RV   E+A+ +F  +   G      VY  L+   C++++ S A  +
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 244/517 (47%), Gaps = 68/517 (13%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  LN+  R      A+ ++ E     C+PN  T+  LI+GL K+GK + A ++LDEM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 197 RGILPNKFTYTIVISGLCQI-----------------------------------NRADE 221
           RGI P    +  VI GLC+                                     R +E
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 222 AYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           A+++F  M  S  C P+ V Y  ++NG CK  ++D A+ LL    + G  P + +YS L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL +A R D+ +   ++M     +PDV++Y  ++ GL ++ ++ +A++L+  M   G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+L++ FC    +D+A  L   + +R   P+   +  +I G+CR+  +DDAQ L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCK------AGELEKANLLFYKM-EIGKNPT------- 446
             +M  A C P V  ++ +IDGLCK        +LE A  +   M + G  P        
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 447 --------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                           LR       V D +S   ++   C +  +  AYKI   ++E   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+ + Y +LI+G  K G ++ A+++F EL ++  RP   TY ++++GL  V R E+A R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +   M    C P  A Y +L+   CR      A+ L+
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 261/559 (46%), Gaps = 64/559 (11%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L +  +  +A +LF   ++  C P+   Y +L++G CK  ++D+A  LL      G  P 
Sbjct: 8   LVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +  ++ +I GL +A R+ +A  +++ +   K  PD++ + +++  L ++G+V++A ++  
Sbjct: 65  VAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 333 DMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            M      +P+   Y  +I G C  G LD+A  L   + +    PN  T+++L+ G+C+ 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
           G  D    L  +M + G  P V M+N L++GLCK+  L++A  L+   +  G  PT+   
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV-- 242

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++E +C +  + +A++++  ++E G  PD+I YN++I G C+  
Sbjct: 243 ------------TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGL---QRVDRE---EDAFRIFGQMPQNGCTP 564
            ++ A  L K++      PD +TY T+I+GL    RVD +   E A  I   M Q GC P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS------------------ 606
           +   Y  ++   CR RK   A +L L+ + D     D S  S                  
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALAL-LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409

Query: 607 -------------------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                              I+   + GEV+ A++ + E+  +     +A Y   L GLC 
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCG 468

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G+++EA+ +   ++  +      S   LI GLC+   ++ A ++F      GF +   V
Sbjct: 469 VGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGV 528

Query: 708 CNYLLRSLLFSKDNKKVHA 726
            N L+  L   K     H 
Sbjct: 529 YNVLVNELCKKKRLSDAHG 547


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 262/532 (49%), Gaps = 27/532 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            ++I  L K    D  ++ LDE+R   +     V   +I G  K G    AL  F  +  
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAG 93

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLLINGLSKSGKTE 185
             C PD+  +N +++   +      A  ++  M     CLPN+VT++ +INGL K GK +
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            AI++LD M + G  PN  TY++++ GLC+  R D+ + L  +M   G  PD + YN LL
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK RR+DEAL L++   + G  P + +Y+ L++   R+K+ D A+   + M E    
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+ Y  +I GL    ++ DA  LL  M     VPD   Y+ +I G C    +D    L
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 366 Q-----VEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           +     +E+ K+    PN  T+ ++I G+CR      A  L  +M  +   P +  F+ +
Sbjct: 334 EAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMV 393

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I  LCK+ +L+ A  +F  M   E   NP  +  L  G ++                 G 
Sbjct: 394 IGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK----------------GGE 437

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA ++   + ES   P + TYNS+++G C VG I  A+++ + +  K   PD  +YG 
Sbjct: 438 VDKAVRVFELMVESFR-PGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           LI GL RV   E+A+ +F  +   G      VY  L+   C++++ S A  +
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGV 548



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 244/517 (47%), Gaps = 68/517 (13%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  LN+  R      A+ ++ E     C+PN  T+  LI+GL K+GK + A ++LDEM  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREE---RCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 197 RGILPNKFTYTIVISGLCQI-----------------------------------NRADE 221
           RGI P    +  VI GLC+                                     R +E
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 222 AYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           A+++F  M  S  C P+ V Y  ++NG CK  ++D A+ LL    + G  P + +YS L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL +A R D+ +   ++M     +PDV++Y  ++ GL ++ ++ +A++L+  M   G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+L++ FC    +D+A  L   + +R   P+   +  +I G+CR+  +DDAQ L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCK------AGELEKANLLFYKM-EIGKNPT------- 446
             +M  A C P V  ++ +IDGLCK        +LE A  +   M + G  P        
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 447 --------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                           LR       V D +S   ++   C +  +  AYKI   ++E   
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+ + Y +LI+G  K G ++ A+++F EL ++  RP   TY ++++GL  V R E+A R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +   M    C P  A Y +L+   CR      A+ L+
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 261/559 (46%), Gaps = 64/559 (11%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L +  +  +A +LF   ++  C P+   Y +L++G CK  ++D+A  LL      G  P 
Sbjct: 8   LVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +  ++ +I GL +A R+ +A  +++ +   K  PD++ + +++  L ++G+V++A ++  
Sbjct: 65  VAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 333 DMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            M      +P+   Y  +I G C  G LD+A  L   + +    PN  T+++L+ G+C+ 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
           G  D    L  +M + G  P V M+N L++GLCK+  L++A  L+   +  G  PT+   
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV-- 242

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  +++E +C +  + +A++++  ++E G  PD+I YN++I G C+  
Sbjct: 243 ------------TYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGL---QRVDRE---EDAFRIFGQMPQNGCTP 564
            ++ A  L K++      PD +TY T+I+GL    RVD +   E A  I   M Q GC P
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS------------------ 606
           +   Y  ++   CR RK   A +L L+ + D     D S  S                  
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALAL-LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409

Query: 607 -------------------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                              I+   + GEV+ A++ + E+  +     +A Y   L GLC 
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVR-VFELMVESFRPGVATYNSVLDGLCG 468

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G+++EA+ +   ++  +      S   LI GLC+   ++ A ++F      GF +   V
Sbjct: 469 VGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGV 528

Query: 708 CNYLLRSLLFSKDNKKVHA 726
            N L+  L   K     H 
Sbjct: 529 YNVLVNELCKKKRLSDAHG 547


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 185/693 (26%), Positives = 316/693 (45%), Gaps = 21/693 (3%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLD 87
           L    V +VI    +P    + F         + +  +   +I  L     F+     L 
Sbjct: 5   LQPKHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLA 64

Query: 88  ELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           E+R   +  ++  V+  ++  Y + G  ++A+  F +M  +DC+P V  YNA++NI    
Sbjct: 65  EMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEY 124

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
             F  A  VY  M  +   P++ T ++ +     +G+   A+++L+ M  +G   N  +Y
Sbjct: 125 GYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             VISG  + N   EAY LF +M   G  PD + +N L++  CK   V E+  L     K
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P L +++  I GL R    DEA      +  E + PDV+ Y  +I G  +  K+ +
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A   L  M   G+ P+ + YN +I GFC  G++  A  +  +   +  +P+  T++ LI 
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNP 445
           G+C +G ++ A  +F +  + G   S+ ++N L+ GL K G  L+   L+   ME G +P
Sbjct: 365 GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP 424

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            ++              +   +V   C  G +  A  IL      G +PDI T+N+LI+G
Sbjct: 425 DIW--------------TYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +CK  N++ A+++   +   G+ PD +TY TL+NGL +  + ++    F  M + GCTP+
Sbjct: 471 YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPN 530

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGL- 623
              Y  L+   C+ RK S A  L+ +   R ++         I      GE++ A +   
Sbjct: 531 IITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV 590

Query: 624 -LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
            +E ++K + +  A + I +   C    V  A  +F  +          +   +I   CK
Sbjct: 591 TIEKEYKFS-YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            G +DLA    L  +  G +     C  +L  L
Sbjct: 650 TGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 171/609 (28%), Positives = 293/609 (48%), Gaps = 25/609 (4%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALE 119
           S  S +A++++L++   F    +    +R  ++ +  DV+   + +  +   G    AL 
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVY--MRMKDIGIYPDVYTHTIRMKSFCITGRPTAALR 167

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M    C+ +   Y AV++  +++   + A  ++ EM+K    P+I+TF+ LI+ L 
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G  + + K+  ++ +RG+ PN FT+ I I GLC+    DEA RL   +   G +PD +
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           +YN L+ GFCK  ++ EA   L      G  P   +Y+ +I+G  +A     A    R  
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             +   PD   Y  +I GL   G +  AM +  +  E+G       YN L+KG    GL+
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            QA  L  ++ +    P+  T+ +++ G+C+ G + DA  + N     GC P +  FN L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           IDG CK   ++KA      +EI     L   LS G     D  +  T++   C A  +  
Sbjct: 468 IDGYCKQRNMDKA------IEI-----LDTMLSHG--ITPDVITYNTLLNGLCKARKLDN 514

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
                  + E G  P+IITYN LI  FCK   ++ A++LFKE++ +GL PD VT  TLI 
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574

Query: 540 GLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           GL      + A+ +F  + +    + S A++  ++   C +   S+A  L+ +       
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCA 634

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW---LIGLCQDGQVKEA 654
            D+ + +  I+ + + G ++ A   LLE    ++   +  +T     L  LC   ++ EA
Sbjct: 635 PDNYTYRVMIDSYCKTGNIDLAHTFLLE---NISKGLVPSFTTCGKVLNCLCVTHRLSEA 691

Query: 655 LNIFSVLVE 663
           + I +++V+
Sbjct: 692 VVIINLMVQ 700



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 234/523 (44%), Gaps = 20/523 (3%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           L+   +  V+ K  N Q   + F    KR    +  + +  I  L +    D   + L+ 
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  ++     +  LI G+ K     +A     KM     +P+ + YN ++N   +  +
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +  + +    +P+  T+S LINGL   G    A+ +  E  ++G   +   Y  
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ GL +     +A +L   M + GCSPD   YN ++NG CK+  + +A  +L      G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P + +++ LIDG  + +  D+A      M    I PDV+ Y  ++ GL +A K+ + +
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                M E+G  P+   YN LI+ FC    + +A  L  E+  R   P+  T   LICG+
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 389 CRNGMVDDAQKLFNKMEKAGCFP-SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           C NG +D A +LF  +EK   F  S  +FN +I+  C    +  A  LF+KM        
Sbjct: 577 CSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM-------- 628

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                 G +   D  + + M++ YC  G I  A+  L++    G +P   T   ++N  C
Sbjct: 629 -----GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLC 683

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
               ++ A+ +   +   G+ P+ V      N +   D++E A
Sbjct: 684 VTHRLSEAVVIINLMVQNGIVPEEV------NSIFEADKKEVA 720



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 232/563 (41%), Gaps = 86/563 (15%)

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           + GK + A+ + + M      P+  +Y  +++ L +     +A++++++MKD G  PD  
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            +   +  FC   R   AL LL +    G      SY  +I G ++     EAY      
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY------ 201

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                                         L  +M ++GI PD   +N LI   C  G +
Sbjct: 202 -----------------------------HLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            ++  L  ++ KR   PN  TF I I G+CR G +D+A +L   +   G  P V  +N L
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I G CK  +L +A    +KM   G  P  F              +  T++  +C AG++ 
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEF--------------TYNTIINGFCKAGMMQ 338

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A KIL      G +PD  TY+SLING C  G++N A+ +F E   KG +   + Y TL+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
            GL +      A ++   M ++GC+P    Y  ++   C+           +  L D +G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK-----------MGCLSDANG 447

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                   + + + KG + +                +  +   + G C+   + +A+ I 
Sbjct: 448 -------ILNDAIAKGCIPD----------------IFTFNTLIDGYCKQRNMDKAIEIL 484

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             ++         +   L++GLCK   LD  +D F   L+ G    P +  Y +    F 
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG--CTPNIITYNILIESFC 542

Query: 719 KDNKKVHAYHLLCRMKSVGYDLD 741
           KD K   A  L   MK+ G   D
Sbjct: 543 KDRKVSEAMELFKEMKTRGLTPD 565


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 300/611 (49%), Gaps = 30/611 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + V+I+G  + GD ++ALE    M      PD YIY  +++   R++      ++  EM
Sbjct: 269 TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM 328

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             +   P+ V ++ LING  K      A ++ +EM  R I  N FTY  +I GLC+I   
Sbjct: 329 YTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDL 388

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  LF +M   G  PD   YN L+ G+ K++ +++A  LL   +K+           +
Sbjct: 389 EKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAI 448

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL        A   +++M    ++P++V+Y  +++GL + G+ ++A+K+L  M+++G+
Sbjct: 449 VNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGL 508

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD +CYN +I GFC  G +++ +S  VE+  +   PN +T+   I G CR G +  A++
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLS 452
            F +M  +G  P+  +   LIDG CK G   KA   F  M       ++  +  L   LS
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628

Query: 453 QGG---------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + G                 V D  +  +++   C  G +  A+++   + + G  P+I+
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN+LING CK+G I  A +LF  +  KGL  +SVTY T+I G  +     +AF++F  M
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              G  P   VY +L+   C+      A SL+L  + +           I+ F + G++ 
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLI 808

Query: 618 NAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            A Q + +M     D  + P    YTI +   C  G +KEA  +F  + +   +    + 
Sbjct: 809 EAYQLVEDMV----DNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864

Query: 674 VKLIHGLCKRG 684
             L+HG  + G
Sbjct: 865 TSLLHGYNRIG 875



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 298/611 (48%), Gaps = 48/611 (7%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++ L E++  N++  + +   +++G    GD  +A E F +M  +  +P++ IY  ++  
Sbjct: 427 YELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKG 486

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++  F  A+ +   M      P++  ++ +I G  K+GK E     L EM  +G+ PN
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            +TY   I G C+      A R F++M DSG +P+ V    L++G+CK     +A A  R
Sbjct: 547 VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFR 606

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G +P + ++S LI GL +  +  EA   + ++ ++ + PDV  Y  +I  L + G
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +K A +L  DM ++GI P+   YNALI G C LG + +AR L   I ++    N+ T++
Sbjct: 667 DLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYS 726

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            +I G C++  + +A +LF+ M+  G  P   ++ ALIDG CKAG  EKA          
Sbjct: 727 TIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKA---------- 776

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
              +LFL + + G  +    +   +++ +   G + +AY+++  + ++   P+ +TY  L
Sbjct: 777 --LSLFLGMVEEG--IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTIL 832

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I   C VGNI  A +LF E+Q + + P+ +TY +L++G  R+ R  + F +F +M   G 
Sbjct: 833 IEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGI 892

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P    +  ++    +          W++           ++K +++ L +G   N  + 
Sbjct: 893 KPDDLAWSVMVDAHLKEGN-------WIK-----------ALKLVDDMLSEG--VNVCKN 932

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L              YTI +  LC+   + E L +   + +  + ++  +C  L+    +
Sbjct: 933 L--------------YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHR 978

Query: 683 RGYLDLAMDVF 693
            G  D A+ V 
Sbjct: 979 AGRTDEALRVL 989



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 201/771 (26%), Positives = 344/771 (44%), Gaps = 70/771 (9%)

Query: 16  TPIEPALEPLLPFLSKTTVTSVIMKTK--NPQVGFRFFIWAAKRKRLRSFASNSAVISML 73
           +P+   L P + FL       VI + +  +P+    FF W   R       S  +++S++
Sbjct: 64  SPLPNKLNPDVVFL-------VIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLI 116

Query: 74  LKPNG-FDLYWQTLDEL---RSGNVSVVSDV------------------FFVLISGYYKV 111
           L  +G F      L+ +   R+ +V ++  +                  F +LI  Y K 
Sbjct: 117 LCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKK 176

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G   +A+  F   K  +    +   N++     +     L   VY  M+    +P++ T+
Sbjct: 177 GFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGA-IVPDVYTY 235

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LIN   + GK E    +L +M ++G +PN  TY++VI+GLC+    DEA  L   M +
Sbjct: 236 TNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMAN 295

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  PD   Y  L++GFC+ +R  E  ++L      G  P   +Y+ LI+G  +      
Sbjct: 296 KGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGG 355

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+    +MF  KI+ +   Y  +I GL + G ++ A  L S+M   GI PD   YN LI+
Sbjct: 356 AFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE 415

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+  +  +++A  L +EI K +   N +    ++ G+C  G +  A +LF +M   G  P
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKP 475

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLF------LRLSQGGNRVHDKASL 464
           ++ ++  ++ GL K G  E+A  +L    + G +P +F      +   + G     K+ L
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535

Query: 465 QTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
             M+ +               YC AG +  A +  +++ +SG  P+ +    LI+G+CK 
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN   A   F+ +  +G+ PD  T+  LI+GL +  + ++A  +F ++   G  P    Y
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTY 655

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENA---IQGLLE 625
            SL++  C+      AF L     +     +  +  ++   L K GE+  A     G+ E
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPE 715

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCK 682
                N      Y+  + G C+   + EA  +F  +   K +  PP       LI G CK
Sbjct: 716 KGLARNS---VTYSTIIAGYCKSANLTEAFQLFHGM---KLVGVPPDSFVYCALIDGCCK 769

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            G  + A+ +FL  ++ G    P   N L+    F K  K + AY L+  M
Sbjct: 770 AGNTEKALSLFLGMVEEGIASTPAF-NALIDG--FFKLGKLIEAYQLVEDM 817



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 221/459 (48%), Gaps = 16/459 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +   I GY + G+ + A  SF +M +    P+  I   +++   +      A A +  M
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +    LP++ T S+LI+GLSK+GK + A+ +  E+  +G++P+ FTYT +IS LC+    
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A+ L   M   G +P+ V YNAL+NG CKL  + +A  L     + G      +YS +
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  ++    EA+  +  M    + PD  +Y  +I G  +AG  + A+ L   M E GI
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
              T  +NALI GF  LG L +A  L  ++      PN  T+TILI   C  G + +A++
Sbjct: 789 AS-TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           LF +M+K    P+V  + +L+ G  + G   +   LF +M   G  P             
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP------------- 894

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   MV+ +   G   KA K++  +   G       Y  LI+  CK  N++  LK+
Sbjct: 895 -DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKV 953

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
             E++ +G +    T GTL+    R  R ++A R+   M
Sbjct: 954 LDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 1/341 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++IS L K       ++  D++    ++     +  LI+G  K+G+  KA E F  + E
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPE 715

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                +   Y+ ++    +      A  +++ M  +   P+   +  LI+G  K+G TE 
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +   M + GI      +  +I G  ++ +  EAY+L   M D+  +P+ V Y  L+ 
Sbjct: 776 ALSLFLGMVEEGIASTP-AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C +  + EA  L    +K   +P + +Y+ L+ G  R  R  E ++ + +M    I+P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D + + VM+    + G    A+KL+ DM   G+      Y  LI   C    L +   + 
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVL 954

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            E+ K+ S  +  T   L+C   R G  D+A ++   M ++
Sbjct: 955 DEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRS 995


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 178/661 (26%), Positives = 322/661 (48%), Gaps = 27/661 (4%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK---LNCLP 166
           +VG+    L    +M E  C PD   YN +L     ++    AL + + M      +C P
Sbjct: 144 RVGEAMDVL--LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPP 201

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+V++S +ING    G+ +    +  EM  RGI P+  TYT VI GLC+    D A  +F
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M D+G  P+   YN L++G+  + +  E + +L      G  P   +Y  L++ L + 
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKN 321

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R  EA  ++  M  + I+P V  YG+M+ G +  G + +   LL+ M   GI P+ + +
Sbjct: 322 GRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N     +   G++D+A  +  ++ ++   P+  ++  LI  +C+ G VDDA+  FN+M  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P + +F++L+ GLC   + EK   LF++M  +G +P +                  
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF--------------FN 487

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++   C  G + +  +++  +   G  PD+I+YN+LI+G C  G I+ A KL + +   
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 547

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+PDS +Y TL++G  +  R + A+  F +M  NG TP    Y +++    + ++FS A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L+L  +   +  D  +   I   L K   V+ AI+    +  K     +  + I +  
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L + G+ ++A+++F+ +     +    +   ++  L + G L+    +F    KNG    
Sbjct: 668 LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENM 764
            ++ N L+R LL   D  +  AY  L ++    + ++A     T S+L   +++ E ++ 
Sbjct: 728 SQMLNALVRRLLHRGDISRAGAY--LSKLDERNFSVEA----STTSMLISIFSSDEYQHH 781

Query: 765 S 765
           +
Sbjct: 782 A 782



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 265/584 (45%), Gaps = 53/584 (9%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           L+    D++ S   +VVS  +  +I+G++  G  +K    F +M +    PDV  Y  V+
Sbjct: 188 LHMMADDQVWSCPPNVVS--YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVI 245

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   + QLF  A AV+ +M+     PNI T++ LI+G    GK +  ++ML+EM+  G  
Sbjct: 246 DGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPK 305

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           PN  TY  +++ LC+  R  EA   F  M   G  P    Y  +L+G+     + E   L
Sbjct: 306 PNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDL 365

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L     +G  P    ++       +    D+A   + KM ++ + PD V YG +I  L +
Sbjct: 366 LNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+V DA    + M   G+ PD   +++L+ G C +   ++   L  E+      PN   
Sbjct: 426 LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           F  ++C +C+ G V + Q+L + +E  G  P V  +N LIDG C AG +++A+ L   M 
Sbjct: 486 FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP----- 494
            +G  P              D  S  T++  YC AG I  AY    ++  +G  P     
Sbjct: 546 SVGLKP--------------DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTY 591

Query: 495 ------------------------------DIITYNSLINGFCKVGNINGALKLFKELQL 524
                                         DI TYN ++NG CK   ++ A+K+F+ L  
Sbjct: 592 NTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCS 651

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KGL+ + +T+  +I  L +  R+EDA  +F  +P NG   +   Y+ ++           
Sbjct: 652 KGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEE 711

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
             SL+    ++ +  + + + + +   L +G++  A   L ++D
Sbjct: 712 FDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 755



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/655 (25%), Positives = 275/655 (41%), Gaps = 89/655 (13%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L+ + +  +S    +F +  S Y K G  +KA++ F KM++    PD   Y A+++   +
Sbjct: 366  LNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCK 425

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  A   + +M+     P+IV FS L+ GL    K E   ++  EM   GI PN   
Sbjct: 426  LGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVF 485

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            +  ++  LC+  R  E  RL   ++  G  PD ++YN L++G C    +DEA  LL    
Sbjct: 486  FNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545

Query: 266  KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
              G  P   SY+ L+ G  +A R D AY+ +RKM    I P VV Y  ++ GL +  +  
Sbjct: 546  SVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFS 605

Query: 326  DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +A +L  +M   G   D Y YN ++ G C    +D+A  +   +  +    N  TF I+I
Sbjct: 606  EAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMI 665

Query: 386  CGMCRNGMVDDA-----------------------------------QKLFNKMEKAGCF 410
              + + G  +DA                                     LF+ MEK G  
Sbjct: 666  GALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTA 725

Query: 411  PSVGMFNALIDGLCKAGELEKANLLFYKMEI------GKNPTLFLRLSQGGNRVHDKASL 464
            P+  M NAL+  L   G++ +A     K++           ++ + +       H   SL
Sbjct: 726  PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785

Query: 465  QT---MVEQYCTAGLIHKA------YKILMQLAESGNLPDIITYNSLI------------ 503
                 ++ +  ++ LI KA      Y +  ++   G  PD++TYN+++            
Sbjct: 786  PKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 845

Query: 504  -----------------------NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
                                   NG CK   ++ A K+F+ L  KGL+ + +T+  +I  
Sbjct: 846  KELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGA 905

Query: 541  LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
            L +  R+EDA  +F  +P NG  P    Y+ +               L+L   +  +  D
Sbjct: 906  LLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLD 965

Query: 601  DESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQL-APYTIWLIGLCQDGQVKE 653
               + + +   LQ+G++  A   L ++D K  +F L A  T  LI L   G+ + 
Sbjct: 966  SRLLNALVRRLLQRGDISRAGAYLSKLDEK--NFSLEASTTSELISLFSRGEYQH 1018



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 173/746 (23%), Positives = 306/746 (41%), Gaps = 44/746 (5%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S +TV +           +  F+    R       + + VI  L K   FD       +
Sbjct: 204 VSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQ 263

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V    D +  LI GY  +G  ++ +    +M     +P+   Y ++LN   +   
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A   +  M+     P++ T+ ++++G +  G       +L+ M   GI PN   + I
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
             S   +    D+A  +F KM+  G SPD V+Y AL++  CKL RVD+A         +G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  +S L+ GL    ++++    + +M    I P++V +  ++  L + G+V +  
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L+  +   G+ PD   YN LI G C  G +D+A  L   +      P++ ++  L+ G 
Sbjct: 504 RLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+ G +D A   F KM   G  P V  +N ++ GL +     +A              L+
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK------------ELY 611

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           L +   G +  D  +   ++   C +  + +A K+   L   G   +IIT+N +I    K
Sbjct: 612 LNMINSGTK-WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLK 670

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A+ LF  +   GL  + VTY  ++  L      E+   +F  M +NG  P+  +
Sbjct: 671 GGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 730

Query: 569 YKSLMTWSCRR---------------RKFSLAFSLWLQYLRDISGRD-DESMKSIEE--- 609
             +L+     R               R FS+  S     +   S  +     KS+ +   
Sbjct: 731 LNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR 790

Query: 610 ---------FLQKG-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                     ++K   +++A     EM  K     +  Y   L GL Q G+  EA  ++ 
Sbjct: 791 ILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYL 850

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            ++  +  +   +   +++GLCK   +D A  +F      G  L     N ++ +LL  K
Sbjct: 851 SMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL--K 908

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLY 745
             +K  A  L   + + G   D   Y
Sbjct: 909 GGRKEDAMDLFAAIPANGLVPDVVTY 934



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 264/586 (45%), Gaps = 34/586 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSG-------KTEVAIKMLDEMTQR---GILP 201
           AL ++ E++      ++V F+ L+  +S+S        ++E  + + + M +     + P
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-AL 260
           N+ TY+I+I   C++   +  +  F  +  +G   D +  N LLNG C  +RV EA+  L
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI---EPDVVLYGVMIRG 317
           L+   + G +P   SY+ L+ GL   KR +EA      M ++++    P+VV Y  +I G
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
               G+V     L  +M +RGI PD   Y  +I G C   L D+A ++  ++      PN
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+  LI G    G   +  ++  +M   G  P+   + +L++ LCK G   +A   F 
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLP 494
            M IGK                 K S+ T   M+  Y T G + + + +L  +  +G  P
Sbjct: 333 SM-IGKGI---------------KPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISP 376

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +   +N   + + K G I+ A+ +F +++ +GL PD+V+YG LI+ L ++ R +DA   F
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE-EFLQK 613
            QM   G TP   V+ SL+   C   K+     L+ + L      +     +I     ++
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKE 496

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G V    + +  ++       +  Y   + G C  G + EA  +   +V         S 
Sbjct: 497 GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSY 556

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
             L+HG CK G +D A   F   L NG        N +L  L  +K
Sbjct: 557 NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/485 (22%), Positives = 200/485 (41%), Gaps = 58/485 (11%)

Query: 68   AVISMLLKPNGF---------------DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
             ++S+ LKP+ F               D  +    ++ S  ++     +  ++ G ++  
Sbjct: 543  GMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTK 602

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
               +A E +  M     + D+Y YN +LN   +      A+ ++  +       NI+TF+
Sbjct: 603  RFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFN 662

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            ++I  L K G+ E A+ +   +   G++ N  TY +V+  L +    +E   LF  M+ +
Sbjct: 663  IMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKN 722

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF-------- 284
            G +P+    NAL+        +  A A L   ++  F     + S LI  +F        
Sbjct: 723  GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLIS-IFSSDEYQHH 781

Query: 285  ---------------------RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
                                 +A+R D+AY+ +R+M  + + PDVV Y  ++ GL + G+
Sbjct: 782  AKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 841

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
              +A +L   M       + Y YN ++ G C    +D+A  +   +  +    N  TF I
Sbjct: 842  FSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNI 901

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
            +I  + + G  +DA  LF  +   G  P V  +  + + L + G LE+ + LF  ME   
Sbjct: 902  MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSG 961

Query: 444  NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             P              D   L  +V +    G I +A   L +L E     +  T + LI
Sbjct: 962  TPL-------------DSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008

Query: 504  NGFCK 508
            + F +
Sbjct: 1009 SLFSR 1013



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 106/218 (48%), Gaps = 8/218 (3%)

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK----TEVAIKMLDEMTQRGILPNKFTYT 207
            A +++ EM+     P++VT++ +++GL ++G+     E+ + M++  TQ  I    +TY 
Sbjct: 810  AYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNI----YTYN 865

Query: 208  IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            I+++GLC+ N  DEA+++F  +   G   + + +N ++    K  R ++A+ L  +   +
Sbjct: 866  IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            G VP + +Y  + + L      +E    +  M +     D  L   ++R L + G +  A
Sbjct: 926  GLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
               LS + E+    +    + LI  F        A+SL
Sbjct: 986  GAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSL 1023


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 188/690 (27%), Positives = 317/690 (45%), Gaps = 72/690 (10%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG----FDLYWQTLDELRS 91
           + + +  +P+   +    A  R+    FA + AV   +++  G    FDL    + E+R 
Sbjct: 61  TALREQADPEAALQMLNSALARE---DFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESF-GKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
                 + V    +  Y ++   + A++    ++  F  Q D  +YN +LN+        
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L  +VY EM      P++VT + LI  L ++ +   A+ ML+EM+   + P++ T+T ++
Sbjct: 178 LLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    + A R+  KM ++GCSP  V  N L+NG+CK+ RV++AL  ++    DGF 
Sbjct: 238 QGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE 297

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+  +  L +      A      M +E  +PDV  Y  +I  LS+ G++ +A  +
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           ++ M +RG +PDT  +N LI   C    L++A  L  E+  +   P+ +TF ILI  +C+
Sbjct: 358 VNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 417

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP----- 445
            G      +LF +M+ +GC P    +N LID LC  G+L  A  L  +ME    P     
Sbjct: 418 VGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVT 477

Query: 446 --TLF------LRLSQGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQL 487
             T+       +R+ +    V D+           +  T+++  C A  I  A +++ Q+
Sbjct: 478 YNTIIDALCKQMRIEE-AEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G  P  ITYNS++  +CK G++  A  + + +   G   D VTYGTLINGL +  R 
Sbjct: 537 VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT 596

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           + A ++   M   G  P+P  Y  ++    RR     A SL+                  
Sbjct: 597 QVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF------------------ 638

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLVECKA 666
            E  + GE  +A+                 Y I   GLC+  G +KEA +    +V  K 
Sbjct: 639 REMTEVGEPPDAL----------------TYKIVFRGLCRGGGPIKEAFDFLVEMVN-KG 681

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            +   S  +++      G L+L MD +L +
Sbjct: 682 FMPEFSSFRML----AEGLLNLGMDDYLIS 707



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 268/600 (44%), Gaps = 33/600 (5%)

Query: 174 LINGLSKSGKTEVAIKMLDE-MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           L+  L +    E A++ML+  + +    P++  Y  +I  L      D    L  +M+  
Sbjct: 59  LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           G         + +  + +LRR D+A+ L+R+     G       Y+ L++ L    R   
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
             + Y +M +  I+PDVV    +I+ L  A +V+ A+ +L +M    + PD   +  L++
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           GF + G ++ A  ++ ++ +    P   T  +LI G C+ G V+DA     K    G  P
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR------LSQGG--------- 455
               +N  +  LC+ G +  A  ++   ++ G +P +F        LS+ G         
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358

Query: 456 NRVHDKASL------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           N++ D+  L       T++   C+   + +A  +  +L   G  PD+ T+N LIN  CKV
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G+ +  ++LF+E++  G  PD VTY  LI+ L  + +  +A  +  +M  NGC  S   Y
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            +++   C++ +   A  ++ Q       R   +  ++ + L K +  +    L+E   K
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538

Query: 630 LNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                L P    Y   L   C+ G +K+A +I   +      +   +   LI+GLCK G 
Sbjct: 539 EG---LQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             +A+ +       G    P+  N +++S LF ++N +  A  L   M  VG   DA  Y
Sbjct: 596 TQVALKLLRGMRIKGIRPTPKAYNPVIQS-LFRRNNLR-DALSLFREMTEVGEPPDALTY 653


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 177/628 (28%), Positives = 300/628 (47%), Gaps = 65/628 (10%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+ SF +M      P    +N +L    + +     L++ ++M      PNI T  +L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+T +I G+C   +  EA  LF KM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGF 162

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V Y  L+NG CK+     A+ LL S  +    P + +Y+ +ID L + ++  EA+ 
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + I PD+  Y  +I  L    + K    LL++M +  I+PD   +N ++   C
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +  ++ +R   PN  T+T L+ G C    +D+A K+F+ M   GC P+V 
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI+G CK   ++KA                         +H       +++  C  
Sbjct: 343 SYNTLINGYCKIQRIDKA-------------------------IH----YTXLMDXXCCY 373

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A K+   +   G +P++I+YN+LING+CK+  I+ A+ LF E+  + L PD+VTY
Sbjct: 374 LNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 433

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TLI+GL  V+R +DA  +F +M      P+   Y+ L+ + C+ R  + A +L    L+
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL----LK 489

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            I G +                       L+ D ++N+       I + G+C+ G+++ A
Sbjct: 490 AIEGSN-----------------------LDPDIQVNN-------IAIDGMCRAGELEAA 519

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
            ++FS L          +   +I+GLC+RG LD A  +F    +NG  L   + N + R 
Sbjct: 520 RDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 579

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            L  ++N+   A  LL  M + G+  DA
Sbjct: 580 FL--RNNETSRAIQLLQEMVARGFSADA 605



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 258/565 (45%), Gaps = 41/565 (7%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K+      L    +M  F   P++Y  + ++N          A +V  +++
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+  TF+ LI G+   GK   A+ + D+M   G  P+  TY  +I+GLC++    
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A RL   M    C P+  AYN +++  CK R+V EA  L       G  P + +Y+ LI
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L     +        +M + KI PDVV +  ++  L + GKV +A  ++  M +RG+ 
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD----- 395
           P+   Y AL+ G C L  +D+A  +   +  +  +PN  ++  LI G C+   +D     
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363

Query: 396 --------------DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-- 439
                         +A K+F+ M   GC P+V  +N LI+G CK   ++KA  LF +M  
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423

Query: 440 -EIGKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIHK 479
            E+  +   +  L  G     R+ D  +L                + +++  C    + +
Sbjct: 424 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 483

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  +L  +  S   PDI   N  I+G C+ G +  A  LF  L  KGL+PD  TY  +IN
Sbjct: 484 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 543

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL R    ++A ++F +M +NGCT +  +Y ++     R  + S A  L  + +      
Sbjct: 544 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 603

Query: 600 DDESMKSIEEFLQKGEVENAIQGLL 624
           D  +M    + L    ++ +++ +L
Sbjct: 604 DASTMTLFVKMLSDDGLDQSLKQIL 628



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 237/499 (47%), Gaps = 70/499 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G  KVG+   A+   G M + +CQP+V+ YN +++   + +    A  ++ EM
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 160 VK-----------------------------LN------CLPNIVTFSLLINGLSKSGKT 184
           V                              LN       +P++V+F+ +++ L K GK 
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A  ++D+M QRG+ PN  TYT ++ G C ++  DEA ++F  M   GC P+ ++YN L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK++R+D+A+                 Y+ L+D        DEA   +  M  +  
Sbjct: 348 INGYCKIQRIDKAI----------------HYTXLMDXXCCYLNMDEAVKVFDTMVCKGC 391

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+V+ Y  +I G  +  ++  AM L  +M  + ++PDT  Y+ LI G C +  L  A +
Sbjct: 392 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 451

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+     +PN  T+ IL+  +C+N  + +A  L   +E +   P + + N  IDG+C
Sbjct: 452 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 511

Query: 425 KAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           +AGELE A  LF  +   G  P              D  +   M+   C  GL+ +A K+
Sbjct: 512 RAGELEAARDLFSNLSSKGLQP--------------DVWTYSIMINGLCRRGLLDEASKL 557

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ E+G   +   YN++  GF +    + A++L +E+  +G   D+ T    +  L  
Sbjct: 558 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS- 616

Query: 544 VDREEDAFRIFGQMPQNGC 562
              ++   +   Q+ +NGC
Sbjct: 617 ---DDGLDQSLKQILRNGC 632



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 202/426 (47%), Gaps = 19/426 (4%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+ + + K  N     R      ++    +  + + +I  L K       +    E+ + 
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            +S     +  LI     + + +       +M +    PDV  +N V++   ++     A
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             V  +M++    PN+VT++ L++G     + + A+K+ D M  +G +PN  +Y  +I+G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350

Query: 213 LCQINR-------------------ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
            C+I R                    DEA ++F  M   GC P+ ++YN L+NG+CK++R
Sbjct: 351 YCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 410

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +D+A+ L     +   +P   +YS LI GL   +R  +A A + +M      P++V Y +
Sbjct: 411 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 470

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++  L +   + +AM LL  +    + PD    N  I G C  G L+ AR L   +  + 
Sbjct: 471 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 530

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  T++I+I G+CR G++D+A KLF +M++ GC  +  ++N +  G  +  E  +A 
Sbjct: 531 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 590

Query: 434 LLFYKM 439
            L  +M
Sbjct: 591 QLLQEM 596



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 23/371 (6%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K +    S + V+  L K          +D++    V      +  L+ G+  + + ++A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF--------LL-----------ALAVYYE 158
           ++ F  M    C P+V  YN ++N   + Q          L+           A+ V+  
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDT 385

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV   C+PN+++++ LING  K  + + A+ +  EM ++ ++P+  TY+ +I GLC + R
Sbjct: 386 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVER 445

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A  LF +M      P+ V Y  LL+  CK R + EA+ALL++ E     P +   + 
Sbjct: 446 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 505

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
            IDG+ RA   + A   +  +  + ++PDV  Y +MI GL   G + +A KL  +M E G
Sbjct: 506 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 565

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              +   YN + +GF       +A  L  E+  R    +  T T+ +  +  +G+    +
Sbjct: 566 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 625

Query: 399 KLFNKMEKAGC 409
           ++     + GC
Sbjct: 626 QIL----RNGC 632


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 152/459 (33%), Positives = 242/459 (52%), Gaps = 15/459 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+    N ++N   + Q   L  +V  + +KL   P IVTF+ LINGL K GK   A+++
Sbjct: 8   PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D+M  RG  P+ +TYT +I+GLC+I     A  LF KM+++GC  + V Y+ L++  CK
Sbjct: 68  FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            RRV+EAL +    +     P + +Y+ LI GL    R+ EA A   +M    I P+VV 
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + V++    + GKV  A  +L  M E G+ PD   YN+L+ G+     + +AR L   + 
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +   P+  +++ILI G C+   +D+A++LFN+M   G  P+   +N LI GLC+ G L 
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307

Query: 431 KANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A  LF  M    N P L+              +   +++ +C  G + KA+++   +  
Sbjct: 308 EAQDLFKNMHTNGNLPNLY--------------TYAILLDGFCKQGYLGKAFRLFRAMQS 353

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +   P+++ YN L+N  CK GN+  A +LF EL + GL+P+   Y T+INGL +    ++
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           A   F  M  +GC P    Y  ++    + +  S A  L
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHL 452



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 221/435 (50%), Gaps = 15/435 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G  KVG   +A+E F  M    CQPD Y Y  ++N   +     LA  ++ +M
Sbjct: 47  TFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM 106

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C  N+VT+S LI+ L K  +   A+ +   M  + I P  FTYT +I GLC  +R 
Sbjct: 107 EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRW 166

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L  +M      P+ V +N L++ FCK  +V  A  +L++  + G  P + +Y+ L
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G        EA   +  M  +  +PDV  Y ++I G  +A ++ +A +L ++M  +G 
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI G C LG L +A+ L   +    +LPN +T+ IL+ G C+ G +  A +
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           LF  M+     P++ M+N L++ +CK+G L+ A  LF ++  IG  P + +         
Sbjct: 347 LFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQI--------- 397

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                  T++   C  GL+ +A +    + + G  PD  +YN +I GF +  + + A+ L
Sbjct: 398 -----YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHL 452

Query: 519 FKELQLKGLRPDSVT 533
             E++ +G   D+ T
Sbjct: 453 IGEMRDRGFITDAGT 467



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 233/515 (45%), Gaps = 51/515 (9%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+ +G SP+    N L+N FC+L+RVD   ++L    K G  P + +++ LI+GL +  +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           + +A   +  M     +PD   Y  +I GL + G+   A  L   M E G   +   Y+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI   C    +++A  +   +  +D  P   T+T LI G+C      +A  L N+M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P+V  FN L+D  CK G++  A  +   M E+G  P              D  +  ++
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP--------------DVVTYNSL 226

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  Y     + +A K+   +   G  PD+ +Y+ LING+CK   I+ A +LF E+  +G 
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGS 286

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P++V+Y TLI+GL ++ R  +A  +F  M  NG  P+   Y  L+   C++     AF 
Sbjct: 287 TPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFR 346

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L+             +M+S   +L+                      L  Y I +  +C+
Sbjct: 347 LF------------RAMQST--YLKP--------------------NLVMYNILVNAMCK 372

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G +K+A  +FS L              +I+GLCK G LD A++ F     +G       
Sbjct: 373 SGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFS 432

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            N ++R  L  KD  +  A HL+  M+  G+  DA
Sbjct: 433 YNVIIRGFLQHKDESR--AVHLIGEMRDRGFITDA 465



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 212/469 (45%), Gaps = 49/469 (10%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M   G+ PN  T  I+I+  CQ+ R D  + +  K    G  P  V +  L+NG  K+ +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             +A+ L       G  P   +Y+ +I+GL +      A   ++KM E   + +VV Y  
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I  L +  +V +A+ + S M+ + I P  + Y +LI+G C+     +A +L  E+   +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 374 SLPNTHTFTILICGMCRNGM-----------------------------------VDDAQ 398
            +PN  TF +L+   C+ G                                    V +A+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           KLF+ M   GC P V  ++ LI+G CKA  +++A  LF +M           + QG    
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM-----------IHQGS--T 287

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  S  T++   C  G + +A  +   +  +GNLP++ TY  L++GFCK G +  A +L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+ +Q   L+P+ V Y  L+N + +    +DA  +F ++   G  P+  +Y +++   C+
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK 407

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
                 A   +     D    D+ S    I  FLQ  +   A+  + EM
Sbjct: 408 EGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 150/288 (52%), Gaps = 2/288 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+ S N+      F VL+  + K G    A      M E   +PDV  YN+++     
Sbjct: 173 LNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSM 232

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               + A  ++  M+   C P++ ++S+LING  K+ + + A ++ +EM  +G  PN  +
Sbjct: 233 WTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS 292

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I GLCQ+ R  EA  LF  M  +G  P+   Y  LL+GFCK   + +A  L R+ +
Sbjct: 293 YNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ 352

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P L  Y+ L++ + ++    +A   + ++F   ++P+V +Y  +I GL + G + 
Sbjct: 353 STYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +A++   +M + G  PD + YN +I+GF  L   D++R++ +    RD
Sbjct: 413 EALEAFRNMEDDGCPPDEFSYNVIIRGF--LQHKDESRAVHLIGEMRD 458



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 2/212 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+   K    D   Q  +E+     +  +  +  LI G  ++G   +A + F  M
Sbjct: 257 SYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
                 P++Y Y A+L   F KQ +L  A  ++  M      PN+V +++L+N + KSG 
Sbjct: 317 HTNGNLPNLYTY-AILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A ++  E+   G+ PN   YT +I+GLC+    DEA   F  M+D GC PD  +YN 
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           ++ GF + +    A+ L+      GF+   G+
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 281/577 (48%), Gaps = 61/577 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P   ++N V+    R      AL VY +M   +  P+ +T++ L++GLSK+ +   A+++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L EM     +P+  T T+V+  LC  +R D+A  L  +M   G + + + Y+AL++G CK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R+DEA+AL+ +  + G  P + +Y+ +I G  RA+R DEA+ +  +M  E   PD++ 
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G  ++  V   ++LL ++  RG  PD   Y+ +I G C  G L  A    V+I+
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA----VDIF 237

Query: 371 KRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           +  S  P   T+  LI G CR G +D+A +L  KM    C P V  +  L+   CK G L
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 430 EKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           + A  LF +M   K +P              D  +  ++V+  C  G +  A ++L ++ 
Sbjct: 298 DDAYELFQQMVANKLSP--------------DVVTFTSLVDGLCGEGRMEDALELLEEIT 343

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  P I TYN +++G+CK   +  A +L  + + +G  P++VTY  L+ G  R  R +
Sbjct: 344 RRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 403

Query: 549 DAFRIFGQMPQNG--CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            A +   Q+   G  C  S A+Y  ++   CR                   GR D++++ 
Sbjct: 404 QALQYLDQLNSEGGPCPTSVAMYAIILDALCR------------------DGRTDDAVQF 445

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
            EE +Q+G V  A                A +   +  LC+  Q ++A  +   +++   
Sbjct: 446 YEEMIQRGYVPAA----------------ATFATVVFALCKAHQPQQAHELLEEMIKYGH 489

Query: 667 IVTPPSCVKLIHGLCKRGYL----DLAMDVFLYTLKN 699
              P +C  ++   C+ G +    +LA ++ LYT K+
Sbjct: 490 TPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKS 526



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 249/499 (49%), Gaps = 18/499 (3%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           FL+ T +   + K +  +   +        + +    + + V+  L   +  D   + ++
Sbjct: 39  FLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 98

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    ++  +  +  L+ G  K    ++A+     M E  C P V  YN+++    R +
Sbjct: 99  EMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRAR 158

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A     +MV   C P+I+T++ LI G  KS      +++L E+T+RG  P+  TY+
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYS 218

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI GLC+  R  +A  +F +M    C+P  + YN+L+ G+C+   +DEA+ LL     D
Sbjct: 219 TVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P + +Y+ L+    +  R D+AY  +++M   K+ PDVV +  ++ GL   G+++DA
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           ++LL ++  RG  P  Y YN ++ G+C    + +A  L  +   R  +PNT T+ IL+ G
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395

Query: 388 MCRNGMVDDAQKLFNKMEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            CR G  D A +  +++   G  C  SV M+  ++D LC+ G  + A + FY+  I +  
Sbjct: 396 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA-VQFYEEMIQR-- 452

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                       V   A+  T+V   C A    +A+++L ++ + G+ P   T +++++ 
Sbjct: 453 ----------GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502

Query: 506 FCKVGNINGALKLFKELQL 524
           +C+ G I  A +L  EL+L
Sbjct: 503 YCRAGMIQKADELASELRL 521



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 247/517 (47%), Gaps = 20/517 (3%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P    + +VI GLC+  R   A  ++ +M D+   PDF+ Y  L++G  K RR+ +A+ +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L+       VP   + + ++  L    R D+A     +M    +  + + Y  ++ GL +
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++ +A+ L+  M ERG  P    YN++I GFC    +D+A     ++      P+  T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +T LI G C++  V    +L  ++ + G  P +  ++ +IDGLCKAG L  A  +F +M 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
               PT                +  +++  YC AG + +A ++L ++ +    PD++TY 
Sbjct: 242 CA--PTAI--------------TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT 285

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +L++ FCK+G ++ A +LF+++    L PD VT+ +L++GL    R EDA  +  ++ + 
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENA 619
           GC P+   Y  ++   C+  +   A  L   +  R            +    + G  + A
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405

Query: 620 IQGLLEMDFKLND--FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           +Q L +++ +       +A Y I L  LC+DG+  +A+  +  +++   +    +   ++
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             LCK      A ++    +K G    P  C+ ++ +
Sbjct: 466 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 189/756 (25%), Positives = 334/756 (44%), Gaps = 123/756 (16%)

Query: 14  TVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWA------------------- 54
           +V  I   L P+   +  + V +V+   K       FF WA                   
Sbjct: 69  SVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNL 128

Query: 55  --AKRKRLRSFASNSAVISMLLKPN--GFDLYWQTLDELRSGNVSVVS------------ 98
             A++   + +A +  ++   + PN   F++  ++    R  + +V              
Sbjct: 129 LVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPD 188

Query: 99  -DVFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVY 156
              F +L+    K G  EKA E F +M       PD  ++ A++    + +    A  V+
Sbjct: 189 LHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVF 248

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M K    P+ + ++ +I+GL+K+G  + A+K+LD M  +  +P + TY I+++ LC+ 
Sbjct: 249 GQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKA 308

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              + A  LF  M  SG  P+ V Y +L++GF K  R+ EA +L     + G+ P + ++
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +IDGL ++  +++A   + +M     +P+VV Y  +I+GLS+ G+V +A +++  M  
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL------------ 384
            G  PD+  Y  L+ GFC LG LD+A  L  E+ K  S PN   ++ L            
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488

Query: 385 ------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
                                   I G+C+ G +D+A ++F +M   GC P    +N LI
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 421 DGLCKAGE--LEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +GLC++ E  +E+A  L + +E +G  P              D  +   +    C  G +
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLP--------------DAVTYTPLCIGLCKIGEV 594

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A K+L + +  G   D++ Y +L  G C  G ++ A+ LF+E+  +G  PD+  Y  +
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           INGL +  + EDA + F +M   G  P+ A Y +L+   C                   +
Sbjct: 655 INGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH------------------A 696

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G  DE+    E  L +GE+  ++                 Y   + G C+  +V  AL +
Sbjct: 697 GNVDEAFHRFEGMLARGELVGSVM---------------IYDALIHGFCKALKVDAALKL 741

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           F  ++    + T  +   L  GL + G  + A ++ 
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 183/671 (27%), Positives = 301/671 (44%), Gaps = 65/671 (9%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-------------------------- 163
           Q DV+ YN ++N+   ++ +    A++ EM+K                            
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175

Query: 164 ---------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGL 213
                    C P++ TF +L++ L K+G  E A ++  EM   G + P++  +T ++  L
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            +  R  EA  +F +M+  G  PD +AYN +++G  K     EAL +L +      VP  
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y  L++ L +A   + A   +R M      P+ V+Y  +I G +++G++K+A  L  +
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M E G  PD   +  +I G C  G  +QA     E+ +    PN  T+T +I G+ + G 
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL--- 449
           V +A ++   M   GCFP    +  L+DG CK G L++A  L  +++    +P L L   
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475

Query: 450 ---RLSQGG---NRVHD-----KASLQ--------TMVEQYCTAGLIHKAYKILMQLAES 490
               L  GG   N + D     KA+ +        +++   C  G + +A +I  ++   
Sbjct: 476 LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE 535

Query: 491 GNLPDIITYNSLINGFCKV--GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           G  PD  TYN LING C+     +  A  L  +L++ G  PD+VTY  L  GL ++   +
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            A ++  +    G       Y +L T  C + +   A SL+ + +R     D  +   I 
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCII 655

Query: 609 EFLQKG-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
             L KG ++E+A +   EM  K     +A YT  +  LC  G V EA + F  ++    +
Sbjct: 656 NGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGEL 715

Query: 668 VTPPSCV-KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           V        LIHG CK   +D A+ +F   +  G +        L   L+ S   +K  A
Sbjct: 716 VGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK--A 773

Query: 727 YHLLCRMKSVG 737
             LL  M + G
Sbjct: 774 QELLQEMAAGG 784



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 238/483 (49%), Gaps = 23/483 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S ++  LI G+ K G  ++A   F +M E   +PDV  +  +++   +   F  A   + 
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM++  C PN+VT++ +I GLSK G+   A +++  M   G  P+  TY  ++ G C++ 
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR---LG 274
           R DEA +L  ++     SP+   Y++L+ G C    V+  L  L  FE+          G
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDL--FEQSKAAAENLDPG 507

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--SEAGKVKDAMKLLS 332
               +I GL +  R DEA   +++M  E  +PD   Y ++I GL  S   +V+ A  LL 
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           D+   G +PD   Y  L  G C +G +D+A  +  E   R    +   +T L  G+C  G
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            VD A  LF +M + G  P    +  +I+GL K  +LE A   F +M   G+ PT+    
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV---- 683

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVG 510
                     A+   +V+  C AG + +A+     +   G L   ++ Y++LI+GFCK  
Sbjct: 684 ----------ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ ALKLF+++  +G  P +VT  +L +GL R  + E A  +  +M   G  P  A + 
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 571 SLM 573
           +++
Sbjct: 794 AIL 796



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 239/540 (44%), Gaps = 61/540 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K        + LD + +         + +L++   K G  E+A E F  M  
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+  IY ++++   +      A +++ EMV+    P+++T +++I+GL KSG  E 
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K  +EM + G  PN  TYT +I GL +I R   A+R+   M   GC PD V Y  LL+
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF---------------------- 284
           GFCKL R+DEA  LL   +K    P L  YS L+ GL                       
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503

Query: 285 --------------RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--SEAGKVKDAM 328
                         +  R DEA   +++M  E  +PD   Y ++I GL  S   +V+ A 
Sbjct: 504 LDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            LL D+   G +PD   Y  L  G C +G +D+A  +  E   R    +   +T L  G+
Sbjct: 564 ALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT- 446
           C  G VD A  LF +M + G  P    +  +I+GL K  +LE A   F +M   G+ PT 
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTV 683

Query: 447 -----LFLRLSQGGNR----------------VHDKASLQTMVEQYCTAGLIHKAYKILM 485
                L   L   GN                 V        ++  +C A  +  A K+  
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   GN+P  +T  SL +G  + G    A +L +E+   G  P + T+  +++GL++ D
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 237/499 (47%), Gaps = 17/499 (3%)

Query: 251 LRRVDEALALLR-SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           L+    A++  R + E+ GF   + +Y+CL++ L   K Y + YA + +M +  I P+  
Sbjct: 96  LKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTF 155

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            + ++IR  +   +  DA+     M+ +   PD + +  L+   C  G+ ++A  +  E+
Sbjct: 156 SFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEM 215

Query: 370 WKRDSLPNTHTF-TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
                +P      T ++  + +   V +A+++F +MEK G  P    +N +IDGL KAG 
Sbjct: 216 MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGH 275

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            ++A  +   M           L++    V  + +   +V   C AG + +A ++   +A
Sbjct: 276 AQEALKVLDNM-----------LAKAC--VPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            SG  P+ + Y SLI+GF K G +  A  LF E+   G RPD +T+  +I+GL +    E
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES-MKSI 607
            A + F +M + GC P+   Y +++    +  + + AF +    +      D  + +  +
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL-NIFSVLVECKA 666
           + F + G ++ A Q L E+D   +   L  Y+  + GLC  G V+  L ++F        
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE 502

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            + P  C  +I GLCK G LD A  +F   +  G        N L+  L  S++N+   A
Sbjct: 503 NLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERA 562

Query: 727 YHLLCRMKSVGYDLDACLY 745
           + LL  ++ VGY  DA  Y
Sbjct: 563 FALLHDLEMVGYLPDAVTY 581



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 173/357 (48%), Gaps = 4/357 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES-FGKMKEFDCQPDVYIYN 137
            D   Q LDEL   + S    ++  L+ G    G  E  L+  F + K      D  +  
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL--SKSGKTEVAIKMLDEMT 195
           +++    +      A  ++  MV   C P+  T+++LINGL  S+  + E A  +L ++ 
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G LP+  TYT +  GLC+I   D A ++  +    G + D VAY AL  G C   +VD
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A++L +   + G  P   +Y C+I+GL + K+ ++A  ++ +M  +  +P V  Y  ++
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690

Query: 316 RGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + L  AG V +A      M  RG +V     Y+ALI GFC    +D A  L  ++  R +
Sbjct: 691 QALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +P   T   L  G+ R+G  + AQ+L  +M   G  P    F A++DGL K+ E  K
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 1/231 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L  G  K+G+ ++A++   +        DV  Y A+      +     A++++ EMV+  
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+   +  +INGL K  K E A K  DEM  +G  P   TYT ++  LC     DEA+
Sbjct: 644 GAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703

Query: 224 RLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             F  M   G      + Y+AL++GFCK  +VD AL L       G VP   + + L DG
Sbjct: 704 HRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
           L R+ + ++A    ++M      P    +  ++ GL ++ +    +KL+ +
Sbjct: 764 LVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/475 (32%), Positives = 246/475 (51%), Gaps = 16/475 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L+S   K+G    A+ S  K  E     PD+Y  + +++     Q   LA +V+ +M
Sbjct: 97  FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P+ VTF+ LINGL K GK   A++  D+    G  P  +TYT +I+GLC+I   
Sbjct: 157 IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF KM+++GC P+ V YN L++  CK + V+EAL +    +     P + +Y+ L
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL   +R+ EA A   +M    I P++  + V++  + + GKV +A  +   M E G+
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y++L+ G+     + +AR L   +  +   P+  ++ ILI G C+   +D+A++
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRV 458
           LFN+M   G  P    +N LI GLC+ G L +A  LF  M    N P LF          
Sbjct: 397 LFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLF---------- 446

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   +++ +C  G + KA+++   +  +   PDI  YN LI+  CK GN+  A KL
Sbjct: 447 ----TYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKL 502

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           F EL ++GL P+   Y T+IN L +    ++A   F  M  +GC P    Y  ++
Sbjct: 503 FSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 245/512 (47%), Gaps = 50/512 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA-IKMLDEMTQRGILPNKFTYTIVI 210
           ALA +  M+    LP I+ F+ L++ + K G+   A I +  +M   G+ P+ +T +I+I
Sbjct: 78  ALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILI 137

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
                + R D A+ +F KM   G  PD V +N L+NG CK+ +  +A+     FE  G  
Sbjct: 138 DCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ 197

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +Y+ +I+GL +      A   ++KM E   +P+VV Y ++I  L +   V +A+ +
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            S M+ + I PD + YN+LI+G C+     +A +L  E+   + +PN  TF +L+  +C+
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK 317

Query: 391 NGMVDDAQ-----------------------------------KLFNKMEKAGCFPSVGM 415
            G V +AQ                                   KLF+ M   GC P    
Sbjct: 318 EGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFS 377

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +N LI G CKA  +++A  LF +M           + QG     D  +  T++   C  G
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEM-----------IHQG--LTPDNVNYNTLIHGLCQLG 424

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +   +  +GNLPD+ TY+ L++GFCK G +  A +LF+ +Q   L+PD   Y 
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            LI+ + +    +DA ++F ++   G  P+  +Y +++   C+      A   +     D
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544

Query: 596 ISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
               D+ S    I  FLQ  +   A Q + EM
Sbjct: 545 GCPPDEFSYNVIIRGFLQYKDESRAAQLIGEM 576



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 197/378 (52%), Gaps = 8/378 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L K   F    +  D+  +         +  +I+G  K+G+   A   F KM+E
Sbjct: 169 NTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE 228

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             CQP+V  YN +++   + +L   AL ++  M      P+I T++ LI GL    + + 
Sbjct: 229 AGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKE 288

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L+EMT   I+PN FT+ +++  +C+  +  EA  +F  M + G  PD V Y++L+ 
Sbjct: 289 ASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMY 348

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+     + EA  L  +    G  P   SY+ LI G  +AKR DEA   + +M  + + P
Sbjct: 349 GYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTP 408

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA---- 362
           D V Y  +I GL + G++++A  L  +M   G +PD + Y+ L+ GFC  G L +A    
Sbjct: 409 DNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF 468

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           R +Q    K    P+   + ILI  MC+ G + DA+KLF+++   G  P+V ++  +I+ 
Sbjct: 469 RVMQSTYLK----PDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524

Query: 423 LCKAGELEKANLLFYKME 440
           LCK G L++A   F  ME
Sbjct: 525 LCKEGLLDEALEAFRNME 542



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 248/558 (44%), Gaps = 52/558 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY-RLFLKMKDSGCSPDFVAYNALL 245
           A+   + M  R  LP    +T ++S + ++ +   A   L  +M+ +G SPD    + L+
Sbjct: 78  ALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILI 137

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + F  L+RVD A ++     K G  P   +++ LI+GL +  ++ +A  ++        +
Sbjct: 138 DCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQ 197

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P V  Y  +I GL + G+   A  L   M E G  P+   YN LI   C   L+++A  +
Sbjct: 198 PTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDI 257

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +  +   P+  T+  LI G+C      +A  L N+M      P++  FN L+D +CK
Sbjct: 258 FSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICK 317

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G++ +A  +F  M E+G  P              D  +  +++  Y     I +A K+ 
Sbjct: 318 EGKVSEAQGVFKTMTEMGVEP--------------DVVTYSSLMYGYSLRMEIVEARKLF 363

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             +   G  PD  +YN LI G+CK   I+ A +LF E+  +GL PD+V Y TLI+GL ++
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R  +A  +F  M  NG  P    Y  L+   C+      AF L+              M
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF------------RVM 471

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           +S                 L+ D       +A Y I +  +C+ G +K+A  +FS L   
Sbjct: 472 QST---------------YLKPD-------IAMYNILIDAMCKFGNLKDARKLFSELFVQ 509

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
             +        +I+ LCK G LD A++ F     +G        N ++R  L  KD  + 
Sbjct: 510 GLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESR- 568

Query: 725 HAYHLLCRMKSVGYDLDA 742
            A  L+  M+  G+  +A
Sbjct: 569 -AAQLIGEMRDRGFVAEA 585



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 147/288 (51%), Gaps = 2/288 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+ S N+      F VL+    K G   +A   F  M E   +PDV  Y++++     
Sbjct: 293 LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSL 352

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +   + A  ++  M+   C P+  ++++LI G  K+ + + A ++ +EM  +G+ P+   
Sbjct: 353 RMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVN 412

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I GLCQ+ R  EA  LF  M  +G  PD   Y+ LL+GFCK   + +A  L R  +
Sbjct: 413 YNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P +  Y+ LID + +     +A   + ++F + + P+V +Y  +I  L + G + 
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +A++   +M   G  PD + YN +I+GF  L   D++R+ Q+    RD
Sbjct: 533 EALEAFRNMEGDGCPPDEFSYNVIIRGF--LQYKDESRAAQLIGEMRD 578



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 195/461 (42%), Gaps = 52/461 (11%)

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVPDTYC 345
           +  D+A A +  M   +  P ++ +  ++  + + G+   A+  LS   E  G+ PD Y 
Sbjct: 73  RNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYT 132

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
            + LI  F  L  +D A S+  ++ K    P+  TF  LI G+C+ G    A + F+  E
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASL 464
            +GC P+V  +  +I+GLCK GE   A  LF KME  G  P +               + 
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV--------------VTY 238

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++  C   L+++A  I   +      PDI TYNSLI G C       A  L  E+  
Sbjct: 239 NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
             + P+  T+  L++ + +  +  +A  +F  M + G  P    Y SLM           
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM----------Y 348

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
            +SL ++ +        E+ K  +  + KG   +A                  Y I + G
Sbjct: 349 GYSLRMEIV--------EARKLFDAMITKGCKPDAFS----------------YNILIKG 384

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
            C+  ++ EA  +F+ ++         +   LIHGLC+ G L  A D+F     NG +  
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL-- 442

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           P +  Y +    F K+     A+ L   M+S     D  +Y
Sbjct: 443 PDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 118/240 (49%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY    +  +A + F  M    C+PD + YN ++    + +    A  ++ EM+   
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ V ++ LI+GL + G+   A  +   M   G LP+ FTY++++ G C+     +A+
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           RLF  M+ +   PD   YN L++  CK   + +A  L       G +P +  Y+ +I+ L
Sbjct: 466 RLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNL 525

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +    DEA   +R M  +   PD   Y V+IRG  +      A +L+ +MR+RG V + 
Sbjct: 526 CKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEA 585



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 2/174 (1%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVK 161
            LI G  ++G   +A + F  M      PD++ Y+ +L+  F K+ +L  A  ++  M  
Sbjct: 415 TLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLD-GFCKEGYLGKAFRLFRVMQS 473

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P+I  +++LI+ + K G  + A K+  E+  +G+LPN   YT +I+ LC+    DE
Sbjct: 474 TYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           A   F  M+  GC PD  +YN ++ GF + +    A  L+      GFV   G+
Sbjct: 534 ALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 51/108 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +LI    K G+ + A + F ++      P+V IY  ++N   ++ L   AL  +  M
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM 541

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               C P+  +++++I G  +      A +++ EM  RG +    T T
Sbjct: 542 EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 181/627 (28%), Positives = 305/627 (48%), Gaps = 55/627 (8%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           ++  P +  +FF WA ++   +    S + ++ +L+K        +   +L     S   
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             F +LI G  K G   +ALE    + EF   PDVYI+N +++  F+      A+ ++  
Sbjct: 63  VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQI 216
           M      P IVT++ +I+GL KSG  E A ++L+EM ++G    P+  TY  +I+   + 
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           +R  EA     KMK +G +PD +  N L++G CK   V+EAL +L   +  G VP + +Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  L  A +  EA    + M      PD+V +  ++ G  +AG +  A+++L +M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             I+PD   Y  L+ G C +G +  A  L  EI ++  +P+   +T L+ G+C++G +++
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A KL  +M   GC   V M+++L+ G C+AG + KA  +  +M  I   P LF      G
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLG 419

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
             + D              G I KA  ++  L   G +PD++TYN+LI+G CK   +  A
Sbjct: 420 GLIKD--------------GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 465

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L  E+  +G  P+ VT G+++ GL RV R +DA+ +  +M +    P+  VY SL+  
Sbjct: 466 CDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 525

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+  +                  DD  M           V +A++G       L+DF  
Sbjct: 526 LCKSDRM-----------------DDACM-----------VLDAMRG---QGVALDDF-- 552

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLV 662
             Y   ++ +   G+V EA+ ++  +V
Sbjct: 553 -AYRKLIVSMSHGGRVAEAMAMYDEMV 578



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 253/508 (49%), Gaps = 18/508 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-- 124
           + +I  L K    D   +  + + S  V      +  +ISG  K G+ EKA E   +M  
Sbjct: 101 NVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K     PD+  YN ++N  +R      A A   +M      P+++T ++L++G+ K G  
Sbjct: 161 KGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDV 220

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A+++LD M   G +P+  TY  +I  LC   +  EA  +   M    CSPD V +N L
Sbjct: 221 EEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTL 277

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+GFCK   +  AL +L    ++  +P + +Y+ L++GL R  +   A+    ++  +  
Sbjct: 278 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 337

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDV+ Y  ++ GL ++G++++A KL+ +M  RG       Y++L+ G+C  G + +AR 
Sbjct: 338 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKARE 397

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  E+   + +P   T+ I++ G+ ++G +  A  L + +   G  P V  +N LIDGLC
Sbjct: 398 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KA  + +A  L  +M            S+G     +  +L ++V   C  G +  A+ ++
Sbjct: 458 KANRVREACDLADEMA-----------SRGC--FPNDVTLGSVVFGLCRVGRVDDAWSLV 504

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           ++++   + P+++ Y SLI+G CK   ++ A  +   ++ +G+  D   Y  LI  +   
Sbjct: 505 VEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHG 564

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            R  +A  ++ +M   G  P  +  K+L
Sbjct: 565 GRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 247/519 (47%), Gaps = 55/519 (10%)

Query: 178 LSKSGKTEVAIKMLD-EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           + +S + ++AI+  D    Q G   +  +Y  ++  L +        +++  +  SGCSP
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSP 60

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V +  L+ G CK  +   AL  LR+ ++    P +  ++ LI GLF+    D+A   +
Sbjct: 61  NLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIKGFC 354
             M   +++P++V Y  +I GL ++G ++ A +LL +M  +G    PD   YN LI  F 
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               + +A + + ++      P+  T  IL+ G+C++G V++A ++ + M+ AG  P V 
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N++I  LC AG++ +A  +   M                    D  +  T+++ +C A
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMSCSP----------------DLVTFNTLLDGFCKA 284

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G++ +A ++L ++     LPD+ITY  L+NG C+VG +  A  L +E+  +G  PD + Y
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            +L++GL +    E+A ++  +M   GC     +Y SL++  CR                
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR---------------- 388

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKE 653
                              G V  A + L EM   +N    L  Y I L GL +DG + +
Sbjct: 389 ------------------AGNVHKAREILAEM-VSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           A+++ S LV    +    +   LI GLCK   +  A D+
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 468



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 234/526 (44%), Gaps = 59/526 (11%)

Query: 217 NRADEAYRLF-LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           +R D A + F    +  G   D  +YN LL+   K         + +     G  P L +
Sbjct: 5   SRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVT 64

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           +  LI G  +A +   A  + R + E  + PDV ++ V+I GL + G    A+KL  +M 
Sbjct: 65  FKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENME 124

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR--DSLPNTHTFTILICGMCRNGM 393
              + P+   YN +I G C  G L++AR L  E+ ++   S P+  T+  LI    R   
Sbjct: 125 SSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASR 184

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           + +A     KM+ AG  P V   N L+ G+CK G++E+A  +   M++            
Sbjct: 185 IREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA----------- 233

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
               V D  +  +++   C AG + +A +IL  ++ S   PD++T+N+L++GFCK G + 
Sbjct: 234 --GPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLP 288

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL++ +E+  + + PD +TY  L+NGL RV + + AF +  ++ + G  P    Y SL+
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 348

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C+                                   GE+E A + + EM  +    
Sbjct: 349 DGLCK----------------------------------SGEIEEAHKLVKEMSVRGCRT 374

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMD 691
            +  Y+  + G C+ G V +A  I + +V    +  PP  +   ++ GL K G +  A+ 
Sbjct: 375 GVVMYSSLVSGYCRAGNVHKAREILAEMVSINMV--PPLFTYNIVLGGLIKDGSISKAVS 432

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           +    +  G++  P V  Y        K N+   A  L   M S G
Sbjct: 433 LISDLVARGYV--PDVVTYNTLIDGLCKANRVREACDLADEMASRG 476



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 132/340 (38%), Gaps = 42/340 (12%)

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           HD  S   +++    +G   +  K+   L  SG  P+++T+  LI G CK G    AL+ 
Sbjct: 25  HDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEF 84

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            + L    + PD   +  LI+GL +    + A ++F  M  +   P    Y ++++  C+
Sbjct: 85  LRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCK 144

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                 A  L  + +R   G+    + +    I  F +   +  A     +M     +  
Sbjct: 145 SGNLEKARELLEEMIRK-GGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVL-------------------------VECKAIVT 669
           +    I + G+C+DG V+EAL I   +                         VE   I+ 
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263

Query: 670 PPSCV-------KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
             SC         L+ G CK G L  A++V     +   +  P V  Y +      +  +
Sbjct: 264 TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL--PDVITYTILVNGLCRVGQ 321

Query: 723 KVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
              A++LL  +   GY  D   Y    SL+ G   + E+E
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAY---TSLVDGLCKSGEIE 358


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 174/589 (29%), Positives = 282/589 (47%), Gaps = 64/589 (10%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q D  +YN +LN+        L  +VY EM      P++VTF+ L+  L ++ +   
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ ML+EM+ RG+ P++ T+T ++ G  +    + A R+  +M + GCS   V  N L+N
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CKL RV++AL  ++    DGF P   +Y+  ++GL +      A      M +E  +P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++  L + G++++A  +L+ M +RG +PD   +N LI   C    L++A  L 
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+ +TF ILI  +C+ G    A +LF +M+ +GC P    +N LID LC  
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 427 GELEKANLLFYKMEIGKNP-------TLF------LRLSQGGNRVHDKASLQ-------- 465
           G+L KA  L   ME    P       T+       +R+ +    V D+  LQ        
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE-AEEVFDQMDLQGISRNAIT 406

Query: 466 --TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C    I  A++++ Q+   G  P+ ITYNS++  +CK G+I  A  + + + 
Sbjct: 407 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 466

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G   D VTYGTLINGL +  R + A ++   M   G  P+P  Y  ++    RR    
Sbjct: 467 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 526

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A SL+                   E  + GE  +A+                 Y I   
Sbjct: 527 DALSLF------------------REMAEVGEPPDAL----------------TYKIVFR 552

Query: 644 GLCQ-DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           GLC+  G +KEA +    +V+ K  +   S  +++      G L+L MD
Sbjct: 553 GLCRGGGPIKEAFDFMLEMVD-KGFIPEFSSFRML----AEGLLNLGMD 596



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    +      A+    +M      PD   +  ++     +     AL V   M
Sbjct: 91  TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++ C    VT ++LING  K G+ E A+  + +    G  P++ TY   ++GLCQ +  
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A ++   M   G  PD   YN ++N  CK  +++EA  +L      G +P + +++ L
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L    R +EA    R++  + + PDV  + ++I  L + G    A++L  +M+  G 
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C LG L +A  L  ++       +T T+  +I G+C+   +++A++
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 390

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F++M+  G   +   FN LIDGLCK  +++ A  L  +M           +S+G     
Sbjct: 391 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM-----------ISEGLQ--P 437

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  YC  G I KA  IL  +  +G   D++TY +LING CK G    ALK+ 
Sbjct: 438 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 497

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + +++KG+RP    Y  ++  L R +   DA  +F +M + G  P    YK +    CR
Sbjct: 498 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 237/549 (43%), Gaps = 51/549 (9%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  +   Y  +++ L + ++      ++ +M   G  PD V +N L+   C+  +V  A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + +L      G  P   +++ L+ G       + A     +M E       V   V+I G
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G+V+DA+  +      G  PD   YN  + G C    +  A  +   + +    P+
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ I++  +C+NG +++A+ + N+M   GC P +  FN LI  LC    LE+A  L  
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 438 KMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           ++ + G +P ++              +   ++   C  G  H A ++  ++  SG  PD 
Sbjct: 289 QVTVKGVSPDVY--------------TFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TYN+LI+  C +G +  AL L K+++  G    ++TY T+I+GL +  R E+A  +F Q
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M   G + +   + +L+   C+ +K   AF L  Q               I E LQ   +
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM--------------ISEGLQPNNI 440

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
                                Y   L   C+ G +K+A +I   +      V   +   L
Sbjct: 441 --------------------TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I+GLCK G   +A+ V       G    P+  N +L+S LF ++N +  A  L   M  V
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS-LFRRNNIR-DALSLFREMAEV 538

Query: 737 GYDLDACLY 745
           G   DA  Y
Sbjct: 539 GEPPDALTY 547



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 11/273 (4%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    +   +  D++    +S  +  F  LI G  K    + A E 
Sbjct: 367 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLS 179
             +M     QP+   YN++L   + KQ  +   A   E +  N    ++VT+  LINGL 
Sbjct: 427 INQMISEGLQPNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K+G+T+VA+K+L  M  +G+ P    Y  V+  L + N   +A  LF +M + G  PD +
Sbjct: 486 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 545

Query: 240 AYNALLNGFCKLRR-VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            Y  +  G C+    + EA   +      GF+P   S+  L +GL      D+ +    +
Sbjct: 546 TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG-MDDYFIRAIE 604

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAM 328
           +  EK+   E DV      IRG  +  K  DA+
Sbjct: 605 IIMEKVDLRESDV----SAIRGYLKIRKFYDAL 633



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 46/229 (20%), Positives = 88/229 (38%), Gaps = 37/229 (16%)

Query: 518 LFKELQ-LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +  +LQ L G++ D+V Y  L+N L    + +    ++ +M   G  P    + +LM   
Sbjct: 40  ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 99

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           CR  +   A  +                  +EE   +G   +                  
Sbjct: 100 CRAHQVRTAVLM------------------LEEMSSRGVAPDE----------------T 125

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            +T  + G  ++G ++ AL + + ++E     T  +   LI+G CK G ++ A+      
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + +GF       N  +  L   +++   HA  ++  M   G+D D   Y
Sbjct: 186 IADGFEPDQITYNTFVNGL--CQNDHVGHALKVMDVMVQEGHDPDVFTY 232


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/589 (29%), Positives = 282/589 (47%), Gaps = 64/589 (10%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q D  +YN +LN+        L  +VY EM      P++VTF+ L+  L ++ +   
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ ML+EM+ RG+ P++ T+T ++ G  +    + A R+  +M + GCS   V  N L+N
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CKL RV++AL  ++    DGF P   +Y+  ++GL +      A      M +E  +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++  L + G++++A  +L+ M +RG +PD   +N LI   C    L++A  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+ +TF ILI  +C+ G    A +LF +M+ +GC P    +N LID LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GELEKANLLFYKMEIGKNP-------TLF------LRLSQGGNRVHDKASLQ-------- 465
           G+L KA  L   ME    P       T+       +R+ +    V D+  LQ        
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE-AEEVFDQMDLQGISRNAIT 498

Query: 466 --TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C    I  A++++ Q+   G  P+ ITYNS++  +CK G+I  A  + + + 
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G   D VTYGTLINGL +  R + A ++   M   G  P+P  Y  ++    RR    
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A SL+                   E  + GE  +A+                 Y I   
Sbjct: 619 DALSLF------------------REMAEVGEPPDALT----------------YKIVFR 644

Query: 644 GLCQ-DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           GLC+  G +KEA +    +V+ K  +   S  +++      G L+L MD
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVD-KGFIPEFSSFRML----AEGLLNLGMD 688



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    +      A+    +M      PD   +  ++     +     AL V   M
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++ C    VT ++LING  K G+ E A+  + +    G  P++ TY   ++GLCQ +  
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A ++   M   G  PD   YN ++N  CK  +++EA  +L      G +P + +++ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L    R +EA    R++  + + PDV  + ++I  L + G    A++L  +M+  G 
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C LG L +A  L  ++       +T T+  +I G+C+   +++A++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F++M+  G   +   FN LIDGLCK  +++ A  L  +M           +S+G     
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM-----------ISEGLQ--P 529

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  YC  G I KA  IL  +  +G   D++TY +LING CK G    ALK+ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + +++KG+RP    Y  ++  L R +   DA  +F +M + G  P    YK +    CR
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/639 (24%), Positives = 266/639 (41%), Gaps = 73/639 (11%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSG---KTE 185
           QPD      +LN A  +  F     VY E++ KL  +  +    +L+  + + G   K  
Sbjct: 51  QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLG 110

Query: 186 VAIKMLDEMTQR------------------GILPNKFTYTIVISGLCQINRADEAYRLFL 227
           V    LD    +                  GI  +   Y  +++ L + ++      ++ 
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   G  PD V +N L+   C+  +V  A+ +L      G  P   +++ L+ G     
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEG 230

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             + A     +M E       V   V+I G  + G+V+DA+  +      G  PD   YN
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             + G C    +  A  +   + +    P+  T+ I++  +C+NG +++A+ + N+M   
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQT 466
           GC P +  FN LI  LC    LE+A  L  ++ + G +P ++              +   
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY--------------TFNI 396

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G  H A ++  ++  SG  PD +TYN+LI+  C +G +  AL L K+++  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
               ++TY T+I+GL +  R E+A  +F QM   G + +   + +L+   C+ +K   AF
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L  Q               I E LQ   +                     Y   L   C
Sbjct: 517 ELINQM--------------ISEGLQPNNI--------------------TYNSILTHYC 542

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G +K+A +I   +      V   +   LI+GLCK G   +A+ V       G    P+
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N +L+S LF ++N +  A  L   M  VG   DA  Y
Sbjct: 603 AYNPVLQS-LFRRNNIR-DALSLFREMAEVGEPPDALTY 639



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 11/273 (4%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    +   +  D++    +S  +  F  LI G  K    + A E 
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLS 179
             +M     QP+   YN++L   + KQ  +   A   E +  N    ++VT+  LINGL 
Sbjct: 519 INQMISEGLQPNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K+G+T+VA+K+L  M  +G+ P    Y  V+  L + N   +A  LF +M + G  PD +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            Y  +  G C+    + EA   +      GF+P   S+  L +GL      D+ +    +
Sbjct: 638 TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG-MDDYFIRAIE 696

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAM 328
           +  EK+   E DV      IRG  +  K  DA+
Sbjct: 697 IIMEKVDLRESDV----SAIRGYLKIRKFYDAL 725


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/591 (29%), Positives = 283/591 (47%), Gaps = 64/591 (10%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q D  +YN +LN+        L  +VY EM      P++VTF+ L+  L ++ +   
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ ML+EM+ RG+ P++ T+T ++ G  +    + A R+  +M + GCS   V  N L+N
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CKL RV++AL  ++    DGF P   +Y+  ++GL +      A      M +E  +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++  L + G++++A  +L+ M +RG +PD   +N LI   C    L++A  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+ +TF ILI  +C+ G    A +LF +M+ +GC P    +N LID LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GELEKANLLFYKMEIGKNP-------TLF------LRLSQGGNRVHDKASLQ-------- 465
           G+L KA  L   ME    P       T+       +R+ +    V D+  LQ        
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE-AEEVFDQMDLQGISRNAIT 498

Query: 466 --TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C    I  A++++ Q+   G  P+ ITYNS++  +CK G+I  A  + + + 
Sbjct: 499 FNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G   D VTYGTLINGL +  R + A ++   M   G  P+P  Y  ++    RR    
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A SL+                   E  + GE  +A+                 Y I   
Sbjct: 619 DALSLF------------------REMAEVGEPPDALT----------------YKIVFR 644

Query: 644 GLCQ-DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           GLC+  G +KEA +    +V+ K  +   S  +++      G L+L MD +
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVD-KGFIPEFSSFRML----AEGLLNLGMDDY 690



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    +      A+    +M      PD   +  ++     +     AL V   M
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++ C    VT ++LING  K G+ E A+  + +    G  P++ TY   ++GLCQ +  
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A ++   M   G  PD   YN ++N  CK  +++EA  +L      G +P + +++ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L    R +EA    R++  + + PDV  + ++I  L + G    A++L  +M+  G 
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C LG L +A  L  ++       +T T+  +I G+C+   +++A++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F++M+  G   +   FN LIDGLCK  +++ A  L  +M           +S+G     
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQM-----------ISEGLQ--P 529

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  YC  G I KA  IL  +  +G   D++TY +LING CK G    ALK+ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + +++KG+RP    Y  ++  L R +   DA  +F +M + G  P    YK +    CR
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/639 (24%), Positives = 266/639 (41%), Gaps = 73/639 (11%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSG---KTE 185
           QPD      +LN A  +  F     VY E++ KL  +  +    +L+  + + G   K  
Sbjct: 51  QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLG 110

Query: 186 VAIKMLDEMTQR------------------GILPNKFTYTIVISGLCQINRADEAYRLFL 227
           V    LD    +                  GI  +   Y  +++ L + ++      ++ 
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   G  PD V +N L+   C+  +V  A+ +L      G  P   +++ L+ G     
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             + A     +M E       V   V+I G  + G+V+DA+  +      G  PD   YN
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             + G C    +  A  +   + +    P+  T+ I++  +C+NG +++A+ + N+M   
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQT 466
           GC P +  FN LI  LC    LE+A  L  ++ + G +P ++              +   
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY--------------TFNI 396

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G  H A ++  ++  SG  PD +TYN+LI+  C +G +  AL L K+++  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
               ++TY T+I+GL +  R E+A  +F QM   G + +   + +L+   C+ +K   AF
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L  Q               I E LQ   +                     Y   L   C
Sbjct: 517 ELINQM--------------ISEGLQPNNI--------------------TYNSILTHYC 542

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G +K+A +I   +      V   +   LI+GLCK G   +A+ V       G    P+
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N +L+S LF ++N +  A  L   M  VG   DA  Y
Sbjct: 603 AYNPVLQS-LFRRNNIR-DALSLFREMAEVGEPPDALTY 639



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 11/273 (4%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    +   +  D++    +S  +  F  LI G  K    + A E 
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLS 179
             +M     QP+   YN++L   + KQ  +   A   E +  N    ++VT+  LINGL 
Sbjct: 519 INQMISEGLQPNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K+G+T+VA+K+L  M  +G+ P    Y  V+  L + N   +A  LF +M + G  PD +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            Y  +  G C+    + EA   +      GF+P   S+  L +GL      D+ +    +
Sbjct: 638 TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG-MDDYFIRAIE 696

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAM 328
           +  EK+   E DV      IRG  +  K  DA+
Sbjct: 697 IIMEKVDLRESDV----SAIRGYLKIRKFYDAL 725


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 258/503 (51%), Gaps = 18/503 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L +++   +S   D+F  +I+ Y +VG  E+AL+ F +++EF CQP V IYN +L+    
Sbjct: 102 LQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLS 161

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +  F +   +Y  M +    PN+ T+++L+  L K+ + + A K+L EM+ +G  P+  +
Sbjct: 162 ENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVS 221

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT VIS + ++ + +EA  L ++ +     P+   YNAL+NGFC+  +V E   LL    
Sbjct: 222 YTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCREYKVKEVFLLLGQMV 276

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + +YS +I  L      + A A + KMF     P+V  +  +++G    G+V 
Sbjct: 277 EKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVL 336

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ + + M E G  P+   YN LI G C  G + +A S+  ++ +    PN  T+  LI
Sbjct: 337 EALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALI 396

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G  + G +  A +++NKM   GC P+V ++ ++++ LC++    +A  L  KM     P
Sbjct: 397 DGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCP 456

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +  +  T ++  C +G +  A  +  Q+ + G  P+I TYN +++G
Sbjct: 457 P-------------NTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             K   I  AL+L  E++ KG+  + VTY T+  G   V + E+A ++ G+M   G  P 
Sbjct: 504 LLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPD 563

Query: 566 PAVYKSLMTWSCRRRKFSLAFSL 588
              Y +L    C + K   A  L
Sbjct: 564 AITYNTLTYAYCMQGKVKTAIQL 586



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 244/539 (45%), Gaps = 27/539 (5%)

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSPDFVAYNALLNGFCKLRRVDEALAL 260
           + TY I+I  L +    D    L  +MK  G  CS D   +  ++N + ++   ++AL +
Sbjct: 79  QLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAEQALKM 136

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                + G  P +  Y+ L+D +    R+      Y  M  +  EP+V  Y ++++ L +
Sbjct: 137 FYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCK 196

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             +V  A KLL +M  +G  PD   Y  +I     LG +++AR L +        PN   
Sbjct: 197 NNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSV 251

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +  LI G CR   V +   L  +M + G  P+V  ++ +I  L   G +E A  ++ KM 
Sbjct: 252 YNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMF 311

Query: 441 I-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G +P ++              +  ++++ Y   G + +A  I  ++AE G  P+++ Y
Sbjct: 312 VRGCSPNVY--------------TFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAY 357

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N+LI+G C  G +  A+ +  +++  G  P+  TYG LI+G  +      A  I+ +M  
Sbjct: 358 NTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVEN 618
           NGC P+  VY S++   CR   FS A+SL  +   D    +  +  + I+     G VE 
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           AI    +M+       +  Y   L GL ++ ++KEAL + + + E    +   +   +  
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFG 537

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           G C  G  + A+ +    L  G  ++P    Y   +  +    K   A  LL ++ + G
Sbjct: 538 GFCNVGKFEEALKLLGKMLVGG--VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/583 (24%), Positives = 260/583 (44%), Gaps = 47/583 (8%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T+ ++I  L +    +    +L +M   GI  ++  +  VI+   ++  A++A ++F +
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +++ GC P    YN LL+      R      +  + ++DG  P + +Y+ L+  L +  R
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK------------------- 329
            D A     +M  +  EPDVV Y  +I  +S+ GKV++A +                   
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGF 259

Query: 330 -----------LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
                      LL  M E+GI P+   Y+ +I     +G ++ A ++  +++ R   PN 
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           +TFT L+ G    G V +A  ++N+M + G  P+V  +N LI GLC  G++ +A  +  K
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 439 MEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           ME  G +P +              ++   +++ +  AG +  A +I  ++  +G +P+++
Sbjct: 380 MERNGCSPNV--------------STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVV 425

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            Y S++N  C+    + A  L +++      P++VT+ T I GL    R E A  +F QM
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEV 616
            Q GC+P+   Y  ++    +  +   A  L  +        +  +  +I   F   G+ 
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL-VECKAIVTPPSCVK 675
           E A++ L +M           Y       C  G+VK A+ +   L    K +    +   
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTS 605

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           L+ G+C +  ++ A+      L  G  L     N L+R L  S
Sbjct: 606 LLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 163/324 (50%), Gaps = 1/324 (0%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+ GY+  G   +AL  + +M E   +P+V  YN +++          A++V  +M 
Sbjct: 322 FTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKME 381

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+ T+  LI+G +K+G    A ++ ++M   G +PN   YT +++ LC+ +   
Sbjct: 382 RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ L  KM    C P+ V +N  + G C   RV+ A+ L    E+ G  P + +Y+ ++
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL +  R  EA     +M E+ +E ++V Y  +  G    GK ++A+KLL  M   G+ 
Sbjct: 502 DGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQK 399
           PD   YN L   +C  G +  A  L  ++      +P    +T L+ G+C    V++A  
Sbjct: 562 PDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVL 621

Query: 400 LFNKMEKAGCFPSVGMFNALIDGL 423
             +KM   G   +   +NAL+ GL
Sbjct: 622 YLDKMLNEGICLNAATWNALVRGL 645



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           S NVS     +  LI G+ K GD   A E + KM    C P+V +Y +++N+  R  +F 
Sbjct: 386 SPNVST----YGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A ++  +M   NC PN VTF+  I GL  SG+ E AI +  +M Q G  PN  TY  V+
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG-- 268
            GL + NR  EA  L  +M++ G   + V YN +  GFC + + +EAL LL      G  
Sbjct: 502 DGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561

Query: 269 ----------------------------------FVPRLGSYSCLIDGLFRAKRYDEAYA 294
                                             +VP + +Y+ L+ G+      +EA  
Sbjct: 562 PDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVL 621

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +  KM  E I  +   +  ++RGL  +      + +L D+   G
Sbjct: 622 YLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 1/221 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++++L + + F   W  ++++ + N    +  F   I G    G  E A+  F +M++
Sbjct: 428 TSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQ 487

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + C P++  YN VL+   ++     AL +  EM +     N+VT++ +  G    GK E 
Sbjct: 488 YGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEE 547

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALL 245
           A+K+L +M   G+ P+  TY  +    C   +   A +L  K+   G   P+  AY +LL
Sbjct: 548 ALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLL 607

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            G C    V+EA+  L     +G      +++ L+ GLF +
Sbjct: 608 WGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNS 648


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 209/735 (28%), Positives = 327/735 (44%), Gaps = 120/735 (16%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+   K G   +A     ++ ++D  PDV+ Y +++    R +   LA  V+  M
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK  C PN VT+S LINGL   G+ + A+ ML+EM ++GI P  +TYT+ I+ LC I   
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  +MK  GC P+   Y AL++G  +L +++ A+ L     K+G VP   +Y+ L
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421

Query: 280 IDGLFRAKRYDEA---YAW--------------------------------YRKMFEEKI 304
           I+ L    R+  A   + W                                + KM +   
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P VV Y  +I G    G V +A +LL  M+E G  PD + YN L+ GF   G L+ A  
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
              E+ +    PN  ++T LI G  ++G VD A  L  +ME+ GC P+V  +NA+I+GL 
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           K     +A  +  KM E G  P +               +  T+++  C  G    A+KI
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVI--------------TYTTLIDGLCRNGRTQFAFKI 647

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN---- 539
              + +   LP++ TY+SLI G C+ G  + A  L KE++ KGL PD VT+ +LI+    
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707

Query: 540 -------------------------------GLQR----------VDRE----------- 547
                                          GLQ+          V  E           
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKD 767

Query: 548 ---EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----D 600
              E    +  +M + GC P+   Y +L++  CR+ +F  A     Q ++D+  R    D
Sbjct: 768 VNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA----EQLVKDMKERGFCPD 823

Query: 601 DESMKSIE-EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            E   S+     +  EV++A++    ++ K     L+ Y   +  LC+ GQV+EA  +F 
Sbjct: 824 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 883

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            ++E +          L+ GL K G LDL M +        F   P +  Y++     S+
Sbjct: 884 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT--PNIQTYVILGRELSR 941

Query: 720 DNKKVHAYHLLCRMK 734
             K + +  L  ++K
Sbjct: 942 IGKSIESEPLADKLK 956



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 176/625 (28%), Positives = 295/625 (47%), Gaps = 45/625 (7%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           L+ L P L    V  ++   K+ +   +FF W +KR   +   + +  ISML +    D 
Sbjct: 108 LKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKH--NMNCFISMLNRLVR-DR 164

Query: 82  YWQTLDELR---------SGNVSVVSDVFFVLISGY---YKVGDC-------------EK 116
            +   D +R            +  V+D F   ISG    + +  C             E 
Sbjct: 165 VFAPADHIRILMIKACRNEEEIRRVAD-FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEG 223

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A   + +M     QP +  +N ++NI  +K     A  +  ++ + +  P++ T++ LI 
Sbjct: 224 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 283

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  ++   ++A  + D M + G  PN  TY+ +I+GLC   R DEA  +  +M + G  P
Sbjct: 284 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 343

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               Y   +   C +   +EA+ L+   +K G  P + +Y+ LI GL R  + + A   Y
Sbjct: 344 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 403

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM +E + P+ V Y  +I  L   G+   A+K+   M   G + +T  YN +IKG C  
Sbjct: 404 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 463

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +++A  L  ++ K   LP   T+  LI G    G V++A +L + M++ GC P    +
Sbjct: 464 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N L+ G  K G+LE A+  F +M E G NP              +  S  T+++ +   G
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNP--------------NPVSYTTLIDGHSKDG 569

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A  +L ++ E G  P++ +YN++ING  K    + A K+  ++  +GL P+ +TY 
Sbjct: 570 KVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYT 629

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           TLI+GL R  R + AF+IF  M +  C P+   Y SL+   C+  K   A  L  +  R 
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689

Query: 596 ISGRDDESMKS-IEEFLQKGEVENA 619
               D+ +  S I+ F+  G +++A
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHA 714



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 209/462 (45%), Gaps = 83/462 (17%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSG----------------------NVSVVSDVF 101
            +N+A +  L+K NG +    T +EL SG                      N + VS  +
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS--Y 558

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
             LI G+ K G  + AL    +M+E  C P+V  YNAV+N   ++  F  A  +  +M +
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              LPN++T++ LI+GL ++G+T+ A K+  +M +R  LPN +TY+ +I GLCQ  +ADE
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD-------------------------- 255
           A  L  +M+  G +PD V + +L++GF  L R+D                          
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738

Query: 256 -----------------EALALLRSFEKD----------------GFVPRLGSYSCLIDG 282
                            EA+      EKD                G  P L +YS L+ G
Sbjct: 739 GLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSG 798

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L R  R+ EA    + M E    PD  +Y  ++    +  +V  A+K+   +  +G    
Sbjct: 799 LCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLH 858

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y ALI   C  G +++A++L   + +++   +   +T+L+ G+ + G +D   KL +
Sbjct: 859 LSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH 918

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
            ME     P++  +  L   L + G+  ++  L  K+++ K+
Sbjct: 919 IMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKD 960


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 174/591 (29%), Positives = 282/591 (47%), Gaps = 64/591 (10%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q D  +YN +LN+        L  +VY EM      P++VTF+ L+  L ++ +   
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ ML+EM+ RG+ P++ T+T ++ G  +    + A R+  +M + GCS   V  N L+N
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CKL RV++AL  ++    DGF P   +Y+  ++GL +      A      M +E  +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++  L + G++++A  +L+ M +RG +PD   +N LI   C    L++A  L 
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+ +TF ILI  +C+ G    A +LF +M+ +GC P    +N LID LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 427 GELEKANLLFYKMEIGKNP-------TLF------LRLSQGGNRVHDKASLQ-------- 465
           G+L KA  L   ME    P       T+       +R+ +    V D+  LQ        
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE-AEEVFDQMDLQGISRNAIT 498

Query: 466 --TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C    I  A+ ++ Q+   G  P+ ITYNS++  +CK G+I  A  + + + 
Sbjct: 499 FNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMT 558

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G   D VTYGTLINGL +  R + A ++   M   G  P+P  Y  ++    RR    
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIR 618

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A SL+                   E  + GE  +A+                 Y I   
Sbjct: 619 DALSLF------------------REMAEVGEPPDALT----------------YKIVFR 644

Query: 644 GLCQ-DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           GLC+  G +KEA +    +V+ K  +   S  +++      G L+L MD +
Sbjct: 645 GLCRGGGPIKEAFDFMLEMVD-KGFIPEFSSFRML----AEGLLNLGMDDY 690



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 13/479 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    +      A+    +M      PD   +  ++     +     AL V   M
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++ C    VT ++LING  K G+ E A+  + +    G  P++ TY   ++GLCQ +  
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A ++   M   G  PD   YN ++N  CK  +++EA  +L      G +P + +++ L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L    R +EA    R++  + + PDV  + ++I  L + G    A++L  +M+  G 
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C LG L +A  L  ++       +T T+  +I G+C+   +++A++
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEE 482

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F++M+  G   +   FN LIDGLCK  +++ A  L  +M           +S+G     
Sbjct: 483 VFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQM-----------ISEGLQ--P 529

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  YC  G I KA  IL  +  +G   D++TY +LING CK G    ALK+ 
Sbjct: 530 NNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVL 589

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + +++KG+RP    Y  ++  L R +   DA  +F +M + G  P    YK +    CR
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/639 (24%), Positives = 266/639 (41%), Gaps = 73/639 (11%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSG---KTE 185
           QPD      +LN A  +  F     VY E++ KL  +  +    +L+  + + G   K  
Sbjct: 51  QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLG 110

Query: 186 VAIKMLDEMTQR------------------GILPNKFTYTIVISGLCQINRADEAYRLFL 227
           V    LD    +                  GI  +   Y  +++ L + ++      ++ 
Sbjct: 111 VVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYS 170

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   G  PD V +N L+   C+  +V  A+ +L      G  P   +++ L+ G     
Sbjct: 171 EMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEG 230

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             + A     +M E       V   V+I G  + G+V+DA+  +      G  PD   YN
Sbjct: 231 SIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             + G C    +  A  +   + +    P+  T+ I++  +C+NG +++A+ + N+M   
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQT 466
           GC P +  FN LI  LC    LE+A  L  ++ + G +P ++              +   
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY--------------TFNI 396

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G  H A ++  ++  SG  PD +TYN+LI+  C +G +  AL L K+++  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
               ++TY T+I+GL +  R E+A  +F QM   G + +   + +L+   C+ +K   AF
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L  Q               I E LQ   +                     Y   L   C
Sbjct: 517 GLINQM--------------ISEGLQPNNI--------------------TYNSILTHYC 542

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G +K+A +I   +      V   +   LI+GLCK G   +A+ V       G    P+
Sbjct: 543 KQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N +L+S LF ++N +  A  L   M  VG   DA  Y
Sbjct: 603 AYNPVLQS-LFRRNNIR-DALSLFREMAEVGEPPDALTY 639



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 11/273 (4%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    +   +  D++    +S  +  F  LI G  K    + A   
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLS 179
             +M     QP+   YN++L   + KQ  +   A   E +  N    ++VT+  LINGL 
Sbjct: 519 INQMISEGLQPNNITYNSILT-HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K+G+T+VA+K+L  M  +G+ P    Y  V+  L + N   +A  LF +M + G  PD +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637

Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            Y  +  G C+    + EA   +      GF+P   S+  L +GL      D+ +    +
Sbjct: 638 TYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG-MDDYFIRAIE 696

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAM 328
           +  EK+   E DV      IRG  +  K  DA+
Sbjct: 697 IIMEKVDLRESDV----SAIRGYLKIRKFYDAL 725


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 291/597 (48%), Gaps = 27/597 (4%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++ M   P    L+ Q    L+S  +S     F +LI+ Y+       A      + + 
Sbjct: 64  AIVRMGHYPTAISLFTQ----LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKS 119

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             QP++  +N ++N      +   AL     ++    L +  T+  LINGLSK+G+ + A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + +L EM +  + PN   Y+ +I GLC+     +A  L  ++ + G   D V YN+L++G
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDG 239

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C + R  E   LL    ++   P   +++ LID L +  R  EA      M +   +PD
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  ++ G      V +A +L + M +RG+ PD   YN LI G+C   ++D+A  L  
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  ++ +P   ++  LI G+C +G +   +KL ++M  +   P V  +N LID LCK G
Sbjct: 360 ELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419

Query: 428 E-LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             LE   +L   M+ G  P +               +   M++ YC    ++ A  I  +
Sbjct: 420 RILEALGVLVMMMKKGVKPNI--------------VTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + +SG  PDI+ YN LING+CK   ++ A+ LFKE++ K L PD  +Y +LI+GL  + R
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
                 +  +M  +G +P    Y  L+   C+ + F  A SL+ Q +  I   D  +  +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI-WPDFYTNHA 584

Query: 607 IEEFLQKGE----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           I + L KGE     E+A++ LL      N   +  YTI +  LC+DG   EA+ + S
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPN---VQTYTILINALCKDGSFGEAMLLLS 638



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 243/516 (47%), Gaps = 47/516 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G  K G  + AL    +M++   QP++ +Y+A+++   +      AL +  ++
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   L + VT++ LI+G    G+ +   ++L +M +  + P+ +T+ I+I  LC+  R 
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +   M   G  PD V YNAL+ G+C    V EA  L     K G  P + +Y+ L
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  + K  DEA   ++++  + + P +  Y  +I GL  +G++    KLL +M     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C  G + +A  + V + K+   PN  T+  ++ G C    V+ A+ 
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +FN+M K+G  P +  +N LI+G CK   +++A +LF +M             +  N + 
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-------------RHKNLIP 508

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D AS  ++++  C  G I    ++L ++ +SG  PD+ITYN L++ FCK    + A+ LF
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568

Query: 520 ----------------------------------KELQLKGLRPDSVTYGTLINGLQRVD 545
                                             K L + G  P+  TY  LIN L +  
Sbjct: 569 RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
              +A  +  +M  N   P    ++ ++    +R +
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 260/548 (47%), Gaps = 24/548 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+  +  MV++   P    F  L+  + + G    AI +  ++  +GI P+  T+TI+I+
Sbjct: 39  AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                +    A+ L   +  SG  P+ V +N ++NGFC    + +AL   ++    G++ 
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y  LI+GL +  +   A    ++M +  ++P++V+Y  +I GL + G V DA+ L 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S + ERGI+ D   YN+LI G C +G   +   L  ++ + +  P+ +TF ILI  +C+ 
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G + +AQ +   M K G  P +  +NAL++G C    + +A  LF +M + G  P     
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP----- 333

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   +++ YC   ++ +A  +  +L     +P I +YNSLI+G C  G
Sbjct: 334 ---------DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+   KL  E+      PD VTY  LI+ L +  R  +A  +   M + G  P+   Y 
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMD 627
           ++M   C R   ++A  ++ + ++  SG + + +     I  + +   V+ AI    EM 
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVK--SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGY 685
            K     +A Y   + GLC  G++     +   +  C +  +P       L+   CK   
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM--CDSGQSPDVITYNILLDAFCKTQP 560

Query: 686 LDLAMDVF 693
            D A+ +F
Sbjct: 561 FDKAISLF 568



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 56/498 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+   +V     ++  LI G  K G    AL    ++ E     D   YN++++    
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     +  +MV+ N  P+  TF++LI+ L K G+   A  +L  M++RG  P+  T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++ G C      EA  LF +M   G  PD + YN L++G+CK + VDEA+ L +   
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               VP + SY+ LIDGL  + R         +M      PDVV Y ++I  L + G++ 
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ +L  M ++G+ P+   YNA++ G+C    ++ A+ +   + K    P+   + +LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G C+  MVD+A  LF +M      P +  +N+LIDGLC  G +     L  +M + G++
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 445 P----------------------TLFLRLSQG-------GNRVHDK-------------- 461
           P                      +LF ++ +G        + + D               
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 462 ---------ASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     ++QT   ++   C  G   +A  +L ++ ++   PD IT+  +I    + 
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662

Query: 510 GNINGALKLFKELQLKGL 527
              + A KL +E+  +GL
Sbjct: 663 NETDKAEKLREEMIARGL 680



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 218/497 (43%), Gaps = 49/497 (9%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+    D+A   F +M      P    ++ LL    ++     A++L    +  G  P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++ LI+  F       A++    + +   +P++V +  +I G    G +  A+    +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +  +G + D + Y  LI G    G +  A  L  E+ K    PN   ++ LI G+C++G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           V DA  L +++ + G       +N+LIDG C  G  ++   L  KM         +R   
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM---------VR--- 258

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   D  +   +++  C  G I +A  +L  +++ G  PDI+TYN+L+ G+C   N++
Sbjct: 259 -ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +LF  +  +GL PD + Y  LI+G  +    ++A  +F ++      P+ A Y SL+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C                   SGR     K ++E     +  + +             
Sbjct: 378 DGLCN------------------SGRISHVKKLLDEMHGSAQPPDVVT------------ 407

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
               Y I +  LC++G++ EAL +  ++++        +   ++ G C R  +++A D+F
Sbjct: 408 ----YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 694 LYTLKNGFILRPRVCNY 710
              +K+G  L P + NY
Sbjct: 464 NRMVKSG--LEPDILNY 478



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 121/241 (50%), Gaps = 1/241 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ GY    +   A + F +M +   +PD+  YN ++N   + ++   A+ ++ EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              N +P+I +++ LI+GL   G+     ++LDEM   G  P+  TY I++   C+    
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  LF ++ + G  PDF   +A+++  CK  ++  A   L+     G  P + +Y+ L
Sbjct: 562 DKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L +   + EA     KM +    PD + + ++I  L +  +   A KL  +M  RG+
Sbjct: 621 INALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680

Query: 340 V 340
           V
Sbjct: 681 V 681



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 1/183 (0%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R  N+      +  LI G   +G      E   +M +    PDV  YN +L+   + Q
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            F  A++++ ++V+    P+  T   +++ L K  K ++A   L  +   G  PN  TYT
Sbjct: 560 PFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I+ LC+     EA  L  KM+D+   PD + +  ++    +    D+A  L       
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678

Query: 268 GFV 270
           G V
Sbjct: 679 GLV 681



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           ++  LEP    L+   + +   KT+        F     +  +   AS +++I  L    
Sbjct: 467 VKSGLEP--DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + LDE+     S     + +L+  + K    +KA+  F ++ E    PD Y  +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNH 583

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           A+++   + +   +A      ++   C PN+ T+++LIN L K G    A+ +L +M   
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN 643

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
              P+  T+ I+I  L Q N  D+A +L  +M   G
Sbjct: 644 DRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 296/611 (48%), Gaps = 32/611 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG Y++   E A++ F  M      P V  +N ++    R +   L +++Y +M +  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+T ++ GLC  +R  EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF ++    C PD + +  L+NG C+  RV EA+ALL    ++G  P   +Y   +DG+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I+P+VV+Y  +I GL + G+  D+  L  +M+++GI P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +I GFC  G    A+ L  E+ +R   PN  T+  LI    + G   +A +L++
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +N++IDG CK   L+ A  +FY M   G +P +F             
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF------------- 394

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++   G + + +TYN+LI+GFC VG++N AL L ++
Sbjct: 395 -TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   G+ PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L+       KF  A  L+ +   R I          I+   ++  ++ A Q  + M  K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +   + G C+ G+V + L +F  +     +      + LI+G  K G ++ A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 634 LDIFQEMISSG 644



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 275/574 (47%), Gaps = 63/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +  +L+          AL +++++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P+++TF+ L+NGL + G+   A+ +LD M + G+ P++ TY   + G+C++    
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++G CK  R  ++  L    +  G  P + +Y+C+
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+  A    ++M E KI P+VV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  YN++I GFC    LD A  +   +  +   P+  TFT LI G C    +DD  +
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G   +   +N LI G C  G+L  A  L  +M           +S G     
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM-----------ISSG--VCP 461

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD++TYN LI G   
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V +AI        
Sbjct: 582 FNTLINGYCK------------------AGRVDDGLELFCEMGRRGIVADAI-------- 615

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 616 --------IYITLIYGFRKVGNINGALDIFQEMI 641



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 244/491 (49%), Gaps = 27/491 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QPD   Y   ++   +    + AL +  +M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 160 VKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +++ + PN+V +S +I+GL K G+   +  +  EM  +GI PN  TY  +I G C   R
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A RL  +M +   SP+ V YNAL+N F K  +  EA  L       G +P   +Y+ 
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   PDV  +  +I G   A ++ D M+LL +M  RG
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V +T  YN LI GFC +G L+ A  L  ++      P+  T   L+ G+C NG + DA 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM-----PHR 538

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++ + +      P+++T+N+LING+C
Sbjct: 539 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  D++ Y TLI G ++V     A  IF +M  +G  P   
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650

Query: 568 VYKSLMT--WS 576
             ++++T  WS
Sbjct: 651 TIRNMLTGFWS 661



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 226/464 (48%), Gaps = 27/464 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +   + G  K+GD   AL    KM+E    +P+V IY+A+++   +      +  ++ E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PNIVT++ +I G   SG+   A ++L EM +R I PN  TY  +I+   +  +
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  L+ +M   G  P+ + YN++++GFCK  R+D A  +       G  P + +++ 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG   AKR D+      +M    +  + V Y  +I G    G +  A+ L   M   G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 339 IVPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSL-------PNTHTFTILICG 387
           + PD    N L+ G CD G L  A    +++Q      D+        P+  T+ ILICG
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPT 446
           +   G   +A++L+ +M   G  P    ++++IDGLCK   L++A  +F  M     +P 
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T++  YC AG +    ++  ++   G + D I Y +LI GF
Sbjct: 579 V--------------VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            KVGNINGAL +F+E+   G+ PD++T   ++ G    +  E A
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 176/367 (47%), Gaps = 11/367 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+    +S     +  LI+ + K G   +A E + +M      P+   YN++++   +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  ++Y M    C P++ TF+ LI+G   + + +  +++L EM +RG++ N  T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I G C +   + A  L  +M  SG  PD V  N LL+G C   ++ +AL + ++ +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 266 K-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y  M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL +  ++ +A ++   M  +   P+   +N LI G+C  G +D    L  E+ +R  
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           + +   +  LI G  + G ++ A  +F +M  +G +P       ++ G     ELE+A  
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVA 670

Query: 435 LFYKMEI 441
           +   +++
Sbjct: 671 MLEDLQM 677



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L K +  D   Q    + S + S     F  LI+GY K G  +  LE F +M  
Sbjct: 548 SSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGR 607

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                D  IY   L   FRK   +  AL ++ EM+     P+ +T   ++ G     + E
Sbjct: 608 RGIVADAIIY-ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666

Query: 186 VAIKMLDEM 194
            A+ ML+++
Sbjct: 667 RAVAMLEDL 675


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 191/677 (28%), Positives = 318/677 (46%), Gaps = 56/677 (8%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  LI G+ K G+ E+AL    +M     + +V  YNA++    +      A++++ EM
Sbjct: 348  TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     P+  T++LLI+G  KS     A ++L EM  R + P+ FTY+++ISGLC  +  
Sbjct: 408  LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             +A  +  +M  +G  P+   Y  L+  + +  R + A+ LL+    +G +P L  Y+CL
Sbjct: 468  QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I GL RAK+ +EA      M E+ I+P+   YG  I   S++G+++ A +   DM   GI
Sbjct: 528  IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            VP+   Y  LIKG CD+G   +A S    + ++  +P+   ++ +I  + +NG   +A  
Sbjct: 588  VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
            +F K  K G  P V ++N+LI G CK G++EKA+ L+ +M   G NP + +         
Sbjct: 648  VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV--------- 698

Query: 459  HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                   T++   C  G + KA ++  ++ E   +PD++TY+++I+G+CK GN+  A KL
Sbjct: 699  -----YNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753

Query: 519  FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            F E+  KG+ PD   Y  LI+G  +    E A  +F +  Q     S + + SL+   C+
Sbjct: 754  FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCK 812

Query: 579  RRKFSLAFSLW--------------LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
              K   A  L+                 L D  G+  E M+  E+     E  N I   L
Sbjct: 813  HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK-AEMMEEAEQLFLDMETRNIIPNTL 871

Query: 625  EMDFKL-------NDFQL----------------APYTIWLIGLCQDGQVKEALNIFSVL 661
                 L       N F++                  Y +     C++G+  EAL + +  
Sbjct: 872  TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 662  VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            +     +       LI  LCK   +   +++     K    L  + CN LL  L F K  
Sbjct: 932  LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL--LGFYKSG 989

Query: 722  KKVHAYHLLCRMKSVGY 738
             +  A  +L  M+ +G+
Sbjct: 990  NEDEASKVLGVMQRLGW 1006



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 172/645 (26%), Positives = 292/645 (45%), Gaps = 62/645 (9%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQ 130
           LLK N   L+W+    +      +V DV+    +I  + KVGD  K      +M E +C+
Sbjct: 217 LLKANMMGLFWKVYGSMVEA--KIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECK 273

Query: 131 PDVYIYNAVLN-----------IAFRKQLFLLALA------------------------V 155
           P+++ YNA +            +  +K +    L                         +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +  M      PN  T++ LI+G  K G  E A+++ DEM  RG+  N  TY  +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                +A  LF +M  +G  PD   YN L++G+ K   + +A  LL   +     P   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS LI GL  +    +A     +M    ++P+V +YG +I+   +  + + A++LL  M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G++PD +CYN LI G C    +++A+ L V++ ++   PN HT+   I    ++G + 
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLF 448
            A++ F  M  +G  P+  ++  LI G C  G   +A   F  M       +I     + 
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII 633

Query: 449 LRLSQGGNR---------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
             LS+ G                 V D     +++  +C  G I KA ++  ++  +G  
Sbjct: 634 HSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGIN 693

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+I+ YN+LING CK+G +  A +LF E++ K L PD VTY T+I+G  +     +AF++
Sbjct: 694 PNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKL 753

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F +M   G +P   +Y  L+    +      A SL+ +  +   G        I+ F + 
Sbjct: 754 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKH 813

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           G+V  A +   +M  K     +  YTI +    +   ++EA  +F
Sbjct: 814 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/625 (25%), Positives = 291/625 (46%), Gaps = 48/625 (7%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I   LK +      + L E+++  ++     + VLISG     D +KA E   +M    
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+V++Y  ++    ++  + +A+ +   M+    LP++  ++ LI GL ++ K E A 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L +M ++GI PN  TY   I+   +      A R F  M  SG  P+ V Y  L+ G 
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C +    EAL+  +   + G +P + +YS +I  L +  +  EA   + K  +  + PDV
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            LY  +I G  + G ++ A +L  +M   GI P+   YN LI G C LG + +AR L  E
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDE 721

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I ++D +P+  T++ +I G C++G + +A KLF++M   G  P   ++  LIDG  K G 
Sbjct: 722 IEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 781

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           LEKA  LF++ +                 V   ++  ++++ +C  G + +A ++   + 
Sbjct: 782 LEKALSLFHEAQ--------------QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           +    P+I+TY  LI+ + K   +  A +LF +++ + + P+++TY +L+    ++    
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 887

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
               +F  M   G       Y  + +  C+                   G+  E++K + 
Sbjct: 888 KMISLFKDMEARGIACDAIAYGVMASAYCKE------------------GKSLEALKLLN 929

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           + L +G              KL D     +   +  LC++ Q+   L + S + + +  +
Sbjct: 930 KSLVEG-------------IKLED---DVFDALIFHLCKEKQISTVLELLSEMGKEELSL 973

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVF 693
           +  +C  L+ G  K G  D A  V 
Sbjct: 974 SSKTCNTLLLGFYKSGNEDEASKVL 998



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 176/683 (25%), Positives = 310/683 (45%), Gaps = 62/683 (9%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           +G M E    PDVY Y  V+    +    +    V  EM K  C PN+ T++  I GL +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQ 288

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G  + A+++   M ++G+ P+  TYT+++ G C+  R+ EA  +F  M  SG +P+   
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y AL++GF K   ++EAL +       G    + +Y+ +I G+ +A    +A + + +M 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              +EPD   Y ++I G  ++  +  A +LL++M+ R + P  + Y+ LI G C    L 
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 361 QAR-------------------------------SLQVEIWK----RDSLPNTHTFTILI 385
           +A                                 + +E+ K       LP+   +  LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIG 442
            G+CR   V++A+ L   M + G  P+   + A I+   K+GE++ A   F  M    I 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 443 KNPTLFLRLSQG----GNRVHDKASLQTMVEQ------YCTAGLIH---------KAYKI 483
            N  ++  L +G    GN V   ++ + M+E+         + +IH         +A  +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
            ++  ++G +PD+  YNSLI+GFCK G+I  A +L+ E+   G+ P+ V Y TLINGL +
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDE 602
           +     A  +F ++ +    P    Y +++   C+    + AF L+ + + + IS     
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
               I+   ++G +E A+    E   K +   L+ +   +   C+ G+V EA  +F  +V
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           + K      +   LI    K   ++ A  +FL       I  P    Y    L +++   
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII--PNTLTYTSLLLSYNQIGN 885

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
           +     L   M++ G   DA  Y
Sbjct: 886 RFKMISLFKDMEARGIACDAIAY 908



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 256/533 (48%), Gaps = 16/533 (3%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           RK   S  + S +IS L   +      + LD++    V     ++  LI  Y +    E 
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+E    M      PD++ YN ++    R +    A  +  +M +    PN  T+   IN
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
             SKSG+ +VA +   +M   GI+PN   YTI+I G C +    EA   F  M + G  P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  AY+A+++   K  +  EA+ +   F K G VP +  Y+ LI G  +    ++A   Y
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M    I P++V+Y  +I GL + G+V  A +L  ++ E+ +VPD   Y+ +I G+C  
Sbjct: 685 DEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKS 744

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L +A  L  E+  +   P+ + + ILI G  + G ++ A  LF++ ++     S+  F
Sbjct: 745 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAF 803

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N+LID  CK G++ +A  LF  M   K  P +               +   +++ Y  A 
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNI--------------VTYTILIDAYGKAE 849

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           ++ +A ++ + +     +P+ +TY SL+  + ++GN    + LFK+++ +G+  D++ YG
Sbjct: 850 MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            + +   +  +  +A ++  +    G      V+ +L+   C+ ++ S    L
Sbjct: 910 VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLEL 962



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 267/619 (43%), Gaps = 56/619 (9%)

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           Y+   K++    + ++S+L   L  SG    A  ML+++ Q    P +   ++V      
Sbjct: 108 YWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLV------ 161

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                  YR F          +   ++  ++ F  L  ++EA ++  +   +GF P L  
Sbjct: 162 -----RCYREF-------GGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLIC 209

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + L+  L +A      +  Y  M E KI PDV  Y  +I+   + G V     +LS+M 
Sbjct: 210 CNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM- 268

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E+   P+ + YNA I G C  G +D+A  ++  + ++   P+ HT+T+L+ G C+     
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA--------------NLLFYKMEI 441
           +A+ +F  M  +G  P+   + ALIDG  K G +E+A              N++ Y   I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388

Query: 442 G---------KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           G         K  +LF  +   G    D  +   +++ Y  +  + KA ++L ++     
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLE-PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P   TY+ LI+G C   ++  A ++  ++   G++P+   YGTLI    +  R E A  
Sbjct: 448 TPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFL 611
           +   M  NG  P    Y  L+   CR +K   A  L +    + I          I  + 
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567

Query: 612 QKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           + GE++ A    + +L      N+     YTI + G C  G   EAL+ F  ++E   I 
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNN---VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHA 726
              +   +IH L K G    AM VFL  LK G +  P V  +L  SL+  F K+     A
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV--PDV--FLYNSLISGFCKEGDIEKA 680

Query: 727 YHLLCRMKSVGYDLDACLY 745
             L   M   G + +  +Y
Sbjct: 681 SQLYDEMLHNGINPNIVVY 699



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 161/354 (45%), Gaps = 38/354 (10%)

Query: 96   VVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            VV DVF    LISG+ K GD EKA + + +M      P++ +YN ++N   +      A 
Sbjct: 657  VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 154  AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             ++ E+ + + +P++VT+S +I+G  KSG    A K+ DEM  +GI P+ + Y I+I G 
Sbjct: 717  ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 214  CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             +    ++A  LF + +         A+N+L++ FCK  +V EA  L          P +
Sbjct: 777  GKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP--------------------------- 306
             +Y+ LID   +A+  +EA   +  M    I P                           
Sbjct: 836  VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895

Query: 307  --------DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
                    D + YGVM     + GK  +A+KLL+     GI  +   ++ALI   C    
Sbjct: 896  MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQ 955

Query: 359  LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            +     L  E+ K +   ++ T   L+ G  ++G  D+A K+   M++ G  P+
Sbjct: 956  ISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 1009



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 1/277 (0%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            S +I    K       ++  DE+ S  +S    ++ +LI G  K G+ EKAL  F + ++
Sbjct: 735  STIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                  +  +N++++   +    + A  ++ +MV     PNIVT+++LI+   K+   E 
Sbjct: 795  -KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++  +M  R I+PN  TYT ++    QI    +   LF  M+  G + D +AY  + +
Sbjct: 854  AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             +CK  +  EAL LL     +G       +  LI  L + K+         +M +E++  
Sbjct: 914  AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSL 973

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                   ++ G  ++G   +A K+L  M+  G VP +
Sbjct: 974  SSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 1010


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 296/611 (48%), Gaps = 32/611 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG Y++   E A++ F  M      P V  +N ++    R +   L +++Y +M +  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +I +F++LI       K   A+    ++T+ G+ P+  T+T ++ GLC  +R  EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF ++    C PD + +  L+NG C+  RV EA+ALL    ++G  P   +Y   +DG+
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +      A    RKM E   I+P+VV+Y  +I GL + G+  D+  L  +M+++GI P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +I GFC  G    A+ L  E+ +R   PN  T+  LI    + G   +A +L++
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +N++IDG CK   L+ A  +FY M   G +P +F             
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF------------- 394

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ YC A  I    ++L ++   G + + +TYN+LI+GFC VG++N AL L ++
Sbjct: 395 -TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYK 570
           +   G+ PD VT  TL++GL    + +DA  +F  M           P NG  P    Y 
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513

Query: 571 SLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            L+       KF  A  L+ +   R I          I+   ++  ++ A Q  + M  K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  +   + G C+ G+V + L +F  +     +      + LI+G  K G ++ A
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGA 633

Query: 690 MDVFLYTLKNG 700
           +D+F   + +G
Sbjct: 634 LDIFQEMISSG 644



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 275/574 (47%), Gaps = 63/574 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    PDV  +  +L+          AL +++++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P+++TF+ L+NGL + G+   A+ +LD M + G+ P++ TY   + G+C++    
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++G CK  R  ++  L    +  G  P + +Y+C+
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   + R+  A    ++M E KI P+VV Y  +I    + GK  +A +L  +M  RGI
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+T  YN++I GFC    LD A  +   +  +   P+  TFT LI G C    +DD  +
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L ++M + G   +   +N LI G C  G+L  A  L  +M           +S G     
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM-----------ISSG--VCP 461

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES-----------GNLPDIITYNSLINGFCK 508
           D  +  T+++  C  G +  A ++   + +S           G  PD++TYN LI G   
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A +L++E+  +G+ PD++TY ++I+GL +  R ++A ++F  M     +P+   
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           + +L+   C+                  +GR D+ ++   E  ++G V +AI        
Sbjct: 582 FNTLINGYCK------------------AGRVDDGLELFCEMGRRGIVADAI-------- 615

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                    Y   + G  + G +  AL+IF  ++
Sbjct: 616 --------IYITLIYGFRKVGNINGALDIFQEMI 641



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 244/491 (49%), Gaps = 27/491 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QPD   Y   ++   +    + AL +  +M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 160 VKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +++ + PN+V +S +I+GL K G+   +  +  EM  +GI PN  TY  +I G C   R
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A RL  +M +   SP+ V YNAL+N F K  +  EA  L       G +P   +Y+ 
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +  M  +   PDV  +  +I G   A ++ D M+LL +M  RG
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V +T  YN LI GFC +G L+ A  L  ++      P+  T   L+ G+C NG + DA 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM-----PHR 538

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++ + +      P+++T+N+LING+C
Sbjct: 539 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  D++ Y TLI G ++V     A  IF +M  +G  P   
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650

Query: 568 VYKSLMT--WS 576
             ++++T  WS
Sbjct: 651 TIRNMLTGFWS 661



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 226/464 (48%), Gaps = 27/464 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +   + G  K+GD   AL    KM+E    +P+V IY+A+++   +      +  ++ E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PNIVT++ +I G   SG+   A ++L EM +R I PN  TY  +I+   +  +
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  L+ +M   G  P+ + YN++++GFCK  R+D A  +       G  P + +++ 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG   AKR D+      +M    +  + V Y  +I G    G +  A+ L   M   G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 339 IVPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSL-------PNTHTFTILICG 387
           + PD    N L+ G CD G L  A    +++Q      D+        P+  T+ ILICG
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPT 446
           +   G   +A++L+ +M   G  P    ++++IDGLCK   L++A  +F  M     +P 
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T++  YC AG +    ++  ++   G + D I Y +LI GF
Sbjct: 579 V--------------VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGF 624

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            KVGNINGAL +F+E+   G+ PD++T   ++ G    +  E A
Sbjct: 625 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 213/437 (48%), Gaps = 28/437 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I G  K G    +   F +M++    P++  YN ++        +  A  +  EM
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    PN+VT++ LIN   K GK   A ++ DEM  RGI+PN  TY  +I G C+ +R 
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  +F  M   GCSPD   +  L++G+C  +R+D+ + LL    + G V    +Y+ L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--- 336
           I G       + A    ++M    + PD+V    ++ GL + GK+KDA+++   M++   
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 337 --------RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                    G+ PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G+
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   +D+A ++F  M      P+V  FN LI+G CKAG ++    LF +M         
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM--------- 605

Query: 449 LRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                 G R  V D     T++  +   G I+ A  I  ++  SG  PD IT  +++ GF
Sbjct: 606 ------GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659

Query: 507 CKVGNINGALKLFKELQ 523
                +  A+ + ++LQ
Sbjct: 660 WSKEELERAVAMLEDLQ 676



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 11/358 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+    +S     +  LI+ + K G   +A E + +M      P+   YN++++   +
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  ++Y M    C P++ TF+ LI+G   + + +  +++L EM +RG++ N  T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I G C +   + A  L  +M  SG  PD V  N LL+G C   ++ +AL + ++ +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 266 K-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           K           +G  P + +Y+ LI GL    ++ EA   Y +M    I PD + Y  M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL +  ++ +A ++   M  +   P+   +N LI G+C  G +D    L  E+ +R  
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGI 610

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           + +   +  LI G  + G ++ A  +F +M  +G +P       ++ G     ELE+A
Sbjct: 611 VADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 103 VLISGYYKVGDCEKALESFGKMK----EFDC-------QPDVYIYNAVLNIAFRKQLFLL 151
            L+ G    G  + ALE F  M+    + D        +PDV  YN ++     +  FL 
Sbjct: 468 TLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLE 527

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +Y EM     +P+ +T+S +I+GL K  + + A +M   M  +   PN  T+  +I+
Sbjct: 528 AEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 587

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C+  R D+   LF +M   G   D + Y  L+ GF K+  ++ AL + +     G  P
Sbjct: 588 GYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
              +   ++ G +  +  + A A    +   ++E +
Sbjct: 648 DTITIRNMLTGFWSKEELERAVAMLEDLQRYQLEDE 683


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 258/522 (49%), Gaps = 55/522 (10%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESF-GKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +RS + SV    + +++    + G+  +ALE F G+M      P +  YN ++N   +  
Sbjct: 38  VRSSSRSVAD--YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 95

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                + ++ E+VK    P++VT++ LI+ L K+G  E A ++   M+ RG +PN  TY+
Sbjct: 96  ELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYS 155

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCS--PDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           ++I+GLC++ R DEA  L  +M    C   P+ + YN+ L+G CK     EA  L+RS  
Sbjct: 156 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 215

Query: 266 -----------------------------------KDGFVPRLGSYSCLIDGLFRAKRYD 290
                                                G+VP + +Y+ L++GL +A + +
Sbjct: 216 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKME 275

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A+A    M ++ + PDV+ Y V++    +A +V +A++LL  M  RG  P+   +N++I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G C      +A  + ++++ R  +P+  TF ILI G C+ G  + A  LF +M      
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQ 395

Query: 411 PSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P V  F ALIDGLCKAG++E A ++L     +G  P +               +   +V 
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV--------------TYNVLVH 441

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C +G I +  + L ++  SG +P+ +TY SL+   C+    + AL+L  +L+  G  P
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           D+VTY  L++GL +  + E A  +  +M   G  P    + +
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 29/537 (5%)

Query: 136 YNAVLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           YN VL    R      AL ++  EM +    P IVT++ +INGL KS +    +++ +E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            +RG  P+  TY  +I  LC+    +EA RL   M   GC P+ V Y+ L+NG CK+ R+
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 255 DEALALLRSFEKDG--FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE--KIEPDVVL 310
           DEA  L++   +     +P + +Y+  +DGL +     EA    R + +   ++ PD V 
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           +  +I GL + G+  +A     DM   G VP+   YNAL+ G C    +++A ++   + 
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK---AG 427
            +   P+  T+++L+   C+   VD+A +L + M   GC P+V  FN++IDGLCK   +G
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           E  +  L  Y   +                V DK +   ++   C AG   +A  +  ++
Sbjct: 346 EAFQIALQVYNRML----------------VPDKVTFNILIAGACKAGNFEQASALFEEM 389

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                 PD++T+ +LI+G CK G +  A  +   +   G+ P+ VTY  L++GL +  R 
Sbjct: 390 VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           E+      +M  +GC P    Y SL+   CR  +   A  L +  L+      D    +I
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL-VSKLKSFGWDPDTVTYNI 508

Query: 608 --EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
             +   + G+ E AI  L EM  K +      +     GL + G +   + +  V++
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVL 565



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 235/497 (47%), Gaps = 28/497 (5%)

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYR-KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           +  Y+ ++  L RA     A   +R +M  + + P +V Y  +I GL ++ ++   M+L 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            ++ +RG  PD   YN LI   C  G L++AR L   +  R  +PN  T+++LI G+C+ 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 392 GMVDDAQKLFNKMEKAGC--FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           G +D+A++L  +M +  C   P++  +N+ +DGLCK     +A  L   +  G      L
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS-----L 219

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R+S       D  +  T+++  C  G   +A      +   G +P+++TYN+L+NG CK 
Sbjct: 220 RVSP------DTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGLCKA 271

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             +  A  + + +  KG+ PD +TY  L++   +  R ++A  +   M   GCTP+   +
Sbjct: 272 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 331

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
            S++   C+  +   AF + LQ    +   D  +    I    + G  E A     EM  
Sbjct: 332 NSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGY 685
           K     +  +   + GLC+ GQV+ A +I  ++     +  PP+ V    L+HGLCK G 
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLM---GNLGVPPNVVTYNVLVHGLCKSGR 448

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++   +     + +G +  P    Y        + ++   A  L+ ++KS G+D D   Y
Sbjct: 449 IEEPCEFLEEMVSSGCV--PESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTY 506

Query: 746 PKTKSLLPGPWNTREME 762
                L+ G W + + E
Sbjct: 507 ---NILVDGLWKSGKTE 520



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 248/559 (44%), Gaps = 86/559 (15%)

Query: 19  EPALEPLLP-FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           E A + + P  ++  T+ + + K+     G   F    KR       + + +I  L K  
Sbjct: 71  EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYI 135
             +   +    + S         + VLI+G  KVG  ++A E   +M  K  D  P++  
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190

Query: 136 YNAVLNIAFRKQLFLLAL-----------------------------------AVYYEMV 160
           YN+ L+   ++ +   A                                    A   +M+
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMI 250

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN+VT++ L+NGL K+ K E A  M++ M  +G+ P+  TY++++   C+ +R D
Sbjct: 251 AGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 310

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L   M   GC+P+ V +N++++G CK  R  EA  +         VP   +++ LI
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILI 370

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  +A  +++A A + +M  + ++PDV+ +G +I GL +AG+V+ A  +L  M   G+ 
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 430

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YN L+ G C  G +++      E+     +P + T+  L+  +CR    DDA +L
Sbjct: 431 PNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            +K++  G  P    +N L+DGL K+G+ E+A  +  +M +GK                 
Sbjct: 491 VSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM-VGK----------------- 532

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                                         G+ PD  T+ +   G  + GN+ G ++L +
Sbjct: 533 ------------------------------GHQPDSFTFAACFGGLHRSGNLAGTMELLR 562

Query: 521 ELQLKGLRPDSVTYGTLIN 539
            +  KG+ PD+ T  ++++
Sbjct: 563 VVLAKGMLPDATTCSSILD 581



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 239/512 (46%), Gaps = 31/512 (6%)

Query: 241 YNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           YN +L   C+      AL + R    +DG  P + +Y+ +I+GL ++         + ++
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +    PDVV Y  +I  L +AG +++A +L   M  RG VP+   Y+ LI G C +G +
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 360 DQARSLQVEIWKR--DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG--CFPSVGM 415
           D+AR L  E+ ++  D LPN  T+   + G+C+  M  +A +L   +        P    
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           F+ LIDGLCK G+ ++A           N  +       G  V +  +   +V   C A 
Sbjct: 228 FSTLIDGLCKCGQTDEAC----------NDDMI-----AGGYVPNVVTYNALVNGLCKAD 272

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A+ ++  + + G  PD+ITY+ L++ FCK   ++ AL+L   +  +G  P+ VT+ 
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           ++I+GL + DR  +AF+I  Q+      P    +  L+  +C+   F  A +L+ + +  
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392

Query: 596 ISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQ 650
               D  +  + I+   + G+VE A + +L++   + +  + P    Y + + GLC+ G+
Sbjct: 393 NMQPDVMTFGALIDGLCKAGQVE-AARDILDL---MGNLGVPPNVVTYNVLVHGLCKSGR 448

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           ++E       +V    +    +   L++ LC+    D A+   L +    F   P    Y
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ--LVSKLKSFGWDPDTVTY 506

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +      K  K   A  +L  M   G+  D+
Sbjct: 507 NILVDGLWKSGKTEQAITVLEEMVGKGHQPDS 538


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 291/597 (48%), Gaps = 27/597 (4%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++ M   P    L+ Q    L+S  +S     F +LI+ Y+       A      + + 
Sbjct: 64  AIVRMGHYPTAISLFTQ----LQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKS 119

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             QP++  +N ++N      +   AL     ++    L +  T+  LINGLSK+G+ + A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + +L EM +  + PN   Y+ +I GLC+     +A  L  ++ + G   D V YN+L++G
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDG 239

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C + R  E   LL    ++   P   +++ LID L +  R  EA      M +   +PD
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  ++ G      V +A +L + M +RG+ PD   YN LI G+C   ++D+A  L  
Sbjct: 300 IVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  ++ +P   ++  LI G+C +G +   +KL ++M  +   P V  +N LID LCK G
Sbjct: 360 ELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEG 419

Query: 428 E-LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             LE   +L   M+ G  P +               +   M++ YC    ++ A  I  +
Sbjct: 420 RILEALGVLVMMMKKGVKPNI--------------VTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + +SG  PDI+ YN LING+CK   ++ A+ LFKE++ K L PD  +Y +LI+GL  + R
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
                 +  +M  +G +P    Y  L+   C+ + F  A SL+ Q +  I   D  +  +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI-WPDFYTNHA 584

Query: 607 IEEFLQKGE----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           I + L KGE     E+A++ LL      N   +  YTI +  LC+DG   EA+ + S
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPN---VQTYTILINALCKDGSFGEAMLLLS 638



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 243/516 (47%), Gaps = 47/516 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G  K G  + AL    +M++   QP++ +Y+A+++   +      AL +  ++
Sbjct: 162 TYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQI 221

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   L + VT++ LI+G    G+ +   ++L +M +  + P+ +T+ I+I  LC+  R 
Sbjct: 222 GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRI 281

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +   M   G  PD V YNAL+ G+C    V EA  L     K G  P + +Y+ L
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVL 341

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  + K  DEA   ++++  + + P +  Y  +I GL  +G++    KLL +M     
Sbjct: 342 IDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C  G + +A  + V + K+   PN  T+  ++ G C    V+ A+ 
Sbjct: 402 PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +FN+M K+G  P +  +N LI+G CK   +++A +LF +M             +  N + 
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-------------RHKNLIP 508

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D AS  ++++  C  G I    ++L ++ +SG  PD+ITYN L++ FCK    + A+ LF
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568

Query: 520 ----------------------------------KELQLKGLRPDSVTYGTLINGLQRVD 545
                                             K L + G  P+  TY  LIN L +  
Sbjct: 569 RQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
              +A  +  +M  N   P    ++ ++    +R +
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 260/548 (47%), Gaps = 24/548 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+  +  MV++   P    F  L+  + + G    AI +  ++  +GI P+  T+TI+I+
Sbjct: 39  AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                +    A+ L   +  SG  P+ V +N ++NGFC    + +AL   ++    G++ 
Sbjct: 99  CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y  LI+GL +  +   A    ++M +  ++P++V+Y  +I GL + G V DA+ L 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S + ERGI+ D   YN+LI G C +G   +   L  ++ + +  P+ +TF ILI  +C+ 
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G + +AQ +   M K G  P +  +NAL++G C    + +A  LF +M + G  P     
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP----- 333

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   +++ YC   ++ +A  +  +L     +P I +YNSLI+G C  G
Sbjct: 334 ---------DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+   KL  E+      PD VTY  LI+ L +  R  +A  +   M + G  P+   Y 
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYN 444

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMD 627
           ++M   C R   ++A  ++ + ++  SG + + +     I  + +   V+ AI    EM 
Sbjct: 445 AMMDGYCLRNNVNVAKDIFNRMVK--SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGY 685
            K     +A Y   + GLC  G++     +   +  C +  +P       L+   CK   
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM--CDSGQSPDVITYNILLDAFCKTQP 560

Query: 686 LDLAMDVF 693
            D A+ +F
Sbjct: 561 FDKAISLF 568



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 225/498 (45%), Gaps = 56/498 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+   +V     ++  LI G  K G    AL    ++ E     D   YN++++    
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     +  +MV+ N  P+  TF++LI+ L K G+   A  +L  M++RG  P+  T
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++ G C      EA  LF +M   G  PD + YN L++G+CK + VDEA+ L +   
Sbjct: 303 YNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               VP + SY+ LIDGL  + R         +M      PDVV Y ++I  L + G++ 
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ +L  M ++G+ P+   YNA++ G+C    ++ A+ +   + K    P+   + +LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G C+  MVD+A  LF +M      P +  +N+LIDGLC  G +     L  +M + G++
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 445 P----------------------TLFLRLSQG-------GNRVHDK-------------- 461
           P                      +LF ++ +G        + + D               
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602

Query: 462 ---------ASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     ++QT   ++   C  G   +A  +L ++ ++   PD IT+  +I    + 
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662

Query: 510 GNINGALKLFKELQLKGL 527
              + A KL +E+  +GL
Sbjct: 663 NETDKAEKLREEMIARGL 680



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 218/497 (43%), Gaps = 49/497 (9%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+    D+A   F +M      P    ++ LL    ++     A++L    +  G  P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++ LI+  F       A++    + +   +P++V +  +I G    G +  A+    +
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +  +G + D + Y  LI G    G +  A  L  E+ K    PN   ++ LI G+C++G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           V DA  L +++ + G       +N+LIDG C  G  ++   L  KM         +R   
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM---------VR--- 258

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   D  +   +++  C  G I +A  +L  +++ G  PDI+TYN+L+ G+C   N++
Sbjct: 259 -ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +LF  +  +GL PD + Y  LI+G  +    ++A  +F ++      P+ A Y SL+
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C                   SGR     K ++E     +  + +             
Sbjct: 378 DGLCN------------------SGRISHVKKLLDEMHGSAQPPDVVT------------ 407

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
               Y I +  LC++G++ EAL +  ++++        +   ++ G C R  +++A D+F
Sbjct: 408 ----YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 694 LYTLKNGFILRPRVCNY 710
              +K+G  L P + NY
Sbjct: 464 NRMVKSG--LEPDILNY 478



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 121/241 (50%), Gaps = 1/241 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ GY    +   A + F +M +   +PD+  YN ++N   + ++   A+ ++ EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              N +P+I +++ LI+GL   G+     ++LDEM   G  P+  TY I++   C+    
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  LF ++ + G  PDF   +A+++  CK  ++  A   L+     G  P + +Y+ L
Sbjct: 562 DKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L +   + EA     KM +    PD + + ++I  L +  +   A KL  +M  RG+
Sbjct: 621 INALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680

Query: 340 V 340
           V
Sbjct: 681 V 681



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 1/183 (0%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R  N+      +  LI G   +G      E   +M +    PDV  YN +L+   + Q
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            F  A++++ ++V+    P+  T   +++ L K  K ++A   L  +   G  PN  TYT
Sbjct: 560 PFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I+ LC+     EA  L  KM+D+   PD + +  ++    +    D+A  L       
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIAR 678

Query: 268 GFV 270
           G V
Sbjct: 679 GLV 681



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 3/216 (1%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           ++  LEP    L+   + +   KT+        F     +  +   AS +++I  L    
Sbjct: 467 VKSGLEP--DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLG 524

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + LDE+     S     + +L+  + K    +KA+  F ++ E    PD Y  +
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNH 583

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           A+++   + +   +A      ++   C PN+ T+++LIN L K G    A+ +L +M   
Sbjct: 584 AIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDN 643

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
              P+  T+ I+I  L Q N  D+A +L  +M   G
Sbjct: 644 DRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 171/630 (27%), Positives = 297/630 (47%), Gaps = 44/630 (6%)

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
           P+G  ++    D     N S  S VF +++  Y  +   ++A+ +    K     P V  
Sbjct: 122 PSGSSIFQCLKDSYHVYNSS--SAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLS 179

Query: 136 YNAVLNIAFRKQ--LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
           YN+VL+   R +  + L A  VY EM++    PN+ T+++LI G    G+ +  +    E
Sbjct: 180 YNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE 239

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M + G LPN  TY  +I   C++ R DEA+ L   M   G  P+ ++YN ++NG C+   
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + EA  +L      GF P   +Y+ L++G  +   + +A   + +M    + P VV Y  
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I  + +A  +  AM+    MR RG+ P+   Y  LI GF   GLL++A  +  E+ +  
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  T+   I G C    +++A  +  +M + G  P V  ++ +I G C+ GEL++A 
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +  +M E G +P              D  +  ++++  C    + +A  +  ++ + G 
Sbjct: 480 QMKQEMVEKGVSP--------------DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD  TY +LIN +C  G++N AL L  E+  KG  PD+VTY  LINGL +  R  +A R
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +  ++      PS   Y +L+  +C   +F    +L                  I+ F  
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIE-NCSNIEFKSVVAL------------------IKGFCM 626

Query: 613 KG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           KG   E +   + ++E + K  +   A Y + + G C+ G + +A N++  ++    +  
Sbjct: 627 KGLMHEADRVFESMVERNHKPGE---AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPH 683

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + + LI  L K G  +   +V   TL++
Sbjct: 684 TVTVITLIKALFKEGMNEEMSEVIGDTLRS 713



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 270/576 (46%), Gaps = 39/576 (6%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN-----RADEAYRL 225
           F L++   S     + A+  ++     G +P   +Y  V+  + +        A+E YR 
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR- 203

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M  S  SP+   YN L+ GFC +  + + L      E++G +P + +Y+ LID   +
Sbjct: 204 --EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R DEA+   + M  + ++P+++ Y V+I GL   G +K+A ++L +M  +G  PD   
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+ G+C  G   QA  +  E+ +    P+  T+T LI  MC+   ++ A + F++M 
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
             G  P+   +  LIDG  + G L +A  +  +M E G +P++               + 
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV--------------VTY 427

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
              +  +C    + +A  ++ ++ E G  PD+++Y+++I+GFC+ G ++ A ++ +E+  
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG+ PD+VTY +LI GL  + R  +A  +  +M   G  P    Y +L+   C     + 
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547

Query: 585 AFSLWLQYLRD------------ISGRDDES-MKSIEEFLQKGEVENAIQGLLEMDFKL- 630
           A  L  + +              I+G + ++  +  +  L K   E ++   +  D  + 
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607

Query: 631 --NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
             ++ +       + G C  G + EA  +F  +VE            +IHG C+ G L  
Sbjct: 608 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 667

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           A +++   + +GF+        L+++L     N+++
Sbjct: 668 AFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 703



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 219/482 (45%), Gaps = 28/482 (5%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I+ L +       W+ L+E+     +     +  L++GY K G+  +AL    +M
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 P V  Y A++N   + +    A+  + +M      PN  T++ LI+G S+ G  
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++L+EMT+ G  P+  TY   I G C + R +EA  +  +M + G +PD V+Y+ +
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++GFC+   +D A  + +   + G  P   +YS LI GL   +R  EA    ++M +  +
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 525

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD   Y  +I      G +  A+ L  +M  +G +PD   Y+ LI G        +A+ 
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 585

Query: 365 LQVEIWKRDSLPNTHTFTILI--C-------------GMCRNGMVDDAQKLFNKMEKAGC 409
           L  ++   +S+P+  T+  LI  C             G C  G++ +A ++F  M +   
Sbjct: 586 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 645

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P   ++N +I G C+ G L KA  L+ +M           +  G   V    ++ T+++
Sbjct: 646 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEM-----------IHSG--FVPHTVTVITLIK 692

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G+  +  +++     S  L +      L+    K GN+   L +  ++   GL P
Sbjct: 693 ALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLP 752

Query: 530 DS 531
           +S
Sbjct: 753 NS 754



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 199/434 (45%), Gaps = 33/434 (7%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +A+I+ + K    +   +  D++R   +      +  LI G+ + G   +A    
Sbjct: 353 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M E    P V  YNA ++     +    AL V  EMV+    P++V++S +I+G  + 
Sbjct: 413 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 472

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A +M  EM ++G+ P+  TY+ +I GLC++ R  EA  L  +M D G  PD   Y
Sbjct: 473 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 532

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             L+N +C    +++AL L       GF+P   +YS LI+GL +  R  EA     K+  
Sbjct: 533 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 592

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           E+  P  V Y  +I                S++  + +V       ALIKGFC  GL+ +
Sbjct: 593 EESVPSDVTYDTLIEN-------------CSNIEFKSVV-------ALIKGFCMKGLMHE 632

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +   + +R+  P    + ++I G CR G +  A  L+ +M  +G  P       LI 
Sbjct: 633 ADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 692

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L K G  E+ + +     IG      LR      R+++    + +VE     G +    
Sbjct: 693 ALFKEGMNEEMSEV-----IGDT----LR----SCRLNEAELAKVLVEINHKEGNMEAVL 739

Query: 482 KILMQLAESGNLPD 495
            +L  +A+ G LP+
Sbjct: 740 NVLTDMAKDGLLPN 753


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 188/675 (27%), Positives = 309/675 (45%), Gaps = 52/675 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESF------------------GKMKEFDCQPDVYIYNAVLN 141
           VF +LI  Y ++G  ++A   F                    M E    P+ Y Y  +  
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITA 217

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              R +    A   + EM K    P+    S LI+G  + G  +  +++ D M   GI  
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N  TY ++I GLC+  + ++A  +   M   GC P+   +  L+ G+C+   +  AL LL
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
              EK   VP   SY  +I+GL   K    A     KM    ++P+VV+Y  +I G +  
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G++++A +LL  M   G+ PD +CYNA+I      G +++A +  +EI  R   P+  TF
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME- 440
              I G  + G + +A K F++M   G  P+  ++  LI+G  KAG L +A  +F  +  
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 441 IGKNP----------------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +G  P                       +F  L + G  V D  +  +++  +C  G + 
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG-LVPDVFTYSSLISGFCKQGEVE 576

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KA+++  ++   G  P+I  YN+L++G CK G+I  A KLF  +  KGL PDSVTY T+I
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +G  + +   +AF +F +MP  G  P   VY +L+   C+      A +L+ + L+    
Sbjct: 637 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEA 654
                   I+ + +  +++ A Q   EM  K    Q+ P    YT  +   C+ G+++EA
Sbjct: 697 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAK----QIMPDHVTYTTVIDWHCKAGKMEEA 752

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +F  + E   IV   +   L++G  K G       +F   +  G  ++P    Y L  
Sbjct: 753 NLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG--VKPDEVTYGLVI 810

Query: 715 LLFSKDNKKVHAYHL 729
               K++  V A+ L
Sbjct: 811 YAHCKEDNLVEAFKL 825



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 185/692 (26%), Positives = 330/692 (47%), Gaps = 33/692 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I   ++    D   +  D + S  + +    + VLI G  K G  EKA E    M  
Sbjct: 248 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 307

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C+P+   +  ++    R+     AL +  EM K N +P+ V++  +INGL       +
Sbjct: 308 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 367

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+L++MT  G+ PN   Y+ +I G     R +EA RL   M  SG +PD   YNA+++
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
              K  +++EA   L   +  G  P   ++   I G  +  +  EA  ++ +M +  + P
Sbjct: 428 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 487

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  LY V+I G  +AG + +A+ +   +   G++PD    +A I G    G + +A  + 
Sbjct: 488 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 547

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++  +P+  T++ LI G C+ G V+ A +L ++M   G  P++ ++NAL+DGLCK+
Sbjct: 548 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 607

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++++A  LF  M E G  P              D  +  TM++ YC +  + +A+ +  
Sbjct: 608 GDIQRARKLFDGMPEKGLEP--------------DSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  P    YN+L++G CK G++  A+ LF+E+  KG    ++++ TLI+G  +  
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 712

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + ++A ++F +M      P    Y +++ W C+  K   A  L+ +        D  +  
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 606 SI----EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           S+     +  Q  EV    + ++    K ++     Y + +   C++  + EA  +   +
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDE---VTYGLVIYAHCKEDNLVEAFKLRDEV 829

Query: 662 VECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           V  K ++T  +    LI  LCKR  L  A  +     + G       C+ L+RS  F + 
Sbjct: 830 VG-KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS--FHEA 886

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
            K   A  +   +KS+G      L P T +L+
Sbjct: 887 GKMDEATRVFEGVKSLG------LVPDTTTLI 912



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 181/663 (27%), Positives = 312/663 (47%), Gaps = 21/663 (3%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           T +E++   +    +    LI G+ + GD ++ L     M       ++  YN +++   
Sbjct: 231 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 290

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +      A  +   M+ L C PN  TF LLI G  +      A+++LDEM +R ++P+  
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 350

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           +Y  +I+GLC       A +L  KM  SG  P+ V Y+ L+ G+    R++EA  LL   
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G  P +  Y+ +I  L +A + +EA  +  ++    ++PD V +G  I G S+ GK+
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A K   +M + G++P+   Y  LI G    G L +A S+   +     LP+  T +  
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GK 443
           I G+ +NG V +A K+F+++++ G  P V  +++LI G CK GE+EKA  L  +M + G 
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P +F+                 +V+  C +G I +A K+   + E G  PD +TY+++I
Sbjct: 591 APNIFI--------------YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMI 636

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G+CK  N+  A  LF E+  KG++P S  Y  L++G  +    E A  +F +M Q G  
Sbjct: 637 DGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQG 622
            + + + +L+   C+  K   A  L+ + +      D  +  + I+   + G++E A   
Sbjct: 697 TTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLL 755

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
             EM  +        YT  + G  + GQ  E   +F  +V         +   +I+  CK
Sbjct: 756 FKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY--DL 740
              L  A  +    +  G + +  + + L+ +L   +D     A  LL  M  +G    L
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED--LTEASKLLDEMGELGLKPSL 873

Query: 741 DAC 743
            AC
Sbjct: 874 AAC 876



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 266/533 (49%), Gaps = 14/533 (2%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR  + S  S  A+I+ L       L  + L+++    +     V+  LI GY   G  E
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A      M      PD++ YNA+++   +      A     E+      P+ VTF   I
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G SK+GK   A K  DEM   G++PN   YT++I+G  +     EA  +F  +   G  
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD    +A ++G  K  RV EAL +    ++ G VP + +YS LI G  +    ++A+  
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 581

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M  + I P++ +Y  ++ GL ++G ++ A KL   M E+G+ PD+  Y+ +I G+C 
Sbjct: 582 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 641

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A SL  E+  +   P++  +  L+ G C+ G ++ A  LF +M + G F +   
Sbjct: 642 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLS 700

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           FN LIDG CK+ ++++A+ LF +M I K              + D  +  T+++ +C AG
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEM-IAKQI------------MPDHVTYTTVIDWHCKAG 747

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +  ++ E   + D +TY SL+ G+ K+G  +    LF+++  KG++PD VTYG
Sbjct: 748 KMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYG 807

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +I    + D   +AF++  ++   G      ++  L+T  C+R   + A  L
Sbjct: 808 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 860



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 179/385 (46%), Gaps = 1/385 (0%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           ++K    Q   + F    ++  +    + S++IS   K    +  ++  DE+    ++  
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
             ++  L+ G  K GD ++A + F  M E   +PD   Y+ +++   + +    A ++++
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 653

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM      P+   ++ L++G  K G  E A+ +  EM Q+G      ++  +I G C+  
Sbjct: 654 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 712

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA +LF +M      PD V Y  +++  CK  +++EA  L +  ++   +    +Y+
Sbjct: 713 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYT 772

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+ G  +  +  E +A + KM  + ++PD V YG++I    +   + +A KL  ++  +
Sbjct: 773 SLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 832

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G++     ++ LI   C    L +A  L  E+ +    P+    + L+      G +D+A
Sbjct: 833 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 892

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDG 422
            ++F  ++  G  P       L++G
Sbjct: 893 TRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 5/285 (1%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVL 140
           +    E+ S  V   S V+  L+ G  K GD EKA+  F +M  K F        +N ++
Sbjct: 649 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF---ATTLSFNTLI 705

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   +      A  ++ EM+    +P+ VT++ +I+   K+GK E A  +  EM +R ++
Sbjct: 706 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 765

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            +  TYT ++ G  ++ ++ E + LF KM   G  PD V Y  ++   CK   + EA  L
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                  G + +   +  LI  L + +   EA     +M E  ++P +     ++R   E
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           AGK+ +A ++   ++  G+VPDT     L+ G  +    + AR+L
Sbjct: 886 AGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 291/605 (48%), Gaps = 35/605 (5%)

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAV 155
            S VF +++  Y ++   +KAL      +     P V  YNAVL+   R K+    A  V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           + EM++    PN+ T+++LI G   +G  +VA+ + D+M  +G LPN  TY  +I G C+
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           + + D+ ++L   M   G  P+ ++YN ++NG C+  R+ E   +L    + G+     +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI G  +   + +A   + +M    + P V+ Y  +I  + +AG +  AM+ L  MR
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG+ P+   Y  L+ GF   G +++A  +  E+      P+  T+  LI G C  G ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA  +   M++ G  P V  ++ ++ G C++ ++++A  +  +M E G  P         
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP--------- 483

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D  +  ++++ +C      +A  +  ++   G  PD  TY +LIN +C  G++  
Sbjct: 484 -----DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL+L  E+  KG+ PD VTY  LINGL +  R  +A R+  ++      PS   Y +L+ 
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            +C   +F    SL                  I+ F  KG +  A Q    M  K +   
Sbjct: 599 -NCSNIEFKSVVSL------------------IKGFCMKGMMTEADQVFESMLGKNHKPD 639

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y I + G C+ G +++A  ++  +V+   ++   + + L+  L K G ++    V +
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699

Query: 695 YTLKN 699
           + L++
Sbjct: 700 HVLRS 704



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/573 (24%), Positives = 270/573 (47%), Gaps = 38/573 (6%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE-A 222
           C      F L++   S+    + A+ ++      G +P   +Y  V+    +  R    A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F +M +S  SP+   YN L+ GFC    +D AL L    E  G +P + +Y+ LIDG
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + ++ D+ +   R M  + +EP+++ Y V+I GL   G++K+   +L++M  RG   D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LIKG+C  G   QA  +  E+ +    P+  T+T LI  MC+ G ++ A +  +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +  L+DG  + G + +A  +  +M + G +P++              
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV-------------- 415

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++  +C  G +  A  +L  + E G  PD+++Y+++++GFC+  +++ AL++ +E
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  KG++PD++TY +LI G     R ++A  ++ +M + G  P    Y +L+   C    
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535

Query: 582 FSLAFSLW------------LQYLRDISGRDDES-MKSIEEFLQKGEVENAI------QG 622
              A  L             + Y   I+G + +S  +  +  L K   E ++        
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L+E     ++ +       + G C  G + EA  +F  ++         +   +IHG C+
Sbjct: 596 LIE---NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            G +  A  ++   +K+GF+L       L+++L
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 259/556 (46%), Gaps = 31/556 (5%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    VS     + +LI G+   G+ + AL  F KM+   C P+V  YN +++   + +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                  +   M      PN+++++++INGL + G+ +    +L EM +RG   ++ TY 
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G C+     +A  +  +M   G +P  + Y +L++  CK   ++ A+  L      
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P   +Y+ L+DG  +    +EAY   R+M +    P VV Y  +I G    GK++DA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           + +L DM+E+G+ PD   Y+ ++ GFC    +D+A  ++ E+ ++   P+T T++ LI G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
            C      +A  L+ +M + G  P    + ALI+  C  G+LEKA  L  +M E G  P 
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP- 553

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN------ 500
                        D  +   ++          +A ++L++L    ++P  +TY+      
Sbjct: 554 -------------DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 501 ---------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
                    SLI GFC  G +  A ++F+ +  K  +PD   Y  +I+G  R      A+
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            ++ +M ++G         +L+    +  K +   S+ +  LR     + E  K + E  
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEIN 720

Query: 612 QK-GEVENAIQGLLEM 626
            + G ++  +  L EM
Sbjct: 721 HREGNMDVVLDVLAEM 736



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 63/482 (13%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           GF+     A +    +  S + VI+ L +          L E+     S+    +  LI 
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           GY K G+  +AL                                    ++ EM++    P
Sbjct: 319 GYCKEGNFHQAL-----------------------------------VMHAEMLRHGLTP 343

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +++T++ LI+ + K+G    A++ LD+M  RG+ PN+ TYT ++ G  Q    +EAYR+ 
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M D+G SP  V YNAL+NG C   ++++A+A+L   ++ G  P + SYS ++ G  R+
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              DEA    R+M E+ I+PD + Y  +I+G  E  + K+A  L  +M   G+ PD + Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            ALI  +C  G L++A  L  E+ ++  LP+  T+++LI G+ +     +A++L  K+  
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 407 AGCFPSVGMFNALID---------------GLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
               PS   ++ LI+               G C  G + +A+ +F  M            
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM------------ 631

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
             G N   D  +   M+  +C AG I KAY +  ++ +SG L   +T  +L+    K G 
Sbjct: 632 -LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690

Query: 512 IN 513
           +N
Sbjct: 691 VN 692



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 203/437 (46%), Gaps = 33/437 (7%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +++I  + K    +   + LD++R   +      +  L+ G+ + G   +A    
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M +    P V  YNA++N          A+AV  +M +    P++V++S +++G  +S
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
              + A+++  EM ++GI P+  TY+ +I G C+  R  EA  L+ +M   G  PD   Y
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            AL+N +C    +++AL L     + G +P + +YS LI+GL +  R  EA     K+F 
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           E+  P  V Y  +I                S++  + +V       +LIKGFC  G++ +
Sbjct: 584 EESVPSDVTYHTLIEN-------------CSNIEFKSVV-------SLIKGFCMKGMMTE 623

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +   +  ++  P+   + I+I G CR G +  A  L+ +M K+G         AL+ 
Sbjct: 624 ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVK 683

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L K G++ + N +   +         LR  +    + +    + +VE     G +    
Sbjct: 684 ALHKEGKVNELNSVIVHV---------LRSCE----LSEAEQAKVLVEINHREGNMDVVL 730

Query: 482 KILMQLAESGNLPDIIT 498
            +L ++A+ G LP+ I+
Sbjct: 731 DVLAEMAKDGFLPNGIS 747


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 239/464 (51%), Gaps = 16/464 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F V++  + K G      + F +M +    PD   YN +++   +K     A  +Y EM
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V +   P+I T++ L+N   K  K + A+++   M ++G  P+  TY+ +ISGLC+  + 
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 220 DEAYR-LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            EA   LF KM + GCS + VAYNAL+NG CK   ++ A  LL      G+VP   +Y+ 
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++ GL R  +  EA  ++  M      PDVV Y  ++  L + GK  +AMKL  D+  +G
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            +PDT  YN+++ G      +D+A  +  ++      PN  T++I++ G CR   VDDA 
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           K+  +M K G  P V  +N L+DGLCK   ++KA+ LF  M + G  P            
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP------------ 357

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  S   ++   C    +H A  +  ++ E   +PD++T+N L++G CK G ++ A  
Sbjct: 358 --DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 415

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L  ++   G  PD V Y TL+NGL++  R   A R+   M + G
Sbjct: 416 LLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 237/455 (52%), Gaps = 18/455 (3%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +G+ L+ Q LD      +S     + +LI GY K G  ++A   + +M     +P +Y Y
Sbjct: 26  DGYKLFEQMLD----NGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTY 81

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML-DEMT 195
           N++LN   ++     A+ ++  M +    P++VT+S +I+GL K+GK   A++ML  +M 
Sbjct: 82  NSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI 141

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           +RG   N   Y  +I+GLC+    + AY+L  +M   G  PD + YN +L+G C++ +V 
Sbjct: 142 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVS 201

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA     S    G+ P + +Y+ L+D L++  + DEA   ++ +  +   PD V Y  ++
Sbjct: 202 EAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL+    + +A ++   M   G  P+   Y+ ++ G C    +D A  +  E+ K  ++
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+ IL+ G+C+  +VD A +LF+ M   GC P +  ++ +++GLCK  ++  A +L
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F +M   K              V D  +   +++  C AG + +A  +L Q+  SG  PD
Sbjct: 382 FDRMIERK-------------LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            + YN+L+NG  K G    A +L + ++ KG   D
Sbjct: 429 YVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 14/429 (3%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C PN  TF +++    K GK     K+ ++M   GI P+   Y I+I G  +  R DEA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           RL+ +M   G  P    YN+LLN FCK  ++ EA+ L ++  + GF P + +YS +I GL
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 284 FRAKRYDEAYAW-YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +  +  EA    + KM E     + V Y  +I GL +   ++ A KLL +M  +G VPD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN ++ G C +G + +A+     +  R   P+   +  L+  + + G  D+A KLF 
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +   G  P    +N+++ GL +   +++A  +F KM           ++ G     + A
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM-----------VASGC--APNGA 290

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++  +C A  +  A+K+L ++++ G +PD++TYN L++G CK   ++ A +LF  +
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              G  PD V+Y  ++NGL + ++  DA  +F +M +    P    +  LM   C+  K 
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410

Query: 583 SLAFSLWLQ 591
             A  L  Q
Sbjct: 411 DEAKDLLDQ 419



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 230/473 (48%), Gaps = 23/473 (4%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++  ++    +  +  + Y  + +M +  I PD + Y ++I G ++ G+V +A +L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M   G+ P  Y YN+L+  FC    + +A  L   + ++   P+  T++ +I G+C+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 391 NGMVDDA-QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
            G V +A + LF+KM + GC  +   +NALI+GLCK   +E+A  L  +M          
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA--------- 176

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
             S+G   V D  +  T++   C  G + +A +    +   G  PD++ YN L++   K 
Sbjct: 177 --SKG--YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 232

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G  + A+KLFK++  KG  PD+VTY +++ GL R    ++A  +F +M  +GC P+ A Y
Sbjct: 233 GKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             +++  CR +K   A  + L+ +  I    D    +I   L      N +    E+   
Sbjct: 293 SIVLSGHCRAKKVDDAHKV-LEEMSKIGAVPDVVTYNI--LLDGLCKTNLVDKAHELFST 349

Query: 630 LNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           + D   AP    Y++ L GLC+  +V +A  +F  ++E K +    +   L+ GLCK G 
Sbjct: 350 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           LD A D+      +G        N L+  L   K  + + A  L   MK  G+
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGL--RKQGRHIQADRLTQAMKEKGF 460



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 189/369 (51%), Gaps = 10/369 (2%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKT-KNPQVGFRFFIWAAKRKR 59
           + + + E + +  T+   E   EP    ++ +T+ S + KT K  +     F    +R  
Sbjct: 90  KETKMKEAMELFKTMA--EKGFEP--DVVTYSTIISGLCKTGKVTEALEMLFHKMIERGC 145

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
             +  + +A+I+ L K    +  ++ L+E+ S      +  +  ++SG  ++G   +A +
Sbjct: 146 SANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQ 205

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F  M      PDV  YN +L+  +++     A+ ++ +++    +P+ VT++ ++ GL+
Sbjct: 206 FFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 265

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           +    + A +M  +M   G  PN  TY+IV+SG C+  + D+A+++  +M   G  PD V
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVV 325

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN LL+G CK   VD+A  L  +   +G  P + SYS +++GL +  +  +A   + +M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            E K+ PDVV + +++ GL +AGK+ +A  LL  M   G  PD   YN L+      GL 
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN-----GLR 440

Query: 360 DQARSLQVE 368
            Q R +Q +
Sbjct: 441 KQGRHIQAD 449



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K +N +  ++     A +  +    + + ++S L +        Q  D + S   S    
Sbjct: 161 KDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+   YK G  ++A++ F  +      PD   YN++L    RK     A  ++ +M
Sbjct: 221 AYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V   C PN  T+S++++G  ++ K + A K+L+EM++ G +P+  TY I++ GLC+ N  
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 340

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A+ LF  M D+GC+PD V+Y+ +LNG CK  +V +A  L     +   VP + +++ L
Sbjct: 341 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNIL 400

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL +A + DEA     +M      PD V Y  ++ GL + G+   A +L   M+E+G 
Sbjct: 401 MDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460

Query: 340 VPDTYCYNALIKG 352
           + D  C+ A ++ 
Sbjct: 461 LSD--CFKAPLRA 471


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 185/708 (26%), Positives = 326/708 (46%), Gaps = 52/708 (7%)

Query: 39  MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           +K++  +  F F     K K   +F++ + +I  L      D       +++    +V  
Sbjct: 176 IKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNV 235

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +F  LI  + + G  + AL    +MK    +PDV +YN  ++   +     +A   ++E
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHE 295

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M     + + VT++ +I  L K+ +   A+++ + M Q   +P  + Y  +I G     +
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++AY L  + +  GC P  V+YN +L+   +  +VDEAL      +KD  +P L +Y+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNI 414

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +ID L +A + + A      M +  + P+V+   +M+  L +A ++ DA  +   +  + 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y +LI+G    G +D+A  L  ++   + +PN   +T LI    + G  +D  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNR 457
           K++N+M + GC P + + N  +D + KAGE+EK   LF +++ +G  P            
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP------------ 582

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  S   ++     AG  H+AY++   + E G + D   YN++I+GFCK G +N A +
Sbjct: 583 --DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L +E++ KG  P  VTYG++I+GL ++DR ++A+ +F +    G   +  +Y SL+    
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +                   GR DE+   +EE +QKG   N                +  
Sbjct: 701 K------------------VGRIDEAYLIMEELMQKGLTPN----------------VYT 726

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           +   L  L +  ++ EAL  F  + + K      +   LIHGLCK    + A   +    
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           K GF  +P V  Y       +K    V A  L  + K  G   D+ +Y
Sbjct: 787 KQGF--KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 257/545 (47%), Gaps = 23/545 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I +L K +  +   +  + +        +  +  +I GY   G  E A     + + 
Sbjct: 309 TSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR 368

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P V  YN +L+   RK     AL  + EM K + +PN+ T++++I+ L K+GK E 
Sbjct: 369 KGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNIMIDMLCKAGKLET 427

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ + D M   G+ PN  T  I++  LC+  R D+A  +F  +    C PD V Y +L+ 
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +  RVDEA  L         +P    Y+ LI   F+  R ++ +  Y +M      P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++L    +  + +AG+++    L  +++  G +PD   Y  LI G    G   +A  L 
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + ++  + +T  +  +I G C++G V+ A +L  +M+  G  P+V  + ++IDGL K 
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667

Query: 427 GELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK- 482
             L++A +LF + +   I  N  ++  L  G  +V        ++E+    GL    Y  
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 727

Query: 483 --ILMQLAESGNL----------------PDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +L  L ++  +                P+ ITY+ LI+G CK+   N A   ++E+Q 
Sbjct: 728 NCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G +P+  TY T+I+GL +     +A  +F +  + G     A+Y +++       + S 
Sbjct: 788 QGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASD 847

Query: 585 AFSLW 589
           A+ L+
Sbjct: 848 AYRLF 852



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 242/502 (48%), Gaps = 14/502 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  S + ++S L +    D   +  +E++   +  +S  + ++I    K G  E AL   
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLS-TYNIMIDMLCKAGKLETALVVR 432

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             MK+    P+V   N +++   + Q    A +++  +    C P+ VT+  LI GL + 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A K+ ++M     +PN   YT +I    +  R ++ ++++ +M   GCSPD +  
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N  ++   K   +++  AL +  +  GF+P   SY+ LI GL +A    EAY  +  M E
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +    D   Y  +I G  ++GKV  A +LL +M+ +G  P    Y ++I G   +  LD+
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E   +    N   ++ LI G  + G +D+A  +  ++ + G  P+V  +N L+D
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L KA E+ +A + F  M+  K    ++  S              ++   C     +KA+
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYS-------------ILIHGLCKIRKFNKAF 779

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
               ++ + G  P++ TY ++I+G  K GNI  A  LF++ + KG   DS  Y  +I GL
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 542 QRVDREEDAFRIFGQMPQNGCT 563
              +R  DA+R+F +    GC+
Sbjct: 840 SNANRASDAYRLFEEARLKGCS 861



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 270/592 (45%), Gaps = 32/592 (5%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            ++ L+  ++++ K     ++L+EM+  G  P+  T   ++    +  +  EA+     M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +     P F AY  L+      R  D  L L +  ++ G+   +  ++ LI    R  R 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D A +   +M    +EPDVVLY V I    +AGKV  A K   +M+  G+V D   Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C    L++A  L   + +   +P  + +  +I G    G  +DA  L  +  + GC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PSV  +N ++  L + G++++A   F +M+    P L              ++   M++
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL--------------STYNIMID 417

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C AG +  A  +   + ++G  P++IT N +++  CK   ++ A  +F+ L  K  RP
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFS 587
           D+VTY +LI GL R  R ++A++++ QM      P+  VY SL+   + C R++      
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED--GHK 535

Query: 588 LWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWL 642
           ++ + LR     D   + + ++   + GE+E   + L +   ++ +    P    YTI +
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG-RALFQ---EIKNLGFIPDARSYTILI 591

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GL + G   EA  +F  + E   ++   +   +I G CK G ++ A  +       G  
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH- 650

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
             P V  Y       +K ++   AY L    KS G +L+  +Y    SL+ G
Sbjct: 651 -EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS---SLIDG 698



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 51/353 (14%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F ++K     PD   Y  +++   +      A  ++Y M +  C+ + 
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++ +I+G  KSGK   A ++L+EM  +G  P   TY  VI GL +I+R DEAY LF +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA-- 286
            K  G   + V Y++L++GF K+ R+DEA  ++    + G  P + +++CL+D L +A  
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 287 ---------------------------------KRYDEAYAWYRKMFEEKIEPDVVLYGV 313
                                            +++++A+ ++++M ++  +P+V  Y  
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           MI GL++AG + +A  L    +E+G V D+  YNA+I+G  +      A  L  E   + 
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
               T T  +L+                + + KA C     +  A++    KA
Sbjct: 860 CSIYTKTCVVLL----------------DSLHKAECIEQAAIVGAVLRETAKA 896



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/569 (23%), Positives = 238/569 (41%), Gaps = 30/569 (5%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           PN      V+  L  +N A   +R   ++ D     +  AYN+LL    + R+ +    +
Sbjct: 95  PNPELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCRE--AYNSLLMVMARTRKFNCLEQI 152

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L      GF P   +   ++    ++++  EA+ + + M + K  P    Y  +I  LS 
Sbjct: 153 LEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALST 212

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           +      + L   M+E G   + + +  LI+ F   G +D A SL  E+      P+   
Sbjct: 213 SRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVL 272

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + + I    + G VD A K F++M+  G       + ++I  LCKA  L +A  LF  M+
Sbjct: 273 YNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMD 332

Query: 441 IGKN-------PTLFLRLSQGG---------NRVHDKASLQTMVEQYCT------AGLIH 478
             K         T+ +     G          R   K  + ++V   C        G + 
Sbjct: 333 QNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVD 392

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A K   ++ +   +P++ TYN +I+  CK G +  AL +   ++  GL P+ +T   ++
Sbjct: 393 EALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMV 451

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           + L +  R +DA  IF  +    C P    Y SL+    R  +   A+ L+ Q L D + 
Sbjct: 452 DRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML-DANQ 510

Query: 599 RDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             +  + +  I  F + G  E+  +   EM        L     ++  + + G++++   
Sbjct: 511 IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRA 570

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           +F  +     I    S   LIHGL K G+   A ++F    + G +L  R  N ++    
Sbjct: 571 LFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDG-- 628

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           F K  K   AY LL  MK+ G++     Y
Sbjct: 629 FCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/503 (31%), Positives = 256/503 (50%), Gaps = 15/503 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L+S   ++     A+ S  K  E     P+    N ++N     Q   L  +V  ++
Sbjct: 93  FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P I+TF+ LINGL K+G+   A+++ D+M  RG  P+ +TYT +I+GLC++   
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  KM + GC PD V Y+ L++  CK R V+EAL +    +  G  P + SY+ L
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    R+ EA A   +M    I PD+V + ++I    + G V +A  +L  M E G+
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN+L+ G+     + +AR L   +  R   P+  +++ILI G C    +D+A++
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LFN+M   G  P+   +  LI   C+ G+L +A  LF  M                  + 
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHT-------------NGYLP 439

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++E +C  G + KA+++   +  +   P+++ Y  LI+  CK GN+N A KLF
Sbjct: 440 DLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLF 499

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            EL + GL+PD   Y T+INGL +    ++A   F +M ++GC P+   Y  ++    + 
Sbjct: 500 SELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQH 559

Query: 580 RKFSLAFSLWLQYLRDISGRDDE 602
           +  S A  L +  +RD     DE
Sbjct: 560 KDESRAVQL-IGEMRDKGFVADE 581



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 246/528 (46%), Gaps = 25/528 (4%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV-DEALALLRSFEKDGFVPRLGSYSC 278
           D+A   F  M      P  + +N LL+   ++R+  D  ++L +  E  G  P   + + 
Sbjct: 72  DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+     +  D  ++   K+ +  ++P ++ +  +I GL +AG+   A++L  DM  RG
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD Y Y  +I G C +G    A  L  ++ +    P+  T++ LI  +C++ +V++A 
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            +F+ M+  G  P+V  + +LI GLC     ++A+ +  +M                N +
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM-------------TSLNIM 298

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++ +C  G + +A  +L  + E G  P++ITYNSL++G+     +  A KL
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  +  +G +PD  +Y  LING   V R ++A ++F +M   G TP+   Y +L+   C+
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418

Query: 579 RRKFSLAFSLWLQ-----YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             K   A  L+       YL D+          +E F ++G +  A +    M       
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYS----VLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L  YTI +  +C+ G +  A  +FS L              +I+GLCK G LD A++ F
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
               ++G        N ++R  L  KD  +  A  L+  M+  G+  D
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESR--AVQLIGEMRDKGFVAD 580



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 152/288 (52%), Gaps = 2/288 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+ S N+      F +LI  + K G+  +A      M E   +P+V  YN++++    
Sbjct: 289 LNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL 348

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +   + A  ++  M+   C P++ ++S+LING     + + A ++ +EM  +G+ PN  +
Sbjct: 349 QMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I   CQ+ +  EA  LF  M  +G  PD   Y+ LL GFCK   + +A  L R+ +
Sbjct: 409 YTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P L  Y+ LID + ++   + A   + ++F   ++PDV +Y  +I GL + G + 
Sbjct: 469 GTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLD 528

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +A++    M E G  P+ + YN +I+GF  L   D++R++Q+    RD
Sbjct: 529 EALEAFRKMEEDGCPPNEFSYNVIIRGF--LQHKDESRAVQLIGEMRD 574



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 164/395 (41%), Gaps = 64/395 (16%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL-LFYKMEI-GKNPTLFLRL 451
           +DDA   FN M      P +  FN L+  + +  +   A + L  +ME+ G +P      
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSP------ 124

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   +  +L  ++  +C    +   + +L ++ + G  P IIT+ +LING CK G 
Sbjct: 125 --------NTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              AL+LF ++  +G +PD  TY T+INGL ++     A  +  +M + GC P    Y +
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236

Query: 572 LMTWSCRRRKFSLAFSLW------------LQYLRDISG-------RDDESMKS------ 606
           L+   C+ R  + A  ++            + Y   I G       ++  +M +      
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296

Query: 607 -----------IEEFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                      I+ F ++G   E +  ++ + EM  + N   +  Y   + G     +V 
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN---VITYNSLMHGYSLQMEVV 353

Query: 653 EALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           EA  +F V++   CK  V   S   LI+G C    +D A  +F   +  G  L P   +Y
Sbjct: 354 EARKLFDVMITRGCKPDVFSYSI--LINGYCMVKRIDEAKQLFNEMIHQG--LTPNTVSY 409

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                 F +  K   A  L   M + GY  D C Y
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 97/193 (50%), Gaps = 2/193 (1%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  +E+    ++  +  +  LI  + ++G   +A E F  M      PD+  Y+ +L   
Sbjct: 392 QLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLE-G 450

Query: 144 FRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
           F KQ +L  A  ++  M      PN+V +++LI+ + KSG    A K+  E+   G+ P+
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
              YT +I+GLC+    DEA   F KM++ GC P+  +YN ++ GF + +    A+ L+ 
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIG 570

Query: 263 SFEKDGFVPRLGS 275
                GFV   G+
Sbjct: 571 EMRDKGFVADEGT 583


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 185/708 (26%), Positives = 326/708 (46%), Gaps = 52/708 (7%)

Query: 39  MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           +K++  +  F F     K K   +F++ + +I  L      D       +++    +V  
Sbjct: 176 IKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNV 235

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +F  LI  + + G  + AL    +MK    +PDV +YN  ++   +     +A   ++E
Sbjct: 236 HLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHE 295

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M     + + VT++ +I  L K+ +   A+++ + M Q   +P  + Y  +I G     +
Sbjct: 296 MKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGK 355

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++AY L  + +  GC P  V+YN +L+   +  +VDEAL      +KD  +P L +Y+ 
Sbjct: 356 FEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNI 414

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +ID L +A + + A      M +  + P+V+   +M+  L +A ++ DA  +   +  + 
Sbjct: 415 MIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKT 474

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y +LI+G    G +D+A  L  ++   + +PN   +T LI    + G  +D  
Sbjct: 475 CRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGH 534

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNR 457
           K++N+M + GC P + + N  +D + KAGE+EK   LF +++ +G  P            
Sbjct: 535 KIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP------------ 582

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  S   ++     AG  H+AY++   + E G + D   YN++I+GFCK G +N A +
Sbjct: 583 --DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L +E++ KG  P  VTYG++I+GL ++DR ++A+ +F +    G   +  +Y SL+    
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +                   GR DE+   +EE +QKG   N                +  
Sbjct: 701 K------------------VGRIDEAYLIMEELMQKGLTPN----------------VYT 726

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           +   L  L +  ++ EAL  F  + + K      +   LIHGLCK    + A   +    
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           K GF  +P V  Y       +K    V A  L  + K  G   D+ +Y
Sbjct: 787 KQGF--KPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIY 832



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 268/573 (46%), Gaps = 60/573 (10%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY-KVGDCEKALESFGKMKEFDCQPDV 133
           K    D+ W+   E+++  + V+ DV +  + G   K     +A+E F  M +    P  
Sbjct: 282 KAGKVDMAWKXFHEMKANGL-VLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
           Y YN ++        F  A ++     +  C+P++V+++ +++ L + G+ + A+K  +E
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M +  I PN  TY I+I  LC+  + + A  +   MKD+G  P+ +  N +++  CK +R
Sbjct: 401 MKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQR 459

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +D+A ++    +     P   +Y  LI+GL R  R DEAY  Y +M +    P+ V+Y  
Sbjct: 460 LDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTS 519

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR   + G+ +D  K+ ++M   G  PD    N  +      G +++ R+L  EI    
Sbjct: 520 LIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            +P+  ++TILI G+ + G   +A +LF  M++ GC      +N +IDG CK+G++ KA 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 434 LLFYKMEI-GKNPTLFL------------RLSQGGNRVHDKAS---------LQTMVEQY 471
            L  +M+  G  PT+              RL +      +  S           ++++ +
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699

Query: 472 CTAGLIHKAYKILMQLAESGNLPDI----------------------------------- 496
              G I +AY I+ +L + G  P++                                   
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITY+ LI+G CK+   N A   ++E+Q +G +P+  TY T+I+GL +     +A  +F +
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             + G     A+Y +++       + S A+ L+
Sbjct: 820 FKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 242/502 (48%), Gaps = 14/502 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  S + ++S L +    D   +  +E++   +  +S  + ++I    K G  E AL   
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLS-TYNIMIDMLCKAGKLETALVVR 432

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             MK+    P+V   N +++   + Q    A +++  +    C P+ VT+  LI GL + 
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A K+ ++M     +PN   YT +I    +  R ++ ++++ +M   GCSPD +  
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N  ++   K   +++  AL +  +  GF+P   SY+ LI GL +A    EAY  +  M E
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +    D   Y  +I G  ++GKV  A +LL +M+ +G  P    Y ++I G   +  LD+
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E   +    N   ++ LI G  + G +D+A  +  ++ + G  P+V  +N L+D
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L KA E+ +A + F  M+  K    ++  S              ++   C     +KA+
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYS-------------ILIHGLCKIRKFNKAF 779

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
               ++ + G  P++ TY ++I+G  K GNI  A  LF++ + KG   DS  Y  +I GL
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 542 QRVDREEDAFRIFGQMPQNGCT 563
              +R  DA+R+F +    GC+
Sbjct: 840 SNANRASDAYRLFEEARLKGCS 861



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 270/592 (45%), Gaps = 32/592 (5%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            ++ L+  ++++ K     ++L+EM+  G  P+  T   ++    +  +  EA+     M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +     P F AY  L+      R  D  L L +  ++ G+   +  ++ LI    R  R 
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D A +   +M    +EPDVVLY V I    +AGKV  A K   +M+  G+V D   Y ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C    L++A  L   + +   +P  + +  +I G    G  +DA  L  +  + GC
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PSV  +N ++  L + G++++A   F +M+    P L              ++   M++
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNL--------------STYNIMID 417

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C AG +  A  +   + ++G  P++IT N +++  CK   ++ A  +F+ L  K  RP
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFS 587
           D+VTY +LI GL R  R ++A++++ QM      P+  VY SL+   + C R++      
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKED--GHK 535

Query: 588 LWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWL 642
           ++ + LR     D   + + ++   + GE+E   + L +   ++ +    P    YTI +
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKG-RALFQ---EIKNLGFIPDARSYTILI 591

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GL + G   EA  +F  + E   ++   +   +I G CK G ++ A  +       G  
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH- 650

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
             P V  Y       +K ++   AY L    KS G +L+  +Y    SL+ G
Sbjct: 651 -EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYS---SLIDG 698



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 51/353 (14%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F ++K     PD   Y  +++   +      A  ++Y M +  C+ + 
Sbjct: 560 FKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++ +I+G  KSGK   A ++L+EM  +G  P   TY  VI GL +I+R DEAY LF +
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA-- 286
            K  G   + V Y++L++GF K+ R+DEA  ++    + G  P + +++CL+D L +A  
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 287 ---------------------------------KRYDEAYAWYRKMFEEKIEPDVVLYGV 313
                                            +++++A+ ++++M ++  +P+V  Y  
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           MI GL++AG + +A  L    +E+G V D+  YNA+I+G  +      A  L  E   + 
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
               T T  +L+                + + KA C     +  A++    KA
Sbjct: 860 CSIYTKTCVVLL----------------DSLHKAECIEQAAIVGAVLRETAKA 896


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/593 (28%), Positives = 282/593 (47%), Gaps = 26/593 (4%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN--SAVISMLLKPNGFDLYWQTLDELRS 91
           + + + +  +P+   R    A  R    + + +    +I  L     FDL    + E+R 
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFG-KMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
               V   +    I  Y ++   + A +    ++  F  Q +  +YN +L +        
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L  + Y EM      P++VTF+ +I+ L ++ +   A+ ML+EM+   + P++ T+T ++
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    + A RL  +M + GCSP  V  N L+NG+CKL RV +AL  ++    DGF 
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFE 298

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++S  ++GL +    D A      M +E  EPDV  Y  +I  L   G++++A  +
Sbjct: 299 PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGI 358

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           ++ M + G +PDT  +N LI   C    L++A  L  E+  +   PN +TF ILI  +C+
Sbjct: 359 VNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCK 418

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL- 449
            G    A +LF +M+ +GC P    +N LID LC +G+L KA  L  +ME+   P   + 
Sbjct: 419 VGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVT 478

Query: 450 -----------RLSQGGNRVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQLA 488
                      R  +    V D+           +  T+++  C A  I  A +++ Q+ 
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  P+ +TYNS++  +CK GNI+ A  + + +   G   D VTY TLINGL +  R +
Sbjct: 539 SEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            A ++   M   G  P+P  Y  ++    R      A SL+ + + ++ G  D
Sbjct: 599 AALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFRE-MTEVGGPPD 650



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 260/585 (44%), Gaps = 23/585 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+   +  +I  L  +G  ++   ++ EM + G           I    ++   D+A+ L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 226 FLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
                D  G   +   YN LL    +  ++    +        G  P + +++ +ID L 
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           RA++   A     +M    + PD   +  ++ G  E G ++ A++L + M E G  P + 
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 345 CYNALIKGFCDLGLLDQARS-LQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFN 402
             N LI G+C LG +  A   +Q EI   D   P+  TF+  + G+C+NG VD A K+  
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIA--DGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
            M + GC P V  ++ +I+ LC  GELE+A  +  +M + G  P              D 
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLP--------------DT 371

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++   CT   + +A  +  +L   G  P++ T+N LIN  CKVG+ + A++LF+E
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++  G  PD VTY  LI+ L    +   A  +  +M  +GC  S   Y +++   C+RR+
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYTI 640
              A  ++ Q      GR+  +  ++ + L   E +++A + + +M  +        Y  
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L   C+ G + +A +I   +      V   +   LI+GLCK      A+ +       G
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               P+  N +++SL   + N    A  L   M  VG   DA  Y
Sbjct: 612 MKPTPKAYNPVIQSLF--RGNNGRDALSLFREMTEVGGPPDAFTY 654



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 133/297 (44%), Gaps = 36/297 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LI+   KVGD   A+  F +MK   C PD   YN +++          AL +  EM
Sbjct: 408 TFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM 467

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C  + VT++ +I+GL K  + E A ++ D+M   GI  N  T+  +I GLC   R 
Sbjct: 468 EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERI 527

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALL---------------------------------- 245
           D+A  L  +M   G  P+ V YN++L                                  
Sbjct: 528 DDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATL 587

Query: 246 -NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            NG CK RR   AL LLR     G  P   +Y+ +I  LFR     +A + +R+M E   
Sbjct: 588 INGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGG 647

Query: 305 EPDVVLYGVMIRGLSEAG-KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            PD   Y ++ RGL   G  +K+A   L +M + G +P+   +  L +G  +LG+ D
Sbjct: 648 PPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDD 704



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 1/225 (0%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           +S  + + +I  L K    +   +  D++    +   +  F  LI G       + A E 
Sbjct: 474 QSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAEL 533

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M     QP+   YN++L    ++     A  +   M       ++VT++ LINGL K
Sbjct: 534 VDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCK 593

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           + +T+ A+K+L  M  +G+ P    Y  VI  L + N   +A  LF +M + G  PD   
Sbjct: 594 ARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFT 653

Query: 241 YNALLNGFCKLRR-VDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           Y  +  G C+    + EA   L     +GF+P   S+  L +GL 
Sbjct: 654 YKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLL 698


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 248/470 (52%), Gaps = 13/470 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +L+S Y +    ++ALE    MKE +  P     N++L++  +     +A  VY EM
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK+N   +IVTF+++IN L + GK + A   +  M   G+ PN  TY  VI+G C   + 
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A ++F  MKD    PD   YN+ ++  CK RR++EA  +L    + G VP   +Y+ L
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG       D+A+A+  +M    I   V  Y ++I  L    ++++A  ++ +MRE+G+
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN  I G+C  G   +A SL  E+ +++  P   T+T LI    +   + +A++
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            F K  K G  P + MFNALIDG C  G +++A  L  +M+  K              V 
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK-------------VVP 495

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D+ +  T+++ YC    + +A K+L ++ E G  PD I+YN+LI+G+ K G++  AL++F
Sbjct: 496 DEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVF 555

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            E+   G  P  +TY  LI G  ++   + A  +  +M   G TP  + Y
Sbjct: 556 DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 214/466 (45%), Gaps = 50/466 (10%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           + W   +E+   N+      F ++I+   + G  +KA +  G M+ +  +P+V  YN V 
Sbjct: 200 MAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV- 258

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
                                             ING    GK E A K+   M  + + 
Sbjct: 259 ----------------------------------INGYCLRGKFEAASKIFKTMKDKNLK 284

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ +TY   IS LC+  R +EA  +  K+ +SG  P+ V YNAL++G C    +D+A A 
Sbjct: 285 PDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAY 344

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                  G V  + +Y+ LI  LF  KR +EA    ++M E+ +EPDVV Y + I G   
Sbjct: 345 RDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCR 404

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G  K A+ L  +M E+ I P    Y +LI  F     + +A     +  K   LP+   
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           F  LI G C NG +D A +L  +M+ A   P    FN L+ G C+  ++E+A  L  +M 
Sbjct: 465 FNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK 524

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E G  P              D  S  T++  Y   G +  A ++  ++   G  P ++TY
Sbjct: 525 ERGIKP--------------DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTY 570

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           N+LI G+ K+G  + A +L +E+Q KG+ PD  TY  +I  ++  D
Sbjct: 571 NALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTND 616



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 237/468 (50%), Gaps = 30/468 (6%)

Query: 130 QPDVYIYNAVLNIAFRKQLF-LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           +P  +I   +L+      +F  L+LA      +LN    +V F LL++   +  K + A+
Sbjct: 113 KPSFHILQPILHTTTPTVIFNELSLA----RNRLNVKTTLV-FDLLLSAYCQFRKPDEAL 167

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           + L+ M +  I+P   T   ++S L ++N+   A+ ++ +M         V +N ++N  
Sbjct: 168 ECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINIL 227

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+  +  +A   +   E  G  P + +Y+ +I+G     +++ A   ++ M ++ ++PD 
Sbjct: 228 CREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDC 287

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y   I  L +  ++++A  +L  + E G+VP+   YNALI G C+ G LD+A + + E
Sbjct: 288 YTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDE 347

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  R  + +  T+ +LI  +     +++A+ +  +M + G  P V  +N  I+G C+ G 
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407

Query: 429 LEKANLLFYKMEIGKN--PTLFL------------RLSQGGNR---------VHDKASLQ 465
            +KA  LF +M + KN  PT+              R+S+   +         + D     
Sbjct: 408 AKKALSLFDEM-VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFN 466

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ +C  G I +A+++L ++  +  +PD +T+N+L+ G+C+   +  A KL  E++ +
Sbjct: 467 ALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           G++PD ++Y TLI+G  +    +DA  +F +M   G  P+   Y +L+
Sbjct: 527 GIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 228/513 (44%), Gaps = 61/513 (11%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW--Y 296
           + ++ LL+ +C+ R+ DEAL  L   +++  +P+  + +C        K      AW  Y
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPK--TETCNSLLSLLLKLNKIKMAWFVY 205

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M +  I+  +V + +MI  L   GK K A   +  M   G+ P+   YN +I G+C  
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G  + A  +   +  ++  P+ +T+   I  +C+   +++A  +  K+ ++G  P+   +
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           NALIDG C  G+L+KA    Y+ E+         +++G   V    +   ++        
Sbjct: 326 NALIDGCCNKGDLDKA--FAYRDEM---------MNRGI--VASVFTYNLLIHALFLEKR 372

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           I +A  ++ ++ E G  PD++TYN  ING+C+ GN   AL LF E+  K +RP   TY +
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI+   + +R  +A   F +  + G  P   ++ +L+   C                   
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHC------------------- 473

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVK 652
                            G ++ A Q L EMD    + ++ P    +   + G C++ +V+
Sbjct: 474 ---------------VNGNIDRAFQLLKEMD----NAKVVPDEVTFNTLMQGYCRERKVE 514

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  +   + E        S   LI G  KRG +  A++VF   L  GF   P +  Y  
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF--DPTLLTYNA 572

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               +SK  +  HA  LL  M+S G   D   Y
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/625 (28%), Positives = 299/625 (47%), Gaps = 69/625 (11%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            V++S + +    + AL +F  +     C P V  +N +L+   R + +  A A +  + 
Sbjct: 87  LVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLS 146

Query: 161 K----LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
                    PN+ T+++++  L   G  + A+ +   + +RG+ P++ TY+ ++SGL + 
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGS 275
           ++ D A  L  +M + G   D V YNALL+G  +    ++A+ +     +D G  P L +
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLAT 266

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y  ++DGL +  R+ EA   + +M     + D V YG++I GL  +G V  A ++ SDM 
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMV 326

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH---TFTILICGMCRNG 392
           + G+V D   YN+LIKGFC++G   +A     + W            T+ I+  G+  +G
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEA----WKFWDSTGFSGIRQITTYNIMTKGLLDSG 382

Query: 393 MVDDAQKLFNKMEK-AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           MV +A +L  ++E  A C P    F  LI GLC+ G    AN  F  +E  +N    L  
Sbjct: 383 MVSEATELLKQLENDASCSPDKVTFGTLIHGLCENG---YANRAFEILEDARNSGEEL-- 437

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  S  +M+ ++C  G  H A ++   + + G  P+   YN+LINGFC+V  
Sbjct: 438 --------DVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           IN A+K++ E+   G  P  +TY TLI+GL + ++ ++A  +  +M + G  P    Y S
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   CR +K  +A  +W                  +E L  G         L++D  + 
Sbjct: 550 LIRGLCRDKKVDVALRIW------------------DEILDAG---------LQVDVMV- 581

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
                 + I + GLC  G+V EA   F + +E K     P+ V    L+ G  + G +D 
Sbjct: 582 ------HNILIHGLCSAGKVDEA---FCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLR 713
           A  ++   L NG  L+P +  Y  R
Sbjct: 633 AASLWTAILDNG--LKPDIVTYNTR 655



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 279/577 (48%), Gaps = 39/577 (6%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP----NGFDLYWQT 85
           S  T+    ++ +       FF   +     R  A N    +++L+        D     
Sbjct: 121 SHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSL 180

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
              LR   V+     +  L+SG  K    + AL+   +M  +  Q D   YNA+L+  FR
Sbjct: 181 FSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFR 240

Query: 146 KQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
             +F  A+ V+ ++V+     PN+ T+ ++++GL K G+ + A ++   M       +  
Sbjct: 241 TGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTV 300

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY I+I GLC+    D A R++  M  +G   D   YN+L+ GFC++ R  EA      +
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF---W 357

Query: 265 EKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEA 321
           +  GF  + ++ +Y+ +  GL  +    EA    +++  +    PD V +G +I GL E 
Sbjct: 358 DSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCEN 417

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G    A ++L D R  G   D + Y+++I  FC  G    A  +   + K    PN+H +
Sbjct: 418 GYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVY 477

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
             LI G CR   ++DA K++ +M   GC P++  +N LIDGLCKA + ++A+ L  +M E
Sbjct: 478 NALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE 537

Query: 441 IGKNPTL--FLRLSQG---------GNRVHDK---ASLQT-------MVEQYCTAGLIHK 479
            G  P +  +  L +G           R+ D+   A LQ        ++   C+AG + +
Sbjct: 538 RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDE 597

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A+ I +++ E    P+++TYN+L++GF ++G+I+ A  L+  +   GL+PD VTY T I 
Sbjct: 598 AFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIK 657

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           GL   +R  +   +  ++   G  P      +++TWS
Sbjct: 658 GLCSCNRTPEGVLLLNEVLATGIMP------TVITWS 688



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 227/524 (43%), Gaps = 54/524 (10%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG----CSPDFVAYNALLNGFCKLRR 253
           G  P   ++  ++    +  R  +A   F  +         +P+   YN +L   C    
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           VD A++L  S  + G  P   +YS L+ GL +  + D A     +M    ++ D V Y  
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233

Query: 314 MIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           ++ G    G  + AMK+   + R+ G  P+   Y  ++ G C LG   +A  +   +   
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           +   +T T+ ILI G+CR+G VD A ++++ M KAG    V ++N+LI G C+ G   +A
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
              F+              S G + +    +   M +    +G++ +A ++L QL    +
Sbjct: 354 -WKFWD-------------STGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDAS 399

Query: 493 L-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD +T+ +LI+G C+ G  N A ++ ++ +  G   D  +Y ++IN   +  R  DA 
Sbjct: 400 CSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDAN 459

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            ++  M ++GC P+  VY +L+   CR  K + A  +++                  E  
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI------------------EMT 501

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
             G     I                 Y   + GLC+  + +EA ++   ++E        
Sbjct: 502 SNGCCPTIIT----------------YNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIR 545

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           +   LI GLC+   +D+A+ ++   L  G  +   V N L+  L
Sbjct: 546 TYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGL 589



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 169/332 (50%), Gaps = 1/332 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + ++  G    G   +A E   +++ +  C PD   +  +++          A  +  +
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
                   ++ ++S +IN   K G+T  A ++   M + G  PN   Y  +I+G C++++
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++A +++++M  +GC P  + YN L++G CK  +  EA +L +   + GF P + +Y+ 
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL R K+ D A   + ++ +  ++ DV+++ ++I GL  AGKV +A  +  +M+E+ 
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+   YN L+ GF ++G +D+A SL   I      P+  T+   I G+C      +  
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGV 669

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            L N++   G  P+V  ++ L+  + K G ++
Sbjct: 670 LLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 3/154 (1%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           +R++AS   +I  L +    D+  +  DE+    + V   V  +LI G    G  ++A  
Sbjct: 544 IRTYAS---LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFC 600

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            + +MKE +C P++  YN +++  +       A +++  ++     P+IVT++  I GL 
Sbjct: 601 IYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
              +T   + +L+E+   GI+P   T++I++  +
Sbjct: 661 SCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 246/489 (50%), Gaps = 31/489 (6%)

Query: 130 QPDVYIYNAVLNI--AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           +PDVY    ++N         F  A +V   M KL   PN VTFS L+NGLS   K   A
Sbjct: 7   RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +K+ DEM + G  P+  TY+ +I+GLC++     A +L  KM++ GC P+ V Y+ +++ 
Sbjct: 67  VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK + + EA+  L      G  P + +YS ++ G     R +EA + +++M E  + PD
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V + +++ GLS+ G + +A  +   M E+G+ P+   YNAL+ G+C    +D+A+ L  
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFN 246

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + ++   P+  ++ ILI G C++G +D+A+ L  +M      P    ++ L+ G C+ G
Sbjct: 247 IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
             + A  L  +M            S G   + D  +   +++  C  G + +A+++L  +
Sbjct: 307 RPQDAQKLLEEMR-----------SYG--LLPDLMTYSIVLDGLCKQGHLDEAFELLKAM 353

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            ES   P+I  Y  LI G C  G +  A +LF  L +KG++PD VTY  +I+GL +    
Sbjct: 354 QESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLS 413

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR---------------RKFSLAFSLWLQY 592
            +A  +F  M  +GC P+   Y  ++    R                R FS A S   Q 
Sbjct: 414 NEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFS-ADSSTFQM 472

Query: 593 LRDISGRDD 601
           L D+  RD+
Sbjct: 473 LSDLESRDE 481



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 242/469 (51%), Gaps = 15/469 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A    G M +   QP+   ++ +LN    K   + A+ ++ EMVK+   P+++T+S +IN
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K G T +AI++L +M ++G  PN   Y+ +I  LC+     EA     +M + G SP
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V Y+++L+GFC L R +EA +L +   +   +P   +++ L+DGL +     EA   +
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M E+ +EP+V  Y  ++ G     ++ +A KL + M  +G  P    YN LIKG C  
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +D+A+ L  E+  +   P+T T++ L+ G C++G   DAQKL  +M   G  P +  +
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           + ++DGLCK G L++A  L   M+  K  P +F+                 +++  C  G
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI--------------YTILIQGMCNFG 376

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A ++   L   G  PD++TY  +I+G  K G  N A +LF+++ + G  P+S TY 
Sbjct: 377 KLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYN 436

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            +I G  R     +A R+  +M   G +   + ++ L     R    SL
Sbjct: 437 VIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLESRDEIISL 485



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 229/438 (52%), Gaps = 13/438 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G         A++ F +M +   +PDV  Y+ ++N   +     +A+ +  +M
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C PN+V +S +I+ L K      A++ L EM  RGI PN  TY+ ++ G C + R+
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  LF +M +    PD V +N L++G  K   + EA  +  +  + G  P + +Y+ L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG     + DEA   +  M  +   P V  Y ++I+G  ++G++ +A  LL++M  + +
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PDT  Y+ L+KGFC  G    A+ L  E+     LP+  T++I++ G+C+ G +D+A +
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L   M+++   P++ ++  LI G+C  G+LE A  LF          LF++  Q      
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELF--------SNLFVKGIQ-----P 395

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   M+      GL ++A ++   +A  G LP+  TYN +I GF + G+ + A +L 
Sbjct: 396 DVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLI 455

Query: 520 KELQLKGLRPDSVTYGTL 537
           +E+  +G   DS T+  L
Sbjct: 456 EEMVGRGFSADSSTFQML 473



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 193/377 (51%), Gaps = 8/377 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I+ L K     +  Q L ++          V+  +I    K     +A+E   +M  
Sbjct: 86  STIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145

Query: 127 FDCQPDVYIYNAVL----NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
               P+V  Y+++L    N+    +    A +++ +MV+ N +P+ VTF++L++GLSK G
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNE----ATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A  + + M ++G+ PN  TY  ++ G C  ++ DEA +LF  M   GC+P   +YN
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYN 261

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+ G CK  R+DEA  LL         P   +YS L+ G  +  R  +A     +M   
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PD++ Y +++ GL + G + +A +LL  M+E  I P+ + Y  LI+G C+ G L+ A
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           R L   ++ +   P+  T+T++I G+ + G+ ++A +LF  M   GC P+   +N +I G
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441

Query: 423 LCKAGELEKANLLFYKM 439
             + G+   A  L  +M
Sbjct: 442 FLRNGDTSNAGRLIEEM 458



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 181/355 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K        + L E+ +  +S     +  ++ G+  +G   +A   F +M E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  PD   +N +++   ++ + L A  V+  M++    PN+ T++ L++G     + + 
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+ + M ++G  P+  +Y I+I G C+  R DEA  L  +M     +PD V Y+ L+ 
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+  R  +A  LL      G +P L +YS ++DGL +    DEA+   + M E KIEP
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           ++ +Y ++I+G+   GK++ A +L S++  +GI PD   Y  +I G    GL ++A  L 
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            ++     LPN+ T+ ++I G  RNG   +A +L  +M   G       F  L D
Sbjct: 421 RDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 185/415 (44%), Gaps = 63/415 (15%)

Query: 339 IVPDTYCYNALIKGFC--DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           I PD Y    LI  FC  +      A S+   ++K    PN  TF+ L+ G+     + D
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGG 455
           A KLF++M K G  P V  ++ +I+GLCK G    A  L  KME  G  P + +      
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV------ 119

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T+++  C   LI +A + L ++   G  P+++TY+S+++GFC +G  N A
Sbjct: 120 --------YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEA 171

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             LFK++  + + PD+VT+  L++GL +     +A  +F  M + G  P+   Y +LM  
Sbjct: 172 TSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDG 231

Query: 576 SCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIEE--------- 609
            C + +   A  L+   +R                   SGR DE+   + E         
Sbjct: 232 YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291

Query: 610 ----------FLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEAL 655
                     F Q G  ++A Q LLE   ++  + L P    Y+I L GLC+ G + EA 
Sbjct: 292 TVTYSTLMKGFCQDGRPQDA-QKLLE---EMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            +   + E K          LI G+C  G L+ A ++F      G  ++P V  Y
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG--IQPDVVTY 400


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/649 (26%), Positives = 301/649 (46%), Gaps = 56/649 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I+G++  G  +KA   F    E    PDV  YN +++   + Q    A  V+ +MV
Sbjct: 196 YNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV 252

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    PN VT++ +I+GL K+ + ++A  +  +M  +G+ P+  TY  +I GLC+    D
Sbjct: 253 EKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVD 312

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +F +M D G  PD V YN +++G CK + +D+A  + +     G  P   +Y+ +I
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIII 372

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL +A+  D A   +++M ++ ++P+   Y  +I G    G+ ++ ++ + +M    + 
Sbjct: 373 DGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLE 432

Query: 341 PDTYCYNALIKGFCDLGLLDQARSL-----------QVEIW--------KRDSL------ 375
           PD + Y  L+   C  G  ++ARSL            V I+        K+ +L      
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDL 492

Query: 376 ----------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
                     PN   F  +IC   +  M+D+   +F KM++ G  P+V  +  LID LCK
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G ++ A L F +M   G  P              +     ++V   CT     K  ++ 
Sbjct: 553 LGRVDDAVLQFNQMINEGVTP--------------NNVVFNSLVYGLCTVDKWEKVEELF 598

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           +++   G  PDI+ +N+++   CK G +  A +L   +   GL+PD ++Y TLI+G    
Sbjct: 599 LEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFA 658

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R ++A ++   M   G  P+   Y +L+   C+  +   A+ L+ + LR       E+ 
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718

Query: 605 KSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            +I     + G    A +  + M      + +  Y+I L G C++    EA  IF  L  
Sbjct: 719 NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
               +   +   +I GL K G  + AMD+F     NG +  P V  Y L
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLV--PSVVTYRL 825



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/707 (26%), Positives = 340/707 (48%), Gaps = 34/707 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D       ++    V   +  +  +I G  K  + + A   F KM +
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P    YN +++   + Q    A  V+ +M+     P+ VT++ +I+GL K+   + 
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDK 348

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  +M  +G+ P+  TYTI+I GLC+    D A  +F +M D G  P+   YN L++
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+    + +E +  ++        P + +Y  L+D L +  + +EA + +  M  + I+P
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V +YG+M+ G  + G + +   LL+ M   GI P+   +N +I  +    ++D+   + 
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           +++ ++   PN  T+  LI  +C+ G VDDA   FN+M   G  P+  +FN+L+ GLC  
Sbjct: 529 IKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTV 588

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            + EK   LF +M           L+QG     D     T++   C  G + +A +++  
Sbjct: 589 DKWEKVEELFLEM-----------LNQGIR--PDIVFFNTVLCNLCKEGRVMEARRLIDS 635

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G  PD+I+YN+LI+G C    ++ A+KL   +   GL+P+ V+Y TL++G  +  R
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGR 695

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            ++A+ +F +M + G TP    Y +++    R  +FS A  L   Y+  I  R   S+ +
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL---YVNMIKSRKLWSICT 752

Query: 607 ----IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
               ++ F +    + A    Q L  MD +L+   +  + I + GL + G+ ++A+++F+
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD---IITFNIMIDGLFKGGRKEDAMDLFA 809

Query: 660 VLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             +    +V      +LI   L + G L+    +F    K+G      + N L+R LL  
Sbjct: 810 A-IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDR 868

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
            +  +  AY  L ++    + L+A     T S+L   ++  E +  +
Sbjct: 869 GEIPRAGAY--LSKLDEKNFSLEA----STTSMLISLFSREEYQQHA 909



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 162/611 (26%), Positives = 275/611 (45%), Gaps = 67/611 (10%)

Query: 181 SGKTEVAIKMLDEMTQ---RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           S  +++A+   + M +     + P+  TY+IVI   C+I R +  +  F  +  +G   D
Sbjct: 59  SSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVD 118

Query: 238 FVAYNALLNGFCKLRRVDEAL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
            +  N LL G C  +RV EA+  LLR   + G    + SY+ L+ GL   +R +EA    
Sbjct: 119 DIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELL 178

Query: 297 RKMF---EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             M    +    PDVV Y ++I G    G+V  A  L  +M   G+ PD   YN +I G 
Sbjct: 179 HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGL 235

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C    +D+A  +  ++ ++   PN  T+  +I G+C+   VD A+ +F KM   G  PS 
Sbjct: 236 CKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSN 295

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N +IDGLCKA  +++A  +F +M + G  P              D  +  T+++  C
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKP--------------DHVTYNTIIDGLC 341

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            A  I KA  +  Q+ + G  PD +TY  +I+G CK  +++ A  +F+++  KG++P++ 
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  LI+G     + E+  +   +M  +   P    Y  L+ + C+  K + A SL+   
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461

Query: 593 LRD------------ISGRDDESMKSIEEFLQKGEVENAIQ------------------- 621
           +R             + G   +   S    L    V N I                    
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521

Query: 622 -GLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-- 674
             ++ +  K+    L+P    Y   +  LC+ G+V +A+  F+ ++     VTP + V  
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMI--NEGVTPNNVVFN 579

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            L++GLC     +   ++FL  L  G  +RP +  +        K+ + + A  L+  M 
Sbjct: 580 SLVYGLCTVDKWEKVEELFLEMLNQG--IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV 637

Query: 735 SVGYDLDACLY 745
            +G   D   Y
Sbjct: 638 CMGLKPDVISY 648



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 35/339 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+ G   V   EK  E F +M     +PD+  +N VL    ++   + A  +   M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V +   P++++++ LI+G   + + + A+K+LD M   G+ PN  +Y  ++ G C+  R 
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNG-------------------------------- 247
           D AY LF +M   G +P    YN +LNG                                
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756

Query: 248 ---FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
              FCK    DEA  + +S         + +++ +IDGLF+  R ++A   +  +    +
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P VV Y ++   L E G +++   L S M + G  P+++  NALI+   D G + +A +
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGA 876

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
              ++ +++      T ++LI    R      A+ L  K
Sbjct: 877 YLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEK 915


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/584 (28%), Positives = 270/584 (46%), Gaps = 58/584 (9%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    L++GY + G  + A    G M      PD Y Y  ++ +   +     AL++ 
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 166

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M++  C PN+VT+++L+  + ++   E A+ +LDEM  +G  PN  TY ++I+G+C+ 
Sbjct: 167 DDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 226

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R D+A  L  ++   G  PD V+Y  LL G C  +R D+   L     +   +P   ++
Sbjct: 227 GRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 286

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             LI    R    + A     +M E     +  L  ++I  + + G+V DA KLL+DM  
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGS 346

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PDT  Y  ++KG C     D A+ L  E+ + +  PN  TF   IC +C+ G+++ 
Sbjct: 347 YGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQ 406

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-- 454
           A  L  +M + GC   V  +NAL++G C  G ++ A  LF  M    N   +  L  G  
Sbjct: 407 AIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLC 466

Query: 455 -GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              R+   A L                  +V  +C  G + +A +++ Q+ E G  P++I
Sbjct: 467 NAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLI 526

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN+L++G  K  +   AL+L   L  KG+ PD +T+ ++I  L + DR E+A ++F  +
Sbjct: 527 TYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVV 586

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              G  P   VY  ++   C+R                                   E++
Sbjct: 587 QDIGMRPKAVVYNKILLGLCKR----------------------------------CEID 612

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           NAI     M         + Y I + GL  +G +KEA ++ SVL
Sbjct: 613 NAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 279/564 (49%), Gaps = 41/564 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L      G   + F Y  +++G C+    D A RL
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M     +PD   Y  L+   C   RV +AL+LL    + G  P + +Y+ L++ + R
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
              +++A A   +M  +   P++V Y V+I G+   G+V DA +LL+ +   G  PDT  
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  L+KG C     D    L  E+ +++ +PN  TF +LI   CR GMV+ A ++  +M 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQG---- 454
           + GC  +  + N +I+ +CK G ++ A  L   M   G NP      T+   L +     
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 455 -----------GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                       N   ++ +  T +   C  GLI +A  ++ Q++E G    ++TYN+L+
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALV 430

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC  G+I+ AL+LF+ +  K   P+++TY TL+ GL   +R + A  +  +M +  C 
Sbjct: 431 NGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCP 487

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   +  L+++ C++     A  L  Q +      +  +  ++ + + K   + + +  
Sbjct: 488 PNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK---DCSSEDA 544

Query: 624 LEMDFKLNDFQLAPYTIW---LIG-LCQDGQVKEALNIFSVLVECKAIVTPPSCV---KL 676
           LE+   L    ++P  I    +IG L ++ +++EA+ +F V+   + I   P  V   K+
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVV---QDIGMRPKAVVYNKI 601

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNG 700
           + GLCKR  +D A+D F Y + NG
Sbjct: 602 LLGLCKRCEIDNAIDFFAYMVSNG 625



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 279/610 (45%), Gaps = 59/610 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDVY+   ++    R+     A  V           ++  ++ L+ G  + G  + A ++
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           +  M    + P+ +TYT +I  LC   R  +A  L   M   GC P+ V Y  LL   C+
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
               ++A+A+L      G  P + +Y+ +I+G+ R  R D+A     ++     +PD V 
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +++GL  + +  D  +L ++M E+  +P+   ++ LI+ FC  G++++A  +  ++ 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +     NT    I+I  +C+ G VDDA KL N M   GC P    +  ++ GLC+A   +
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  L  +M     P              ++ +  T +   C  GLI +A  ++ Q++E 
Sbjct: 371 DAKELLNEMVRNNCPP-------------NEVTFNTFICILCQKGLIEQAIMLIEQMSEH 417

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G    ++TYN+L+NGFC  G+I+ AL+LF+ +  K   P+++TY TL+ GL   +R + A
Sbjct: 418 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGA 474

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL----------------- 593
             +  +M +  C P+   +  L+++ C++     A  L  Q +                 
Sbjct: 475 AELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDG 534

Query: 594 --RDISGRDDESMKSIEEFLQKG---------------EVENAIQGLLEMDFKLNDFQLA 636
             +D S  D  +++ +   + KG                 E+ I+  +++   + D  + 
Sbjct: 535 ITKDCSSED--ALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMR 592

Query: 637 P----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           P    Y   L+GLC+  ++  A++ F+ +V    +    + + LI GL   G L  A D+
Sbjct: 593 PKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDL 652

Query: 693 FLYTLKNGFI 702
                  G +
Sbjct: 653 LSVLCSRGVL 662



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 227/476 (47%), Gaps = 18/476 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++  + + +GF+     LDE+R+   +     + V+I+G  + G  + A E   ++  
Sbjct: 182 TVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS 241

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           +  QPD   Y  +L      + +     ++ EM++ NC+PN VTF +LI    + G  E 
Sbjct: 242 YGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 301

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI++L++MT+ G   N     IVI+ +C+  R D+A++L   M   GC+PD ++Y  +L 
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLK 361

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  R D+A  LL    ++   P   +++  I  L +    ++A     +M E     
Sbjct: 362 GLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            VV Y  ++ G    G +  A++L   M  +   P+T  Y  L+ G C+   LD A  L 
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELV 478

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ + D  PN  TF +L+   C+ G +++A +L  +M + GC P++  +N L+DG+ K 
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD 538

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
              E A  LL   +  G +P              D  +  +++        I +A ++  
Sbjct: 539 CSSEDALELLHGLVSKGVSP--------------DVITFSSIIGILSKEDRIEEAVQLFH 584

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            + + G  P  + YN ++ G CK   I+ A+  F  +   G  P+  TY  LI GL
Sbjct: 585 VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 244/544 (44%), Gaps = 31/544 (5%)

Query: 216 INRADEAYRLFLKMKDSGC---SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           I R D A  + L  +   C   +PD      L+   C+  R  +A  +LR+ E  G    
Sbjct: 51  IAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVD 110

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+ L+ G  R    D A      M    + PD   Y  +IR L + G+V DA+ LL 
Sbjct: 111 VFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLD 167

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           DM  RG  P+   Y  L++  C     +QA ++  E+  +   PN  T+ ++I GMCR G
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            VDDA++L N++   G  P    +  L+ GLC +   +    LF +M             
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM------------- 274

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
              N + ++ +   ++  +C  G++ +A ++L Q+ E G   +    N +IN  CK G +
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRV 334

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A KL  ++   G  PD+++Y T++ GL R +R +DA  +  +M +N C P+   + + 
Sbjct: 335 DDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTF 394

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLN 631
           +   C++     A  L  Q           +  + +  F  +G +++A++    M  K N
Sbjct: 395 ICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPN 454

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDL 688
                 YT  L GLC   ++  A  + + ++       PP+ V    L+   C++G+L+ 
Sbjct: 455 TIT---YTTLLTGLCNAERLDGAAELVAEMLRGDC---PPNVVTFNVLVSFFCQKGFLEE 508

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT 748
           A+++    +++G        N LL  +  +KD     A  LL  + S G   D   +   
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGI--TKDCSSEDALELLHGLVSKGVSPDVITFSSI 566

Query: 749 KSLL 752
             +L
Sbjct: 567 IGIL 570



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 166/357 (46%), Gaps = 32/357 (8%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L+++     +  + +  ++I+   K G  + A +    M  + C PD   Y  VL   
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--- 200
            R + +  A  +  EMV+ NC PN VTF+  I  L + G  E AI ++++M++ G     
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 201 -----------------------------PNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
                                        PN  TYT +++GLC   R D A  L  +M  
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C P+ V +N L++ FC+   ++EA+ L+    + G  P L +Y+ L+DG+ +    ++
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A      +  + + PDV+ +  +I  LS+  ++++A++L   +++ G+ P    YN ++ 
Sbjct: 544 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILL 603

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           G C    +D A      +     +PN  T+ ILI G+   G++ +AQ L + +   G
Sbjct: 604 GLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 130/255 (50%), Gaps = 3/255 (1%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++++     +V    +  L++G+   G  + ALE F  M    C+P+   Y  +L     
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCN 467

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +  EM++ +C PN+VTF++L++   + G  E AI+++++M + G  PN  T
Sbjct: 468 AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLIT 527

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++ G+ +   +++A  L   +   G SPD + +++++    K  R++EA+ L    +
Sbjct: 528 YNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQ 587

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P+   Y+ ++ GL +    D A  ++  M      P+   Y ++I GL+  G +K
Sbjct: 588 DIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLK 647

Query: 326 DAMKLLSDMRERGIV 340
           +A  LLS +  RG++
Sbjct: 648 EAQDLLSVLCSRGVL 662



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L  L S  VS     F  +I    K    E+A++ F  +++   +P   +YN +L   
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A+  +  MV   C+PN  T+ +LI GL+  G  + A  +L  +  RG+L   
Sbjct: 606 CKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKN 665

Query: 204 FT 205
            T
Sbjct: 666 LT 667


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 269/551 (48%), Gaps = 28/551 (5%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    L++GY + G  + A    G M      PD Y Y  ++ +   +     AL++ 
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M++  C PN+VT+++L+  + K+   E A+ +LDEM  +G  PN  TY ++I+G+C+ 
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R D+A  L  ++   GC PD V+Y  LL G C  +R D+   L     +   +P   ++
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             LI    R    + A    ++M E +   +  L  ++I  + + G+V DA K L++M  
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PDT  Y  ++KG C     + A+ L  E+ + +  PN  TF   IC +C+ G+++ 
Sbjct: 346 YGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQ 405

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-- 454
           A  L  +M++ GC   V  +NAL++G C  G ++ A  LF  M    N   +  L  G  
Sbjct: 406 AIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLC 465

Query: 455 -GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              R+   A L                  +V  +C  G + +A +++ Q+ E G  P++I
Sbjct: 466 NAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLI 525

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN+L +G  K  +   AL+L   L  KG+ PD +T+ ++I  L + DR E+A ++F   
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLA 585

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES--MKSIEEFLQKGE 615
              G  P   VY  ++   C+R +   A   +L Y+       +ES  +  IE   ++G 
Sbjct: 586 QDIGMRPKALVYNKILLGLCKRHEIDNAID-FLAYMVSNGCMPNESTYIILIEGLAREGL 644

Query: 616 VENAIQGLLEM 626
           ++ A Q LL M
Sbjct: 645 LKEA-QDLLSM 654



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 275/610 (45%), Gaps = 59/610 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDVY+   ++    R+     A  V           ++  ++ L+ G  + G  + A ++
Sbjct: 73  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           +  M    + P+ +TYT +I  LC   R  +A  L   M   GC P+ V Y  LL   CK
Sbjct: 133 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
               ++A+A+L      G  P + +Y+ +I+G+ R  R D+A     ++F    +PD V 
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +++GL  + +  D  +L ++M E+  +P+   ++ LI+ FC  G++++A  +  ++ 
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT 309

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           + +   NT    I+I  +C+ G VDDA K  N M   GC P    +  ++ GLC+A    
Sbjct: 310 EHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWN 369

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  L  +M     P              ++ +  T +   C  GLI +A  ++ Q+ E 
Sbjct: 370 DAKELLKEMVRNNCPP-------------NEVTFNTFICILCQKGLIEQAIMLIEQMQEH 416

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G    ++TYN+L+NGFC  G+I+ AL+LF+ +  K   P+++TY TL+ GL   +R + A
Sbjct: 417 GCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAA 473

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL----------------- 593
             +  +M    C P+   +  L+ + C++     A  L  Q +                 
Sbjct: 474 AELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDG 533

Query: 594 --RDISGRDDESMKSIEEFLQKG---------------EVENAIQGLLEMDFKLNDFQLA 636
             +D S  D  +++ +   + KG                 E+ ++  ++M     D  + 
Sbjct: 534 ITKDCSSED--ALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591

Query: 637 P----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           P    Y   L+GLC+  ++  A++  + +V    +    + + LI GL + G L  A D+
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651

Query: 693 FLYTLKNGFI 702
                  G +
Sbjct: 652 LSMLCSRGVV 661



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 230/503 (45%), Gaps = 51/503 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++  + K +GF+     LDE+R+   +     + V+I+G  + G  + A +   ++  
Sbjct: 181 TVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + CQPD   Y  +L      + +     ++ EM++ NC+PN VTF +LI    + G  E 
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI++L +MT+     N     IVI+ +C+  R D+A++    M   GC+PD ++Y  +L 
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK 360

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  R ++A  LL+   ++   P   +++  I  L +    ++A     +M E     
Sbjct: 361 GLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            VV Y  ++ G    G +  A++L   M  +   P+T  Y  L+ G C+   LD A  L 
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELV 477

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  RD  PN  TF +L+   C+ G +D+A +L  +M + GC P++  +N L DG+ K 
Sbjct: 478 AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
              E A  L +                                     GL+ K       
Sbjct: 538 CSSEDALELLH-------------------------------------GLVSK------- 553

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
               G  PD+IT++S+I    K   +  A+++F   Q  G+RP ++ Y  ++ GL +   
Sbjct: 554 ----GVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHE 609

Query: 547 EEDAFRIFGQMPQNGCTPSPAVY 569
            ++A      M  NGC P+ + Y
Sbjct: 610 IDNAIDFLAYMVSNGCMPNESTY 632



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 237/538 (44%), Gaps = 28/538 (5%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A  A  + L     G +PD      L+   C+  R  +A  +LR+ E  G    + +Y+ 
Sbjct: 56  AGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNT 115

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+ G  R    D A      M    + PD   Y  +IR L + G+V DA+ LL DM  RG
Sbjct: 116 LVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 172

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+   Y  L++  C     +QA ++  E+  +   PN  T+ ++I GMCR G VDDA+
Sbjct: 173 CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 232

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L N++   GC P    +  L+ GLC +   +    LF +M                N +
Sbjct: 233 DLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEM-------------MEKNCM 279

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +   ++  +C  G++ +A ++L Q+ E     +    N +IN  CK G ++ A K 
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKF 339

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +   G  PD+++Y T++ GL R +R  DA  +  +M +N C P+   + + +   C+
Sbjct: 340 LNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQ 399

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +     A  L  Q           +  + +  F  +G +++A++    M  K N      
Sbjct: 400 KGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTIT--- 456

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFL 694
           YT  L GLC   ++  A  + + ++       PP+ V    L++  C++G+LD A+++  
Sbjct: 457 YTTLLTGLCNAERLDAAAELVAEMLHRDC---PPNVVTFNVLVNFFCQKGFLDEAIELVE 513

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             +++G    P +  Y       +KD     A  LL  + S G   D   +     +L
Sbjct: 514 QMMEHG--CTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 569



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 163/357 (45%), Gaps = 32/357 (8%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L ++     +  + +  ++I+   K G  + A +    M  + C PD   Y  VL   
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--- 200
            R + +  A  +  EMV+ NC PN VTF+  I  L + G  E AI ++++M + G     
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422

Query: 201 -----------------------------PNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
                                        PN  TYT +++GLC   R D A  L  +M  
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLH 482

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C P+ V +N L+N FC+   +DEA+ L+    + G  P L +Y+ L DG+ +    ++
Sbjct: 483 RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSED 542

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A      +  + + PDV+ +  +I  LS+  +V++A+++    ++ G+ P    YN ++ 
Sbjct: 543 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILL 602

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           G C    +D A      +     +PN  T+ ILI G+ R G++ +AQ L + +   G
Sbjct: 603 GLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 3/308 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A+    +M
Sbjct: 354 SYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +E  C   V  YNA++N    +     AL ++  M    C PN +T++ L+ GL  + + 
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERL 470

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A +++ EM  R   PN  T+ ++++  CQ    DEA  L  +M + GC+P+ + YN L
Sbjct: 471 DAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTL 530

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            +G  K    ++AL LL      G  P + ++S +I  L +  R +EA   +    +  +
Sbjct: 531 FDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGM 590

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P  ++Y  ++ GL +  ++ +A+  L+ M   G +P+   Y  LI+G    GLL +A+ 
Sbjct: 591 RPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQD 650

Query: 365 LQVEIWKR 372
           L   +  R
Sbjct: 651 LLSMLCSR 658



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 164/392 (41%), Gaps = 57/392 (14%)

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           L   AR +++   +    P+ +  T LI  +CR G   DA ++    E +G    V  +N
Sbjct: 55  LAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYN 114

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNP---TLFLRLSQGGNRVHDKASL---------- 464
            L+ G C+ G L+ A  L   M +  +    T  +R+     RV D  SL          
Sbjct: 115 TLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 174

Query: 465 ------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                   ++E  C      +A  +L ++   G  P+I+TYN +ING C+ G ++ A  L
Sbjct: 175 PNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDL 234

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              L   G +PD+V+Y TL+ GL    R +D   +F +M +  C P+   +  L+ + CR
Sbjct: 235 LNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCR 294

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
                 A  + LQ + +     + ++ +  I    ++G V++A + L  M     +    
Sbjct: 295 GGMVERAIQV-LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTI 353

Query: 637 PYTIWLIG-----------------------------------LCQDGQVKEALNIFSVL 661
            YT  L G                                   LCQ G +++A+ +   +
Sbjct: 354 SYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            E    V   +   L++G C +G++D A+++F
Sbjct: 414 QEHGCTVGVVTYNALVNGFCVQGHIDSALELF 445



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 128/255 (50%), Gaps = 3/255 (1%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +++++    +V    +  L++G+   G  + ALE F  M    C+P+   Y  +L     
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCN 466

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +  EM+  +C PN+VTF++L+N   + G  + AI+++++M + G  PN  T
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +  G+ +   +++A  L   +   G SPD + +++++    K  RV+EA+ +    +
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P+   Y+ ++ GL +    D A  +   M      P+   Y ++I GL+  G +K
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLK 646

Query: 326 DAMKLLSDMRERGIV 340
           +A  LLS +  RG+V
Sbjct: 647 EAQDLLSMLCSRGVV 661



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F VL++ + + G  ++A+E   +M E  C P++  YN + +   +      AL + + +
Sbjct: 491 TFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGL 550

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P+++TFS +I  LSK  + E AI+M       G+ P    Y  ++ GLC+ +  
Sbjct: 551 VSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEI 610

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           D A      M  +GC P+   Y  L+ G  +   + EA  LL      G V +
Sbjct: 611 DNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSK 663


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/613 (26%), Positives = 294/613 (47%), Gaps = 61/613 (9%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVI-SMLLKPNGFDLYWQTLDELRSGNVS 95
           V+ + ++P V + FF WA  +   +  A   AV+ +  +K    +   + L E       
Sbjct: 49  VLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108

Query: 96  VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
               ++  +I+G+ K G  ++A E   +MKE   + DV +++ ++    RK     AL  
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR-----GILPNKFTYTIVI 210
           +  M +  C PN++T++ ++NGL K+ + + A+++ D+M +R     G  P+  +Y+ VI
Sbjct: 169 FKSMGE-ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC+  R D+AY  F +M+  GC+P+ V Y++L++G CK+ R  E L LL   ++ GF 
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             +  ++ ++  L++    ++A  ++ ++ +   +P+VV Y V + GL +AG+V +A ++
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L +M E  + PD   Y+++I GFC  G +D+A  +   +   + +P+  TF  L+ G   
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN------ 444
           +    +A ++   M  AG  P +  +N L+D +C A  +E A  +++KM+  K       
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467

Query: 445 --PTL--------------FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             P +              FL + +  N V + A    +VE  C  G + +A  +L  + 
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527

Query: 489 ESGNLP--------------------------------DIITYNSLINGFCKVGNINGAL 516
           E G  P                                D  TY+  +   CK G  + A+
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAV 587

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           ++ +++ LKG+RPD  TY  ++  L  +DR E A   F +M   GC P    Y  L+  +
Sbjct: 588 EVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEA 647

Query: 577 CRRRKFSLAFSLW 589
           C       AF ++
Sbjct: 648 CSADMADEAFRIF 660



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 231/509 (45%), Gaps = 55/509 (10%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G   N +T  ++++   +  R +EA+RL  +  +  C P+ + Y  ++NGFCK  +VD+A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             LL   ++ G    +  +S LI GL R  R DEA   ++ M EE   P+V+ Y  ++ G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNG 189

Query: 318 LSEAGKVKDAMKLLSDMRER-----GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           L +A ++ +A++L  DM +R     G  PD   Y+ +I   C    +D+A      +   
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN  T++ LI G+C+     +  +L   M++ G   ++  FNA++  L K  E EKA
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309

Query: 433 NLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
              F + ++ GK P +               +    V   C AG + +AY+IL+++ ES 
Sbjct: 310 CQFFERLLKSGKKPNV--------------VTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD+ITY+S+I+GFCK G ++ A  +F  + +    P  VT+ TL++G     +  +AF
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           R+   M   G  P    Y  LM   C                    G D           
Sbjct: 416 RVHEDMVNAGFIPGLQTYNVLMDCVC--------------------GADS---------- 445

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
               VE+A++   +M  K        Y   +  LC+  +V EA     V+     +    
Sbjct: 446 ----VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            C  L+  LCK+G +D A  V    ++ G
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVG 530



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 255/540 (47%), Gaps = 64/540 (11%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  T ++L+N   K+ + E A ++L E  +    PN+  YT VI+G C+  + D+A+ L 
Sbjct: 75  NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +MK+ G   D + ++ L+ G C+  R+DEAL   +S  ++   P + +Y+ +++GL +A
Sbjct: 135 DEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKA 193

Query: 287 KRYDEAYAWYRKM-----FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            R DEA   +  M          EPDV+ Y  +I  L +A +V  A +    MR  G  P
Sbjct: 194 NRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAP 253

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVE-------------------IWKRDSL------- 375
           +   Y++LI G C +    +   L +                    +WK D         
Sbjct: 254 NVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 313

Query: 376 ---------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
                    PN  T+ + + G+C+ G VD+A ++  +M ++   P V  ++++IDG CKA
Sbjct: 314 ERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKA 373

Query: 427 GELEKANLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           G ++KA+ +F +M + +   +P  F+ L  G +  H K+                +A+++
Sbjct: 374 GRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE-HKKS---------------REAFRV 417

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              +  +G +P + TYN L++  C   ++  AL+++ +++ K  +PD  TY  LI  L R
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             R ++A      M  +   P+ A+  +L+   C++ +   A S+    +        E+
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537

Query: 604 MKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            K  +EE   + + E A + L    F  +    A Y++ +  +C+ G+  EA+ +   +V
Sbjct: 538 FKILVEELYLRKKWEAASKLLRSPGFVAD---AATYSLCVAEICKAGKPDEAVEVIEQMV 594



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 30/372 (8%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N +T  +L+    +    ++A +L  +  +  CFP+  M+  +I+G CKAG++++A  L 
Sbjct: 75  NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M E G    + L                T+++  C  G I +A +    + E  + P+
Sbjct: 135 DEMKERGVKMDVLLH--------------STLIQGLCRKGRIDEALEQFKSMGEECS-PN 179

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLK-----GLRPDSVTYGTLINGLQRVDREEDA 550
           +ITYN+++NG CK   I+ AL+LF +++ +     G  PD ++Y T+I+ L +  R + A
Sbjct: 180 VITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKA 239

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           +  F +M   GC P+   Y SL+   C+  + S    L L       G +     ++   
Sbjct: 240 YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHA 299

Query: 611 LQKG-EVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           L K  E E A Q    LL+   K N   +  Y + + GLC+ G+V EA  I   +VE K 
Sbjct: 300 LWKNDEQEKACQFFERLLKSGKKPN---VVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
                +   +I G CK G +D A DVF   + +  I  P     LL    FS+  K   A
Sbjct: 357 TPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG--FSEHKKSREA 414

Query: 727 YHLLCRMKSVGY 738
           + +   M + G+
Sbjct: 415 FRVHEDMVNAGF 426



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 33/371 (8%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L+SG    V   + V + G  K G  ++A     +M E    PDV  Y+++++   +   
Sbjct: 317 LKSGKKPNVV-TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 375

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  V+  M+   C+P+ VTF  L++G S+  K+  A ++ ++M   G +P   TY +
Sbjct: 376 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 435

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++  +C  +  + A  ++ KMK     PD   Y  L+   C+ RRVDEA   L   E D 
Sbjct: 436 LMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADN 495

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP---------------------- 306
            VP       L++ L +    DEA +    + E   +P                      
Sbjct: 496 VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAAS 555

Query: 307 ----------DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
                     D   Y + +  + +AGK  +A++++  M  +G+ PD   Y A+++  C L
Sbjct: 556 KLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGL 615

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             ++ A +   ++  R   P   T+T+LI   C   M D+A ++F  M  AG  P     
Sbjct: 616 DRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTM 675

Query: 417 NALIDGLCKAG 427
             L   L  AG
Sbjct: 676 RTLSSCLRDAG 686



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 11/291 (3%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC-------EKALESFGKMKEFDC 129
           +GF  + ++ +  R  +  +V+  F   +  Y  + DC       E ALE + KMK    
Sbjct: 403 HGFSEHKKSREAFRV-HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 461

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           QPD   Y  ++    R +    A      M   N +PN      L+  L K G+ + A  
Sbjct: 462 QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 521

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +LD + + G  P   T+ I++  L    + + A +L   ++  G   D   Y+  +   C
Sbjct: 522 VLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEIC 578

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  + DEA+ ++      G  P  G+Y  ++  L    R + A A + KM      P +V
Sbjct: 579 KAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLV 638

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            Y ++I     A    +A ++   M   G  P       L     D G  D
Sbjct: 639 TYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 689


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 258/487 (52%), Gaps = 23/487 (4%)

Query: 77  NGFDLY--WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           N  DL+   + L+E++S   +  +     +I+     GD + A++    ++   C P+V 
Sbjct: 2   NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVV 58

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y A++    R +    A+ +  EM +  C PN+VT+++L++ L K      A  ++ +M
Sbjct: 59  TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G  PN  T+  ++ G C+    D+A +L   M   G  P+ V Y+AL++G CK ++ 
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            EA  +L   +  G  P   +YS LI GL +A + +EA    R+M      PDVV+Y  +
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-D 373
           I    ++GK+ +A K L +MR++   PD   YN +I G C LG + +A+ +  ++ +  D
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LP+  T++ +I G+C++ M+ +AQKL ++M KAGC P V  +  +IDGLCK G LE+A 
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358

Query: 434 LLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            L   M+  G  P +               +  T++   C A  + +A +++ ++  +G 
Sbjct: 359 YLLQGMKRAGCAPNVV--------------TYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQ--LKGLRPDSVTYGTLINGLQRVDREEDA 550
            P+++TYN+++NG C  G I  A +L + ++       PD+ TY T++N L   D  ++A
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 551 FRIFGQM 557
            ++  QM
Sbjct: 465 EQLLEQM 471



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 253/467 (54%), Gaps = 21/467 (4%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            GD   ALE   +MK     PD + +  ++           A+     +  + C PN+VT
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVT 59

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI   +++ K E A+K+L+EM +RG  PN  TY +++  LC+++    A  +  KM 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           + G +P+ + +N+L++GFCK   VD+A  LL      G  P + +YS LIDGL +++++ 
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA     +M    + PD   Y  +I GL +A K+++A ++L  M   G  PD   Y+++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-C 409
             FC  G L +A+    E+ K+   P+  T+  +I G+C+ G + +AQ + ++M+++G  
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P V  ++ +I+GLCK+  L +A  L  +M + G NP              D  +  T++
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP--------------DVVTYTTII 345

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C  G + +A  +L  +  +G  P+++TY +LI+G CK   ++ A ++ +E++  G  
Sbjct: 346 DGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMP--QNGCTPSPAVYKSLM 573
           P+ VTY T++NGL    R ++A ++  +M   +  C+P  A Y++++
Sbjct: 406 PNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIV 452



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 249/479 (51%), Gaps = 23/479 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL +  EM      P+  T + +I  ++ +G  + A   +D +   G  PN  TYT +I+
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 65

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              +  + +EA +L  +M++ GC P+ V YN L++  CKL  V  A  +++   + GF P
Sbjct: 66  AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ L+DG  +    D+A      M  + + P+VV Y  +I GL ++ K  +A ++L
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M+  G+ PD + Y+ALI G C    +++A  +   +      P+   ++ +I   C++
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 245

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G + +AQK   +M K    P V  +N +IDGLCK G++ +A ++  +M+           
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ----------- 294

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            + G+ + D  +  T++   C + ++ +A K+L ++ ++G  PD++TY ++I+G CK G 
Sbjct: 295 -ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A  L + ++  G  P+ VTY TLI+GL +  + ++A R+  +M   GC P+   Y +
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGR-----DDESMKSIEEFLQKGEVENAIQGLLE 625
           ++   C   +   A  L +Q ++D  GR     D  + ++I   L   ++    + LLE
Sbjct: 414 MVNGLCVSGRIKEAQQL-VQRMKD--GRAECSPDAATYRTIVNALMSSDLVQEAEQLLE 469



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 240/493 (48%), Gaps = 51/493 (10%)

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G    A+++L+EM   G  P+ FT+T +I+ +      D A      M   GC P+ V 
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y AL+  F + ++++EA+ LL    + G  P L +Y+ L+D L +      A    +KM 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E    P+V+ +  ++ G  + G V DA KLL  M  +G+ P+   Y+ALI G C      
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A+ +  E+      P+  T++ LI G+C+   +++A+++  +M  +GC P V +++++I
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
              CK+G+L +A     +M   +             +  D  +  T+++  C  G I +A
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQR-------------KSPDVVTYNTVIDGLCKLGKIAEA 286

Query: 481 YKILMQLAESGN-LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
             IL Q+ ESG+ LPD++TY+++ING CK   +  A KL   +   G  PD VTY T+I+
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 346

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL +  R E+A  +   M + GC P+   Y +L++  C+ RK                  
Sbjct: 347 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV----------------- 389

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            DE+ + +EE    G   N                L  Y   + GLC  G++KEA  +  
Sbjct: 390 -DEAERVMEEMRNAGCPPN----------------LVTYNTMVNGLCVSGRIKEAQQLVQ 432

Query: 660 VLVECKAIVTPPS 672
            + + +A  +P +
Sbjct: 433 RMKDGRAECSPDA 445



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 224/422 (53%), Gaps = 12/422 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+   +    +   + L+E+R          + VL+    K+     A +   KM E
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  +N++++   ++     A  +   MV     PN+VT+S LI+GL KS K   
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L+EM   G+ P+ FTY+ +I GLC+ ++ +EA ++  +M  SGC+PD V Y+++++
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIE 305
            FCK  ++ EA   L+   K    P + +Y+ +IDGL +  +  EA     +M E   + 
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVV Y  +I GL ++  + +A KLL  M + G  PD   Y  +I G C  G L++A  L
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              + +    PN  T+T LI G+C+   VD+A+++  +M  AGC P++  +N +++GLC 
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCV 420

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           +G +++A  L  +M+ G+                D A+ +T+V    ++ L+ +A ++L 
Sbjct: 421 SGRIKEAQQLVQRMKDGR-----------AECSPDAATYRTIVNALMSSDLVQEAEQLLE 469

Query: 486 QL 487
           Q+
Sbjct: 470 QM 471



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 187/418 (44%), Gaps = 37/418 (8%)

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C+ G L  A  L  E+      P+  T T +I  M   G +D A      M   GC P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             + ALI    +A +LE+A  L  +M E G  P L               +   +V+  C
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV--------------TYNVLVDALC 103

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
              ++  A  ++ ++ E G  P+++T+NSL++GFCK GN++ A KL   +  KG+RP+ V
Sbjct: 104 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  LI+GL +  +  +A  +  +M  +G TP    Y +L+   C+  K   A     Q 
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAE----QM 219

Query: 593 LRDISGRD---DESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           LR ++G     D  + S  I  F + G++  A + L EM  +     +  Y   + GLC+
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
            G++ EA  I   + E   ++  P  V    +I+GLCK   L  A  +     K G    
Sbjct: 280 LGKIAEAQVILDQMQESGDVL--PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG--CN 335

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
           P V  Y        K  +   A +LL  MK  G   +   Y    +L+ G    R+++
Sbjct: 336 PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTY---TTLISGLCKARKVD 390


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 175/587 (29%), Positives = 282/587 (48%), Gaps = 41/587 (6%)

Query: 57  RKRLRSFASNSAVISMLL------KPNGFDLYWQTLDELR-------------SGNVSVV 97
           R   R  AS   ++S LL      +P  FDL  +T  + R                V V 
Sbjct: 62  RMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVP 121

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +     L++   + G    A E++  +   D + + Y  N +++   +   F  A  V  
Sbjct: 122 ASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVIS 181

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM K    P++VT ++LI+   ++G  + AI ++D M  RG+ P   TY  V+ GLC+  
Sbjct: 182 EMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR 241

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R D+A  +F  M     +PD  ++N L+ GFC++  V EA+   +  +     P + S+S
Sbjct: 242 RFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFS 301

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           CLI    R    D A A+ R+M    + PD V+Y ++I G   AG + +A+++  +M   
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G +PD   YN L+ G C    L  A  L  E+ +R   P+  TFT LI G CR G  ++A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG 454
            +LF+ + +    P V  +N+LIDG+C+ G+L KAN L+  M   EI  N   +  L   
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481

Query: 455 G---NRVHD----------KASL------QTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
                +V D          K +L       ++++ YC +G + K  + L ++ +    PD
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +IT+N+LI+G+ K  N++GA  +F  ++ + +RPD+VTY  +ING       +DA R+F 
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFK 601

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
            M  +G  P    Y SL+           AF L  + +      DD+
Sbjct: 602 GMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 240/551 (43%), Gaps = 26/551 (4%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN-----GFCKLRRVD 255
           P    + ++I    Q  +  EA+  F  + D        A NALL      G+  L +  
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
             L L    E + +     + + ++    +   +D A     +M +  + PDVV + V+I
Sbjct: 145 YRLVLSSDSEVNAY-----TLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLI 199

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
                AG V  A+ L+  M  RG+ P    YN+++KG C     D+A+ +   + +    
Sbjct: 200 DARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  +F ILI G CR G V +A K + +M+     P V  F+ LI    + GE++ A   
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA- 318

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
                       +LR  +G   V D      ++  +C AG + +A ++  ++   G LPD
Sbjct: 319 ------------YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+L+NG CK   +  A KL  E++ +G+ PD  T+ TLI+G  R    E+A ++F 
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKG 614
            + +    P    Y SL+   CR+   + A  LW   + R+I          I+   +KG
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +VE+A   L EM  K N   +  Y   + G C+ G VK+       + +        +  
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            LIHG  K   +  A +VF    K   ++RP    Y +    FS+      A  +   M 
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKE--MVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG 604

Query: 735 SVGYDLDACLY 745
             G + D   Y
Sbjct: 605 DSGIEPDRYTY 615


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 189/735 (25%), Positives = 326/735 (44%), Gaps = 66/735 (8%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG- 92
           V +V+ + K+P      F    K KR   F  +      +++  GF   +  ++ + +  
Sbjct: 10  VAAVLKQQKDPLKALEMF---NKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAET 66

Query: 93  ----NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
               + S++  V+   +  Y + G  ++A++ F +M  ++C+P V  YNA++NI      
Sbjct: 67  RMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGY 126

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F  A  V+  M  +  +P++ TF++ I    ++ +   A+++L+ M  +G   N   Y  
Sbjct: 127 FKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCT 186

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           V++G  + N   EAY LF  M   G  PD   +N LL+  CK   V E+  LL    K G
Sbjct: 187 VVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               L +++  I GL R      A +    +  E + PDVV Y  +I GL +   V +A 
Sbjct: 247 MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K L  +   G+ PD + YN LI G+C +G+L  A  +      +  +P+  T+  LI G+
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+N  +D A  LFN     G  P+V ++N LI GLC+ G + +A  +  +M         
Sbjct: 367 CQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEM--------- 417

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
              S+ G    D  +   ++   C  G +  A  ++      G +PD+ T+N+LI+G+CK
Sbjct: 418 ---SENGCS-SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCK 473

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              +   +++  ++   G+ PD +TY +++NGL +  + ED    F  M + GC P+   
Sbjct: 474 QLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKIT 533

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM- 626
           Y  L    C+  K + A  L  + L      D  S  + I  F   G+++ A Q    M 
Sbjct: 534 YNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMG 593

Query: 627 ------------DFKLNDFQ-------------------LAP----YTIWLIGLCQDGQV 651
                       +  +N F                     AP    Y + + G C  G  
Sbjct: 594 EQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
                    ++E   I +  +  ++I+ LC +  +  A+D+  + + NG +  P V N +
Sbjct: 654 DSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIV--PEVVNSI 711

Query: 712 LRSLLFSKDNKKVHA 726
                 S+ +KKV A
Sbjct: 712 ------SEADKKVVA 720



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 131/323 (40%), Gaps = 59/323 (18%)

Query: 97  VSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           V DVF    LI GY K    E  ++   KM      PDV  YN+VLN   +       + 
Sbjct: 458 VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLME 517

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
            +  MV+  C+PN +T+++L   L K+GK   A+ ++DE+  +GI P+  ++  +ISG  
Sbjct: 518 TFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577

Query: 215 Q----------INRADEAYR--------------------------LFLKMKDSGCSPDF 238
                        R  E Y+                          LFL+M   GC+PD 
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             Y  +++GFC     D     L    + GF+P L ++  +I+ L    R  EA      
Sbjct: 638 YTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHF 697

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           M    I P+VV        +SEA K  V     ++ D+ +R  +   Y Y  L  G  D 
Sbjct: 698 MVHNGIVPEVV------NSISEADKKVVAAPKIVVEDLLKRSCIT-YYAYELLYDGIRD- 749

Query: 357 GLLDQARSLQVEIWKRDSLPNTH 379
                      +  ++  LPN H
Sbjct: 750 -----------KKTQKQKLPNRH 761


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 159/581 (27%), Positives = 283/581 (48%), Gaps = 59/581 (10%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-CLPNIVTFSLLINGLSKS 181
           +M E  C PD + YN V+           AL +   M K + C P++V+++++I+GL   
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFME 285

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+   A  + +EM Q+G++PN  TY  ++  LC+    D+A  +  +M D+   PD V Y
Sbjct: 286 GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTY 345

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            A+++G+  L R  EA  + +   ++G +P + +++ L+D L + KR  EA   +  +  
Sbjct: 346 TAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIAT 405

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +  +PD++ Y +++ G +  G+  D   L   M + GIV D++C+N LI      G++D+
Sbjct: 406 KGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDE 465

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +  E+  +   PN  T+  +I  +CR G + DA +  ++M   G  P+  ++++LI 
Sbjct: 466 ALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQ 525

Query: 422 GLCKAGELEKANLLFYK-MEIG---KNPTLFLRLSQG--------------------GNR 457
           G C  G+L KA  L  + M+ G    N T F  +                       G+R
Sbjct: 526 GFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDR 585

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  ++++ YC  G + KA+ +L  +  +G  PD++TY++LING+ K G I+  L 
Sbjct: 586 P-DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+E+  K ++P +VTY  +++GL R  R   A ++F +M ++G   S + Y  ++   C
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704

Query: 578 RRR-----------------KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           R                   KF +A    + +      R +E+          G V NA 
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNA- 763

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                          + Y + +I L ++G V+EA  +FS +
Sbjct: 764 ---------------STYGVMIINLLKEGSVEEADIMFSSM 789



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 161/638 (25%), Positives = 269/638 (42%), Gaps = 96/638 (15%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML- 191
           V+ Y  +++   R +   L  A +  +++     + +  +  +  L  + +T+ A+ ML 
Sbjct: 165 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLL 224

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCK 250
             M++ G +P+ F+Y  VI  LC  +R+ EA  + L+M K  GCSPD V+Y  +++G   
Sbjct: 225 HRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFM 284

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              + +A  L     + G VP + +Y+ ++  L +A+  D+A    R+MF+  I+PD V 
Sbjct: 285 EGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  MI G S  G+ K+A K+  +M   G++PD   +N+L+   C      +A  +   I 
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404

Query: 371 KRDSLP-----------------------------------NTHTFTILICGMCRNGMVD 395
            +   P                                   ++H F ILI    + GM+D
Sbjct: 405 TKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD 464

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP--TLFLRLS 452
           +A  +F +M   G  P+V  +  +I  LC+ G L  A     +M  IG  P   ++  L 
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLI 524

Query: 453 QG----GNRVHDKASLQTMVEQ----------------YCTAGLIHKAYKILMQLAESGN 492
           QG    G+ +  K  +  M++Q                 C  G +  A  +   +   G+
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDI T+NSLI+G+C VG ++ A  +   +   G  PD VTY TLING  +  R +D   
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +F +M      P+   Y  ++    R                  +GR   + K   E ++
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFR------------------AGRTSAAKKMFHEMIE 686

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G                    ++ YTI L GLC++    EA+ +F  L           
Sbjct: 687 SGTA----------------MSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAI 730

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              +IH L K    + A D+F     +G +  P    Y
Sbjct: 731 LNTMIHALYKVKRREEAHDLFASVSASGLV--PNASTY 766



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 231/501 (46%), Gaps = 16/501 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  L K    D     L ++   ++      +  +I GY  +G  ++A + F +M  
Sbjct: 311 NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD+  +N++++   + +    A  +++ +      P+I+++S+L++G +  G+   
Sbjct: 371 EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVD 430

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +   MT  GI+ +   + I+I+   +    DEA  +F +M+  G SP+ V Y  ++ 
Sbjct: 431 MNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIA 490

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-E 305
             C++ R+ +A+  L      G  P    Y  LI G        +A     +M ++ I  
Sbjct: 491 ALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPR 550

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P++  +  +I  L   G+V +A  + + +   G  PD + +N+LI G+C +G +D+A  +
Sbjct: 551 PNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGV 610

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +    + P+  T++ LI G  ++G +DD   LF +M      P+   ++ ++DGL +
Sbjct: 611 LDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFR 670

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           AG    A  +F++M E G   ++              ++   +++  C      +A  + 
Sbjct: 671 AGRTSAAKKMFHEMIESGTAMSI--------------STYTIILQGLCRNNCTDEAITLF 716

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            +L       +I   N++I+   KV     A  LF  +   GL P++ TYG +I  L + 
Sbjct: 717 HKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKE 776

Query: 545 DREEDAFRIFGQMPQNGCTPS 565
              E+A  +F  M + GC PS
Sbjct: 777 GSVEEADIMFSSMEKTGCAPS 797


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 179/704 (25%), Positives = 316/704 (44%), Gaps = 62/704 (8%)

Query: 23  EPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPNGFDL 81
            PL P  S + +  ++ +  +       F WA+ +    +  S    ++  L +   FD 
Sbjct: 51  HPLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDS 110

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAV 139
               L ++ S  + V    F + +  Y         +     +  ++F  +PD   YN  
Sbjct: 111 MLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVA 170

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           L++  +     L   ++ +MV     P++ TF++LI  L K+ +   AI ML++M   G+
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            P++ T+T ++ G  +    + A R+   M +SGC    V+ N L+NG CK  R++EAL 
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
            +  +E++GF P   +++ L++GL R     +       M E+  E DV  Y  +I GL 
Sbjct: 291 FI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G++ +A+++L  M  R   P+T  YN LI   C    ++ A  L   +  +  LP+  
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           TF  LI G+C     + A +LF +M++ GC P    ++ LI+ LC    L++A +L  +M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 440 EI---GKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLI 477
           E+    +N  ++  L  G    NRV D   +                 T++   C +  +
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A +++ Q+   G  PD  TY +++  FC+ G+I  A  + + + L G  PD VTYGTL
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I GL +  R + A ++   +   G   +P  Y  ++   C+R+                 
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRK----------------- 631

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALN 656
            R  E+M+   E ++KG+  + I                 Y I   GLC   G ++EA++
Sbjct: 632 -RTKEAMRLFREMMEKGDPPDVIT----------------YKIVFRGLCNGGGPIQEAVD 674

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
               ++E   +   PS   L  GLC     D  + +    ++ G
Sbjct: 675 FTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 220/460 (47%), Gaps = 18/460 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G  ++ LE    M E   + DVY YN++++   +      A+ + + M
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  +C PN VT++ LI  L K    E A ++   +T +G+LP+  T+  +I GLC  +  
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  LF +MK+ GC PD   Y+ L+   C  RR+ EAL LL+  E  G    +  Y+ L
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +  R  +A   + +M    +    V Y  +I GL ++ +V++A +L+  M   G+
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y  ++K FC  G + +A  +   +      P+  T+  LI G+C+ G VD A K
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L   ++  G   +   +N +I  LCK    ++A  LF +M E G  P             
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPP------------- 650

Query: 459 HDKASLQTMVEQYCTAG-LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
            D  + + +    C  G  I +A    +++ E G LP+  ++  L  G C +   +  ++
Sbjct: 651 -DVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQ 709

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           L   +  KG    S T  ++I G  ++ +  DA    G +
Sbjct: 710 LINMVMEKGRFSQSET--SIIRGFLKIQKFNDALANLGAI 747



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 247/581 (42%), Gaps = 59/581 (10%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFL 227
           TF + +   + S      I  L  + +R   + P+   Y + +S L + N+      L  
Sbjct: 129 TFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHS 188

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           KM      PD   +N L+   CK  ++  A+ +L      G  P   +++ L+ G     
Sbjct: 189 KMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEA 248

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             + A      M E   E   V   V++ GL + G++++A++ + +  E G  PD   +N
Sbjct: 249 DVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFN 306

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           AL+ G C  G + Q   +   + ++    + +T+  LI G+C+ G +D+A ++ + M   
Sbjct: 307 ALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR 366

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
            C P+   +N LI  LCK   +E A             T   R+      + D  +  ++
Sbjct: 367 DCEPNTVTYNTLIGTLCKENHVEAA-------------TELARVLTSKGVLPDVCTFNSL 413

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C       A ++  ++ E G  PD  TY+ LI   C    +  AL L KE++L G 
Sbjct: 414 IQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGC 473

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
             + V Y TLI+GL + +R  DA  IF QM   G + S   Y +L+   C+         
Sbjct: 474 ARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK--------- 524

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                    S R +E+ + +++ + +G              K + F    YT  L   CQ
Sbjct: 525 ---------SKRVEEAAQLMDQMIMEG-------------LKPDKFT---YTTMLKYFCQ 559

Query: 648 DGQVKEALNIFS--VLVECKA-IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
            G +K A +I     L  C+  IVT  +   LI GLCK G +D+A  +       G +L 
Sbjct: 560 QGDIKRAADIVQNMTLNGCEPDIVTYGT---LIGGLCKAGRVDVASKLLRSVQMKGMVLT 616

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           P+  N ++++L   K  K+  A  L   M   G   D   Y
Sbjct: 617 PQAYNPVIQALCKRKRTKE--AMRLFREMMEKGDPPDVITY 655



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 1/345 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K N  +   +    L S  V      F  LI G     + E A+E F +MKE
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD + Y+ ++     ++    AL +  EM    C  N+V ++ LI+GL K+ +   
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD 495

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + D+M   G+  +  TY  +I+GLC+  R +EA +L  +M   G  PD   Y  +L 
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC+   +  A  ++++   +G  P + +Y  LI GL +A R D A    R +  + +  
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL 615

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD-LGLLDQARSL 365
               Y  +I+ L +  + K+AM+L  +M E+G  PD   Y  + +G C+  G + +A   
Sbjct: 616 TPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDF 675

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            VE+ ++  LP   +F  L  G+C   M D   +L N + + G F
Sbjct: 676 TVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRF 720


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 261/524 (49%), Gaps = 13/524 (2%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            K + L S    + ++S + K   FDL     ++++   +S     + +LI+ + +    
Sbjct: 2   VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL   GKM +   +P +   +++LN     +    A+A+  +MV++   P+ +TF+ L
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL    K   A+ ++D M QRG  PN  TY +V++GLC+    D A+ L  KM+ +  
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D V +N +++  CK R VD+AL L +  E  G  P + +YS LI  L    R+ +A  
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M E+KI P++V +  +I    + GK  +A KL  DM +R I PD + YN+LI GFC
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               LD+A+ +   +  +D  P+  T+  LI G C++  V+D  +LF +M   G      
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  LI GL   G+ + A  +F +M     P              D  +   +++  C  
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-------------DIMTYSILLDGLCNN 408

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + KA ++   + +S    DI  Y ++I G CK G ++    LF  L LKG++P+ VTY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            T+I+GL      ++A+ +  +M ++G  P    Y +L+    R
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 258/525 (49%), Gaps = 27/525 (5%)

Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L +  KMK+FD                ++Y YN ++N   R+    LALA+  +M+KL
Sbjct: 15  KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+IVT S L+NG     +   A+ ++D+M + G  P+  T+T +I GL   N+A EA
Sbjct: 75  GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   GC P+ V Y  ++NG CK   +D A  LL   E       +  ++ +ID 
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + +  D+A   +++M  + I P+VV Y  +I  L   G+  DA +LLSDM E+ I P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +NALI  F   G   +A  L  ++ KR   P+  T+  LI G C +  +D A+++F 
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M    CFP +  +N LI G CK+  +E    LF +M            S  G  V D  
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM------------SHRG-LVGDTV 361

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+++     G    A K+  Q+   G  PDI+TY+ L++G C  G +  AL++F  +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           Q   ++ D   Y T+I G+ +  + +D + +F  +   G  P+   Y ++++  C +R  
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
             A++L  +   D    D  +  + I   L+ G+   + + + EM
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 278/588 (47%), Gaps = 57/588 (9%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MVK   LP+I  F+ L++ ++K  K ++ I + ++M + GI  N +TY I+I+  C+ ++
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A  L  KM   G  P  V  ++LLNG+C  +R+ +A+AL+    + G+ P   +++ 
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GLF   +  EA A   +M +   +P++V YGV++ GL + G +  A  LL+ M    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I  D   +N +I   C    +D A +L  E+  +   PN  T++ LI  +C  G   DA 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           +L + M +    P++  FNALID   K G+  +A  L   M +   +P +F         
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF--------- 291

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                +  +++  +C    + KA ++   +      PD+ TYN+LI GFCK   +    +
Sbjct: 292 -----TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+E+  +GL  D+VTY TLI GL      ++A ++F QM  +G  P    Y  L+   C
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
              K   A  ++                   +++QK E++                 +  
Sbjct: 407 NNGKLEKALEVF-------------------DYMQKSEIK---------------LDIYI 432

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFL 694
           YT  + G+C+ G+V +  ++F  L   K +   P+ V    +I GLC +  L  A  +  
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQEAYALLK 489

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
              ++G +      N L+R+ L  +D  K  +  L+  M+S  +  DA
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 535



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 197/397 (49%), Gaps = 8/397 (2%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL +  L+++ +  +     +F  +I    K    + AL  F +M+  
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +P+V  Y+++++       +  A  +  +M++    PN+VTF+ LI+   K GK   A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ D+M +R I P+ FTY  +I+G C  +R D+A ++F  M    C PD   YN L+ G
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV++   L R     G V    +Y+ LI GLF     D A   +++M  + + PD
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y +++ GL   GK++ A+++   M++  I  D Y Y  +I+G C  G +D    L  
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN  T+  +I G+C   ++ +A  L  KM++ G  P  G +N LI    + G
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514

Query: 428 ELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
           +   +  L  +M     +G   T+ L      N +HD
Sbjct: 515 DKAASAELIREMRSCRFVGDASTIGLV----ANMLHD 547



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G   F   + R  +    + + +I  L      D   +   ++ S  V     
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G    G  EKALE F  M++ + + D+YIY                       
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 433

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                       + +I G+ K+GK +    +   ++ +G+ PN  TY  +ISGLC     
Sbjct: 434 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
            EAY L  KMK+ G  PD   YN L+     LR  D+A +  L+R      FV    +  
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 539

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 540 -LVANMLHDGRLDKSF 554


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 200/724 (27%), Positives = 340/724 (46%), Gaps = 58/724 (8%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR 61
           +STL+   T  + +T    +   L P  + T +   + + ++       F WA+K+   +
Sbjct: 27  NSTLSFATTNHEPLTTTTNSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFK 86

Query: 62  SFASN-SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
             +S    V+  L K   FD     L E++     + +D   V I  Y   G   + L+ 
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQF 146

Query: 121 FGKMK-EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
              M+ EF    + + YN +LN+        L    +  MV     P++ TF++LI  L 
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           ++ +   AI +++EM   G+LP++ T+T ++ G  +    D A R+  +M ++GC    V
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
             N L+NGFCK  R++EAL  +                 L +G F               
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMS-------------LREGFF--------------- 298

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                 PD   + +++ GLS+ G VK A++++  M   G  PD Y YN+LI G C LG +
Sbjct: 299 ------PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D+A  +  ++ +RD  PNT T+  +I  +C+   V++A KL   +   G  P V  +N+L
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412

Query: 420 IDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I GLC +     A  L+ +M+  G +P              D+ +   +++  C  G + 
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHP--------------DEFTYNMLIDSLCFRGKLQ 458

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A  +L ++  SG   ++ITYN+LI+GFCK   I  A ++F +++L+G+  +SVTY TLI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +GL + +R E+A ++  QM   G  P    Y SL+T+ C+      A  +      D   
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            D  +  + I    + G VE A + L  +  K  +     Y   +  L +  + KEA+ +
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638

Query: 658 FSVLVECKAIVTPPSCVKLI-HGLCKRGY-LDLAMDVFLYTLKNGFILRPRVCN-YLLRS 714
           F  ++E KA        K++  GLC+ G  +  A+D  +  L+ G++  P   + Y+L  
Sbjct: 639 FREMIE-KAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYV--PEFSSFYMLAE 695

Query: 715 LLFS 718
            LFS
Sbjct: 696 GLFS 699



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 199/452 (44%), Gaps = 49/452 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LISG  K+G+ ++A++   +M E DC P+   YN +++   ++     A  +   +    
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LP++ T++ LI GL  S    VA+++  EM  +G  P++FTY ++I  LC   +  EA 
Sbjct: 402 ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M+ SGC+ + + YN L++GFCK +R+ EA  +    E  G      +Y+ LIDGL
Sbjct: 462 NLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +++R +EA     +M  E + PD   Y  ++    +AG +K A  ++  M   G  PD 
Sbjct: 522 CKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDI 581

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  LI G C  G ++ A  L   I  +      H +  +I  + R     +A +LF +
Sbjct: 582 VTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M +    P    +  +  GLC+ G                                    
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGG------------------------------------ 665

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
                      G I +A   +M++ E G +P+  ++  L  G   +  +   +KL   + 
Sbjct: 666 -----------GPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVM 714

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            K    D+    T+I G  ++ + +DA    G
Sbjct: 715 EKAKFSDNEV--TMIRGFLKISKYQDALATLG 744


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 270/521 (51%), Gaps = 30/521 (5%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + L+NGL K+G+ + A+ +LDEM      P+   +T+VI+GLC+  R DEA+ +  +   
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           +GC PD+V YN  ++G CK  RVD+A  LL+  ++   +P   +Y+ L+DGL +A R DE
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A A   +M E+   P +  Y V+I GLS+AG+V++A ++  DM   G  PD + Y ALI 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 352 GFCDLGLLDQARSLQVEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           G   +G LD+A     ++ +    R   P+     ++I  +C +G ++DA   F++++ +
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS 249

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASLQT 466
                   FN L+  LCKA   E+A     KM   +  PTLF              +  +
Sbjct: 250 LDLTHF-TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF--------------TYTS 294

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +V+ +   G + +A   L +  E G +PD +TY S+I+G CK+G +    + F E++ +G
Sbjct: 295 LVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRG 354

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             PD+VTY  LI+G  +      A R++ QM Q+G   S   Y  ++   C+  + + A+
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 414

Query: 587 SLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
           + +L    R            ++ F  +G V  A++    M  +  +  L  Y I + GL
Sbjct: 415 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474

Query: 646 CQDGQVKEALNIFSVLVE---CKAIVTPPSCVKLIHGLCKR 683
           C+ G++ +A   F  L++   C  + T  S    +HGLC+R
Sbjct: 475 CRAGKLAKAYFYFEKLLQRRLCPDVYTFNS---FLHGLCQR 512



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 278/564 (49%), Gaps = 35/564 (6%)

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           ++ C P++V F+++INGL +  + + A  +L+   + G  P+  TY + I GLC+  R D
Sbjct: 34  EMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVD 93

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A++L  KM +  C P  V Y AL++G  K  R+DEA+A+L    + G  P L +Y+ +I
Sbjct: 94  DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVI 153

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE---- 336
           DGL +A R +EA   +  M      PD  +Y  +I GL++ GK+ +A+  L+ M E    
Sbjct: 154 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCA 213

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH-TFTILICGMCRNGMVD 395
           RG+ PD   +N +I+  C  G L+ A +   E+   DSL  TH TF  L+  +C+    +
Sbjct: 214 RGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL--DDSLDLTHFTFNPLVAALCKAERTE 271

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL-LFYKMEIGKNPTLFL----- 449
           +A     KM +  CFP++  + +L+DG  K G L++A L L   +E G  P         
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331

Query: 450 -------RLSQGGNRVH---------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                  R+ +G  R H         D  +   +++ +  A +I KA+++  Q+ +SG +
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
              +TYN +++G CK G +  A   F  ++ +G     VTY  L++G         A  +
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F +M   GC P+   Y  ++   CR  K + A+  + + L+     D  +  S    L +
Sbjct: 452 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ 511

Query: 614 --GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
               V + ++    M  +     L  Y+I + G+C+ G ++  L IF  +V     V P 
Sbjct: 512 RLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMV--SRGVAPD 569

Query: 672 SCV--KLIHGLCKRGYLDLAMDVF 693
             V   LI  LC  G +D A++VF
Sbjct: 570 VVVFNTLIRWLCIAGRVDEALEVF 593



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 281/587 (47%), Gaps = 33/587 (5%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           L+E  ++L+    +    EP   +++       + K +     F+      ++K L +  
Sbjct: 57  LDEAFSVLERA--VRAGCEP--DYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 112

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + +A++  LLK    D     L+++     S     + V+I G  K G  E+A   F  M
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL----PNIVTFSLLINGLSK 180
               C+PD ++Y A+++   +      AL    +MV+  C     P++V  +L+I  L  
Sbjct: 173 LGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           SG  E A+   DE+     L + FT+  +++ LC+  R +EA     KM +  C P    
Sbjct: 233 SGNLEDALAYFDELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFT 291

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y +L++GF KL R+DEAL  L+   + GF+P   +Y+ +IDGL +  R +E    + +M 
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
               EPD V Y  +I G  +A  +  A ++   M + G V  T  YN ++ G C  G + 
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A +  + + +R  +    T++ L+ G C  G V  A +LF +M   GC P++  +N +I
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 421 DGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLSQGGNRVHDKASL-QTMVEQ-- 470
            GLC+AG+L KA   F K+       ++    +    L Q  + V D   L ++MV Q  
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGT 531

Query: 471 -------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                         C AG +    +I  ++   G  PD++ +N+LI   C  G ++ AL+
Sbjct: 532 SPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALE 591

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           +F+EL+ +   PD+ +Y +L++ L R +R E+A  +   M   GC P
Sbjct: 592 VFRELERRSA-PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 250/527 (47%), Gaps = 59/527 (11%)

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T +++GLC+  + D A  L  +M    CSPD VA+  ++NG C+ +R+DEA ++L    +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P   +Y+  IDGL +A+R D+A+   +KM E+K  P  V Y  ++ GL +AG++ +
Sbjct: 70  AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM +L  M E+G  P    Y  +I G    G +++AR + V++      P+   +T LI 
Sbjct: 130 AMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCF----PSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
           G+ + G +D+A    N+M + GC     P V + N +I  LC +G LE A   F +++  
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDS 249

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            + T F              +   +V   C A    +A   + +++E    P + TY SL
Sbjct: 250 LDLTHF--------------TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           ++GF K+G ++ AL   KE   +G  PD+VTY ++I+GL ++ R E+    F +M   G 
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 355

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P    Y +L+    + +    A  ++ Q                   LQ G V + +  
Sbjct: 356 EPDAVTYAALIDGFMKAKMIPKAHRVYRQ------------------MLQSGTVVSTVT- 396

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
                          Y I L GLC+ G+V EA   F  + E   + T  +   L+ G C 
Sbjct: 397 ---------------YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCS 441

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAY 727
            G +  A+++F   L  G    P + +Y  ++R L  +    K + Y
Sbjct: 442 EGNVSAAVELFRRMLDRG--CEPNLVSYNIIIRGLCRAGKLAKAYFY 486



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 2/331 (0%)

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           A +R  +    + +++I  L K    +   +   E+R+      +  +  LI G+ K   
Sbjct: 315 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 374

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
             KA   + +M +         YN +L+   +      A A +  M +  C+  +VT+S 
Sbjct: 375 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 434

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L++G    G    A+++   M  RG  PN  +Y I+I GLC+  +  +AY  F K+    
Sbjct: 435 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 494

Query: 234 CSPDFVAYNALLNGFC-KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
             PD   +N+ L+G C +L  V + + L  S    G  P L SYS L+DG+ RA   +  
Sbjct: 495 LCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + +M    + PDVV++  +IR L  AG+V +A+++  ++ ER   PD + Y +L+  
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDA 613

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
                 +++AR L   +  +   P  +  T+
Sbjct: 614 LSRCERMEEARLLSFHMKLQGCAPRHYDLTV 644



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 178/400 (44%), Gaps = 29/400 (7%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M +R +V DT    AL+ G C  G LD+A  L  E+      P+   FT++I G+CR   
Sbjct: 1   MIDRKLV-DTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKR 56

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLS 452
           +D+A  +  +  +AGC P    +N  IDGLCKA  ++ A  L  KM+  K  PT      
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPT------ 110

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   +V+    AG + +A  IL Q+ E GN P + TY  +I+G  K G +
Sbjct: 111 --------TVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRV 162

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT----PSPAV 568
             A ++F ++   G RPD+  Y  LI+GL ++ + ++A     QM +NGC     P   +
Sbjct: 163 EEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVI 222

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMD 627
           +  ++   C       A + +   L D       +   +   L K E  E AI  + +M 
Sbjct: 223 HNLVIRQLCASGNLEDALA-YFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMS 281

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            +     L  YT  + G  + G++ EAL      VE   I    +   +I GLCK G ++
Sbjct: 282 ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVE 341

Query: 688 LAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVH 725
              + F      G+   P    Y  L+   + +K   K H
Sbjct: 342 EGCERFHEMRNRGY--EPDAVTYAALIDGFMKAKMIPKAH 379



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 8/241 (3%)

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            L D     +L+NG CK G ++ A+ L  E+      PD V +  +INGL R  R ++AF
Sbjct: 5   KLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAF 61

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
            +  +  + GC P    Y   +   C+  +   AF L  +           +  + ++  
Sbjct: 62  SVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGL 121

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L+ G ++ A+  L +M  K N   L  YT+ + GL + G+V+EA  IF  ++        
Sbjct: 122 LKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA 181

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI--LRPRVC--NYLLRSLLFSKDNKKVHA 726
                LI GL K G LD A+      ++NG    + P V   N ++R L  S + +   A
Sbjct: 182 FVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALA 241

Query: 727 Y 727
           Y
Sbjct: 242 Y 242


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 263/509 (51%), Gaps = 21/509 (4%)

Query: 46  VGFRFFIWA-AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           + ++FF W   +R  + S  + + ++ ML     F+   + L E+      +   +F  L
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIEL 60

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
             GY   G  EK++E+  +M+   C      YN++++   +      ALAVY  M +   
Sbjct: 61  ARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGL 120

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P+  TF++L+N   K+ + +   K+ +EM  +   PN  TY+I+I  +C+    ++A +
Sbjct: 121 RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK 180

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +FL MK  GC P+   Y ++++G  K   VD+A  L      +G V     Y+ LI GL 
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG 240

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R+ R D A   +R+M  + ++PD V +  ++ GL  AG+  +A ++  + R+ G   D  
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN LI   C    LD+A  +  E+ +   +P+ +TF  L+ G+C++G + DA  L   M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKAS 463
           ++AGC P V ++N LIDGL K+G +E+A  L  +M+ +G  P              D  +
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEP--------------DVVT 406

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF---K 520
             T++++ C  G I  A ++  +++  G   + +TYN+++NG C  G ++ A KLF   K
Sbjct: 407 YNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMK 465

Query: 521 ELQLKG-LRPDSVTYGTLINGLQRVDREE 548
           +  + G + PD VTY TL+NG ++    E
Sbjct: 466 QETVDGVIDPDFVTYTTLLNGARQAGLSE 494



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 220/467 (47%), Gaps = 54/467 (11%)

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M+   C+    AYN+L++ F K     +ALA+ R   + G  P   +++ L++   +AK
Sbjct: 79  RMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAK 138

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D  +  + +M  +   P+V+ Y ++I  + + G V+ A+K+  DM+ RG  P+ + Y 
Sbjct: 139 RVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYT 198

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ++I G    G +D+A  L  E+     +     +  LI G+ R+G  D A KLF +M   
Sbjct: 199 SMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSK 258

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
           G  P    F +L+ GL  AG   +A  +F +  ++G    + L                 
Sbjct: 259 GLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNL--------------YNV 304

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C +  + +A++I  +L E G +PD+ T+N+L++G CK G I+ A  L  +++  G
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             PD   Y TLI+GL++  R E+A ++  +M   G  P    Y +L+  SC+        
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK-------- 416

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                      GR +++++  EE   KG   N +                 Y   L GLC
Sbjct: 417 ----------GGRIEDALRLFEEISAKG-FANTV----------------TYNTILNGLC 449

Query: 647 QDGQVKEALNIFSVLVE--CKAIVTPP--SCVKLIHGLCKRGYLDLA 689
             G+V EA  +F+ + +     ++ P   +   L++G  + G  +LA
Sbjct: 450 MAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 51/366 (13%)

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F  L  G    G+++ + +   +ME   C  +   +N+LID   KAG  +KA L  Y++ 
Sbjct: 57  FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKA-LAVYRV- 114

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                     + Q G R  D  +   ++  +  A  +   +K+  ++      P++ITY+
Sbjct: 115 ----------MGQSGLR-PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYS 163

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+  CK G +  ALK+F +++ +G RP+  TY ++I+GL +    + AF +F +M   
Sbjct: 164 ILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE 223

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           G   +  VY SL+    R                  SGR D + K   E L KG      
Sbjct: 224 GLVATRVVYNSLIHGLGR------------------SGRADAAAKLFREMLSKG------ 259

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
              L+ D          +T  + GL   G+  EA  IF    +    +       LI  L
Sbjct: 260 ---LQPDH-------VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTL 309

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AYHLLCRMKSVGYD 739
           CK   LD A ++F    ++G +      N L+  L  S    ++H A+ LL  MK  G  
Sbjct: 310 CKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKS---GRIHDAFILLGDMKRAGCT 366

Query: 740 LDACLY 745
            D  +Y
Sbjct: 367 PDVTVY 372



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 118/302 (39%), Gaps = 52/302 (17%)

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P +F+ L++G                Y +AGL+ K+ + L ++           YNSLI
Sbjct: 53  QPRIFIELARG----------------YASAGLLEKSVEALKRMEGHRCALTASAYNSLI 96

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           + F K G    AL +++ +   GLRPD+ T+  L+N  ++  R +  +++F +M    C+
Sbjct: 97  DAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCS 156

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y  L+   C+                                   G VE A++  
Sbjct: 157 PNVITYSILIDAVCK----------------------------------CGGVEKALKVF 182

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           L+M  +     +  YT  + GL + G V +A  +F  +     + T      LIHGL + 
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           G  D A  +F   L  G  L+P    +           +   A  +    + VG  LD  
Sbjct: 243 GRADAAAKLFREMLSKG--LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300

Query: 744 LY 745
           LY
Sbjct: 301 LY 302


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 173/588 (29%), Positives = 287/588 (48%), Gaps = 43/588 (7%)

Query: 57  RKRLRSFASNSAVISMLL------KPNGFDLYWQTLDELR-------------SGNVSVV 97
           R   R  AS   ++S LL      +P  FDL  +T  + R                V V 
Sbjct: 62  RMSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVP 121

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +     L++   + G    A E++  +   D + + Y  N +++   +   F  A  V  
Sbjct: 122 ASASNALLAALSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVIS 181

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM K    P++VT ++LI+   ++G  + AI ++D M  +G+ P   T+  V+ GLC+  
Sbjct: 182 EMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHR 241

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R D+A  +F  M     +PD  ++N L+ GFC++  V+EA+   +  ++ G  P + S+S
Sbjct: 242 RFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFS 301

Query: 278 CLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           CLI GLF  + + D A A+ R+M    + PD V+Y ++I G   AG + +A+++  +M  
Sbjct: 302 CLI-GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G +PD   YN L+ G C    L  A  L  E+ +R   P+  TFT LI G CR+G  + 
Sbjct: 361 LGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEK 420

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL------ 447
           A +LF+ +      P V  +N+LIDG+C+ G+L KAN L+  M   EI  N         
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480

Query: 448 -------------FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
                        FL        + +  +  ++++ YC +G + K  + L ++ +   LP
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+IT+N+LI+G+ K  N++GA  +F  ++ + ++PD+VTY  +ING       E+A R+F
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
            +M  +G  P    Y SL+           AF L  + +      DD+
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 220/475 (46%), Gaps = 13/475 (2%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR       +++ +I    +    D     +D + +  +      F  ++ G  K    +
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFD 244

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA E F  M +    PDV  +N ++    R      A+  Y EM +    P++V+FS LI
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
              S  GK + A   L EM   G++P+   YT+VI G C+     EA R+  +M   GC 
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V YN LLNG CK  R+ +A  LL   ++ G  P L +++ LI G  R   +++A   
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +  +  +++ PDVV Y  +I G+   G +  A +L  DM  R I P+   Y+ LI   C+
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G +++A     E+  + +LPN  T+  +I G CR+G V   Q+   KM +    P +  
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           FN LI G  K   +  A  +F  ME          + Q      D  +   ++  +   G
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIME--------KEMVQP-----DAVTYNMIINGFSEQG 591

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            + +A ++  ++  SG  PD  TY SLING    GN   A +L  E+  +G  PD
Sbjct: 592 NMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 230/528 (43%), Gaps = 54/528 (10%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A+EAYRL L    S    +    N +++ +CK    D+A  ++   EK           C
Sbjct: 141 AEEAYRLVLS---SDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEK----------RC 187

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +                          PDVV + V+I     AG V  A+ L+  M  +G
Sbjct: 188 VF-------------------------PDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    +N+++KG C     D+A+ +   + +    P+  +F ILI G CR G V++A 
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           K + +M++ G  P V  F+ LI      G+++ A               +LR  +G   V
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA-------------AAYLREMKGLGLV 329

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D      ++  +C AG + +A ++  ++   G LPD++TYN+L+NG CK   +  A +L
Sbjct: 330 PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEEL 389

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             E++ +G+ PD  T+ TLI+G  R    E A ++F  +      P    Y SL+   CR
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCR 449

Query: 579 RRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +   + A  LW   + R+I          I+   +KG+VE A   L EM  K N   +  
Sbjct: 450 KGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMT 509

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y   + G C+ G VK+       +++   +    +   LIHG  K   +  A +VF    
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIME 569

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           K   +++P    Y +    FS+      A  +  +M + G + D   Y
Sbjct: 570 KE--MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTY 615


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 164/561 (29%), Positives = 280/561 (49%), Gaps = 45/561 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    P +  ++ +L+    +     AL  ++++ 
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI- 172

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN++ F+ L+NGL + G+   A+ +LD M + G+ PN+ TY  ++ G+C++    
Sbjct: 173 ---CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   P+ V Y+A+++G  K  R  +A  L    ++ G  P L +Y+C+
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G   + R+ EA    R+MFE K+ PDVV + V+I  L + GK  +A +L ++M  RGI
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 340 VPDTYCYNALIKGF-----------------------------------CDLGLLDQARS 364
           +P+T  YN++I GF                                   C    +D    
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +R  + NT T+T LI G C+ G ++ A  L  +M  +G  P+V   N L+DGLC
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKI 483
             G+L+ A  +F  M+  K   + L  S   N V  D  +   ++      G   +A ++
Sbjct: 470 NNGKLKDALEMFKVMQKSK---MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++   G +PD ITYNS+I+G CK   ++ A ++F  +  KG  PD VT+ TLING  +
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCK 586

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           V R  D   +F +M + G   +   Y++L+   C+    + A  ++ + +      D  +
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646

Query: 604 MKSIEEFL-QKGEVENAIQGL 623
           ++++   L  K E++ A+Q L
Sbjct: 647 IRNMLTGLWSKEELKRAVQCL 667



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 167/594 (28%), Positives = 283/594 (47%), Gaps = 59/594 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  MV+   LP ++ F  L+  + +  + +V I +  +M  R I  N +++TI+I 
Sbjct: 60  AIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIK 119

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL-------------------------- 245
             C  ++   A   F K+   G  P  V ++ LL                          
Sbjct: 120 CFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIA 179

Query: 246 -----NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
                NG C+  RV EA+ALL    +DG  P   +Y  ++DG+ +      A    RKM 
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239

Query: 301 E-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
           E  +I+P+VV+Y  +I GL + G+  DA  L S+M+E+GI P+ + YN +I GFC  G  
Sbjct: 240 EVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRW 299

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A+ L  E+++R   P+  TF++LI  + + G   +A++L+N+M   G  P+   +N++
Sbjct: 300 SEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSM 359

Query: 420 IDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           IDG  K   L+ A  +FY M   G +P              D  +   +++ YC A  + 
Sbjct: 360 IDGFSKQNRLDAAERMFYLMATKGCSP--------------DVITFSILIDGYCGAKRVD 405

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
              K+L +++  G + + ITY +LI+GFC++GN+N AL L +E+   G+ P+ VT  TL+
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465

Query: 539 NGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +GL    + +DA  +F  M           P N   P    Y  L+       KFS A  
Sbjct: 466 DGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEE 525

Query: 588 LWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L+ +        D  +  S I+   ++  ++ A Q    M  K     +  +T  + G C
Sbjct: 526 LYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYC 585

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           + G+V + L +F  +     +    +   LIHG C+ G ++ A+D+F   + +G
Sbjct: 586 KVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSG 639



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 233/455 (51%), Gaps = 27/455 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  ++ G  K+GD   AL    KM+E    +P+V IY+A+++  ++      A  ++ E
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    PN+ T++ +ING   SG+   A ++L EM +R + P+  T++++I+ L +  +
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  L+ +M   G  P+ + YN++++GF K  R+D A  +       G  P + ++S 
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG   AKR D+      +M    +  + + Y  +I G  + G +  A+ LL +M   G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-----------RDSLPNTHTFTILICG 387
           + P+    N L+ G C+ G L  A  +   + K            D  P+  T+ ILICG
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
           +   G   +A++L+ +M   G  P    +N++IDGLCK   L++A  +F  M   G +P 
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP- 572

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        D  +  T++  YC  G +    ++  ++   G + + ITY +LI+GF
Sbjct: 573 -------------DVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGF 619

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           C+VGNINGAL +F+E+   G+ PD++T   ++ GL
Sbjct: 620 CQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 220/496 (44%), Gaps = 62/496 (12%)

Query: 222 AYRLFLKMKDSGCSPDFVAYN-ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           + R  L  K SG +  F      L +GF +++ +D+A+ L     +   +P +  +  L+
Sbjct: 24  SIRHTLAKKSSGKAGGFGGERLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLL 83

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             + R +R D   + +RKM   +I  ++  + ++I+      K+  A+     + + G  
Sbjct: 84  GVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFH 143

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    ++ L+ G C    + +A     +I K    PN   FT L+ G+CR G V +A  L
Sbjct: 144 PSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVAL 199

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPTLFLRLSQG-- 454
            ++M + G  P+   +  ++DG+CK G+   A  L  KME    I  N  ++  +  G  
Sbjct: 200 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLW 259

Query: 455 -GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              R  D  +L                  M+  +C++G   +A ++L ++ E    PD++
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV 319

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           T++ LIN   K G    A +L+ E+  +G+ P+++TY ++I+G  + +R + A R+F  M
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              GC+P    +  L+   C  +                  R D+ MK + E  ++G V 
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAK------------------RVDDGMKLLHEMSRRGLVA 421

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           N I                 YT  + G CQ G +  AL++   ++         +C  L+
Sbjct: 422 NTIT----------------YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLL 465

Query: 678 HGLCKRGYLDLAMDVF 693
            GLC  G L  A+++F
Sbjct: 466 DGLCNNGKLKDALEMF 481



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 214/502 (42%), Gaps = 35/502 (6%)

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FC  R +   LA   S +  GF    G    L  G    K  D+A   +  M   +  P 
Sbjct: 20  FCT-RSIRHTLAKKSSGKAGGFG---GERLKLQSGFHEIKGLDDAIDLFGYMVRSRPLPC 75

Query: 308 VV----LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           V+    L GV++R      +    + L   M  R I  + Y +  LIK FC    L  A 
Sbjct: 76  VIDFCKLLGVVVR----MERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFAL 131

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           S   +I K    P+  TF+ L+ G+C    V +A   F+++    C P+V  F  L++GL
Sbjct: 132 STFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGL 187

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C+ G + +A  L  +M E G  P              ++ +  T+V+  C  G    A  
Sbjct: 188 CREGRVVEAVALLDRMVEDGLQP--------------NQITYGTIVDGMCKMGDTVSALN 233

Query: 483 ILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +L ++ E   + P+++ Y+++I+G  K G    A  LF E+Q KG+ P+  TY  +ING 
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRD 600
               R  +A R+  +M +   +P    +  L+    +  KF  A  L+ + L R I    
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                 I+ F ++  ++ A +    M  K     +  ++I + G C   +V + + +   
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           +     +    +   LIHG C+ G L+ A+D+    + +G       CN LL  L    +
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL--CNN 471

Query: 721 NKKVHAYHLLCRMKSVGYDLDA 742
            K   A  +   M+    DLDA
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDA 493


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 184/668 (27%), Positives = 311/668 (46%), Gaps = 61/668 (9%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           FF+ A +   +      + ++S LLK N  +L+W+  + +   NV      +  LI+ ++
Sbjct: 188 FFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHF 247

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + G+ ++      +M+E  C P +  YN V+    R      A  +   M K   + ++ 
Sbjct: 248 RAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVF 307

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T+S+LI+G  K  +   A  ML+EM  +G+ P    YT +I G  +   + EA+R+  +M
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF------------------------- 264
              G   +   YNAL+ G CK   +++A ALL                            
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNT 427

Query: 265 ----------EKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
                     +K   VP   +Y+C  +I+GL R    ++A   +  M    ++P+ V+Y 
Sbjct: 428 SRVKDLLSEMKKSNLVPT--AYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYT 485

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I+G  + G+ ++A+++L  M ++G+ PD  CYN++I G C    +++A+   VE+ +R
Sbjct: 486 TLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER 545

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN +T+  LI G C++G +  A + F +M   G  P+  +  ALIDG CK G   +A
Sbjct: 546 GLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605

Query: 433 NLLFYKM-------EIGKNPTLFLRLSQGG---------------NRVHDKASLQTMVEQ 470
             +F  M       ++     L   L + G                 V D  +  +++  
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISG 665

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C  G I KA+++   + + G  P+IITYN+LING CK G I  A +LF  +  KGL  +
Sbjct: 666 FCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHN 725

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +VTY T+I+G  +      AFR+F +M   G  P   VY +L+    +      A SL+L
Sbjct: 726 AVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFL 785

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           + ++            ++ F + G+V  A Q L +M  K        YTI +   C+ G 
Sbjct: 786 ESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845

Query: 651 VKEALNIF 658
           +KEA   F
Sbjct: 846 LKEAEQFF 853



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 179/685 (26%), Positives = 303/685 (44%), Gaps = 94/685 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I   ++       ++  +E+ +  V +    +  L+ G  K GD EKA     +M  
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   YN ++    ++Q       +  EM K N +P   T  ++INGL + G  E 
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++ + M   G+ PN   YT +I G  Q  R  EA R+   M   G  PD + YN+++ 
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR------AKRY----------- 289
           G CK R+++EA   L    + G  P + +Y  LI G  +      A RY           
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584

Query: 290 ------------------DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
                              EA + +R M    + PDV  Y  +I GL   GK++ AM+LL
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+  E+G+VPD + YN++I GFC  G + +A  L   + ++   PN  T+  LI G+C+ 
Sbjct: 645 SEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKA 704

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP------ 445
           G ++ A++LF+ +   G   +   +  +IDG CK+G L KA  LF +M +   P      
Sbjct: 705 GEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVY 764

Query: 446 -----------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
                            +LFL   Q G      +SL  +++ +C +G + +A ++L  + 
Sbjct: 765 SALIDGCRKEGNTEKALSLFLESVQKG--FASTSSLNALMDGFCKSGKVIEANQLLEDMV 822

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           +    PD +TY  LI+  CK G +  A + F ++Q + L P+++TY  L++G     R  
Sbjct: 823 DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRS 882

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           + F +F +M      P        +TWS           +   +L++  G   +++K ++
Sbjct: 883 EMFALFDEMIAKDIEPDG------VTWSV----------MIDAHLKE--GDHVKTLKLVD 924

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           + L+KG                 +       + +  LC+   V E L +   + E    +
Sbjct: 925 DMLKKG----------------GNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL 968

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVF 693
           +  +C  L+    K G +D A  V 
Sbjct: 969 SLATCSTLVRCFHKAGKMDGAARVL 993



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 212/810 (26%), Positives = 358/810 (44%), Gaps = 105/810 (12%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPF----LSKTTVTSVIMKTKN-PQVGFRFFIWAAK 56
           S+ +NE+ T L+     +   E LLP     LS   V SVI K  N P+    FF W   
Sbjct: 39  SNIVNEITTFLN-----QKNWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQF 93

Query: 57  R----KRLRSFA--------------SNSAVISMLLKPNGFDLYWQTLDEL--------- 89
           +    ++L+SF+              ++S V  M++  +G   Y + LD L         
Sbjct: 94  QMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGG--YSEILDSLIKSCKEFDL 151

Query: 90  ---RSGNVSVVSD---VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
                   S  +D   VF +LI GY K G  ++A+  F   K       +   N +L+  
Sbjct: 152 NNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDL 211

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +     L    Y  M++ N L ++ T++ LIN   ++G  +   ++L EM ++G  P+ 
Sbjct: 212 LKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSL 271

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY +VI GLC+    DEA+ L   M   G   D   Y+ L++GF K +R  EA  +L  
Sbjct: 272 VTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEE 331

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P   +Y+ LIDG  R     EA+    +M    ++ ++  Y  +++G+ + G 
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           ++ A  LL++M   GI PDT  YN +I+G+       + + L  E+ K + +P  +T  +
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451

Query: 384 LICGMCRNGMVDDAQKLFN-----------------------------------KMEKAG 408
           +I G+CR+G ++DA ++F                                     M+K G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 409 CFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P V  +N++I GLCK+ ++E+A + L   +E G  P ++              +   +
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVY--------------TYGAL 557

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  YC +G +  A +   ++   G  P+ +   +LI+G+CK G+   A  +F+ +  + +
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD  TY  LI+GL R  + + A  +  +  + G  P    Y S+++  C++     AF 
Sbjct: 618 HPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ 677

Query: 588 LWLQYL--RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
           L  +Y+  + IS         I    + GE+E A +    +  K        Y   + G 
Sbjct: 678 LH-EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           C+ G + +A  +F  +      V P S V   LI G  K G  + A+ +FL +++ GF  
Sbjct: 737 CKSGNLSKAFRLFDEMT--LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
              + N L+    F K  K + A  LL  M
Sbjct: 795 TSSL-NALMDG--FCKSGKVIEANQLLEDM 821


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 189/686 (27%), Positives = 312/686 (45%), Gaps = 27/686 (3%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLY 82
           PLLP      VT+VI   K+P      F    K    + + ++  ++I  L     F+  
Sbjct: 4   PLLP----KHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAM 59

Query: 83  WQTLDELRS--GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
            + L ++R   GN  ++  V+   +  Y + G  ++A+  F +M  +DC+P V+ YNA++
Sbjct: 60  EEVLVDMRQNVGN-HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +I      F  A  VY  M      P++ +F++ +    ++ +   A+++L+ M+ +G  
Sbjct: 119 SILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCE 178

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            N   Y  V+ G  + N  DE Y LF KM  SG S     +N LL+  CK   V E   L
Sbjct: 179 MNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKL 238

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    K G +P L +Y+  I GL +    D A     ++ ++  +PDVV Y  +I GL +
Sbjct: 239 LDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK 298

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             K ++A   L  +   G+ PD++ YN LI G+C  G++  A  + V       +P+  T
Sbjct: 299 NSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFT 358

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKM 439
           +  LI G+C  G  + A  LFN+    G  P+V ++N LI GL   G  LE A L     
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E G  P +               +   +V   C  G +  A  ++  +   G  PDI T+
Sbjct: 419 EKGLIPEV--------------QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N LI+G+     +  AL++   +   G+ PD  TY +L+NGL +  + ED    +  M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE 524

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM--KSIEEFLQKGEVE 617
            GC P+   +  L+   CR  K   A  L L+ +++ S   D       I+ F + G+++
Sbjct: 525 KGCAPNLFTFNILLESLCRYHKLDKALGL-LEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 618 NAIQGLLEM-DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
            A     +M +  +       Y I +    +   V  A  +F  +V+        +   +
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFI 702
           + G CK G +DL     L  ++NGFI
Sbjct: 644 VDGFCKTGNVDLGYKFLLEMMENGFI 669



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 277/597 (46%), Gaps = 57/597 (9%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           R++SF   S       +P+      + L+ + S    +    +  ++ G+Y+    ++  
Sbjct: 152 RMKSFCRTS-------RPHA---ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E FGKM        +  +N +L++  +K        +  +++K   LPN+ T++  I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            + G+ + A++M+  +  +G  P+  TY  +I GLC+ ++  EA     K+ + G  PD 
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             YN L+ G+CK   V  A  +L +   +GFVP   +Y  LIDGL      + A A + +
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
              + I+P+V+LY  +I+GLS  G + +A +L S+M E+G++P+   +N L+ G C +G 
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +  A  L   +  +   P+  TF ILI G      +++A ++ + M   G  P V  +N+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQGGNRVH---------------- 459
           L++GLCK  + E     +  M E G  P LF    L +   R H                
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561

Query: 460 ---DKASLQTMVEQYCTAGLIHKAYKILMQLAE----SGNLPDIITYNSLINGFCKVGNI 512
              D  +  T+++ +C  G +  AY +  ++ E    S + P   TYN +I+ F +  N+
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNIIIHAFTEKLNV 618

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A KLF+E+  + L PD  TY  +++G  +    +  ++   +M +NG  PS      +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRV 678

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
           +   C                  +  R  E+   I   +QKG V  A+  + + D K
Sbjct: 679 INCLC------------------VEDRVYEAAGIIHRMVQKGLVPEAVNTIFDHDKK 717



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/580 (24%), Positives = 236/580 (40%), Gaps = 56/580 (9%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR---ADEAYRLF 226
           T+  +I  L   GK E   ++L +M Q   + N     + +  +    R     EA  +F
Sbjct: 42  TYRSIIEKLGLYGKFEAMEEVLVDMRQN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M    C P   +YNA+++        D+A  +       G  P + S++  +    R 
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRT 159

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R   A      M  +  E +VV Y  ++ G  E     +  +L   M   G+      +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTF 219

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N L+   C  G + +   L  ++ KR  LPN  T+   I G+C+ G +D A ++  ++  
Sbjct: 220 NKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLID 279

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P V  +N LI GLCK  + ++A +   K+   G  P              D  +  
Sbjct: 280 QGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEP--------------DSFTYN 325

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  YC  G++  A +IL+    +G +PD  TY SLI+G C  G  N AL LF E   K
Sbjct: 326 TLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G++P+ + Y TLI GL       +A ++  +M + G  P    +  L+   C+    S A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
             L                  ++  + KG   +                +  + I + G 
Sbjct: 446 DGL------------------VKVMISKGYFPD----------------IFTFNILIHGY 471

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
               +++ AL I  V+++        +   L++GLCK    +  M+ +   ++ G     
Sbjct: 472 STQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNL 531

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              N LL SL   + +K   A  LL  MK+   + DA  +
Sbjct: 532 FTFNILLESL--CRYHKLDKALGLLEEMKNKSVNPDAVTF 569



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 12/236 (5%)

Query: 7   EVLTIL--DTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           E+L ++  + V P       LL  L KT+    +M+T      ++  +       L +F 
Sbjct: 482 EILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMET------YKTMVEKGCAPNLFTF- 534

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
             + ++  L + +  D     L+E+++ +V+  +  F  LI G+ K GD + A   F KM
Sbjct: 535 --NILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592

Query: 125 KE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           +E +        YN +++    K    +A  ++ EMV     P+  T+ L+++G  K+G 
Sbjct: 593 EEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
            ++  K L EM + G +P+  T   VI+ LC  +R  EA  +  +M   G  P+ V
Sbjct: 653 VDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 294/632 (46%), Gaps = 23/632 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I    K   FD   +  +E+R  + ++    + V+ISG  + G  E+A     +M +
Sbjct: 247 STFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVD 306

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           +   PD + Y A++N   +      A A+  EM      PNIV +  L++G  K GKT  
Sbjct: 307 YGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAE 366

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L EM   G+ PNK  Y  +I GLC+I +   A +L  +M   G  PD   YN L+ 
Sbjct: 367 AFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQ 426

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +    D A  LL      G +P + SY  +I+GL +     EA     +M  E ++P
Sbjct: 427 GHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKP 486

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  +Y  +I G S+ G +  A + L  M +  + PD +CYN+LIKG   +G +++A    
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYY 546

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ KR  +P+  T++ LI G C+ G ++ A +L  +M  +G  P+   +  L++G  K+
Sbjct: 547 AQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKS 606

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            + EK + +   M              G     D      ++     +  +  A+ +L +
Sbjct: 607 NDYEKVSSILQSM-------------LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++G +PD+  Y+SLI+G CK+ ++  A+ L  E+  +GL P  V Y  LI+G  R   
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
              A  +F  +   G  P+   Y +L+  +C+    + AF L+ + L      D      
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD----AF 769

Query: 607 IEEFLQKG-----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           +   L  G     ++E A+    EM F      ++ +   + G C+ G+++E   +  V+
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEM-FNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVM 828

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           ++ + +    +  K++    K G L  A  VF
Sbjct: 829 MDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF 860



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 200/716 (27%), Positives = 324/716 (45%), Gaps = 51/716 (7%)

Query: 29  LSKTTVTSVIMKTK----NPQVGFRFFIWAAKR------KRLRSFASNSAVISMLLKPNG 78
           LS   V+S+I   +    +P++   FF W+  R            A++    S+  + NG
Sbjct: 77  LSPDAVSSLIFGGRSHSLHPKLLLDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANG 136

Query: 79  FDLYWQTL------------------DELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
             L+   L                   + RS + S  + V  VL+  Y K G    A + 
Sbjct: 137 L-LHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQV 195

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
              M +    P     N +L    R     L   +   M     LP++ T+S  I    K
Sbjct: 196 VLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCK 255

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +   + A K+ +EM +R    N+ TY ++ISGLC+    +EA+    +M D G SPD   
Sbjct: 256 ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 315

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y AL+NG CK  R+ EA ALL      G  P +  Y  L+DG  +  +  EA+   ++M 
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              ++P+ ++Y  +IRGL + G++  A KLL +M + G+ PDT+ YN L++G       D
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A  L  E+     LPN +++ I+I G+C+NG   +A  L  +M   G  P+  M+  LI
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            G  K G +  A     KM +   +P LF                 ++++   T G + +
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLF--------------CYNSLIKGLSTVGRMEE 541

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A +   Q+ + G +PD  TY+ LI+G+CK GN+  A +L +++   GL+P++ TY  L+ 
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  + +  E    I   M  +G  P   +Y  ++    R     +AF +  +  ++    
Sbjct: 602 GYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661

Query: 600 DDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           D     S+   L K  ++E A+  L EM  +  +  +  Y   + G C+ G +  A N+F
Sbjct: 662 DLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVF 721

Query: 659 SVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             ++  K +V  P+CV    LI G CK G +  A D++   L  G      V N L
Sbjct: 722 DSIL-AKGLV--PNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL 774



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 240/473 (50%), Gaps = 20/473 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+++  D + A E   +M+     P+VY Y  ++N   +      A  +  EM+   
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN   ++ LI G SK G   +A + L++MT+  + P+ F Y  +I GL  + R +EA 
Sbjct: 484 LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAE 543

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             + +++  G  PD   Y+ L++G+CK   +++A  LLR     G  P   +Y+ L++G 
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F++  Y++  +  + M     +PD  +YG++IR LS +  ++ A  +L+++ + G+VPD 
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 663

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + Y++LI G C +  +++A  L  E+ K    P    +  LI G CR+G +  A+ +F+ 
Sbjct: 664 HIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 723

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQGGNRVHD 460
           +   G  P+   + ALIDG CK G++  A  L+ +M + G  P  F+   L+ G     D
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG---CSD 780

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
            A L+  +  + T  + ++ Y             ++  +N+L++GFCK G +    KL  
Sbjct: 781 AADLEQAL--FLTEEMFNRGYA------------NVSLFNTLVHGFCKRGKLQETEKLLH 826

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +  + + P++ T   +++   +  +  +A R+F ++ Q   + S     SL+
Sbjct: 827 VMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL 879



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 199/432 (46%), Gaps = 42/432 (9%)

Query: 326 DAMKLL----SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           DAM+LL      M   GI+PD Y Y+  I+  C     D A+ +  E+ +RD   N  T+
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
            ++I G+CR+G V++A     +M   G  P    + AL++GLCK   L++A  L  +M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 442 -GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P + +                T+V+ +   G   +A+ IL ++  +G  P+ I Y+
Sbjct: 342 SGLKPNIVV--------------YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYD 387

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +LI G CK+G +  A KL KE+   GLRPD+ TY  L+ G  +   ++ AF +  +M  +
Sbjct: 388 NLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS 447

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVEN 618
           G  P+   Y  ++   C+  +   A +L  + + +   + +  M +  I    ++G +  
Sbjct: 448 GILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGNISL 506

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A + L +M        L  Y   + GL   G+++EA   ++ + +   +    +   LIH
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY------------------LLRSLLFSKD 720
           G CK G L+ A  +    L +G  L+P    Y                  +L+S+L S D
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSG--LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 721 NKKVHAYHLLCR 732
               H Y ++ R
Sbjct: 625 KPDNHIYGIVIR 636



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 2/347 (0%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
            ++    KR  +    + S +I    K    +   Q L ++ +  +   +D +  L+ GY
Sbjct: 544 EYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGY 603

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K  D EK       M     +PD +IY  V+    R +   +A  V  E+ K   +P++
Sbjct: 604 FKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 663

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +S LI+GL K    E A+ +LDEM + G+ P    Y  +I G C+      A  +F  
Sbjct: 664 HIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 723

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+ V Y AL++G CK   + +A  L +     G  P    Y+ L  G   A  
Sbjct: 724 ILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAAD 783

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A     +MF      +V L+  ++ G  + GK+++  KLL  M +R IVP+      
Sbjct: 784 LEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEK 842

Query: 349 LIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMV 394
           ++  F   G L +A  +  E+  K+ S   T  F++L   M   G++
Sbjct: 843 VVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLI 889



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 122/304 (40%), Gaps = 51/304 (16%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           + +++N +V F       K   +      S++IS L K    +     LDE+    +   
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPG 697

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
              +  LI G+ + GD  +A                                     V+ 
Sbjct: 698 IVCYNALIDGFCRSGDISRARN-----------------------------------VFD 722

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            ++    +PN VT++ LI+G  K+G    A  +  EM  RGI P+ F Y ++ +G     
Sbjct: 723 SILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAA 782

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             ++A  L  +M + G + +   +N L++GFCK  ++ E   LL        VP   +  
Sbjct: 783 DLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVE 841

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++    +A +  EA+  + ++ ++K               S++   + ++ L +DM  +
Sbjct: 842 KVVSEFGKAGKLGEAHRVFAELQQKKA--------------SQSATDRFSL-LFTDMINK 886

Query: 338 GIVP 341
           G++P
Sbjct: 887 GLIP 890


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 243/477 (50%), Gaps = 26/477 (5%)

Query: 116 KALESFGKMKEFD-------------CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L +  KMK+FD                ++Y YN ++N   R+    LALA+  +M+KL
Sbjct: 90  KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+IVT S L+NG     +   A+ ++D+M + G  P+  T+T +I GL   N+A EA
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   GC P+ V Y  ++NG CK   +D A  LL   E       +  YS +ID 
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + +  D+A   + +M  + + P+V+ Y  +I  L    +  DA +LLSDM ER I P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +NALI  F   G L +A  L  E+ KR   P+  T++ LI G C +  +D+A+ +F 
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M    CFP+V  +N LI+G CKA  +++   LF +M            SQ G  V +  
Sbjct: 390 LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM------------SQRG-LVGNTV 436

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++  +  A     A  +  Q+   G  P+I+TYN+L++G CK G +  A+ +F+ L
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           Q   + P   TY  +I G+ +  + ED + +F  +   G  P   +Y ++++  CR+
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 259/520 (49%), Gaps = 15/520 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    K + L S    + ++S + K   FDL     ++++   +S     + +LI+ + 
Sbjct: 72  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +P +   +++LN     +    A+A+  +MV++   P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M QRG  PN  TY +V++GLC+    D A+ L  KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           + +    + V Y+ +++  CK R  D+AL L    E  G  P + +YS LI  L   +R+
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E KI P+VV +  +I    + GK+ +A KL  +M +R I PD + Y++L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GFC    LD+A+ +   +  +D  PN  T+  LI G C+   +D+  +LF +M + G 
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             +   +  LI G  +A + + A ++F +M   G +P +               +  T++
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM--------------TYNTLL 477

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C  G + KA  +   L  S   P I TYN +I G CK G +     LF  L LKG++
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           PD + Y T+I+G  R   +E+A  +F +M ++G  P    
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 230/521 (44%), Gaps = 27/521 (5%)

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y  +L       ++D+A+ L     K   +P +  ++ L+  + + K++D   +   KM 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              I  ++  Y ++I       ++  A+ LL  M + G  P     ++L+ G+C    + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A +L  ++ +    P+T TFT LI G+  +    +A  L ++M + GC P++  +  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPT-----------------------LFLRLSQGGNR 457
           +GLCK G+++ A  L  KME  K                          LF  +   G R
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  +++   C       A ++L  + E    P+++T+N+LI+ F K G +  A K
Sbjct: 293 -PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L+ E+  + + PD  TY +LING    DR ++A  +F  M    C P+   Y +L+   C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411

Query: 578 RRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           + ++      L+ +   R + G        I  F Q  + +NA     +M        + 
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y   L GLC++G++++A+ +F  L   K   T  +   +I G+CK G ++   D+F   
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
              G  ++P V  Y      F +   K  A  L  +M+  G
Sbjct: 532 SLKG--VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 35/209 (16%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++  T+ +   K K    G   F   ++R  + +  + + +I    +    D       +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V      +  L+ G  K G  EKA+  F  ++    +P +Y YN           
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN----------- 509

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                                   ++I G+ K+GK E    +   ++ +G+ P+   Y  
Sbjct: 510 ------------------------IMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPD 237
           +ISG C+    +EA  LF KM++ G  PD
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPD 574


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 174/613 (28%), Positives = 298/613 (48%), Gaps = 25/613 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
           +M E  C PDV+ YN +L       R Q  L  L +  +       P++V+++ ++NG  
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G ++ A     EM  RGILP+  TY+ +I+ LC+    D+A  +   M  +G  PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN++L+G+C   +  EA+  L+    DG  P + +YS L++ L +  R  EA   +  M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +  +EPD+  Y  +++G +  G + +   LL  M   GI PD + +N LI  +     +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           DQA  +  ++ +    PN   +  +I  +C++G VDDA   F +M   G  P++ ++ +L
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I GLC   + +KA  L  +M    I  N   F                 ++++ +C  G 
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFF----------------NSIIDSHCKEGR 496

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + ++ K+   +   G  PDIITYN+LI+G C  G ++ A KL   +   G++PD VTYGT
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LING  RV R +DA  +F +M  +G +P+   Y  ++      R+ + A  L++   +  
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT--IWLIGLCQDGQVKEA 654
           +  +  +   I   L K  + +    + + +  L D QL   T  I +  L + G++ EA
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQ-NLCLTDLQLETRTFNIMIGALLKCGRMDEA 675

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
            ++F+       +    +   +   L ++G L+   D+FL   +NG     R+ N ++R 
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735

Query: 715 LLFSKDNKKVHAY 727
           LL   D  +   Y
Sbjct: 736 LLQRGDITRAGTY 748



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/545 (24%), Positives = 241/545 (44%), Gaps = 13/545 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K  +    +  +     R  L    + S++I+ L K    D   + L+ 
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+ +  KM+    +P+V  Y++++N   +   
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P+I T+  L+ G +  G       +LD M + GI P+   + I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +P+ V Y  +++  CK   VD+A+        +G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ LI GL    ++D+A     +M +  I  + + +  +I    + G+V ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   YN LI G C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           CR   +DDA  LF +M  +G  P++  +N ++ G            LF+         L+
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQG------------LFHTRRTAAAKELY 609

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 610 VSITKSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ A  LF      GL PD  TY  +   L      E+   +F  M +NGC+    +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728

Query: 569 YKSLM 573
             S++
Sbjct: 729 LNSIV 733



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 273/597 (45%), Gaps = 45/597 (7%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P    Y
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    PDV  Y  +++GL +  + ++A++LL   +D R  G  PD   YN ++ GF   G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R  LP+  T++ +I  +C+   +D A ++ N M K G  P    +N
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVH----------- 459
           +++ G C +G+ ++A     KM   G  P      +L   L + G               
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 460 ----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+ +T+++ Y T G + + + +L  +  +G  PD   +N LI  + K   ++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++  GL P+ V YGT+I+ L +    +DA   F QM   G TP+  VY SL+  
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DF 633
            C   K+  A  L L+ L R I          I+   ++G V  + + L ++  ++    
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKP 514

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
            +  Y   + G C  G++ EA  + + +V   ++   P  V    LI+G C+   +D A+
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMV---SVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 691 DVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +F   + +G  + P +  Y  +L+ L  ++  +   A  L   +   G  L+   Y
Sbjct: 572 ALFKEMVSSG--VSPNIITYNIILQGLFHTR--RTAAAKELYVSITKSGTQLELSTY 624



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 53/226 (23%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +V V  D+  +  LI+GY +V   + AL  F +M      P++  YN +L   F  +   
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM-------------------- 190
            A  +Y  + K      + T++++++GL K+  T+ A++M                    
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 191 --------LDEM-------TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
                   +DE        +  G++P+  TY+++   L +    +E   LFL M+++GCS
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            D    + +LN            +++R   + G + R G+Y  +ID
Sbjct: 724 AD----SRMLN------------SIVRKLLQRGDITRAGTYLFMID 753


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 180/645 (27%), Positives = 317/645 (49%), Gaps = 34/645 (5%)

Query: 20  PALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
           P+L+ ++  +S + V+S+     +P+    F  W ++  R +    + A +  LL  NG+
Sbjct: 79  PSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGY 138

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM---KEFDCQPDVYI- 135
                         V VV  +  ++I     VGD    L+   KM   + F+ +  + I 
Sbjct: 139 --------------VGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIG 184

Query: 136 -YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN +LN   R  L      VY EM++    PNI T++ ++NG  K G  E A + + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G+ P+ FTYT +I G CQ    D A+++F +M   GC  + VAY  L++G C  RR+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DEA+ L    + D   P + +Y+ LI  L  ++R  EA    ++M E  I+P++  Y V+
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I  L    K + A +LL  M E+G++P+   YNALI G+C  G+++ A  +   +  R  
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PNT T+  LI G C++  V  A  + NKM +    P V  +N+LIDG C++G  + A  
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA-- 481

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             Y++         L L      V D+ +  +M++  C +  + +A  +   L + G  P
Sbjct: 482 --YRL---------LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +++ Y +LI+G+CK G ++ A  + +++  K   P+S+T+  LI+GL    + ++A  + 
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M + G  P+ +    L+    +   F  A+S + Q L   +  D  +  + I+ + ++
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           G + +A   + +M        L  Y+  + G    GQ   A ++ 
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/631 (27%), Positives = 295/631 (46%), Gaps = 52/631 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY +  D + A + F +M    C+ +   Y  +++     +    A+ ++ +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P + T+++LI  L  S +   A+ ++ EM + GI PN  TYT++I  LC   + 
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M + G  P+ + YNAL+NG+CK   +++A+ ++   E     P   +Y+ L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  ++  + +A     KM E K+ PDVV Y  +I G   +G    A +LLS M +RG+
Sbjct: 435 IKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD + Y ++I   C    +++A  L   + ++   PN   +T LI G C+ G VD+A  
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +  KM    C P+   FNALI GLC  G+L++A LL  KM +IG  PT+           
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV----------- 602

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
              ++   ++ +    G    AY    Q+  SG  PD  TY + I  +C+ G +  A  +
Sbjct: 603 ---STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY----KSLMT 574
             +++  G+ PD  TY +LI G   + +   AF +  +M   GC PS   +    K L+ 
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719

Query: 575 WSCRRRKFS----LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA------IQGLL 624
               ++K S     A S  +++        D  ++ +E+ ++     NA      I G+ 
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEF--------DTVVELLEKMVEHSVTPNAKSYEKLILGIC 771

Query: 625 EM----------DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           E+          D    +  ++P    +   L   C+  +  EA  +   ++    +   
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            SC  LI GL K+G  +    VF   L+ G+
Sbjct: 832 ESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 258/549 (46%), Gaps = 53/549 (9%)

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++ L +    DE  +++++M +    P+   YN ++NG+CKL  V+EA   +    
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +Y+ LI G  + K  D A+  + +M  +    + V Y  +I GL  A ++ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +AM L   M++    P    Y  LIK  C      +A +L  E+ +    PN HT+T+LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C     + A++L  +M + G  P+V  +NALI+G CK G +E A  +   ME     
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES---- 421

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
               R      R +++     +++ YC +  +HKA  +L ++ E   LPD++TYNSLI+G
Sbjct: 422 ----RKLSPNTRTYNE-----LIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ GN + A +L   +  +GL PD  TY ++I+ L +  R E+A  +F  + Q G  P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
             +Y +L+   C+                  +G+ DE+   +E+ L K  + N++     
Sbjct: 532 VVMYTALIDGYCK------------------AGKVDEAHLMLEKMLSKNCLPNSLT---- 569

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       +   + GLC DG++KEA  +   +V+     T  +   LIH L K G 
Sbjct: 570 ------------FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            D A   F   L +G   +P    Y      + ++ + + A  ++ +M+  G   D   Y
Sbjct: 618 FDHAYSRFQQMLSSG--TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675

Query: 746 PKTKSLLPG 754
               SL+ G
Sbjct: 676 ---SSLIKG 681



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 228/505 (45%), Gaps = 35/505 (6%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  +S  +  +  LI GY K  +  KA+    KM E    PDV  YN++++   R   
Sbjct: 419 MESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F  A  +   M     +P+  T++ +I+ L KS + E A  + D + Q+G+ PN   YT 
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C+  + DEA+ +  KM    C P+ + +NAL++G C   ++ EA  L     K G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P + + + LI  L +   +D AY+ +++M     +PD   Y   I+     G++ DA 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI--- 385
            +++ MRE G+ PD + Y++LIKG+ DLG  + A  +   +      P+ HTF  LI   
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717

Query: 386 ---------------CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                          C M      D   +L  KM +    P+   +  LI G+C+ G L 
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777

Query: 431 KANLLFYKMEI--GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            A  +F  M+   G +P+  +                 ++   C     ++A K++  + 
Sbjct: 778 VAEKVFDHMQRNEGISPSELV--------------FNALLSCCCKLKKHNEAAKVVDDMI 823

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G+LP + +   LI G  K G       +F+ L   G   D + +  +I+G+ +    E
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE 883

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLM 573
             + +F  M +NGC  S   Y  L+
Sbjct: 884 AFYELFNVMEKNGCKFSSQTYSLLI 908



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 178/420 (42%), Gaps = 19/420 (4%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           ++ N    +R       R  +    + +++I  L K    +      D L    V+    
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI GY K G  ++A     KM   +C P+   +NA+++          A  +  +M
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK+   P + T ++LI+ L K G  + A     +M   G  P+  TYT  I   C+  R 
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  +  KM+++G SPD   Y++L+ G+  L + + A  +L+     G  P   ++  L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713

Query: 280 IDGLFRAK------------------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           I  L   K                   +D       KM E  + P+   Y  +I G+ E 
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773

Query: 322 GKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           G ++ A K+   M R  GI P    +NAL+   C L   ++A  +  ++     LP   +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             +LICG+ + G  +    +F  + + G +     +  +IDG+ K G +E    LF  ME
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 142/310 (45%), Gaps = 19/310 (6%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + ++++ +I  LLK   FD  +    ++ S      +  +   I  Y + G    A +  
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL--S 179
            KM+E    PD++ Y++++           A  V   M    C P+  TF  LI  L   
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720

Query: 180 KSGKT----------------EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           K GK                 +  +++L++M +  + PN  +Y  +I G+C++     A 
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780

Query: 224 RLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           ++F  M ++ G SP  + +NALL+  CKL++ +EA  ++      G +P+L S   LI G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L++    +   + ++ + +     D + + ++I G+ + G V+   +L + M + G    
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900

Query: 343 TYCYNALIKG 352
           +  Y+ LI+G
Sbjct: 901 SQTYSLLIEG 910


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 309/651 (47%), Gaps = 31/651 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN---CLPNIVTFSLLINGLS 179
           +M E  C PD   Y  +L     ++    AL + + M   +   C PN+V++S++ING  
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFF 210

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
             G+ +    +  EM  RGI P+  TYT VI GLC+    D A  +F +M D+G  P+  
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+  + +  E + +L      G  P   +Y  L++ L +  R  EA  ++  M
Sbjct: 271 TYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM 330

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + I+P V  YG++I G +  G + +    L  M E G+ PD + +N     +   G++
Sbjct: 331 IRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 390

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D+A  +  ++ +    PN   +  LI  +C+ G VDDA+  FN+M   G  P++ +FN+L
Sbjct: 391 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 450

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           + GLC   + E+A  L Y+M           L QG     +     T++   C  G + +
Sbjct: 451 VYGLCTVDKWERAEELVYEM-----------LDQG--ICPNAVFFNTLICNLCNVGRVME 497

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
             +++  +   G  PD  +Y  LI+G+C  G  + A K+F  +   GL P  VTY TL++
Sbjct: 498 GRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 557

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G     R +DA+ +F +M + G TP    Y +++    + ++FS A  L+L  +   +  
Sbjct: 558 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC 617

Query: 600 DDESMKSIEEFLQKG----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
           D  +   I   L K     E     Q L     +LN   +  +TI +  L + G+ ++A+
Sbjct: 618 DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN---IITFTIMIGALLKGGRKEDAM 674

Query: 656 NIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           ++F+  +    +V      +L+   L + G L+    +F    KNG     ++ N L+R 
Sbjct: 675 DLFAA-IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
           LL   D  +  AY  L ++    + ++A     T SLL   + + E ++ +
Sbjct: 734 LLHRGDISRAGAY--LSKLDERNFSVEA----STTSLLMSIFTSDEYQHHA 778



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 248/512 (48%), Gaps = 24/512 (4%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           L+    D  R    +VVS  + ++I+G++  G  +K    F +M +    PDV  Y  V+
Sbjct: 184 LHMMADDHGRRCPPNVVS--YSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVI 241

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   + QLF  A  V+ +M+     PN  T++ LI+G    GK +  ++ML+EM+ RG+ 
Sbjct: 242 DGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLK 301

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ +TY  +++ LC+  R  EA   F  M   G  P    Y  L++G+     + E  + 
Sbjct: 302 PDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSF 361

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    ++G  P    ++       +    D+A   + KM +  + P+VV YG +I  L +
Sbjct: 362 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 421

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+V DA    + M   G+ P+   +N+L+ G C +   ++A  L  E+  +   PN   
Sbjct: 422 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 481

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           F  LIC +C  G V + ++L + ME  G  P    +  LI G C  G  ++A  +F  M 
Sbjct: 482 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV 541

Query: 440 EIGKNPT--LFLRLSQG---GNRVHDKASL-QTMVEQYCTAGLI---------------H 478
            IG +PT   +  L  G    +R+ D   L + M+ +  T G++                
Sbjct: 542 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 601

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A ++ + +  SG   DI TYN ++NG CK   ++ A K+F+ L  KGL+ + +T+  +I
Sbjct: 602 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 661

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
             L +  R+EDA  +F  +P NG  P+   Y+
Sbjct: 662 GALLKGGRKEDAMDLFAAIPANGLVPNVVTYR 693



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 260/588 (44%), Gaps = 42/588 (7%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSK---SGKTEVAIKMLDEMTQR---GILPNKFT 205
           AL ++ E++      ++  F+ L+  +S+   S  +E+A+   + M +     + PN  T
Sbjct: 33  ALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCT 92

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-ALLRSF 264
           Y+I+I   C++   +  +  F  +  +G   D +A N LL G C  +RV EA+  LL+  
Sbjct: 93  YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRM 152

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE---KIEPDVVLYGVMIRGLSEA 321
            + G +P   SY+ L+ GL   KR +EA      M ++   +  P+VV Y ++I G    
Sbjct: 153 PELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTE 212

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+V     L  +M +RGI PD   Y  +I G C   L D+A  +  ++      PN +T+
Sbjct: 213 GQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY 272

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
             LI G    G   +  ++  +M   G  P    + +L++ LCK G   +A   F  M  
Sbjct: 273 NCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR 332

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P +              ++   ++  Y T G + + +  L  + E+G  PD   +N
Sbjct: 333 KGIKPKV--------------STYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
              + + K G I+ A+ +F +++  GL P+ V YG LI+ L ++ R +DA   F QM   
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 438

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-----GE 615
           G TP+  V+ SL+   C   K+  A  L  + L       D+ +     F          
Sbjct: 439 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEML-------DQGICPNAVFFNTLICNLCN 491

Query: 616 VENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           V   ++G   +D  +    + P    YT  + G C  G+  EA  +F  +V      T  
Sbjct: 492 VGRVMEGRRLIDL-MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEV 550

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           +   L+HG C    +D A  +F   L+ G        N +L  L  +K
Sbjct: 551 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 598



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 188/399 (47%), Gaps = 3/399 (0%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           RFF  +  RK ++   S   ++       G        LD +    +S    +F +  S 
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           Y K G  +KA++ F KM++    P+V  Y A+++   +      A   + +M+     PN
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           IV F+ L+ GL    K E A +++ EM  +GI PN   +  +I  LC + R  E  RL  
Sbjct: 444 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLID 503

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M+  G  PD  +Y  L++G+C   R DEA  +       G  P   +Y+ L+ G   A 
Sbjct: 504 LMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 563

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D+AY  +R+M  + + P VV Y  ++ GL +  +  +A +L  +M   G   D Y YN
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            ++ G C    +D+A  +   +  +    N  TFTI+I  + + G  +DA  LF  +   
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G  P+V  +  + + L + G LE+ + LF  ME  KN T
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME--KNGT 720



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 99/222 (44%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   +  D + S  +S     +  L+ GY      + A   F +M      P V  YN +
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           L+  F+ + F  A  +Y  M+      +I T+++++NGL KS   + A KM   +  +G+
Sbjct: 591 LHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 650

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             N  T+TI+I  L +  R ++A  LF  +  +G  P+ V Y  +     +   ++E  +
Sbjct: 651 QLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDS 710

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           L  + EK+G  P     + L+  L        A A+  K+ E
Sbjct: 711 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 752


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 227/421 (53%), Gaps = 13/421 (3%)

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           AV  EM K    P++VT +++++   ++G  E A+ ++D M  +G+ P   TY  V+ GL
Sbjct: 116 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 175

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+    D+A+ +F +M D G +PD  ++  L+ GFC++  ++EAL + +     G  P L
Sbjct: 176 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 235

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            S+SCLI    R  + D A A+ R+M    + PD V+Y ++I G   AG + DA+++  +
Sbjct: 236 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 295

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G +PD   YN L+ G C    L  A  L  E+ +R   P+  TFT LI G C  G 
Sbjct: 296 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 355

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +D A +LF+ M      P +  +N LIDG+C+ G+L+KAN L+  M    +  +F     
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH---SREIF----- 407

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 +  +   +++ +C  G +  A+  L ++   G LP+I+TYNS+I G+C+ GN++
Sbjct: 408 -----PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 462

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
              K  +++ +  + PD +TY TLI+G  + D+  DAF++   M +    P    Y  L+
Sbjct: 463 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 522

Query: 574 T 574
            
Sbjct: 523 N 523



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 278/572 (48%), Gaps = 24/572 (4%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           S N  V +    +++  Y K  + +K      +M++    PDV  +N +++  FR     
Sbjct: 88  SSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAE 147

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A+A+   MV     P IVT++ ++ GL +SG  + A ++  EM   G+ P+  ++TI+I
Sbjct: 148 AAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILI 207

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G C++   +EA +++ +M+  G  PD V+++ L+  F +  ++D A+A LR     G V
Sbjct: 208 GGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLV 267

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P    Y+ +I G  RA    +A     +M      PDVV Y  ++ GL +  ++ DA  L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L++MRERG+ PD   +  LI G+C  G LD+A  L   +  +   P+  T+  LI GMCR
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFL 449
            G +D A  L++ M     FP+   ++ LID  C+ G++E A   L   +  G  P +  
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM- 446

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  ++++ YC +G + K  K L ++  +   PD+ITYN+LI+G+ K 
Sbjct: 447 -------------TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             ++ A KL   ++ + ++PD VTY  LING       ++A  IF +M   G  P    Y
Sbjct: 494 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            S++           AF L  + L+   G++        +F+    ++N+ + L +M   
Sbjct: 554 MSMINGHVTAGNSKEAFQLHDEMLQ--RGKEKRRAAGTVQFVN---IQNSAESLKQMPMD 608

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           L        +I+     Q+  ++    +F  L
Sbjct: 609 LK----VTCSIYFFAKTQEFAIRGCAFVFGAL 636



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 219/426 (51%), Gaps = 15/426 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V+  L +   +D  W+   E+    V+     F +LI G+ +VG+ E+AL+ + +M+ 
Sbjct: 169 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 228

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+  ++ ++ +  R+     A+A   EM     +P+ V ++++I G  ++G    
Sbjct: 229 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 288

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ DEM   G LP+  TY  +++GLC+  R  +A  L  +M++ G  PD   +  L++
Sbjct: 289 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 348

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C   ++D+AL L  +       P + +Y+ LIDG+ R    D+A   +  M   +I P
Sbjct: 349 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 408

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y ++I    E G+V+DA   L +M  +GI+P+   YN++IKG+C  G + + +   
Sbjct: 409 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 468

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++      P+  T+  LI G  +   + DA KL N MEK    P V  +N LI+G    
Sbjct: 469 QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVH 528

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A  +F KM   G  P              D+ +  +M+  + TAG   +A+++  
Sbjct: 529 GNVQEAGWIFEKMCAKGIEP--------------DRYTYMSMINGHVTAGNSKEAFQLHD 574

Query: 486 QLAESG 491
           ++ + G
Sbjct: 575 EMLQRG 580



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 200/467 (42%), Gaps = 49/467 (10%)

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++    +A  +D+  A   +M +  + PDVV + VM+     AG  + AM L+  M  +G
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    YN+++KG C  G+ D+A  +  E+      P+  +FTILI G CR G +++A 
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           K++ +M   G  P +  F+ LI    + G+++ A               +LR  +    V
Sbjct: 221 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA-------------MAYLREMRCFGLV 267

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D      ++  +C AGL+  A ++  ++   G LPD++TYN+L+NG CK   +  A  L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             E++ +G+ PD  T+ TLI+G     + + A ++F  M      P    Y +L+   CR
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
           +     A  LW            + M S E F                           Y
Sbjct: 388 QGDLDKANDLW------------DDMHSREIFPNH----------------------VTY 413

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           +I +   C+ GQV++A      ++    +    +   +I G C+ G +          + 
Sbjct: 414 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 473

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           N   + P +  Y      + K++K   A+ LL  M+      D   Y
Sbjct: 474 NK--VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 169/346 (48%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
             S S +I +  +    D     L E+R   +     ++ ++I G+ + G    AL    
Sbjct: 235 LVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRD 294

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M    C PDV  YN +LN   +++  L A  +  EM +    P++ TF+ LI+G    G
Sbjct: 295 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 354

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+++ D M  + + P+  TY  +I G+C+    D+A  L+  M      P+ V Y+
Sbjct: 355 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 414

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++  C+  +V++A   L      G +P + +Y+ +I G  R+    +   + +KM   
Sbjct: 415 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 474

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           K+ PD++ Y  +I G  +  K+ DA KLL+ M +  + PD   YN LI GF   G + +A
Sbjct: 475 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +  ++  +   P+ +T+  +I G    G   +A +L ++M + G
Sbjct: 535 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 16/327 (4%)

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           ++  +S  NT+T  I++   C+    D    + ++MEK   FP V   N ++D   +AG+
Sbjct: 86  VFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGD 145

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            E A  L   M   G  P +               +  ++++  C +G+  KA+++  ++
Sbjct: 146 AEAAMALVDSMVSKGLKPGI--------------VTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G  PD+ ++  LI GFC+VG I  ALK++KE++ +G++PD V++  LI    R  + 
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           + A     +M   G  P   +Y  ++   CR    S A  +  + +      D  +  ++
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 608 EEFLQKGEVENAIQGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
              L K       +GLL EM  +     L  +T  + G C +G++ +AL +F  ++  + 
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                +   LI G+C++G LD A D++
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLW 398


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/421 (32%), Positives = 227/421 (53%), Gaps = 13/421 (3%)

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           AV  EM K    P++VT +++++   ++G  E A+ ++D M  +G+ P   TY  V+ GL
Sbjct: 177 AVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGL 236

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+    D+A+ +F +M D G +PD  ++  L+ GFC++  ++EAL + +     G  P L
Sbjct: 237 CRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDL 296

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            S+SCLI    R  + D A A+ R+M    + PD V+Y ++I G   AG + DA+++  +
Sbjct: 297 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 356

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G +PD   YN L+ G C    L  A  L  E+ +R   P+  TFT LI G C  G 
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +D A +LF+ M      P +  +N LIDG+C+ G+L+KAN L+  M    +  +F     
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH---SREIF----- 468

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 +  +   +++ +C  G +  A+  L ++   G LP+I+TYNS+I G+C+ GN++
Sbjct: 469 -----PNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVS 523

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
              K  +++ +  + PD +TY TLI+G  + D+  DAF++   M +    P    Y  L+
Sbjct: 524 KGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLI 583

Query: 574 T 574
            
Sbjct: 584 N 584



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 234/463 (50%), Gaps = 15/463 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           V++   ++ GD E A+     M     +P +  YN+VL    R  ++  A  V+ EM   
Sbjct: 196 VMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDF 255

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++ +F++LI G  + G+ E A+K+  EM  RGI P+  +++ +I    +  + D A
Sbjct: 256 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 315

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
                +M+  G  PD V Y  ++ GFC+   + +AL +       G +P + +Y+ L++G
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + +R  +A     +M E  + PD+  +  +I G    GK+  A++L   M  + + PD
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C  G LD+A  L  ++  R+  PN  T++ILI   C  G V+DA    +
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDK 461
           +M   G  P++  +N++I G C++G + K      KM + K +P L              
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI------------- 542

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  Y     +H A+K+L  + +    PD++TYN LINGF   GN+  A  +F++
Sbjct: 543 -TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           +  KG+ PD  TY ++ING       ++AF++  +M Q G  P
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 221/430 (51%), Gaps = 15/430 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V+  L +   +D  W+   E+    V+     F +LI G+ +VG+ E+AL+ + +M+ 
Sbjct: 230 NSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 289

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+  ++ ++ +  R+     A+A   EM     +P+ V ++++I G  ++G    
Sbjct: 290 RGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSD 349

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ DEM   G LP+  TY  +++GLC+  R  +A  L  +M++ G  PD   +  L++
Sbjct: 350 ALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIH 409

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C   ++D+AL L  +       P + +Y+ LIDG+ R    D+A   +  M   +I P
Sbjct: 410 GYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 469

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y ++I    E G+V+DA   L +M  +GI+P+   YN++IKG+C  G + + +   
Sbjct: 470 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 529

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++      P+  T+  LI G  +   + DA KL N MEK    P V  +N LI+G    
Sbjct: 530 QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVH 589

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A  +F KM   G  P              D+ +  +M+  + TAG   +A+++  
Sbjct: 590 GNVQEAGWIFEKMCAKGIEP--------------DRYTYMSMINGHVTAGNSKEAFQLHD 635

Query: 486 QLAESGNLPD 495
           ++ + G  PD
Sbjct: 636 EMLQRGFAPD 645



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 211/469 (44%), Gaps = 18/469 (3%)

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++    +A  +D+  A   +M +  + PDVV + VM+     AG  + AM L+  M  +G
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    YN+++KG C  G+ D+A  +  E+      P+  +FTILI G CR G +++A 
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           K++ +M   G  P +  F+ LI    + G+++ A               +LR  +    V
Sbjct: 282 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA-------------MAYLREMRCFGLV 328

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D      ++  +C AGL+  A ++  ++   G LPD++TYN+L+NG CK   +  A  L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             E++ +G+ PD  T+ TLI+G     + + A ++F  M      P    Y +L+   CR
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 579 RRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +     A  LW   + R+I          I+   +KG+VE+A   L EM  K     +  
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF-LYT 696
           Y   + G C+ G V +       ++  K      +   LIHG  K    D   D F L  
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE---DKMHDAFKLLN 565

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +     ++P V  Y +    FS       A  +  +M + G + D   Y
Sbjct: 566 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 614



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 170/349 (48%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
             S S +I +  +    D     L E+R   +     ++ ++I G+ + G    AL    
Sbjct: 296 LVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRD 355

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M    C PDV  YN +LN   +++  L A  +  EM +    P++ TF+ LI+G    G
Sbjct: 356 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 415

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+++ D M  + + P+  TY  +I G+C+    D+A  L+  M      P+ V Y+
Sbjct: 416 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++  C+  +V++A   L      G +P + +Y+ +I G  R+    +   + +KM   
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           K+ PD++ Y  +I G  +  K+ DA KLL+ M +  + PD   YN LI GF   G + +A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             +  ++  +   P+ +T+  +I G    G   +A +L ++M + G  P
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 258/503 (51%), Gaps = 27/503 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F +L+  Y ++    +ALE F  +KE    P++   N +L++  +     +A  +Y EM
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++N   ++ TF+++IN L K GK + A + +  M   G+ PN  TY  +I G C   + 
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  +F  MKD G  PD   YN+ ++G CK  R++EA  L+    + G VP   +Y+ L
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG       D+AYA+  +M  + I   +V Y + I  L   G++ DA  ++ +MRE+G+
Sbjct: 328 IDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGM 387

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD   +N LI G+C  G   +A  L  E+  +   P   T+T LI  + +   + +A  
Sbjct: 388 MPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF+K+++ G  P + +FNALIDG C  G +++A  L  +M+  K              + 
Sbjct: 448 LFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK-------------VLP 494

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D+ +  T+++ YC  G + +A ++L ++   G  PD I+YN+LI+G+ K G++  A ++ 
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVR 554

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+   G  P  +TY  LI GL +    E A  +  +M   G TP  + Y S++      
Sbjct: 555 DEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIE----- 609

Query: 580 RKFSLAFSLWLQYLRDISGRDDE 602
                     ++ + D+ G DD+
Sbjct: 610 ---------AMETVDDLEGNDDK 623



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 231/466 (49%), Gaps = 26/466 (5%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           F LL+    +  K   A++    + ++G +PN  T   ++S   ++NR   A+ L+ +M 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                     +N ++N  CK  ++ +A   +   E  G  P + +Y+ +I G     ++ 
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A   ++ M ++ +EPD   Y   I GL + G++++A  L+  M E G+VP+   YNALI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G+C+ G LD+A + + E+  +  + +  T+ + I  +   G + DA  +  +M + G  
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGK--NPTL--------------------- 447
           P     N LI+G C+ G+ ++A  L  +M +GK   PTL                     
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEM-VGKGIQPTLVTYTSLIYVLGKRNRMKEADA 447

Query: 448 -FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            F ++ Q G  + D      +++ +C  G I +A+++L ++     LPD ITYN+L+ G+
Sbjct: 448 LFSKIQQEG-LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGY 506

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G +  A +L  E++ +G++PD ++Y TLI+G  +    +DAFR+  +M   G  P+ 
Sbjct: 507 CREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTI 566

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
             Y +L+   C+ ++   A  L  + +      DD +  SI E ++
Sbjct: 567 LTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAME 612



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 232/504 (46%), Gaps = 48/504 (9%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           K P      F    ++  + +  + + ++S+ LK N   + W    E+   N+      F
Sbjct: 160 KKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTF 219

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            ++I+   K G  +KA E  G M+    +P+V  YN +++    +  F  A  ++  M  
Sbjct: 220 NIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD 279

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P+  T++  I+GL K G+ E A  ++ +M + G++PN  TY  +I G C     D+
Sbjct: 280 KGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDK 339

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           AY    +M   G     V YN  ++      R+ +A  +++   + G +P   +++ LI+
Sbjct: 340 AYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILIN 399

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  R      A+    +M  + I+P +V Y  +I  L +  ++K+A  L S +++ G++P
Sbjct: 400 GYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP 459

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   +NALI G C  G +D+A  L  E+     LP+  T+  L+ G CR G V++A++L 
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           ++M++ G  P    +N LI G  K G+++ A                             
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDA----------------------------- 550

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                              +++  ++  +G  P I+TYN+LI G CK      A +L KE
Sbjct: 551 -------------------FRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKE 591

Query: 522 LQLKGLRPDSVTYGTLINGLQRVD 545
           +  KG+ PD  TY ++I  ++ VD
Sbjct: 592 MVSKGITPDDSTYLSIIEAMETVD 615



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 210/468 (44%), Gaps = 39/468 (8%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            +++ +++R   E  K  +A++    ++E+G VP+    N ++  F  L     A  L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+++ +   + +TF I+I  +C+ G +  A++    ME  G  P+V  +N +I G C  G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 428 ELEKANLLFYKM-EIGKNPTLFL------------RLSQG---------GNRVHDKASLQ 465
           + ++A ++F  M + G  P  +             RL +          G  V +  +  
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ YC  G + KAY    ++   G +  ++TYN  I+     G +  A  + KE++ K
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+ PD+VT+  LING  R    + AF +  +M   G  P+   Y SL+    +R +   A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 586 FSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTI 640
            +L+ +  ++    D     + I+     G ++ A Q L EMD    + ++ P    Y  
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD----NMKVLPDEITYNT 501

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTL 697
            + G C++G+V+EA  +   L E K     P  +    LI G  KRG +  A  V    +
Sbjct: 502 LMQGYCREGKVEEARQL---LDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             GF       N L++ L   K+ +  HA  LL  M S G   D   Y
Sbjct: 559 TTGFDPTILTYNALIQGL--CKNQEGEHAEELLKEMVSKGITPDDSTY 604


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/572 (29%), Positives = 274/572 (47%), Gaps = 86/572 (15%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA +Y MV++N  P++V F   +   +K  +    + + ++M    +  N ++  I+I+
Sbjct: 77  ALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILIN 136

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC++N  D +  +  KM   G  PD + +NAL+NG C   ++ EA+ L     K G  P
Sbjct: 137 CLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEP 196

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + SY+ +I+GL +      A   ++KM +   +P+VV Y  +I  L +   V DAM+ L
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL 256

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M ERGI P+ + YN+++ GFC+LG L++A  L  E+  RD +PNT TFTIL+ G+C+ 
Sbjct: 257 SEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKE 316

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           GMV +A+ +F  M + G  P +  +NAL+DG C                           
Sbjct: 317 GMVSEARLVFETMTEKGVEPDISTYNALMDGYC--------------------------- 349

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                       LQ          L+++A K+   +   G  P   +YN LING+CK   
Sbjct: 350 ------------LQR---------LMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A  L  E+  K L PD+VTY TL+ GL ++ R ++A  +F +M   G  P+   Y  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+                   G  DE++K ++   +K    N +           
Sbjct: 449 LLDGFCKH------------------GHLDEALKLLKSMKEKKLEPNIVH---------- 480

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YTI + G+   G+++ A  +FS L          +   +I GL K G  D A D
Sbjct: 481 ------YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDN 721
           +F     +GF+  P  C+Y  +++  L ++D+
Sbjct: 535 LFRKMEDDGFL--PNSCSYNVMIQGFLQNQDS 564



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 242/467 (51%), Gaps = 15/467 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F    +VY  N ++N   R      +++V  +M KL   P+ +TF+ LINGL   G
Sbjct: 118 QMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEG 177

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+++ +EM +RG  PN  +YT VI+GLC+      A  +F KM+ +GC P+ V Y+
Sbjct: 178 KIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYS 237

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++  CK R V++A+  L    + G  P + +Y+ ++ G     + +EA   +++M   
Sbjct: 238 TIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR 297

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + P+ V + +++ GL + G V +A  +   M E+G+ PD   YNAL+ G+C   L+++A
Sbjct: 298 DVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEA 357

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           + +   + ++   P  H++ ILI G C++  +D+A+ L  +M      P    ++ L+ G
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LC+ G  ++A  LF +M   G +P L               +   +++ +C  G + +A 
Sbjct: 418 LCQLGRPKEALNLFKEMCSYGPHPNL--------------VTYVILLDGFCKHGHLDEAL 463

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+L  + E    P+I+ Y  LI G    G +  A +LF +L   G RPD  TY  +I GL
Sbjct: 464 KLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGL 523

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +    ++A+ +F +M  +G  P+   Y  ++    + +  S A  L
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 265/536 (49%), Gaps = 16/536 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M   + +P V  +   L    +K+ +   +++  +M       N+ + ++L
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +    + ++ +L +M + GI P+  T+  +I+GLC   +  EA  LF +M   G 
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ ++Y  ++NG CK      A+ + +  E++G  P + +YS +ID L + +  ++A  
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +  +M E  I P+V  Y  ++ G    G++ +A +L  +M  R ++P+T  +  L+ G C
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++ +AR +   + ++   P+  T+  L+ G C   ++++A+K+F  M + GC P   
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI+G CK+  +++A  L  +M     NP              D  +  T+++  C 
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNP--------------DTVTYSTLMQGLCQ 420

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G   +A  +  ++   G  P+++TY  L++GFCK G+++ ALKL K ++ K L P+ V 
Sbjct: 421 LGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVH 480

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI G+    + E A  +F ++  +G  P    Y  ++    +      A+ L+ +  
Sbjct: 481 YTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            D    +  S    I+ FLQ  +   AI+ + EM  K     L+ + + L    QD
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 596



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 239/471 (50%), Gaps = 13/471 (2%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I+ L + N  D     L ++    +   +  F  LI+G    G  ++A+E F +M +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+V  Y  V+N   +     +A+ V+ +M +  C PN+VT+S +I+ L K      A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           + L EM +RGI PN FTY  ++ G C + + +EA RLF +M      P+ V +  L++G 
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK   V EA  +  +  + G  P + +Y+ L+DG    +  +EA   +  M  +   P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y ++I G  ++ ++ +A  LL++M  + + PDT  Y+ L++G C LG   +A +L  E
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN  T+ IL+ G C++G +D+A KL   M++    P++  +  LI+G+  AG+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           LE A  LF K        LF     G     D  +   M++     GL  +AY +  ++ 
Sbjct: 494 LEVAKELFSK--------LF-----GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKME 540

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           + G LP+  +YN +I GF +  + + A++L  E+  K    +  T+  L++
Sbjct: 541 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 239/514 (46%), Gaps = 32/514 (6%)

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           FV+ N+  N  C    VD+ALA      +    P +  +   +    + K+Y    +   
Sbjct: 64  FVSNNS--NNVC----VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCN 117

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M   ++  +V    ++I  L     V  ++ +L  M + GI PD   +NALI G C+ G
Sbjct: 118 QMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEG 177

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            + +A  L  E+ KR   PN  ++T +I G+C+ G    A  +F KME+ GC P+V  ++
Sbjct: 178 KIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYS 237

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            +ID LCK   +  A     +M E G  P +F              +  ++V  +C  G 
Sbjct: 238 TIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF--------------TYNSIVHGFCNLGQ 283

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +++A ++  ++     +P+ +T+  L++G CK G ++ A  +F+ +  KG+ PD  TY  
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343

Query: 537 LING--LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
           L++G  LQR+  E  A ++F  M + GC P    Y  L+   C+ R+   A SL  +   
Sbjct: 344 LMDGYCLQRLMNE--AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401

Query: 595 DISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                D  +  ++ + L Q G  + A+    EM        L  Y I L G C+ G + E
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--L 711
           AL +   + E K          LI G+   G L++A ++F     +G   RP +  Y  +
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG--TRPDIRTYTVM 519

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++ LL  K+     AY L  +M+  G+  ++C Y
Sbjct: 520 IKGLL--KEGLSDEAYDLFRKMEDDGFLPNSCSY 551



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 155/385 (40%), Gaps = 60/385 (15%)

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILI 385
           A +L     E GI P        +  F      +    L     K+ SLP N   F   +
Sbjct: 16  AFQLQQQQMEMGISP-------FLPDFPCFLFFNHHHFLTSTSTKKPSLPKNNDGF---V 65

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
                N  VDDA   F +M +    PSV  F   +    K  +      L  +M++    
Sbjct: 66  SNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL---- 121

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
               R++      H+  SL  ++   C    +  +  +L ++ + G  PD IT+N+LING
Sbjct: 122 ---FRVT------HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALING 172

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C  G I  A++LF E+  +G  P+ ++Y T+INGL +      A  +F +M QNGC P+
Sbjct: 173 LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y +++   C+ R                    +++M+ + E +++G   N       
Sbjct: 233 VVTYSTIIDSLCKDRLV------------------NDAMEFLSEMVERGIPPNVFT---- 270

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       Y   + G C  GQ+ EA  +F  +V    +    +   L+ GLCK G 
Sbjct: 271 ------------YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGM 318

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNY 710
           +  A  VF    + G  + P +  Y
Sbjct: 319 VSEARLVFETMTEKG--VEPDISTY 341


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 194/748 (25%), Positives = 330/748 (44%), Gaps = 78/748 (10%)

Query: 27  PFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQT 85
           P L    V +V+   KNP      F    K    + +  +   +I  L     F+   + 
Sbjct: 3   PALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEV 62

Query: 86  LDELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           L E R   +  ++  V+   +  Y + G  ++A++ F +M  F+C+P V  YNA++NI  
Sbjct: 63  LAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILV 122

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
             + F  A  VY  M     +P++ TF++ +    ++ +   A ++L+ M  +G   +  
Sbjct: 123 EYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAV 182

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN------------------ 246
            Y  VI G  + N   EA+ LF +M   G  PD +A+N L++                  
Sbjct: 183 AYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV 242

Query: 247 -----------------GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
                            GFC+   ++EA+ LL    + G  P + +Y+ LI GL +  + 
Sbjct: 243 LKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKV 301

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA  + RKM  E  EPD   Y  +I G  + G +++A ++L D   +G VPD   Y +L
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G C  G +D+A ++  E  ++   PN      L+ G+ + G++  A KL N+M + GC
Sbjct: 362 INGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGC 421

Query: 410 FPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P +  +N +I+GLCK G +  A NL+   +  G  P +F              +  T++
Sbjct: 422 SPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVF--------------TFNTLI 467

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + YC    +  A +I+ ++   G  PD+ITYNS++NG CK G     +  FK +  KG  
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV 527

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P+ +TY  L     +  + E+A  +  +M   G TP    + +LM   C       A+ L
Sbjct: 528 PNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQL 587

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF------KLNDFQLAP----Y 638
           +         R DE  K          + NA  G L M+       K+ +   +P    Y
Sbjct: 588 F--------KRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
            + + G C+ G +    +   V +E   I +  +  ++++ LC +  +  A+ +    + 
Sbjct: 640 RVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVH 699

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            G +  P V N      +F  D K+V A
Sbjct: 700 KGIV--PEVVN-----TIFEADKKEVAA 720



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 159/360 (44%), Gaps = 23/360 (6%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A  +F +M+   C PSV  +NA+++ L +    ++A+             +++
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAH------------KVYM 135

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R+   G  V D  +    ++ +C     H A ++L  +   G     + Y ++I GF + 
Sbjct: 136 RMRDKG-IVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            +   A +LF+E+   G+ PD + +  LI+ L R    +++ R+  ++ + G +P+    
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG----EVENAIQGLLE 625
              +   C+R   + A  L     R ++  D  +  ++   L K     E E+ ++ ++ 
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDGVGRGLT-PDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
             ++ + F    Y   + G C+ G ++ A  I         +    +   LI+GLC+ G 
Sbjct: 314 EGYEPDGFT---YNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +D A++VF   ++ G      +CN L++ L  S+    + A  L+  M   G   D   Y
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGL--SQQGLILQALKLMNEMSENGCSPDIWTY 428


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/591 (28%), Positives = 271/591 (45%), Gaps = 58/591 (9%)

Query: 45  QVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
                 F W   +K  R SF     +I  L     F    + L +++   +     +F  
Sbjct: 86  STSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFIS 145

Query: 104 LISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++  Y K G   +      +M+  + C+P    YN VL I        +A  V+Y+M+  
Sbjct: 146 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 205

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P + TF +++  L    + + A+ +L +MT+ G +PN   Y  +I  L + NR +EA
Sbjct: 206 KIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 265

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +L  +M   GC PD   +N ++ G CK  R++EA  ++      GF P   +Y  L++G
Sbjct: 266 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNG 325

Query: 283 LFRAKRYDEA---------------------YAWYRKMFEEK-----------IEPDVVL 310
           L +  R D A                     +  + ++ + K           I PDV  
Sbjct: 326 LCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G  + G V  A+++L DMR +G  P+ Y Y  L+ GFC LG +D+A +L  E+ 
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                PNT  F  LI   C+   + +A ++F +M + GC P V  FN+LI GLC+  E++
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505

Query: 431 KA-----------------------NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
            A                       N    + EI +   L   +   G+ + D+ +  ++
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL-DEITYNSL 564

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C AG + KA  +  ++   G +P  I+ N LING C+ G +  A++  KE+ L+G 
Sbjct: 565 IKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGS 624

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            PD VT+ +LINGL R  R ED   +F ++   G  P    Y +LM+W C+
Sbjct: 625 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 261/544 (47%), Gaps = 45/544 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +L+  N   +      ++ S  +      F V++     V + + AL   
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVL 234

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  IY  +++   +      AL +  EM  + C+P+  TF+ +I GL K 
Sbjct: 235 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 294

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM------------ 229
            +   A KM++ M  RG  P+  TY  +++GLC+I R D A  LF ++            
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLI 354

Query: 230 --------------------KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                                  G  PD   YN+L+ G+ K   V  AL +LR     G 
Sbjct: 355 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGC 414

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + SY+ L+DG  +  + DEAY    +M  + ++P+ V +  +I    +  ++ +A++
Sbjct: 415 KPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 474

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  +M  +G  PD Y +N+LI G C++  +  A  L  ++     + NT T+  LI    
Sbjct: 475 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 534

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A+KL N+M   G       +N+LI GLC+AGE++KA  LF KM          
Sbjct: 535 RRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM---------- 584

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L  G   V    S   ++   C +G++ +A +   ++   G+ PDI+T+NSLING C+ 
Sbjct: 585 -LRDG--LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 641

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I   L +F++LQ +G+ PD+VTY TL++ L +     DA  +  +  ++G  P+   +
Sbjct: 642 GRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTW 701

Query: 570 KSLM 573
             L+
Sbjct: 702 SILL 705



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 226/476 (47%), Gaps = 20/476 (4%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            +I  L K N  +   Q L+E+        ++ F  +I G  K     +A +   +M   
Sbjct: 251 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 310

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              PD   Y  ++N   +      A  ++Y + K    P  V F+ LI+G    G+ + A
Sbjct: 311 GFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDA 366

Query: 188 IKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +L +M T  GI+P+  TY  +I G  +      A  +   M++ GC P+  +Y  L++
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCKL ++DEA  LL     DG  P    ++CLI    +  R  EA   +R+M  +  +P
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  +  +I GL E  ++K A+ LL DM   G+V +T  YN LI  F   G + +AR L 
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  + SL +  T+  LI G+CR G VD A+ LF KM + G  PS    N LI+GLC++
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRS 606

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +E+A     +M + G  P              D  +  +++   C AG I     +  
Sbjct: 607 GMVEEAVEFQKEMVLRGSTP--------------DIVTFNSLINGLCRAGRIEDGLTMFR 652

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +L   G  PD +TYN+L++  CK G +  A  L  E    G  P+  T+  L+  L
Sbjct: 653 KLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 253/531 (47%), Gaps = 32/531 (6%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD---EAYRLF 226
            + +LI  L  +G+ +   ++L +M   GI+   F  ++ IS +   ++A    +  RL 
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRLLMQMKDEGIV---FKESLFISIMRDYDKAGFPGQTTRLM 163

Query: 227 LKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           L+M++   C P F +YN +L           A  +          P L ++  ++  L  
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCA 223

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               D A +  R M +    P+ V+Y  +I  LS+  +V +A++LL +M   G VPD   
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 283

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N +I G C    +++A  +   +  R   P+  T+  L+ G+C+ G VD A+ LF ++ 
Sbjct: 284 FNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 343

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K    P+  +FN LI G    G L+ A  +   M                  V D  +  
Sbjct: 344 K----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI------------VPDVCTYN 387

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +++  Y   GL+  A ++L  +   G  P++ +Y  L++GFCK+G I+ A  L  E+   
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+P++V +  LI+   +  R  +A  IF +MP+ GC P    + SL++  C   +   A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507

Query: 586 FSLWLQYLRD-----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
             LWL  LRD     +          I  FL++GE++ A + + EM F+ +      Y  
Sbjct: 508 --LWL--LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
            + GLC+ G+V +A ++F  ++    + +  SC  LI+GLC+ G ++ A++
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVE 614



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 167/338 (49%), Gaps = 2/338 (0%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +V DV  +  LI GY+K G    ALE    M+   C+P+VY Y  +++   +      A 
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  EM      PN V F+ LI+   K  +   A+++  EM ++G  P+ +T+  +ISGL
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+++    A  L   M   G   + V YN L+N F +   + EA  L+      G +   
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI GL RA   D+A + + KM  + + P  +   ++I GL  +G V++A++   +
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  RG  PD   +N+LI G C  G ++   ++  ++      P+T T+  L+  +C+ G 
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           V DA  L ++  + G  P+   ++ L+  L     L++
Sbjct: 679 VYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 184/653 (28%), Positives = 309/653 (47%), Gaps = 35/653 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR--KQLFLLALAVYYEMVK 161
           L SG++++   + A++ FG M      P V  +  ++ +  R  +   +++L    EM++
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           + C  N  +F++L+       K   A+    ++T+ G  P   T+  ++ GLC  +R  E
Sbjct: 112 MPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISE 169

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  LF +M    C P+ V +  L+NG C+  RV EA+ALL    +DG  P   +Y  ++D
Sbjct: 170 ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225

Query: 282 GLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           G+ +      A    RKM E   I P+VV+Y  +I GL + G+  DA  L  +M+E+ I 
Sbjct: 226 GMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF 285

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I GFC  G    A  L  E+ +R   P+  TF+ LI    + G   +A++L
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           +++M      PS   ++++IDG CK   L+ A  +FY           L  ++G +   D
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY-----------LTPTKGCSP--D 392

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++  YC A  +    K+L ++ E+G + + ITY +LI+GFC+VG++N A  L +
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----------PQNGCTPSPAVY 569
           E+   G+ P+ VT  TL++GL    + +DA  +F  M           P NG  P    Y
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 570 KSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
             L+       KF  A  L+ +   R I          I+   ++  ++ A Q    M  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
           K     +  +   + G C+ G V + L +F  + +   +    + + LI+G  K   +D 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           A+D+F   + +G          +L   L+SK+  +     L     SVGY L+
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTG-LWSKEELERAVAMLEDLQMSVGYQLE 684



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 253/506 (50%), Gaps = 27/506 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +A+    +M E   QP+   Y  +++   +    + AL +  +M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            ++ + +PN+V ++ +I+GL K G+   A  +  EM ++ I P+  TY  +I+G C   R
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGR 303

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A +L  +M +   +PD V ++AL+N F K  +  EA  L         +P   +YS 
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG  +  R D A   +     +   PD++ +  +I G   A +V D +KLL +M E G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +V +T  Y  LI GFC +G L+ A+ L  E+      PN  T   L+ G+C NG + DA 
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483

Query: 399 KLFNKMEKA-----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           ++F  M+K+           G  P V  +N LI GL   G+  +A  L+ +M     P  
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEM-----PHR 538

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +        V D  +  +M++  C    + +A ++   +      PD++T+N+LI G+C
Sbjct: 539 GI--------VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++  L+LF E+  +G+  D++TY TLI G ++VD  + A  IF +M  +G  P   
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650

Query: 568 VYKSLMT--WSCRRRKFSLAFSLWLQ 591
             ++++T  WS    + ++A    LQ
Sbjct: 651 TIRNMLTGLWSKEELERAVAMLEDLQ 676



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 187/384 (48%), Gaps = 21/384 (5%)

Query: 77  NGFDLY--WQTLDEL------RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           NGF +   W   ++L      R  N  VV+  F  LI+ + K G   +A E + +M    
Sbjct: 296 NGFCISGRWSDAEQLLQEMLERKINPDVVT--FSALINAFVKEGKFFEAEELYDEMLPRS 353

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P    Y+++++   ++     A  ++Y      C P+I+TF+ LI G  ++ + +  I
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L EMT+ G++ N  TYT +I G CQ+   + A  L  +M  SG  P+ V  N LL+G 
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473

Query: 249 CKLRRVDEALALLRSFEK-----------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           C   ++ +AL + ++ +K           +G  P + +Y+ LI GL    ++ EA   Y 
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE 533

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M    I PD + Y  MI GL +  ++ +A ++   M  +   PD   +N LI G+C  G
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAG 593

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           ++D    L  E+ +R  + +  T+  LI G  +   +D A  +F +M  +G +P      
Sbjct: 594 MVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIR 653

Query: 418 ALIDGLCKAGELEKANLLFYKMEI 441
            ++ GL    ELE+A  +   +++
Sbjct: 654 NMLTGLWSKEELERAVAMLEDLQM 677



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L K +  D   Q  D + S + S     F  LI+GY K G  +  LE F +M +
Sbjct: 548 SSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQ 607

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                D   Y   L   FRK   +  AL ++ EM+     P+ +T   ++ GL    + E
Sbjct: 608 RGIVADAITY-ITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELE 666

Query: 186 VAIKMLDEM 194
            A+ ML+++
Sbjct: 667 RAVAMLEDL 675


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 268/524 (51%), Gaps = 47/524 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F V+I+G  +    ++A     +     C+PD   YN  ++   + +    A  +  +M 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  CLP  VT++ L++GL K+G+ + A+ +L++M ++G  P   TYT+VI GL +  R +
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF----EKDGFVPRLGSY 276
           EA R+F+ M  +GC PD   Y AL+ G CK  + +EA AL +           VP + +Y
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMF-EEKIE----PDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + LIDGL +A R  EA    R++F +E +E    PD V Y  +I GL + G+V++  +  
Sbjct: 190 TSLIDGLCKAGRILEA----RQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 245

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +MR RG  PD   Y ALI GF    ++ +A  +  ++ +  ++ +T T+ I++ G+C+ 
Sbjct: 246 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 305

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G V +A   F  ME+ GC  +V  ++AL+DG C  G +  A  LF +M + G  P L   
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL--- 362

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC-KV 509
                       S   ++   C AG + KAY    +L +    PD+ T+N+ ++G C ++
Sbjct: 363 -----------VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL 411

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             ++  ++LF+ +  +G  P+  +Y  L++G+ R    E A  IF +M   G  P   V+
Sbjct: 412 DTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVF 471

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
            +L+ W C                  I+GR DE+++   E  ++
Sbjct: 472 NTLIRWLC------------------IAGRVDEALEVFRELERR 497



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 270/539 (50%), Gaps = 55/539 (10%)

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           + C P++V F+++INGL +  + + A  +L+   + G  P+  TY + I GLC+  R D+
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A++L  KM +  C P  V Y AL++G  K  R+DEA+A+L    + G  P L +Y+ +ID
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER---- 337
           GL +A R +EA   +  M      PD  +Y  +I+GL ++GK ++A  L  +   R    
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHA 180

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSL-QVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             VPD   Y +LI G C  G + +AR +   E  +R  +P+  T+T +I G+C+ G V++
Sbjct: 181 TAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEE 240

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
             + F++M   G  P    + ALIDG  KA  + KA+ ++ +M             Q G 
Sbjct: 241 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM------------LQSGT 288

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            V    +   +++  C AG + +AY   + + E G +  ++TY++L++GFC  GN++ A+
Sbjct: 289 -VVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +LF+ +  +G  P+ V+Y  +I GL R  +   A+  F ++ Q    P    + + +   
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           C+R             L  +S    + ++  E  + +G   N                L 
Sbjct: 408 CQR-------------LDTVS----DGVELFESMVSQGTSPN----------------LH 434

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVF 693
            Y+I + G+C+ G ++ AL IF  +V     V P   V   LI  LC  G +D A++VF
Sbjct: 435 SYSILMDGICRAGGLEVALEIFREMV--SRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 260/531 (48%), Gaps = 24/531 (4%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           L+E  ++L+    +    EP   +++       + K +     F+      ++K L +  
Sbjct: 23  LDEAFSVLERA--VRAGCEP--DYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 78

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + +A++  LLK    D     L+++     S     + V+I G  K G  E+A   F  M
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM----VKLNCLPNIVTFSLLINGLSK 180
               C+PD ++Y A++    +      A A+Y E          +P++VT++ LI+GL K
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198

Query: 181 SGKTEVAIKMLD-EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           +G+   A ++ D E  +RG +P+  TYT +I GLC++ R +E    F +M++ G  PD V
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 258

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            Y AL++GF K + + +A  + R   + G V    +Y+ ++DGL +A R  EAYA +  M
Sbjct: 259 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            E      VV Y  ++ G    G V  A++L   M +RG  P+   YN +I+G C  G L
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMC-RNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            +A     ++ +R   P+ +TF   + G+C R   V D  +LF  M   G  P++  ++ 
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L+DG+C+AG LE A  +F +M           +S+G     D     T++   C AG + 
Sbjct: 439 LMDGICRAGGLEVALEIFREM-----------VSRG--VAPDVVVFNTLIRWLCIAGRVD 485

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
           +A ++  +L E  + PD  +Y SL++G  +   +  A  L   ++L+G  P
Sbjct: 486 EALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 237/486 (48%), Gaps = 47/486 (9%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +++ +I+GL R KR DEA++   +      EPD V Y V I GL +A +V DA +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M E+  +P T  Y AL+ G    G LD+A ++  ++ ++ + P   T+T++I G+ +
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G V++A+++F  M   GC P   ++ ALI GLCK+G+ E+A  L+ +    K+      
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHH----- 179

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA-ESGNLPDIITYNSLINGFCKV 509
                  V D  +  ++++  C AG I +A ++    A E G +PD +TY S+I+G CK+
Sbjct: 180 ----ATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +    + F E++ +G  PD+VTY  LI+G  +      A R++ QM Q+G   S   Y
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 295

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
             ++   C+  + + A++ +L    R            ++ F  +G V  A++    M  
Sbjct: 296 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 355

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE-----------------CKAIVTPP 671
           +  +  L  Y I + GLC+ G++ +A   F  L++                 C+ + T  
Sbjct: 356 RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVS 415

Query: 672 SCVKL-------------------IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
             V+L                   + G+C+ G L++A+++F   +  G      V N L+
Sbjct: 416 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475

Query: 713 RSLLFS 718
           R L  +
Sbjct: 476 RWLCIA 481



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 157/331 (47%), Gaps = 2/331 (0%)

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           A +R  +    + +++I  L K    +   +   E+R+      +  +  LI G+ K   
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 272

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
             KA   + +M +         YN +L+   +      A A +  M +  C+  +VT+S 
Sbjct: 273 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L++G    G    A+++   M  RG  PN  +Y I+I GLC+  +  +AY  F K+    
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392

Query: 234 CSPDFVAYNALLNGFC-KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
             PD   +NA L+G C +L  V + + L  S    G  P L SYS L+DG+ RA   + A
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVA 452

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R+M    + PDVV++  +IR L  AG+V +A+++  ++ ER   PD + Y +L+ G
Sbjct: 453 LEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDG 511

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
                 +++AR L   +  +   P  +  T+
Sbjct: 512 LSRCERMEEARLLSFHMKLQGCAPRHYDLTV 542



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 36/201 (17%)

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD V +  +INGL R  R ++AF +  +  + GC P    Y   +   C+  +       
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAER------- 57

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
                                      V++A Q L +MD K        YT  + GL + 
Sbjct: 58  ---------------------------VDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 90

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G++ EA+ +   +VE     T  +   +I GL K G ++ A  +F+  L NG   RP   
Sbjct: 91  GRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG--CRPDAF 148

Query: 709 NYLLRSLLFSKDNKKVHAYHL 729
            Y        K  K   AY L
Sbjct: 149 VYTALIKGLCKSGKPEEAYAL 169


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 179/625 (28%), Positives = 296/625 (47%), Gaps = 36/625 (5%)

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNG----FDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           WA+K+    +F  +S +   +L+  G    F    + L E++     +    F +LI  Y
Sbjct: 94  WASKQP---NFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESY 150

Query: 109 YKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
            K    ++A+     M+E F  + D + YN +LN+        L   V   MV     P+
Sbjct: 151 AKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPD 210

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + TF++LI  L ++ +   AI M++EM   G+ P++ T+T ++ G  +    + A R+  
Sbjct: 211 VTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIRE 270

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M  +GC    V  N L++G+CK  R++E L+ +     +GF P   +++ L++GL R  
Sbjct: 271 QMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
               A      M +E  +PD+  Y  +I GL + G+V++A+++L+ M  R   P+T  YN
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI   C    +++A  L   +  +  LP+  TF  LI G+C       A +LF +M+  
Sbjct: 391 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---------G 455
           GC P    +N LID LC  G LE+A  L  +ME     +N   +  L  G          
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510

Query: 456 NRVHDKASLQ----------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             + D+  LQ          T+++  C    + +A +++ Q+   G  PD  TYNSL+  
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           FC+ G+I  A  + + +   G  PDSVTYGTLI GL +  R E A R+   +   G   +
Sbjct: 571 FCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLA 630

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL--QKGEVENAIQGL 623
           P  Y  ++    R ++ S A  L+ + +      D  + K +   L    G +  A+  L
Sbjct: 631 PQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFL 690

Query: 624 LEMDFK--LNDFQLAPYTIWLIGLC 646
           +EM  K  L DF  + + +   GLC
Sbjct: 691 VEMTDKGFLPDF--SSFLMLAEGLC 713



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 227/460 (49%), Gaps = 18/460 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  ++G  + ALE    M +    PD++ YN+++    +      A+ +  +M
Sbjct: 318 TFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +  +  PN VT++ LI+ L K  + E A ++   +T +GILP+  T+  +I GLC  N  
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH 437

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +MK  GC PD   YN L++  C   R++EAL+LL+  E  G    + +Y+ L
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTL 497

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  + KR +EA   + +M  + I  +VV Y  +I GL +  +V++A +L+  M   G+
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + YN+L+  FC  G + +A  +   +      P++ T+  LI G+ + G V+ A +
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L   ++  G   +   +N +I  L +     +A  LF +M E G  P             
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPP------------- 664

Query: 459 HDKASLQTMVEQYCTAG-LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
            D  + + +    C+ G  I +A   L+++ + G LPD  ++  L  G C +   +  +K
Sbjct: 665 -DAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIK 723

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           L   +  +    DS    ++I G  ++ + +DA    G++
Sbjct: 724 LVNRVMKQANFSDSEV--SMIMGFLKIRKFQDALATLGRI 761



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 242/557 (43%), Gaps = 34/557 (6%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLF-LKMKDSGCSPDFVAYNALL------NGFCKLR 252
           LP  FT   +   L + +  D    L     K     P  V Y  +L        F  +R
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMR 125

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLY 311
           RV      L+  +  G   R G++  LI+   + + +DEA A    M EE  ++ D   Y
Sbjct: 126 RV------LQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTY 179

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             ++  L +  K+K    + S M  RGI PD   +N LIK  C    +  A  +  E+  
Sbjct: 180 NFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGS 239

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  TFT L+ G    G ++ A ++  +M  AGC  S    N L+ G CK G +E+
Sbjct: 240 YGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEE 299

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
                 +M            S  G R  D+ +  ++V   C  G +  A +IL  + + G
Sbjct: 300 VLSFIDEM------------SNEGFR-PDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PDI TYNSLI G CK+G +  A+++  ++ L+   P++VTY TLI+ L + ++ E+A 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
            +   +   G  P    + SL+   C      LA  L+ + ++      DE   +  I+ 
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF-EEMKTKGCHPDEFTYNMLIDS 465

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV- 668
              +G +E A+  L EM+       +  Y   + G C++ +++EA  IF  + E + I  
Sbjct: 466 LCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM-ELQGISR 524

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   LI GLCK   ++ A  +    L  G        N LL     + D KK  A  
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKK--AAD 582

Query: 729 LLCRMKSVGYDLDACLY 745
           ++  M S G + D+  Y
Sbjct: 583 IVQTMTSNGCEPDSVTY 599



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 40/365 (10%)

Query: 60  LRSFASNS----AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           LR F+ N+     +IS L K N  +   +    L S  +      F  LI G     +  
Sbjct: 379 LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR 438

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E F +MK   C PD + YN +++    +     AL++  EM    C  N+VT++ LI
Sbjct: 439 LAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM------ 229
           +G  K+ + E A ++ DEM  +GI  N  TY  +I GLC+  R +EA +L  +M      
Sbjct: 499 DGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK 558

Query: 230 -----------------------------KDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
                                          +GC PD V Y  L+ G  K  RV+ A  L
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRL 618

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL-S 319
           LR+ +  G V    +Y+ +I  LFR KR  EA   +R+M E+   PD V Y V+ RGL S
Sbjct: 619 LRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCS 678

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
             G + +A+  L +M ++G +PD   +  L +G C L + D    L   + K+ +  ++ 
Sbjct: 679 GGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSE 738

Query: 380 TFTIL 384
              I+
Sbjct: 739 VSMIM 743


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/586 (29%), Positives = 283/586 (48%), Gaps = 56/586 (9%)

Query: 123 KMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
           +M E  C P+V+ YN +L       R Q  L  L +  +       P++V+++ +ING  
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G ++ A     EM  RGILP+  TY  +I+ LC+    D+A  +   M  +G  PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN++L+G+C   +  EA+  L+    DG  P + +YS L+D L +  R  EA   +  M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +  ++P++  YG +++G +  G + +   LL  M   GI PD Y ++ LI  + + G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           DQA  +  ++ ++   PN  T+  +I  +C++G V+DA   F +M   G  P   ++N+L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I GLC   + E+A  L  +M    I  N   F                 ++++ +C  G 
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFF----------------NSIIDSHCKEGR 491

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + ++ K+   +   G  P++ITYN+LING+C  G ++ A+KL   +   GL+P++VTY T
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LING  ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++      
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV------ 605

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             R  ES   IE                          L+ Y I L GLC++    +AL 
Sbjct: 606 --RITESGTQIE--------------------------LSTYNIILHGLCKNKLTDDALQ 637

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +F  L      +   +   +I  L K G  D A D+F+    NG +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 256/537 (47%), Gaps = 44/537 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +KA  ++ +M +    PDV  YN+++    + Q    A+ V   MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +P+ +T++ +++G   SG+ + AI  L +M   G+ P+  TY++++  LC+  R  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  P+   Y  LL G+     + E   LL    ++G  P    +S LI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                  + D+A   + KM ++ + P+ V YG +I  L ++G+V+DAM     M + G+ 
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+LI G C     ++A  L +E+  R    NT  F  +I   C+ G V +++KL
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F  M + G  P+V  +N LI+G C AG++++A  L   M  +G  P              
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-------------- 544

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  T++  YC    +  A  +  ++  SG  PDIITYN ++ G  +      A +L+
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +   G + +  TY  +++GL +    +DA ++F    QN C         LM      
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLC---------LMDLKLEA 651

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV----------ENAI-QGLLE 625
           R F++     L+      GR+DE+      F   G V          EN I QGLLE
Sbjct: 652 RTFNIMIDALLKV-----GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 271/628 (43%), Gaps = 54/628 (8%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L    + +++I+ L K    D   + L+ 
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT 256

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM+    +PDV  Y+ +++   +   
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
            + A  ++  M K    P I T+  L+ G +  G       +LD M + GI P+ + ++I
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I       + D+A  +F KM+  G +P+ V Y A++   CK  RV++A+        +G
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI GL    +++ A     +M +  I  + + +  +I    + G+V ++ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ P+   YN LI G+C  G +D+A  L   +      PNT T++ LI G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 604

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +R+++ G ++                                    ++ TYN +++G CK
Sbjct: 605 VRITESGTQI------------------------------------ELSTYNIILHGLCK 628

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
               + AL++F+ L L  L+ ++ T+  +I+ L +V R ++A  +F     NG  P+   
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y+ LM  +   +            + D     D  M +  + E LQ+GE+  A   L  +
Sbjct: 689 YR-LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747

Query: 627 DFKLNDFQLAPYTIWL-IGLCQDGQVKE 653
           D K   F L   T  L I L   G+ +E
Sbjct: 748 DEK--HFSLEASTASLFIDLLSGGKYQE 773



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 271/596 (45%), Gaps = 43/596 (7%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +PD   Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    P+V  Y ++++GL +  + ++A++LL   +D R  G  PD   Y  +I GF   G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R  LP+  T+  +I  +C+   +D A ++ N M K G  P    +N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPT------LFLRLSQGG-----NRVHDK---- 461
           +++ G C +G+ ++A     KM   G  P       L   L + G      ++ D     
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 462 ------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +  T+++ Y T G + + + +L  +  +G  PD   ++ LI  +   G ++ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++ +GL P++VTYG +I  L +  R EDA   F QM   G +P   VY SL+  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEV---ENAIQGLLEMDFKLN 631
            C   K+  A  L L+ L R I          I+   ++G V   E   + ++ +  K N
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
              +  Y   + G C  G++ EA+ + S +V         +   LI+G CK   ++ A+ 
Sbjct: 511 ---VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +F     +G  + P +  Y  +L+ L  ++  +   A  L  R+   G  ++   Y
Sbjct: 568 LFKEMESSG--VSPDIITYNIILQGLFQTR--RTAAAKELYVRITESGTQIELSTY 619



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 44/271 (16%)

Query: 77  NGFDLYWQTLDE---LRSGNVSVV----SDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           NG+ L  + +DE   L SG VSV     +  +  LI+GY K+   E AL  F +M+    
Sbjct: 519 NGYCLAGK-MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PD+  YN +L   F+ +    A  +Y  + +      + T++++++GL K+  T+ A++
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEA------------------YRL------ 225
           M   +    +     T+ I+I  L ++ R DEA                  YRL      
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 226 -----------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                      FL M+D+GC+ D    N ++    +   +  A   L   ++  F     
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + S  ID L    +Y E Y +  + ++  IE
Sbjct: 758 TASLFID-LLSGGKYQEYYRFLPEKYKSFIE 787


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 201/767 (26%), Positives = 331/767 (43%), Gaps = 127/767 (16%)

Query: 5   LNEVLTILDTVTPIEPALEPLLP---FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-- 59
           + ++L +L T    E  L+        L+      V+ + ++ ++G +FF W ++ +   
Sbjct: 31  VKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSG 90

Query: 60  -LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            +  FA  S+++ +L +   F      L+ +R   +S   +   ++I  Y   G  EKAL
Sbjct: 91  PINGFAY-SSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKAL 149

Query: 119 E-SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-------------- 163
           E  +  +K +   PDV   N++LN+  +     +A  +Y EM++++              
Sbjct: 150 ELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI 209

Query: 164 -------------------------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
                                    C+PNI+ ++ LI+G  K G  E+A  +  E+  +G
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMK---------------------------- 230
            LP   TY  +I+G C+        RL ++M                             
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329

Query: 231 -------DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
                  + GC PD V YN L++G C+  +V EA  LL      G +P   SY+ LI   
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +   YD A  W  +M E   +PD+V YG ++ GL  AG+V  A+ +   M ERG+ PD 
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ G C    L  A+ L  E+  +  LP+   +  L+ G  RNG +D+A+KLF  
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
             + G  P +  +NA+I G CK G ++ A     +M             +  +   D+ +
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRM-------------KKRHLAPDEFT 556

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++ Y     +  A K+  ++ +    P+++TY SLINGFC+ G+++ +LK+F+E+Q
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             GL P+ VTY  LI    +  +  DA   F +M  N C P+   +  L           
Sbjct: 617 ACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYL----------- 665

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGE--VENAIQGLLEMDFKLNDFQLAP---- 637
                       ++G      ++I E   KG    EN     L    ++     AP    
Sbjct: 666 ------------VNGFSKNGTRAISE---KGNEFQENKQSMFLNFFGRMISDGWAPRSAA 710

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           Y   LI LCQ G  + AL + + +     I    S V L+HG+C  G
Sbjct: 711 YNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEG 757


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 193/704 (27%), Positives = 325/704 (46%), Gaps = 98/704 (13%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVF 101
              R F  A+K+    +F+   A+   +L    +   FD   + L++++S    + +  F
Sbjct: 65  AALRLFNLASKKP---NFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTF 121

Query: 102 FVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            +LI  Y +    ++ L     M  EF  +PD + YN +LN+        L    + +M 
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P++ TF++LI  L ++ +   AI ML++M   G++P++ T+T V+ G  +    D
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRLGSYSCL 279
            A R+  +M + GCS   V+ N +++GFCK  RV++AL  ++    +DGF P   +++ L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL +A     A      M +E  +PDV  Y  +I GL + G+VK+A+++L  M  R  
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC--RN------ 391
            P+T  YN LI   C    +++A  L   +  +  LP+  TF  LI G+C  RN      
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421

Query: 392 ---------------------------GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
                                      G +D+A  +  +ME +GC  SV  +N LIDG C
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KA +  +A  +F +ME+            G +R  +  +  T+++  C +  +  A +++
Sbjct: 482 KANKTREAEEIFDEMEV-----------HGVSR--NSVTYNTLIDGLCKSRRVEDAAQLM 528

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            Q+   G  PD  TYNSL+  FC+ G+I  A  + + +   G  PD VTYGTLI+GL + 
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R E A ++   +   G   +P  Y  ++    R+RK + A +L+               
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF--------------- 633

Query: 605 KSIEEFLQKGEV-ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLV 662
               E L++ E   +A+                 Y I   GLC   G ++EA++    L+
Sbjct: 634 ---REMLEQNEAPPDAVS----------------YRIVFRGLCNGGGPIREAVDFLVELL 674

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           E K  V   S + ++      G L L+M+  L  L N  + + R
Sbjct: 675 E-KGFVPEFSSLYML----AEGLLTLSMEETLVKLVNMVMQKAR 713



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 201/513 (39%), Gaps = 88/513 (17%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMR------------------------------ 335
           P+  LY  ++  L  +G   D  K+L DM+                              
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 336 ------ERGIVPDTYCY-----------------------------------NALIKGFC 354
                 E G+ PDT+ Y                                   N LIK  C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               L  A  +  ++     +P+  TFT ++ G    G +D A ++  +M + GC  S  
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
             N ++ G CK G +E A  L +  E+      F           D+ +  T+V   C A
Sbjct: 261 SVNVIVHGFCKEGRVEDA--LNFIQEMSNQDGFF----------PDQYTFNTLVNGLCKA 308

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A +I+  + + G  PD+ TYNS+I+G CK+G +  A+++  ++  +   P++VTY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TLI+ L + ++ E+A  +   +   G  P    + SL+   C  R   +A  L+ + +R
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF-EEMR 427

Query: 595 DISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                 DE   +  I+    KG+++ A+  L +M+       +  Y   + G C+  + +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  IF  +          +   LI GLCK   ++ A  +    +  G        N LL
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                  D KK  A  ++  M S G + D   Y
Sbjct: 548 THFCRGGDIKK--AADIVQAMTSNGCEPDIVTY 578



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 122/276 (44%), Gaps = 10/276 (3%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I    K N      +  DE+    VS  S  +  LI G  K    E A + 
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M     +PD Y YN++L    R      A  +   M    C P+IVT+  LI+GL K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFV 239
           +G+ EVA K+L  +  +GI      Y  VI GL +  +  EA  LF +M + +   PD V
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647

Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           +Y  +  G C     + EA+  L    + GFVP   S   L +GL      +E       
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVN 706

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           M  +K    E +V     M++GL +  K +DA+  L
Sbjct: 707 MVMQKARFSEEEV----SMVKGLLKIRKFQDALATL 738


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/582 (29%), Positives = 289/582 (49%), Gaps = 37/582 (6%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGL 178
           F +M E  C PD   Y+ VL           AL +    VK    C  N+V +S +++GL
Sbjct: 162 FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGL 221

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K GK   A  +  EMTQ+G+ PN  TY  VI  LC+    D+A  +  +M  +G  PD 
Sbjct: 222 FKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDN 281

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN L++G+  L +  +A+ + +     G +P   + S  +  L +  R +EA  ++  
Sbjct: 282 VTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDS 341

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +  + +++ Y  ++ G + AG + D   L + M   GIVP+ + +N L+ G+   G+
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           + +A  +  ++ KR   P+  T+  +I   CR G +DDA   FN M   G  P+  ++  
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461

Query: 419 LIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQGGN------------RVH 459
           LI G C  G+L KA  L Y++   G  P      +L   L + G             R  
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521

Query: 460 DKASLQ---TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           +KA +    ++++ YC  G + +A+++   +   G  PDI+TY +L+NG CK G I+  L
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGL 581

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+EL  KG++P + TYG +++GL    R   A  +F +M ++G   +   Y  L+T  
Sbjct: 582 ILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGL 641

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           CR      A +++ Q L  ++ + D  + +  I +  +    E A +GL      + D+ 
Sbjct: 642 CRNNCTEEAITVF-QKLCAMNVKFDIVILNIMISKMFKARRREEA-EGLFA---SIPDYG 696

Query: 635 LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           L P    YTI +  L ++G V+EA  +FSV++  K+ ++P S
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVML--KSGLSPTS 736



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 264/589 (44%), Gaps = 94/589 (15%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           LP + T+S+LI+   ++ + ++A      + ++G+  +    + ++ GLC   R DEA  
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 225 -LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR-SFEKDGFVP-RLGSYSCLID 281
            LF +M + GC PD ++Y+ +L   C   R   AL +LR + ++ G  P  +  YS ++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GLF+  +  EA   + +M ++ + P+VV Y  +I  L +A  V  A  +L  M   G+ P
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK-- 399
           D   YN LI G+  LG   QA  +  E+  R  +PNT T +  +  +C++G +++A++  
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 400 ---------------------------------LFNKMEKAGCFPSVGMFNALIDGLCKA 426
                                            LFN M + G  P+  +FN L++G  K 
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKC 399

Query: 427 GELEKANLLFYKMEI-GKNPTL---------FLRLSQGG------NRVHDK------ASL 464
           G + +A  +F  M+  G NP +         F R+          N + DK      A  
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVY 459

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
           Q +++ +CT G + KA +++ ++   G  P I+++ SLIN  CK G +  A ++F  +  
Sbjct: 460 QCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIR 519

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G + D   + +LI+G   + +  +AFR+   M   G  P    Y +L+   C+      
Sbjct: 520 TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK------ 573

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                       +GR D+ +    E L KG              K   F    Y I L G
Sbjct: 574 ------------NGRIDDGLILFRELLHKG-------------VKPTTFT---YGIILDG 605

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           L   G+   A  +F  ++E    VT P+   L+ GLC+    + A+ VF
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVF 654



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +R+G  + V ++F  LI GY  +G   +A      M     +PD+  Y  ++N   +   
Sbjct: 518 IRTGEKADV-NIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGR 576

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
               L ++ E++     P   T+ ++++GL  +G+T  A +M  EM + GI     TY+I
Sbjct: 577 IDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSI 636

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +++GLC+ N  +EA  +F K+       D V  N +++   K RR +EA  L  S    G
Sbjct: 637 LLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYG 696

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            VP + +Y+ +++ L +    +EA   +  M +  + P      V++R L E G++  A
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 19/203 (9%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           EL    V   +  + +++ G +  G    A E F +M E      +  Y+ +L    R  
Sbjct: 586 ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNN 645

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A+ V+ ++  +N   +IV  +++I+ + K+ + E A  +   +   G++P   TYT
Sbjct: 646 CTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYT 705

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I++  L +    +EA  +F  M  SG SP     N                 ++R+  + 
Sbjct: 706 IMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFIN----------------VIVRTLLEK 749

Query: 268 GFVPRLGSYSCLIDG---LFRAK 287
           G + + G Y C +DG   LF A 
Sbjct: 750 GEIVKAGIYMCRVDGKSILFEAS 772


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 171/606 (28%), Positives = 303/606 (50%), Gaps = 34/606 (5%)

Query: 20  PALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
           P+L+ ++P +S + V+S+     +P+    F  W ++  R +    + A +  LL  NG+
Sbjct: 79  PSLKSMVPAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGY 138

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM---KEFDCQPDVYI- 135
                         V VV  +  ++I     V D    L+   KM   + F+ +  + I 
Sbjct: 139 --------------VGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKYKLIIG 184

Query: 136 -YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN +LN   R  L      VY EM++    PNI T++ ++NG  K G  E A + +  +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G+ P+ FTYT +I G CQ    D A+++F +M   GC  + VAY  L++G C  RR+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DEA+ L    + D   P + +Y+ LI  L  ++R  EA    ++M E+ I+P++  Y V+
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I  L    K++ A +LL  M E+G++P+   YNALI G+C  G+++ A  +   +  R+ 
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PNT T+  LI G C+   V  A  + NKM +    P V  +N+LIDG C++G  + A  
Sbjct: 425 RPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA-- 481

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             Y++         L L      V D  +  +M++  C +  + +A  +   L +   +P
Sbjct: 482 --YRL---------LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIP 530

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +++ Y +LI+G+CK G +N A  + +++  K   P+S+T+  LI+GL    + ++A  + 
Sbjct: 531 NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLE 590

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M +    P+ +    L+    +   F  A+  + Q L   +  D  +  + I+ + ++
Sbjct: 591 EKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCRE 650

Query: 614 GEVENA 619
           G +++A
Sbjct: 651 GRLQDA 656



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 258/549 (46%), Gaps = 53/549 (9%)

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++ L +    DE  +++++M +    P+   YN ++NG+CK+  V+EA   +    
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +Y+ LI G  + K  D A+  +++M  +    + V Y  +I GL    ++ 
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +AM L   M++    P    Y  LIK  C      +A +L  E+ ++   PN HT+T+LI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C    ++ A++L  +M + G  P+V  +NALI+G CK G +E A      +++    
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA------LDV---- 415

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
              + L +  N   +  +   +++ YC    +HKA  +L ++ E   LPD++TYNSLI+G
Sbjct: 416 ---VELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ GN + A +L   +  +GL PD  TY ++I+ L +  R E+A  +F  + Q    P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN 531

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
             +Y +L+   C+                  +G+ +E+   +E+ L K  + N++     
Sbjct: 532 VVMYTALIDGYCK------------------AGKVNEAHLMLEKMLSKNCLPNSLT---- 569

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       +   + GLC DG++KEA  +   +V+     T  +   LIH L K G 
Sbjct: 570 ------------FNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            D A   F   L +G   +P    Y      + ++ +   A  ++ +MK  G   D   Y
Sbjct: 618 FDHAYRRFQQMLSSG--TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675

Query: 746 PKTKSLLPG 754
               SL+ G
Sbjct: 676 ---SSLIKG 681



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 228/505 (45%), Gaps = 35/505 (6%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S N+   +  +  LI GY K  +  KA+    KM E    PDV  YN++++   R   
Sbjct: 419 MESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F  A  +   M     +P+  T++ +I+ L KS + E A  + D + Q+ ++PN   YT 
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTA 537

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C+  + +EA+ +  KM    C P+ + +NAL++G C   ++ EA  L     K  
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P + + + LI  L +   +D AY  +++M     +PD   Y   I+     G+++DA 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI--- 385
            +++ M+E G+ PD + Y++LIKG+ DLG  + A  +   +      P+ HTF  LI   
Sbjct: 658 DMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717

Query: 386 ---------------CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                          C M      D   +L  KM + G  P+   +  L+ G+C+ G L 
Sbjct: 718 LEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLR 777

Query: 431 KANLLFYKMEI--GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            A  +F  M+   G +P+  +                 ++   C     ++A K++  + 
Sbjct: 778 VAEKVFDHMQQKEGISPSELV--------------FNALLSCCCKLEKHNEAAKVVDDMI 823

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G+LP + +   LI    K G       +F+ L   G   D + +  +I+G+ +    E
Sbjct: 824 CVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVE 883

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLM 573
             + +F  M +NGCT S   Y  L+
Sbjct: 884 AFYELFNVMEKNGCTFSSQTYSLLI 908



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 180/420 (42%), Gaps = 19/420 (4%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           ++ N    +R       R  +    + +++I  L K    +      D L   +V     
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVV 533

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI GY K G   +A     KM   +C P+   +NA+++          A  +  +M
Sbjct: 534 MYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKM 593

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK++  P + T ++LI+ L K G  + A +   +M   G  P+  TYT  I   C+  R 
Sbjct: 594 VKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  +  KMK++G SPD   Y++L+ G+  L R + A  +L+     G  P   ++  L
Sbjct: 654 QDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSL 713

Query: 280 IDGLFRAK------------------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           I  L   K                   +D       KM E  + P+   Y  ++ G+ E 
Sbjct: 714 IKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEI 773

Query: 322 GKVKDAMKLLSDMRER-GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           G ++ A K+   M+++ GI P    +NAL+   C L   ++A  +  ++     LP   +
Sbjct: 774 GNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLES 833

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             ILIC + + G  +    +F  + + G +     +  +IDG+ K G +E    LF  ME
Sbjct: 834 CKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVME 893


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 209/827 (25%), Positives = 376/827 (45%), Gaps = 113/827 (13%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTT----VTSVIMKTKNPQVGFRFFIWAAKR-KR 59
           +++V  IL++  P  P LE  L  L +      V  V+ + K+      +F WA K+ ++
Sbjct: 63  VDDVCCILES-GPWGPTLENSLSALGEKPLPELVIGVLKRLKDANTAVNYFQWAEKQTEK 121

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELR------SGNVSV----------------- 96
           +    + ++++ ++ +   FD   + L+E+       S N+S+                 
Sbjct: 122 VHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFD 181

Query: 97  ------------VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
                           + +LI    +V + +  L  F +M+E   + +V+++  ++ +  
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R+     AL++  EM   +   +IV +++ I+   K+GK +++ K   EM   G++P+  
Sbjct: 242 REGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TYT +I  LC+ NR DEA  LF +++ +   P   AYN ++ G+    + DEA  LL   
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           +  G +P + +Y+C++  L + +R +EA   + +M  + + P+V  Y ++I  L   GK+
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKL 420

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A+++  DM   G+ P+    N +I   C    L++A S+   +  +   PN  TF+ L
Sbjct: 421 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM----- 439
           I G+ + G VDDA  L+ KM   G  P   ++ +LI    K G  E  + ++ +M     
Sbjct: 481 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540

Query: 440 ------------------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
                             E  K   LF  ++  G  + D  S   ++     AGL ++ Y
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHG-FIPDARSYSILIHGLVKAGLANETY 599

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++   + E G + D   YN++I+GFCK G +N A +L +E+++KG  P  VTYG++I+GL
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            ++DR ++A+ +F +   NG   +  VY SL+    +                   GR D
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK------------------VGRID 701

Query: 602 ESMKSIEEFLQKGEVENA------IQGLLEMDF---------KLNDFQLAP----YTIWL 642
           E+   +EE +QKG   N       +  L++ +           + D +  P    Y+I +
Sbjct: 702 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 761

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKN 699
            GLC   +V++    F    E + +   P+ +    +I GL K G +  A  +F     N
Sbjct: 762 NGLC---RVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKAN 818

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLL--CRMKSVGYDLDACL 744
           G I      N ++  L  S  NK + AY L    R+K        C+
Sbjct: 819 GGIPDSASYNAMIEGL--SSANKAMDAYALFEETRLKGCNIHTKTCV 863



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 163/684 (23%), Positives = 299/684 (43%), Gaps = 83/684 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I +  +    D     LDE++S ++     ++ V I  + K G  + + + F +MK 
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKS 293

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y +++ +  +      A+ ++ ++ +   +P    ++ +I G   +GK + 
Sbjct: 294 HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDE 353

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK---------------- 230
           A  +L+    +G +P+   Y  +++ L +  R +EA R+F +MK                
Sbjct: 354 AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDM 413

Query: 231 ------------------DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
                              +G  P+ +  N +++  CK ++++EA ++    +     P 
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             ++S LIDGL +  R D+AY+ Y KM +    P  ++Y  +IR   + G+ +D  K+  
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M   G  PD    N  +      G  ++ R+L  EI     +P+  +++ILI G+ + G
Sbjct: 534 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRL 451
           + ++  +LF  M++ GC      +NA+IDG CK+G++ KA  L  +M++ G  PT+    
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV---- 649

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  ++++       + +AY +  +   +G   +++ Y+SLI+GF KVG 
Sbjct: 650 ----------VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I+ A  + +EL  KGL P+  T+  L++ L + +   +A   F  M    C P+   Y  
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   CR RKF+ AF  W                  +E  + G   N I           
Sbjct: 760 LINGLCRVRKFNKAFVFW------------------QEMQKLGLKPNTIT---------- 791

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + GL + G + EA  +FS       I    S   +I GL        A  
Sbjct: 792 ------YTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 845

Query: 692 VFLYTLKNGFILRPRVCNYLLRSL 715
           +F  T   G  +  + C  LL +L
Sbjct: 846 LFEETRLKGCNIHTKTCVVLLDAL 869



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 184/393 (46%), Gaps = 55/393 (13%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K +G  +Y + +    S ++++++      +   +K G+ EK    F ++      PD  
Sbjct: 525 KEDGHKIYKEMVHTGCSPDLTLIN----TYMDCVFKAGETEKGRALFREINAHGFIPDAR 580

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y+ +++   +  L      ++Y M +  C+ +   ++ +I+G  KSGK   A ++L+EM
Sbjct: 581 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 640

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             +G  P   TY  VI GL +I+R DEAY LF + K +G   + V Y++L++GF K+ R+
Sbjct: 641 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRI 700

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLID--------------------------------- 281
           DEA  ++    + G  P + +++CL+D                                 
Sbjct: 701 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 760

Query: 282 --GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             GL R +++++A+ ++++M +  ++P+ + Y  MI GL++AG + +A  L S  +  G 
Sbjct: 761 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 820

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD+  YNA+I+G         A +L  E   +    N HT T ++              
Sbjct: 821 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGC--NIHTKTCVV-------------- 864

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           L + + KA C     +  A++    K+    ++
Sbjct: 865 LLDALHKAECLEQAAIVGAVLKETAKSQHASRS 897



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 3/209 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  ++EL    ++     +  L+    K  +  +AL  F  MK+
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 747

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   Y+ ++N   R + F  A   + EM KL   PN +T++ +I+GL+K+G    
Sbjct: 748 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +       G +P+  +Y  +I GL   N+A +AY LF + +  GC+        LL+
Sbjct: 808 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 867

Query: 247 GFCKLRRVDEAL---ALLRSFEKDGFVPR 272
              K   +++A    A+L+   K     R
Sbjct: 868 ALHKAECLEQAAIVGAVLKETAKSQHASR 896


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 189/691 (27%), Positives = 329/691 (47%), Gaps = 62/691 (8%)

Query: 9   LTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS--FASN 66
           L+IL   +P +  L+         T     +++  P   F+ F    KR RLR      N
Sbjct: 125 LSILRLTSPSKALLD---------TAIGAYVQSGQPHHAFQIFK-KMKRLRLRPNLLTCN 174

Query: 67  SAVISMLLKPNGFDLYWQTL---DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           + + S++  P+   + +      D ++ G V  V + F ++I GY      + A+E    
Sbjct: 175 TLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV-NTFNIVIYGYCLENKFKDAVEFLNV 233

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M +++C PD   YN +L+   +K     A  +  +M     LPN  T+++L+ G  K G 
Sbjct: 234 MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A  +++ MTQ  +LP+ +TY ++I+GLC   R +EA++L  +M++    PD V+YN 
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+NG  +  ++ EA  LL    + G  P   +++ ++    +  + D+A     KM E  
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             PD V Y  +I G  +AG + +A + + +M  + +  D+   N +++  C    L++A 
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L     KR    +  ++  LI G  ++G VD A KL+++M++    PS   +N +I GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 424 CKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C+ G+ E+A + L   +E G  P              D+ +  T++  YC  G + KA++
Sbjct: 534 CQCGKTEQAISKLNELLESGLLP--------------DETTYNTILHGYCREGDVEKAFQ 579

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
              ++ E+   PD+ T N L+ G C  G +  ALKLF     KG   D+VTY TLI  L 
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  R +DAF +  +M +    P    Y +++T                  L D SGR  E
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT-----------------ALTD-SGRIRE 681

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMD----------FKLNDFQLAPYTIWLIGLCQDGQVK 652
           + + + + L+KG + + +   L++D           + +D     Y+ W+  LC +G+ K
Sbjct: 682 AEEFMSKMLEKGNLPDQV---LQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +A+ IF    +    V   + + L+ GL KR
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKR 769



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 260/549 (47%), Gaps = 58/549 (10%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSK---SGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           A  ++ +M +L   PN++T + L+N L +   S     + +  ++  + GI+PN  T+ I
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           VI G C  N+  +A      M    CSPD V YN +L+  CK  R+ +A  LL   +  G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P   +Y+ L+ G  +     EA      M +  + PDV  Y ++I GL   G++++A 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL  +M    ++PD   YN LI G  +   + +A  L  E+ ++   PN  T  I++   
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           C+ G +DDA     KME++G  P    +N LI+G CKAG + +A   F  M E+G+    
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMGRK--- 447

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                   N   D  +L T++   C    + +AYK+L    + G   D ++Y +LI G+ 
Sbjct: 448 --------NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYF 499

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN++ ALKL+ E++ K + P +VTY  +I GL +  + E A     ++ ++G  P   
Sbjct: 500 KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ---GLL 624
            Y +++   CR                                  +G+VE A Q    ++
Sbjct: 560 TYNTILHGYCR----------------------------------EGDVEKAFQFHNKMV 585

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           E  FK + F      I L GLC +G +++AL +F+  V     +   +   LI  LCK G
Sbjct: 586 ENSFKPDVFTC---NILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 685 YLDLAMDVF 693
            LD A ++ 
Sbjct: 643 RLDDAFNLL 651



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 241/506 (47%), Gaps = 36/506 (7%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + + +L+ GY K+G  ++A      M + +  PDV+ YN ++N    +     A  +  E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M  L  LP++V+++ LING  +  K   A K+L+EM+++G+ PN  T+ I++   C+  +
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D+A     KM++SG SPD V YN L+NG+CK   + EA   +    +        + + 
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++  L R K+ +EAY       +     D V YG +I G  + G V  A+KL  +M+E+ 
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I+P T  YN +I G C  G  +QA S   E+ +   LP+  T+  ++ G CR G V+ A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +  NKM +    P V   N L+ GLC  G LEKA  LF              +S+G  + 
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW-----------VSKG--KA 625

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T++   C  G +  A+ +L ++ E    PD  TYN++I      G I  A + 
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEF 685

Query: 519 FKELQLKGLRPDSV-----------------------TYGTLINGLQRVDREEDAFRIFG 555
             ++  KG  PD V                        Y   I  L    + +DA RIFG
Sbjct: 686 MSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  Q G T   + Y +LM    +RRK
Sbjct: 746 ESKQKGITVDKSTYINLMDGLIKRRK 771



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 254/548 (46%), Gaps = 57/548 (10%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           SLL+  ++   + ++ + +L     R   P+K      I    Q  +   A+++F KMK 
Sbjct: 109 SLLLGFIATDRRHDLHLSIL-----RLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKR 163

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE---KDGFVPRLGSYSCLIDGLFRAKR 288
               P+ +  N LLN   +            +F    K G VP + +++ +I G     +
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           + +A  +   M +    PD V Y  ++  L + G++ DA  LL DM+ RG++P+   YN 
Sbjct: 224 FKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ G+C +G L +A ++   + + + LP+  T+ +LI G+C  G +++A KL ++ME   
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P V  +N LI+G  +  ++ +A  L  +M E G  P              +  +   M
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP--------------NAVTHNIM 389

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V+ YC  G +  A   + ++ ESG  PD +TYN+LING+CK GN+  A +   E+  K +
Sbjct: 390 VKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNM 449

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           + DSVT  T++  L R  + E+A+++     + G       Y +L+              
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI-------------- 495

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
             + Y +D  G  D ++K  +E  +K  + + +                 Y   + GLCQ
Sbjct: 496 --VGYFKD--GNVDRALKLWDEMKEKEIIPSTVT----------------YNCIIGGLCQ 535

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G+ ++A++  + L+E   +    +   ++HG C+ G ++ A       ++N F      
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595

Query: 708 CNYLLRSL 715
           CN LLR L
Sbjct: 596 CNILLRGL 603


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 181/687 (26%), Positives = 321/687 (46%), Gaps = 28/687 (4%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            T+ E   GN +     +  +I G  K    ++A      M +   + DV  Y+ +++  
Sbjct: 185 HTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGL 244

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            + Q    A  V   M+     P++VT++ +I+GL K+   + A  +L  M  +G+ P+ 
Sbjct: 245 CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 304

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I GLC+    D A  +   M D    PD   YN L++G+       E +  L  
Sbjct: 305 VTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEE 364

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P + +YS L+D L +  +  EA   +  M  + I+P+V +YG+++ G +  G 
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + D   LL  M   GI P+ Y +N ++  +    ++D+A  +   + +    P+  T+ I
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI  +C+ G VDDA   FN+M   G  P+  +FN+L+ GLC     EKA  LF++M + G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P +                  T++   C  G +  A +++  +   G  P++I+YN+L
Sbjct: 545 VRPNVVF--------------FNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I G C  G  + A +L   +   GL+PD ++Y TL+ G  +  R ++A+ +F +M + G 
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK----GEVEN 618
           TP    Y +++      R+FS A  L+L  ++     D  +   I   L K     E   
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
             Q L   D + N   +  +TI +  L + G+ K+A+++F+ +     +    +   ++ 
Sbjct: 711 IFQSLCSKDLRPN---IITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
            + + G LD   ++FL   K+G      + N ++RSLL   +  +  AY  L ++  + +
Sbjct: 768 NIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAY--LSKIDEMNF 825

Query: 739 DLDACLYPKTKSLLPGPWNTREMENMS 765
            L+A     T SLL   ++  E +N +
Sbjct: 826 SLEA----STTSLLISLFSREEYKNHA 848



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 170/657 (25%), Positives = 285/657 (43%), Gaps = 71/657 (10%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL---LALAVYYEMVKL---NCLPNI 168
           + AL+ F ++        V  +N +LN+  R +      LA++++  M +       P++
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T+S+L     + G+ E        + + G   N+     +++GLC   R DEA  + L+
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 229 -MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG---FVPRLGSYSCLIDGLF 284
            M + GC P+ V+ N LL G C  +RV+EAL LL +  +DG     P + +Y+ +IDGL 
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A+  D A    + M ++ ++ DVV Y  +I GL +A  V  A  +L  M ++G+ PD  
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN +I G C    +D+A  +   +  +   P+  T+  +I G+C+   VD A  +   M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 405 EKAGCFPSVGMFNALIDG-----------------------------------LCKAGEL 429
                 P +  +N LI G                                   LCK G+ 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 430 EKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            +A  +FY M    I  N T++  L  G                Y   G I     +L  
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHG----------------YAARGAIADLTDLLDL 434

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +  +G  P+   +N ++  + K   I+ A+ +F  +   GL PD VTYG LI+ L ++ R
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA----FSLWLQYLRDISGRDDE 602
            +DA   F QM  +G TP+  V+ SL+   C   ++  A    F +W Q +R      + 
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            M ++    Q    +  I  +  +  + N   +  Y   + G C  G+  EA  +  V+V
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPN---VISYNTLIGGHCLAGRTDEAAQLLDVMV 611

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
                    S   L+ G CK G +D A  +F   L+ G        + +L+ L  ++
Sbjct: 612 SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTR 668



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 35/370 (9%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L K    D      +++ +  V+  S VF  L+ G   V   EKA E F +M +  
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+V  +N ++     +   ++A  +   M ++   PN+++++ LI G   +G+T+ A 
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604

Query: 189 KMLD-----------------------------------EMTQRGILPNKFTYTIVISGL 213
           ++LD                                   EM ++G+ P   TY+ ++ GL
Sbjct: 605 QLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
               R  EA  L+L M  SG   D   YN +LNG CK   VDEA  + +S       P +
Sbjct: 665 FHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNI 724

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++ +ID LF+  R  +A   +  +    + P+VV Y +M++ + + G + +   L   
Sbjct: 725 ITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLA 784

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M + G  PD+   NA+I+     G + +A +   +I + +      T ++LI    R   
Sbjct: 785 MEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEY 844

Query: 394 VDDAQKLFNK 403
            + A+ L  K
Sbjct: 845 KNHAKSLPEK 854



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 179/461 (38%), Gaps = 117/461 (25%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA---GELEKANLLFYKMEIGKN----PT 446
           +DDA KLF+++       SV  FN L++ + +A      E A  LF +M    +    P 
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 447 L---------FLRLS-------------QGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           L         F RL              + G RV++   +  ++   C A  + +A  IL
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNE-VVINQLLNGLCDAKRVDEAMDIL 148

Query: 485 MQ------------------------------------LAESGN---LPDIITYNSLING 505
           ++                                    +AE G     P+++TYN++I+G
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL---QRVDREEDAFR---------- 552
            CK   ++ A  + + +  KG++ D VTY T+I+GL   Q VDR E   +          
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 553 ----------------------IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
                                 +   M   G  P    Y +++   C+ +    A  + L
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGV-L 327

Query: 591 QYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
           Q++ D   + D    +  I  +L  GE +  ++ L EM  +  D  +  Y++ L  LC++
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           G+  EA  IF  ++  +  + P   +   L+HG   RG +    D+    + NG  + P 
Sbjct: 388 GKCTEARKIFYCMI--RKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG--ISPN 443

Query: 707 VCNYLLRSLLFSKDNKKV--HAYHLLCRMKSVGYDLDACLY 745
             NY+   +L +   K +   A H+  RM   G   D   Y
Sbjct: 444 --NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 267/522 (51%), Gaps = 29/522 (5%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +RS  +  +S  F  L+ G  K+    +    + +M+     PD++  + + N       
Sbjct: 83  MRSHPIPPISS-FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              ALA    +++   +PN+VT++ LI GL    +   A ++   M + G  PN  TY  
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 209 VISGLCQINRADEAYRLFLKMKDSG------CSPDFVAYNALLNGFCKLRRVDEALALLR 262
           +I GLCQ    + A +L  +M +        C P  + Y+ +++G CK+ R DEA  L  
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             +  G +P + SYS LI G   A ++D++   + +M ++ ++PD+V + V+I  L + G
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           KV +A KLL  M +RGIVP+   YN+LI GFC +G L+ AR L + +  +   P+  ++T
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-- 440
            LI G C+   V +A  L+N+M + G  P+V  +  L+ GL + G++  A  LF  M+  
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 441 ---------------IGKNPTLFLRLS-----QGGNRVHDKASLQTMVEQYCTAGLIHKA 480
                          + KN  LF  +      +  N   +  +   +++  C AG +  A
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           +++  +L++ G  PD++TYN +I+GFCKVG ++ A  LF++++  G  PD + Y TL+ G
Sbjct: 502 WELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG 561

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
               ++ E+  ++  +M Q   +P+ A    ++   C+  K+
Sbjct: 562 FCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 603



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 256/531 (48%), Gaps = 20/531 (3%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M++ + +P I +F+ L+ GL+K         + +EM   G+ P+ FT +I+ + LC +NR
Sbjct: 82  MMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNR 141

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA      +   G  P+ V Y  L+ G C   R+ EA  L    +K G  P   +Y  
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEE------KIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           LI GL +    + A   +++M  +        +P V+ Y ++I GL + G+  +A +L  
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+ +G++PD   Y+ LI GFC  G  DQ++ L  E+  +   P+  TF++LI  +C+ G
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            V +A+KL   M + G  P++  +N+LIDG C  G+L  A  LF  M     P+  L   
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM-----PSKGLE-- 374

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D+ S  T++  YC    + +A  +  ++ + G  P++ TY +L+ G  + G +
Sbjct: 375 ------PDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A KLF  ++  G+  +S  YG  ++GL + D   +A  +F ++       +   Y  L
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLN 631
           +   C+  K   A+ L+ +  ++    D  +    I  F + G+V+NA     +M+    
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
              +  Y   L G C+  +++E + +   +V+        SC  ++  LCK
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 268/566 (47%), Gaps = 59/566 (10%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A    D M +   +P   ++  ++ GL +IN   + + L+ +M+ +G SPD    + L N
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C + RV EALA +    + G++P + +Y+ LI GL    R  EA   + +M +    P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKL----LSDMRERGI--VPDTYCYNALIKGFCDLGLLD 360
           + V YG +I+GL + G V  A+KL    L+D  + G+   P    Y+ +I G C +G  D
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A+ L  E+  +  +P+  +++ LI G C  G  D ++ LF++M   G  P +  F+ LI
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 421 DGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           D LCK G++ +A  LL   ++ G  P L               +  ++++ +C  G ++ 
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLI--------------TYNSLIDGFCMVGDLNS 360

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A ++ + +   G  PD I+Y +LING+CK   +  A+ L+ E+   G  P+  TYGTL+ 
Sbjct: 361 ARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK 420

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL +  +  DA ++FG M   G + +  +Y   +   C                     +
Sbjct: 421 GLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLC---------------------K 459

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           +D   +++E F +          L   +FKLN   +  Y+  + GLC+ G+++ A  +F 
Sbjct: 460 NDCLFEAMELFNE----------LKSYNFKLN---IENYSCLIDGLCKAGKLETAWELFE 506

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            L +        +   +IHG CK G +D A  +F    +NG    P +  Y      F +
Sbjct: 507 KLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG--CTPDIIAYNTLLCGFCE 564

Query: 720 DNKKVHAYHLLCRM--KSVGYDLDAC 743
            NK      LL +M  K V  +  +C
Sbjct: 565 GNKLEEVIKLLHKMVQKDVSPNAASC 590



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 35/367 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I G  KVG  ++A E F +MK     PDV  Y+ +++       +  +  ++ EM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P++VTFS+LI+ L K GK   A K+L+ M QRGI+PN  TY  +I G C +   
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  LFL M   G  PD ++Y  L+NG+CK  +V EA+ L     + G  P + +Y  L
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV-------------------------- 313
           + GLF+  +  +A   +  M    +  +  +YG+                          
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 314 ---------MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
                    +I GL +AGK++ A +L   + + G+ PD   YN +I GFC +G +D A  
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++ +    P+   +  L+CG C    +++  KL +KM +    P+      ++D LC
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLC 598

Query: 425 KAGELEK 431
           K  + +K
Sbjct: 599 KDEKYKK 605



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 35/263 (13%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+  VGD   A E F  M     +PD   Y  ++N   +      A+ +Y EM+++ 
Sbjct: 348 LIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVG 407

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI--------------- 208
             PN+ T+  L+ GL + GK   A K+   M   G+  N   Y I               
Sbjct: 408 KSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAM 467

Query: 209 --------------------VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
                               +I GLC+  + + A+ LF K+   G  PD V YN +++GF
Sbjct: 468 ELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGF 527

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK+ +VD A  L    E++G  P + +Y+ L+ G     + +E      KM ++ + P+ 
Sbjct: 528 CKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNA 587

Query: 309 VLYGVMIRGLSEAGKVKDAMKLL 331
               +++  L +  K K  + LL
Sbjct: 588 ASCTIVVDMLCKDEKYKKFVDLL 610



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 93/177 (52%), Gaps = 2/177 (1%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCE-KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +++  VS  S ++ + + G  K  DC  +A+E F ++K ++ + ++  Y+ +++   +  
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCK-NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  ++ ++ +    P++VT++++I+G  K G+ + A  + ++M + G  P+   Y 
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            ++ G C+ N+ +E  +L  KM     SP+  +   +++  CK  +  + + LL  F
Sbjct: 557 TLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 171/589 (29%), Positives = 279/589 (47%), Gaps = 64/589 (10%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q D  +YN +LN+        L   VY EM +    P++VTF+ L+  L ++ +   
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ ML+EM+  G+ P++ T+T ++ G  +      A R+  +M + GCSP  V  N L+N
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CKL RV++AL  ++    +GF P   +Y+  ++GL +      A      M +E  +P
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++  L + G++++A  +L+ M ERG +PD   +N LI   C    L++A  L 
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLA 383

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+ +TF ILI  +C+ G    A +LF +M+ +GC P    +N LID LC  
Sbjct: 384 RQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSL 443

Query: 427 GELEKANLLFYKMEIGKNP-------TLF------LRLSQGGNRVHDKASLQ-------- 465
           G+L KA  L  +ME    P       T+       +R+ +    V D+  LQ        
Sbjct: 444 GKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEE-AEEVFDQMDLQGISRNAIT 502

Query: 466 --TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C    I  A +++ Q+   G  P+ ITYNS++  +CK G+I  A  + + + 
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G   D VTYGTLINGL +  R + A ++   M   G   +P  Y  ++    RR    
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTR 622

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A +L+                   E  + GE  +A                  Y I   
Sbjct: 623 DAMNLF------------------REMTEVGEPPDAFT----------------YKIVFR 648

Query: 644 GLCQ-DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           GLC+  G ++EA +    +V+ K  +   S  +++      G L+L MD
Sbjct: 649 GLCRGGGSIREAFDFLLEMVD-KGFIPEFSSFRML----AEGLLNLGMD 692



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 261/550 (47%), Gaps = 37/550 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    +      A+    +M      PD   +  ++     +     AL V   M
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++ C P  VT ++LING  K G+ E A+  + +    G  P++ TY   ++GLCQ    
Sbjct: 247 LEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHV 306

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A ++   M   G  PD   YN ++N  CK  +++EA  +L    + G +P + +++ L
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L    R +EA    R++  + + PDV  + ++I  L + G  + A++L  +M+  G 
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI   C LG L +A  L  E+       +T T+  +I G+C+   +++A++
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F++M+  G   +   FN LIDGLCK   ++ AN L  +M           +S+G     
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQM-----------ISEGLQ--P 533

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  YC  G I KA  IL  +  +G   D++TY +LING CK G    ALKL 
Sbjct: 534 NNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLL 593

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR- 578
           + +++KG+R     Y  +I  L R +   DA  +F +M + G  P    YK +    CR 
Sbjct: 594 RGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRG 653

Query: 579 ----RRKFSL--------------AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN-- 618
               R  F                +F +  + L ++ G DD  +++IE  ++K ++ +  
Sbjct: 654 GGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNL-GMDDYFIRAIEIIIEKADLGDSD 712

Query: 619 --AIQGLLEM 626
             AI+G L++
Sbjct: 713 VSAIRGYLKI 722



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/565 (24%), Positives = 248/565 (43%), Gaps = 52/565 (9%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  +   Y  +++ L + ++      ++ +M + G  PD V +N L+   C+  +V  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + +L      G  P   +++ L+ G         A     +M E    P  V   V+I G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G+V+DA+  +      G  PD   YN  + G C  G +  A  +   + +    P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ I++  +C+NG +++A+ + N+M + GC P +  FN LI  LC    LE+A  L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 438 KMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           ++ + G +P ++              +   ++   C  G    A ++  ++  SG  PD 
Sbjct: 385 QVTLKGLSPDVY--------------TFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TYN+LI+  C +G +  AL L KE++  G    +VTY T+I+GL +  R E+A  +F Q
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M   G + +   + +L+   C+ ++                   D++ + I + + +G  
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRI------------------DDANQLISQMISEGLQ 532

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
            N I                 Y   L   C+ G +K+A +I   +      V   +   L
Sbjct: 533 PNNIT----------------YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I+GLCK G   +A+ +       G    P+  N +++S LF ++N +  A +L   M  V
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQS-LFRRNNTR-DAMNLFREMTEV 634

Query: 737 GYDLDACLYPKT-KSLLPGPWNTRE 760
           G   DA  Y    + L  G  + RE
Sbjct: 635 GEPPDAFTYKIVFRGLCRGGGSIRE 659



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 1/225 (0%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    +   +  D++    +S  +  F  LI G  K    + A + 
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M     QP+   YN++L    ++     A  +   M       ++VT+  LINGL K
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCK 582

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G+T+VA+K+L  M  +G+      Y  VI  L + N   +A  LF +M + G  PD   
Sbjct: 583 AGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFT 642

Query: 241 YNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           Y  +  G C+    + EA   L      GF+P   S+  L +GL 
Sbjct: 643 YKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL 687



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 36/222 (16%)

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           L G++ D+V Y  L+N L    + +    ++ +M + G  P    + +LM   CR  +  
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A  L L+ +       DE+                                  +T  + 
Sbjct: 203 TAV-LMLEEMSSSGVAPDETT---------------------------------FTTLMQ 228

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G  ++G +K AL + + ++E     T  +   LI+G CK G ++ A+      + NGF  
Sbjct: 229 GFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEP 288

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                N  +  L   ++    HA  ++  M   G+D D   Y
Sbjct: 289 DQITYNTFVNGL--CQNGHVGHALKVMDVMVQEGHDPDVFTY 328


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 170/586 (29%), Positives = 282/586 (48%), Gaps = 56/586 (9%)

Query: 123 KMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
           +M E  C P+V+ YN +L       R Q  L  L +  +       P++V+++ +ING  
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G ++ A     EM  RGILP+  TY  +I+ LC+    D+A  +   M  +G  PD +
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN++L+G+C   +  EA+  L+    DG  P + +YS L+D L +  R  EA   +  M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +  ++P++  YG +++G +  G + +   LL  M   GI PD Y ++ LI  +   G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           DQA  +  ++ ++   PN  T+  +I  +C++G V+DA   F +M   G  P   ++N+L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I GLC   + E+A  L  +M    I  N   F                 ++++ +C  G 
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFF----------------NSIIDSHCKEGR 491

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + ++ K+   +   G  P++ITYN+LING+C  G ++ A+KL   +   GL+P++VTY T
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LING  ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++      
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV------ 605

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             R  ES   IE                          L+ Y I L GLC++    +AL 
Sbjct: 606 --RITESGTQIE--------------------------LSTYNIILHGLCKNKLTDDALQ 637

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +F  L      +   +   +I  L K G  D A D+F+    NG +
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 44/537 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +KA  ++ +M +    PDV  YN+++    + Q    A+ V   MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +P+ +T++ +++G   SG+ + AI  L +M   G+ P+  TY++++  LC+  R  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  P+   Y  LL G+     + E   LL    ++G  P    +S LI
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +  + D+A   + KM ++ + P+ V YG +I  L ++G+V+DAM     M + G+ 
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+LI G C     ++A  L +E+  R    NT  F  +I   C+ G V +++KL
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F  M + G  P+V  +N LI+G C AG++++A  L   M  +G  P              
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP-------------- 544

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  T++  YC    +  A  +  ++  SG  PDIITYN ++ G  +      A +L+
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +   G + +  TY  +++GL +    +DA ++F    QN C         LM      
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLC---------LMDLKLEA 651

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV----------ENAI-QGLLE 625
           R F++     L+      GR+DE+      F   G V          EN I QGLLE
Sbjct: 652 RTFNIMIDALLKV-----GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 272/628 (43%), Gaps = 54/628 (8%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L    + +++I+ L K    D   + L+ 
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNT 256

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM+    +PDV  Y+ +++   +   
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
            + A  ++  M K    P I T+  L+ G +  G       +LD M + GI P+ + ++I
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +P+ V Y A++   CK  RV++A+        +G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI GL    +++ A     +M +  I  + + +  +I    + G+V ++ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ P+   YN LI G+C  G +D+A  L   +      PNT T++ LI G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 604

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +R+++ G ++                                    ++ TYN +++G CK
Sbjct: 605 VRITESGTQI------------------------------------ELSTYNIILHGLCK 628

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
               + AL++F+ L L  L+ ++ T+  +I+ L +V R ++A  +F     NG  P+   
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y+ LM  +   +            + D     D  M +  + E LQ+GE+  A   L  +
Sbjct: 689 YR-LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747

Query: 627 DFKLNDFQLAPYTIWL-IGLCQDGQVKE 653
           D K   F L   T  L I L   G+ +E
Sbjct: 748 DEK--HFSLEASTASLFIDLLSGGKYQE 773



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 272/596 (45%), Gaps = 43/596 (7%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +PD   Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    P+V  Y ++++GL +  + ++A++LL   +D R  G  PD   Y  +I GF   G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R  LP+  T+  +I  +C+   +D A ++ N M K G  P    +N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPT------LFLRLSQGG-----NRVHDK---- 461
           +++ G C +G+ ++A     KM   G  P       L   L + G      ++ D     
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 462 ------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +  T+++ Y T G + + + +L  +  +G  PD   ++ LI  + K G ++ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++ +GL P++VTYG +I  L +  R EDA   F QM   G +P   VY SL+  
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEV---ENAIQGLLEMDFKLN 631
            C   K+  A  L L+ L R I          I+   ++G V   E   + ++ +  K N
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
              +  Y   + G C  G++ EA+ + S +V         +   LI+G CK   ++ A+ 
Sbjct: 511 ---VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +F     +G  + P +  Y  +L+ L  ++  +   A  L  R+   G  ++   Y
Sbjct: 568 LFKEMESSG--VSPDIITYNIILQGLFQTR--RTAAAKELYVRITESGTQIELSTY 619



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 44/271 (16%)

Query: 77  NGFDLYWQTLDE---LRSGNVSVV----SDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           NG+ L  + +DE   L SG VSV     +  +  LI+GY K+   E AL  F +M+    
Sbjct: 519 NGYCLAGK-MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PD+  YN +L   F+ +    A  +Y  + +      + T++++++GL K+  T+ A++
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEA------------------YRL------ 225
           M   +    +     T+ I+I  L ++ R DEA                  YRL      
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 226 -----------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                      FL M+D+GC+ D    N ++    +   +  A   L   ++  F     
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + S  ID L    +Y E Y +  + ++  IE
Sbjct: 758 TASLFID-LLSGGKYQEYYRFLPEKYKSFIE 787


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 208/776 (26%), Positives = 347/776 (44%), Gaps = 88/776 (11%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           L+ L P L    V  ++   K+ +   +FF W +KR   +               +  + 
Sbjct: 66  LKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYK---------------HNMNC 110

Query: 82  YWQTLDELRSGNVSVVSD-VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           +   L+ L    V   +D +  ++I       +  +  +   ++        +Y  N +L
Sbjct: 111 FISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 170

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               + ++   A  +Y +M+     P+++TF+ LIN LSK GK   A  +L ++ Q  + 
Sbjct: 171 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 230

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTYT +I G C+    D A+ +F +M   GC P+ V Y+ L+NG C   RVDEAL +
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290

Query: 261 LRSF-----------------------------------EKDGFVPRLGSYSCLIDGLFR 285
           L                                      +K G  P + +Y+ LI GL R
Sbjct: 291 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             + + A   Y KM +E + P+ V Y  +I  L   G+   A+K+   M   G + +T  
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 410

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN +IKG C  G +++A  L  ++ K   LP   T+  LI G    G V++A +L + M+
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRV 458
           + GC P    +N L+ G  K G+LE A+  F +M E G NP       L    S+ G   
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530

Query: 459 HDKASLQTMVEQYCTAGL---------------IHKAYKILMQLAESGNLPDIITYNSLI 503
              + L+ M E  C   +                 +A KI  ++ E G LP++ITY +LI
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G C+ G    A K+F +++ +   P+  TY +LI GL +  + ++A R    M + GC 
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCE 646

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKSIE-EFLQKGEVEN 618
           P+   Y +L++  CR+ +F  A     Q ++D+  R    D E   S+     +  EV++
Sbjct: 647 PTLDTYSTLVSGLCRKGRFYEA----EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDH 702

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A++    ++ K     L+ Y   +  LC+ GQV+EA  +F  ++E +          L+ 
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           GL K G LDL M +        F   P +  Y++     S+  K + +  L  ++K
Sbjct: 763 GLLKEGELDLCMKLLHIMESKNFT--PNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 165/368 (44%), Gaps = 51/368 (13%)

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           ++   L+  + +  MV+ A+ L+ +M  +G  PS+  FN LI+ L K G++ +A L+  +
Sbjct: 164 YSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQ 223

Query: 439 M-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + +   +P +F              +  +++  +C    +  A+ +  ++ + G  P+ +
Sbjct: 224 IFQYDLSPDVF--------------TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY++LING C  G ++ AL + +E+  KG+ P   TY   I  L  ++ EE+A  +  +M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            + GC P+   Y +L++   R  K  +A  L+                   + L++G V 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLY------------------HKMLKEGLVP 371

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           N +                 Y   +  LC  G+   AL IF  +    ++    +  ++I
Sbjct: 372 NTVT----------------YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEII 415

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            GLC  G ++ AM +F   LK G +      N L+   L +K N   +A  LL  MK  G
Sbjct: 416 KGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL-TKGNVN-NAARLLDLMKENG 473

Query: 738 YDLDACLY 745
            + D   Y
Sbjct: 474 CEPDEWTY 481


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 291/649 (44%), Gaps = 86/649 (13%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++++G  K    +KA+E F +M    C+P +  YN V++          A   +  M+  
Sbjct: 25  IVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN 84

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C P+++ F+ LI+G  K+G+ +V   +L++  +R   P+ F YT VI G C+    D  
Sbjct: 85  GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG 143

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +++  +M  +GC PD  AY  L++  CKL RVDEA  L     K G +    ++  LI+ 
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L    + DEA   YR+M E   EP + +   +I  L +AGKV +A ++   +  + +   
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN+L+ G+C LG +D    L +++ + D+ P+  T+ IL+ G  R   +DDA +LF 
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-----------------EIGKNP 445
            +   GC P+   +  +I GL  A  +E+A   F +                   I +  
Sbjct: 324 LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEAC 383

Query: 446 TLFLRLSQGG------------------NRVHD----------------KASLQTMVEQY 471
            LF +L   G                   R+ D                + +   +++  
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C A ++  A K+  Q+ + G +PD ITY +LI+GF K   ++ A KL   +  KG  P +
Sbjct: 444 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 503

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VTYG++++G  ++D   +A  +  QM + GC P   ++ SL+++                
Sbjct: 504 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSY---------------- 547

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                             +L KG  E A Q L EM  +     +  YT  +  L   G+V
Sbjct: 548 ------------------YLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            EA ++F  ++E        +   +I    K G ++ A ++     K+G
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 189/710 (26%), Positives = 317/710 (44%), Gaps = 71/710 (10%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           I+   EP    ++ TT+     K   PQVG      A KR R   F   S VI    K  
Sbjct: 82  IDNGCEP--DVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTS-VIHGYCKAG 138

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             D  ++ L+E+ +      +  +FVLI    K+G  ++A E F +M++  C  D   + 
Sbjct: 139 DLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFM 198

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            ++           A  +Y EM++    P +     LI  L K+GK + A ++   +  +
Sbjct: 199 TLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAK 258

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            +  ++  Y  ++ G C++ R D+  +L L+M +    PD   YN L+ GF +  R+D+A
Sbjct: 259 KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDA 318

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L +     G  P   +Y+ +I GL+ A+R +EA A+    F+E +  DV+ Y  +I+G
Sbjct: 319 LELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF----FDEAL--DVISYTTVIKG 372

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L+++ ++ +A +L   ++  G  P+   Y A+I G    G ++       ++     +P 
Sbjct: 373 LADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPT 432

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLF 436
             T+T++I G+C+  M+ DA K+F +M + GC P    +  LIDG  KA ++++A  LL 
Sbjct: 433 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 492

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHD----------KASLQTMVEQYCTAGLI--------- 477
             +  G  PT        G+ VH           K  +  M E+ C  GL          
Sbjct: 493 VMLTKGPEPTAVTY----GSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 478 ------HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
                  +AY++L ++   G  PD+I Y SLI+     G +  A  +F  +  KG  PD+
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TYGT+I    ++   E A  I   M ++G  P    Y SLM    +  +   AF ++ +
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668

Query: 592 YLRD-----------------ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            +                     G+ D +    +E L+K EV                  
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPT--------------- 713

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           L  YTI + GL + G+V EA + F  +++   I    +   LI+ L K G
Sbjct: 714 LVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 242/522 (46%), Gaps = 55/522 (10%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI  L      D   +  ++L++   S     +  +I G  K G  E  L++F  M
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               C P    Y  V++   + Q+   A  V+ +MV+  C+P+ +T++ LI+G SK+ K 
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A K+LD M  +G  P   TY  ++ G C+++  +EA  +  +M++ GC P    + +L
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+ +    R +EA  +L      G  P +  Y+ LID LF   R  EA   +  M E+  
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD + YG +I+  S+ G V+ A ++L  M + G+ PD + YN+L+ G+  L  +DQA  
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFG 664

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGL 423
           +   +      PN  TF +L+ G+ ++G  D A  LF +M EK    P++  +  LIDGL
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            KAG + +A                   SQ           Q M+++             
Sbjct: 725 GKAGRVSEA------------------FSQ----------FQEMIDR------------- 743

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                  G +P+  TY SLI    K G I  A KL +++   G+ PD   Y  LI GL  
Sbjct: 744 -------GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLID 796

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
               + A+ +F +M + GC P+   YK L      RR F  A
Sbjct: 797 SSMVDTAWDVFQEMMKRGCAPNEVTYKVL------RRGFRAA 832



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 262/561 (46%), Gaps = 56/561 (9%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A+  L EM   G++P+     IV++GLC+  + D+A  LFL+M   GC P  V+YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G   + ++DEA     S   +G  P + +++ LI G  +A +    +    +   ++ 
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL-KRF 120

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDV LY  +I G  +AG +    K+L +M   G +PD   Y  LI   C LG +D+A  
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   + K   L +  TF  LI  +  +G +D+A +L+ +M + G  P + + ++LI  LC
Sbjct: 181 LFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALC 240

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KAG++++AN ++  +   K  T              + +  ++++ YC  G +    K+L
Sbjct: 241 KAGKVDEANEIYQTVVAKKVAT-------------SRVAYNSLMDGYCKLGRVDDGLKLL 287

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           +Q+ E  N PDI TYN L+ GF +   ++ AL+LFK L   G +P++ TY T+I GL   
Sbjct: 288 LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA 347

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R E+A   F +                           ++++  ++ L D S R DE+ 
Sbjct: 348 QRMEEAKAFFDEALD-----------------------VISYTTVIKGLAD-SKRIDEAC 383

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           +  E+    G   N +                 YT  + GL + G++++ L  F  +   
Sbjct: 384 ELFEKLKTAGCSPNVV----------------AYTAVIDGLLKAGRIEDGLKNFEDMSGS 427

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
             + T  +   +I GLCK   L  A  VF   ++ G +  P    Y      FSK +K  
Sbjct: 428 SCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV--PDTITYTTLIDGFSKASKMD 485

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A  LL  M + G +  A  Y
Sbjct: 486 EARKLLDVMLTKGPEPTAVTY 506



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/566 (24%), Positives = 260/566 (45%), Gaps = 56/566 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L++G+ +    + ALE F  +  + C+P+   Y  ++   +  Q    A A + E 
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA 360

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +      ++++++ +I GL+ S + + A ++ +++   G  PN   YT VI GL +  R 
Sbjct: 361 L------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRI 414

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++  + F  M  S C P    Y  +++G CK + + +A  +     + G VP   +Y+ L
Sbjct: 415 EDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTL 474

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  +A + DEA      M  +  EP  V YG ++ G  +   + +A ++++ MRERG 
Sbjct: 475 IDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC 534

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P  + + +L+  +   G  ++A  +  E+  R   P+   +T LI  +   G V +A+ 
Sbjct: 535 EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARH 594

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F+ M + GC P    +  +I    K G +E A  +   M + G  P  F          
Sbjct: 595 VFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCF---------- 644

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  ++++ Y     + +A+ +  ++  SG  P+ +T+N L++G  K G  + A  L
Sbjct: 645 ----AYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 700

Query: 519 FKE-LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           FKE L+   + P  V+Y  LI+GL +  R  +AF  F +M   G  P    Y SL+    
Sbjct: 701 FKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI---- 756

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
               +SLA           +GR  E+ K +E+ ++ G V   +Q                
Sbjct: 757 ----YSLA----------KAGRIPEAKKLVEDMVKLG-VNPDVQA--------------- 786

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVE 663
           Y+  + GL     V  A ++F  +++
Sbjct: 787 YSALITGLIDSSMVDTAWDVFQEMMK 812



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 22/381 (5%)

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +++A+  L +M   G++PD    N ++ G C    +D+A  L +E+      P   ++  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           +I G+     +D+A K FN M   GC P V  F  LI G CKAG+ +  ++L  +     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P +FL  S              ++  YC AG +   +KIL ++  +G +PD   Y  LI
Sbjct: 121 RPDVFLYTS--------------VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLI 166

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  CK+G ++ A +LF+ ++  G   D VT+ TLI  L    + ++A  ++ +M + G  
Sbjct: 167 DPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYE 226

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQG 622
           P   V  SL+   C+  K   A  ++   +         +  S+ + + + G V++ ++ 
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKL 286

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC- 681
           LL+M    N   +  Y I + G  +  ++ +AL +F +L          +   +I GL  
Sbjct: 287 LLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD 346

Query: 682 ------KRGYLDLAMDVFLYT 696
                  + + D A+DV  YT
Sbjct: 347 AQRMEEAKAFFDEALDVISYT 367



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 4/227 (1%)

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A   L ++  +G +PD++  N ++NG CK   I+ A++LF E+   G  P  V+Y T
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +I+GL  +D+ ++A++ F  M  NGC P    + +L+   C+  +  +   L  Q L+  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF 120

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
             R D  + +  I  + + G+++   + L EM         A Y + +  LC+ G+V EA
Sbjct: 121 --RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             +F  + +   +    + + LI  L   G LD A +++   ++ G+
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGY 225



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA NS ++   +K    D  +   D + +  +   +  F VL+ G +K G  ++A   F 
Sbjct: 644 FAYNS-LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 702

Query: 123 KMKEFDCQPDVYI-YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           +M E D  P   + Y  +++   +      A + + EM+    +P   T++ LI  L+K+
Sbjct: 703 EMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKA 762

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+   A K++++M + G+ P+   Y+ +I+GL   +  D A+ +F +M   GC+P+ V Y
Sbjct: 763 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 822

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             L  GF    R  +  A+ + F + G     GS
Sbjct: 823 KVLRRGFRAAGRALDLEAVKQHFSQ-GVAMEAGS 855


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/632 (26%), Positives = 306/632 (48%), Gaps = 21/632 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I    K   FD   + L E+R     + +  + VLI+G  + G  E+A      M++
Sbjct: 121 STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 180

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           +   PD + Y A++N   + +    A A+  EM      PN+V ++ LI+G  + G  + 
Sbjct: 181 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 240

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A KM+ EM   G+ PNK TY  ++ GLC++ + D A  L  +M      PD + YN ++ 
Sbjct: 241 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 300

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +     +A  LL   E  G  P + +YS +I GL ++   ++A     +M  + ++P
Sbjct: 301 GHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 360

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  +Y  +I G    G V  A ++   M +  ++PD YCYN+LI G   +G ++++    
Sbjct: 361 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 420

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +R  LPN  T++ LI G  +NG ++ A++L  +M   G  P+  ++  L++   K+
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 480

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQG---GNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            ++EK +  F  M           L QG    NR++       ++    ++G +  A+++
Sbjct: 481 DDIEKVSSTFKSM-----------LDQGVMLDNRIYG-----ILIHNLSSSGNMEAAFRV 524

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++ ++G++PD+  Y+SLI+G CK  +   A  +  E+  KG+ P+ V Y  LI+GL +
Sbjct: 525 LSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 584

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
                 A  +F  +   G  P+   Y SL+  SC+    S AF L+ + L      D   
Sbjct: 585 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 644

Query: 604 MKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
              +       G++E A+  + EM F      ++ +   + G C+ G+++E L +  V++
Sbjct: 645 YSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM 703

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
               +    +   +I GL + G L     +F+
Sbjct: 704 GRGLVPNALTIENIISGLSEAGKLSEVHTIFV 735



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 274/587 (46%), Gaps = 61/587 (10%)

Query: 117 ALESFGKMKEF----DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           A+    K++EF       PDVY Y+ ++    + + F  A  V  EM +  C  N VT++
Sbjct: 97  AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI GL +SG  E A     +M   G++P+ FTY  +I+GLC+  R++EA  L  +M  +
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 216

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
              P+ V Y  L++GF +    DEA  +++     G  P   +Y  L+ GL +  + D A
Sbjct: 217 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 276

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               ++M  +   PD + Y ++I G       KDA +LLS+M   GI P+ Y Y+ +I G
Sbjct: 277 SLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHG 336

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G  ++A  L  E+  +   PN   +  LI G CR G V  A ++F+KM K    P 
Sbjct: 337 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 396

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +  +N+LI GL K G +E++   F +M E G  P  F              +   ++  Y
Sbjct: 397 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF--------------TYSGLIHGY 442

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
              G +  A +++ ++ ++G  P+ + Y  L+  + K  +I      FK +  +G+  D+
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDN 502

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             YG LI+ L      E AFR+  ++ +NG  P   VY SL++  C+      AF +   
Sbjct: 503 RIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI--- 559

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                                          L EM  K  D  +  Y   + GLC+ G +
Sbjct: 560 -------------------------------LDEMSKKGVDPNIVCYNALIDGLCKSGDI 588

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLY 695
             A N+F+ ++  K +V  P+CV    LI G CK G  D++   +LY
Sbjct: 589 SYARNVFNSIL-AKGLV--PNCVTYTSLIDGSCKVG--DISNAFYLY 630



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 282/585 (48%), Gaps = 24/585 (4%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I   + L+  L ++    +  K+ + M   GI P+ +TY+ +I   C++   D A ++
Sbjct: 80  PSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV 139

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
            ++M++ GC  + V YN L+ G C+   V+EA    +  E  G VP   +Y  LI+GL +
Sbjct: 140 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 199

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           ++R +EA A   +M   +++P+VV+Y  +I G    G   +A K++ +M   G+ P+   
Sbjct: 200 SRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKIT 259

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ L++G C +G +D+A  L  ++ +    P+T T+ ++I G  R+    DA +L ++ME
Sbjct: 260 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEME 319

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
            AG  P+V  ++ +I GLC++GE EKA+ L  +M   G  P  F+               
Sbjct: 320 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV--------------Y 365

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  YC  G +  A +I  ++ +   LPD+  YNSLI G  KVG +  + K F ++Q 
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +GL P+  TY  LI+G  +    E A ++  +M   G  P+  +Y  L+    +      
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 485

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
             S +   L      D+      I      G +E A + L E++   +   +  Y+  + 
Sbjct: 486 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNG 700
           GLC+    ++A   F +L E       P+ V    LI GLCK G +  A +VF   L  G
Sbjct: 546 GLCKTADREKA---FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +  P    Y        K     +A++L   M + G   DA +Y
Sbjct: 603 LV--PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 645



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/626 (24%), Positives = 282/626 (45%), Gaps = 67/626 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I   ++    D  ++ + E+ +  V      +  L+ G  K+G  ++A     +M    
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +PD   YN ++   FR      A  +  EM      PN+ T+S++I+GL +SG+ E A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L+EMT +G+ PN F Y  +ISG C+      A  +F KM      PD   YN+L+ G 
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+ RV+E+       ++ G +P   +YS LI G  +    + A    ++M +  ++P+ 
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467

Query: 309 VLY-----------------------------------GVMIRGLSEAGKVKDAMKLLSD 333
           V+Y                                   G++I  LS +G ++ A ++LS+
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + + G VPD + Y++LI G C     ++A  +  E+ K+   PN   +  LI G+C++G 
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           +  A+ +FN +   G  P+   + +LIDG CK G++  A  L+ +M   G  P  F+   
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV--- 644

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                         +     +AG + +A  ++ ++   G+   I ++N+L++GFCK G +
Sbjct: 645 -----------YSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKM 692

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              LKL   +  +GL P+++T   +I+GL    +  +   IF ++ Q     +   + SL
Sbjct: 693 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSL 752

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
                 + K  L                D     I +  ++G ++ A+     +  K   
Sbjct: 753 FMDMINQGKIPL----------------DVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 796

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIF 658
              + Y   +  LC+ G++ EALN+ 
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLL 822



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 182/419 (43%), Gaps = 21/419 (5%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           ++F    +R  L +  + S +I   LK    +   Q +  +    +     ++  L+  Y
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K  D EK   +F  M +     D  IY  +++          A  V  E+ K   +P++
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +S LI+GL K+   E A  +LDEM+++G+ PN   Y  +I GLC+      A  +F  
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+ V Y +L++G CK+  +  A  L       G  P    YS L  G   A  
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A     +MF  +    +  +  ++ G  + GK+++ +KLL  +  RG+VP+      
Sbjct: 658 LEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM------------------CR 390
           +I G  + G L +  ++ VE+ ++ S      F+ L   M                  C+
Sbjct: 717 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 776

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN--PTL 447
            G +D A  L + +           + A++D LC+ G+L +A  L  +M+   N  PTL
Sbjct: 777 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 835



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 145/368 (39%), Gaps = 53/368 (14%)

Query: 41  TKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV 100
           + N +  FR      K   +      S++IS L K    +  +  LDE+    V      
Sbjct: 515 SGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 574

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G  K GD   A                 ++N++L                    
Sbjct: 575 YNALIDGLCKSGDISYARN---------------VFNSILAKGL---------------- 603

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN VT++ LI+G  K G    A  + +EM   GI P+ F Y+++ +G       +
Sbjct: 604 ----VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLE 659

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M   G      ++N L++GFCK  ++ E L LL      G VP   +   +I
Sbjct: 660 QAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 718

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL  A +  E +  + ++ ++  E                   +    L  DM  +G +
Sbjct: 719 SGLSEAGKLSEVHTIFVELQQKTSE----------------SAARHFSSLFMDMINQGKI 762

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P     + +I+  C  G LD+A  L+  I  + +     ++  ++  +CR G + +A  L
Sbjct: 763 P-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 821

Query: 401 FNKMEKAG 408
             +M+K G
Sbjct: 822 LKEMDKRG 829



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 27/330 (8%)

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLR-----LSQGGNRVHDKASLQTMVEQYCTAGL 476
           +C       AN L  KM     +P + L      LS  G+R    A L  +V+ Y  +G 
Sbjct: 5   MCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHR--SPAVLDVLVDTYKKSGR 62

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +  A ++++ + + G  P I   N+L+    +   +    K+ + +   G+ PD  TY T
Sbjct: 63  VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 122

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI    +V   + A ++  +M + GC  +   Y  L+   CR      AF     + +D+
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG----FKKDM 178

Query: 597 SGR----DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQD 648
                  D  +  ++   L K    N  + LL+   +++  +L P    Y   + G  ++
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLD---EMSCAELKPNVVVYANLIDGFMRE 235

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G   EA  +   +V         +   L+ GLCK G +D A  +    +++    RP   
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH--RPDTI 293

Query: 709 NY-LLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            Y L+    F   NKK  A+ LL  M++ G
Sbjct: 294 TYNLIIEGHFRHHNKK-DAFRLLSEMENAG 322


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 191/686 (27%), Positives = 310/686 (45%), Gaps = 27/686 (3%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLY 82
           PLLP      VT+VI   K+P      F    K    + + ++  +VI  L     F+  
Sbjct: 4   PLLP----KHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59

Query: 83  WQTLDELRS--GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
            + L ++R   GN  ++  V+   +  Y + G  ++A+  F +M  +DC+P V+ YNA++
Sbjct: 60  EEVLVDMRENVGN-HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIM 118

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           ++      F  A  VY  M      P++ +F++ +    K+ +   A+++L+ M+ +G  
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            N   Y  V+ G  + N   E Y LF KM  SG S     +N LL   CK   V E   L
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    K G +P L +Y+  I GL +    D A      + E+  +PDV+ Y  +I GL +
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             K ++A   L  M   G+ PD+Y YN LI G+C  G++  A  +  +      +P+  T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKM 439
           +  LI G+C  G  + A  LFN+    G  P+V ++N LI GL   G  LE A L     
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E G  P +               +   +V   C  G +  A  ++  +   G  PDI T+
Sbjct: 419 EKGLIPEV--------------QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N LI+G+     +  AL++   +   G+ PD  TY +L+NGL +  + ED    +  M +
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM--KSIEEFLQKGEVE 617
            GC P+   +  L+   CR RK   A  L L+ +++ S   D       I+ F + G+++
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGL-LEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 618 NAIQGLLEMDFKLNDFQLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
            A     +M+         P Y I +    +   V  A  +F  +V+        +   +
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFI 702
           + G CK G ++L     L  ++NGFI
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFI 669



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/594 (25%), Positives = 274/594 (46%), Gaps = 51/594 (8%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           R++SF   S       +P+      + L+ + S    +    +  ++ G+Y+     +  
Sbjct: 152 RMKSFCKTS-------RPHA---ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E FGKM        +  +N +L +  +K        +  +++K   LPN+ T++L I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            + G+ + A++M+  + ++G  P+  TY  +I GLC+ ++  EA     KM + G  PD 
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             YN L+ G+CK   V  A  ++     +GFVP   +Y  LIDGL      + A A + +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
              + I+P+V+LY  +I+GLS  G + +A +L ++M E+G++P+   +N L+ G C +G 
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +  A  L   +  +   P+  TF ILI G      +++A ++ + M   G  P V  +N+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLF---------------------LRLSQGGN 456
           L++GLCK  + E     +  M E G  P LF                     L   +  +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII-TYNSLINGFCKVGNINGA 515
              D  +  T+++ +C  G +  AY +  ++ E+  +     TYN +I+ F +  N+  A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            KLF+E+  + L PD  TY  +++G  +       ++   +M +NG  PS      ++  
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            C                  +  R  E+   I   +QKG V  A+  + ++D K
Sbjct: 682 LC------------------VEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKK 717



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/580 (23%), Positives = 236/580 (40%), Gaps = 56/580 (9%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR---ADEAYRLF 226
           T+  +I  L   GK E   ++L +M +   + N     + +  +    R     EA  +F
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M    C P   +YNA+++        D+A  +       G  P + S++  +    + 
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R   A      M  +  E +VV Y  ++ G  E     +  +L   M   G+      +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N L++  C  G + +   L  ++ KR  LPN  T+ + I G+C+ G +D A ++   + +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P V  +N LI GLCK  + ++A +   KM   G  P              D  +  
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP--------------DSYTYN 325

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  YC  G++  A +I+     +G +PD  TY SLI+G C  G  N AL LF E   K
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G++P+ + Y TLI GL       +A ++  +M + G  P    +  L+   C+    S A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
             L                  ++  + KG   +                +  + I + G 
Sbjct: 446 DGL------------------VKVMISKGYFPD----------------IFTFNILIHGY 471

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
               +++ AL I  V+++        +   L++GLCK    +  M+ +   ++ G     
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              N LL SL   +  K   A  LL  MK+   + DA  +
Sbjct: 532 FTFNILLESL--CRYRKLDEALGLLEEMKNKSVNPDAVTF 569


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 189/681 (27%), Positives = 321/681 (47%), Gaps = 52/681 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+ S  VS+ +  + +LI G  K  + + A     +M         Y+Y+  + +  +
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + +   A A++  M+    +P    ++ LI G  +        ++L EM +R I+ + +T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  V+ G+C     D AY +  +M  SGC P+ V Y  L+  F +  R  +A+ +L+  +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P +  Y+ LI GL +AKR DEA ++  +M E  ++P+   YG  I G  EA +  
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A K + +MRE G++P+      LI  +C  G + +A S    +  +  L +  T+T+L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G+ +N  VDDA+++F +M   G  P V  +  LI+G  K G ++KA+ +F +M E G  
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P + +                 ++  +C +G I KA ++L +++  G  P+ +TY ++I+
Sbjct: 660 PNVII--------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+CK G++  A +LF E++LKGL PDS  Y TL++G  R++  E A  IFG   + GC  
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCAS 764

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI-QGL 623
           S A + +L+ W  +  K  L                            K EV N +  G 
Sbjct: 765 STAPFNALINWVFKFGKTEL----------------------------KTEVLNRLMDGS 796

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            +   K ND     Y I +  LC++G ++ A  +F  +     + T  +   L++G  K 
Sbjct: 797 FDRFGKPND---VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           G       VF   +  G  + P    Y +    F K+     A  L+ +M +     D C
Sbjct: 854 GRRAEMFPVFDEAIAAG--IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 744 LYPKT--KSLLPGPWNTREME 762
               +  ++LL G     EME
Sbjct: 912 KLSISTCRALLSGFAKVGEME 932



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 59/542 (10%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           + KN + G+   +   KR  + S  +   V+  +      D  +  + E+ +        
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI  + +      A+    +MKE    PD++ YN+                     
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS--------------------- 492

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                         LI GLSK+ + + A   L EM + G+ PN FTY   ISG  + +  
Sbjct: 493 --------------LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A +   +M++ G  P+ V    L+N +CK  +V EA +  RS    G +    +Y+ L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GLF+  + D+A   +R+M  + I PDV  YGV+I G S+ G ++ A  +  +M E G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN L+ GFC  G +++A+ L  E+  +   PN  T+  +I G C++G + +A +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR-- 457
           LF++M+  G  P   ++  L+DG C+  ++E+A  +F                 G N+  
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-----------------GTNKKG 761

Query: 458 -VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG----NLPDIITYNSLINGFCKVGNI 512
                A    ++      G      ++L +L +        P+ +TYN +I+  CK GN+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +LF ++Q   L P  +TY +L+NG  ++ R  + F +F +    G  P   +Y  +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 573 MT 574
           + 
Sbjct: 882 IN 883



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 239/521 (45%), Gaps = 25/521 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I   L+ + F    + L E++   ++     +  LI G  K    ++A     +M E
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+ + Y A ++       F  A     EM +   LPN V  + LIN   K GK   
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A      M  +GIL +  TYT++++GL + ++ D+A  +F +M+  G +PD  +Y  L+N
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF KL  + +A ++     ++G  P +  Y+ L+ G  R+   ++A     +M  + + P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y  +I G  ++G + +A +L  +M+ +G+VPD++ Y  L+ G C L  +++A ++ 
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI- 754

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG-----MFNALID 421
               K+    +T  F  LI  + + G  +   ++ N++   G F   G      +N +ID
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD-GSFDRFGKPNDVTYNIMID 813

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            LCK G LE A  LF++M             Q  N +    +  +++  Y   G   + +
Sbjct: 814 YLCKEGNLEAAKELFHQM-------------QNANLMPTVITYTSLLNGYDKMGRRAEMF 860

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV-----TYGT 536
            +  +   +G  PD I Y+ +IN F K G    AL L  ++  K    D       T   
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L++G  +V   E A ++   M +    P  A    L+  SC
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 153/637 (24%), Positives = 266/637 (41%), Gaps = 96/637 (15%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           +FS L   L   G  E A+ +++ M +R     +   +IV        R  + +      
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV--------RCSQEF------ 144

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G S D V +  L +G+     ++EA+ +  S      VPRL     L+D L R  R 
Sbjct: 145 --VGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK---------------------DAM 328
           D  +  Y+ M E  +  DV  Y ++I     AG V+                      A+
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL---- 384
           KL   M  +G+VP  Y Y+ LI G C +  L+ A+SL VE+       + HT+++L    
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 385 -------------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                                          IC M + G+++ A+ LF+ M  +G  P  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             + +LI+G C+   + +   L  +M             +  N V    +  T+V+  C+
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEM-------------KKRNIVISPYTYGTVVKGMCS 429

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +  AY I+ ++  SG  P+++ Y +LI  F +      A+++ KE++ +G+ PD   
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y +LI GL +  R ++A     +M +NG  P+   Y + ++      +F+ A   +++ +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYVKEM 548

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           R+     ++ + +  I E+ +KG+V  A      M  +        YT+ + GL ++ +V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 652 KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            +A  IF    E +     P       LI+G  K G +  A  +F   ++ G  L P V 
Sbjct: 609 DDAEEIFR---EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVI 663

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            Y +    F +  +   A  LL  M   G   +A  Y
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 203/755 (26%), Positives = 325/755 (43%), Gaps = 71/755 (9%)

Query: 2   SSTLNEVLTILDTVTPI--EPALEP------LLPFLSKTTVTSVIMKTKNPQVGFRFFIW 53
           SST N    ++  ++ I   P  E       L P L    V +++   KN     RFF W
Sbjct: 41  SSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFW 100

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELR---------SGNVSVVSDVFFVL 104
            ++RK  +     S  +SML +    D  +   D +R          G V  V+     +
Sbjct: 101 ISRRKFFKH--DMSCFVSMLNRLVR-DRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEI 157

Query: 105 ISGY---YKVGDCEKALESFGKMKEFDCQPDVYI-------------YNAVLNIAFRKQL 148
            S Y   Y +      L   GK    D   D+YI             +N ++NI  +K  
Sbjct: 158 NSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR 217

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +   + + +  PN  T++ LI G  ++   ++A  M D M + G  PN  TY+ 
Sbjct: 218 VQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC   R +EA  +  +M   G  P    Y   L   C      EA+ LL   +K G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP + +++ LI GL R  +++ A   Y KM  + + P  V Y  +I  L   G+ + A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +   M   G +P T  YN +IK FC +G + +A  +  ++ K  S PN  T+  LI G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNP-- 445
           C+ G +++A +L   M+  G  P    +  LI G  + G+LE A  LFY  ME G +P  
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 446 --------------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                                LF ++ + GN +    +   M+  +     I +A     
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGN-LPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ + G LP++ITY S I+G C+ G    A K+F E++ +   P+  TY +LI GL +  
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 546 REEDA--FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           R EDA  + +  ++   GC P+   Y +L+   C   +   A     Q +  +  +  + 
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD----QLVVSMQKKGLQP 692

Query: 604 MKSIEEFLQKGE-----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            + I   L  GE     VE+A+     MD       L+ Y   +  LC++  ++EA  IF
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             ++E        +   L+ GL K G  DL + + 
Sbjct: 753 QTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLL 787



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 140/288 (48%), Gaps = 9/288 (3%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +   L+W+ ++   SGN+   S  + V+ISG+ K     +A    GKM +    P+V  Y
Sbjct: 535 DALALFWKMVE---SGNLPS-SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA--IKMLDEM 194
            + ++   R     LA  +++EM K N  PN+ T+S LI GL + G+ E A    +L  +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           T  G  PN  TYT ++ GLC   R  EA +L + M+  G  P    Y ALL G CK  +V
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           + AL +  S +  GF   L  Y  LI  L +    +EA   ++ M E+    D V + V+
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           + GL + G+    +KLL  M  R    +   Y  L +   +L  LD A
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR---ELSALDCA 815



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 191/435 (43%), Gaps = 26/435 (5%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH-TFTILICGMCRNG 392
           +R+R   P  +    +IK   + G + +      EI  +     T  +FT L+  + +  
Sbjct: 122 VRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFD 181

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIGKNPTLFL 449
           MVD A+ ++ KM  +G  PS+  FN +I+ LCK G +++A L+    ++ +   N   + 
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L  G  R H+                +  A+ +  ++ + G  P+ +TY++LING C  
Sbjct: 242 SLILGHCRNHN----------------LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A+ + +E+  KG+ P   TY   +  L       +A  + G+M + GC P+   +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
            +L++   R  KF +A  L+ + L D       +  + I +   +G  E A      M  
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
             +      Y   +   C  G +++A+ IF  +++  +     +   LI+G CK+G L+ 
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT 748
           AM +      NG  L+P    Y      FS+  K  HA  L   M   G   +   Y   
Sbjct: 466 AMRLLEIMKGNG--LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY--- 520

Query: 749 KSLLPGPWNTREMEN 763
            +++ G +N  ++++
Sbjct: 521 TAIIDGYFNLAKVDD 535


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 234/444 (52%), Gaps = 15/444 (3%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           QP +  +N +L+    K   + A+ ++ EMVK+   P+++T+S +INGL K G T +A++
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +L +M ++G  PN   Y  +I  LC+     EA   F +M   G  PD   Y+++L+GFC
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
            L RV+EA +L +   +   +P   +++ LIDGL + +   EA+  +  M E+ +EPDV 
Sbjct: 127 NLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVY 186

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  ++ G     ++ +A KL + M  +G  P+   YN LI G C  G +D+A+ L  E+
Sbjct: 187 TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEM 246

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +   P+  T++ L+ G C+ G   +AQ+L  +M   G  P++  ++ ++DGLCK G L
Sbjct: 247 SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHL 306

Query: 430 EKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++A  L   M+  K  P +F+                 ++E  CT G +  A ++   L 
Sbjct: 307 DEAFELLKAMQESKIEPNIFI--------------YTILIEGMCTFGKLEAARELFSNLF 352

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  P ++TY  +I+G  K G  N A +LF+E+ + G  P+S TY  +I G  R     
Sbjct: 353 VKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTP 412

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSL 572
           +A R+  +M   G +   + ++ L
Sbjct: 413 NAVRLIEEMVGKGFSADSSTFRML 436



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 234/439 (53%), Gaps = 15/439 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+SG         A++ F +M +   +PDV  Y+ ++N   +     +AL +  +M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C PN+V ++ +I+ L K      A+    EM + GI P+ FTY+ ++ G C + R 
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  LF +M +    P+ V +  L++G CK R + EA  +  +  + G  P + +Y+ L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG     + DEA   +  M  +   P+V  Y ++I G  ++G++ +A  LL++M  + +
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y+ L++GFC +G   +A+ L  E+     LPN  T++I++ G+C++G +D+A +
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           L   M+++   P++ ++  LI+G+C  G+LE A  LF  + + G  PT+           
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV----------- 360

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   M+      GL ++A ++  ++A +G LP+  TYN +I GF + G+   A++L
Sbjct: 361 ---VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 519 FKELQLKGLRPDSVTYGTL 537
            +E+  KG   DS T+  L
Sbjct: 418 IEEMVGKGFSADSSTFRML 436



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 214/481 (44%), Gaps = 51/481 (10%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P L +++ L+ GL    +  +A   + +M +   EPDV+ Y  +I GL + G   
Sbjct: 3   KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++LL  M E+G  P+   YN +I   C   L+ +A     E+ K    P+  T++ ++
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G C  G V++A  LF +M +    P+   F  LIDGLCK   + +A L+F  M E G  
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P ++              +   +V+ YC+   + +A K+   +   G  P++ +YN LIN
Sbjct: 183 PDVY--------------TYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILIN 228

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G CK G I+ A  L  E+  K L PD  TY TL+ G  +V R ++A  +  +M   G  P
Sbjct: 229 GHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP 288

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           +   Y  ++   C+      AF L                    + +Q+ ++E  I    
Sbjct: 289 NLITYSIVLDGLCKHGHLDEAFELL-------------------KAMQESKIEPNI---- 325

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        YTI + G+C  G+++ A  +FS L       T  +   +I GL K G
Sbjct: 326 -----------FIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
             + A ++F     NG +  P  C Y +    F ++    +A  L+  M   G+  D+  
Sbjct: 375 LSNEACELFREMAVNGCL--PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSST 432

Query: 745 Y 745
           +
Sbjct: 433 F 433



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 138/300 (46%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    +R  + +  + + +I  L K       W   + +    +      +  L+ GY 
Sbjct: 137 LFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYC 196

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                ++A + F  M    C P+V  YN ++N   +      A  +  EM   +  P+I 
Sbjct: 197 SRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIF 256

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T+S L+ G  + G+ + A ++L EM   G+LPN  TY+IV+ GLC+    DEA+ L   M
Sbjct: 257 TYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAM 316

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           ++S   P+   Y  L+ G C   +++ A  L  +    G  P + +Y+ +I GL +    
Sbjct: 317 QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLS 376

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +EA   +R+M      P+   Y V+I+G    G   +A++L+ +M  +G   D+  +  L
Sbjct: 377 NEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 4/169 (2%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L +  + S V+  L K    D  ++ L  ++   +     ++ +LI G    G  E A E
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F  +     QP V  Y  +++   +  L   A  ++ EM    CLPN  T++++I G  
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           ++G T  A+++++EM  +G   +  T+ +    L  +  +DE    F++
Sbjct: 407 RNGDTPNAVRLIEEMVGKGFSADSSTFRM----LSDLESSDEIISQFMR 451


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 189/681 (27%), Positives = 321/681 (47%), Gaps = 52/681 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+ S  VS+ +  + +LI G  K  + + A     +M         Y+Y+  + +  +
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + +   A A++  M+    +P    ++ LI G  +        ++L EM +R I+ + +T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  V+ G+C     D AY +  +M  SGC P+ V Y  L+  F +  R  +A+ +L+  +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P +  Y+ LI GL +AKR DEA ++  +M E  ++P+   YG  I G  EA +  
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A K + +MRE G++P+      LI  +C  G + +A S    +  +  L +  T+T+L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G+ +N  VDDA+++F +M   G  P V  +  LI+G  K G ++KA+ +F +M E G  
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P + +                 ++  +C +G I KA ++L +++  G  P+ +TY ++I+
Sbjct: 660 PNVII--------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+CK G++  A +LF E++LKGL PDS  Y TL++G  R++  E A  IFG   + GC  
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCAS 764

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI-QGL 623
           S A + +L+ W  +  K  L                            K EV N +  G 
Sbjct: 765 STAPFNALINWVFKFGKTEL----------------------------KTEVLNRLMDGS 796

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            +   K ND     Y I +  LC++G ++ A  +F  +     + T  +   L++G  K 
Sbjct: 797 FDRFGKPND---VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           G       VF   +  G  + P    Y +    F K+     A  L+ +M +     D C
Sbjct: 854 GRRAEMFPVFDEAIAAG--IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 744 LYPKT--KSLLPGPWNTREME 762
               +  ++LL G     EME
Sbjct: 912 KLSISTCRALLSGFAKVGEME 932



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 59/542 (10%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           + KN + G+   +   KR  + S  +   V+  +      D  +  + E+ +        
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI  + +      A+    +MKE    PD++ YN+                     
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS--------------------- 492

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                         LI GLSK+ + + A   L EM + G+ PN FTY   ISG  + +  
Sbjct: 493 --------------LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A +   +M++ G  P+ V    L+N +CK  +V EA +  RS    G +    +Y+ L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GLF+  + D+A   +R+M  + I PDV  YGV+I G S+ G ++ A  +  +M E G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN L+ GFC  G +++A+ L  E+  +   PN  T+  +I G C++G + +A +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR-- 457
           LF++M+  G  P   ++  L+DG C+  ++E+A  +F                 G N+  
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-----------------GTNKKG 761

Query: 458 -VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG----NLPDIITYNSLINGFCKVGNI 512
                A    ++      G      ++L +L +        P+ +TYN +I+  CK GN+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +LF ++Q   L P  +TY +L+NG  ++ R  + F +F +    G  P   +Y  +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 573 MT 574
           + 
Sbjct: 882 IN 883



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 239/521 (45%), Gaps = 25/521 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I   L+ + F    + L E++   ++     +  LI G  K    ++A     +M E
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+ + Y A ++       F  A     EM +   LPN V  + LIN   K GK   
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A      M  +GIL +  TYT++++GL + ++ D+A  +F +M+  G +PD  +Y  L+N
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF KL  + +A ++     ++G  P +  Y+ L+ G  R+   ++A     +M  + + P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y  +I G  ++G + +A +L  +M+ +G+VPD++ Y  L+ G C L  +++A ++ 
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI- 754

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG-----MFNALID 421
               K+    +T  F  LI  + + G  +   ++ N++   G F   G      +N +ID
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD-GSFDRFGKPNDVTYNIMID 813

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            LCK G LE A  LF++M             Q  N +    +  +++  Y   G   + +
Sbjct: 814 YLCKEGNLEAAKELFHQM-------------QNANLMPTVITYTSLLNGYDKMGRRAEMF 860

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV-----TYGT 536
            +  +   +G  PD I Y+ +IN F K G    AL L  ++  K    D       T   
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L++G  +V   E A ++   M +    P  A    L+  SC
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 153/637 (24%), Positives = 266/637 (41%), Gaps = 96/637 (15%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           +FS L   L   G  E A+ +++ M +R     +   +IV        R  + +      
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV--------RCSQEF------ 144

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G S D V +  L +G+     ++EA+ +  S      VPRL     L+D L R  R 
Sbjct: 145 --VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK---------------------DAM 328
           D  +  Y+ M E  +  DV  Y ++I     AG V+                      A+
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL---- 384
           KL   M  +G+VP  Y Y+ LI G C +  L+ A+SL VE+       + HT+++L    
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 385 -------------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                                          IC M + G+++ A+ LF+ M  +G  P  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             + +LI+G C+   + +   L  +M             +  N V    +  T+V+  C+
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEM-------------KKRNIVISPYTYGTVVKGMCS 429

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +  AY I+ ++  SG  P+++ Y +LI  F +      A+++ KE++ +G+ PD   
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y +LI GL +  R ++A     +M +NG  P+   Y + ++      +F+ A   +++ +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYVKEM 548

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           R+     ++ + +  I E+ +KG+V  A      M  +        YT+ + GL ++ +V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 652 KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            +A  IF    E +     P       LI+G  K G +  A  +F   ++ G  L P V 
Sbjct: 609 DDAEEIFR---EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVI 663

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            Y +    F +  +   A  LL  M   G   +A  Y
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 189/691 (27%), Positives = 327/691 (47%), Gaps = 62/691 (8%)

Query: 9   LTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS--FASN 66
           L+IL   +P +  L+         T     +++  P   F+ F    KR RLR      N
Sbjct: 125 LSILRLTSPSKALLD---------TAIGAYVQSGQPHHAFQIFK-KMKRLRLRPNLLTCN 174

Query: 67  SAVISMLLKPNGFDLYWQTL---DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           + + S++  P+   + +      D ++ G V  V + F ++I GY      + A+E    
Sbjct: 175 TLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV-NTFNIVIYGYCLENKFKDAVEFLNV 233

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M +++C PD   YN +L+   +K     A  +  +M     LPN  T+++L+ G  K G 
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A  +++ MTQ  +LP+ +TY ++I+GLC   R +EA++L  +M++    PD V+YN 
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+NG  +  ++ EA  LL    + G  P   +++ ++    +  + D+A     KM E  
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             PD V Y  +I G  +AG + +A + + +M  + +  D+   N +++  C    L++A 
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L     KR    +  ++  LI G  ++G VD A KL+++M++    PS   +N +I GL
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGL 533

Query: 424 CKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C+ G+ E+A + L   +E G  P              D+ +  T++  YC  G + KA++
Sbjct: 534 CQCGKTEQAISKLNELLESGLLP--------------DETTYNTILHGYCREGDVEKAFQ 579

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
              ++ E+   PD+ T N L+ G C  G +  ALKLF     KG   D+VTY TLI  L 
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  R +DAF +  +M +    P    Y +++T                  L D SGR  E
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT-----------------ALTD-SGRIRE 681

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFK----------LNDFQLAPYTIWLIGLCQDGQVK 652
           + + + + L+KG +   +   L++D             +D     Y+ W+  LC +G+ K
Sbjct: 682 AEEFMSKMLEKGXLPXQV---LQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +A+ IF    +    V   + + L+ GL KR
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGLIKR 769



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 260/549 (47%), Gaps = 58/549 (10%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSK---SGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           A  ++ +M +L   PN++T + L+N L +   S     + +  ++  + GI+PN  T+ I
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           VI G C  N+  +A      M    CSPD V YN +L+  CK  R+ +A  LL   +  G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P   +Y+ L+ G  +     EA      M +  + PDV  Y ++I GL   G++++A 
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL  +M    ++PD   YN LI G  +   + +A  L  E+ ++   PN  T  I++   
Sbjct: 334 KLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWY 393

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           C+ G +DDA     KME++G  P    +N LI+G CKAG + +A   F  M E+G+    
Sbjct: 394 CKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA---FRTMDEMGRK--- 447

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                   N   D  +L T++   C    + +AYK+L    + G   D ++Y +LI G+ 
Sbjct: 448 --------NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYF 499

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN++ ALKL+ E++ K + P +VTY  +I GL +  + E A     ++ ++G  P   
Sbjct: 500 KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDET 559

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ---GLL 624
            Y +++   CR                                  +G+VE A Q    ++
Sbjct: 560 TYNTILHGYCR----------------------------------EGDVEKAFQFHNKMV 585

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           E  FK + F      I L GLC +G +++AL +F+  V     +   +   LI  LCK G
Sbjct: 586 ENSFKPDVFTC---NILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 685 YLDLAMDVF 693
            LD A ++ 
Sbjct: 643 RLDDAFNLL 651



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 240/506 (47%), Gaps = 36/506 (7%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + + +L+ GY K+G  ++A      M + +  PDV+ YN ++N    +     A  +  E
Sbjct: 279 NTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDE 338

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M  L  LP++V+++ LING  +  K   A K+L+EM+++G+ PN  T+ I++   C+  +
Sbjct: 339 MENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D+A     KM++SG SPD V YN L+NG+CK   + EA   +    +        + + 
Sbjct: 399 MDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNT 458

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++  L R K+ +EAY       +     D V YG +I G  + G V  A+KL  +M+E+ 
Sbjct: 459 ILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I+P T  YN +I G C  G  +QA S   E+ +   LP+  T+  ++ G CR G V+ A 
Sbjct: 519 IIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAF 578

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +  NKM +    P V   N L+ GLC  G LEKA  LF              +S+G  + 
Sbjct: 579 QFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW-----------VSKG--KA 625

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T++   C  G +  A+ +L ++ E    PD  TYN++I      G I  A + 
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEF 685

Query: 519 FKELQLKGLRPDSV-----------------------TYGTLINGLQRVDREEDAFRIFG 555
             ++  KG  P  V                        Y   I  L    + +DA RIFG
Sbjct: 686 MSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFG 745

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  Q G T   + Y +LM    +RRK
Sbjct: 746 ESKQKGITVDKSTYINLMDGLIKRRK 771



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 241/519 (46%), Gaps = 52/519 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+K      I    Q  +   A+++F KMK     P+ +  N LLN   +          
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 261 LRSFE---KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +F    K G VP + +++ +I G     ++ +A  +   M +    PD V Y  ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L + G++ DA  LL DM+ RG++P+   YN L+ G+C +G L +A ++   + + + LP+
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ +LI G+C  G +++A KL ++ME     P V  +N LI+G  +  ++ +A  L  
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M E G  P              +  +   MV+ YC  G +  A   + ++ ESG  PD 
Sbjct: 373 EMSEKGVKP--------------NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TYN+LING+CK GN+  A +   E+  K ++ DSVT  T++  L R  + E+A+++   
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
             + G       Y +L+                + Y +D  G  D ++K  +E  +K  +
Sbjct: 479 ARKRGYFIDEVSYGTLI----------------VGYFKD--GNVDRALKLWDEMKEKEII 520

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
            + +                 Y   + GLCQ G+ ++A++  + L+E   +    +   +
Sbjct: 521 PSTVT----------------YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           +HG C+ G ++ A       ++N F      CN LLR L
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 277/591 (46%), Gaps = 36/591 (6%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG 78
            P+L+ L+P ++ + ++++     +PQ    FF W  ++   +    +   +  +L PNG
Sbjct: 65  HPSLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNG 124

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYN 137
           +    + +  L   +     +  FVL           + L S  + +  F  +  +  YN
Sbjct: 125 YLRIAENMRILMIKSTDSSENALFVL-----------EMLRSMNRRVDAFKFKLTLRCYN 173

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +L +  R  +     +VY EM+     PNI T + ++NG  K G    A   + ++ Q 
Sbjct: 174 MLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA 233

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+  + FTYT +I G C+    D A  +FL M + GC  + V+Y  L++GFC+ RRVDEA
Sbjct: 234 GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEA 293

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L     +D   P + +Y+ +I  L +  R  EA   +++M E+  +P+V  Y V+I  
Sbjct: 294 LKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICS 353

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L E     DA K+L+ M E+G++P    YNALI G+C  GL   A  +   +   +  PN
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+  LI G CR   +  A  L +KM +    P+V  +N LI G CK G+L  A  L  
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS 473

Query: 438 KM-EIGKNP----------------------TLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            M E G  P                      +LF  L + G +  ++    T+++ YC  
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA-NEVIYSTLIDGYCKV 532

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +     +L ++  +G +P+ ITYNSLI+G+CK  N   A  L   +  + + P + TY
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
             LI+ L + D  + A  +F QM   G  P   +Y + +   C   +   A
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA 643



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 188/718 (26%), Positives = 298/718 (41%), Gaps = 81/718 (11%)

Query: 29  LSKTTVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT 85
           L   T TS+I+   + KN       F+    +  LR+  S + +I    +    D   + 
Sbjct: 237 LDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKL 296

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
             ++   N       + V+I    ++G   +AL  F +M E  CQP+V+ Y  ++     
Sbjct: 297 FSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCE 356

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              F  A  +   M++   +P++VT++ LI+G  K G +  A+++L  M      PN  T
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I G C+     +A  L  KM +    P+ V YN L++G CK   +  A  LL    
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G VP   +YS  ID L +    +EA + +  + E+ I+ + V+Y  +I G  + GKV 
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           D   LL  M   G VP++  YN+LI G+C      +AR L   + KRD  P   T+TILI
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKN 444
             + ++   D A  +F++M   G  P V ++ A I   C  G L+ A +L  KM   G  
Sbjct: 597 DNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIM 656

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D       ++ Y   G I  A+ IL ++ E G  P   TY+ LI 
Sbjct: 657 P--------------DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIK 702

Query: 505 GFCKVG-----------------------------NINGALKLFKELQLKGLRPDSVTYG 535
                                              +    L LF ++   G  P++ TYG
Sbjct: 703 HLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYG 762

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             I GL +V   E A R+F  M + G +P+  +Y SL+  SC+   +  A   WL  +  
Sbjct: 763 KFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR-WLDIM-- 819

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
           I  R    + S +                               + L GL  +G  ++A 
Sbjct: 820 IENRHLPHLDSCK-------------------------------LLLCGLYDEGNDEKAK 848

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
            +F   ++C+          LI GL K+G  D   D+F      G  + P+  + L+ 
Sbjct: 849 RVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 165/410 (40%), Gaps = 66/410 (16%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            + L+   +     ++  LI GY KVG          KM    C P+   YN++++   +
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++ F  A  +   M+K +  P   T+++LI+ L K  + + A  M D+M   G  P+ F 
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFI 626

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT  I   C   R  +A  L  KM   G  PD + Y   ++ + +   +D A  +L+   
Sbjct: 627 YTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 266 KDGFVPRLGSYSCLIDGLFRAK------------------RYDEAYAWYR---------- 297
           + G  P   +YSCLI  L  AK                    D +  W R          
Sbjct: 687 EVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLF 746

Query: 298 -KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM E    P+   YG  I GL + G ++ A +L   M+E+G  P+   YN+L+   C L
Sbjct: 747 GKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQL 806

Query: 357 GLLDQA-RSLQVEIWKRDSLPNTHTFTILICGM--------------------------- 388
           GL  +A R L + I  R  LP+  +  +L+CG+                           
Sbjct: 807 GLYGEAIRWLDIMIENR-HLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMV 865

Query: 389 --------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                    + G+ D    LF  ME  GC      ++ LI+G     E++
Sbjct: 866 WKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 36/271 (13%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +L TMV  YC  G + +A   + ++ ++G   D  TY SLI G+C+  N++ A  +F  +
Sbjct: 206 TLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSM 265

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG   + V+Y  LI+G     R ++A ++F QM ++ C P+   Y  ++   C+    
Sbjct: 266 PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQL--- 322

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                          GR  E++   +E  +K    N                +  YT+ +
Sbjct: 323 ---------------GRKTEALNMFKEMTEKHCQPN----------------VHTYTVLI 351

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             LC+D    +A  I + ++E   I +  +   LI G CK+G    A+++      N   
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
              R  N L+      K+  K  A  LL +M
Sbjct: 412 PNARTYNELILGFCRGKNIHK--AMSLLHKM 440



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 3/213 (1%)

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN L+    +   I+    ++ E+    + P+  T  T++NG  ++    +A     ++ 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVE 617
           Q G +     Y SL+   CR +    A +++L        R++ S  + I  F +   V+
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
            A++   +M        +  YT+ +  LCQ G+  EALN+F  + E        +   LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             LC+    D A  +    L+ G I  P V  Y
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLI--PSVVTY 382


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 200/721 (27%), Positives = 316/721 (43%), Gaps = 113/721 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFA---SNSAVISMLLKPNGFDLYWQTLDELRSGNVSV 96
           +  +P++G  FF WA+K+    ++    S S+++ +L +   F      L  ++S ++  
Sbjct: 40  QIHDPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMP 99

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
             + F ++IS +   G  ++ALE +   +K   C PDV+  N++LN+  +     +A  V
Sbjct: 100 TREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKV 159

Query: 156 YYEMVKLN-----------------------------------CLPNIVTFSLLINGLSK 180
           Y EMV  N                                   C+PNIV ++ LI+G  K
Sbjct: 160 YDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCK 219

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--------- 231
            G TE A  +  E+  +G LP   TY  +I+G C+  + +   +L ++M +         
Sbjct: 220 KGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHI 279

Query: 232 --------------------------SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
                                     SGC PD   YN L+ G C    V +A  LL    
Sbjct: 280 YNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAI 339

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G +P   SY+ LI    +   Y  A     KM E   +PD+V Y  +I GL  AG+V 
Sbjct: 340 KRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVD 399

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A+ + + M E+G++PD   YN L+ G C  G L  A+ L  E+  ++  P+      L+
Sbjct: 400 VALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLV 459

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G  R+G  ++A+KLF    + G  P V  +NA+I G CK G ++ A L F +M  G + 
Sbjct: 460 DGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHS 519

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         D+ +  T+++ Y     +H A ++   + +    P+++TY  LING
Sbjct: 520 P-------------DEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           FC  G+IN A K FK++    L+P+ VTY  LI    +      A   F QM    C P+
Sbjct: 567 FCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPN 626

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGL 623
              Y  LM        F ++           + R +++  S  +E F           G+
Sbjct: 627 DVTYNYLMNGLTNNVDFVIS-----------NQRSEQTENSLVLESF-----------GM 664

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +  D    D + A Y   LI LCQ   VK AL++   ++    +  P S V L+HGLC  
Sbjct: 665 MISDGW--DRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLE 722

Query: 684 G 684
           G
Sbjct: 723 G 723



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 218/487 (44%), Gaps = 40/487 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+G+ K G  E   +   +M E      ++IYN +++  F+    + A      M
Sbjct: 244 TYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWM 303

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K  C P++ T+++LI G    G+   A ++L++  +RG+LPNK +YT +I   C+    
Sbjct: 304 IKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEY 363

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L +KM + G  PD V Y AL++G      VD AL +     + G +P    Y+ L
Sbjct: 364 LRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVL 423

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL +  R   A     +M ++ + PD  +   ++ G    G  ++A KL     E+GI
Sbjct: 424 MSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGI 483

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YNA+IKG+C  G++  A      + +    P+  T++ +I G  +   +  A +
Sbjct: 484 DPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALR 543

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL----S 452
           +F  M K  C P+V  +  LI+G C +G++ +A   F +M    +  N   +  L     
Sbjct: 544 MFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFC 603

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT-------------- 498
           +G N     +  + M+ + C    +   Y  LM    + N+  +I+              
Sbjct: 604 KGVNLTKACSFFEQMLMEKCLPNDV--TYNYLMN-GLTNNVDFVISNQRSEQTENSLVLE 660

Query: 499 ----------------YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
                           YNS++   C+   +  AL L  ++  KG  PD V+   L++GL 
Sbjct: 661 SFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLC 720

Query: 543 RVDREED 549
              R +D
Sbjct: 721 LEGRSQD 727



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 203/478 (42%), Gaps = 98/478 (20%)

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA--------------------------- 362
           LL  M+ + ++P    ++ +I  F D GL+D+A                           
Sbjct: 88  LLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147

Query: 363 -RSLQVEIW--------KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
            +  +VEI          R+   + +T  I++ G+C+ G V+D  KL  K    GC P++
Sbjct: 148 VKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNI 207

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEI-GKNPT----------------------LFLR 450
             +N LIDG CK G+ E+AN+LF ++++ G  PT                      L + 
Sbjct: 208 VFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVE 267

Query: 451 LSQGGNRVH----------------------------------DKASLQTMVEQYCTAGL 476
           +S+ G  V                                   D A+   ++   C+ G 
Sbjct: 268 MSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGE 327

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +HKA ++L Q  + G LP+ ++Y  LI+ +CK G    AL L  ++  +G +PD VTY  
Sbjct: 328 VHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAA 387

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RD 595
           LI+GL      + A  +  +M + G  P   +Y  LM+  C++ +   A  L  + L ++
Sbjct: 388 LIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQN 447

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEA 654
           ++     +   ++ F++ G+ E A + L E+  +   D  +  Y   + G C+ G +K+A
Sbjct: 448 VAPDAFITATLVDGFIRHGDFEEA-KKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDA 506

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L  F  +++        +   +I G  K   L  A+ +F   +K     +P V  Y L
Sbjct: 507 LLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGA--CKPNVVTYTL 562



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 165/384 (42%), Gaps = 23/384 (5%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
             I  ++R       + +A+I  L+     D+     +++    V   ++++ VL+SG  
Sbjct: 369 LLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLC 428

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G    A     +M + +  PD +I   +++   R   F  A  ++   ++    P +V
Sbjct: 429 KKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVV 488

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            ++ +I G  K G  + A+     M Q    P++FTY+ +I G  ++N    A R+F  M
Sbjct: 489 GYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLM 548

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
               C P+ V Y  L+NGFC    ++ A    +        P + +Y+ LI    +    
Sbjct: 549 VKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNL 608

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A +++ +M  EK  P+ V Y  ++ GL+      +   ++S+ R           N+L
Sbjct: 609 TKACSFFEQMLMEKCLPNDVTYNYLMNGLT-----NNVDFVISNQRSEQT------ENSL 657

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +        L+    +  + W R +       +ILIC +C++ MV  A  L +KM   G 
Sbjct: 658 V--------LESFGMMISDGWDRRAASYN---SILIC-LCQHKMVKHALHLRDKMMSKGF 705

Query: 410 FPSVGMFNALIDGLCKAGELEKAN 433
            P      AL+ GLC  G  +  N
Sbjct: 706 LPDPVSLVALLHGLCLEGRSQDWN 729


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 203/755 (26%), Positives = 324/755 (42%), Gaps = 71/755 (9%)

Query: 2   SSTLNEVLTILDTVTPI--EPALEP------LLPFLSKTTVTSVIMKTKNPQVGFRFFIW 53
           SST N    ++  ++ I   P  E       L P L    V +++   KN     RFF W
Sbjct: 41  SSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFW 100

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELR---------SGNVSVVSDVFFVL 104
            ++RK  +     S  +SML +    D  +   D +R          G V  V+     +
Sbjct: 101 ISRRKFFKH--DMSCFVSMLNRLVR-DRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEI 157

Query: 105 ISGY---YKVGDCEKALESFGKMKEFDCQPDVYI-------------YNAVLNIAFRKQL 148
            S Y   Y +      L   GK    D   D+YI             +N ++NI  +K  
Sbjct: 158 NSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGR 217

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +   + + +  PN  T++ LI G  ++   ++A  M D M + G  PN  TY+ 
Sbjct: 218 VQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST 277

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC   R +EA  +  +M   G  P    Y   L   C      EA+ LL   +K G
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRG 337

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP + +++ LI GL R  +++ A   Y KM  + + P  V Y  +I  L   G+ + A 
Sbjct: 338 CVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAF 397

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +   M   G +P T  YN +IK FC +G + +A  +  ++ K  S PN  T+  LI G 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGY 457

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNP-- 445
           C+ G +++A +L   M+  G  P    +  LI G  + G+LE A  LFY  ME G +P  
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517

Query: 446 --------------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                                LF ++ + GN +    +   M+  +     I +A     
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGN-LPSSQTYNVMISGFSKTNSISEAENFCG 576

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ + G LP++ITY S I+G C+ G    A K+F E++ +   P+  TY +LI GL +  
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEG 636

Query: 546 REEDA--FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           R EDA  + +  ++   GC P+   Y +L+   C   +   A     Q +  +  +  + 
Sbjct: 637 RAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD----QLVVSMQKKGLQP 692

Query: 604 MKSIEEFLQKGE-----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            + I   L  GE     VE+A+     MD       L+ Y   +  LC++  ++EA  IF
Sbjct: 693 SEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIF 752

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             ++E            L+ GL K G  DL + + 
Sbjct: 753 QTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLL 787



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 141/288 (48%), Gaps = 9/288 (3%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +   L+W+ ++   SGN+   S  + V+ISG+ K     +A    GKM +    P+V  Y
Sbjct: 535 DALALFWKMVE---SGNLPS-SQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA--IKMLDEM 194
            + ++   R     LA  +++EM K N  PN+ T+S LI GL + G+ E A    +L  +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           T  G  PN  TYT ++ GLC   R  EA +L + M+  G  P    Y ALL G CK  +V
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           + AL +  S +  GF   L  Y  LI  L +    +EA   ++ M E+    D V++ V+
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVL 770

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           + GL + G+    +KLL  M  R    +   Y  L +   +L  LD A
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR---ELSALDCA 815



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 191/435 (43%), Gaps = 26/435 (5%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH-TFTILICGMCRNG 392
           +R+R   P  +    +IK   + G + +      EI  +     T  +FT L+  + +  
Sbjct: 122 VRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFD 181

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIGKNPTLFL 449
           MVD A+ ++ KM  +G  PS+  FN +I+ LCK G +++A L+    ++ +   N   + 
Sbjct: 182 MVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYT 241

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L  G  R H+                +  A+ +  ++ + G  P+ +TY++LING C  
Sbjct: 242 SLILGHCRNHN----------------LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A+ + +E+  KG+ P   TY   +  L       +A  + G+M + GC P+   +
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
            +L++   R  KF +A  L+ + L D       +  + I +   +G  E A      M  
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLS 405

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
             +      Y   +   C  G +++A+ IF  +++  +     +   LI+G CK+G L+ 
Sbjct: 406 HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNN 465

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT 748
           AM +      NG  L+P    Y      FS+  K  HA  L   M   G   +   Y   
Sbjct: 466 AMRLLEIMKGNG--LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY--- 520

Query: 749 KSLLPGPWNTREMEN 763
            +++ G +N  ++++
Sbjct: 521 TAIIDGYFNLAKVDD 535


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/572 (28%), Positives = 270/572 (47%), Gaps = 86/572 (15%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA +Y MV++N  P++  F   +   +K  +    + + ++M   G+  N ++  ++I+
Sbjct: 72  ALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLIN 131

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC++N  D A  +  KM   G  P    +NAL+NG C   ++ EA+ L     + G  P
Sbjct: 132 CLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + SY+ +I+GL +      A   ++KM +   +PDVV Y  +I  L +   V DAM+ L
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M +RGI P+ + YN ++ GFC LG L++A  L  E+  RD +P+T T TIL+ G+C+ 
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKE 311

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           GMV +A+ +F  M + G  P++  +NAL+DG C    + +A  +F               
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF--------------- 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                        + M+ Q C                     P + +YN LINGFCK   
Sbjct: 357 -------------EIMIRQGCA--------------------PGVHSYNILINGFCKSRR 383

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A  L  E+  K L PD+VTY TL+ GL +  R ++A  IF +M   G  P+   Y  
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+                   G  DE++K ++   +K    N +           
Sbjct: 444 LLDGFCKH------------------GHLDEALKLLKSMQEKKLEPNIVH---------- 475

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 +TI + G+   G+++ A  +FS L       T  +   +I GL K G  D A D
Sbjct: 476 ------HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDN 721
           +F     +GF+  P  C+Y  +++  L ++D+
Sbjct: 530 LFRKMEDDGFL--PNSCSYNVMIQGFLQNQDS 559



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 237/467 (50%), Gaps = 15/467 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F    +VY  N ++N   R      A+++  +M KL   P   TF+ LINGL   G
Sbjct: 113 QMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEG 172

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+++ +EM +RG  PN  +Y  +I+GLC+      A  +F KM+ +GC PD V YN
Sbjct: 173 KIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYN 232

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++  CK R V++A+  L      G  P + +Y+C++ G     + +EA   +++M   
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PD V   +++ GL + G V +A  +   M E+G+ P+   YNAL+ G+C   L+++A
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           + +   + ++   P  H++ ILI G C++  +D+A+ L  +M      P    ++ L+ G
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LC+ G  ++A  +F +M   G  P L               +   +++ +C  G + +A 
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNL--------------VTYSILLDGFCKHGHLDEAL 458

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+L  + E    P+I+ +  LI G    G +  A +LF +L   G+RP   TY  +I GL
Sbjct: 459 KLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGL 518

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +    ++A+ +F +M  +G  P+   Y  ++    + +  S A  L
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 565



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 268/536 (50%), Gaps = 16/536 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M   + +P V  +   L    +K+ +   +++  +M       N+ + ++L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +    + A+ +L +M + GI P   T+  +I+GLC   +  EA  LF +M   G 
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ ++YN ++NG CK      A+ + +  E++G  P + +Y+ +ID L + +  ++A  
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +  +M +  I P+V  Y  M+ G    G++ +A +L  +M  R ++PDT     L+ G C
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++ +AR +   + ++   PN  T+  L+ G C   ++++A+K+F  M + GC P V 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI+G CK+  +++A  L  +M     NP              D  +  T+++  C 
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNP--------------DTVTYSTLMQGLCQ 415

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G   +A  I  ++   G LP+++TY+ L++GFCK G+++ ALKL K +Q K L P+ V 
Sbjct: 416 FGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           +  LI G+    + E A  +F ++  +G  P+   Y  ++    +      A+ L+ +  
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            D    +  S    I+ FLQ  +   AI+ + EM  K     L+ + + L    QD
Sbjct: 536 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQD 591



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 240/474 (50%), Gaps = 15/474 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L + N  D     L ++    +   +  F  LI+G    G  ++A+E F +M  
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+V  YN ++N   +     +A+ V+ +M +  C P++VT++ +I+ L K      
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++ L EM  RGI PN FTY  ++ G C + + +EA RLF +M      PD V    L++
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   V EA  +  +  + G  P + +Y+ L+DG    +  +EA   +  M  +   P
Sbjct: 307 GLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAP 366

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V  Y ++I G  ++ ++ +A  LL++M  + + PDT  Y+ L++G C  G   +A ++ 
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+     LPN  T++IL+ G C++G +D+A KL   M++    P++     LI+G+  A
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA 486

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G+LE A  LF K+   G  PT+               +   M++     GL  +AY +  
Sbjct: 487 GKLEVAKELFSKLFADGIRPTI--------------RTYTVMIKGLLKEGLSDEAYDLFR 532

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           ++ + G LP+  +YN +I GF +  + + A++L  E+  K    +  T+  L++
Sbjct: 533 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 197/402 (49%), Gaps = 14/402 (3%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A A + +M      P V  +G  +   ++  +    + L + M   G+  + Y  N L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C L  +D A S+  +++K    P   TF  LI G+C  G + +A +LFN+M + G 
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+V  +N +I+GLCK G    A  +F KME            Q G +  D  +  T+++
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKME------------QNGCKP-DVVTYNTIID 236

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C   L++ A + L ++ + G  P++ TYN +++GFC +G +N A +LFKE+  + + P
Sbjct: 237 SLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMP 296

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D+VT   L++GL +     +A  +F  M + G  P+ + Y +LM   C +R  + A  ++
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 590 LQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
              +R        S    I  F +   ++ A   L EM  K  +     Y+  + GLCQ 
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           G+ KEALNIF  +     +    +   L+ G CK G+LD A+
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 148/382 (38%), Gaps = 63/382 (16%)

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           ++L    E GI P ++ +             +          ++ SLP  +     +   
Sbjct: 18  RILQQHMEMGIFPSSFLF------------FNHHHISTSACTRKPSLPQNNGG--FVSNN 63

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
             N  +DDA   F +M +    PSV  F   +    K  +      L  +M+      LF
Sbjct: 64  STNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMD------LF 117

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                     H+  SL  ++   C    +  A  IL ++ + G  P   T+N+LING C 
Sbjct: 118 -------GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCN 170

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G I  A++LF E+  +G  P+ ++Y T+INGL +      A  +F +M QNGC P    
Sbjct: 171 EGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVT 230

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           Y +++   C+ R                    +++M+ + E L +G   N          
Sbjct: 231 YNTIIDSLCKDRLV------------------NDAMEFLSEMLDRGIPPNVFT------- 265

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
                    Y   + G C  GQ+ EA  +F  +V    +    +   L+ GLCK G +  
Sbjct: 266 ---------YNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316

Query: 689 AMDVFLYTLKNGFILRPRVCNY 710
           A  VF    + G  + P +  Y
Sbjct: 317 ARLVFETMTEKG--VEPNISTY 336


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 270/597 (45%), Gaps = 66/597 (11%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           N       F W   +   R SF     +I  L     F    + L +++   +     +F
Sbjct: 90  NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149

Query: 102 FVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
             ++  Y K G   +      +M+  + C+P    YN VL I        +A  V+Y+M+
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P + TF +++       + + A+ +L +MT+ G +PN   Y  +I  L + NR +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA +L  +M   GC PD   +N ++ G CK  R++EA  ++      GF P   +Y  L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD-------------- 326
           +GL +  R D A    + +F    +P++V++  +I G    G++ D              
Sbjct: 330 NGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385

Query: 327 ----------------------AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
                                 A+++L DMR +G  P+ Y Y  L+ GFC LG +D+A +
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  E+      PNT  F  LI   C+   + +A ++F +M + GC P V  FN+LI GLC
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505

Query: 425 KAGELEKA-----------------------NLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           +  E++ A                       N    + EI +   L   +   G+ + D+
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL-DE 564

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++  C AG + KA  +  ++   G+ P  I+ N LING C+ G +  A++  KE
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + L+G  PD VT+ +LINGL R  R ED   +F ++   G  P    + +LM+W C+
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 269/563 (47%), Gaps = 51/563 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +L+  N   +      ++ S  +      F V++  +  V + + AL   
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  IY  +++   +      AL +  EM  + C+P+  TF+ +I GL K 
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--------- 232
            +   A KM++ M  RG  P+  TY  +++GLC+I R D A  LF ++            
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360

Query: 233 -----------------------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                                  G  PD   YN+L+ G+ K   V  AL +L      G 
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + SY+ L+DG  +  + DEAY    +M  + ++P+ V +  +I    +  ++ +A++
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  +M  +G  PD Y +N+LI G C++  +  A  L  ++     + NT T+  LI    
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A+KL N+M   G       +N+LI GLC+AGE++KA  LF KM         L
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM---------L 591

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R     + +    S   ++   C +G++ +A +   ++   G+ PDI+T+NSLING C+ 
Sbjct: 592 RDGHAPSNI----SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I   L +F++LQ +G+ PD+VT+ TL++ L +     DA  +  +  ++G  P+   +
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707

Query: 570 KSLMTWSC------RRRKFSLAF 586
             L+          RRR ++ AF
Sbjct: 708 SILLQSIIPQETLDRRRFYNAAF 730



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 224/493 (45%), Gaps = 54/493 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   +Y +V+  L   N    A  +F  M      P    +  ++  FC +  +D AL+L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           LR   K G VP    Y  LI  L +  R +EA     +MF     PD   +  +I GL +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++ +A K+++ M  RG  PD   Y  L+ G C +G +D A+ L   I K    P    
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           F  LI G   +G +DDA+ + + M  + G  P V  +N+LI G  K G +  A  + + M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 440 E-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
              G  P ++              S   +V+ +C  G I +AY +L +++  G  P+ + 
Sbjct: 416 RNKGCKPNVY--------------SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           +N LI+ FCK   I  A+++F+E+  KG +PD  T+ +LI+GL  VD  + A  +   M 
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G   +   Y +L                                  I  FL++GE++ 
Sbjct: 522 SEGVVANTVTYNTL----------------------------------INAFLRRGEIKE 547

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A + + EM F+ +      Y   + GLC+ G+V +A ++F  ++      +  SC  LI+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607

Query: 679 GLCKRGYLDLAMD 691
           GLC+ G ++ A++
Sbjct: 608 GLCRSGMVEEAVE 620



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 57/550 (10%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD---EAYRLF 226
            + +LI  L  +G+ +   ++L +M   GI+   F  ++ IS +   ++A    +  RL 
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIV---FKESLFISIMRDYDKAGFPGQTTRLM 169

Query: 227 LKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           L+M++   C P F +YN +L           A  +          P L ++  ++     
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA 229

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               D A +  R M +    P+ V+Y  +I  LS+  +V +A++LL +M   G VPD   
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAET 289

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N +I G C    +++A  +   +  R   P+  T+  L+ G+C+ G VD A+ LF ++ 
Sbjct: 290 FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K    P + +FN LI G    G L+ A  +   M                  V D  +  
Sbjct: 350 K----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI------------VPDVCTYN 393

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +++  Y   GL+  A ++L  +   G  P++ +Y  L++GFCK+G I+ A  +  E+   
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+P++V +  LI+   +  R  +A  IF +MP+ GC P    + SL++  C   +   A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
             LWL  LRD+              + +G V N +                 Y   +   
Sbjct: 514 --LWL--LRDM--------------ISEGVVANTVT----------------YNTLINAF 539

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            + G++KEA  + + +V   + +   +   LI GLC+ G +D A  +F   L++G     
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 706 RVCNYLLRSL 715
             CN L+  L
Sbjct: 600 ISCNILINGL 609


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 245/488 (50%), Gaps = 52/488 (10%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           MK  +  PD+  YN ++N   +++    A+ +  EM   +C PN  T+ +L++GL K G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E A+++L EM ++G+  +   Y+ +ISG C     D    LF +M + G SP+ V Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+NGFCK     EA A+L +  + G  P + +Y+C+I GL +  R  +A   +  M E+ 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG------------------------- 338
            EP  V Y V+I GL + G + DA K+   M E+G                         
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 339 ------------IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
                       + PD   +N +I+G C  G LD+A  +   + +R S  N  T  ILI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP 445
              ++G++D A +L+ ++ K G  PS   ++ +IDG CK   L  A  LF +M+I G +P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           TLF                 T++   C    + +A ++  ++ ES   PD I++N +I+G
Sbjct: 361 TLF--------------DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDG 406

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             K G+I+ A +L  ++Q  GL PD+ TY + IN L ++ + E+A   F  M  +G TP 
Sbjct: 407 TLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPD 466

Query: 566 PAVYKSLM 573
             VY SL+
Sbjct: 467 NHVYDSLI 474



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 165/566 (29%), Positives = 278/566 (49%), Gaps = 19/566 (3%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L    S + +I+ L K    +     L E+   +    S  + +L+ G  K G  E+A+ 
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
             G+MK    + DV +Y+ +++    K       A++ EM++    PN+V +S LING  
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G    A  +L  MT+RGI P+ +TYT +I GLC+  RA +A  LF  M + G  P  V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L+NG CK   + +A  +  +  + G    + SY+ LI GL    + DEA   +  +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 300 FEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            E+   +EPDV+ +  +I+GL + G++  A+++   M ERG   + +  + LI  +   G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           ++D+A  L   + K   +P++ T++++I G C+  M++ A+ LF++M+ +G  P++  +N
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            L+  LCK   LE+A  LF +M             +  N   D  S   M++    AG I
Sbjct: 367 TLMASLCKESSLEQARRLFQEM-------------KESNCEPDTISFNIMIDGTLKAGDI 413

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           H A ++L  + + G  PD  TY+S IN   K+G +  A   F  +   G+ PD+  Y +L
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSL 473

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I G    D  E+   +  QM   G      +  S++T+ C   +      L   +  + S
Sbjct: 474 IKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESS 533

Query: 598 GRD----DESMKSIEEFLQKGEVENA 619
           G      D+ +  I++F  K ++  A
Sbjct: 534 GGTSISCDKLLMKIQKFNPKLQISAA 559



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 177/584 (30%), Positives = 283/584 (48%), Gaps = 71/584 (12%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M ++N LP+IV+++ +INGL K  + E A+ +L EM      PN FTY I++ GLC+  R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +EA RL  +MK  G   D V Y+ L++GFC    +D   AL     + G  P +  YSC
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  +   + EA A    M E  I+PDV  Y  MI GL + G+ + A+ L   M E+G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P T  YN LI G C  G +  A  +   + ++       ++  LI G+C NG +D+A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 399 KLFNKMEKAGCF--PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           KLF+ + + G +  P V  FN +I GLCK G L+KA  ++  M E G    LF       
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLF------- 293

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +   ++ +Y  +G+I KA ++  ++ + G +P   TY+ +I+GFCK+  +N A
Sbjct: 294 -------TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             LF  +++ GL P    Y TL+  L +    E A R+F +M ++ C P           
Sbjct: 347 KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPD---------- 396

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ- 634
                  +++F++                  I+  L+ G++ +A +        LND Q 
Sbjct: 397 -------TISFNIM-----------------IDGTLKAGDIHSAKE-------LLNDMQQ 425

Query: 635 --LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYL 686
             L P    Y+ ++  L + GQ++EA   F  ++   + +TP + V   LI G      +
Sbjct: 426 MGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMI--ASGITPDNHVYDSLIKGFGLNDEI 483

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           +  +++       G IL   + N +L  L  S ++  +H   LL
Sbjct: 484 EEVINLLRQMADMGVILDLEITNSILTFLCNSAEH--LHVMELL 525



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 184/405 (45%), Gaps = 49/405 (12%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M+   I+PD   YN +I G C    L++A  L VE+      PN+ T+ IL+ G+C+ G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V++A +L  +M++ G    V +++ LI G C  G L++   LF +M E G +P + +   
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV--- 117

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                         ++  +C  GL  +A  +L  + E G  PD+ TY  +I G CK G  
Sbjct: 118 -----------YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRA 166

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             AL LF  +  KG  P +VTY  LINGL +     DAF+IF  M + G       Y +L
Sbjct: 167 RKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTL 226

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C                   +G+ DE+MK     L+ G         +E D     
Sbjct: 227 IMGLCN------------------NGKLDEAMKLFSSLLEDGNY-------VEPD----- 256

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  +   + GLC++G++ +A+ I+  ++E  +     +C  LI    K G +D AM++
Sbjct: 257 --VITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           +    K G +  P    Y +    F K +    A  L  RMK  G
Sbjct: 315 WKRVHKLGLV--PSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISG 357



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 149/313 (47%), Gaps = 6/313 (1%)

Query: 47  GFRFF-IWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSGNVSVVSDV--FF 102
            F+ F     K KRL   + N+ +  M L  NG  D   +    L      V  DV  F 
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLI--MGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFN 261

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            +I G  K G  +KA+E +  M E     +++  + ++    +  +   A+ ++  + KL
Sbjct: 262 TVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKL 321

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
             +P+  T+S++I+G  K      A  +   M   G+ P  F Y  +++ LC+ +  ++A
Sbjct: 322 GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQA 381

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RLF +MK+S C PD +++N +++G  K   +  A  LL   ++ G  P   +YS  I+ 
Sbjct: 382 RRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINR 441

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  + +EA   +  M    I PD  +Y  +I+G     ++++ + LL  M + G++ D
Sbjct: 442 LSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILD 501

Query: 343 TYCYNALIKGFCD 355
               N+++   C+
Sbjct: 502 LEITNSILTFLCN 514


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 169/632 (26%), Positives = 305/632 (48%), Gaps = 21/632 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I    K   FD   + L E+R     + +  + VLI+G  + G  E+A      M++
Sbjct: 248 STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 307

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           +   PD + Y A++N   + +    A A+  EM      PN+V ++ LI+G  + G  + 
Sbjct: 308 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 367

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A KM+ EM   G+ PNK TY  ++ GLC++ + D A  L  +M      PD + YN ++ 
Sbjct: 368 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 427

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +     +A  LL   E  G  P + +YS +I GL ++   ++A     +M  + ++P
Sbjct: 428 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 487

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  +Y  +I G    G V  A ++   M +  ++PD YCYN+LI G   +G ++++    
Sbjct: 488 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 547

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +R  LPN  T++ LI G  +NG ++ A++L  +M   G  P+  ++  L++   K+
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 607

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQG---GNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            ++EK +  F  M           L QG    NR++       ++    ++G +  A+++
Sbjct: 608 DDIEKVSSTFKSM-----------LDQGVMLDNRIYG-----ILIHNLSSSGNMEAAFRV 651

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L  + ++G++PD+  Y+SLI+G CK  +   A  +  E+  KG+ P+ V Y  LI+GL +
Sbjct: 652 LSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 711

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
                 A  +F  +   G  P+   Y SL+  SC+    S AF L+ + L      D   
Sbjct: 712 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 771

Query: 604 MKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
              +       G++E A+  + EM F      ++ +   + G C+ G+++E L +  V++
Sbjct: 772 YSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIM 830

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
               +    +   +I GL + G L     +F+
Sbjct: 831 GRGLVPNALTIENIISGLSEAGKLSEVHTIFV 862



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 271/582 (46%), Gaps = 61/582 (10%)

Query: 123 KMKEF----DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           K++EF       PDVY Y+ ++    + + F  A  V  EM +  C  N VT+++LI GL
Sbjct: 230 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 289

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            +SG  E A     +M   G++P+ FTY  +I+GLC+  R++EA  L  +M  +   P+ 
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 349

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y  L++GF +    DEA  +++     G  P   +Y  L+ GL +  + D A    ++
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   PD + Y ++I G       KDA +LLS+M   GI P+ Y Y+ +I G C  G 
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            ++A  L  E+  +   PN   +  LI G CR G V  A ++F+KM K    P +  +N+
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 529

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LI GL K G +E++   F +M E G  P  F              +   ++  Y   G +
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGLLPNEF--------------TYSGLIHGYLKNGDL 575

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A +++ ++ ++G  P+ + Y  L+  + K  +I      FK +  +G+  D+  YG L
Sbjct: 576 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 635

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+ L      E AFR+   + +NG  P   VY SL++  C+      AF +         
Sbjct: 636 IHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI--------- 686

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                                    L EM  K  D  +  Y   + GLC+ G +  A N+
Sbjct: 687 -------------------------LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 658 FSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYT 696
           F+ ++  K +V  P+CV    LI G CK G  D++   +LY 
Sbjct: 722 FNSIL-AKGLV--PNCVTYTSLIDGSCKVG--DISNAFYLYN 758



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/587 (28%), Positives = 283/587 (48%), Gaps = 28/587 (4%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I   + L+  L ++    +  K+ + M   GI P+ +TY+ +I   C++   D A ++
Sbjct: 207 PSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV 266

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
            ++M++ GC  + V YN L+ G C+   V+EA    +  E  G VP   +Y  LI+GL +
Sbjct: 267 LVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 326

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           ++R +EA A   +M   +++P+VV+Y  +I G    G   +A K++ +M   G+ P+   
Sbjct: 327 SRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKIT 386

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ L++G C +G +D+A  L  ++ +    P+T T+ ++I G  R+    DA +L ++ME
Sbjct: 387 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
            AG  P+V  ++ +I GLC++GE EKA+ L  +M   G  P  F+               
Sbjct: 447 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV--------------Y 492

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  YC  G +  A +I  ++ +   LPD+  YNSLI G  KVG +  + K F ++Q 
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +GL P+  TY  LI+G  +    E A ++  +M   G  P+  +Y  L+    +      
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--LEMDFKLNDFQLAPYTIW 641
             S +   L      D+      I      G +E A + L  +E +  + D  +  Y+  
Sbjct: 613 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV--YSSL 670

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLK 698
           + GLC+    ++A   F +L E       P+ V    LI GLCK G +  A +VF   L 
Sbjct: 671 ISGLCKTADREKA---FGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA 727

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G +  P    Y        K     +A++L   M + G   DA +Y
Sbjct: 728 KGLV--PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/654 (24%), Positives = 294/654 (44%), Gaps = 67/654 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I   ++    D  ++ + E+ +  V      +  L+ G  K+G  ++A     +M    
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +PD   YN ++   FR      A  +  EM      PN+ T+S++I+GL +SG+ E A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L+EMT +G+ PN F Y  +ISG C+      A  +F KM      PD   YN+L+ G 
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+ RV+E+       ++ G +P   +YS LI G  +    + A    ++M +  ++P+ 
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594

Query: 309 VLY-----------------------------------GVMIRGLSEAGKVKDAMKLLSD 333
           V+Y                                   G++I  LS +G ++ A ++LS 
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + + G VPD + Y++LI G C     ++A  +  E+ K+   PN   +  LI G+C++G 
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           +  A+ +FN +   G  P+   + +LIDG CK G++  A  L+ +M   G  P  F+   
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV--- 771

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                         +     +AG + +A  ++ ++   G+   I ++N+L++GFCK G +
Sbjct: 772 -----------YSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKM 819

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              LKL   +  +GL P+++T   +I+GL    +  +   IF ++ Q             
Sbjct: 820 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK------------ 867

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
            T     R FS   SL++  +       D     I +  ++G ++ A+     +  K   
Sbjct: 868 -TSESAARHFS---SLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 923

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
              + Y   +  LC+ G++ EALN+   + +     +   C+ L+  L   GY+
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYI 977



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 167/423 (39%), Gaps = 87/423 (20%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K GD E A +   +M +   +P+  IY  +L   F+        + +  M+   
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            + +   + +LI+ LS SG  E A ++L  + + G +P+   Y+ +ISGLC+    ++A+
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  +M   G  P+ V YNAL++G CK   +  A  +  S    G VP   +Y+ LIDG 
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG--------------------- 322
            +      A+  Y +M    I PD  +Y V+  G S AG                     
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 804

Query: 323 -------------KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                        K+++ +KLL  +  RG+VP+      +I G  + G L +  ++ VE+
Sbjct: 805 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 864

Query: 370 WKRDSLPNTHTFTILICGM----------------------------------------- 388
            ++ S      F+ L   M                                         
Sbjct: 865 QQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPM 924

Query: 389 ------------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
                       CR G + +A  L  +M+K G  PS      L+  L  +G +++ N + 
Sbjct: 925 GCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVL 984

Query: 437 YKM 439
             M
Sbjct: 985 DNM 987



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 177/410 (43%), Gaps = 19/410 (4%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           ++F    +R  L +  + S +I   LK    +   Q +  +    +     ++  L+  Y
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K  D EK   +F  M +     D  IY  +++          A  V   + K   +P++
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +S LI+GL K+   E A  +LDEM+++G+ PN   Y  +I GLC+      A  +F  
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+ V Y +L++G CK+  +  A  L       G  P    YS L  G   A  
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A     +MF  +    +  +  ++ G  + GK+++ +KLL  +  RG+VP+      
Sbjct: 785 LEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM------------------CR 390
           +I G  + G L +  ++ VE+ ++ S      F+ L   M                  C+
Sbjct: 844 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 903

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            G +D A  L + +           + A++D LC+ G+L +A  L  +M+
Sbjct: 904 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 139/341 (40%), Gaps = 25/341 (7%)

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR-----LSQGGNRVHDKASL 464
           P+   F  L   LC       AN L  KM     +P + L      LS  G+R    A L
Sbjct: 120 PAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHR--SPAVL 177

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +V+ Y  +G +  A ++++ + + G  P I   N+L+    +   +    K+ + +  
Sbjct: 178 DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVG 237

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+ PD  TY TLI    +V   + A ++  +M + GC  +   Y  L+   CR      
Sbjct: 238 AGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEE 297

Query: 585 AFSLWLQYLRDISG----RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--- 637
           AF     + +D+       D  +  ++   L K    N  + LL+   +++  +L P   
Sbjct: 298 AFG----FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD---EMSCAELKPNVV 350

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y   + G  ++G   EA  +   +V         +   L+ GLCK G +D A  +    
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           +++    RP    Y L      + + K  A+ LL  M++ G
Sbjct: 411 VRDSH--RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 180/633 (28%), Positives = 295/633 (46%), Gaps = 84/633 (13%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            G+ K +  Q  V+ YN  L+   +     LA   + +M +    P+  T+S+++ GL K
Sbjct: 28  LGRQKGY--QHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCK 85

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFV 239
           +G+ + A ++L ++ + G+  N  TY++VI G C+ +R D+A  +F  M   G C PD V
Sbjct: 86  AGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVV 145

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            +N+LL G C   R+ EA  L     K G  P + SYS L+DGL +A R DEA   + +M
Sbjct: 146 TFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM 205

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            E+   PD+V Y   + GL +A +V +A      M  +G   D   ++ +I   C  G  
Sbjct: 206 VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHA 265

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           ++A++  +E                   +CR+GM+D+A K F +M      PS  +FN L
Sbjct: 266 EEAQNQMIE------------------HLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307

Query: 420 IDGLCKAGELEKANLLFYKMEIGKN----PTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           I  +CK+  L    LLF +M+  K     P L               +   MV+  C A 
Sbjct: 308 IHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL--------------ETYNIMVDNLCKAK 353

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A +++ ++A  G  PD++TY++L++G CK+G ++ A  L +E+  +G+ PDS T  
Sbjct: 354 QLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDA 413

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +++N L +  + + A      M   G TP    Y +L+   C+                 
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK----------------- 456

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
            +GR DE++     FL K         +              YTI +  LC+ GQ   A 
Sbjct: 457 -AGRIDEAIT----FLAKMVAAKCTPDVFS------------YTIIITALCRSGQAAGAH 499

Query: 656 NIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTL-KNGFILRPRVCNYLL 712
            IF  +V  K  V P + +   L+ GL + G  DLA+++   +L K  F++   V + L 
Sbjct: 500 AIFQEMV--KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLC 557

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++       K   A  ++ RM   G+  DA  Y
Sbjct: 558 KA------GKAEDACEVVERMADAGFPADAFTY 584



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 257/560 (45%), Gaps = 39/560 (6%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV 96
            + K    Q+ +  F    +R       + S V+  L K    D   + L +LR   V +
Sbjct: 47  ALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKL 106

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAV 155
               + V+I G  K    + ALE F  M     C PDV  +N++L      +    A  +
Sbjct: 107 NVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVL 166

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +  M K  C PN++++S L++GL K+G+ + A ++ +EM ++  +P+   YT  ++GLC+
Sbjct: 167 FEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCK 226

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAY-----------------NALLNGFCKLRRVDEAL 258
            NR  EA     KM   G   D VA+                 N ++   C+   +DEA 
Sbjct: 227 ANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEAC 286

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK---IEPDVVLYGVMI 315
                       P    ++ LI  + ++KR  +    +++M   K     P++  Y +M+
Sbjct: 287 KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             L +A ++ +A +L+++M   G+ PD   Y+AL+ G C LG LD+A  L  E+ K    
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF 406

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P++ T   ++  + + G VD A      M+  G  P +  +N L+DGLCKAG +++A   
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITF 466

Query: 436 FYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             KM   K  P +F              S   ++   C +G    A+ I  ++ + G LP
Sbjct: 467 LAKMVAAKCTPDVF--------------SYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D + Y+SL++G  + G  + AL+L K    K   PD V +  +++GL +  + EDA  + 
Sbjct: 513 DTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVV 569

Query: 555 GQMPQNGCTPSPAVYKSLMT 574
            +M   G       Y S+++
Sbjct: 570 ERMADAGFPADAFTYISVVS 589



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 202/441 (45%), Gaps = 36/441 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ G  K G  ++A   + +M E  C PD+  Y + +    +      A     +MV
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVA-----------------IKMLDEMTQRGILPNK 203
                 + V FS +I  L K G  E A                  K  +EM  R   P+ 
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSG---CSPDFVAYNALLNGFCKLRRVDEALAL 260
             +  +I  +C+  R  +   LF +MK      C P+   YN +++  CK +++DEA  L
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +      G  P + +YS L+DGL +  + D A     +M +E + PD      ++  LS+
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AGKV  A+  L  M+ RG  PD   YN L+ G C  G +D+A +   ++      P+  +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +TI+I  +CR+G    A  +F +M K G  P   ++++L+DGL + G LE   L   K  
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LEDLALELLKTS 540

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           + K P   +               + +++  C AG    A +++ ++A++G   D  TY 
Sbjct: 541 LCK-PDFVMH--------------KMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYI 585

Query: 501 SLINGFCKVGNINGALKLFKE 521
           S+++G  K+G ++ A +L  +
Sbjct: 586 SVVSGLRKLGKVDKARQLVDD 606



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 234/509 (45%), Gaps = 14/509 (2%)

Query: 206 YTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           YT+V   L  + +     RLF  + +  G       YN  L+   K      A    +  
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           ++ G+ P   +YS ++ GL +A   D+A     ++ E  ++ +V+ Y V+I G  +A +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 325 KDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            DA+++   M   G  VPD   +N+L+KG C    + +A  L   + K    PN  +++ 
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+C+ G +D+A +L+ +M +  C P +  + + + GLCKA  + +A     KM    
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 444 NPTLFLRLSQG----GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +    +  S        + H + +   M+E  C +G++ +A K   ++    + P    +
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-----PDSVTYGTLINGLQRVDREEDAFRIF 554
           N+LI+  CK   +   + LF+  ++K ++     P+  TY  +++ L +  + ++A  + 
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQ--RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK- 613
            +M   G +P    Y +L+   C+  K   A  L  +  ++    D  +  SI   L K 
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G+V+ A+  L  M  + +   L  Y   L GLC+ G++ EA+   + +V  K      S 
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +I  LC+ G    A  +F   +K G +
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVL 511



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 104/197 (52%), Gaps = 3/197 (1%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           +++++++ L K    D     L+ +++   +     +  L+ G  K G  ++A+    KM
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               C PDV+ Y  ++    R      A A++ EMVK   LP+ V +  L++GL+++G  
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++A+++L     +   P+   + +V+ GLC+  +A++A  +  +M D+G   D   Y ++
Sbjct: 531 DLALELLKTSLCK---PDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISV 587

Query: 245 LNGFCKLRRVDEALALL 261
           ++G  KL +VD+A  L+
Sbjct: 588 VSGLRKLGKVDKARQLV 604


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 241/512 (47%), Gaps = 15/512 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + S ++    K +G+      LDE+R+         + VLI+     GD ++AL   
Sbjct: 196 SVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 255

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +    C+PD   Y  VL      + +     ++ EM    C P+ VTF+ ++  L + 
Sbjct: 256 SDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQ 315

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  + AIK++D M++ G +P+  TY+ ++ GLC + R D+A  L  ++K  GC PD +AY
Sbjct: 316 GLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 375

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C + + + A  L+         P   +++ +I  L +    D A     +M E
Sbjct: 376 TTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSE 435

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               PD+V Y  +I GL     + DAM+LLS+++  G  PD   +N L+KG C +   + 
Sbjct: 436 NGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWED 495

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L V +   D  P+  TF  +I  +C+ G++  A +    M + GC P+   +N ++D
Sbjct: 496 AEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVD 555

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L KAG+ ++A  L   M                N   D  +  T++     AG + +A 
Sbjct: 556 ALLKAGKTQEALKLLSGMT---------------NGTPDLITYNTVISNITKAGKMEEAL 600

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  +  +G  PD ITY SL  G C+    + A+++   LQ  GL PD+  Y  ++ G 
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +  R + A   F  M  +GC P  + Y  L+
Sbjct: 661 CQNWRTDIAIDCFAHMVSSGCMPDESTYIILL 692



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/599 (25%), Positives = 264/599 (44%), Gaps = 57/599 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI      G    AL  F  M    C P V  Y+ +L+   +   +  A+ +  EM
Sbjct: 164 TFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM 223

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++LIN +   G  + A+ +L ++   G  P+  TYT V+  LC   R 
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW 283

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            E   LF +M  + C+PD V +N ++   C+   VD A+ ++    + G +P + +YS +
Sbjct: 284 KEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI 343

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL    R D+A     ++     +PD + Y  +++GL    + + A +L+++M     
Sbjct: 344 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDC 403

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   +N +I   C  GL+D+A  +  ++ +    P+  T+  +I G+C    +DDA +
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L + ++  GC P +  FN L+ GLC     E A  L   M     P              
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP------------- 510

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++   C  GL+ +A + L  +AE+G +P+  TYN +++   K G    ALKL 
Sbjct: 511 DATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL 570

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
               +    PD +TY T+I+ + +  + E+A  +   M  NG +P    Y+SL    CR 
Sbjct: 571 S--GMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICR- 627

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP-- 637
                                                E+     + M  +L D  L+P  
Sbjct: 628 -------------------------------------EDGTDRAIRMLCRLQDMGLSPDA 650

Query: 638 --YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
             Y   L+G CQ+ +   A++ F+ +V    +    + + L+  L     LD A  + +
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLV 709



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/581 (27%), Positives = 277/581 (47%), Gaps = 58/581 (9%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
            +VT++ ++NG  ++G+ E A +++  M      P+ FT+  +I  LC   R  +A  +F
Sbjct: 129 TVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVF 185

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   GCSP  V Y+ LL+  CK     +A+ LL      G  P + +Y+ LI+ +   
Sbjct: 186 DDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNE 245

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              DEA      +     +PD V Y  +++ L  + + K+  +L ++M      PD   +
Sbjct: 246 GDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTF 305

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N ++   C  GL+D+A  +   + +   +P+  T++ ++ G+C  G VDDA +L ++++ 
Sbjct: 306 NTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKS 365

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            GC P    +  ++ GLC   + E A  L  +M     P              D+ +  T
Sbjct: 366 YGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP-------------DEVTFNT 412

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  GL+ +A K++ Q++E+G  PDI+TYNS+I+G C    I+ A++L   LQ  G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            +PD VT+ TL+ GL  VDR EDA ++   M  + C P    + +++T  C++       
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQK------- 525

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L LQ +        E++K + E    G + N                 + Y I +  L 
Sbjct: 526 GLLLQAI--------ETLKIMAE---NGCIPNQ----------------STYNIVVDALL 558

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G+ +EAL + S +      +   + V  I  + K G ++ A+D+    + NG  L P 
Sbjct: 559 KAGKTQEALKLLSGMTNGTPDLITYNTV--ISNITKAGKMEEALDLLRVMVSNG--LSPD 614

Query: 707 VCNYLLRSLLFS--KDNKKVHAYHLLCRMKSVGYDLDACLY 745
              Y  RSL +   +++    A  +LCR++ +G   DA  Y
Sbjct: 615 TITY--RSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFY 653



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 177/373 (47%), Gaps = 2/373 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S+++  L      D   + L  L+S      +  +  ++ G   +   E A E   +M  
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC PD   +N V+    +K L   A+ V  +M +  C P+IVT++ +I+GL      + 
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++L  +   G  P+  T+  ++ GLC ++R ++A +L + M  S C PD   +N ++ 
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+   + +A+  L+   ++G +P   +Y+ ++D L +A +  EA      M      P
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--P 578

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++ Y  +I  +++AGK+++A+ LL  M   G+ PDT  Y +L  G C     D+A  + 
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P+   +  ++ G C+N   D A   F  M  +GC P    +  L++ L   
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698

Query: 427 GELEKANLLFYKM 439
             L++A  L   +
Sbjct: 699 CLLDEAKQLLVNL 711



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 2/274 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L      D   + L  L+S         F  L+ G   V   E A +    M  
Sbjct: 446 NSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH 505

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC PD   +N V+    +K L L A+     M +  C+PN  T++++++ L K+GKT+ 
Sbjct: 506 SDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE 565

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+L  MT     P+  TY  VIS + +  + +EA  L   M  +G SPD + Y +L  
Sbjct: 566 ALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAY 623

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+    D A+ +L   +  G  P    Y+ ++ G  +  R D A   +  M      P
Sbjct: 624 GICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMP 683

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   Y +++  L+    + +A +LL ++   G++
Sbjct: 684 DESTYIILLEALAYECLLDEAKQLLVNLCSLGVL 717


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 183/688 (26%), Positives = 328/688 (47%), Gaps = 43/688 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I   ++    D   +  D + S  + +    + VLI G  K G  EKA E    M  
Sbjct: 49  SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 108

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C+P+   +  ++    R+     AL +  EM K N +P+ V++  +INGL       +
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 168

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+L++MT  G+ PN   Y+ +I G     R +EA RL   M  SG +PD   YNA+++
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
              K  +++EA   L   +  G  P   ++   I G  +  +  EA  ++ +M +  + P
Sbjct: 229 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 288

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  LY V+I G  +AG + +A+ +   +   G++PD    +A I G    G + +A  + 
Sbjct: 289 NNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVF 348

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++  +P+  T++ LI G C+ G V+ A +L ++M   G  P++ ++NAL+DGLCK+
Sbjct: 349 SELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKS 408

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++++A  LF  M E G  P              D  +  TM++ YC +  + +A+ +  
Sbjct: 409 GDIQRARKLFDGMPEKGLEP--------------DSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  P    YN+L++G CK G++  A+ LF+E+  KG    ++++ TLI+G  +  
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSC 513

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + ++A ++F +M      P    Y +++ W C+  K   A +L  + +++ +   D    
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA-NLLFKEMQERNLIVDTVFA 572

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
             E+ + KG   + +                 Y + +   C++  + EA  +   +V  K
Sbjct: 573 LFEKMVAKGVKPDEVT----------------YGLVIYAHCKEDNLVEAFKLRDEVVG-K 615

Query: 666 AIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
            ++T  +    LI  LCKR  L  A  +     + G       C+ L+RS  F +  K  
Sbjct: 616 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS--FHEAGKMD 673

Query: 725 HAYHLLCRMKSVGYDLDACLYPKTKSLL 752
            A  +   +KS+G      L P T +L+
Sbjct: 674 EATRVFEGVKSLG------LVPDTTTLI 695



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 273/572 (47%), Gaps = 32/572 (5%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M E    P+ Y Y  +     R +    A   + EM K    P+    S LI+G  + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            +  +++ D M   GI  N  TY ++I GLC+  + ++A  +   M   GC P+   +  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ G+C+   +  AL LL   EK   VP   SY  +I+GL   K    A     KM    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++P+VV+Y  +I G +  G++++A +LL  M   G+ PD +CYNA+I      G +++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +  +EI  R   P+  TF   I G  + G + +A K F++M   G  P+  ++  LI+G 
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 424 CKAGELEKANLLFYKME-IGKNP----------------------TLFLRLSQGGNRVHD 460
            KAG L +A  +F  +  +G  P                       +F  L + G  V D
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG-LVPD 359

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++  +C  G + KA+++  ++   G  P+I  YN+L++G CK G+I  A KLF 
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +  KGL PDSVTY T+I+G  + +   +AF +F +MP  G  P   VY +L+   C+  
Sbjct: 420 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 479

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--- 637
               A +L+ + L+            I+ + +  +++ A Q   EM  K    Q+ P   
Sbjct: 480 DMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAK----QIMPDHV 535

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            YT  +   C+ G+++EA  +F  + E   IV
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 567



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 253/511 (49%), Gaps = 18/511 (3%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M ++G++PN +TYTI+ +GLC+  R +EA   F +M+ +G  PD+ A +AL++GF +   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +DE L +       G    L +Y+ LI GL +  + ++A    + M     +P+   + +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G      +  A++LL +M +R +VP    Y A+I G C    L  A  L  ++    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN   ++ LI G    G +++A++L + M  +G  P +  +NA+I  L KAG++E+A+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
              Y +EI           QG     D  +    +  Y   G + +A K   ++ + G +
Sbjct: 241 T--YLLEI-----------QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+   Y  LING  K GN+  AL +F+ L   G+ PD  T    I+GL +  R ++A ++
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQ 612
           F ++ + G  P    Y SL++  C++ +   AF L  +  L+ I+         ++   +
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G+++ A +    M  K  +     Y+  + G C+   V EA ++F  +      V P S
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP--SKGVQPHS 465

Query: 673 CV--KLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            V   L+HG CK G ++ AM++F   L+ GF
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 255/533 (47%), Gaps = 32/533 (6%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR  + S  S  A+I+ L       L  + L+++    +     V+  LI GY   G  E
Sbjct: 143 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 202

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A      M      PD++ YNA+++   +      A     E+      P+ VTF   I
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G SK+GK   A K  DEM   G++PN   YT++I+G  +     EA  +F  +   G  
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD    +A ++G  K  RV EAL +    ++ G VP + +YS LI G  +    ++A+  
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 382

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M  + I P++ +Y  ++ GL ++G ++ A KL   M E+G+ PD+  Y+ +I G+C 
Sbjct: 383 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 442

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A SL  E+  +   P++  +  L+ G C+ G ++ A  LF +M + G F +   
Sbjct: 443 SENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLS 501

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           FN LIDG CK+ ++++A+ LF +M I K              + D  +  T+++ +C AG
Sbjct: 502 FNTLIDGYCKSCKIQEASQLFQEM-IAKQI------------MPDHVTYTTVIDWHCKAG 548

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +  ++ E   + D +                    LF+++  KG++PD VTYG
Sbjct: 549 KMEEANLLFKEMQERNLIVDTV------------------FALFEKMVAKGVKPDEVTYG 590

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +I    + D   +AF++  ++   G      ++  L+T  C+R   + A  L
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKL 643



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 183/387 (47%), Gaps = 34/387 (8%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M E+G+VP+TY Y  +  G C    +++A+    E+ K    P+ +  + LI G  R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           +D+  ++ + M   G   ++  +N LI GLCK G++EKA  +   M  +G  P       
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP------- 113

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  +  +   ++E YC    + +A ++L ++ +   +P  ++Y ++ING C   ++
Sbjct: 114 -------NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDL 166

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A KL +++   GL+P+ V Y TLI G     R E+A R+   M  +G  P    Y ++
Sbjct: 167 SLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAI 226

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           ++   +  K   A +    YL +I GR    D  +  + I  + + G++  A +   EM 
Sbjct: 227 ISCLSKAGKMEEAST----YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM- 281

Query: 628 FKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
               D  L P    YT+ + G  + G + EAL+IF  L     +    +C   IHGL K 
Sbjct: 282 ---LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKN 338

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNY 710
           G +  A+ VF    + G +  P V  Y
Sbjct: 339 GRVQEALKVFSELKEKGLV--PDVFTY 363



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/385 (21%), Positives = 171/385 (44%), Gaps = 19/385 (4%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           ++K    Q   + F    ++  +    + S++IS   K    +  ++  DE+    ++  
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
             ++  L+ G  K GD ++A + F  M E   +PD   Y+ +++   + +    A ++++
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFH 454

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM      P+   ++ L++G  K G  E A+ +  EM Q+G      ++  +I G C+  
Sbjct: 455 EMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSC 513

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA +LF +M      PD V Y  +++  CK  +++EA  L +  ++   +       
Sbjct: 514 KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI------- 566

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
                       D  +A + KM  + ++PD V YG++I    +   + +A KL  ++  +
Sbjct: 567 -----------VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGK 615

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G++     ++ LI   C    L +A  L  E+ +    P+    + L+      G +D+A
Sbjct: 616 GMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEA 675

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDG 422
            ++F  ++  G  P       L++G
Sbjct: 676 TRVFEGVKSLGLVPDTTTLIDLVNG 700



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 22/327 (6%)

Query: 60  LRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           L+  A N    +A++  L K        +  D +    +   S  +  +I GY K  +  
Sbjct: 388 LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 447

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A   F +M     QP  ++YNA+++   ++     A+ ++ EM++       ++F+ LI
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLI 506

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA------------- 222
           +G  KS K + A ++  EM  + I+P+  TYT VI   C+  + +EA             
Sbjct: 507 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 566

Query: 223 ----YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
               + LF KM   G  PD V Y  ++   CK   + EA  L       G + +   +  
Sbjct: 567 VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 626

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI  L + +   EA     +M E  ++P +     ++R   EAGK+ +A ++   ++  G
Sbjct: 627 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 686

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSL 365
           +VPDT     L+ G  +    + AR+L
Sbjct: 687 LVPDTTTLIDLVNGNLNDTDSEDARNL 713


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 155/583 (26%), Positives = 287/583 (49%), Gaps = 28/583 (4%)

Query: 11  ILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVI 70
           +L+T+ P++   +  L  L ++ V + +    N  +   FF   A      SF       
Sbjct: 21  VLNTINPLQNE-QKDLNLLKESEVLNKLKNEPNILLALHFFKSIANS---NSFKHTPLTY 76

Query: 71  SMLLKPNGF----DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++K  G+    D     L  ++   +S   D+F ++I+ Y + G  E+AL++F ++ E
Sbjct: 77  TTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGE 136

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F C+P V IYN VL+    +  F +   +Y  M +     N+ T+++L+  L K+ + + 
Sbjct: 137 FGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDA 196

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV-AYNALL 245
           A K+L EM+ +G +P+  +YT V+S +C++ + +EA  L +++K       FV  YNAL+
Sbjct: 197 ARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK------SFVPVYNALI 250

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NGFC+  +++E   L      +G  P + +YS +I+ L      + A A   KMF     
Sbjct: 251 NGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCS 310

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+V  +  +++G    G++ +A+ L + M + G  P+T  YN LI G C  G + +A S+
Sbjct: 311 PNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSV 370

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             ++ +    PN  T++ LI G  + G +  A +++NKM   GC P+V ++  ++D LC+
Sbjct: 371 SQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCR 430

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                 A  L   M  G  P              +  +  T ++  C +G    A K+L 
Sbjct: 431 NSMFNHALHLIENMANGNCPP-------------NTITFNTFIKGLCCSGKTEWAMKVLN 477

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           Q+ + G  P++ TYN +++G         AL++  E++   ++ + VTY T+++G     
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             + A +I G++   G  P    Y +++   C++ +   A  L
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQL 580



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 220/477 (46%), Gaps = 60/477 (12%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  ++S   ++G  E+A E   ++K F     V +YNA++N   R+        ++ EM 
Sbjct: 216 YTTVVSSMCRLGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMA 270

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+++T+S +IN LS+ G  E+A+ +L +M  RG  PN  T+T ++ G     R  
Sbjct: 271 VEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLC 330

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L+ +M   G  P+ VAYN L++G C   ++ EA+++ +  E++G  P   +YS LI
Sbjct: 331 EALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLI 390

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG  +A     A   + KM      P+VV+Y  M+  L        A+ L+ +M      
Sbjct: 391 DGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP 450

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+T  +N  IKG C                               C    +G  + A K+
Sbjct: 451 PNTITFNTFIKGLC-------------------------------C----SGKTEWAMKV 475

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIGKNPTLFLRLSQGGNR 457
            N+M + GC P+V  +N ++DGL  A    +A  +     +MEI  N   +         
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTY--------- 526

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                   T++  +C AG+   A +I  +L   G  PD ITYN++I  +CK G +  A++
Sbjct: 527 -------NTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQ 579

Query: 518 LFKELQLKGL-RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           L   L  KG   PD  TY +L+ G+      ++A     +M   G  P+ A + +L+
Sbjct: 580 LVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALV 636



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 193/414 (46%), Gaps = 13/414 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI+G+ +    E+  E F +M      PDV  Y+ V+N         +ALAV  +M
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C PN+ TF+ L+ G    G+   A+ + + M Q G  PN   Y  +I GLC   + 
Sbjct: 305 FLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKM 364

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +  KM+ +G  P+   Y+ L++GF K   +  A  +      +G +P +  Y+C+
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCM 424

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +D L R   ++ A      M      P+ + +   I+GL  +GK + AMK+L+ MR+ G 
Sbjct: 425 VDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGC 484

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN ++ G  +     +A  +  EI + +   N  T+  ++ G C  GM   A +
Sbjct: 485 APNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQ 544

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +  K+   G  P    +N +I   CK GE++ A              L  RL++ G    
Sbjct: 545 IAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTA------------IQLVDRLTKKGEGYP 592

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNI 512
           D  +  +++   C    + +A   L ++   G  P+  T+N+L+ G F K+G++
Sbjct: 593 DVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHL 646



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 154/382 (40%), Gaps = 65/382 (17%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N   F I+I    R G+ + A K F ++ + GC PSV ++N ++D L    + +  N ++
Sbjct: 107 NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIY 166

Query: 437 YKME-----------------------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             M+                       +     L   +S  G  + D  S  T+V   C 
Sbjct: 167 NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG-CIPDAVSYTTVVSSMCR 225

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + +A ++ M++        +  YN+LINGFC+   +    +LF E+ ++G+ PD +T
Sbjct: 226 LGKVEEARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVIT 280

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+IN L  +   E A  +  +M   GC+P+   + SLM       +   A  LW    
Sbjct: 281 YSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW---- 336

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                            +Q+G   N +                 Y   + GLC  G++ E
Sbjct: 337 --------------NRMIQEGSEPNTV----------------AYNTLIHGLCSYGKMVE 366

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A+++   +          +   LI G  K G L  A +++   + NG +  P V  Y   
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL--PNVVVYTCM 424

Query: 714 SLLFSKDNKKVHAYHLLCRMKS 735
             +  +++   HA HL+  M +
Sbjct: 425 VDVLCRNSMFNHALHLIENMAN 446



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 6/198 (3%)

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TY ++I       +I+G   L + ++L+G+  +   +  +IN  +R    E A + F +
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           + + GC PS  +Y  ++       KF +   ++    RD    +  +   + + L K + 
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 617 ENAIQGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            +A + LL EM +K        YT  +  +C+ G+V+EA  +    +  K+ V  P    
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELS---MRIKSFV--PVYNA 248

Query: 676 LIHGLCKRGYLDLAMDVF 693
           LI+G C+   ++   ++F
Sbjct: 249 LINGFCREHKMEEVFELF 266


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 180/633 (28%), Positives = 295/633 (46%), Gaps = 84/633 (13%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            G+ K +  Q  V+ YN  L+   +     LA   + +M +    P+  T+S+++ GL K
Sbjct: 28  LGRQKGY--QHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCK 85

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFV 239
           +G+ + A ++L ++ + G+  N  TY++VI G C+ +R D+A  +F  M    GC PD V
Sbjct: 86  AGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVV 145

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            +N+LL G C   R+ EA  L     K G  P + SYS L+DGL +A R DEA   + +M
Sbjct: 146 TFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEM 205

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            E+   PD+V Y   + GL +A +V +A      M  +G   D   ++ +I   C  G  
Sbjct: 206 VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHA 265

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           ++A++  +E                   +CR+GM+D+A K F +M      PS  +FN L
Sbjct: 266 EEAQNQMIE------------------HLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307

Query: 420 IDGLCKAGELEKANLLFYKMEIGKN----PTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           I  +CK+  L    LLF +M+  K     P L               +   MV+  C A 
Sbjct: 308 IHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL--------------ETYNIMVDNLCKAK 353

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A +++ ++A  G  PD++TY++L++G CK+G ++ A  L +E+  +G+ PDS T  
Sbjct: 354 QLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDA 413

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +++N L +  + + A      M   G TP    Y +L+   C+                 
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK----------------- 456

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
            +GR DE++     FL K         +              YTI +  LC+ GQ   A 
Sbjct: 457 -AGRIDEAIT----FLAKMVAAKCTPDVF------------SYTIIITALCRSGQAAGAH 499

Query: 656 NIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTL-KNGFILRPRVCNYLL 712
            IF  +V  K  V P + +   L+ GL + G  DLA+++   +L K  F++   V + L 
Sbjct: 500 AIFQEMV--KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLC 557

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++       K   A  ++ RM   G+  DA  Y
Sbjct: 558 KA------GKAEDACEVVERMADAGFPADAFTY 584



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 261/588 (44%), Gaps = 75/588 (12%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELR 90
           T V  V+          R F W  ++K  + S  + +  +  L K N   L ++   +++
Sbjct: 6   TVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQ 65

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
                     + +++ G  K G+ +KA E  G+++E   + +V  Y+ V++   +     
Sbjct: 66  RRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVD 125

Query: 151 LALAVYYEM-VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
            AL ++  M     C+P++VTF+ L+ GL    +   A  + + M + G  PN  +Y+ +
Sbjct: 126 DALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTL 185

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           + GLC+  R DEA RL+ +M +  C PD VAY + + G CK  RV EA    R     G 
Sbjct: 186 LDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGS 245

Query: 270 VPRLGSYSC-----------------LIDGLFRAKRYDEAYAWYRKMF------------ 300
                ++S                  +I+ L R+   DEA   + +M             
Sbjct: 246 KADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFN 305

Query: 301 -------EEKIEPDVVL-------------------YGVMIRGLSEAGKVKDAMKLLSDM 334
                  + K  PD VL                   Y +M+  L +A ++ +A +L+++M
Sbjct: 306 TLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEM 365

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G+ PD   Y+AL+ G C LG LD+A  L  E+ K    P++ T   ++  + + G V
Sbjct: 366 ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKV 425

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQ 453
           D A      M+  G  P +  +N L+DGLCKAG +++A     KM   K  P +F     
Sbjct: 426 DYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVF----- 480

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    S   ++   C +G    A+ I  ++ + G LPD + Y+SL++G  + G  +
Sbjct: 481 ---------SYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            AL+L K    K   PD V +  +++GL +  + EDA  +  +M   G
Sbjct: 532 LALELLKTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAG 576



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 250/571 (43%), Gaps = 68/571 (11%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV 96
            + K    Q+ +  F    +R       + S V+  L K    D   + L +LR   V +
Sbjct: 47  ALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKL 106

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAV 155
               + V+I G  K    + ALE F  M     C PDV  +N++L      +    A  +
Sbjct: 107 NVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVL 166

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +  M K  C PN++++S L++GL K+G+ + A ++ +EM ++  +P+   YT  ++GLC+
Sbjct: 167 FEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCK 226

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAY-----------------NALLNGFCKLRRVDEAL 258
            NR  EA     KM   G   D VA+                 N ++   C+   +DEA 
Sbjct: 227 ANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEAC 286

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK---IEPDVVLYGVMI 315
                       P    ++ LI  + ++KR  +    +++M   K     P++  Y +M+
Sbjct: 287 KTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMV 346

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             L +A ++ +A +L+++M   G+ PD   Y+AL+ G C LG LD+A  L  E+ K    
Sbjct: 347 DNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF 406

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P++ T   ++  + + G VD A      M+  G  P +  +N L+DGLCKAG +++A   
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITF 466

Query: 436 FYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             KM   K  P +F              S   ++   C +G    A+ I  ++ + G LP
Sbjct: 467 LAKMVAAKCTPDVF--------------SYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 495 DIITYNSL--------------------------------INGFCKVGNINGALKLFKEL 522
           D + Y+SL                                ++G CK G    A ++ + +
Sbjct: 513 DTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERM 572

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
              G   D+ TY  ++ GL+++ + + A ++
Sbjct: 573 ADAGFPADAFTYINVVRGLRKLGKVDKARQL 603



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 234/509 (45%), Gaps = 14/509 (2%)

Query: 206 YTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           YT+V   L  + +     RLF  + +  G       YN  L+   K      A    +  
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           ++ G+ P   +YS ++ GL +A   D+A     ++ E  ++ +V+ Y V+I G  +A +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 325 KDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            DA+++   M   G  VPD   +N+L+KG C    + +A  L   + K    PN  +++ 
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+C+ G +D+A +L+ +M +  C P +  + + + GLCKA  + +A     KM    
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244

Query: 444 NPTLFLRLSQG----GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +    +  S        + H + +   M+E  C +G++ +A K   ++    + P    +
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-----PDSVTYGTLINGLQRVDREEDAFRIF 554
           N+LI+  CK   +   + LF+  ++K ++     P+  TY  +++ L +  + ++A  + 
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQ--RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK- 613
            +M   G +P    Y +L+   C+  K   A  L  +  ++    D  +  SI   L K 
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G+V+ A+  L  M  + +   L  Y   L GLC+ G++ EA+   + +V  K      S 
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +I  LC+ G    A  +F   +K G +
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVL 511



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 136/269 (50%), Gaps = 5/269 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L K    D   + ++E+ +  +S     +  L+ G  K+G  ++A +   +M +  
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             PD +   ++LN   +      AL+    M      P++VT++ L++GL K+G+ + AI
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
             L +M      P+ F+YTI+I+ LC+  +A  A+ +F +M   G  PD V Y++LL+G 
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524

Query: 249 CKLRRVDEALALLR-SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            +    D AL LL+ S  K  FV     +  ++DGL +A + ++A     +M +     D
Sbjct: 525 ARNGLEDLALELLKTSLCKPDFV----MHKMVVDGLCKAGKAEDACEVVERMADAGFPAD 580

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
              Y  ++RGL + GKV  A +L+ D  E
Sbjct: 581 AFTYINVVRGLRKLGKVDKARQLVDDASE 609



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 102/197 (51%), Gaps = 3/197 (1%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           +++++++ L K    D     L+ +++   +     +  L+ G  K G  ++A+    KM
Sbjct: 411 TDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM 470

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               C PDV+ Y  ++    R      A A++ EMVK   LP+ V +  L++GL+++G  
Sbjct: 471 VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE 530

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++A+++L     +   P+   + +V+ GLC+  +A++A  +  +M D+G   D   Y  +
Sbjct: 531 DLALELLKTSLCK---PDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINV 587

Query: 245 LNGFCKLRRVDEALALL 261
           + G  KL +VD+A  L+
Sbjct: 588 VRGLRKLGKVDKARQLV 604


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 145/445 (32%), Positives = 240/445 (53%), Gaps = 15/445 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA +Y M+++N  P++V F   +  ++K  +    + + ++M   G+  N ++  I+I+
Sbjct: 76  ALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILIN 135

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC++N    A  +  KM   G  PD + +N L+NG C    + EA+ L     + G  P
Sbjct: 136 CLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQP 195

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + SYS +I+GL ++     A    RKM E+  +P++V Y  +I  L +   V DAM LL
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLL 255

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M +RGI PD   Y+ ++ GFC LG L++A  L  E+  R+ +PNT TFTIL+ G+C+ 
Sbjct: 256 SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKE 315

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLR 450
           GMV +A+ +F  M K G  P+   +NAL+DG C   ++++A  +L   ++ G  P     
Sbjct: 316 GMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPV---- 371

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                  VH   S   ++  YC    + +A  +L++++E    PD +TY++L+ G C+VG
Sbjct: 372 -------VH---SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               AL LFKE+   GL PD +TY TL++GL +    ++A ++   M ++   P   +Y 
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRD 595
            L+       K  +A  L+ +   D
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFAD 506



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 257/514 (50%), Gaps = 16/514 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M   + +P V  +   L    +K+ +   +++  +M       N+ + ++L
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +      AI +L +M + GI P+  T+  +I+G C      EA  LF +M   G 
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD ++Y+ ++NG CK      AL LLR  E+ G  P L +Y+ +ID L +    ++A  
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M +  I PDVV Y  ++ G    G + +A  L ++M  R ++P+T  +  L+ G C
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++ +AR +   + K+ + PN +T+  L+ G C N  +D+AQK+ + M   GC P V 
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI+G CK   L++A  L  +M E    P              D  +  T+++  C 
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTP--------------DTVTYSTLMQGLCQ 419

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G   +A  +  ++  SG LPD++TY++L++G CK G+++ ALKL K +Q   + PD V 
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI G+    + E A  +F ++  +G  P+   Y  ++    +      A+ L+ +  
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKME 539

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            D    +  S    I+ FLQ  +   AI+ + EM
Sbjct: 540 DDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 265/536 (49%), Gaps = 34/536 (6%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           RF    AK+K+       S V+S+    N  DL+  T       NV  ++    +LI+  
Sbjct: 97  RFLGSIAKKKQY------STVVSLC---NQMDLFGVT------HNVYSLN----ILINCL 137

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            ++     A+   GKM +   QPD   +N ++N    +     A+ ++ EMV+    P++
Sbjct: 138 CRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDV 197

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +++S +INGL KSG T +A+++L +M ++G  PN   YT +I  LC+    ++A  L  +
Sbjct: 198 ISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSE 257

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M D G  PD V Y+ +L+GFC L  ++EA  L         +P   +++ L+DGL +   
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGM 317

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA   +  M ++  EP+   Y  ++ G     ++ +A K+L  M ++G  P  + YN 
Sbjct: 318 VSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNI 377

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C    LD+A+SL VE+ +++  P+T T++ L+ G+C+ G   +A  LF +M  +G
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTM 467
             P +  ++ L+DGLCK G L++A  L   M+  K  P + L                 +
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL--------------YNIL 483

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +E    AG +  A ++  +L   G  P I TY  +I G  K G  + A +LF++++  G 
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            P+S +Y  +I G  +      A R+  +M     +   + ++ L+    R    S
Sbjct: 544 LPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESRDEIIS 599



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 227/493 (46%), Gaps = 53/493 (10%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A A + +M      P VV +G  +  +++  +    + L + M   G+  + Y  N L
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C L  +  A S+  +++K    P+  TF  LI G C  G + +A  LFN+M + G 
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH 193

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P V  ++ +I+GLCK+G    A  L  KME  G  P L               +  T++
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNL--------------VAYTTII 239

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C   L++ A  +L ++ + G  PD++TY+++++GFC +G++N A  LF E+  + + 
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVM 299

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS- 587
           P++VT+  L++GL +     +A  +F  M + G  P+   Y +LM   C   +   A   
Sbjct: 300 PNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKV 359

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L +   +  +         I  + ++  ++ A   L+EM  K        Y+  + GLCQ
Sbjct: 360 LDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQ 419

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM-------------DVFL 694
            G+ +EALN+F  +     +    +   L+ GLCK G+LD A+             D+ L
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479

Query: 695 YT--LKNGFI------------------LRPRVCNY--LLRSLLFSKDNKKVHAYHLLCR 732
           Y   ++  FI                  ++P +  Y  +++ LL  K+     AY L  +
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL--KEGLSDEAYELFRK 537

Query: 733 MKSVGYDLDACLY 745
           M+  G+  ++C Y
Sbjct: 538 MEDDGFLPNSCSY 550



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 20/335 (5%)

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +D A +    + + +  P+   F   +  + +         L N+M+  G   +V   N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LI+ LC+   +  A  +  KM ++G  P              D  +  T++   C  G I
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQP--------------DAITFNTLINGRCIEGEI 178

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A  +  ++   G+ PD+I+Y+++ING CK GN + AL+L ++++ KG +P+ V Y T+
Sbjct: 179 KEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDI 596
           I+ L +     DA  +  +M   G  P    Y +++   C     + A  L+ + + R++
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
                     ++   ++G V  A      M  K  +     Y   + G C + Q+ EA  
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQK 358

Query: 657 IFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLA 689
           +  ++V+  C  +V   +   LI+G CKR  LD A
Sbjct: 359 VLDIMVDKGCAPVVHSYNI--LINGYCKRRRLDEA 391



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 85/194 (43%), Gaps = 1/194 (0%)

Query: 18  IEPALEPLLP-FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP 76
           +E + + L P  ++ +T+   + +   PQ     F        L    + S ++  L K 
Sbjct: 396 VEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKH 455

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
              D   + L  ++   +     ++ +LI G +  G  E A E F K+     QP +  Y
Sbjct: 456 GHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTY 515

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             ++    ++ L   A  ++ +M     LPN  +++++I G  ++  +  AI+++DEM  
Sbjct: 516 TIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVG 575

Query: 197 RGILPNKFTYTIVI 210
           +    +  T+ +++
Sbjct: 576 KRFSADSSTFQMLL 589


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 205/752 (27%), Positives = 338/752 (44%), Gaps = 78/752 (10%)

Query: 20  PALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
           P+L+ LLP ++ + V+S+     +P    +F  W ++    +    + A +  L+  +  
Sbjct: 57  PSLKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKI 116

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNA 138
                         VS V  +   +I   Y   D     +   KM + D  +  +  YN 
Sbjct: 117 --------------VSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNE 162

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +L +  R  L      +Y EM++     +I TF+L+IN   K G  + A + + +M Q G
Sbjct: 163 LLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAG 222

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           + P+ FT T  I G C+    D A+R+F +M +     + V+YN L++G C+  R+DEA+
Sbjct: 223 LSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAV 278

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           +L    + D   P + +Y+ LI GL R K   +A     +M E  + PD++ Y  +I G 
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQ 337

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
             AG +  A +LLS M+ERG+VPD   Y   I   C    +++AR L   + +     N 
Sbjct: 338 CRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANV 397

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +++LI G C+ G VD+A  LF KM    C P+   FNALI GLC AG L++A  LF +
Sbjct: 398 IMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQ 457

Query: 439 M-EIGKNPTLFL------RLSQGGNRVHDKASLQTM---------------VEQYCTAGL 476
           M ++G  PT++       R+ + G+       LQ M               +E YC+AG 
Sbjct: 458 MVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGK 517

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A  +++Q+ E G  PD  TY SLI  + K+G    A  + K +      P   T+ +
Sbjct: 518 VQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLS 577

Query: 537 LI---------------NGLQRVDREEDA--------------FRIFGQMPQNGCTPSPA 567
           LI                G++ V    D                 +F +M ++GCTP   
Sbjct: 578 LIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSK 637

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF---LQK-GEVENAIQGL 623
            Y+ L++  C+     +A  L  Q  ++     +    ++      LQK GE  N ++  
Sbjct: 638 CYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVE-- 695

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            +M    +  QL      + GL ++G+ +   ++F  L  C       +   LI G+ K+
Sbjct: 696 -DMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQ 754

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           G ++    +F    KNG    PR  + L + L
Sbjct: 755 GLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 230/528 (43%), Gaps = 87/528 (16%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  + G  ++A+  F +MK+  C P+VY Y A++    RK +   A+ +  EM++ N
Sbjct: 264 LIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEMLERN 322

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P+++T++ LI G  ++G  + A ++L  M +RG++P++ TY   I  LC+ NR +EA 
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA-------------------------- 257
           RLF  + + G S + + Y+ L++G+CK+ +VDEA                          
Sbjct: 383 RLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGL 442

Query: 258 ---------LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
                    L+L     K G  P + +++ LI  + +   +D+A+   +KM     +P  
Sbjct: 443 CSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVA 502

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y   I     AGKV++A  ++  M+E G+ PD + Y +LIK +  LGL   A  +   
Sbjct: 503 RTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKS 562

Query: 369 IWKRDSLPNTHTFTILI-----------------------------CGMCRNGMVDDAQK 399
           ++  D  P+ HTF  LI                               M +    D   +
Sbjct: 563 MFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIE 622

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFL--------- 449
           LF +MEK GC P    +  LI G+CK   L  A  L  +M+  G +P+  +         
Sbjct: 623 LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCC 682

Query: 450 ---RLSQGGNRVHDK---------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              +  +  N V D             +T++      G   +   +  +L   G   D I
Sbjct: 683 KLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEI 742

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +  LI+G  K G +    +LF+E++  G      TY  L   L   D
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGKD 790



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 205/487 (42%), Gaps = 90/487 (18%)

Query: 260 LLRSFEKDGFVP-RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           + R   KD      L  Y+ L+  L R    DE    Y +M EE +  D+  + +MI   
Sbjct: 143 ICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVY 202

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + G VK+A + +  M + G+ PD +   + I G+C    +D A  +  E+  R+ +   
Sbjct: 203 CKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV--- 259

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            ++  LI G+C  G +D+A  LF +M+   C+P+V  + ALI GLC+             
Sbjct: 260 -SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR------------- 305

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
               KN                                +HKA  +L ++ E   +PD+IT
Sbjct: 306 ----KN--------------------------------VHKAMGLLDEMLERNLVPDLIT 329

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YNSLI G C+ G+++ A +L   ++ +GL PD  TYG  I+ L + +R E+A R+F  + 
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLT 389

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + G + +  +Y  L+   C+                   G+ DE+    E+ L K    N
Sbjct: 390 EEGVSANVIMYSVLIDGYCK------------------VGKVDEAGCLFEKMLSKNCSPN 431

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A                  +   + GLC  G +KEAL++F  +V+     T  +   LI 
Sbjct: 432 AYT----------------FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIG 475

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
            + K+G  D A       + +G     R  N  +   ++    K   A  ++ +MK  G 
Sbjct: 476 RMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIE--VYCSAGKVQEAEDMMVQMKEEGV 533

Query: 739 DLDACLY 745
             D   Y
Sbjct: 534 PPDDFTY 540


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 170/595 (28%), Positives = 286/595 (48%), Gaps = 37/595 (6%)

Query: 113 DCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           D  +A   F KM KE +C+P+   Y+ +++          A  +  EMV+  C P+  T+
Sbjct: 244 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 303

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI      G T+ A+KMLDEM  +  +PN  TYTI+I  LC+  + +EA  +F KM  
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  P  + +NAL+NG+CK   V  A  LL   EK    P + +Y+ L++GL R  +  +
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+   R++ +  + PD V Y +++ G  + G++  A  + + M   G+ PD + + ALI 
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C LG L+QA  +   + K+    +  TFT LI G C+ G   D   LF  M +  C  
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   FN  +D L K  +L +AN +  K M+ G  P++               +   ++E 
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV--------------VTHTILIEG 589

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C AG    + K+L ++ ++G  P++ TY  +ING C  G +  A  +   +   G+ P+
Sbjct: 590 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 649

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA-FSLW 589
             TY  L+    +  R + AF+I   M +NGC P+  +Y +L++       F L+  ++ 
Sbjct: 650 HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG------FVLSNTAIG 703

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQ--GLLEMDFKLNDFQLAPYTIWLIGLCQ 647
            + L      D  S+ S E       + N I+  G+   D          Y   ++GLC+
Sbjct: 704 ARALSSTGDLDARSLSSEEN--DNNCLSNEIKKCGVPTEDL---------YNFLVVGLCK 752

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +G++ EA  +   +V+   +    +   +I   CK    D  ++     L N F+
Sbjct: 753 EGRIIEADQLTQDMVK-HGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFV 806



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 171/591 (28%), Positives = 269/591 (45%), Gaps = 61/591 (10%)

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           LD MT+ G   +   Y+ ++  L ++N    A+ ++ +M + G     + Y  ++N  CK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD--EAYAWYRKMF-EEKIEPD 307
              V  A        + GF   L ++ C    L   +R D  EA+  + KM  EE   P+
Sbjct: 207 NGFVQAAEMFCCKVLRLGF--GLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPN 264

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y ++I GL EAG++++A +L  +M E+G  P T  Y  LIK  CD+G+ D+A  +  
Sbjct: 265 SVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLD 324

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  +  +PN HT+TILI  +CR G +++A  +F KM K G  P +  FNALI+G CK G
Sbjct: 325 EMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 384

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            +  A  L   ME              GN   +  +   ++E  C     +KA+ +L ++
Sbjct: 385 WVVSAFQLLSVME-------------KGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            ++G LPD +TYN L++GFCK G +N A  +F  +   GL PD  T+  LI+GL ++ R 
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK------------------FSLAFSLW 589
           E A  I G M + G +     + +L+   C+  K                   +  F+ +
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551

Query: 590 LQYL-RDISGRDDESMKS-----------------IEEFLQKGEVENAIQGLLEMDFKLN 631
           L  L +D    +  +M                   IE   + GE   +++ L  M     
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
              +  YTI + GLC +G+V+EA  I   +          +   L+    K G LD A  
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 671

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +    +KNG      + + LL   + S  N  + A     R  S   DLDA
Sbjct: 672 IVSTMVKNGCQPNSHIYSALLSGFVLS--NTAIGA-----RALSSTGDLDA 715



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 156/630 (24%), Positives = 288/630 (45%), Gaps = 54/630 (8%)

Query: 47  GFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
            FR F   +K +  R +  + S +I  L +    +  +Q   E+        +  + VLI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
                +G  +KA++   +M    C P+V+ Y  +++   R+     A  V+ +M+K    
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 367

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P I+TF+ LING  K G    A ++L  M +    PN  TY  ++ GLC+++++ +A+ L
Sbjct: 368 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 427

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             ++ D+G  PD V YN L++GFCK  +++ A  +  S    G  P   +++ LIDGL +
Sbjct: 428 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 487

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R ++A      M ++ I  D V +  +I G  + GK KD   L  +M E   +   + 
Sbjct: 488 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 547

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N  +        L++A ++  ++ K   +P+  T TILI G CR G    + K+  +M+
Sbjct: 548 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           +AGC P+V  +  +I+GLC  G +E+A  + + M   G +P  F              + 
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF--------------TY 653

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK--EL 522
             +V+ +  AG + +A++I+  + ++G  P+   Y++L++GF       GA  L    +L
Sbjct: 654 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL 713

Query: 523 QLKGLR------------------PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             + L                   P    Y  L+ GL +  R  +A ++   M ++G  P
Sbjct: 714 DARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 773

Query: 565 SPAVYKSLMTWSCRRRKF-----------------SLAFSLWLQYLRDISGRDDESMKSI 607
             A+  S++   C+  K+                 S A   W+ +     GR  E+ K +
Sbjct: 774 DKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLV 832

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + ++   +E  ++    ++F + + +  P
Sbjct: 833 SDLVRHTGIEEEVEVTPSIEFLMKEEEDDP 862



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 168/390 (43%), Gaps = 22/390 (5%)

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           SE G VK  M  L  M E G      CY+ L+     L +   A  +   +     +   
Sbjct: 136 SENGVVK-LMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGG 194

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  ++  +C+NG V  A+    K+ + G      +  +L+   C+  +L +A  +F K
Sbjct: 195 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 254

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M            S+  N   +  +   ++   C AG + +A+++  ++ E G  P   T
Sbjct: 255 M------------SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 302

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  LI   C +G  + A+K+  E+  K   P+  TY  LI+ L R  + E+A  +F +M 
Sbjct: 303 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 362

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVE 617
           ++G  P    + +L+   C+      AF L L  +    G    ++++  E ++    V 
Sbjct: 363 KHGLCPGIITFNALINGYCKEGWVVSAFQL-LSVME--KGNCKPNIRTYNELMEGLCRVS 419

Query: 618 NAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            + +  L +  ++ D  L P    Y I + G C++GQ+  A NIF+ +          + 
Sbjct: 420 KSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 478

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
             LI GLCK G L+ A  +    +K G  L
Sbjct: 479 TALIDGLCKLGRLEQANGILGSMVKKGISL 508


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 180/659 (27%), Positives = 319/659 (48%), Gaps = 55/659 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E  C P+V+ Y+ +L       +   AL ++  M K    C PN+V ++ +I+G  K
Sbjct: 218 RMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFK 277

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+T  A  +  EMT++G+ P+  TY ++I  LC+    D+A  +  +M  +G  PD V 
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVT 337

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN +++G+  L R+ EA  + R  +  G +P +   +  +  L +  R  EA   +  M 
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  +PD+V Y  ++ G +  G   D + L + M+  GI  D   +N LI  +   G++D
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A  +  E+ ++   P+  T++ +I    R G + DA + FN+M   G  P+  +++++I
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517

Query: 421 DGLCKAGELEKANLLFYKM------------------------EIGKNPTLFLRLSQGGN 456
            G C  G L KA  L  +M                         +     +F  ++  G 
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGE 577

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           R  D  +  ++++ YC  G + KA+KIL  +   G   DI+TY++L++G+ K G IN  L
Sbjct: 578 R-PDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGL 636

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+E+Q KG++P++VTYG ++ GL R  R   A + F +M ++G T + ++Y  ++   
Sbjct: 637 TLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGL 696

Query: 577 CRRRKFSLAFSLW-------LQYLRDISGRDDESMKSIEEFLQKGEVENAI--QGLLEMD 627
           CR      A  L+       +++   I      +M  ++   +  E+   I   GLL  +
Sbjct: 697 CRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGY 685
                   + Y + +I L +DG V++A N+FS +   K+ + P S +  ++I  L ++G 
Sbjct: 757 --------STYGVMIINLLKDGAVEDANNMFSSME--KSGIVPGSRLLNRIIRMLLEKGE 806

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD-LDAC 743
           +  A + +L  +    IL       L+ S LFS+  K    YH   ++    Y+  D C
Sbjct: 807 IAKAGN-YLSKVDGKRILLEASTTSLMLS-LFSRKGK----YHEDMKLLPAKYNFFDGC 859



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 265/568 (46%), Gaps = 22/568 (3%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK-ML 191
           V+ Y+ +++   R +   L L ++  +++     + +T S L+  L  + +TE A+  +L
Sbjct: 157 VHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSPDFVAYNALLNGFC 249
             M++ G +PN F+Y+I++ GLC  + +  A  LF  M   G  CSP+ VAYN +++GF 
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K     +A +L     + G  P + +Y+ +ID L +A+  D+A    R+M     +PD V
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  MI G +  G++K+A K+   M+ RG++P+    N+ +   C  G   +A  +   +
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +   P+  ++  L+ G    G   D   LFN M+  G      +FN LI    K G +
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMV 456

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           + A L+F +M + G +P              D  +  T++  +   G +  A +   Q+ 
Sbjct: 457 DDAMLIFTEMQQQGVSP--------------DVVTYSTVISAFSRMGRLTDAMEKFNQMV 502

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL-RPDSVTYGTLINGLQRVDRE 547
             G  P+   Y+S+I GFC  G +  A +L  E+  KG+ RPD V + ++IN L +  R 
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
            DA  IF  +   G  P    + SL+   C   K   AF + L  +  +    D    S 
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKI-LDAMEVVGVETDIVTYST 621

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            ++ + + G + + +    EM  K        Y I L GL + G+   A   F  ++E  
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             VT      ++ GLC+    D A+ +F
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILF 709



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/550 (26%), Positives = 244/550 (44%), Gaps = 62/550 (11%)

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
           +     DL+     E  + + +VV+  +  +I G++K G+  KA   F +M     +PDV
Sbjct: 243 MSQRALDLFQMMAKEGGACSPNVVA--YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDV 300

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             YN +++   + +    A  V  +M      P+ VT++ +I+G +  G+ + A KM  +
Sbjct: 301 VTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK 360

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  RG++PN       ++ LC+  R+ EA  +F  M   G  PD V+Y  LL+G+     
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             + + L  S + +G       ++ LI    +    D+A   + +M ++ + PDVV Y  
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE-IWKR 372
           +I   S  G++ DAM+  + M  RGI P+T  Y+++I+GFC  G L +A+ L  E I K 
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+   F  +I  +C++G V DA  +F+ +   G  P V  F +LIDG C  G+++KA
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600

Query: 433 NLLFYKME-----------------------IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +   ME                       I    TLF  + + G +  +  +   M+ 
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVK-PNTVTYGIMLA 659

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC-------------KVGNIN--- 513
               AG    A K   ++ ESG    +  Y  ++ G C             K+G +N   
Sbjct: 660 GLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKF 719

Query: 514 -------------------GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
                               A +LF  +   GL P+  TYG +I  L +    EDA  +F
Sbjct: 720 SITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMF 779

Query: 555 GQMPQNGCTP 564
             M ++G  P
Sbjct: 780 SSMEKSGIVP 789



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 201/436 (46%), Gaps = 51/436 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            + ++S  ++    VF +LI  Y K G  + A+  F +M++    PDV  Y+ V++   R
Sbjct: 428 FNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSR 487

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKF 204
                 A+  + +MV     PN   +  +I G    G    A +++ EM  +GI  P+  
Sbjct: 488 MGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIV 547

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            +  VI+ LC+  R  +A+ +F  + D G  PD + + +L++G+C + ++D+A  +L + 
Sbjct: 548 FFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           E  G    + +YS L+DG F+  R ++    +R+M  + ++P+ V YG+M+ GL  AG+ 
Sbjct: 608 EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRT 667

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFC-------------DLGLL------------ 359
             A K   +M E G       Y  ++ G C              LG +            
Sbjct: 668 VAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTM 727

Query: 360 ----------DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
                     ++A+ L   I     LPN  T+ ++I  + ++G V+DA  +F+ MEK+G 
Sbjct: 728 INAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGI 787

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT-MV 468
            P   + N +I  L + GE+ KA     K++              G R+  +AS  + M+
Sbjct: 788 VPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD--------------GKRILLEASTTSLML 833

Query: 469 EQYCTAGLIHKAYKIL 484
             +   G  H+  K+L
Sbjct: 834 SLFSRKGKYHEDMKLL 849


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 262/534 (49%), Gaps = 21/534 (3%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNV------SVVSDVFFVLISGYYKVGDC 114
           R+F+S S     +L+    D+       L  G V      S+V   F  L+S   K+   
Sbjct: 6   RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE--FNKLLSAIAKMKKF 63

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +  +    KM+  +    +Y YN ++N   R+    LALA+  +M+KL   P+IVT S L
Sbjct: 64  DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 123

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           +NG     +   A+ ++D+M + G  P+  T+T +I GL   N+A EA  L  +M   GC
Sbjct: 124 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 183

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  ++NG CK    D AL LL   E       +  ++ +ID L + +  D+A  
Sbjct: 184 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 243

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            +++M  + I P+VV Y  +I  L   G+  DA +LLSDM E+ I P+   +NALI  F 
Sbjct: 244 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 303

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G   +A  L  ++ KR   P+  T+  L+ G C +  +D A+++F  M    CFP V 
Sbjct: 304 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI G CK+  +E    LF +M            S  G  V D  +  T+++     
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREM------------SHRG-LVGDTVTYTTLIQGLFHD 410

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G    A K+  Q+   G  PDI+TY+ L++G C  G +  AL++F  +Q   ++ D   Y
Sbjct: 411 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 470

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            T+I G+ +  + +D + +F  +   G  P+   Y ++++  C +R    A++L
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 524



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 284/595 (47%), Gaps = 57/595 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  MVK   LP+IV F+ L++ ++K  K +V I + ++M +  I+   +TY I+I+
Sbjct: 31  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  L  KM   G  P  V  ++LLNG+C  +R+ +A+AL+    + G+ P
Sbjct: 91  CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M +   +P++V YGV++ GL + G    A+ LL
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 210

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M    I  D   +N +I   C    +D A +L  E+  +   PN  T++ LI  +C  
Sbjct: 211 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 270

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P++  FNALID   K G+  +A  L+  M +   +P +F  
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-- 328

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  ++V  +C    + KA ++   +      PD++TYN+LI GFCK  
Sbjct: 329 ------------TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +    +LF+E+  +GL  D+VTY TLI GL      ++A ++F QM  +G  P    Y 
Sbjct: 377 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 436

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C   K   A  ++                   +++QK E++             
Sbjct: 437 ILLDGLCNNGKLEKALEVF-------------------DYMQKSEIK------------- 464

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
               +  YT  + G+C+ G+V +  ++F  L   K +   P+ V    +I GLC +  L 
Sbjct: 465 --LDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQ 519

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +     ++G +      N L+R+ L  +D  K  +  L+  M+S  +  DA
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 572



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 263/556 (47%), Gaps = 59/556 (10%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    K + L S    + ++S + K   FD+     ++++   +      + +LI+ + 
Sbjct: 34  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 93

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +P +   +++LN     +    A+A+  +MV++   P+ +
Sbjct: 94  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 153

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M QRG  PN  TY +V++GLC+    D A  L  KM
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           + +    D V +N +++  CK R VD+AL L +  E  G  P + +YS LI  L    R+
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E+KI P++V +  +I    + GK  +A KL  DM +R I PD + YN+L
Sbjct: 274 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 333

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------------------- 390
           + GFC    LD+A+ +   +  +D  P+  T+  LI G C+                   
Sbjct: 334 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 393

Query: 391 ----------------NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
                           +G  D+AQK+F +M   G  P +  ++ L+DGLC  G+LEKA  
Sbjct: 394 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 453

Query: 435 LF---YKMEIGKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYC 472
           +F    K EI  +  ++  + +G     +V D   L                 TM+   C
Sbjct: 454 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 513

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
           +  L+ +AY +L ++ E G LP+  TYN+LI    + G+   + +L +E++      D+ 
Sbjct: 514 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 573

Query: 533 TYGTLINGLQ--RVDR 546
           T G + N L   R+D+
Sbjct: 574 TIGLVANMLHDGRLDK 589



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G   F   + R  +    + + +I  L      D   +   ++ S  V     
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G    G  EKALE F  M++ + + D+YIY                       
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 470

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                       + +I G+ K+GK +    +   ++ +G+ PN  TY  +ISGLC     
Sbjct: 471 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
            EAY L  KMK+ G  P+   YN L+     LR  D+A +  L+R      FV    +  
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 576

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 577 -LVANMLHDGRLDKSF 591


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 301/620 (48%), Gaps = 21/620 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FD   + L E+R     + +  + VLI+G  + G  E+A      M+++   PD + Y A
Sbjct: 238 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 297

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N   + +    A A+  EM      PN+V ++ LI+G  + G  + A KM+ EM   G
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           + PNK TY  ++ GLC++ + D A  L  +M      PD + YN ++ G  +     +A 
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL   E  G  P + +YS +I GL ++   ++A     +M  + ++P+  +Y  +I G 
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
              G V  A ++   M +  ++PD YCYN+LI G   +G ++++     ++ +R  LPN 
Sbjct: 478 CREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNE 537

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T++ LI G  +NG ++ A++L  +M   G  P+  ++  L++   K+ ++EK +  F  
Sbjct: 538 FTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKS 597

Query: 439 MEIGKNPTLFLRLSQG---GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M           L QG    NR++       ++    ++G +  A+++L  + ++G++PD
Sbjct: 598 M-----------LDQGVMLDNRIYG-----ILIHNLSSSGNMEAAFRVLSGIEKNGSVPD 641

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +  Y+SLI+G CK  +   A  +  E+  KG+ P+ V Y  LI+GL +      A  +F 
Sbjct: 642 VHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFN 701

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-G 614
            +   G  P+   Y SL+  SC+    S AF L+ + L      D      +       G
Sbjct: 702 SILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAG 761

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           ++E A+  L+E  F      ++ +   + G C+ G+++E L +  V++    +    +  
Sbjct: 762 DLEQAMF-LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 820

Query: 675 KLIHGLCKRGYLDLAMDVFL 694
            +I GL + G L     +F+
Sbjct: 821 NIISGLSEAGKLSEVHTIFV 840



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/626 (25%), Positives = 283/626 (45%), Gaps = 67/626 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I   ++    D  ++ + E+ +  V      +  L+ G  K+G  ++A     +M    
Sbjct: 333 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 392

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +PD   YN ++   FR      A  +  EM      PN+ T+S++I+GL +SG+ E A 
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L+EMT +G+ PN F Y  +ISG C+      A  +F KM      PD   YN+L+ G 
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+ RV+E+       ++ G +P   +YS LI G  +    + A    ++M +  ++P+ 
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 309 VLY-----------------------------------GVMIRGLSEAGKVKDAMKLLSD 333
           V+Y                                   G++I  LS +G ++ A ++LS 
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + + G VPD + Y++LI G C     ++A  +  E+ K+   PN   +  LI G+C++G 
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           +  A+ +FN +   G  P+   + +LIDG CK G++  A  L+ +M   G  P  F+   
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV--- 749

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                         +     +AG + +A  ++ ++   G+   I ++N+L++GFCK G +
Sbjct: 750 -----------YSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLVDGFCKRGKM 797

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              LKL   +  +GL P+++T   +I+GL    +  +   IF ++ Q             
Sbjct: 798 QETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK------------ 845

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
            T     R FS   SL++  +       D     I +  ++G ++ A+     +  K   
Sbjct: 846 -TSESAARHFS---SLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAP 901

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIF 658
              + Y   +  LC+ G++ EALN+ 
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLL 927



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 259/539 (48%), Gaps = 28/539 (5%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C++   D A ++ ++M++ GC  + V YN L+ G C+   V+EA    +  E  G VP  
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y  LI+GL +++R +EA A   +M   +++P+VV+Y  +I G    G   +A K++ +
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G+ P+   Y+ L++G C +G +D+A  L  ++ +    P+T T+ ++I G  R+  
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLS 452
             DA +L ++ME AG  P+V  ++ +I GLC++GE EKA+ L  +M   G  P  F+   
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV--- 469

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                         ++  YC  G +  A +I  ++ +   LPD+  YNSLI G  KVG +
Sbjct: 470 -----------YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV 518

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             + K F ++Q +GL P+  TY  LI+G  +    E A ++  +M   G  P+  +Y  L
Sbjct: 519 EESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDL 578

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--LEMDFK 629
           +    +        S +   L      D+      I      G +E A + L  +E +  
Sbjct: 579 LESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGS 638

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYL 686
           + D  +  Y+  + GLC+    ++A   F +L E       P+ V    LI GLCK G +
Sbjct: 639 VPDVHV--YSSLISGLCKTADREKA---FGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 693

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             A +VF   L  G +  P    Y        K     +A++L   M + G   DA +Y
Sbjct: 694 SYARNVFNSILAKGLV--PNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 218/497 (43%), Gaps = 64/497 (12%)

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
           G +   ++   + + +D A     +M E     + V Y V+I GL  +G V++A     D
Sbjct: 223 GRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKD 282

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M + G+VPD + Y ALI G C     ++A++L  E+   +  PN   +  LI G  R G 
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 342

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--EIGKNPTLFLRL 451
            D+A K+  +M  AG  P+   ++ L+ GLCK G++++A+LL  +M  +  +  T+   L
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402

Query: 452 -SQGGNRVHDKA-------------------SLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +G  R H K                    +   M+   C +G   KA  +L ++   G
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+   Y  LI+G+C+ GN++ A ++F ++    + PD   Y +LI GL +V R E++ 
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           + F QM + G  P+   Y  L                                  I  +L
Sbjct: 523 KYFAQMQERGLLPNEFTYSGL----------------------------------IHGYL 548

Query: 612 QKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           + G++E+A   +Q +L+   K ND     Y   L    +   +++  + F  +++   ++
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVI---YIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
                  LIH L   G ++ A  V     KNG +    V + L+  L  + D +K  A+ 
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK--AFG 663

Query: 729 LLCRMKSVGYDLDACLY 745
           +L  M   G D +   Y
Sbjct: 664 ILDEMSKKGVDPNIVCY 680



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 181/419 (43%), Gaps = 21/419 (5%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           ++F    +R  L +  + S +I   LK    +   Q +  +    +     ++  L+  Y
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K  D EK   +F  M +     D  IY  +++          A  V   + K   +P++
Sbjct: 583 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 642

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +S LI+GL K+   E A  +LDEM+++G+ PN   Y  +I GLC+      A  +F  
Sbjct: 643 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+ V Y +L++G CK+  +  A  L       G  P    YS L  G   A  
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 762

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A     +MF  +    +  +  ++ G  + GK+++ +KLL  +  RG+VP+      
Sbjct: 763 LEQAMFLIEEMF-LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM------------------CR 390
           +I G  + G L +  ++ VE+ ++ S      F+ L   M                  C+
Sbjct: 822 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 881

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN--PTL 447
            G +D A  L + +           + A++D LC+ G+L +A  L  +M+   N  PTL
Sbjct: 882 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 940



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 53/368 (14%)

Query: 41  TKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV 100
           + N +  FR      K   +      S++IS L K    +  +  LDE+    V      
Sbjct: 620 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G  K GD   A                 ++N++L                    
Sbjct: 680 YNALIDGLCKSGDISYARN---------------VFNSILAKGL---------------- 708

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN VT++ LI+G  K G    A  + +EM   GI P+ F Y+++ +G       +
Sbjct: 709 ----VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLE 764

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M   G +    ++N L++GFCK  ++ E L LL      G VP   +   +I
Sbjct: 765 QAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENII 823

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL  A +  E +  + ++ ++  E                   +    L  DM  +G +
Sbjct: 824 SGLSEAGKLSEVHTIFVELQQKTSE----------------SAARHFSSLFMDMINQGKI 867

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P     + +I+  C  G LD+A  L+  I  + +     ++  ++  +CR G + +A  L
Sbjct: 868 P-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 926

Query: 401 FNKMEKAG 408
             +M+K G
Sbjct: 927 LKEMDKRG 934


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 262/534 (49%), Gaps = 21/534 (3%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNV------SVVSDVFFVLISGYYKVGDC 114
           R+F+S S     +L+    D+       L  G V      S+V   F  L+S   K+   
Sbjct: 44  RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE--FNKLLSAIAKMKKF 101

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +  +    KM+  +    +Y YN ++N   R+    LALA+  +M+KL   P+IVT S L
Sbjct: 102 DVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           +NG     +   A+ ++D+M + G  P+  T+T +I GL   N+A EA  L  +M   GC
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  ++NG CK    D AL LL   E       +  ++ +ID L + +  D+A  
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            +++M  + I P+VV Y  +I  L   G+  DA +LLSDM E+ I P+   +NALI  F 
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G   +A  L  ++ KR   P+  T+  L+ G C +  +D A+++F  M    CFP V 
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI G CK+  +E    LF +M            S  G  V D  +  T+++     
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREM------------SHRG-LVGDTVTYTTLIQGLFHD 448

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G    A K+  Q+   G  PDI+TY+ L++G C  G +  AL++F  +Q   ++ D   Y
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            T+I G+ +  + +D + +F  +   G  P+   Y ++++  C +R    A++L
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 284/595 (47%), Gaps = 57/595 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  MVK   LP+IV F+ L++ ++K  K +V I + ++M +  I+   +TY I+I+
Sbjct: 69  AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  L  KM   G  P  V  ++LLNG+C  +R+ +A+AL+    + G+ P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M +   +P++V YGV++ GL + G    A+ LL
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M    I  D   +N +I   C    +D A +L  E+  +   PN  T++ LI  +C  
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P++  FNALID   K G+  +A  L+  M +   +P +F  
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF-- 366

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  ++V  +C    + KA ++   +      PD++TYN+LI GFCK  
Sbjct: 367 ------------TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +    +LF+E+  +GL  D+VTY TLI GL      ++A ++F QM  +G  P    Y 
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C   K   A  ++                   +++QK E++             
Sbjct: 475 ILLDGLCNNGKLEKALEVF-------------------DYMQKSEIK------------- 502

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLD 687
               +  YT  + G+C+ G+V +  ++F  L   K +   P+ V    +I GLC +  L 
Sbjct: 503 --LDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQ 557

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +     ++G +      N L+R+ L  +D  K  +  L+  M+S  +  DA
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 610



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 263/556 (47%), Gaps = 59/556 (10%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    K + L S    + ++S + K   FD+     ++++   +      + +LI+ + 
Sbjct: 72  LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +P +   +++LN     +    A+A+  +MV++   P+ +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ LI+GL    K   A+ ++D M QRG  PN  TY +V++GLC+    D A  L  KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           + +    D V +N +++  CK R VD+AL L +  E  G  P + +YS LI  L    R+
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A      M E+KI P++V +  +I    + GK  +A KL  DM +R I PD + YN+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------------------- 390
           + GFC    LD+A+ +   +  +D  P+  T+  LI G C+                   
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431

Query: 391 ----------------NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
                           +G  D+AQK+F +M   G  P +  ++ L+DGLC  G+LEKA  
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491

Query: 435 LF---YKMEIGKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYC 472
           +F    K EI  +  ++  + +G     +V D   L                 TM+   C
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
           +  L+ +AY +L ++ E G LP+  TYN+LI    + G+   + +L +E++      D+ 
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611

Query: 533 TYGTLINGLQ--RVDR 546
           T G + N L   R+D+
Sbjct: 612 TIGLVANMLHDGRLDK 627



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G   F   + R  +    + + +I  L      D   +   ++ S  V     
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G    G  EKALE F  M++ + + D+YIY                       
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 508

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                       + +I G+ K+GK +    +   ++ +G+ PN  TY  +ISGLC     
Sbjct: 509 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
            EAY L  KMK+ G  P+   YN L+     LR  D+A +  L+R      FV    +  
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 614

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 615 -LVANMLHDGRLDKSF 629


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 235/462 (50%), Gaps = 13/462 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           +L   GKM +   +P +   +++LN     +    A+A+  +MV++   P+ +TF+ LI+
Sbjct: 63  SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 122

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL    K   A+ ++D M QRG  PN  TY +V++GLC+    D A+ L  KM+ +    
Sbjct: 123 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 182

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V +N +++  CK R VD+AL L +  E  G  P + +YS LI  L    R+ +A    
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M E+KI P++V +  +I    + GK  +A KL  DM +R I PD + YN+LI GFC  
Sbjct: 243 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 302

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             LD+A+ +   +  +D  P+  T+  LI G C++  V+D  +LF +M   G       +
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 362

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
             LI GL   G+ + A  +F +M     P              D  +   +++  C  G 
Sbjct: 363 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-------------DIMTYSILLDGLCNNGK 409

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA ++   + +S    DI  Y ++I G CK G ++    LF  L LKG++P+ VTY T
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           +I+GL      ++A+ +  +M ++G  P    Y +L+    R
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 511



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 265/531 (49%), Gaps = 17/531 (3%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF--LLALAVY 156
           D  FV IS + K    + A+  FG M +    P ++ +N +L+   + + F  +++LA+ 
Sbjct: 9   DCLFVGIS-WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALL 67

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M+KL   P+IVT S L+NG     +   A+ ++D+M + G  P+  T+T +I GL   
Sbjct: 68  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 127

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N+A EA  L  +M   GC P+ V Y  ++NG CK   +D A  LL   E       +  +
Sbjct: 128 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 187

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +ID L + +  D+A   +++M  + I P+VV Y  +I  L   G+  DA +LLSDM E
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           + I P+   +NALI  F   G   +A  L  ++ KR   P+  T+  LI G C +  +D 
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A+++F  M    CFP +  +N LI G CK+  +E    LF +M            S  G 
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM------------SHRG- 354

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            V D  +  T+++     G    A K+  Q+   G  PDI+TY+ L++G C  G +  AL
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           ++F  +Q   ++ D   Y T+I G+ +  + +D + +F  +   G  P+   Y ++++  
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
           C +R    A++L  +   D    D  +  + I   L+ G+   + + + EM
Sbjct: 475 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/594 (26%), Positives = 271/594 (45%), Gaps = 66/594 (11%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +YY   + +CL   +++        K  K + AI +   M +   LP+ F +  ++S + 
Sbjct: 1   MYYHPRRRDCLFVGISWG-------KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIA 53

Query: 215 QINRADEAYRLFL--KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           ++ + D    L L  KM   G  P  V  ++LLNG+C  +R+ +A+AL+    + G+ P 
Sbjct: 54  KMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 113

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +++ LI GLF   +  EA A   +M +   +P++V YGV++ GL + G +  A  LL+
Sbjct: 114 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 173

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M    I  D   +N +I   C    +D A +L  E+  +   PN  T++ LI  +C  G
Sbjct: 174 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 233

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
              DA +L + M +    P++  FNALID   K G+  +A  L   M +   +P +F   
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF--- 290

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  +++  +C    + KA ++   +      PD+ TYN+LI GFCK   
Sbjct: 291 -----------TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +    +LF+E+  +GL  D+VTY TLI GL      ++A ++F QM  +G  P    Y  
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C   K   A  ++                   +++QK E++              
Sbjct: 400 LLDGLCNNGKLEKALEVF-------------------DYMQKSEIK-------------- 426

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
              +  YT  + G+C+ G+V +  ++F  L   K +   P+ V    +I GLC +  L  
Sbjct: 427 -LDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGV--KPNVVTYNTMISGLCSKRLLQE 482

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           A  +     ++G +      N L+R+ L  +D  K  +  L+  M+S  +  DA
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHL--RDGDKAASAELIREMRSCRFVGDA 534



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 199/403 (49%), Gaps = 8/403 (1%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  +   V++ L K    DL +  L+++ +  +     +F  +I    K    + AL  F
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M+    +P+V  Y+++++       +  A  +  +M++    PN+VTF+ LI+   K 
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK   A K+ D+M +R I P+ FTY  +I+G C  +R D+A ++F  M    C PD   Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ GFCK +RV++   L R     G V    +Y+ LI GLF     D A   +++M  
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + + PD++ Y +++ GL   GK++ A+++   M++  I  D Y Y  +I+G C  G +D 
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
              L   +  +   PN  T+  +I G+C   ++ +A  L  KM++ G  P  G +N LI 
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507

Query: 422 GLCKAGELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHD 460
              + G+   +  L  +M     +G   T+ L      N +HD
Sbjct: 508 AHLRDGDKAASAELIREMRSCRFVGDASTIGLV----ANMLHD 546



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G   F   + R  +    + + +I  L      D   +   ++ S  V     
Sbjct: 336 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 395

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G    G  EKALE F  M++ + + D+YIY                       
Sbjct: 396 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY----------------------- 432

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                       + +I G+ K+GK +    +   ++ +G+ PN  TY  +ISGLC     
Sbjct: 433 ------------TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--LLRSFEKDGFVPRLGSYS 277
            EAY L  KMK+ G  PD   YN L+     LR  D+A +  L+R      FV    +  
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRA--HLRDGDKAASAELIREMRSCRFVGDASTIG 538

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 539 -LVANMLHDGRLDKSF 553


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 285/596 (47%), Gaps = 41/596 (6%)

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAV 155
            S VF +++  Y ++   +KAL      +     P V  YNAVL+   R K+    A  V
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           + EM++    PN+ T+++LI G   +G  +VA++  D M ++G LPN  TY  +I G C+
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           + + D+ + L   M   G  P+ ++YN ++NG C+  R+ E   +L    K G+     +
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI G  +   + +A   + +M    + P V+ Y  +I  + +AG +  A + L  MR
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG+ P+   Y  L+ GF   G +++A  +  E+      P+  T+  LI G C  G + 
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA  +   M++ G  P V  ++ ++ G C++ ++++A  +  KM   G  P         
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP--------- 483

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D  +  ++++ +C      +A  +  ++   G  PD  TY +LIN +C  G++  
Sbjct: 484 -----DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQK 538

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A++L  E+  KG+ PD VTY  LINGL +  R  +A R+  ++      PS   Y +L+ 
Sbjct: 539 AIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIE 598

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG---EVENAIQGLLEMDFKLN 631
            +C   +F    SL                  I+ F  KG   E +   + +LE + K +
Sbjct: 599 -NCSNIEFKSVVSL------------------IKGFCMKGMMTEADQVFESMLEKNHKPD 639

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                 Y + + G C+ G +++A +++  +V+   ++   + + L+  L K G ++
Sbjct: 640 G---TAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN 692



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 272/573 (47%), Gaps = 38/573 (6%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE-A 222
           C      F L++   S+    + A+ ++      G +P   +Y  V+    +  R    A
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F +M  S  SP+   YN L+ GFC    +D AL      EK G +P + +Y+ LIDG
Sbjct: 190 ENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + ++ D+ +   R M  + +EP+++ Y V+I GL   G++K+   +L++M +RG   D
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LIKG+C  G   QA  +  E+ +    P+  T+T LI  MC+ G ++ A +  +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLD 369

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G  P+   +  L+DG  + G + +A  +  +M + G +P++              
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSV-------------- 415

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++  +C AG +  A  +L  + E G  PD+++Y+++++GFC+  +++ AL++ ++
Sbjct: 416 VTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRK 475

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  KG++PD++TY +LI G     R ++A  +F +M + G  P    Y +L+   C    
Sbjct: 476 MVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGD 535

Query: 582 FSLAFSLW------------LQYLRDISGRDDES-MKSIEEFLQKGEVENAI------QG 622
              A  L             + Y   I+G + ++  +  +  L K   E ++        
Sbjct: 536 LQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHT 595

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L+E     ++ +       + G C  G + EA  +F  ++E        +   +IHG C+
Sbjct: 596 LIE---NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCR 652

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            G +  A  ++   +K+GF+L       L+++L
Sbjct: 653 GGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTL 685



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 245/501 (48%), Gaps = 33/501 (6%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           N  V  RFF    K+  L +  + + +I    K    D  ++ L  +    +      + 
Sbjct: 220 NLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYN 279

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           V+I+G  + G  ++      +M +     D   YN ++    ++  F  AL ++ EM++ 
Sbjct: 280 VVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+++T++ LI+ + K+G    A + LD+M  RG+ PN+ TYT ++ G  Q    +EA
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           YR+  +M D+G SP  V YNAL+NG C   ++ +A+A+L   ++ G  P + SYS ++ G
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R+   DEA    RKM  + I+PD + Y  +I+G  E  + K+A  L  +M   G+ PD
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + Y ALI  +C  G L +A  L  E+ ++  LP+  T+++LI G+ +     +A++L  
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           K+      PS   ++ LI+          +N+ F                          
Sbjct: 580 KLFYEESVPSDVTYHTLIENC--------SNIEF-------------------------K 606

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S+ ++++ +C  G++ +A ++   + E  + PD   YN +I+G C+ G+I  A  L+KE+
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666

Query: 523 QLKGLRPDSVTYGTLINGLQR 543
              G    +VT   L+  L +
Sbjct: 667 VKSGFLLHTVTVIALVKTLHK 687



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 258/556 (46%), Gaps = 31/556 (5%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    VS     + +LI G+   G+ + AL  F +M++  C P+V  YN +++   + +
Sbjct: 195 EMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLR 254

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                  +   M      PN+++++++INGL + G+ +    +L EM +RG   ++ TY 
Sbjct: 255 KIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYN 314

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G C+     +A  +  +M   G SP  + Y +L++  CK   ++ A   L      
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR 374

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P   +Y+ L+DG  +    +EAY   ++M +    P VV Y  +I G   AGK+ DA
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDA 434

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           + +L DM+E+G+ PD   Y+ ++ GFC    +D+A  ++ ++  +   P+T T++ LI G
Sbjct: 435 IAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQG 494

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
            C      +A  LF++M + G  P    + ALI+  C  G+L+KA  L  +M E G  P 
Sbjct: 495 FCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLP- 553

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN------ 500
                        D  +   ++          +A ++L++L    ++P  +TY+      
Sbjct: 554 -------------DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 501 ---------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
                    SLI GFC  G +  A ++F+ +  K  +PD   Y  +I+G  R      A+
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAY 660

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            ++ +M ++G         +L+    +  K +   S+    LR     + E  K + E  
Sbjct: 661 SLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEIN 720

Query: 612 QK-GEVENAIQGLLEM 626
            + G ++  +  L EM
Sbjct: 721 HREGNMDVVLDVLAEM 736



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 149/345 (43%), Gaps = 15/345 (4%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++ L E+     S     +  LI+G+   G    A+     MKE    PDV  Y+ VL+ 
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R      AL V  +MV     P+ +T+S LI G  +  +T+ A  + DEM + G+ P+
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           +FTYT +I+  C      +A +L  +M + G  PD V Y+ L+NG  K  R  EA  LL 
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579

Query: 263 SFEKDGFVPRLGSYSCLID---------------GLFRAKRYDEAYAWYRKMFEEKIEPD 307
               +  VP   +Y  LI+               G        EA   +  M E+  +PD
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
              Y VMI G    G ++ A  L  +M + G +  T    AL+K     G +++  S+  
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            + +   L       +L+    R G +D    +  +M K G  P+
Sbjct: 700 NVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 195/731 (26%), Positives = 336/731 (45%), Gaps = 63/731 (8%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFD 80
           LE L   L+   V  V++  K+  +   FF WA ++     +  + + +I  L      D
Sbjct: 140 LERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETD 199

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
              Q L  +      +   +   L+  +    +   ALE F +MK F C P   +YN VL
Sbjct: 200 AVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVL 259

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
            +  +   +  A+ V+ ++ +    P+  TF + ++  ++SG+ + A + + EM + GI 
Sbjct: 260 ELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGID 319

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   T+T++I  L +    DEA + F  MK+  CSP+ V Y  L+NG  K  R++EA  +
Sbjct: 320 PGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEV 379

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
               +++   P   +Y+ LIDGL +A   D A   +++M +  + P++  Y +MI  L +
Sbjct: 380 FVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGK 439

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE--------IWKR 372
           AG+  +A +L  D++E+G VPD + YN LI      G +D+  ++  E        I  R
Sbjct: 440 AGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISR 499

Query: 373 DSLPNTH-----------------------TFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           DS                            T+  L+     NG VD+A KL   M+K  C
Sbjct: 500 DSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHEC 559

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGN---RVHDKASLQ 465
            P+V  +  L+DGL KAG L++A  L  +ME  G  P++    S   +   R  ++ SL 
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLS 619

Query: 466 ---TMVEQYCTAGL---------------IHKAYKILMQLAESGNLPDIITYNSLINGFC 507
               MV + C A +               + +A  +  ++ E G  P +  Y +L++   
Sbjct: 620 LFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV 679

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K   I+ AL++F ELQ   L PD+  Y  ++NGL + +R ++A ++   M      P   
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEM 626
            Y SL+    +  +   AF+++ +   +    D  +  S+ + L K G++ +A+     M
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM 799

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF--SVLVECKAIVTPPSCV--KLIHGLCK 682
             K     +  Y+  +  L ++G+V+EA   F  S+   C    TP   V   LI    K
Sbjct: 800 AKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC----TPNVGVYSSLIDSFGK 855

Query: 683 RGYLDLAMDVF 693
           +G +D A+++F
Sbjct: 856 KGMVDRALELF 866



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 254/487 (52%), Gaps = 20/487 (4%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  L+ G  K G  ++A+    +M++  C+P V  Y++++   +++     +L+++ EM
Sbjct: 565  TYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM 624

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            V+  C+ ++ T+SL+IN L KS   + A+ +   M + G+ P    Y  ++S L +  + 
Sbjct: 625  VRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKI 684

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D A ++F ++++S   PD   YN ++NG  K  RVDEA  L+ S +    +P L +Y+ L
Sbjct: 685  DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +DGL ++ R +EA+  + KM EE  EPDVV Y  ++  L + GK+  A+ +   M ++  
Sbjct: 745  LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            VPD   Y++LI      G +++A         +   PN   ++ LI    + GMVD A +
Sbjct: 805  VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALE 864

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRV 458
            LF +M++  C P++  +N L+ GL KAG L  A  L  +ME +G  P             
Sbjct: 865  LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVP------------- 911

Query: 459  HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
             D  +   +++     G++ +A     ++ E G +PD+IT+ SLI    KV  +  A +L
Sbjct: 912  -DLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACEL 970

Query: 519  FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP---SPAVYKSLMTW 575
            F  ++ +G  P  VTY  LI+ L R  +  +A  IF +M   GC P   +  + K ++  
Sbjct: 971  FDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL-- 1028

Query: 576  SCRRRKF 582
            S R ++F
Sbjct: 1029 SVREQQF 1035



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 252/486 (51%), Gaps = 13/486 (2%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  L+S +   G  ++A++    MK+ +C P V  Y  +++   +      A+++  EM
Sbjct: 530  TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             K  C P++VT+S L+    K  + E ++ + DEM ++G + +  TY++VI+ LC+ +  
Sbjct: 590  EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D+A  +F +MK+ G  P    Y  LL+   K  ++D AL +    ++   VP    Y+ +
Sbjct: 650  DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            ++GL ++ R DEA      M  + I PD+  Y  ++ GL ++G++++A  + + M E G 
Sbjct: 710  VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH 769

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             PD   Y +L+      G L  A  +   + K+  +P+  T++ LI  + + G V++A  
Sbjct: 770  EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYY 829

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             F      GC P+VG++++LID   K G +++A  LF +M+  + P              
Sbjct: 830  FFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPP------------- 876

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            +  +   ++     AG ++ A K+L ++ + G +PD++TYN LI+G  K+G ++ A   F
Sbjct: 877  NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYF 936

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            K ++ KG+ PD +T+ +LI  L +VD+  +A  +F  M + G  PS   Y  L+    R 
Sbjct: 937  KRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRA 996

Query: 580  RKFSLA 585
             K   A
Sbjct: 997  GKVHEA 1002



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 235/439 (53%), Gaps = 17/439 (3%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
            S  + S++++   K +  +      DE+ R G V+ VS  + ++I+   K  D ++AL+ 
Sbjct: 597  SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS-TYSLVINCLCKSDDVDQALDV 655

Query: 121  FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            FG+MKE   +P +  Y  +L+   + +    AL ++ E+ + + +P+   +++++NGL K
Sbjct: 656  FGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVK 715

Query: 181  SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            S + + A K++D M  + ILP+ FTYT ++ GL +  R +EA+ +F KM + G  PD VA
Sbjct: 716  SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775

Query: 241  YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
            Y +L++   K  ++  AL + R+  K   VP + +YS LID L +  R +EAY ++    
Sbjct: 776  YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835

Query: 301  EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
             +   P+V +Y  +I    + G V  A++L  +M+ R   P+   YN L+ G    G L+
Sbjct: 836  SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895

Query: 361  QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
             A  L  E+ K   +P+  T+ ILI G+ + GMVD+A+  F +M++ G  P V  F +LI
Sbjct: 896  VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLI 955

Query: 421  DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            + L K  +L +A  LF  M E G NP++               +   +++    AG +H+
Sbjct: 956  ESLGKVDKLLEACELFDSMEEEGYNPSV--------------VTYNVLIDILGRAGKVHE 1001

Query: 480  AYKILMQLAESGNLPDIIT 498
            A  I  ++   G +PD IT
Sbjct: 1002 AAMIFHEMKVKGCMPDGIT 1020



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 253/505 (50%), Gaps = 44/505 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++IS   K G   +A + F  +KE    PDV+ YN ++++  +       LA+  EM
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488

Query: 160 VKLN--CL----------------------PNI-------VTFSLLINGLSKSGKTEVAI 188
           V+    C+                      P++       +T++ L++    +G  + A+
Sbjct: 489 VEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAV 548

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L+ M +   +P   TYT ++ GL +  R DEA  L  +M+  GC P  V Y++L+  F
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K  + +E+L+L     + G V  + +YS +I+ L ++   D+A   + +M EE +EP +
Sbjct: 609 YKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL 668

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  ++  L +  K+  A+++ ++++E  +VPDT+ YN ++ G      +D+A  L   
Sbjct: 669 GNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS 728

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  ++ LP+  T+T L+ G+ ++G +++A  +F KM + G  P V  + +L+D L K G+
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           L  A ++F  M   +              V D  +  ++++     G + +AY       
Sbjct: 789 LSHALIIFRAMAKKRC-------------VPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  P++  Y+SLI+ F K G ++ AL+LF+E+Q +   P+ VTY  L++GL +  R  
Sbjct: 836 SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLM 573
            A ++  +M + GC P    Y  L+
Sbjct: 896 VAEKLLEEMEKVGCVPDLVTYNILI 920



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 174/761 (22%), Positives = 328/761 (43%), Gaps = 91/761 (11%)

Query: 18   IEPALEPLLPFLSK---------TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSA 68
            ++PA EP+   +           T +   ++K+ N     +FF      +   +  + + 
Sbjct: 303  LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362

Query: 69   VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
            +++ L K    +   +   E++  N S  +  +  LI G  K G+ + A   F +MK+  
Sbjct: 363  LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422

Query: 129  CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
              P++  YN ++++  +      A  +++++ +   +P++ T++ LI+ L K G+ +  +
Sbjct: 423  LVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVL 482

Query: 189  KMLDEMTQRG---ILP----------------------------NKFTYTIVISGLCQIN 217
             ++ EM ++G   I+                              + TY  ++S      
Sbjct: 483  AIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNG 542

Query: 218  RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              DEA +L   MK   C P  V Y  L++G  K  R+DEA++LLR  EK G  P + +YS
Sbjct: 543  HVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYS 602

Query: 278  CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
             L+   ++  + +E+ + + +M  +    DV  Y ++I  L ++  V  A+ +   M+E 
Sbjct: 603  SLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662

Query: 338  GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            G+ P    Y  L+        +D A  +  E+ +   +P+T  + I++ G+ ++  VD+A
Sbjct: 663  GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722

Query: 398  QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
             KL + M+     P +  + +L+DGL K+G LE+A  +F KM E G  P           
Sbjct: 723  CKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP----------- 771

Query: 457  RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
               D  +  ++++     G +  A  I   +A+   +PD++TY+SLI+   K G +  A 
Sbjct: 772  ---DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 517  KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
              F+    KG  P+   Y +LI+   +    + A  +F +M +  C P+   Y +L++  
Sbjct: 829  YFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGL 888

Query: 577  CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             +                  +GR + + K +EE  + G V +                L 
Sbjct: 889  AK------------------AGRLNVAEKLLEEMEKVGCVPD----------------LV 914

Query: 637  PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
             Y I + G+ + G V EA + F  + E   +    +   LI  L K   L  A ++F   
Sbjct: 915  TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM 974

Query: 697  LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
             + G+   P V  Y +   +  +  K   A  +   MK  G
Sbjct: 975  EEEGY--NPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKG 1013



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 187/369 (50%), Gaps = 8/369 (2%)

Query: 19   EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL---RSFASNSAVISMLLK 75
            E  +EPLL    KT ++S++   K+ ++ F   I+   ++      +F  N  +++ L+K
Sbjct: 661  EEGMEPLLGNY-KTLLSSLV---KDEKIDFALQIFNELQESSLVPDTFVYN-IMVNGLVK 715

Query: 76   PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
             N  D   + +D +++ N+      +  L+ G  K G  E+A   F KM E   +PDV  
Sbjct: 716  SNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775

Query: 136  YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
            Y +++++  +      AL ++  M K  C+P++VT+S LI+ L K G+ E A    +   
Sbjct: 776  YTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSI 835

Query: 196  QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             +G  PN   Y+ +I    +    D A  LF +M+   C P+ V YN LL+G  K  R++
Sbjct: 836  SKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLN 895

Query: 256  EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
             A  LL   EK G VP L +Y+ LIDG+ +    DEA +++++M E+ I PDV+ +  +I
Sbjct: 896  VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLI 955

Query: 316  RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
              L +  K+ +A +L   M E G  P    YN LI      G + +A  +  E+  +  +
Sbjct: 956  ESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCM 1015

Query: 376  PNTHTFTIL 384
            P+  T  I+
Sbjct: 1016 PDGITIGIM 1024



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 96   VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            +V DV  F  LI    KV    +A E F  M+E    P V  YN +++I  R      A 
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 154  AVYYEMVKLNCLPNIVTFSLLINGLS 179
             +++EM    C+P+ +T  ++   LS
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIMKRILS 1029


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 183/668 (27%), Positives = 310/668 (46%), Gaps = 58/668 (8%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVS 98
           +     R F  A+K+    +F+   A+   +L    +   FD   + L+++++    + +
Sbjct: 62  DDSAALRLFNLASKKP---NFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGT 118

Query: 99  DVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
             F +LI  Y +    ++ L     M  +F  +PD + YN +LN+        L    + 
Sbjct: 119 SPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M      P++ TF++LI  L ++ +   AI ML++M   G++P++ T+T ++ G  +  
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             D A R+  +M + GCS   V+ N +++GFCK  RV++AL  ++               
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ---------- 288

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
              DG F                     PD   +  ++ GL +AG VK A++++  M + 
Sbjct: 289 ---DGFF---------------------PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  PD Y YN++I G C LG + +A     ++  RD  PNT T+  LI  +C+   V++A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +L   +   G  P V  FN+LI GLC       A  LF +M            S+G   
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR-----------SKGCE- 432

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +   +++  C+ G + +A  +L Q+  SG    +ITYN+LI+GFCK   I  A +
Sbjct: 433 -PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +F E+++ G+  +SVTY TLI+GL +  R EDA ++  QM   G  P    Y SL+T  C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFC 551

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           R      A  +      +    D  +  + I    + G VE A + L  +  K       
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPH 611

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCK-RGYLDLAMDVFL 694
            Y   + GL +  +  EA+N+F  ++E           +++  GLC   G +  A+D  +
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671

Query: 695 YTLKNGFI 702
             L+ GF+
Sbjct: 672 ELLEKGFV 679



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/589 (24%), Positives = 266/589 (45%), Gaps = 34/589 (5%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           L++ L        A+++ +  +++    P    Y  ++  L +    D+  ++   MK+S
Sbjct: 53  LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDE 291
           GC      +  L+  + +    DE L ++     D G  P    Y+ +++ L        
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               + KM    I+PDV  + V+I+ L  A +++ A+ +L DM   G+VPD   +  +++
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME-KAGCF 410
           G+ + G LD A  ++ ++ +     +  +  +++ G C+ G V+DA     +M  + G F
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 411 PSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFL---------RLSQGGNRVH- 459
           P    FN L++GLCKAG ++ A  ++   ++ G +P ++          +L +    V  
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 460 -----------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                      +  +  T++   C    + +A ++   L   G LPD+ T+NSLI G C 
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             N   A++LF+E++ KG  PD  TY  LI+ L    + ++A  +  QM  +GC  S   
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMD 627
           Y +L+   C+  K   A  ++ +       R+  +  ++ + L K   VE+A Q + +M 
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKA-IVTPPSCVKLIHGLCKRG 684
            +        Y   L   C+ G +K+A +I   +    C+  IVT  +   LI GLCK G
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT---LISGLCKAG 589

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            +++A  +       G  L P   N +++ L   +  K   A +L   M
Sbjct: 590 RVEVASKLLRSIQMKGIALTPHAYNPVIQGLF--RKRKTTEAINLFREM 636



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           NS +  + L  N   +  +  +E+RS         + +LI      G  ++AL    +M+
Sbjct: 404 NSLIQGLCLTRN-HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
              C   V  YN +++   +      A  ++ EM       N VT++ LI+GL KS + E
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A +++D+M   G  P+KFTY  +++  C+     +A  +   M  +GC PD V Y  L+
Sbjct: 523 DASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KI 304
           +G CK  RV+ A  LLRS +  G      +Y+ +I GLFR ++  EA   +R+M E+ + 
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642

Query: 305 EPDVVLYGVMIRGL-SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
            PD V Y ++ RGL +  G +++A+  L ++ E+G VP+      L +G   L +
Sbjct: 643 APDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM 697



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 205/516 (39%), Gaps = 94/516 (18%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER---------------------------- 337
           P+  LY  ++  L  +G   D  K+L DM+                              
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 338 --------GIVPDTYCYNALIKGFCD---LGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
                   G+ PDT+ YN ++    D   L L++ A + ++ +W     P+  TF +LI 
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA-KMSVWGIK--PDVSTFNVLIK 197

Query: 387 GMCR-----------------------------------NGMVDDAQKLFNKMEKAGCFP 411
            +CR                                    G +D A ++  +M + GC  
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           S    N ++ G CK G +E A  L +  E+      F           D+ +  T+V   
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDA--LNFIQEMSNQDGFF----------PDQYTFNTLVNGL 305

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C AG +  A +I+  + + G  PD+ TYNS+I+G CK+G +  A++   ++  +   P++
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VTY TLI+ L + ++ E+A  +   +   G  P    + SL+   C  R   +A  L+ +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF-E 424

Query: 592 YLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
            +R      DE   +  I+    KG+++ A+  L +M+       +  Y   + G C+  
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           +++EA  IF  +          +   LI GLCK   ++ A  +    +  G        N
Sbjct: 485 KIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYN 544

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            LL       D KK  A  ++  M S G + D   Y
Sbjct: 545 SLLTHFCRGGDIKK--AADIVQAMTSNGCEPDIVTY 578



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 123/276 (44%), Gaps = 10/276 (3%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I    K N      +  DE+    VS  S  +  LI G  K    E A + 
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M     +PD + YN++L    R      A  +   M    C P+IVT+  LI+GL K
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFV 239
           +G+ EVA K+L  +  +GI      Y  VI GL +  +  EA  LF +M + +  +PD V
Sbjct: 588 AGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAV 647

Query: 240 AYNALLNGFCK-LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           +Y  +  G C     + EA+  L    + GFVP   S   L +GL      +E       
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLS-MEETLVKLVN 706

Query: 299 MFEEKI---EPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           M  +K    E +V     M++GL +  K +DA+  L
Sbjct: 707 MVMQKARFSEEEV----SMVKGLLKIRKFQDALATL 738


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 188/681 (27%), Positives = 320/681 (46%), Gaps = 52/681 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+ S  VS+ +  + +LI G  K  + + A     +M         Y+Y+  + +  +
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + +   A A++  M+    +P    ++ LI G  +        ++L EM +R I+ + +T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  V+ G+C     D AY +  +M  SGC P+ V Y  L+  F +  R  +A+ +L+  +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P +  Y+ LI GL +AKR DEA ++  +M E  ++P+   YG  I G  EA +  
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A K + +MRE G++P+      LI  +C    + +A S    +  +  L +  T+T+L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G+ +N  VDDA+++F +M   G  P V  +  LI+G  K G ++KA+ +F +M E G  
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P + +                 ++  +C +G I KA ++L +++  G  P+ +TY ++I+
Sbjct: 660 PNVII--------------YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+CK G++  A +LF E++LKGL PDS  Y TL++G  R++  E A  IFG   + GC  
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCAS 764

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI-QGL 623
           S A + +L+ W  +  K  L                            K EV N +  G 
Sbjct: 765 STAPFNALINWVFKFGKTEL----------------------------KTEVLNRLMDGS 796

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            +   K ND     Y I +  LC++G ++ A  +F  +     + T  +   L++G  K 
Sbjct: 797 FDRFGKPND---VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           G       VF   +  G  + P    Y +    F K+     A  L+ +M +     D C
Sbjct: 854 GRRAEMFPVFDEAIAAG--IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911

Query: 744 LYPKT--KSLLPGPWNTREME 762
               +  ++LL G     EME
Sbjct: 912 KLSISTCRALLSGFAKVGEME 932



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 59/542 (10%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           + KN + G+   +   KR  + S  +   V+  +      D  +  + E+ +        
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI  + +      A+    +MKE    PD++ YN+                     
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS--------------------- 492

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                         LI GLSK+ + + A   L EM + G+ PN FTY   ISG  + +  
Sbjct: 493 --------------LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A +   +M++ G  P+ V    L+N +CK  +V EA +  RS    G +    +Y+ L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GLF+  + D+A   +R+M  + I PDV  YGV+I G S+ G ++ A  +  +M E G+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN L+ GFC  G +++A+ L  E+  +   PN  T+  +I G C++G + +A +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR-- 457
           LF++M+  G  P   ++  L+DG C+  ++E+A  +F                 G N+  
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-----------------GTNKKG 761

Query: 458 -VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG----NLPDIITYNSLINGFCKVGNI 512
                A    ++      G      ++L +L +        P+ +TYN +I+  CK GN+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +LF ++Q   L P  +TY +L+NG  ++ R  + F +F +    G  P   +Y  +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 573 MT 574
           + 
Sbjct: 882 IN 883



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 152/637 (23%), Positives = 265/637 (41%), Gaps = 96/637 (15%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           +FS L   L   G  E A+ +++ M +R     +   +IV        R  + +      
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIV--------RCSQEF------ 144

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G S D V +  L +G+     ++EA+ +  S      VPRL     L+D L R  R 
Sbjct: 145 --VGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK---------------------DAM 328
           D  +  Y+ M E  +  DV  Y ++I     AG V+                      A+
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL---- 384
           KL   M  +G+VP  Y Y+ LI G C +  L+ A+SL VE+       + HT+++L    
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 385 -------------------------------ICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                                          IC M + G+++ A+ LF+ M  +G  P  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             + +LI+G C+   + +   L  +M             +  N V    +  T+V+  C+
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEM-------------KKRNIVISPYTYGTVVKGMCS 429

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +  AY I+ ++  SG  P+++ Y +LI  F +      A+++ KE++ +G+ PD   
Sbjct: 430 SGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y +LI GL +  R ++A     +M +NG  P+   Y + ++      +F+ A   +++ +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYVKEM 548

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           R+     ++ + +  I E+ +K +V  A      M  +        YT+ + GL ++ +V
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608

Query: 652 KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            +A  IF    E +     P       LI+G  K G +  A  +F   ++ G  L P V 
Sbjct: 609 DDAEEIFR---EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG--LTPNVI 663

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            Y +    F +  +   A  LL  M   G   +A  Y
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 182/664 (27%), Positives = 308/664 (46%), Gaps = 72/664 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V+ Y  ++    R     L  A    +VK     + +TF+ L+ GL    +T  A+ +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 191 -LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD---SGCSPDFVAYNALLN 246
            L  MT+ G +P+ F+Y  ++ GLC  NR+ EA  L   M D    G  PD V+YN +LN
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 247 GF-----------------------------------CKLRRVDEALALLRSFEKDGFVP 271
           GF                                   CK + +D+A+ +L +  K+G +P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ ++ G   + +  EA    +KM  + +EP+VV Y  ++  L + G+  +A K+ 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y  L++G+   G L +  +L   + +    P+ H F ILIC   + 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             VD A  +F+KM + G  P+V  +  +ID LCK+G ++ A L F +M + G  P + + 
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 451 LSQGGNRVH--------DKAS-----------------LQTMVEQYCTAGLIHKAYKILM 485
            S     +H        DKA                    ++++ +C  G + ++ K+  
Sbjct: 450 TSL----IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  PDIITYN+LI+G C  G ++ A KL   +   G++PD VTYGTLING  RV 
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G +P+   Y  ++      R+ + A  L++   +  +  +  +  
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT--IWLIGLCQDGQVKEALNIFSVLVE 663
            I   L K  + +    + + +  L D QL   T  I +  L + G++ EA ++F+    
Sbjct: 626 IILHGLCKNNLTDEALRMFQ-NLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              +    +   +   L ++G L+   D+FL   +NG     R+ N ++R LL   D  +
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 744

Query: 724 VHAY 727
              Y
Sbjct: 745 AGTY 748



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 245/557 (43%), Gaps = 13/557 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K  +    +  +     R  L    + S++I+ L K    D   + L+ 
Sbjct: 202 VSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNT 261

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+ +  KM+    +P+V  Y++++N   +   
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P+I T+  L+ G +  G       +LD M + GI P+   + I
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +P+ V Y  +++  CK   VD+A+        +G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ LI GL    ++D+A     +M +  I  + + +  +I    + G+V ++ 
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   YN LI G C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           CR   +DDA  LF +M  +G  P++  +N ++ G            LF+         L+
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQG------------LFHTRRTAAAKELY 609

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 610 VSITKSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 668

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ A  LF      GL PD  TY  +   L      E+   +F  M +NGC+    +
Sbjct: 669 CGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM 728

Query: 569 YKSLMTWSCRRRKFSLA 585
             S++    +R   + A
Sbjct: 729 LNSIVRKLLQRGDITRA 745



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 270/595 (45%), Gaps = 41/595 (6%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P    Y
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    PDV  Y  +++GL +  + ++A++LL   +D R  G  PD   YN ++ GF   G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R  LP+  T++ +I  +C+   +D A ++ N M K G  P    +N
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVH----------- 459
           +++ G C +G+ ++A     KM   G  P      +L   L + G               
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 460 ----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+ +T+++ Y T G + + + +L  +  +G  PD   +N LI  + K   ++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++  GL P+ V YGT+I+ L +    +DA   F QM   G TP+  VY SL+  
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DF 633
            C   K+  A  L L+ L R I          I+   ++G V  + + L ++  ++    
Sbjct: 456 LCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKP 514

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
            +  Y   + G C  G++ EA  + + +V   ++   P  V    LI+G C+   +D A+
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMV---SVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +F   + +G        N +L+ L  ++  +   A  L   +   G  L+   Y
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTR--RTAAAKELYVSITKSGTQLELSTY 624



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 53/226 (23%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +V V  D+  +  LI+GY +V   + AL  F +M      P++  YN +L   F  +   
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM-------------------- 190
            A  +Y  + K      + T++++++GL K+  T+ A++M                    
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 191 --------LDEM-------TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
                   +DE        +  G++P+  TY+++   L +    +E   LFL M+++GCS
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            D    + +LN            +++R   + G + R G+Y  +ID
Sbjct: 724 AD----SRMLN------------SIVRKLLQRGDITRAGTYLFMID 753


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 171/608 (28%), Positives = 283/608 (46%), Gaps = 47/608 (7%)

Query: 113 DCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           D  +A   F KM KE +C+P+   Y+ +++          A  +  EMV+  C P+  T+
Sbjct: 221 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 280

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI      G T+ A+KMLDEM  +  +PN  TYTI+I  LC+  + +EA  +F KM  
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  P  + +NAL+NG+CK   V  A  LL   EK    P + +Y+ L++GL R  +  +
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+   R++ +  + PD V Y +++ G  + G++  A  + + M   G+ PD + + ALI 
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C LG L+QA  +   + K+    +  TFT LI G C+ G   D   LF  M +  C  
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   FN  +D L K  +L +AN +  K M+ G  P++               +   ++E 
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV--------------VTHTILIEG 566

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C AG    + K+L ++ ++G  P++ TY  +ING C  G +  A  +   +   G+ P+
Sbjct: 567 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 626

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
             TY  L+    +  R + AF+I   M +NGC P+  +Y +L++            S   
Sbjct: 627 HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS--------GFVLSNTA 678

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA-------------- 636
              R +S   D   +S+         EN    L    F+L D   A              
Sbjct: 679 IGARALSSTGDLDARSLS------SEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPT 732

Query: 637 --PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y   ++GLC++G++ EA  +   +V+   +    +   +I   CK    D  ++   
Sbjct: 733 EDLYNFLVVGLCKEGRIIEADQLTQDMVK-HGLFPDKAISSIIEHYCKTCKYDNCLEFMK 791

Query: 695 YTLKNGFI 702
             L N F+
Sbjct: 792 LVLDNKFV 799



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 299/634 (47%), Gaps = 26/634 (4%)

Query: 47  GFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
            FR F   +K +  R +  + S +I  L +    +  +Q   E+        +  + VLI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
                +G  +KA++   +M    C P+V+ Y  +++   R+     A  V+ +M+K    
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 344

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P I+TF+ LING  K G    A ++L  M +    PN  TY  ++ GLC+++++ +A+ L
Sbjct: 345 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 404

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             ++ D+G  PD V YN L++GFCK  +++ A  +  S    G  P   +++ LIDGL +
Sbjct: 405 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 464

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R ++A      M ++ I  D V +  +I G  + GK KD   L  +M E   +   + 
Sbjct: 465 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 524

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N  +        L++A ++  ++ K   +P+  T TILI G CR G    + K+  +M+
Sbjct: 525 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           +AGC P+V  +  +I+GLC  G +E+A  + + M   G +P  F              + 
Sbjct: 585 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF--------------TY 630

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK--EL 522
             +V+ +  AG + +A++I+  + ++G  P+   Y++L++GF       GA  L    +L
Sbjct: 631 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL 690

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             + L  +      L + + R+   + A +I  ++ + G  P+  +Y  L+   C+  + 
Sbjct: 691 DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRI 749

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL-LEMDFKLNDFQLAPYTIW 641
             A  L    ++     D      IE + +  + +N ++ + L +D K      A Y   
Sbjct: 750 IEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP-SFASYCWV 808

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAI-----VTP 670
           + GL  +G+V+EA  + S LV    I     VTP
Sbjct: 809 IHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 842



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 208/493 (42%), Gaps = 56/493 (11%)

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG  KL      +  L    + GF      YS L+  L +      A+  YR+M  E   
Sbjct: 115 NGVVKL------MGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFV 168

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
              + Y  ++  L + G V+ A      +   G   DT+   +L+   C    L +A  +
Sbjct: 169 LGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRV 228

Query: 366 QVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
             ++ K ++  PN+ T++ILI G+C  G +++A +L  +M + GC PS   +  LI   C
Sbjct: 229 FEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC 288

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
             G  +KA  +  +M                  V +  +   ++++ C  G I +A  + 
Sbjct: 289 DIGMTDKAMKMLDEMATKAC-------------VPNVHTYTILIDRLCREGKIEEANGVF 335

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G  P IIT+N+LING+CK G +  A +L   ++    +P+  TY  L+ GL RV
Sbjct: 336 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 395

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +   AF +  ++  NG  P    Y  L+   C+  + ++AF+++             SM
Sbjct: 396 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF------------NSM 443

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
            S               GL    F         +T  + GLC+ G++++A  I   +V+ 
Sbjct: 444 NS--------------AGLEPDGF--------TFTALIDGLCKLGRLEQANGILGSMVKK 481

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              +   +   LI G CK G       +F   ++N  +      N  L +L   KD K  
Sbjct: 482 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL--GKDYKLN 539

Query: 725 HAYHLLCRMKSVG 737
            A  +L +M   G
Sbjct: 540 EANAMLGKMMKYG 552



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 168/390 (43%), Gaps = 22/390 (5%)

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           SE G VK  M  L  M E G      CY+ L+     L +   A  +   +     +   
Sbjct: 113 SENGVVK-LMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGG 171

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  ++  +C+NG V  A+    K+ + G      +  +L+   C+  +L +A  +F K
Sbjct: 172 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 231

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M            S+  N   +  +   ++   C AG + +A+++  ++ E G  P   T
Sbjct: 232 M------------SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 279

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  LI   C +G  + A+K+  E+  K   P+  TY  LI+ L R  + E+A  +F +M 
Sbjct: 280 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 339

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVE 617
           ++G  P    + +L+   C+      AF L L  +    G    ++++  E ++    V 
Sbjct: 340 KHGLCPGIITFNALINGYCKEGWVVSAFQL-LSVME--KGNCKPNIRTYNELMEGLCRVS 396

Query: 618 NAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            + +  L +  ++ D  L P    Y I + G C++GQ+  A NIF+ +          + 
Sbjct: 397 KSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 455

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
             LI GLCK G L+ A  +    +K G  L
Sbjct: 456 TALIDGLCKLGRLEQANGILGSMVKKGISL 485


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/547 (29%), Positives = 273/547 (49%), Gaps = 34/547 (6%)

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           + C P +VT++++I+G  K+ + + A+   ++M +  + PN+ TY +V++GLC+     +
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSK 59

Query: 222 AYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCL 279
           AY +  +M+D    +PD V Y+ ++NGFCK   +D A  +LR    +DG  P + +Y+ +
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSV 119

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD-MRERG 338
           +DGL R  + D A    R+M  + +EPD   +  +I G   A KV +A+KL  + +    
Sbjct: 120 VDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   Y ALI GFC  G L++A  +   +  R  +PN  T++ L+ G+C+ G +D A 
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            LF +M   GC P+V  +  LI GLC A +++ A LL  +M     P             
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP------------ 287

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  S   +++ YC  G I +A ++  ++A    LPD ITY  L+ GFC    +  A  L
Sbjct: 288 -DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFL 346

Query: 519 FKELQL-KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + ++   G+ PD VTY  ++ G  R  R  +A     +M      P+   Y SL+   C
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406

Query: 578 RRRKFSLAFSLWLQYLRD-ISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLND 632
           +  +   A    ++ L++ ++ R + S+ +    I    + G+++ A + L+ M     +
Sbjct: 407 KAGRVDHA----MEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVL-------VECKAIVTPPSCVKLIHGLCKRGY 685
             +  YT  L G  + G+++ A  +F V+            +V   +   LI GLCK   
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKARE 522

Query: 686 LDLAMDV 692
           +D AM V
Sbjct: 523 IDKAMAV 529



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 272/532 (51%), Gaps = 27/532 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           + V+++G  K     KA E   +M++     PD+  Y+ V+N   ++     A  +  EM
Sbjct: 44  YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103

Query: 160 VKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           V  + + P++VT++ +++GL + GK + A +M+ EM  +G+ P+KFT++ +I+G C   +
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163

Query: 219 ADEAYRLFLK-MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
            DEA +L+ + +  S   PD V Y AL++GFCK   +++A+ +L   E    VP + +YS
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+ GL +A   D+A   +R+M  +   P+VV Y  +I GL  A KV  A  L+ +M   
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
              PDT  YNAL+ G+C LG +++A+ L  E+  +  LP+  T+T L+ G C    +++A
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 398 QKLFNKME-KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           + L   M+  AG  P V  ++ ++ G  +A    +A     +M I +N            
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEM-IARNVA---------- 392

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              +  +  ++++  C AG +  A ++L  +      P + T+NS+I   C++G+++ A 
Sbjct: 393 --PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 450

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM--------PQNGCTPSPAV 568
           KL   +   GL P  VTY TL+ G  R  R E A+ +F  M              P  A 
Sbjct: 451 KLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA- 509

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENA 619
           + +L+   C+ R+   A ++  +   R+    +++ +  ++  L+ G  E A
Sbjct: 510 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 561



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 260/535 (48%), Gaps = 56/535 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   T+TI+I G C+ N+  +A   F KM++   +P+   YN ++NG CK R   +A  +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 261 LRSFEKDG--FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRG 317
           L+   +DG    P L +YS +I+G  +    D A    R+M   + I PDVV Y  ++ G
Sbjct: 64  LKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-P 376
           L   GK+  A +++ +M+ +G+ PD + ++ALI G+C+   +D+A  L  EI    S  P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  T+T LI G C++G ++ A K+   ME   C P+V  +++L+ GLCKAG+L++A  LF
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +M            S+G   V +  +  T++   C A  +  A  ++ ++  +   PD 
Sbjct: 243 RRM-----------TSKGC--VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDT 289

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA-FRIFG 555
           ++YN+L++G+C++G I  A +LFKE+  K   PD +TY  L+ G     R E+A F +  
Sbjct: 290 VSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 349

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
                G  P    Y  ++    R ++F                   E+ + I+E + +  
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFV------------------EAAEFIQEMIARNV 391

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             NA+                 Y+  + GLC+ G+V  A+ +   +V  +   +  +   
Sbjct: 392 APNAVT----------------YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNS 435

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           +I  LC+ G +D A  + +    +G  L P +  Y      FS+  +   AY L 
Sbjct: 436 VIGALCRLGDMDEAWKLLVAMAAHG--LEPGMVTYTTLLEGFSRTGRMEIAYELF 488



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 27/507 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKM 124
           S VI+   K    D   + L E+ + +  +  DV  +  ++ G  + G  ++A E   +M
Sbjct: 81  STVINGFCKQGEMDRACEILREMVTRD-GIAPDVVTYTSVVDGLCRDGKMDRACEMVREM 139

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGK 183
           K    +PD + ++A++      +    AL +Y E++  +   P++VT++ LI+G  KSG 
Sbjct: 140 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGN 199

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E A+KML  M  R  +PN  TY+ ++ GLC+    D+A  LF +M   GC P+ V Y  
Sbjct: 200 LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G C   +VD A  L+         P   SY+ L+DG  R  R +EA   +++M  + 
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR-ERGIVPDTYCYNALIKGFCDLGLLDQA 362
             PD + Y  ++RG   A ++++A  LL +M+   GI PD   Y+ ++ G+       +A
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
                E+  R+  PN  T++ LI G+C+ G VD A ++   M      PSVG FN++I  
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439

Query: 423 LCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LC+ G++++A  L   M   G  P +               +  T++E +   G +  AY
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMV--------------TYTTLLEGFSRTGRMEIAY 485

Query: 482 KILMQL-------AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           ++   +       + + NL     +++LI G CK   I+ A+ + +EL+ +   P     
Sbjct: 486 ELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 545

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG 561
             +++GL R  R E+A ++   + + G
Sbjct: 546 LAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 14/250 (5%)

Query: 101 FFVLISGYYKVGDCEKA---LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  L+ G+      E+A   LE+       D  PDV  Y+ V+    R + F+ A     
Sbjct: 327 YTCLVRGFCNASRLEEARFLLENMKTAAGID--PDVVTYSIVVAGYSRAKRFVEAAEFIQ 384

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM+  N  PN VT+S LI+GL K+G+ + A+++L  M  + + P+  T+  VI  LC++ 
Sbjct: 385 EMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLG 444

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD--------GF 269
             DEA++L + M   G  P  V Y  LL GF +  R++ A  L     K           
Sbjct: 445 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANL 504

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           VP   ++S LI GL +A+  D+A A   ++   + EP       ++ GL  AG+ ++A K
Sbjct: 505 VPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563

Query: 330 LLSDMRERGI 339
           L++ + + G+
Sbjct: 564 LINSISKVGL 573


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/602 (28%), Positives = 290/602 (48%), Gaps = 35/602 (5%)

Query: 113 DCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           D  +A   F KM KE  C+P+   Y+ +++          A  +  EMV+  C P+  T+
Sbjct: 178 DLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 237

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI      G T+ A+KMLDEM  +  +PN  TYTI+I  LC+  + +EA  +F KM  
Sbjct: 238 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  P  + +NAL+NG+CK   V  A  LL   EK    P + +Y+ L++GL R  +  +
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+   R++ +  + PD V Y +++ G  + G++  A  + + M   G+ PD + + ALI 
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C LG L+QA  +   + K+    +  TFT LI G C+ G   D   LF  M +  C  
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   FN  +D L K  +L +AN +  K M+ G  P++               +   ++E 
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSV--------------VTHTILIEG 523

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C AG    + K+L ++ ++G  P++ TY  +ING C  G +  A  +   +   G+ P+
Sbjct: 524 HCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPN 583

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA-FSLW 589
             TY  L+    +  R + AF+I   M +NGC P+  +Y +L++       F L+  ++ 
Sbjct: 584 HFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSG------FVLSNTAIG 637

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL---NDFQLAP------YTI 640
            + L      D  S+ S E       + + +  L+++D  L   ++ +         Y  
Sbjct: 638 ARALSSTGDLDARSLSSEEN--DNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNF 695

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            ++GLC++G++ EA  +   +V+   +    +   +I   CK    D  ++     L N 
Sbjct: 696 LVVGLCKEGRIIEADQLTQDMVK-HGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNK 754

Query: 701 FI 702
           F+
Sbjct: 755 FV 756



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 299/634 (47%), Gaps = 26/634 (4%)

Query: 47  GFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
            FR F   +K +  R +  + S +I  L +    +  +Q   E+        +  + VLI
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
                +G  +KA++   +M    C P+V+ Y  +++   R+     A  V+ +M+K    
Sbjct: 242 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 301

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P I+TF+ LING  K G    A ++L  M +    PN  TY  ++ GLC+++++ +A+ L
Sbjct: 302 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 361

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             ++ D+G  PD V YN L++GFCK  +++ A  +  S    G  P   +++ LIDGL +
Sbjct: 362 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 421

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R ++A      M ++ I  D V +  +I G  + GK KD   L  +M E   +   + 
Sbjct: 422 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 481

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N  +        L++A ++  ++ K   +P+  T TILI G CR G    + K+  +M+
Sbjct: 482 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           +AGC P+V  +  +I+GLC  G +E+A  + + M   G +P  F              + 
Sbjct: 542 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF--------------TY 587

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK--EL 522
             +V+ +  AG + +A++I+  + ++G  P+   Y++L++GF       GA  L    +L
Sbjct: 588 AVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL 647

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             + L  +      L + + R+   + A +I  ++ + G  P+  +Y  L+   C+  + 
Sbjct: 648 DARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRI 706

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL-LEMDFKLNDFQLAPYTIW 641
             A  L    ++     D      IE + +  + +N ++ + L +D K      A Y   
Sbjct: 707 IEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP-SFASYCWV 765

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAI-----VTP 670
           + GL  +G+V+EA  + S LV    I     VTP
Sbjct: 766 IHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTP 799



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 208/493 (42%), Gaps = 56/493 (11%)

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG  KL      +  L    + GF      YS L+  L +      A+  YR+M  E   
Sbjct: 72  NGVVKL------MGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFV 125

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
              + Y  ++  L + G V+ A      +   G   DT+   +L+   C    L +A  +
Sbjct: 126 LGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRV 185

Query: 366 QVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
             ++ K +S  PN+ T++ILI G+C  G +++A +L  +M + GC PS   +  LI   C
Sbjct: 186 FEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC 245

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
             G  +KA  +  +M                  V +  +   ++++ C  G I +A  + 
Sbjct: 246 DIGMTDKAMKMLDEMATKAC-------------VPNVHTYTILIDRLCREGKIEEANGVF 292

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G  P IIT+N+LING+CK G +  A +L   ++    +P+  TY  L+ GL RV
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRV 352

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +   AF +  ++  NG  P    Y  L+   C+  + ++AF+++             SM
Sbjct: 353 SKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF------------NSM 400

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
            S               GL    F         +T  + GLC+ G++++A  I   +V+ 
Sbjct: 401 NS--------------AGLEPDGF--------TFTALIDGLCKLGRLEQANGILGSMVKK 438

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              +   +   LI G CK G       +F   ++N  +      N  L +L   KD K  
Sbjct: 439 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL--GKDYKLN 496

Query: 725 HAYHLLCRMKSVG 737
            A  +L +M   G
Sbjct: 497 EANAMLGKMMKYG 509



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 168/390 (43%), Gaps = 22/390 (5%)

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           SE G VK  M  L  M E G      CY+ L+     L +   A  +   +     +   
Sbjct: 70  SENGVVK-LMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGG 128

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  ++  +C+NG V  A+    K+ + G      +  +L+   C+  +L +A  +F K
Sbjct: 129 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 188

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M            S+  +   +  +   ++   C AG + +A+++  ++ E G  P   T
Sbjct: 189 M------------SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRT 236

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  LI   C +G  + A+K+  E+  K   P+  TY  LI+ L R  + E+A  +F +M 
Sbjct: 237 YTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKML 296

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVE 617
           ++G  P    + +L+   C+      AF L L  +    G    ++++  E ++    V 
Sbjct: 297 KHGLCPGIITFNALINGYCKEGWVVSAFQL-LSVME--KGNCKPNIRTYNELMEGLCRVS 353

Query: 618 NAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            + +  L +  ++ D  L P    Y I + G C++GQ+  A NIF+ +          + 
Sbjct: 354 KSYKAFLLLR-RVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF 412

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
             LI GLCK G L+ A  +    +K G  L
Sbjct: 413 TALIDGLCKLGRLEQANGILGSMVKKGISL 442


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 193/712 (27%), Positives = 330/712 (46%), Gaps = 72/712 (10%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           GFDL    +  +R          +  LI     V + +  L  F +M+E   +  V+++ 
Sbjct: 182 GFDL----IQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFT 237

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
            V+ +  R+     AL++  EM K NCL  +IV +++ I+   K+GK ++A K   E+  
Sbjct: 238 TVIRVFAREGRLDAALSLLDEM-KSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKS 296

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G+LP+  TYT +I  LC+ NR DEA  +F +M+ +   P   AYN ++ G+    + DE
Sbjct: 297 HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDE 356

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A +LL   +  G +P + +Y+C++  L +  R  EA   + +M ++   P++  Y V+I 
Sbjct: 357 AYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLID 415

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
            L +AG+V+ A K+   M+E G+ P+    N +I   C    LD+A S+   +  +   P
Sbjct: 416 MLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSP 475

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TF  LI G+ + G VDDA +L+ +M  +   P+  ++ +LI    K G  E  + +F
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535

Query: 437 YKM-----------------------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +M                       E GK   LF  +   G  + D  S   ++     
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRG-FIPDVMSYSILIHGLVK 594

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           AG   + Y++   + E G + D   YN+ I+GFCK G +N A +L +E++ KG +P  VT
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           YG++I+GL ++DR ++A+ +F +   NG   +  +Y SL+    +               
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGK--------------- 699

Query: 594 RDISGRDDESMKSIEEFLQKGEVEN---------AIQGLLEMDFKLNDFQ---------- 634
               GR DE+   +EE +QKG   N         A+    E++  L  FQ          
Sbjct: 700 ---VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPN 756

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y+I + GLC+  +  +A   +  + +        +   +I GL K G +  A  +F 
Sbjct: 757 HITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFE 816

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL--CRMKSVGYDLDACL 744
               NG +      N ++  L +S+  + + AY +    RMK        C+
Sbjct: 817 RFKANGGVPDSASYNAIIEGLSYSR--RAMEAYKIFEETRMKGCNIHTKTCI 866



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 320/713 (44%), Gaps = 30/713 (4%)

Query: 30  SKTTVTSVI--MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           +KT +  ++  +K+   + GF       K K   +F++ + +I  L      D+      
Sbjct: 163 TKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFH 222

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +++     V   +F  +I  + + G  + AL    +MK      D+ +YN  ++   +  
Sbjct: 223 QMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAG 282

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
              +A   ++E+     LP+ VT++ +I  L K  + + A+++ ++M Q   +P  + Y 
Sbjct: 283 KVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYN 342

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G     + DEAY L  + K  GC P  +AYN +L    K  R+ EAL      +KD
Sbjct: 343 TMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKD 402

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P L +Y+ LID L +A   + A+     M E  + P+V+   +MI  L +A K+ +A
Sbjct: 403 A-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEA 461

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +   M  +   PD   + +LI G    G +D A  L  ++   D +PN   +T LI  
Sbjct: 462 CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKS 521

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME------- 440
             + G  +D  K+F +M   GC P + + NA +D + KAGE  K   LF +++       
Sbjct: 522 FFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581

Query: 441 ----------------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
                             +   LF  + + G  V D  +  T ++ +C +G ++KAY++L
Sbjct: 582 VMSYSILIHGLVKAGFARETYELFYAMKEQGC-VLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++   G  P ++TY S+I+G  K+  ++ A  LF+E +  GL  + V Y +LI+G  +V
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R ++A+ I  ++ Q G TP+   +  L+    +  + + A  +  Q ++++ G  +   
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-VCFQNMKNLKGTPNHIT 759

Query: 605 KS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            S  I    +  +   A     EM  +        YT  + GL + G + EA ++F    
Sbjct: 760 YSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFK 819

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
               +    S   +I GL        A  +F  T   G  +  + C  LL +L
Sbjct: 820 ANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 193/805 (23%), Positives = 341/805 (42%), Gaps = 101/805 (12%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS--AVISMLLK 75
           +E AL   +       V  V+ + K+      +F W  +RK  ++    +  +++ ++ K
Sbjct: 82  VENALSLFVESPKTDLVIGVLRRAKDVNQAISYFRWT-ERKTDQALCPEAYDSLLLVMAK 140

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
              FD + Q L E+        +     LI    K     +  +    M++F  +P    
Sbjct: 141 NVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSA 200

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y  ++      Q   + L ++++M +L    ++  F+ +I   ++ G+ + A+ +LDEM 
Sbjct: 201 YTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMK 260

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
              +  +   Y + I    +  + D A++ F ++K  G  PD V Y +++   CK  R+D
Sbjct: 261 SNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLD 320

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM---------------- 299
           EA+ +    E++  VP   +Y+ +I G   A ++DEAY+   +                 
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCIL 380

Query: 300 ---------------FEE---KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
                          FEE      P++  Y V+I  L +AG+V+ A K+   M+E G+ P
Sbjct: 381 TCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFP 440

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +    N +I   C    LD+A S+   +  +   P+  TF  LI G+ + G VDDA +L+
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---------------------- 439
            +M  +   P+  ++ +LI    K G  E  + +F +M                      
Sbjct: 501 EQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            E GK   LF  +   G  + D  S   ++     AG   + Y++   + E G + D   
Sbjct: 561 GETGKGRALFEEIKSRG-FIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHA 619

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN+ I+GFCK G +N A +L +E++ KG +P  VTYG++I+GL ++DR ++A+ +F +  
Sbjct: 620 YNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 679

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
            NG   +  +Y SL+    +                   GR DE+   +EE +QKG   N
Sbjct: 680 SNGLELNVVIYSSLIDGFGK------------------VGRIDEAYLIMEELMQKGLTPN 721

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                           +  +   L  L +  ++ EAL  F  +   K      +   LI+
Sbjct: 722 ----------------VYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILIN 765

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           GLC+    + A   +    K G  L+P    Y       +K      A  L  R K+ G 
Sbjct: 766 GLCRVRKFNKAFVFWQEMQKQG--LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGG 823

Query: 739 DLDACLYPKTKSLLPG-PWNTREME 762
             D+  Y    +++ G  ++ R ME
Sbjct: 824 VPDSASY---NAIIEGLSYSRRAME 845



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 2/299 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I  L+K       ++    ++     + +  +   I G+ K G   KA +   +M
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGK 183
           K    QP V  Y +V++    K   L    + +E  K N L  N+V +S LI+G  K G+
Sbjct: 644 KTKGRQPTVVTYGSVID-GLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A  +++E+ Q+G+ PN +T+  ++  L +    +EA   F  MK+   +P+ + Y+ 
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+NG C++R+ ++A    +  +K G  P   +Y+ +I GL +A    EA + + +     
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             PD   Y  +I GLS + +  +A K+  + R +G    T    AL+        L+QA
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 38/254 (14%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           + R  +  +  +VI  L K +  D  +   +E +S  + +   ++  LI G+ KVG  ++
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDE 705

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A     ++ +    P+VY +N +L+   + +    AL  +  M  L   PN +T+S+LIN
Sbjct: 706 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILIN 765

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN------------------- 217
           GL +  K   A     EM ++G+ PN  TYT +I+GL +                     
Sbjct: 766 GLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVP 825

Query: 218 ----------------RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL--- 258
                           RA EAY++F + +  GC+       ALL+   K   +++A    
Sbjct: 826 DSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVG 885

Query: 259 ALLRSFEKDGFVPR 272
           A+LR   K     R
Sbjct: 886 AVLREIAKSQHAAR 899


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 262/524 (50%), Gaps = 16/524 (3%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            K +   S    + ++S + K N F+L     +++++  +S     + + I+ + +    
Sbjct: 75  VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL    KM +   +PD+   +++LN     +    A+A+  +MV++   P+  TF+ L
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTL 194

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL    K   A+ ++D+M QRG  P+  TY  V++GLC+    D A  L  KM+ +  
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             + V +N +++  CK R V+ A+ L    E  G  P + +Y+ LI+ L    R+ +A  
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M E+KI P+VV +  +I    + GK+ +A KL  +M +R I PDT  YN LI GFC
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               LD+A+ +   +  +D LPN  T+  LI G C+   V+D  +LF +M + G   +  
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  +I G  +AG+ + A ++F +M   + PT             D  +   ++   C+ 
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT-------------DIMTYSILLHGLCSY 481

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A  I   L +S    +I  YN++I G CK G +  A  LF  L +K   PD VTY
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            T+I+GL      ++A  +F +M ++G  P+   Y +L+  + R
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/592 (28%), Positives = 284/592 (47%), Gaps = 54/592 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV F+ L++ ++K  K E+ I + ++M   GI  + +TY+I I+
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  PD V  ++LLNG+C  +R+ +A+AL+    + G+ P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA A   +M +   +PD+V YG ++ GL + G +  A+ LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M    I  +   +N +I   C    ++ A  L  E+  +   PN  T+  LI  +C  
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   DA +L + M +    P+V  FNALID   K G+L +A  L  +M +   +P     
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP----- 361

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   ++  +C    + +A ++   +     LP+I TYN+LINGFCK  
Sbjct: 362 ---------DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +   ++LF+E+  +GL  ++VTY T+I G  +    + A  +F QM  N        Y 
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C   K   A  ++                   ++LQK E+E            L
Sbjct: 473 ILLHGLCSYGKLDTALVIF-------------------KYLQKSEME------------L 501

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           N F    Y   + G+C+ G+V EA ++F  L     +VT  +   +I GLC +  L  A 
Sbjct: 502 NIF---IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT---MISGLCSKRLLQEAD 555

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           D+F    ++G +      N L+R+ L  +D  +  +  L+  M+S G+  DA
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANL--RDCDRAASAELIKEMRSSGFVGDA 605



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 237/505 (46%), Gaps = 21/505 (4%)

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+ + L  I + D+A  LF  M  S   P  V +N LL+   K+ + +  ++L    +  
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G    L +YS  I+   R  +   A A   KM +   EPD+V    ++ G   + ++ DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           + L+  M E G  PDT+ +  LI G        +A +L  ++ +R   P+  T+  ++ G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPT 446
           +C+ G +D A  L NKME A    +V +FN +ID LCK   +E A  LF +ME  G  P 
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  +++   C  G    A ++L  + E    P+++T+N+LI+ F
Sbjct: 293 V--------------VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K G +  A KL +E+  + + PD++TY  LING    +R ++A ++F  M    C P+ 
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
             Y +L+   C+ ++      L+ +   R + G        I+ F Q G+ ++A     +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           M        +  Y+I L GLC  G++  AL IF  L + +  +       +I G+CK G 
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNY 710
           +  A D+F         ++P V  Y
Sbjct: 519 VGEAWDLFC-----SLSIKPDVVTY 538



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 4/331 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+     G    A      M E    P+V  +NA+++  F++   + A  ++ EM++ +
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ +T++LLING     + + A +M   M  +  LPN  TY  +I+G C+  R ++  
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M   G   + V Y  ++ GF +    D A  + +    +     + +YS L+ GL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               + D A   ++ + + ++E ++ +Y  MI G+ +AGKV +A  L   +    I PD 
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDV 535

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN +I G C   LL +A  L  ++ +  +LPN+ T+  LI    R+     + +L  +
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKE 595

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           M  +G F       +L+  +   G L+K+ L
Sbjct: 596 MRSSG-FVGDASTISLVTNMLHDGRLDKSFL 625


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 225/424 (53%), Gaps = 13/424 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
             +V  +++KL   PN++TFS LING    GK   AI++ D M  RG  PN  +Y+I+I 
Sbjct: 145 GFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIK 204

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC++ +  E  +L   MK  GC PD V YN +++  CK R V+EA+ +    +  G +P
Sbjct: 205 GLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LI GL    R+ EA+    +M    I PD+V + V+I  + + G+V +A  +L
Sbjct: 265 TVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M E G+ PD   YN L+ G+C    + +AR +   +  +  +P+  +F+IL+ G C+ 
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A++LF++M   G  P    +N LI GLC+A    +A  LF  M     P      
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP----- 439

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N V     L  + +Q    G + +A  +   +  SG  PD++TYN +I+G CK G 
Sbjct: 440 ----NLVTYSILLDCLSKQ----GYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A +LF EL +KGL+P++      I+G+ +    ++A + F QM ++ C+P+      
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551

Query: 572 LMTW 575
             T+
Sbjct: 552 RATY 555



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 215/440 (48%), Gaps = 13/440 (2%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL+ +  MV  N LP+IV F  L + L +    +  + +  +M   GI  +  + TI+I+
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C++   D  + +  K+   G  P+ + ++ L+NGFC   ++  A+ L       G+ P
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP 194

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + SYS +I GL R  +  E       M     EPDVV+Y  ++  L +   V +A+ + 
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M+  GI+P    Y +LI G  +LG   +A  L  E+   + +P+   F++LI  MC+ 
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKE 314

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G V +A+ +   M + G  P V  +N L++G C   E+ +A  +F  M           +
Sbjct: 315 GEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVM-----------I 363

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+G  R+ D  S   +V  YC A  I +A ++  ++   G +PD ++YN+LI+G C+   
Sbjct: 364 SKG--RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A +LFK++   G  P+ VTY  L++ L +    + A  +F  M  +G  P    Y  
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481

Query: 572 LMTWSCRRRKFSLAFSLWLQ 591
           ++   C+  KF  A  L+ +
Sbjct: 482 MIDGMCKYGKFKDARELFAE 501



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 179/340 (52%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  +VG   + ++    MK   C+PDV IYN +++   + +L   A+ ++ +M 
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               LP +VT++ LI+GL   G+ + A  +L+EM    I+P+   ++++I  +C+     
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +   M + G  PD   YN L+NG+C    V EA  +       G +P + S+S L+
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  +AKR DEA   + +M    + PD V Y  +I GL +A +  +A +L  DM   G  
Sbjct: 379 NGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYP 438

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y+ L+      G LDQA  L   +      P+  T+ I+I GMC+ G   DA++L
Sbjct: 439 PNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAREL 498

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F ++   G  P+  +    IDG+CK G L++A+  F +ME
Sbjct: 499 FAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 232/479 (48%), Gaps = 13/479 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL +F  M   +  P +  +  + +   R + +   +++  +M       ++++ ++LIN
Sbjct: 75  ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              +    +    +L ++ + G+ PN  T++ +I+G C   +   A  LF  M   G  P
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP 194

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +  +Y+ ++ G C++ +  E + LL   +  G  P +  Y+ ++D L + +  +EA   +
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM    I P VV Y  +I GL   G+ K+A  LL++M+   I+PD   ++ LI   C  
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKE 314

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G + +AR +   + +    P+  T+  L+ G C    V +A+K+F  M   G  P V  F
Sbjct: 315 GEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSF 374

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           + L++G CKA  +++A  LF +M            +  G  + D  S  T++   C A  
Sbjct: 375 SILVNGYCKAKRIDEAKQLFDEM------------THRG-LIPDTVSYNTLISGLCQARR 421

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             +A ++   +  +G  P+++TY+ L++   K G ++ A+ LF+ ++  GL+PD VTY  
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +I+G+ +  + +DA  +F ++   G  P+  V    +   C+      A   + Q  +D
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKD 540



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 15/395 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI+G+   G   +A+E F  M     +P+V+ Y+ ++    R       + +   M 
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            + C P++V ++ +++ L K      A+ +  +M   GILP   TYT +I GL  + R  
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA+ L  +MK     PD VA++ L++  CK   V EA  +L++  + G  P + +Y+ L+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G        EA   +  M  +   PDV  + +++ G  +A ++ +A +L  +M  RG++
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PDT  YN LI G C      +A  L  ++      PN  T++IL+  + + G +D A  L
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
           F  ME +G  P +  +N +IDG+CK G+ + A  LF ++ + G  P  ++          
Sbjct: 464 FRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWV---------- 513

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
                   ++  C  GL+ +A+K   Q+ +    P
Sbjct: 514 ----CTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 221/475 (46%), Gaps = 14/475 (2%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A   F  M ++   P  V +  L +   +++     ++L +  E  G    + S + L
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+   R    D  ++   K+ +  +EP+V+ +  +I G    GK+  A++L   M  RG 
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+ + Y+ +IKG C +G   +   L   +      P+   +  ++  +C++ +V++A  
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F KM+  G  P+V  + +LI GL   G  ++A  L  +M             +GGN + 
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM-------------KGGNIMP 299

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   +++  C  G + +A  IL  + E G  PD+ TYN+L+NG+C    +  A K+F
Sbjct: 300 DLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVF 359

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +  KG  PD  ++  L+NG  +  R ++A ++F +M   G  P    Y +L++  C+ 
Sbjct: 360 EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPY 638
           R+   A  L+     +    +  +   + + L K G ++ A+     M+       L  Y
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            I + G+C+ G+ K+A  +F+ L           C   I G+CK G LD A   F
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAF 534



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 141/291 (48%), Gaps = 35/291 (12%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E++ GN+      F VLI    K G+  +A      M E   +PDV  YN ++N    
Sbjct: 289 LNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCL 348

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +   + A  V+  M+    +P++ +FS+L+NG  K+ + + A ++ DEMT RG++P+  +
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +ISGLCQ  R  EA  LF  M  +G  P+ V Y+ LL+   K   +D+A+ L R+ E
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAME 468

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P L +Y+ +IDG                                   + + GK K
Sbjct: 469 NSGLKPDLVTYNIMIDG-----------------------------------MCKYGKFK 493

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           DA +L +++  +G+ P+ +     I G C  GLLD+A     ++ K D  P
Sbjct: 494 DARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 91/188 (48%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           + F     + R+    S S +++   K    D   Q  DE+    +   +  +  LISG 
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            +     +A E F  M      P++  Y+ +L+   ++     A+ ++  M      P++
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VT++++I+G+ K GK + A ++  E++ +G+ PN +  T  I G+C+    DEA++ F +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 229 MKDSGCSP 236
           M+   CSP
Sbjct: 537 MEKDDCSP 544


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 193/709 (27%), Positives = 306/709 (43%), Gaps = 130/709 (18%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +F  +I G+  VG   +A++ F  M+E     PDVY  N +++   ++Q       +   
Sbjct: 12  LFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVY--NVLIDSLSKRQETEAVKKMVQV 69

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP----------------- 201
           MV   C P+  TF+ ++ GL K+GK + A  ++DEM  R I P                 
Sbjct: 70  MVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129

Query: 202 --------------NKFTYTIVISGLCQINRADEAYRLFLKMK----------------- 230
                         N   Y IV+  LC+  R D+A  L   M                  
Sbjct: 130 MERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG 189

Query: 231 --DSG-------------CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             DSG               P  V  N LL GFC   +VD+A  LLR+   +   P   S
Sbjct: 190 LMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVS 249

Query: 276 YSCLIDGLFRA-----------------------------------------KRYDEAYA 294
           Y  ++DGL +A                                          R DEA  
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM E  + PD   YG++I GL++AGK+ DA  L   +   G+ P T  Y +LI G C
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
                D AR L  ++ +R   P+  T+ ++I   C+ GM+++A  L  KM + G  P V 
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429

Query: 415 MFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQGGNRVHDKASLQTM 467
            +N ++DGLCK+  +E+A LLF +ME +G  P      T+ L L Q           Q+ 
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ-----------QSK 478

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++Q C  G + +A+++L ++ + G++PD++TY++LI+G C +  ++ A  L +++  +  
Sbjct: 479 IDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 538

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P  VT  TLI+GL +  R ++A  +   M  +G +P    Y +L+   CR  +   A  
Sbjct: 539 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 598

Query: 588 LWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L    + R ++         +    +   +  A     +M        L  YT  ++G C
Sbjct: 599 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 658

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVF 693
             GQV   L +F  +V C  I +P   V   L   LCK G    A+++ 
Sbjct: 659 SAGQVDGGLKLFGEMV-CAGI-SPDHVVYGTLAAELCKSGRSARALEIL 705



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 179/662 (27%), Positives = 300/662 (45%), Gaps = 47/662 (7%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA++S +   L      +  +Q L+ +   N    S  + +++    K    + ALE   
Sbjct: 114 FATSSFLAHELCLRGSMERAFQLLEIMPVAN----SSAYNIVVVALCKAARVDDALELAR 169

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M E          ++VL           AL VY E  +  CL   VT ++L+ G    G
Sbjct: 170 TMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRG 226

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF------LKMKDSGCSP 236
           + + A ++L  M      P++ +Y  V+ GLC+  R +EA RLF           S   P
Sbjct: 227 QVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPP 286

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               YN ++ G C+  R+DEA+ +     +    P   SY  LIDGL +A + ++A   +
Sbjct: 287 SLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLF 346

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           +K+    + P  V Y  +I GL  A    DA +L +DM  RG  P    YN +I   C  
Sbjct: 347 QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G+L++A  L  ++ +   +P+  T+  ++ G+C++  V++A  LFN+ME+ GC P+    
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466

Query: 417 NALIDGLCKA---------GELEKANLLFYKM-EIGKNPTL------------FLRLSQG 454
           N +I GLC+          G+L++A  L  +M + G  P +              R+   
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526

Query: 455 GNRVHDKASLQ---------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            + + D    Q         T++   C AG I +A ++L  +  SG  PD++TYN+L++G
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G    A +L  ++  +GL P+ VTY  L++GL + +R  +A  +F QM  +GC P+
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLL 624
              Y +L+   C   +      L+ + +      D     ++  E  + G    A++ L 
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706

Query: 625 EMDFKLNDFQLAP--YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           E    L         Y   + GL + G+++ AL     +V    +  P  C  L+ GLCK
Sbjct: 707 EGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 766

Query: 683 RG 684
            G
Sbjct: 767 SG 768



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 215/443 (48%), Gaps = 21/443 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L SG V+  +  +  LI G       + A E F  M    C P    YN +++ + ++ +
Sbjct: 350 LHSG-VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +  +M++   +P++VT++ +++GL KS + E A+ + +EM + G  PN+ ++  
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468

Query: 209 VISGLCQ---INRA------DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +I GLCQ   I++A      DEA+RL  +M D G  PD V Y+ L++G C + RVD+A  
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           LL    K    P + + + LI GL +A R  EA      M      PDVV Y  ++ G  
Sbjct: 529 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 588

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
            AG+ + A +LLSDM  RG+ P+   Y AL+ G C    L +A  +  ++      PN  
Sbjct: 589 RAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 648

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+T LI G C  G VD   KLF +M  AG  P   ++  L   LCK+G   +A      +
Sbjct: 649 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA------L 702

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           EI +     LR    G+ V+  A     V+    AG +  A   +  +   G LP     
Sbjct: 703 EILREGRESLRSEAWGDEVYRFA-----VDGLLEAGKMEMALGFVRDMVRGGQLPAPERC 757

Query: 500 NSLINGFCKVGNINGALKLFKEL 522
            SL+ G CK G    A  + +E+
Sbjct: 758 ASLVAGLCKSGQGGEARAVLEEI 780



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 162/658 (24%), Positives = 260/658 (39%), Gaps = 130/658 (19%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK----------------------- 230
           M Q+GI P    +T VI G C + R  EA ++F  M+                       
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 231 -----------DSGCSPDFVAYNALLNGFCKLRRVDEALALL------------------ 261
                      D GC PD   +  +L G CK  ++DEA  ++                  
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 262 -----------RSFEKDGFVPRLGS--YSCLIDGLFRAKRYDEAYAWYRKMFEEKI---- 304
                      R+F+    +P   S  Y+ ++  L +A R D+A    R M E++I    
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180

Query: 305 ----------------------------EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
                                       EP +V   V++ G    G+V  A +LL  M +
Sbjct: 181 GSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPD 240

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQA------RSLQVEIWKRDSLPNTHTFTILICGMCR 390
               PD   Y  ++ G C  G +++A      R L        S P+   + I+I G+C+
Sbjct: 241 EECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ 300

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFL 449
           N  +D+A ++F KM +    P    +  LIDGL KAG+L  A  LF K +  G  P+   
Sbjct: 301 NDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS--- 357

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  +++   C A     A ++   +   G  P  +TYN +I+  CK 
Sbjct: 358 -----------TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKR 406

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A  L K++   G  PD VTY T+++GL +  R E+A  +F +M + GCTP+   +
Sbjct: 407 GMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSH 466

Query: 570 ---------KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENA 619
                    +S +  +C+R K   AF L  +   D    D  +  + I        V++A
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
              L +M  +     +      + GLC+ G++KEA  +   +V         +   L+HG
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            C+ G  + A ++    +  G  L P V  Y        K N+   A  +  +MKS G
Sbjct: 587 HCRAGQTERARELLSDMVARG--LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 642



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 9/264 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KR+   +  + + +I  L K        + LD + S   S     +  L+ G+ + G  E
Sbjct: 535 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 594

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A E    M      P+V  Y A+++   +      A  V+ +M    C PN+ T++ LI
Sbjct: 595 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G   +G+ +  +K+  EM   GI P+   Y  + + LC+  R+  A  +  + ++S  S
Sbjct: 655 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714

Query: 236 PDF--VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             +    Y   ++G  +  +++ AL  +R   + G +P     + L+ GL ++ +  EA 
Sbjct: 715 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA- 773

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRG 317
              R + EE ++   + YG   RG
Sbjct: 774 ---RAVLEEIMD---LAYGGKARG 791


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 180/711 (25%), Positives = 325/711 (45%), Gaps = 35/711 (4%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSG 92
           V +V+    +P      F  A      +  AS    I   L  +G F+   + L E+R  
Sbjct: 10  VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN 69

Query: 93  -NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            N +++   +   +  Y + G  ++A+++F +M  ++C P V+ +NA++NI         
Sbjct: 70  VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQ 129

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  VY  M       ++ T+++ I    K+ +   A+++L  M + G   N   Y  V++
Sbjct: 130 AHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVA 189

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GL      D A  LF +M      PD VA+N L++  CK   V E+  LL    K G  P
Sbjct: 190 GLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249

Query: 272 RLGSYSCLIDGL---------FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
            L +++  + GL          R  R  EA  + RKM     EPD + Y  +I G  + G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            V+DA ++L D   +G  PD + Y +LI GFC  G  D+A ++  +   +   P+   + 
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYN 369

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEI 441
            LI G+ + G++  A +L N+M + GC P++  +N +I+GLCK G +  A +L+   +  
Sbjct: 370 TLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK 429

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P +F              +  T+++ YC    +  A +++ ++   G  PD+ITYN+
Sbjct: 430 GCPPDIF--------------TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L+NG CK G     +++FK ++ KG  P+ +TY  +++ L +  +  +A  + G+M   G
Sbjct: 476 LLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG 535

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             P    + +L T  C+      A+ L+  ++   D+          +  F ++  +  A
Sbjct: 536 LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMA 595

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           ++    M     D     Y + + G C+ G + +        +E + I +  +  ++++ 
Sbjct: 596 MKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNC 655

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           LC +  +  A+ +    L+ G +  P   N      +F  D K V A  +L
Sbjct: 656 LCVKDKVHEAVGIIHLMLQKGIV--PETVN-----TIFEADKKVVAAPKIL 699


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 259/528 (49%), Gaps = 22/528 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L+S  + V  +    L+ G  KVG  + A E + ++     Q +VY  N ++N   + Q 
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                +   +M +    P++VT++ LIN   + G  E A +++D M+ +G+ P  FTY  
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC+  +   A  +  +M   G SPD   YN LL   C+   + +A  +       G
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP L S+S LI  L +    D+A  ++R M    + PD V+Y ++I G    G + +A+
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M E+G V D   YN ++ G C   +L +A  L  E+ +R   P+ +TFT LI G 
Sbjct: 450 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 509

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNP 445
            ++G ++ A  LF  M +    P V  +N LIDG CK  E+EK N L+  M    I  N 
Sbjct: 510 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 569

Query: 446 TLFLRLSQG---------GNRVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQ 486
             +  L  G           R+ D+           +  T+V+ YC AG   KA + L  
Sbjct: 570 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 629

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G +PD ITYN+LINGF K  N++ A  L  +++  GL PD +TY  ++NG  R  R
Sbjct: 630 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 689

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            ++A  I  +M + G  P  + Y SL+     +     AF +  + L+
Sbjct: 690 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 737



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 240/465 (51%), Gaps = 13/465 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y + G  E+A E    M     +P V+ YNA++N   +   +L A  V  EM
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K+   P+  T+++L+    ++     A ++ DEM  +G++P+  +++ +I  L +    
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A + F  MK++G +PD V Y  L+ GFC+   + EAL +     + G V  + +Y+ +
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL + K   EA   + +M E  + PD   +  +I G S+ G +  A+ L   M +R +
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI GFC    +++   L  ++  R   PN  ++ ILI G C  G V +A +
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L+++M + G   ++   N ++ G C+AG   KA+     M           L +G   V 
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM-----------LLKG--IVP 637

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++  +     + +A+ ++ ++  SG LPD+ITYN ++NGF + G +  A  + 
Sbjct: 638 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 697

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            ++  +G+ PD  TY +LING    +  ++AFR+  +M Q G  P
Sbjct: 698 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 206/431 (47%), Gaps = 13/431 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+G  K G   +A     +M +    PD   YN +L    R    + A  ++ EM
Sbjct: 326 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 385

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P++V+FS LI  LSK+G  + A+K   +M   G+ P+   YTI+I G C+    
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA ++  +M + GC  D V YN +LNG CK + + EA  L     + G  P   +++ L
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +    ++A   +  M +  ++PDVV Y  +I G  +  +++   +L +DM  R I
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  LI G+C++G + +A  L  E+ ++       T   ++ G CR G    A +
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 625

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             + M   G  P    +N LI+G  K   +++A  L  KME   N  L          + 
Sbjct: 626 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME---NSGL----------LP 672

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++  +   G + +A  I++++ E G  PD  TY SLING     N+  A ++ 
Sbjct: 673 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732

Query: 520 KELQLKGLRPD 530
            E+  +G  PD
Sbjct: 733 DEMLQRGFVPD 743



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 260/610 (42%), Gaps = 67/610 (10%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           ++A+++I  R +    A AV   MV+                  KSG + V I     +T
Sbjct: 135 FSAMIHILVRSRRLPDAQAVILRMVR------------------KSGVSRVEIVESLVLT 176

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                 N   + +++    Q  +  E    F  +K  G      A N+LL G  K+  VD
Sbjct: 177 YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD 236

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A  + +   + G    + + + +I+ L + ++ +   ++   M E+ + PDVV Y  +I
Sbjct: 237 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 296

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
                 G +++A +L+  M  +G+ P  + YNA+I G C  G   +A+ +  E+ K    
Sbjct: 297 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 356

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+T T+ IL+   CRN  + DA+++F++M   G  P +  F+ALI  L K G L++A   
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F  M   KN  L            D      ++  +C  G++ +A K+  ++ E G + D
Sbjct: 417 FRDM---KNAGL----------APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+++NG CK   ++ A +LF E+  +G+ PD  T+ TLING  +      A  +F 
Sbjct: 464 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 523

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M Q    P    Y +L+   C+  +      LW                   + + +  
Sbjct: 524 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW------------------NDMISRRI 565

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             N I                 Y I + G C  G V EA  ++  +VE     T  +C  
Sbjct: 566 YPNHIS----------------YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           ++ G C+ G    A +     L  G +      N L+    F K+     A+ L+ +M++
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING--FIKEENMDRAFALVNKMEN 667

Query: 736 VGYDLDACLY 745
            G   D   Y
Sbjct: 668 SGLLPDVITY 677



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 209/430 (48%), Gaps = 15/430 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K   +      LDE+    +S  +  + +L+    +  +   A   F +M  
Sbjct: 328 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 387

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD+  ++A++ +  +      AL  + +M      P+ V +++LI G  ++G    
Sbjct: 388 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 447

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ DEM ++G + +  TY  +++GLC+     EA  LF +M + G  PDF  +  L+N
Sbjct: 448 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 507

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+ K   +++A+ L     +    P + +Y+ LIDG  +    ++    +  M   +I P
Sbjct: 508 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + + YG++I G    G V +A +L  +M E+G        N ++KG+C  G   +A    
Sbjct: 568 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 627

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +  +P+  T+  LI G  +   +D A  L NKME +G  P V  +N +++G  + 
Sbjct: 628 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 687

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A L+  KM E G NP              D+++  +++  + T   + +A+++  
Sbjct: 688 GRMQEAELIMLKMIERGVNP--------------DRSTYTSLINGHVTQNNLKEAFRVHD 733

Query: 486 QLAESGNLPD 495
           ++ + G +PD
Sbjct: 734 EMLQRGFVPD 743



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 177/363 (48%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F     +  +    S SA+I +L K    D   +   ++++  ++  + ++ +LI G+
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            + G   +AL+   +M E  C  DV  YN +LN   ++++   A  ++ EM +    P+ 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF+ LING SK G    A+ + + M QR + P+  TY  +I G C+ +  ++   L+  
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M      P+ ++Y  L+NG+C +  V EA  L     + GF   + + + ++ G  RA  
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             +A  +   M  + I PD + Y  +I G  +   +  A  L++ M   G++PD   YN 
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++ GF   G + +A  + +++ +R   P+  T+T LI G      + +A ++ ++M + G
Sbjct: 680 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 739

Query: 409 CFP 411
             P
Sbjct: 740 FVP 742


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 179/650 (27%), Positives = 307/650 (47%), Gaps = 70/650 (10%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            V++S + +    + AL +F ++  F  C P V  +NA+L+   R + F  A A +  + 
Sbjct: 88  LVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLS 147

Query: 161 K----LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
                    PN+ T+++++  L   G  + A+ + D +  RG+ P++ TY+ ++SG  + 
Sbjct: 148 HGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN 207

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGS 275
           NR D A  L  +M      PD V YNALL G  +    ++A+ +     +D G  P L +
Sbjct: 208 NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLAT 267

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++DGL +   + EA   + +M     +PD++ YG MI GL  +  V  A ++ S+M 
Sbjct: 268 YNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI 327

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP---NTHTFTILICGMCRNG 392
           + G+VPD   YN+L+KGFC  G + +A     + W   S+    N  ++ I++ G+   G
Sbjct: 328 KTGLVPDVVIYNSLLKGFCHAGRVGEA----WKFWDSMSVSGIRNVTSYNIMLKGLFDGG 383

Query: 393 MVDDAQKLFNKMEKAGCF-PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           MVD A  L+  +EK     P +  F+ +I GLC+ G   K+      ++I       L  
Sbjct: 384 MVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKS------LQI-------LEE 430

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           ++   +  D+ S  +M+   C  G +  A K+  +++     P+   YN+LINGFC+   
Sbjct: 431 ARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASK 490

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A++++ ++      P ++TY TLI+GL + ++  +A R   +M + GC      Y S
Sbjct: 491 FSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGS 550

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   CR +K   A +LW Q                   L KG         L+ D  + 
Sbjct: 551 LIRGLCRDKKIDGALALWNQ------------------ILDKG---------LQTDVVM- 582

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE----CKAIVTPPSCVKLIHGLCKRGYLD 687
                 + I + GLC  G+V EA  + S + E    C  +VT  +   L+ G  + G  D
Sbjct: 583 ------HNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT---LMDGFYETGCFD 633

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            A  +++  L+NG +  P + +Y  R       N+      LL  M + G
Sbjct: 634 KAASLWMAILENGLV--PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 257/514 (50%), Gaps = 28/514 (5%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D LR   ++     +  L+SG+ K    + AL    +M  ++ QPD   YNA+L   FR
Sbjct: 182 FDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFR 241

Query: 146 KQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
              F  A+ V+ ++V+     PN+ T++++++GL K G  + A  + + M      P+  
Sbjct: 242 NGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMI 301

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY  +I GLC+    D A R++ +M  +G  PD V YN+LL GFC   RV EA     S 
Sbjct: 302 TYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM 361

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYA-WYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              G +  + SY+ ++ GLF     D+A   W     ++ + PD+V +  MI GL E G 
Sbjct: 362 SVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
              ++++L + R  G   D + Y+++I G C  G LD A  L  +I      PN+H +  
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---- 439
           LI G C+     DA +++++M +  C P+   +N LI GLCKA +  +A+    +M    
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540

Query: 440 ---EIGKNPTLFLRLSQGG---------NRVHDKASLQT-------MVEQYCTAGLIHKA 480
              ++    +L   L +           N++ DK  LQT       ++   C+AG + +A
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG-LQTDVVMHNILIHGLCSAGKVDEA 599

Query: 481 YKILMQLAESGN-LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            ++L ++ E  N  P+++TYN+L++GF + G  + A  L+  +   GL PD ++Y T I 
Sbjct: 600 SQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIK 659

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           GL   +R  +  ++  +M  +G  P+   +  L+
Sbjct: 660 GLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 187/350 (53%), Gaps = 3/350 (0%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC-QPDVYIYNAVLN 141
           W+  D +    +  V+  + +++ G +  G  +KA + +  +++ D   PD+  ++ +++
Sbjct: 355 WKFWDSMSVSGIRNVTS-YNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIH 413

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
               K     +L +  E        +  ++S +I+GL K G+ + A+K+ ++++     P
Sbjct: 414 GLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKP 473

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N   Y  +I+G CQ ++  +A R++ +M ++ CSP  + YN L++G CK  +  EA    
Sbjct: 474 NSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFT 533

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           R   + G +  + +Y  LI GL R K+ D A A + ++ ++ ++ DVV++ ++I GL  A
Sbjct: 534 REMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSA 593

Query: 322 GKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           GKV +A +LLS+M+E+    P+   YN L+ GF + G  D+A SL + I +   +P+  +
Sbjct: 594 GKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIIS 653

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +   I G+C      +  +L N+M  +G  P+   +N L+  + K G ++
Sbjct: 654 YNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K L  F S S++IS L K    D   +  +++   +    S ++  LI+G+ +      A
Sbjct: 436 KELDEF-SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           +  + +M E DC P    YN +++   + + +L A     EM++  C+ ++ T+  LI G
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRG 554

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSP 236
           L +  K + A+ + +++  +G+  +   + I+I GLC   + DEA +L  +MK+ + C P
Sbjct: 555 LCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCP 614

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YN L++GF +    D+A +L  +  ++G VP + SY+  I GL    R  E     
Sbjct: 615 NVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLL 674

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +M    I P  + + +++R + + G ++
Sbjct: 675 NEMLASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 175/656 (26%), Positives = 301/656 (45%), Gaps = 70/656 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L SG++++   E A++ FG M      P V  +  ++ +  R     + ++++ +M    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              N  +F++L+       K   A+    ++T+ G  P   T++ ++ GLC  +R  EA 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M    C P+ V +  L+NG C+  RV EA+ALL    +DG  P   +Y  ++DG+
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 284 FRAKRYDEAYAWYRKMFE-EKIEPDVVLYGV-----MIRGLSEAGKVKDAMKLLSDMRER 337
            +      A    RKM E   I+P+VV++ +     MI G   +G+  +A +LL +M ER
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 338 -GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             I PD   YNALI  F   G   +A  L  E+  R  +P+T T++ +I G C+   +D 
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A+ +F  M   GC P +  FN LI G C+A  ++    L ++M            ++ G 
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM------------TEAG- 391

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            V +  +  T++  +C  G ++ A  +L ++  SG  P+++T N+L++G C  G +  AL
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451

Query: 517 KLFKELQ-----------LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           ++FK +Q             G+ PD  TY  LI+GL    +  +A  ++ +MP  G  P 
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y S++   C++ +                   DE+ +  +    K    N +     
Sbjct: 512 TITYNSVIHGLCKQSRL------------------DEATQMFDSMGSKSFSPNVVT---- 549

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       +T  + G C+ G+V + L +F  +     +    + + LIHG  K G 
Sbjct: 550 ------------FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGN 597

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           ++ A+D+F   + +G          +L   L+SK+  K     L     SVGY L+
Sbjct: 598 INGALDIFQEMMASGVYPDTITIRNMLTG-LWSKEELKRAVAMLEDLQMSVGYQLE 652



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 221/445 (49%), Gaps = 35/445 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIY-----NAVLNIAFRKQLFLLAL 153
            +  ++ G  K+GD   AL    KM+E    +P+V I+       ++N       +  A 
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275

Query: 154 AVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            +  EM++   + P++VT++ LIN   K GK   A ++ DEM  RGI+P+  TY+ +I G
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C+ NR D A  +F  M   GCSPD + +N L+ G+C+ +RVD+ + LL    + G V  
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y+ LI G  +    + A    ++M    + P+VV    ++ GL + GK+KDA+++  
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 455

Query: 333 DMRE-----------RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            M++            G+ PD   YN LI G  + G   +A  L  E+  R  +P+T T+
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 515

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
             +I G+C+   +D+A ++F+ M      P+V  F  LI+G CKAG ++    LF +M  
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEM-- 573

Query: 442 GKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        G R  V +  +  T++  +   G I+ A  I  ++  SG  PD IT 
Sbjct: 574 -------------GRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 500 NSLINGFCKVGNINGALKLFKELQL 524
            +++ G      +  A+ + ++LQ+
Sbjct: 621 RNMLTGLWSKEELKRAVAMLEDLQM 645



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 189/435 (43%), Gaps = 29/435 (6%)

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  E   ++DA+ L  DM     +P    +  L+     +G LD   SL  ++  R    
Sbjct: 52  GFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC 111

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N ++FTIL+   C    +  A   F K+ K G  P+V  F+ L+ GLC    + +A  LF
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           ++M     P +               +  T++   C  G + +A  +L ++ E G  P+ 
Sbjct: 172 HQM---CKPNV--------------VTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQ 214

Query: 497 ITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTY-----GTLINGLQRVDREEDA 550
           ITY ++++G CK+G+   AL L +++ ++  ++P+ V +       +ING     R  +A
Sbjct: 215 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEA 274

Query: 551 FRIFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIE 608
            ++  +M  +   +P    Y +L+    +  KF  A  L+ + L R I          I+
Sbjct: 275 QQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMID 334

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F ++  ++ A      M  K     +  +   + G C+  +V + + +   + E   + 
Sbjct: 335 GFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 394

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH-AY 727
              +   LIHG C+ G L+ A D+    + +G       CN LL  L    DN K+  A 
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC---DNGKLKDAL 451

Query: 728 HLLCRMKSVGYDLDA 742
            +   M+    D+DA
Sbjct: 452 EMFKAMQKSKMDIDA 466



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++VI  L K +  D   Q  D + S + S     F  LI+GY K G  +  LE F +M  
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGR 575

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                +   Y  +++  FRK   +  AL ++ EM+     P+ +T   ++ GL    + +
Sbjct: 576 RGIVANAITYITLIH-GFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELK 634

Query: 186 VAIKMLDEM 194
            A+ ML+++
Sbjct: 635 RAVAMLEDL 643


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 281/573 (49%), Gaps = 42/573 (7%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E  C P+   Y+ VL       +   AL +   M K    C P++V +S +I+G   
Sbjct: 218 RMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFN 277

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+T  A  +  EMT++G+ P+  TY ++I  LC+    D+A  +  +M   G  PD V 
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVT 337

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+ +++G+  L R+ EA  + R  +K G +P + + +  +  L +  R  EA  ++  M 
Sbjct: 338 YSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMT 397

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  +PD+  Y  ++ G +  G   D + L + M+  GI  + + +  LI  +   G++D
Sbjct: 398 AKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVD 457

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A  +  E+ ++   P+  T++ +I    R G + DA + FN+M   G  P+  +++++I
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517

Query: 421 DGLCKAGELEKANLLFYKM---EIGKNPTLFL-----RLSQGGN--RVHDKASLQT---- 466
            G C  G L KA  L  +M    I +   +F       L + G     HD   L T    
Sbjct: 518 QGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE 577

Query: 467 ---------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                    +++ YC  G + KA+KIL  +   G  PDI+TYN+L++G+ K G IN  L 
Sbjct: 578 RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLT 637

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+E+Q KG++P++VTYG ++ GL R  R   A + F +M ++G T + ++Y  ++   C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 578 RRRKFSLAFSLW-------LQYLRDISGRDDESMKSIEEFLQKGEVENAI--QGLLEMDF 628
           R      A  L+       +++   I      +M  ++   +  E+   I   GLL  + 
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE- 756

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  + Y + +I L +DG V++A N+FS +
Sbjct: 757 -------STYGVMIINLLKDGGVEDANNMFSSM 782



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 215/498 (43%), Gaps = 16/498 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L K    D     L ++ +      +  +  +I GY  +G  ++A + F +MK+  
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRG 365

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P++   N+ L    +      A   +  M      P+I ++  L++G +  G     I
Sbjct: 366 LIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + + M   GI  N   +TI+I    +    D+A  +F +M+  G SPD V Y+ +++ F
Sbjct: 426 GLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF 485

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-EPD 307
            ++ R+ +A+         G  P    YS +I G        +A     +M  + I  PD
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V +  +I  L + G+V DA  +     + G  P    +N+LI G+C +G +D+A  +  
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +      P+  T+  L+ G  +NG ++D   LF +M++ G  P+   +  ++ GL +AG
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
               A   F++M E G   T+ +                 ++   C      +A  +  +
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSI--------------YGIILGGLCRNNCADEAIILFQK 711

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L        I   N++IN   KV     A +LF  +   GL P+  TYG +I  L +   
Sbjct: 712 LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGG 771

Query: 547 EEDAFRIFGQMPQNGCTP 564
            EDA  +F  M ++G  P
Sbjct: 772 VEDANNMFSSMEKSGIVP 789



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 181/383 (47%), Gaps = 5/383 (1%)

Query: 63  FASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            A+N  V ++L+    K    D       E++   VS     +  +IS + ++G    A+
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAM 495

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC-LPNIVTFSLLING 177
           E F +M     QP+  +Y++++         + A  +  EM+      P+IV FS +IN 
Sbjct: 496 EKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINS 555

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L K G+   A  + D  T  G  P   T+  +I G C + + D+A+++   M+  G  PD
Sbjct: 556 LCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPD 615

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            V YN LL+G+ K  R+++ L L R  ++ G  P   +Y  ++ GLFRA R   A   + 
Sbjct: 616 IVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M E      V +YG+++ GL       +A+ L   +    +       N +I     + 
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             ++A+ L   I     LPN  T+ ++I  + ++G V+DA  +F+ MEK+G  P   + N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLN 795

Query: 418 ALIDGLCKAGELEKANLLFYKME 440
            +I  L + GE+ KA     K++
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVD 818



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 114/241 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY  VG  +KA +    M+    +PD+  YN +L+  F+       L ++ EM
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    PN VT+ +++ GL ++G+T  A K   EM + G       Y I++ GLC+ N A
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  LF K+            N ++N   K++R +EA  L  +    G +P   +Y  +
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L +    ++A   +  M +  I P   L   +IR L E G++  A   LS +  + I
Sbjct: 763 IINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822

Query: 340 V 340
           +
Sbjct: 823 L 823



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 163/348 (46%), Gaps = 9/348 (2%)

Query: 61  RSFASNSAVISMLLKPNGFDLYW------QTLDELRSGNVSVVSDVFFV-LISGYYKVGD 113
           R    N+AV S +++  GF ++       + + E+ +  +     VFF  +I+   K G 
Sbjct: 504 RGIQPNTAVYSSIIQ--GFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGR 561

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
              A + F    +   +P V  +N++++          A  +   M  +   P+IVT++ 
Sbjct: 562 VMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNT 621

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L++G  K+G+    + +  EM ++G+ PN  TY I+++GL +  R   A + F +M +SG
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            +     Y  +L G C+    DEA+ L +          +   + +I+ +++ +R +EA 
Sbjct: 682 TTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAK 741

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +  +    + P+   YGVMI  L + G V+DA  + S M + GIVP +   N +I+  
Sbjct: 742 ELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRML 801

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
            + G + +A +   ++  +  L    T ++++    R G   +  KL 
Sbjct: 802 LEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 8/254 (3%)

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           +P   TYN L++  C+    +  L LF  +   GL+ D +T  TL+  L   +R E+A  
Sbjct: 154 VPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213

Query: 553 I-FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS----I 607
           +   +M + GC P+   Y  ++   C       A  L LQ +    G     + +    I
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDL-LQMMAKQGGACSPDVVAYSTVI 272

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
             F  +GE   A     EM  +     +  Y + +  LC+   + +A  +   +    A 
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               +   +IHG    G L  A  +F    K G I     CN  L SL   K  +   A 
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASL--CKHGRSKEAA 390

Query: 728 HLLCRMKSVGYDLD 741
                M + G+  D
Sbjct: 391 EFFDSMTAKGHKPD 404


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 250/487 (51%), Gaps = 25/487 (5%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N   N+ T+S +I  L K  K E + K+L+EM   G  P+ F +  V+ G  + N  ++A
Sbjct: 5   NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             ++  M +SG  PD V+Y+ L++G  K+ ++DE+L +L      G  P + +YS L+  
Sbjct: 65  REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +A+R D A + + +M      PD +++  +I GL +AGKVKDA +    M + G  P+
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN L+ G C  G L+QA +L  E+      P+  T+  L+  +C+   V++  KLF 
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGG 455
            M  AG  P+V  F+ LI GLC+ GELEKA  +F  M E G  P      TL   L +  
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304

Query: 456 NRVH---------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITY 499
             +                D  +  +++  YC  G + +A K+  +++    L P I+T+
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N+LI+GFCK+G +  A +L  E+  KGL  DS TY  LI GL R  + ++A  ++ QM +
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE 424

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVEN 618
                 P    S +   C+      A++++    +  +  + E+ + + E L K G VE+
Sbjct: 425 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVED 484

Query: 619 AIQGLLE 625
           A Q L+E
Sbjct: 485 A-QKLME 490



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 262/529 (49%), Gaps = 58/529 (10%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  + I  N FTY+ +I  L +  + +E+Y++  +M  +GC+PD  A+N ++        
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQ------- 53

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
                                       G  R+   ++A   Y+ M E   +PD V Y +
Sbjct: 54  ----------------------------GFARSNNMEKAREVYQHMVESGYKPDNVSYHI 85

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL++ GK+ +++K+LS+M  RG  P    Y++L++       +D A SL  E+ +  
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+   F  LI G+C+ G V DA + F +M K GC P+V ++N L+ GLC +G+LE+AN
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            LF +M             +  +   D  +  T+++  C A  + +  K+   +  +G +
Sbjct: 206 TLFAEM-------------KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P++IT+++LI+G C+ G +  AL++F  +   G +P+  TY TLI+GL R ++   A  +
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD--DESMKS----I 607
           F +M Q    P    Y SL+   C+R     A  L+    R++SG      ++ +    I
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY----REMSGGAGLQPTIVTFNTLI 368

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + F + G++  A + + EM  K        Y I + GL +  ++ EAL ++  + E K +
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFL 428

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           + P SCV  + GLCK G +D A  VF  T K+G +  P     L  SL+
Sbjct: 429 LDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 477



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 242/486 (49%), Gaps = 16/486 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +R  N++     +  +I    K    E++ +   +M    C PDV+ +N V+    R   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  VY  MV+    P+ V++ +LI+GL+K GK + ++K+L EM  RG  P+   Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++  L +  R D A  LF +M   G  PD + +  L+ G C+  +V +A    +   K G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ L+ GL  + + ++A   + +M      PDVV Y  ++  + +A +V++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   MR  G VP+   ++ LI G C  G L++A  +   + +    PN +T+T LI G+
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK--NPT 446
           CR   V  A++LF KM +A   P    +N+LI G CK G +++A  L+ +M  G    PT
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T+++ +C  G + +A +++ ++   G   D  TY  LI G 
Sbjct: 361 IV--------------TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            +   ++ AL+++K+++ K    D V+  + + GL +    + A+ +F    ++G  P+P
Sbjct: 407 SRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNP 466

Query: 567 AVYKSL 572
             ++ L
Sbjct: 467 ETFRIL 472



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 248/503 (49%), Gaps = 22/503 (4%)

Query: 59  RLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R ++ A+N    S++I  L+K    +  ++ L+E+ +   +     F  ++ G+ +  + 
Sbjct: 2   RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 61

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           EKA E +  M E   +PD   Y+ +++   +      +L +  EMV     P++  +S L
Sbjct: 62  EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSL 121

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           +  L+K+ + + A  + DEM + G  P++  +  +I GLCQ  +  +A   F +M   GC
Sbjct: 122 VRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGC 181

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+   YN LL+G C   ++++A  L    +     P + +Y+ L+D + +A+R +E   
Sbjct: 182 QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCK 241

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            +  M      P+V+ +  +I GL   G+++ A+++   M E G  P+ Y Y  LI G C
Sbjct: 242 LFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLC 301

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME-KAGCFPSV 413
               + QAR L  ++ +    P+   +  LI G C+ G +D+A+KL+ +M   AG  P++
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR--VHDKASLQTMVEQY 471
             FN LIDG CK G+L +AN L  +M               G +    D  + + ++   
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEM---------------GTKGLAADSCTYRILIAGL 406

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
             A  + +A ++  Q+ E   L D ++  S + G CK GNI+ A  +F+  +  G  P+ 
Sbjct: 407 SRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNP 466

Query: 532 VTYGTLINGLQRVDREEDAFRIF 554
            T+  L   L ++ R EDA ++ 
Sbjct: 467 ETFRILSESLIKLGRVEDAQKLM 489



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 1/381 (0%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R +  S  + S+++  L K    D      DE+  G       +F+ LI G  + G  + 
Sbjct: 109 RGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKD 168

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A E F +M +  CQP+V +YN +L+          A  ++ EM   +C P++VT++ L++
Sbjct: 169 ASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            + K+ + E   K+ + M   G +PN  T++ +I GLC+    ++A  +F  M ++GC P
Sbjct: 229 AVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 288

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   Y  L++G C+  +V +A  L     +    P   +Y+ LI G  +    DEA   Y
Sbjct: 289 NKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348

Query: 297 RKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           R+M     ++P +V +  +I G  + GK+  A +L+++M  +G+  D+  Y  LI G   
Sbjct: 349 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              LD+A  +  ++ ++  L +  +    + G+C+ G +D A  +F    K+G  P+   
Sbjct: 409 ATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET 468

Query: 416 FNALIDGLCKAGELEKANLLF 436
           F  L + L K G +E A  L 
Sbjct: 469 FRILSESLIKLGRVEDAQKLM 489



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 172/394 (43%), Gaps = 54/394 (13%)

Query: 34  VTSVIMKTKNPQV-GFRFFIWAAKRKRLRSFASN--SAVISMLLKPNGFDLYWQTLDELR 90
           ++ ++M+ + P +  +   + A  + R    AS+    +I     P+    Y   L   +
Sbjct: 103 LSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQ 162

Query: 91  SGNVSVVSD---------------VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
           +G V   S+               V+ VL+ G    G  E+A   F +MK   C PDV  
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YN +L+   + +       ++  M     +PN++TFS LI+GL ++G+ E A+++   M 
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL---------- 245
           + G  PNK+TYT +ISGLC+  +  +A  LF KM  +   PD VAYN+L+          
Sbjct: 283 EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342

Query: 246 --------------------------NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                                     +GFCKL ++  A  L+      G      +Y  L
Sbjct: 343 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRIL 402

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL RA + DEA   Y++M E+K   D V     + GL + G +  A  +    R+ G 
Sbjct: 403 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 462

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           VP+   +  L +    LG ++ A+ L      RD
Sbjct: 463 VPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/268 (21%), Positives = 105/268 (39%), Gaps = 39/268 (14%)

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++ TY+S+I    K      + K+ +E+   G  PD   +  ++ G  R +  E A  ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             M ++G  P                  ++++ + +  L  I G+ DES+K + E + +G
Sbjct: 69  QHMVESGYKPD-----------------NVSYHILIHGLAKI-GKLDESLKILSEMVMRG 110

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +  +                +  Y+  +  L +  +V  A ++F  ++            
Sbjct: 111 QTPS----------------MQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFY 154

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           +LI GLC+ G +  A + F    K+G      V N LL  L  S   ++ +   L   MK
Sbjct: 155 ELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT--LFAEMK 212

Query: 735 SVGYDLDACLYPKTKSLLPGPWNTREME 762
           S     D   Y    +LL      R +E
Sbjct: 213 SHSCSPDVVTY---NTLLDAVCKARRVE 237


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 259/528 (49%), Gaps = 22/528 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L+S  + V  +    L+ G  KVG  + A E + ++     Q +VY  N ++N   + Q 
Sbjct: 53  LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 112

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                +   +M +    P++VT++ LIN   + G  E A +++D M+ +G+ P  FTY  
Sbjct: 113 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 172

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC+  +   A  +  +M   G SPD   YN LL   C+   + +A  +       G
Sbjct: 173 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP L S+S LI  L +    D+A  ++R M    + PD V+Y ++I G    G + +A+
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M E+G V D   YN ++ G C   +L +A  L  E+ +R   P+ +TFT LI G 
Sbjct: 293 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 352

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNP 445
            ++G ++ A  LF  M +    P V  +N LIDG CK  E+EK N L+  M    I  N 
Sbjct: 353 SKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 412

Query: 446 TLFLRLSQG---------GNRVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQ 486
             +  L  G           R+ D+           +  T+V+ YC AG   KA + L  
Sbjct: 413 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 472

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G +PD ITYN+LINGF K  N++ A  L  +++  GL PD +TY  ++NG  R  R
Sbjct: 473 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            ++A  I  +M + G  P  + Y SL+     +     AF +  + L+
Sbjct: 533 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 240/464 (51%), Gaps = 13/464 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI+ Y + G  E+A E    M     +P V+ YNA++N   +   +L A  V  EM+
Sbjct: 135 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 194

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K+   P+  T+++L+    ++     A ++ DEM  +G++P+  +++ +I  L +    D
Sbjct: 195 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 254

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A + F  MK++G +PD V Y  L+ GFC+   + EAL +     + G V  + +Y+ ++
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL + K   EA   + +M E  + PD   +  +I G S+ G +  A+ L   M +R + 
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN LI GFC    +++   L  ++  R   PN  ++ ILI G C  G V +A +L
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           +++M + G   ++   N ++ G C+AG   KA+     M           L +G   V D
Sbjct: 435 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM-----------LLKG--IVPD 481

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++  +     + +A+ ++ ++  SG LPD+ITYN ++NGF + G +  A  +  
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 541

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           ++  +G+ PD  TY +LING    +  ++AFR+  +M Q G  P
Sbjct: 542 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 206/430 (47%), Gaps = 13/430 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G  K G   +A     +M +    PD   YN +L    R    + A  ++ EM 
Sbjct: 170 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 229

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +P++V+FS LI  LSK+G  + A+K   +M   G+ P+   YTI+I G C+     
Sbjct: 230 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 289

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++  +M + GC  D V YN +LNG CK + + EA  L     + G  P   +++ LI
Sbjct: 290 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  +    ++A   +  M +  ++PDVV Y  +I G  +  +++   +L +DM  R I 
Sbjct: 350 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI G+C++G + +A  L  E+ ++       T   ++ G CR G    A + 
Sbjct: 410 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 469

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            + M   G  P    +N LI+G  K   +++A  L  KME   N  L          + D
Sbjct: 470 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME---NSGL----------LPD 516

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   ++  +   G + +A  I++++ E G  PD  TY SLING     N+  A ++  
Sbjct: 517 VITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHD 576

Query: 521 ELQLKGLRPD 530
           E+  +G  PD
Sbjct: 577 EMLQRGFVPD 586



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 246/568 (43%), Gaps = 49/568 (8%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           + KSG + V I     +T      N   + +++    Q  +  E    F  +K  G    
Sbjct: 2   VRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVS 61

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
             A N+LL G  K+  VD A  + +   + G    + + + +I+ L + ++ +   ++  
Sbjct: 62  INACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLS 121

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M E+ + PDVV Y  +I      G +++A +L+  M  +G+ P  + YNA+I G C  G
Sbjct: 122 DMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTG 181

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
              +A+ +  E+ K    P+T T+ IL+   CRN  + DA+++F++M   G  P +  F+
Sbjct: 182 KYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 241

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ALI  L K G L++A   F  M   KN  L            D      ++  +C  G++
Sbjct: 242 ALIGLLSKNGCLDQALKYFRDM---KNAGL----------APDNVIYTILIGGFCRNGVM 288

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A K+  ++ E G + D++TYN+++NG CK   ++ A +LF E+  +G+ PD  T+ TL
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ING  +      A  +F  M Q    P    Y +L+   C+  +      LW        
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW-------- 400

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                      + + +    N I                 Y I + G C  G V EA  +
Sbjct: 401 ----------NDMISRRIYPNHIS----------------YGILINGYCNMGCVSEAFRL 434

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           +  +VE     T  +C  ++ G C+ G    A +     L  G +      N L+    F
Sbjct: 435 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING--F 492

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            K+     A+ L+ +M++ G   D   Y
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITY 520



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 260/577 (45%), Gaps = 51/577 (8%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           NC  N + F LL+    ++ K     +    +  +G+  +      ++ GL ++   D A
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + ++ ++  SG   +    N ++N  CK ++++   + L   E+ G  P + +Y+ LI+ 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R    +EA+     M  + ++P V  Y  +I GL + GK   A  +L +M + G+ PD
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN L+   C    +  A  +  E+  +  +P+  +F+ LI  + +NG +D A K F 
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M+ AG  P   ++  LI G C+ G + +A  +  +M           L QG   V D  
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM-----------LEQGC--VLDVV 308

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++   C   ++ +A ++  ++ E G  PD  T+ +LING+ K GN+N A+ LF+ +
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             + L+PD VTY TLI+G  +    E    ++  M      P+   Y  L+   C     
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428

Query: 583 SLAFSLWLQYLRD------------ISG--RDDESMKSIEEFLQ----KGEVENA----- 619
           S AF LW + +              + G  R   ++K+ +EFL     KG V +      
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA-DEFLSNMLLKGIVPDGITYNT 487

Query: 620 -IQGLLE---MD------FKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I G ++   MD       K+ +  L P    Y + L G  + G+++EA  I   ++E  
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
                 +   LI+G   +  L  A  V    L+ GF+
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFV 584



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 209/430 (48%), Gaps = 15/430 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K   +      LDE+    +S  +  + +L+    +  +   A   F +M  
Sbjct: 171 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 230

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD+  ++A++ +  +      AL  + +M      P+ V +++LI G  ++G    
Sbjct: 231 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 290

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ DEM ++G + +  TY  +++GLC+     EA  LF +M + G  PDF  +  L+N
Sbjct: 291 ALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 350

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+ K   +++A+ L     +    P + +Y+ LIDG  +    ++    +  M   +I P
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + + YG++I G    G V +A +L  +M E+G        N ++KG+C  G   +A    
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +  +P+  T+  LI G  +   +D A  L NKME +G  P V  +N +++G  + 
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 530

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A L+  KM E G NP              D+++  +++  + T   + +A+++  
Sbjct: 531 GRMQEAELIMLKMIERGVNP--------------DRSTYTSLINGHVTQNNLKEAFRVHD 576

Query: 486 QLAESGNLPD 495
           ++ + G +PD
Sbjct: 577 EMLQRGFVPD 586



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 177/363 (48%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F     +  +    S SA+I +L K    D   +   ++++  ++  + ++ +LI G+
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            + G   +AL+   +M E  C  DV  YN +LN   ++++   A  ++ EM +    P+ 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF+ LING SK G    A+ + + M QR + P+  TY  +I G C+ +  ++   L+  
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M      P+ ++Y  L+NG+C +  V EA  L     + GF   + + + ++ G  RA  
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             +A  +   M  + I PD + Y  +I G  +   +  A  L++ M   G++PD   YN 
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 522

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++ GF   G + +A  + +++ +R   P+  T+T LI G      + +A ++ ++M + G
Sbjct: 523 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582

Query: 409 CFP 411
             P
Sbjct: 583 FVP 585


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 278/570 (48%), Gaps = 20/570 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S   + A +  L      D     L E+R   V+   D     I  + + G  ++AL++F
Sbjct: 50  SARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTF 109

Query: 122 GKMKEFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            +  +  C+ P V +YN +L+   R+ +    + VY  M K    PN+ T++LLI  L +
Sbjct: 110 YRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQ 169

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           + + + A KMLDEM+++G  P++ ++  ++SG+C++ R +EA R FL    +   P   +
Sbjct: 170 NDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA-RGFL----AETVPVQAS 224

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YNA+++  C   R+ E  +++    + G  P + +Y+ ++D   +A+    A A   +M 
Sbjct: 225 YNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMV 284

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
                P+V+ +  +++G  E GKV DA+ +   M + G  P T  YN LI+G C +G L 
Sbjct: 285 SMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLK 344

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A      + +   LPN  T++ L+ G    G +D A  ++N+M+ +GC P+V ++  +I
Sbjct: 345 GALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMI 404

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           D LCK    ++A  L  KM +   P              +  +  T++ + C  G + +A
Sbjct: 405 DVLCKKMMFDQAESLIDKMLMDNCPP-------------NTVTFNTLIGRLCDCGRVGRA 451

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +   +  +G  P+  TYN L++G  + GN   A  +  E+   G     VTY T+IN 
Sbjct: 452 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           L ++   + A  + G+M   G  P    + +++   C+  K S+A  L  Q       R+
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571

Query: 601 DESMKS-IEEFLQKGEVENAIQGLLEMDFK 629
             +    I E   +G++ NA+  LL+M ++
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYE 601



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 230/571 (40%), Gaps = 100/571 (17%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC-SP 236
           L+ +G  +     L EM  RG+   +      I    +   AD A + F +  D GC  P
Sbjct: 61  LAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 120

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               YN LL+            ALLR       VP                        Y
Sbjct: 121 GVRVYNHLLD------------ALLRENMVGAVVP-----------------------VY 145

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M +  ++P+V  Y ++IR L +  +V  A K+L +M  +G  PD   +  ++ G C L
Sbjct: 146 DNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKL 205

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +++AR    E     ++P   ++  ++  +C    + +   + N+M + G  P+V  +
Sbjct: 206 GRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTY 260

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
             ++D  CKA EL  A  +  +M  +G  P +               +   +V+ +   G
Sbjct: 261 TTIVDAFCKARELRMACAILARMVSMGCTPNVL--------------TFTALVKGFFEDG 306

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +H A  +   + + G  P  I+YN LI G C +G++ GAL  F  ++   L P++ TY 
Sbjct: 307 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 366

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           TL++G       + A  I+ +M  +GC P+  VY +++   C++  F  A SL  + L D
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 426

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI---WLIG-LCQDGQV 651
                                                    P T+    LIG LC  G+V
Sbjct: 427 --------------------------------------NCPPNTVTFNTLIGRLCDCGRV 448

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             ALN+F  +          +  +L+HGL + G    A  + +  L NGF L     N +
Sbjct: 449 GRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTV 508

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +  L   +   + HA  LL RM   G   DA
Sbjct: 509 INCL--CQMCMRKHAMLLLGRMMVQGIQPDA 537



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 179/399 (44%), Gaps = 15/399 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M +   QP+V  Y  +++   + +   +A A+   MV + C PN++TF+ L+ G  + G
Sbjct: 247 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 306

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+ M   M   G  P+  +Y ++I GLC I     A   F  MK +   P+   Y+
Sbjct: 307 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 366

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++GF     +D A+ +    +  G  P +  Y+ +ID L +   +D+A +   KM  +
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 426

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+ V +  +I  L + G+V  A+ +   MR  G  P+   YN L+ G    G    A
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            ++ +E+       +  T+  +I  +C+  M   A  L  +M   G  P    FNA+I  
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            CK G++  A  L  +M     P              +  +   ++ + C  G +  A  
Sbjct: 547 YCKEGKVSIAACLLGQMNAVNCP-------------RNVVAYTILISELCNQGKLSNAMV 593

Query: 483 ILMQLAESGNLPDIITYNSLING-FCKVGNINGALKLFK 520
            L+++   G  P+  T+N L+   F  +G I G + LFK
Sbjct: 594 YLLKMLYEGICPNEATWNVLVRAIFTNIGTI-GPIHLFK 631



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  +  L+ G+   GD + A+  + +MK   C+P+V +Y  ++++  +K +F  A ++  
Sbjct: 362 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 421

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M+  NC PN VTF+ LI  L   G+   A+ +   M + G  PN  TY  ++ GL +  
Sbjct: 422 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 481

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              +A+ + ++M ++G     V YN ++N  C++     A+ LL      G  P   +++
Sbjct: 482 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 541

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +I    +  +   A     +M       +VV Y ++I  L   GK+ +AM  L  M   
Sbjct: 542 AIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE 601

Query: 338 GIVPDTYCYNALIKG-FCDLGLL 359
           GI P+   +N L++  F ++G +
Sbjct: 602 GICPNEATWNVLVRAIFTNIGTI 624



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 190/473 (40%), Gaps = 67/473 (14%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA------------ 362
           +R L+ AG V      L +MR RG+        A I  F   G  D+A            
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 363 RSLQVEIWKR--DSL----------------------PNTHTFTILICGMCRNGMVDDAQ 398
           R   V ++    D+L                      PN +T+ +LI  +C+N  VD A+
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           K+ ++M + GC P       ++ G+CK G +E+A     +                   V
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET------------------V 219

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
             +AS   +V   C    + + + ++ ++ + G  P+++TY ++++ FCK   +  A  +
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAI 279

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +   G  P+ +T+  L+ G     +  DA  ++  M   G  PS   Y  L+   C 
Sbjct: 280 LARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCC 339

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
                 A   +    R+    +  +  + ++ F   G+++ A+    EM        +  
Sbjct: 340 IGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVV 399

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDV 692
           YT  +  LC+     +A ++   ++   C     PP+ V    LI  LC  G +  A++V
Sbjct: 400 YTNMIDVLCKKMMFDQAESLIDKMLMDNC-----PPNTVTFNTLIGRLCDCGRVGRALNV 454

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           F    +NG     R  N LL   LF + N K  A+ ++  M + G++L    Y
Sbjct: 455 FHGMRRNGCHPNDRTYNELLHG-LFREGNHK-DAFAMVIEMLNNGFELSLVTY 505



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I +L K   FD     +D++   N    +  F  LI      G   +AL  F  M+   
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+   YN +L+  FR+     A A+  EM+      ++VT++ +IN L +    + A+
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L  M  +GI P+ FT+  +I   C+  +   A  L  +M    C  + VAY  L++  
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           C   ++  A+  L     +G  P   +++ L+  +F
Sbjct: 583 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 284/592 (47%), Gaps = 51/592 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSK 180
           +M +  C P+V+ YN +L     +     AL +   M     +C P++V+++ +ING  K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A     EM  RGILPN  TY+ +I+ LC+    D+A  +   M  +G  P+   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN++++G+C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  ++P++  YG +++G +  G + +   LL  M   GI P+ Y ++ LI  +   G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           QA  +  ++ ++   P+T T+  +I  +C++G V+DA + F +M      P   ++N+LI
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             LC   + +KA  L  +M           L +G     D     ++++ +C  G + ++
Sbjct: 452 HSLCIFDKWDKAKELILEM-----------LDRG--ICLDTIFFNSIIDSHCKEGRVIES 498

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   +   G  PDIITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++          
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV---------- 608

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                        G  E+  Q            +L+ Y I L GLC++    EAL +F  
Sbjct: 609 -------------GITESGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L      +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 694



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 268/617 (43%), Gaps = 90/617 (14%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKE--FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + +L+ G       ++ALE    M +   DC PDV  Y  V+N  F++     A   Y+E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+    LPN+VT+S +I  L K+   + A+++L  M + G++PN  TY  ++ G C   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA     KM   G  PD V YN+L++  CK  R  EA  +  S  K G  P + +Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 279 LIDGLF-----------------------------------RAKRYDEAYAWYRKMFEEK 303
           L+ G                                     +  + D+A   + KM ++ 
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD V YG +I  L ++G+V+DAM+    M +  + P    YN+LI   C     D+A+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L +E+  R    +T  F  +I   C+ G V +++KLF+ M + G  P +  ++ LIDG 
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C AG++++A  L   M  +G  P              D  +  T++  YC    +  A  
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKP--------------DCVTYNTLINGYCKISRMEDALV 570

Query: 483 ILMQLAESGNLPDII-----------------------------------TYNSLINGFC 507
           +  ++  SG  PDII                                   TYN +++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K    + AL++F+ L L  L+ ++ T+  +I  L +V R ++A  +F  +  NG  P   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            Y SLM  +   +            + +     +  M +  + + LQ+G++  A   L  
Sbjct: 691 TY-SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749

Query: 626 MDFKLNDFQLAPYTIWL 642
           +D K    + +  +++L
Sbjct: 750 IDEKHFSLEASTASLFL 766



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 240/545 (44%), Gaps = 13/545 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L +  + S++I+ L K    D   + L  
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM     +PDV  YN++++   +   
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P I T+  L+ G +  G       +LD M + GI PN + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +PD V Y  ++   CK  RV++A+        + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI  L    ++D+A     +M +  I  D + +  +I    + G+V ++ 
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   Y+ LI G+C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 607

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 608 VGITESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           VG  + A  LF  L   GL PD  TY  +   L      E+   +F  M +NGCT +  +
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 726

Query: 569 YKSLM 573
             S++
Sbjct: 727 LNSIV 731



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 255/573 (44%), Gaps = 68/573 (11%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P+   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 242 -----------------------------------NALLNGFCKLRRVDEALAL-LRSFE 265
                                                LL G C  +R  +A+ + LR   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGK 323
           + G +P + SY+ L+ GL    R  EA    + M ++  +  PDVV Y  +I G  + G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A     +M +RGI+P+   Y+++I   C    +D+A  +   + K   +PN  T+  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           ++ G C +G   +A     KM   G  P V  +N+L+D LCK G   +A  +F  M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P +               +  T+++ Y T G + + + +L  +  +G  P+   ++ L
Sbjct: 335 LKPEI--------------TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I  + K G ++ A+ +F +++ +GL PD+VTYGT+I  L +  R EDA R F QM     
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQ 621
           +P   VY SL+   C   K+  A  L L+ L      D     S I+   ++G V  + +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES-E 499

Query: 622 GLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLI 677
            L ++  ++     +  Y+  + G C  G++ EA  + + +V   ++   P CV    LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV---SVGMKPDCVTYNTLI 556

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +G CK   ++ A+ +F     +G  + P +  Y
Sbjct: 557 NGYCKISRMEDALVLFREMESSG--VSPDIITY 587



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 41/397 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y K G  ++A+  F KM++    PD   Y  V+ I  +      A+  + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 160 VKLNCLPNIVTFSLLINGLS-----------------------------------KSGKT 184
           +     P  + ++ LI+ L                                    K G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             + K+ D M + G+ P+  TY+ +I G C   + DEA +L   M   G  PD V YN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK+ R+++AL L R  E  G  P + +Y+ ++ GLF+ +R   A   Y  + E   
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           + ++  Y +++ GL +     +A+++  ++    +  +T  +N +I     +G  D+A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +     +P+  T++++   +   G++++   LF  ME+ GC  +  M N+++  L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 425 KAGELEKANLLFYKME------IGKNPTLFLRLSQGG 455
           + G++ +A    + ++           +LFL L  GG
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGG 772



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 214/473 (45%), Gaps = 46/473 (9%)

Query: 292 AYAWYRKMFE---EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           A + Y +M     +++ P++  YG++I     AG++      L ++ ++G   D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 349 LIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           L+KG C     D+  S  ++I  R       +PN  ++ IL+ G+C      +A +L   
Sbjct: 132 LLKGLC----ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 404 MEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHD 460
           M   G  C P V  +  +I+G  K G+L+KA   +++M + G  P +             
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV------------- 234

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++   C A  + KA ++L  + ++G +P+  TYNS+++G+C  G    A+   K
Sbjct: 235 -VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           ++   G+ PD VTY +L++ L +  R  +A ++F  M + G  P    Y +L+     + 
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS------IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                  + +  L D+  R+            I  + ++G+V+ A+    +M  +  +  
Sbjct: 354 AL-----VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDV 692
              Y   +  LC+ G+V++A+  F  +++ +  ++P + V   LIH LC     D A ++
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L  L  G  L     N ++ S    K+ + + +  L   M  +G   D   Y
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDS--HCKEGRVIESEKLFDLMVRIGVKPDIITY 517


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 182/665 (27%), Positives = 304/665 (45%), Gaps = 58/665 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY +  D E+A   F  M     + +   Y  +++          AL  +  M +  
Sbjct: 230 LVLGYCRNDDVERACGVFCVMP----RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDG 285

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P + T+++L+  L +SG+   A+ +  EM +RG  PN +TYT++I  LC+  R DEA 
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++  +M + G +P  V +NAL+  +CK   +++A+ +L   E     P + +Y+ LI G 
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R K  D A A   KM E K+ PDVV Y  +I GL E G V  A +L   M   G  PD 
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQ 465

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + +NA +   C +G + +A  +   + ++    N H +T LI G C+ G ++ A  LF +
Sbjct: 466 WTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKR 525

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--------------- 447
           M    C P+   FN +IDGL K G+++ A LL   M +    PTL               
Sbjct: 526 MLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYD 585

Query: 448 FLRLSQGGNRV------HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           F R ++  NR+       +  +    ++ YC+ G + +A ++++++   G L D   YN 
Sbjct: 586 FDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNL 645

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ------------------- 542
           LIN +  +G ++ A  + + +   G  P  +TY  L+  L                    
Sbjct: 646 LINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLT 705

Query: 543 --RVDREEDAFRI--------FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
              VD  +   +I        F +M + GC P+   Y  L+   C+  + ++AFSL+  +
Sbjct: 706 NISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLY-HH 764

Query: 593 LRD--ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           +R+  IS  +      +    + G    A+  L  M    +   L  Y + + GL +   
Sbjct: 765 MREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMN 824

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++A  +F  L+ C       +   LI GL K GY+D   ++     KNG  L P   + 
Sbjct: 825 KEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSM 884

Query: 711 LLRSL 715
           L++ L
Sbjct: 885 LMQEL 889



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 270/592 (45%), Gaps = 54/592 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+    + G   +AL  FG+M+E  C+P+VY Y  +++   ++     AL +  EM
Sbjct: 292 TYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEM 351

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P++V F+ LI    K G  E A+ +L  M  + + PN  TY  +I G C+    
Sbjct: 352 VEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSM 411

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP-------- 271
           D A  L  KM +S  SPD V YN L++G C++  VD A  L R   +DGF P        
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAF 471

Query: 272 -----RLG----------------------SYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
                R+G                      +Y+ LIDG  +A + + A + +++M  E+ 
Sbjct: 472 MVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+ + + VMI GL + GKV+DAM L+ DM +  + P  + YN L++        D+A  
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +   +      PN  T+T  I   C  G +++A+++  K++  G      ++N LI+   
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLS-------------QGGNRVHDKASLQTM-VE 469
             G L+ A  +  +M   G  P+ +L  S             +G N V    SL  + V+
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPS-YLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD 710

Query: 470 QYCTAGLIHKAYKILM--QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
                  I      ++  ++AE G +P++ TY+ LING CKVG +N A  L+  ++  G+
Sbjct: 711 NTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGI 770

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P  + + +L++   ++    +A  +   M +         YK L+     +     A +
Sbjct: 771 SPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEA 830

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
           ++   LR     D+ + K + + L K    +    LL +  K N  +L P T
Sbjct: 831 VFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEK-NGCRLHPET 881



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 251/572 (43%), Gaps = 79/572 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D   + L+E+    V+     F  LI  Y K G  E A+   G M+ 
Sbjct: 329 TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMES 388

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  YN ++    R +    A+A+  +MV+    P++VT++ LI+GL + G  + 
Sbjct: 389 KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++   M + G  P+++T+   +  LC++ R  EA+++   +K+     +  AY AL++
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508

Query: 247 GFCKLRRVDEALALLR-------------------SFEKDGFV----------------P 271
           G+CK  +++ A +L +                      K+G V                P
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L +Y+ L++ + +   +D A     ++     +P+VV Y   I+     G++++A +++
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMV 628

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC-- 389
             ++  G++ D++ YN LI  +  +GLLD A  +   ++     P+  T++IL+  +   
Sbjct: 629 IKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIE 688

Query: 390 ----------------RNGMVDDAQ-----------KLFNKMEKAGCFPSVGMFNALIDG 422
                            N  VD+              LF KM + GC P++  ++ LI+G
Sbjct: 689 KHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLING 748

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LCK G L  A  L++ M E G +P+  +                +++   C  G+  +A 
Sbjct: 749 LCKVGRLNVAFSLYHHMREGGISPSEIIH--------------NSLLSSCCKLGMFGEAV 794

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  + E  +L  + +Y  LI G  +  N   A  +F  L   G   D V +  LI+GL
Sbjct: 795 TLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL 854

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +    +    +   M +NGC   P  Y  LM
Sbjct: 855 AKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 269/585 (45%), Gaps = 30/585 (5%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           ++++L +  R +    A  V   M+K    P+  TF  L+N L +      A    D   
Sbjct: 89  HHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF--LLNLLRR---MNTAAAAADHQH 143

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCS--PDFVAYNALLNGFCKLR 252
           Q     +  +Y  ++  L + +  DE   L+ +M  D+G S  P+ +  N +LN +CKL 
Sbjct: 144 QLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLG 203

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +  A        +    P L +Y+ L+ G  R    + A   +  M       + V Y 
Sbjct: 204 NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYT 259

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I GL EAGK+ +A++  + MRE G  P    Y  L+   C+ G   +A SL  E+ +R
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN +T+T+LI  +C+ G +D+A K+ N+M + G  PSV  FNALI   CK G +E A
Sbjct: 320 GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDA 379

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                   +G      L L +      +  +   ++  +C    + +A  +L ++ ES  
Sbjct: 380 --------VG-----VLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD++TYN+LI+G C+VG ++ A +LF+ +   G  PD  T+   +  L R+ R  +A +
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           I   + +     +   Y +L+   C+  K   A SL+ + L +    +  +   + + L+
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 613 K-GEVENAIQGLLEMDFKLNDFQ--LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           K G+V++A+  LL  D    D +  L  Y I +  + ++     A  I + L+       
Sbjct: 547 KEGKVQDAM--LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +    I   C +G L+ A ++ +     G +L   + N L+ +
Sbjct: 605 VVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINA 649



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 166/407 (40%), Gaps = 64/407 (15%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L+ L+  +V      +  LI GY K G  E A   F +M   +C P+   +N +++  
Sbjct: 486 QILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGL 545

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++     A+ +  +M K +  P + T+++L+  + K    + A ++L+ +   G  PN 
Sbjct: 546 RKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNV 605

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT  I   C   R +EA  + +K+K+ G   D   YN L+N +  +  +D A  +LR 
Sbjct: 606 VTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRR 665

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKR------------------YDEAYAW---------- 295
               G  P   +YS L+  L   K                    D    W          
Sbjct: 666 MFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTV 725

Query: 296 -YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM E    P++  Y  +I GL + G++  A  L   MRE GI P    +N+L+   C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM-------------------------- 388
            LG+  +A +L   + +   L +  ++ +LICG+                          
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845

Query: 389 ---------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
                     + G VD   +L N MEK GC      ++ L+  L +A
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNRA 892



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/493 (23%), Positives = 212/493 (43%), Gaps = 61/493 (12%)

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDM---RERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           Y  ++  LS    V + + L  +M       + P+    N ++  +C LG +  AR   V
Sbjct: 154 YNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFV 213

Query: 368 EIWKRDSLPNTHTFTILICGMCRN-------------------------------GMVDD 396
            I + +  P+  T+T L+ G CRN                               G + +
Sbjct: 214 RILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHE 273

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNPTLFL------ 449
           A + + +M + GCFP+V  +  L+  LC++G ELE  +L     E G  P ++       
Sbjct: 274 ALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLID 333

Query: 450 RLSQGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLP 494
            L + G        L  MVE+               YC  G++  A  +L  +      P
Sbjct: 334 YLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCP 393

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++ TYN LI GFC+  +++ A+ L  ++    L PD VTY TLI+GL  V   + A R+F
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLF 453

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQ 612
             M ++G +P    + + M   CR  +   A  + L+ L++   + +E   +  I+ + +
Sbjct: 454 RLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI-LESLKEKHVKANEHAYTALIDGYCK 512

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G++E+A      M  +        + + + GL ++G+V++A+ +   + +     T  +
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHT 572

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              L+  + K    D A ++    + +G+  +P V  Y      +    +   A  ++ +
Sbjct: 573 YNILVEEVLKEYDFDRANEILNRLISSGY--QPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 733 MKSVGYDLDACLY 745
           +K+ G  LD+ +Y
Sbjct: 631 IKNEGVLLDSFIY 643


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 193/725 (26%), Positives = 326/725 (44%), Gaps = 45/725 (6%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIM-----KTKNPQVGFRFFIWAAKRKR 59
           + + + I+ T T  + ALE  + F    T  S I      +  +P++G  FF WA+K+  
Sbjct: 32  VKDTIRIIKTETLWQEALE--IRFSETDTRVSEIAHFVFDQIHDPRLGLNFFEWASKQST 89

Query: 60  LRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           L +       S+++ +L +   F      L+ ++S  +    +    +IS Y   G  ++
Sbjct: 90  LSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKE 149

Query: 117 ALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           ALE +  + +  +C PDV+  N++LN+        +A  VY EMV  N   +  T  ++ 
Sbjct: 150 ALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVT 209

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL K GK E    ++++   +G +PN   Y  +I G C+    + A  LF ++K  G  
Sbjct: 210 KGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFL 269

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    Y A++N FCK  + +    LL   ++ G    L  ++ +ID  F+     EA   
Sbjct: 270 PTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADA 329

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            R M E   EPD+  Y  +I G    GKV++A +LL     RG+ P+ + Y  LI  F  
Sbjct: 330 VRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSK 389

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G   +A  L +E+ +R    +   +  L+ G+   G VD A  + +KM + G  P   +
Sbjct: 390 NGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANI 449

Query: 416 FNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLSQGGNRVHDKASLQ--- 465
           +N L+ GLCK G    A  L  +M       +   N TL     + GN    K   Q   
Sbjct: 450 YNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTI 509

Query: 466 ------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                        M++ YC  G+++ A     ++    + PD  TY+++I+G+ K  ++ 
Sbjct: 510 ERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLR 569

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           GAL++F  +  K  +P+ VT+ +LING  R      A ++F +M   G  P+   Y  L+
Sbjct: 570 GALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILI 629

Query: 574 TWSCRRRKFSLAFSLWLQYLRD------------ISGRDDESMKSIEEFLQKGEVENAIQ 621
            + C+  K + A   + Q L +            ++G  + +  +I       +    ++
Sbjct: 630 GYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLE 689

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
               M     D+++A Y   L+ LCQ   VK AL +   ++       P S + L+HGLC
Sbjct: 690 FFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLC 749

Query: 682 KRGYL 686
             G L
Sbjct: 750 LEGRL 754



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 239/547 (43%), Gaps = 33/547 (6%)

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGF 248
           +L+ M  + ++P     + VIS         EA  L+  + D   C PD  A N+LLN  
Sbjct: 118 LLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLL 177

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYS----CLI-DGLFRAKRYDEAYAWYRKMFEEK 303
               +V+ A  +      D  V R G       C++  GL +  + +E      K + + 
Sbjct: 178 VHHGKVEIARKVY-----DEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKG 232

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P++V Y  +I G  + G ++ A  L  +++ +G +P    Y A+I  FC  G  +   
Sbjct: 233 CVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVD 292

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L VE+ +R    +   F  +I    ++G   +A      M ++GC P +  +N LI+G 
Sbjct: 293 KLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGS 352

Query: 424 CKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C  G++ +A  LL + +  G  P  F              S   ++  +   G   +A +
Sbjct: 353 CSKGKVREAEELLEHAIRRGLFPNKF--------------SYTPLIHAFSKNGEYVRASE 398

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L++++E G+  D+I Y +L++G    G ++ AL +  ++  +G+ PD+  Y  L++GL 
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDISGRDD 601
           +  R   A ++  +M     TP   V  +L+    R      A  L+ L   R I     
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVV 518

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           E    I+ + + G + +A+     M   ++      Y+  + G  +   ++ AL +F ++
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578

Query: 662 VE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           ++  CK  V   +   LI+G C+ G L+ A  VF      GF   P V  Y +    F K
Sbjct: 579 LKKTCKPNVV--TFTSLINGFCRNGDLNRAEKVFEEMRSFGF--EPNVVTYTILIGYFCK 634

Query: 720 DNKKVHA 726
           + K   A
Sbjct: 635 EGKLTKA 641



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 194/491 (39%), Gaps = 118/491 (24%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE-KAL 118
           L +  +  A+I+   K   F+   + L E++   ++V   +F  +I   +K G CE +A 
Sbjct: 269 LPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHG-CEIEAA 327

Query: 119 ESFGKMKEFDCQPDVYIYNAVLN----------------IAFRKQLF------------- 149
           ++   M E  C+PD+  YN ++N                 A R+ LF             
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAF 387

Query: 150 ------LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                 + A  +  EM +     +++ +  L++GL  +G+ +VA+ + D+M +RGILP+ 
Sbjct: 388 SKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDA 447

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD-------------------------- 237
             Y +++SGLC+  R   A +L ++M D   +PD                          
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 238 ---------FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
                     V  NA++ G+CK   +++AL   +        P   +YS +IDG  +   
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
              A   +  M ++  +P+VV +  +I G    G +  A K+  +MR  G  P+   Y  
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTI 627

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM-------------------- 388
           LI  FC  G L +A     ++     +PN  TF  L+ G+                    
Sbjct: 628 LIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLT 687

Query: 389 --------------------------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
                                     C++ MV  A +L +KM   G  P    F AL+ G
Sbjct: 688 LEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHG 747

Query: 423 LCKAGELEKAN 433
           LC  G L+  N
Sbjct: 748 LCLEGRLQDWN 758


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 269/546 (49%), Gaps = 28/546 (5%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYW 83
           F SKTT++        P   F+         ++ S+ S  +    L++       F   +
Sbjct: 31  FRSKTTLSPYESDAPIPDQIFK------SASQMGSYKSGDSTFYSLIENYANSGDFGTLF 84

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNI 142
           Q  D ++      +   F ++   Y K    EKA+E FG+M  EF C+  V  +N+VLN+
Sbjct: 85  QVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNV 144

Query: 143 AFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
             ++ LF  AL  Y   V  K N  PN+++F+L+I  + K G  + AI++  EM  +   
Sbjct: 145 IIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCE 204

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY  ++ GLC+ +R DEA  L  +M+  GC P  V +N L+NG CK   +     L
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKL 264

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           + +    G VP   +Y+ +I+GL    + D+A +   +M   K  P+ V YG +I GL +
Sbjct: 265 VDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 324

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+  D + LLS + ERG   + Y Y+ LI G       ++A  L  ++ ++   PN   
Sbjct: 325 QGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 384

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           ++ LI G+CR G +D+A+++  +M   GC P+   +++LI G  K G  +KA +  +K E
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA-IRVWK-E 442

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           + KN           N V ++     ++   C  G + +A  +   +   G  PD++ Y+
Sbjct: 443 MAKN-----------NCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYS 491

Query: 501 SLINGFCKVGNINGALKLFKEL--QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           S+I+G C  G++   LKLF E+  Q    +PD VTY  L+  L + +    A  +   M 
Sbjct: 492 SMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSML 551

Query: 559 QNGCTP 564
             GC P
Sbjct: 552 DRGCNP 557



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 248/488 (50%), Gaps = 51/488 (10%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDC 114
           R+ +RSF S   V++++++   F    +  +    G  ++  +V  F ++I    K+G  
Sbjct: 132 RRTVRSFNS---VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 188

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++A+E F +M    C+PDV+ Y  +++   ++     A+ +  EM    C P+ VTF++L
Sbjct: 189 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           INGL K G      K++D M  +G +PN+ TY  +I+GLC   + D+A  L  +M  S C
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 308

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG  K  R  + + LL S E+ G      +YS LI GLF+ ++ +EA  
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            ++KM E+  +P++V+Y  +I GL   GK+ +A ++L +M  +G  P+ + Y++LIKGF 
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 428

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G   +A  +  E+ K + +PN   +++LI G+C +G + +A  ++  M   G  P V 
Sbjct: 429 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 488

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++++I GLC AG +E    LF +M           L Q                     
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEM-----------LCQ--------------------- 516

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                         ES + PD++TYN L+   CK  +I+ A+ L   +  +G  PD +T 
Sbjct: 517 --------------ESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITC 562

Query: 535 GTLINGLQ 542
              +N L+
Sbjct: 563 NIFLNALR 570



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 202/406 (49%), Gaps = 18/406 (4%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C LGL+D+A  +  E+  +   P+  T+  L+ G+C+   +D+A 
Sbjct: 168 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  GCFPS   FN LI+GLCK G++ +   L   M        FL+       V
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM--------FLK-----GCV 274

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +  T++   C  G + KA  +L ++  S  +P+ +TY +LING  K G     + L
Sbjct: 275 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 334

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              L+ +G   +   Y TLI+GL + ++ E+A  ++ +M + GC P+  VY +L+   CR
Sbjct: 335 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 394

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K   A  +  + +      +  +  S I+ F + G  + AI+   EM           
Sbjct: 395 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 454

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y++ + GLC+DG+++EA+ +++ ++         +   +IHGLC  G +++ + +F   L
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514

Query: 698 KNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
                 +P V  Y  LLR+L   K N   HA  LL  M   G + D
Sbjct: 515 CQESDSQPDVVTYNILLRAL--CKQNSISHAIDLLNSMLDRGCNPD 558



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 226/500 (45%), Gaps = 19/500 (3%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF  LI   + SG      ++ D M +   +  +  + +V     + +  ++A  LF +M
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 230 KDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKDGFVPRLGSYSCLIDGLFRA 286
            D   C     ++N++LN   +      AL         K    P + S++ +I  + + 
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              D A   +R+M  +K EPDV  Y  ++ GL +  ++ +A+ LL +M+  G  P +  +
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N LI G C  G + +   L   ++ +  +PN  T+  +I G+C  G +D A  L ++M  
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
           + C P+   +  LI+GL K G       L   +E            + G+  ++ A   T
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE------------ERGHHANEYA-YST 352

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++          +A  +  ++ E G  P+I+ Y++LI+G C+ G ++ A ++  E+  KG
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             P++ TY +LI G  +    + A R++ +M +N C P+   Y  L+   C   K   A 
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLI 643
            +W   L      D  +  S I      G VE  ++   EM  + +D Q  +  Y I L 
Sbjct: 473 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 532

Query: 644 GLCQDGQVKEALNIFSVLVE 663
            LC+   +  A+++ + +++
Sbjct: 533 ALCKQNSISHAIDLLNSMLD 552



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 17/310 (5%)

Query: 395 DDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           + A +LF +M ++  C  +V  FN++++ + + G   +A L FY+  +G           
Sbjct: 116 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA-LEFYECGVGGKT-------- 166

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   +  S   +++  C  GL+ +A ++  ++A     PD+ TY +L++G CK   I+
Sbjct: 167 --NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+ L  E+Q++G  P SVT+  LINGL +        ++   M   GC P+   Y +++
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLND 632
              C + K   A SL  + +      +D +  + I   +++G   + +  L  ++ + + 
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                Y+  + GL ++ + +EA+ ++  +VE  C+  +   S   LI GLC+ G LD A 
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYS--ALIDGLCREGKLDEAK 402

Query: 691 DVFLYTLKNG 700
           ++    +  G
Sbjct: 403 EILCEMVNKG 412



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 23/135 (17%)

Query: 104 LISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           +I G    G  E  L+ F +M  +E D QPDV  YN +L    ++     A+ +   M+ 
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552

Query: 162 LNCLPNIVTFSLLINGL---------------------SKSGKTEVAIKMLDEMTQRGIL 200
             C P+++T ++ +N L                      K  +   A K+++ M Q+ + 
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 612

Query: 201 PNKFTYTIVISGLCQ 215
           PN  T+  +I  LC+
Sbjct: 613 PNASTWERIIPELCK 627


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 284/592 (47%), Gaps = 51/592 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSK 180
           +M +  C P+V+ YN +L     +     AL +   M     +C P++V+++ +ING  K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A     EM  RGILPN  TY+ +I+ LC+    D+A  +   M  +G  P+   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN++++G+C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  ++P++  YG +++G +  G + +   LL  M   GI P+ Y ++ LI  +   G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           QA  +  ++ ++   P+T T+  +I  +C++G V+DA + F +M      P   ++N+LI
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             LC   + +KA  L  +M           L +G     D     ++++ +C  G + ++
Sbjct: 452 HSLCIFDKWDKAKELILEM-----------LDRG--ICLDTIFFNSIIDSHCKEGRVIES 498

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   +   G  PDIITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++          
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV---------- 608

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                        G  E+  Q            +L+ Y I L GLC++    EAL +F  
Sbjct: 609 -------------GITESGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L      +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 694



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 268/617 (43%), Gaps = 90/617 (14%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKE--FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + +L+ G       ++ALE    M +   DC PDV  Y  V+N  F++     A   Y+E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+    LPN+VT+S +I  L K+   + A+++L  M + G++PN  TY  ++ G C   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA     KM   G  PD V YN+L++  CK  R  EA  +  S  K G  P + +Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 279 LIDGLF-----------------------------------RAKRYDEAYAWYRKMFEEK 303
           L+ G                                     +  + D+A   + KM ++ 
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD V YG +I  L ++G+V+DAM+    M +  + P    YN+LI   C     D+A+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L +E+  R    +T  F  +I   C+ G V +++KLF+ M + G  P +  ++ LIDG 
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C AG++++A  L   M  +G  P              D  +  T++  YC    +  A  
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKP--------------DCVTYNTLINGYCKISRMEDALV 570

Query: 483 ILMQLAESGNLPDII-----------------------------------TYNSLINGFC 507
           +  ++  SG  PDII                                   TYN +++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K    + AL++F+ L L  L+ ++ T+  +I  L +V R ++A  +F  +  NG  P   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            Y SLM  +   +            + +     +  M +  + + LQ+G++  A   L  
Sbjct: 691 TY-SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749

Query: 626 MDFKLNDFQLAPYTIWL 642
           +D K    + +  +++L
Sbjct: 750 IDEKHFSLEASTASLFL 766



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 240/545 (44%), Gaps = 13/545 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L +  + S++I+ L K    D   + L  
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM     +PDV  YN++++   +   
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P I T+  L+ G +  G       +LD M + GI PN + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +PD V Y  ++   CK  RV++A+        + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI  L    ++D+A     +M +  I  D + +  +I    + G+V ++ 
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   Y+ LI G+C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 607

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 608 VGITESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           VG  + A  LF  L   GL PD  TY  +   L      E+   +F  M +NGCT +  +
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 726

Query: 569 YKSLM 573
             S++
Sbjct: 727 LNSIV 731



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 255/573 (44%), Gaps = 68/573 (11%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P+   Y
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCTY 94

Query: 242 -----------------------------------NALLNGFCKLRRVDEALAL-LRSFE 265
                                                LL G C  +R  +A+ + LR   
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGK 323
           + G +P + SY+ L+ GL    R  EA    + M ++  +  PDVV Y  +I G  + G 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A     +M +RGI+P+   Y+++I   C    +D+A  +   + K   +PN  T+  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           ++ G C +G   +A     KM   G  P V  +N+L+D LCK G   +A  +F  M + G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P +               +  T+++ Y T G + + + +L  +  +G  P+   ++ L
Sbjct: 335 LKPEI--------------TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 380

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I  + K G ++ A+ +F +++ +GL PD+VTYGT+I  L +  R EDA R F QM     
Sbjct: 381 ICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERL 440

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQ 621
           +P   VY SL+   C   K+  A  L L+ L      D     S I+   ++G V  + +
Sbjct: 441 SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES-E 499

Query: 622 GLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLI 677
            L ++  ++     +  Y+  + G C  G++ EA  + + +V   ++   P CV    LI
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV---SVGMKPDCVTYNTLI 556

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +G CK   ++ A+ +F     +G  + P +  Y
Sbjct: 557 NGYCKISRMEDALVLFREMESSG--VSPDIITY 587



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 41/397 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y K G  ++A+  F KM++    PD   Y  V+ I  +      A+  + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 160 VKLNCLPNIVTFSLLINGLS-----------------------------------KSGKT 184
           +     P  + ++ LI+ L                                    K G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             + K+ D M + G+ P+  TY+ +I G C   + DEA +L   M   G  PD V YN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK+ R+++AL L R  E  G  P + +Y+ ++ GLF+ +R   A   Y  + E   
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           + ++  Y +++ GL +     +A+++  ++    +  +T  +N +I     +G  D+A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +     +P+  T++++   +   G++++   LF  ME+ GC  +  M N+++  L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 425 KAGELEKANLLFYKME------IGKNPTLFLRLSQGG 455
           + G++ +A    + ++           +LFL L  GG
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGG 772



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 214/473 (45%), Gaps = 46/473 (9%)

Query: 292 AYAWYRKMFE---EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           A + Y +M     +++ P++  YG++I     AG++      L ++ ++G   D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 349 LIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           L+KG C     D+  S  ++I  R       +PN  ++ IL+ G+C      +A +L   
Sbjct: 132 LLKGLC----ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 404 MEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHD 460
           M   G  C P V  +  +I+G  K G+L+KA   +++M + G  P +             
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV------------ 235

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++   C A  + KA ++L  + ++G +P+  TYNS+++G+C  G    A+   K
Sbjct: 236 --TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           ++   G+ PD VTY +L++ L +  R  +A ++F  M + G  P    Y +L+     + 
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS------IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                  + +  L D+  R+            I  + ++G+V+ A+    +M  +  +  
Sbjct: 354 AL-----VEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDV 692
              Y   +  LC+ G+V++A+  F  +++ +  ++P + V   LIH LC     D A ++
Sbjct: 409 TVTYGTVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L  L  G  L     N ++ S    K+ + + +  L   M  +G   D   Y
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDS--HCKEGRVIESEKLFDLMVRIGVKPDIITY 517


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 241/458 (52%), Gaps = 14/458 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+S + +    ++A + F       C PD   Y+ ++N   + + F  A  +  EM K  
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P+   ++ +I GL  +G+ + A+    +M QR   P+  TYTI++  LC+  R  +A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M ++GC+P+ V YN L+NGFCKL  +DEA+ L     ++   P + +Y+ LIDG 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + +R  +     ++M +   EP+ + Y  ++  L ++GK  DA  L   M  R   P  
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + +N +I  FC +G LD A  L   +  R  LP+ +T+ I+I G CR   +DDA++L  +
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M +AGC P V  +N+++ GLCKA ++++A  ++   E+ +N   FL          D  +
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY---EVLRNGGYFL----------DVVT 349

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C +  +  A K+L ++  +G+ PD++ Y  LI+GFCK   ++ +L  F E+ 
Sbjct: 350 CSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEML 409

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            KG  P  +TY  +I+ L +  R  D   +   M + G
Sbjct: 410 DKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 221/477 (46%), Gaps = 57/477 (11%)

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++S   +  +A EAY LF       CSPD + Y+ L+NGFCK R   +A  LL   EK G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP    Y+ +I GL    R D A   YR M +    P V+ Y +++  L ++ ++ DA 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +L DM E G  P+   YN LI GFC LG +D+A  L  ++ +    P+  T+ ILI G 
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEIGKNPTL 447
           C+     D  KL  +M K GC P+   +N L+D L K+G+ ++  NL    +     P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 448 F---------------------LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           F                      +L      + D  +   M+   C A  I  A ++L +
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + E+G  PD++TYNS+++G CK   ++ A ++++ L+  G   D VT  TLI+GL +  R
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            +DA ++  +M +NG  P    Y  L+   C+  +                   D+S+  
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL------------------DKSLAF 404

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
             E L KG V   I                 Y+I +  LC+  +V++   +   ++E
Sbjct: 405 FSEMLDKGCVPTVIT----------------YSIVIDKLCKSARVRDGCMLLKTMLE 445



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 218/432 (50%), Gaps = 30/432 (6%)

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           +CL+    R K+  EAY  ++        PD + Y  +I G  +A   + A +LL +M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RGIVP    YN +IKG CD G +D A  +     +R   P+  T+TIL+  +C++  + D
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQ 453
           A  +   M +AGC P+V  +N LI+G CK G +++A +LF +M E   +P +F    L  
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 454 G---GNRVHDKAS-LQTMVEQYCTAGLIHKAYKILM-QLAESG------NL--------- 493
           G     R  D A  LQ MV+  C    I   Y  LM  L +SG      NL         
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFI--TYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 494 -PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P   T+N +I+ FCKVG ++ A +LF+ +  +G  PD  TY  +I+G  R +R +DA +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEF 610
           +  +M + GC P    Y S+++  C+  +   A+ ++ + LR+     D    S  I+  
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY-EVLRNGGYFLDVVTCSTLIDGL 357

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +   +++A + L EM+   +   +  YTI + G C+  Q+ ++L  FS +++   + T 
Sbjct: 358 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 417

Query: 671 PSCVKLIHGLCK 682
            +   +I  LCK
Sbjct: 418 ITYSIVIDKLCK 429



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 21/348 (6%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P++ T++ LI G C+      A +L ++MEK G  P   ++N +I GLC  G ++ A + 
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           +  M+    P++               +   +V+  C +  I  A  IL  + E+G  P+
Sbjct: 91  YRDMQRHCAPSVI--------------TYTILVDALCKSARISDASLILEDMIEAGCAPN 136

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+LINGFCK+GN++ A+ LF ++      PD  TY  LI+G  + +R +D  ++  
Sbjct: 137 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 196

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKG 614
           +M + GC P+   Y +LM    +  K+  AF+L    L RD           I+ F + G
Sbjct: 197 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 256

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +++ A +    M  +     +  Y I + G C+  ++ +A  +   + E      PP  V
Sbjct: 257 QLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC---PPDVV 313

Query: 675 ---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
               ++ GLCK   +D A +V+      G+ L    C+ L+  L  S+
Sbjct: 314 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 240/476 (50%), Gaps = 13/476 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF +LI    ++   + A E F  MKE    P +  +NA+L++  +         +Y 
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM +L     + TF+++IN L K GK + A   +  M   G+ PN  TY  VI G C   
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R + A  +   MK+ G  PD   Y +L++G CK  +++EA  +L   ++ G +P   +Y+
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG        +A+ +  +M    I P V  Y ++I  L   GK+ +A  ++ DM + 
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GIVPD+  YN LI G+C  G   +A +L  E+  +   P   T+T LI  + +   +  A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF K+ + G  P + MFNALIDG C  G L++A  L  +M+               N 
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD-------------KRNI 512

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           V D+ +  T+++  C  G + +A ++L ++   G  PD I+YN+LI+G+ K G+IN A  
Sbjct: 513 VPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFT 572

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  E+   G  P  +TY  LI GL +  + + A  +  +M   G TP  + Y SL+
Sbjct: 573 IRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 247/527 (46%), Gaps = 26/527 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP----NGFDLYWQ 84
           L K T+ S +   K+      F   A  R RL +   +S V  ML++        D  ++
Sbjct: 135 LLKQTIESRVAGVKDV-----FHELAITRDRLGT--KSSIVFDMLIRACCELKRGDDAFE 187

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
             D ++   V    + F  ++S + K+   E     + +M     +  VY +N ++N+  
Sbjct: 188 CFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLC 247

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           ++     A      M  L   PN+VT++ +I+G    G+ E A  +LD M  RG+ P+ +
Sbjct: 248 KEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY 307

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY  +ISG+C+  + +EA  +  KMK+ G  P  V YN L++G+C    + +A       
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            +   +P + +Y+ LI  LF   + DEA    + M +  I PD + Y ++I G    G  
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           K A  L  +M  +GI P    Y +LI        +  A  L  +I +  + P+   F  L
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGK 443
           I G C NG +D A  L  +M+K    P    +N L+ G C+ G++E+A  L  +M+  G 
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGI 547

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              D  S  T++  Y   G I+ A+ I  ++   G  P ++TYN+LI
Sbjct: 548 RP--------------DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            G CK    + A +L KE+  KG+ PD  TY +LI G+ +VD   +A
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 22/467 (4%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + F +LI    +  + + A +  D M ++G++P   T+  ++S   ++N+ +  + L+ +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M           +N ++N  CK  ++ +A   + S E  G  P + +Y+ +I G     R
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A      M    +EPD   YG +I G+ + GK+++A  +L  M+E G++P    YN 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C+ G L +A   + E+ +R  LP   T+ +LI  +   G +D+A  +   M  +G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 409 CFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLS-----QGGNR----- 457
             P    +N LI+G C+ G  +KA NL    +  G  PTL    S        NR     
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 458 ------VHDKAS-----LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                 + + AS        +++ +C  G + +A+ +L ++ +   +PD +TYN+L+ G 
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G +  A +L KE++ +G+RPD ++Y TLI+G  +     DAF I  +M   G  P+ 
Sbjct: 527 CREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTL 586

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
             Y +L+   C+ ++  LA  L  + +      DD +  S+ E + K
Sbjct: 587 LTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 236/474 (49%), Gaps = 34/474 (7%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + ++ L+   C+L+R D+A       ++ G VP++ +++ ++    +  + +  +  Y +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           MF  KI+  V  + +MI  L + GK+K A   +  M   G+ P+   YN +I G+C  G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ AR +   +  R   P+++T+  LI GMC+ G +++A  +  KM++ G  P+   +N 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           LIDG C  G+L KA    Y+ E+ +    PT+              ++   ++      G
Sbjct: 347 LIDGYCNKGDLVKA--FGYRDEMVRRAILPTV--------------STYNLLIHALFLEG 390

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  ++  + +SG +PD ITYN LING+C+ GN   A  L  E+  KG++P  VTY 
Sbjct: 391 KMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYT 450

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +LI  L + +R + A  +F ++ + G +P   ++ +L+   C       AF+L    L++
Sbjct: 451 SLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL----LKE 506

Query: 596 ISGRD---DESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           +  R+   DE   +  ++   ++G+VE A + L EM  +        Y   + G  + G 
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566

Query: 651 VKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + +A   F++  E  +I   P+ +    LI GLCK    DLA ++    +  G 
Sbjct: 567 INDA---FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 177/348 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD +++  V   S  +  LISG  K G  E+A     KMKE    P    YN +++    
Sbjct: 294 LDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCN 353

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K   + A     EMV+   LP + T++LLI+ L   GK + A  M+ +M   GI+P+  T
Sbjct: 354 KGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSIT 413

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y I+I+G C+   A +A+ L  +M   G  P  V Y +L+    K  R+  A  L     
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++G  P L  ++ LIDG       D A+A  ++M +  I PD V Y  +++G    GKV+
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +LL +M+ RGI PD   YN LI G+   G ++ A +++ E+      P   T+  LI
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            G+C+N   D A++L  +M   G  P    + +LI+G+ K  +  +A+
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 178/654 (27%), Positives = 308/654 (47%), Gaps = 39/654 (5%)

Query: 12  LDTVTPIEPALEPLLPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVI 70
           L    P+  +L+P         +  V+MK K + ++   FF WA  R R  +  S   VI
Sbjct: 68  LRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR-RDSNLESLCIVI 126

Query: 71  SMLLKPNGFDLYWQTLD---ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            + +      +    +    E    NV+     FF L+   YK                 
Sbjct: 127 HLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK----------------- 169

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG-KTEV 186
           D   D  +++    +     L   A  V+ +M+    + ++ + ++ +  LSK   KT  
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  E  + G+  N  +Y IVI  +CQ+ R  EA+ L L M+  G +PD ++Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C+   +D+   L+   ++ G  P    Y  +I  L R  +  EA   + +M  + I P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V+Y  +I G  + G ++ A K   +M  R I PD   Y A+I GFC +G + +A  L 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E++ +   P++ TFT LI G C+ G + DA ++ N M +AGC P+V  +  LIDGLCK 
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G+L+ AN L ++M +IG  P +F              +  ++V   C +G I +A K++ 
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIF--------------TYNSIVNGLCKSGNIEEAVKLVG 515

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +   +G   D +TY +L++ +CK G ++ A ++ KE+  KGL+P  VT+  L+NG     
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
             ED  ++   M   G  P+   + SL+   C R     A +++        G D ++ +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           + ++   +   ++ A     EM  K     ++ Y++ + G  +  +  EA  +F
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 50/484 (10%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L EL+     V+S  +  +++GY + G+ +K  +    MK    +P+ YIY +++ +  R
Sbjct: 271 LMELKGYTPDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A   + EM++   LP+ V ++ LI+G  K G    A K   EM  R I P+  T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +ISG CQI    EA +LF +M   G  PD V +  L+NG+CK   + +A  +     
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + +Y+ LIDGL +    D A     +M++  ++P++  Y  ++ GL ++G ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+KL+ +    G+  DT  Y  L+  +C  G +D+A+ +  E+  +   P   TF +L+
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G C +GM++D +KL N M   G  P+   FN+L+   C    L+ A  ++  M      
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM------ 622

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                     C+ G+                 PD  TY +L+ G
Sbjct: 623 --------------------------CSRGV----------------GPDGKTYENLVKG 640

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK  N+  A  LF+E++ KG      TY  LI G  +  +  +A  +F QM + G    
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700

Query: 566 PAVY 569
             ++
Sbjct: 701 KEIF 704



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 19/377 (5%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +D   +   F +    +   G++ +A+++F KM   G   SV   N  +  L K      
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 228

Query: 432 ANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             ++ ++   E+G                 + AS   ++   C  G I +A+ +L+ +  
Sbjct: 229 TAIIVFREFPEVGV--------------CWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD+I+Y++++NG+C+ G ++   KL + ++ KGL+P+S  YG++I  L R+ +  +
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIE 608
           A   F +M + G  P   VY +L+   C+R     A   + + + RDI+         I 
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F Q G++  A +   EM  K  +     +T  + G C+ G +K+A  + + +++     
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   LI GLCK G LD A ++     K G  L+P +  Y        K      A  
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVK 512

Query: 729 LLCRMKSVGYDLDACLY 745
           L+   ++ G + D   Y
Sbjct: 513 LVGEFEAAGLNADTVTY 529



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +++G  K G+ E+A++  G+ +      D   Y  +++   +      A  +  EM+   
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P IVTF++L+NG    G  E   K+L+ M  +GI PN  T+  ++   C  N    A 
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            ++  M   G  PD   Y  L+ G CK R + EA  L +  +  GF   + +YS LI G 
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K++ EA   + +M  E +  D                 K+     SD + +G  PDT
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDT 719


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 195/763 (25%), Positives = 331/763 (43%), Gaps = 119/763 (15%)

Query: 5   LNEVLTILDTVTPIEPAL-----EPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           +N+ + IL +    E +L     E  +P +  T    V+ +  + ++G +FF WA+K   
Sbjct: 35  VNDTIQILKSHEKWEQSLQTHFTESDIPIIDVTHF--VLDRINDVELGLKFFDWASKNS- 91

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQ---TLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           L    + ++  S+L   + F ++ +   TL+E+++       +    ++  Y  VG  +K
Sbjct: 92  LSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDK 151

Query: 117 ALESF-GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN------------ 163
           ALE + G +K  +  P  Y  N++LN+  + +    A  +Y EM+  +            
Sbjct: 152 ALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTT 211

Query: 164 ---------------------------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
                                      C+PNIV ++ LI+G  K G+ E A K+  ++  
Sbjct: 212 SIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKM 271

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG----------------------- 233
           +G +P   T+  +++G C++   +    L L+MKD G                       
Sbjct: 272 KGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIK 331

Query: 234 ------------CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
                       C PD V YN L+N FC    V+EA  LL    + G  P   +Y+ L+ 
Sbjct: 332 AKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVH 391

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  +   Y +A  +  +M    +E D++ YG +I GL  AG+V  A+ +   M  RGI+P
Sbjct: 392 GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILP 451

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   YN L+ G    G L  A+ +  E+  ++  P+   +  L+ G  R+G +D+A+KLF
Sbjct: 452 DANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLF 511

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
             + + G  P V  +N +I G  K+G ++ A L   KM             +  + V D 
Sbjct: 512 QLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKM-------------RRAHHVPDI 558

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++ Y     ++   KI   + +    P+++TY SLING+C+ G    A KLF  
Sbjct: 559 FTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSM 618

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++  GL+P  VTY  LI    +  +   A   F  M  N CTP+ A +  L+      + 
Sbjct: 619 MRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKA 678

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
            +++        R+ +   + S    E+F  +   +   Q            + A Y   
Sbjct: 679 TAVS--------REPNNLHENSRSMFEDFFSRMIGDGWTQ------------KAAAYNCI 718

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           LI LCQ   VK AL + + ++         S V LIHG+C  G
Sbjct: 719 LICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEG 761



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 133/539 (24%), Positives = 237/539 (43%), Gaps = 62/539 (11%)

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-DGFVPRLGSYSCLIDGLFRA 286
           +MK     P   A + +L  +  +  VD+AL +     K    +P   + + L++ L + 
Sbjct: 123 EMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKH 182

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVL----YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           +R + A+  Y +M +     D+ +      +M++GL   G+++D +KL+     +G VP+
Sbjct: 183 RRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPN 242

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G+C  G ++ A  L  ++  +  +P   TF  L+ G C+ GM +    L  
Sbjct: 243 IVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLL 302

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           +M+  G   +V M+N +ID   K G +++  + L    E    P              D 
Sbjct: 303 EMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEP--------------DL 348

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  +C+ G + +A K+L Q    G  P+ +TY  L++G+CK G    A     E
Sbjct: 349 VTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIE 408

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   GL  D ++YG LI+GL      + A  I  +M   G  P   +Y  LM    ++ K
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468

Query: 582 FSLAFSLWLQYL-RDIS----------------GRDDESMK------------------- 605
            S+A  +  + L ++I+                G  DE+ K                   
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE-- 663
            I+ F + G ++NAI  + +M    +   +  ++  + G  +   +   L IF ++V+  
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           CK  V   +   LI+G C++G   +A  +F     +G  L+P V  Y +    F K+ K
Sbjct: 589 CKPNVV--TYTSLINGYCRKGETKMAEKLFSMMRSHG--LKPSVVTYSILIGSFCKEAK 643



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 135/291 (46%), Gaps = 14/291 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + V+I G+ K G  + A+    KM+     PD++ ++ +++   ++      L ++  MV
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMV 585

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K NC PN+VT++ LING  + G+T++A K+   M   G+ P+  TY+I+I   C+  +  
Sbjct: 586 KQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLG 645

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV----------DEALALLRSFEK---- 266
           +A   F  M  + C+P+  A++ L+NGF   +            + + ++   F      
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIG 705

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           DG+  +  +Y+C++  L + +    A     KM    +  D V +  +I G+   G  K+
Sbjct: 706 DGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE 765

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
              ++S     G +     Y+  +  F   G + +A  +   + K    PN
Sbjct: 766 WRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/507 (31%), Positives = 258/507 (50%), Gaps = 33/507 (6%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +VF VLI  + ++G  E+AL  + KM   D  P +   N VL+   +K  F     VY +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGD 183

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV     PN+VT+  LI+G  + G    A ++ DEM ++ I P    YTI+I GLC  +R
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +F  M++SG  P+   YN +++G+CK+  V +AL L +    DG +P + ++  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDGL +      A  +   M    + P++ +Y  +I G  +AG + +A+ L S++ +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I+PD + Y+ LIKG C +  +++A  L  E+ K+  LPN  T+  LI G C+ G ++ A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           ++ ++M + G  P++  F+ LIDG CKAG++E A  L+ +M I G  P            
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP------------ 471

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   +++ +   G   +A+++  ++ E+G  P++ T + LI+G CK G I+ A+K
Sbjct: 472 --DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 518 LF-------------KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           LF              EL      P+ V Y  LI GL    R   A + F  M  +G  P
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
              V+  ++      R   L   + LQ
Sbjct: 590 D--VFTCIVIIQGHFRAMHLRDVMMLQ 614



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 169/614 (27%), Positives = 288/614 (46%), Gaps = 69/614 (11%)

Query: 116 KALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +ALE F  + +  D   +  +Y+A++++    +L+  A  +  ++++  CL N       
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQ--CLQN------- 102

Query: 175 INGLSKSGKTEVAI-KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
               S+  +   ++  +L  +      PN F   ++I    ++   +EA  ++ KM    
Sbjct: 103 ----SRRSRICCSVFNVLSRLESSKFTPNVFG--VLIIAFSEMGLVEEALWVYYKMD--- 153

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P   A N +L+G  K  R D    +       G  P + +Y  LIDG  R   + +A+
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M E+KI P VV+Y ++IRGL    ++ +A  +   MR  G++P+ Y YN ++ G+
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +  + +A  L  E+     LPN  TF ILI G+C+   +  A+K    M   G  P++
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKN---PTLF-----LRLSQGGNRVHDKASL- 464
            ++N LIDG CKAG L +A  L    EI K+   P +F     ++   G +R+ +   L 
Sbjct: 334 FVYNCLIDGYCKAGNLSEA--LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 465 ---------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                           T+++ YC  G + KA ++  Q+ E G  P+IIT+++LI+G+CK 
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A+ L+ E+ +KGL PD V Y  LI+G  +    ++AFR+  +M + G  P+    
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+   C+  + S A  L+L      +G D    K+                  E+D  
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAK----TGTDTTGSKTN-----------------ELDRS 550

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP-SCVKLIHGLCKRGYLDL 688
           L       YT  + GLC DG++ +A   FS +  C  +     +C+ +I G  +  +L  
Sbjct: 551 LCSPNHVMYTALIQGLCTDGRIFKASKFFSDM-RCSGLRPDVFTCIVIIQGHFRAMHLRD 609

Query: 689 AMDVFLYTLKNGFI 702
            M +    LK G I
Sbjct: 610 VMMLQADILKMGII 623



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 239/501 (47%), Gaps = 8/501 (1%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K   L +  + + V+  L+K   FD  W+   ++ +   S     +  LI G  + GD  
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA   F +M E    P V IY  ++     +     A +++  M     LPN+ T++ ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +G  K    + A+++  EM   G+LPN  T+ I+I GLC+ +    A +  + M   G  
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+   YN L++G+CK   + EAL+L    EK   +P + +YS LI GL    R +EA   
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            ++M ++   P+ V Y  +I G  + G ++ A+++ S M E+GI P+   ++ LI G+C 
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G ++ A  L  E+  +  LP+   +T LI G  ++G   +A +L  +M++AG  P+V  
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFT 510

Query: 416 FNALIDGLCKAGELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            + LIDGLCK G +  A  LF         G       R     N V   A +Q +    
Sbjct: 511 LSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL---- 566

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           CT G I KA K    +  SG  PD+ T   +I G  +  ++   + L  ++   G+ P+S
Sbjct: 567 CTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNS 626

Query: 532 VTYGTLINGLQRVDREEDAFR 552
             Y  L  G +     + A R
Sbjct: 627 SVYRVLAKGYEESGYLKSALR 647



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 160/328 (48%), Gaps = 15/328 (4%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VV ++F    LI GY K G+  +AL    ++++ +  PDV+ Y+ ++           A 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  EM K   LPN VT++ LI+G  K G  E AI++  +MT++GI PN  T++ +I G 
Sbjct: 389 GLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGY 448

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  + + A  L+ +M   G  PD VAY AL++G  K     EA  L +  ++ G  P +
Sbjct: 449 CKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNV 508

Query: 274 GSYSCLIDGLFRAKRYDEAYAWY-------------RKMFEEKIEPDVVLYGVMIRGLSE 320
            + SCLIDGL +  R  +A   +              ++      P+ V+Y  +I+GL  
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCT 568

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G++  A K  SDMR  G+ PD +    +I+G      L     LQ +I K   +PN+  
Sbjct: 569 DGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSV 628

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAG 408
           + +L  G   +G +  A +    +   G
Sbjct: 629 YRVLAKGYEESGYLKSALRCSEDLSGIG 656



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 13/253 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY K G+ EKA+E   +M E   +P++  ++ +++   +      A+ +Y EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V    LP++V ++ LI+G  K G T+ A ++  EM + G+ PN FT + +I GLC+  R 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 220 DEAYRLFL-------------KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            +A +LFL             ++  S CSP+ V Y AL+ G C   R+ +A         
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +   +I G FRA    +       + +  I P+  +Y V+ +G  E+G +K 
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKS 644

Query: 327 AMKLLSDMRERGI 339
           A++   D+   GI
Sbjct: 645 ALRCSEDLSGIGI 657



 Score = 42.4 bits (98), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 58/133 (43%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I + L   G D      +EL     S    ++  LI G    G   KA + F  M+ 
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV+    ++   FR       + +  +++K+  +PN   + +L  G  +SG  + 
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKS 644

Query: 187 AIKMLDEMTQRGI 199
           A++  ++++  GI
Sbjct: 645 ALRCSEDLSGIGI 657


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 255/518 (49%), Gaps = 24/518 (4%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    L++GY + G  + A      M      PD Y Y  ++     +     AL++ 
Sbjct: 104 DVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M++  C P++VT+++L+  + KS     A+K+LDEM  +G  PN  TY ++I+G+C+ 
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           +R D+A ++  ++   G  PD V+Y  +L G C  +R ++   L     ++  VP   ++
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             L+    R    + A     +M E     +  L  ++I  + + G+V DA + L++M  
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PDT  Y  ++KG C  G  + A+ L  E+ +++  PN  TF   IC +C+ G++D 
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-- 454
           A  L  +M + GC   +  +NAL++G C  G ++ A  LF  +    N   +  L  G  
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLC 460

Query: 455 -GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              R+   A L                  +V  +C  G + +A +++ Q+ E G  P++I
Sbjct: 461 HAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLI 520

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           T+N+L++G  +  N   AL+L   L  KG+  D++TY ++++ L R DR E+A ++F  +
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAV 580

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
              G  P   +Y  +++  C+R +   A   +   + +
Sbjct: 581 QDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSN 618



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 263/564 (46%), Gaps = 41/564 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L      G   + F Y  +++G C+  R D A RL
Sbjct: 68  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M      PD   Y  L+ G C   RV +AL+LL    +    P + +Y+ L++ + +
Sbjct: 128 IASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           +  + +A     +M  +   P++V Y V+I G+    +V DA ++L+ +   G  PDT  
Sbjct: 185 SSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVS 244

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  ++KG C     +    L  E+ + + +PN  TF +L+   CR GMV+ A ++ ++M 
Sbjct: 245 YTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS 304

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRV 458
           + GC  +  + N +I+ +CK G ++ A      M   G +P      T+   L + G   
Sbjct: 305 EHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWE 364

Query: 459 HDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             K  L  MV +                C  GLI +A  ++ Q+ E G    I+TYN+L+
Sbjct: 365 DAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC  G ++ AL+LF  L  +   P+++TY TL+ GL   +R + A  +  +M QN C 
Sbjct: 425 NGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCP 481

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD----DESMKSIEEFLQKGEVENA 619
            +   +  L+++ C++     A  L  Q +      +    +  +  I E     E    
Sbjct: 482 LNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALEL 541

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KL 676
           + GL+     L+      Y+  +  L ++ +++EA+ +F  +   + +   P  V   K+
Sbjct: 542 LHGLVSKGISLDTIT---YSSIVDVLSREDRIEEAVQMFHAV---QDMGMRPKAVMYNKI 595

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNG 700
           +  LCKR   D A+D F + + N 
Sbjct: 596 LSALCKRCETDRAIDFFAHMVSNS 619



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 235/506 (46%), Gaps = 16/506 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R+   S  + + ++  + K +GF    + LDE+R+   +     + V+I+G  +    +
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A +   ++  +  QPD   Y  VL      + +     ++ EMV+ NC+PN VTF +L+
Sbjct: 225 DARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
               + G  E AI++LD M++ G   N     IVI+ +C+  R D+A+     M   GCS
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCS 344

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD ++Y  +L G C+  R ++A  LL    +    P   +++  I  L +    D+A   
Sbjct: 345 PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M E      +V Y  ++ G    G+V  A++L + +      P+T  Y  L+ G C 
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCH 461

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              LD A  L  E+ + D   N  TF +L+   C+ G V++A +L  +M + GC P++  
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           FN L+DG+ +    E+A  L + + + K  +L            D  +  ++V+      
Sbjct: 522 FNTLLDGITEDCNSEEALELLHGL-VSKGISL------------DTITYSSIVDVLSRED 568

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I +A ++   + + G  P  + YN +++  CK    + A+  F  +      P+  TY 
Sbjct: 569 RIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYV 628

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG 561
            LI GL R    ++A  +  ++   G
Sbjct: 629 ILIEGLAREGLLKEARYVLSELCSRG 654



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/529 (20%), Positives = 211/529 (39%), Gaps = 97/529 (18%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTY------------------------------ 344
           +R L     + +A +L+     RG  PD Y                              
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 345 -----CYNALIKGFCDLGLLDQAR--------------------------------SLQV 367
                 YN L+ G+C  G LD AR                                SL  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLD 161

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ +R+  P+  T+T+L+  +C++     A K+ ++M   GC P++  +N +I+G+C+  
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221

Query: 428 ELEKANLLFYKM-EIGKNP----------------------TLFLRLSQGGNRVHDKASL 464
            ++ A  +  ++   G  P                       LF  + +  N V ++ + 
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE-NNCVPNEVTF 280

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +V  +C  G++ +A ++L +++E G   +    N +IN  CK G ++ A +    +  
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  PD+++Y T++ GL R  R EDA  +  +M +  C P+   + + +   C++     
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           A  L  Q           +  + +  F  +G V++A++    +  + N      YT  L 
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTIT---YTTLLT 457

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GLC   ++  A  + + +++    +   +   L+   C++G+++ A+++    +++G   
Sbjct: 458 GLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTP 517

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
                N LL  +  ++D     A  LL  + S G  LD   Y     +L
Sbjct: 518 NLITFNTLLDGI--TEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL 564



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 3/314 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L+E+   N       F   I    + G  ++A+    +M
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E+ C   +  YNA++N    +     AL ++     L C PN +T++ L+ GL  + + 
Sbjct: 409 PEYGCSVGIVTYNALVNGFCVQGRVDSALELFN---SLPCEPNTITYTTLLTGLCHAERL 465

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L EM Q     N  T+ +++S  CQ    +EA  L  +M + GC+P+ + +N L
Sbjct: 466 DAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTL 525

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G  +    +EAL LL      G      +YS ++D L R  R +EA   +  + +  +
Sbjct: 526 LDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGM 585

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P  V+Y  ++  L +  +   A+   + M     +P+   Y  LI+G    GLL +AR 
Sbjct: 586 RPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARY 645

Query: 365 LQVEIWKRDSLPNT 378
           +  E+  R  L  +
Sbjct: 646 VLSELCSRGVLSKS 659


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 250/491 (50%), Gaps = 18/491 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYN 137
           F   +Q  D ++      +   F ++   Y K    EKA+E FG+M  EF C+  V  +N
Sbjct: 96  FGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFN 155

Query: 138 AVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           +VLN+  ++ LF  AL  Y   V  K N  PN+++F+L+I  + K G  + AI++  EM 
Sbjct: 156 SVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMA 215

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            +   P+ FTY  ++ GLC+ +R DEA  L  +M+  GC P  V +N L+NG CK   + 
Sbjct: 216 IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMV 275

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
               L+ +    G VP   +Y+ +I+GL    + D+A +   +M   K  P+ V YG +I
Sbjct: 276 RVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLI 335

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL + G+  D + LLS + ERG   + Y Y+ LI G       ++A  L  ++ ++   
Sbjct: 336 NGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQ 395

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN   ++ LI G+CR G +D+A+++  +M   GC P+   +++LI G  K G  +KA + 
Sbjct: 396 PNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA-IR 454

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +K E+ KN           N V ++     ++   C  G + +A  +   +   G  PD
Sbjct: 455 VWK-EMAKN-----------NCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPD 502

Query: 496 IITYNSLINGFCKVGNINGALKLFKEL--QLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           ++ Y+S+I+G C  G++   LKLF E+  Q    +PD VTY  L+  L + +    A  +
Sbjct: 503 VVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 562

Query: 554 FGQMPQNGCTP 564
              M   GC P
Sbjct: 563 LNSMLDRGCNP 573



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 248/488 (50%), Gaps = 51/488 (10%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDC 114
           R+ +RSF S   V++++++   F    +  +    G  ++  +V  F ++I    K+G  
Sbjct: 148 RRTVRSFNS---VLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 204

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++A+E F +M    C+PDV+ Y  +++   ++     A+ +  EM    C P+ VTF++L
Sbjct: 205 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 264

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           INGL K G      K++D M  +G +PN+ TY  +I+GLC   + D+A  L  +M  S C
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 324

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG  K  R  + + LL S E+ G      +YS LI GLF+ ++ +EA  
Sbjct: 325 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 384

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            ++KM E+  +P++V+Y  +I GL   GK+ +A ++L +M  +G  P+ + Y++LIKGF 
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 444

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G   +A  +  E+ K + +PN   +++LI G+C +G + +A  ++  M   G  P V 
Sbjct: 445 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 504

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++++I GLC AG +E    LF +M           L Q                     
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEM-----------LCQ--------------------- 532

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                         ES + PD++TYN L+   CK  +I+ A+ L   +  +G  PD +T 
Sbjct: 533 --------------ESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITC 578

Query: 535 GTLINGLQ 542
              +N L+
Sbjct: 579 NIFLNALR 586



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 202/406 (49%), Gaps = 18/406 (4%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C LGL+D+A  +  E+  +   P+  T+  L+ G+C+   +D+A 
Sbjct: 184 ISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  GCFPS   FN LI+GLCK G++ +   L   M        FL+       V
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM--------FLK-----GCV 290

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +  T++   C  G + KA  +L ++  S  +P+ +TY +LING  K G     + L
Sbjct: 291 PNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHL 350

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              L+ +G   +   Y TLI+GL + ++ E+A  ++ +M + GC P+  VY +L+   CR
Sbjct: 351 LSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCR 410

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K   A  +  + +      +  +  S I+ F + G  + AI+   EM           
Sbjct: 411 EGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEIC 470

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y++ + GLC+DG+++EA+ +++ ++         +   +IHGLC  G +++ + +F   L
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530

Query: 698 KNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
                 +P V  Y  LLR+L   K N   HA  LL  M   G + D
Sbjct: 531 CQESDSQPDVVTYNILLRAL--CKQNSISHAIDLLNSMLDRGCNPD 574



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 226/500 (45%), Gaps = 19/500 (3%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF  LI   + SG      ++ D M +   +  +  + +V     + +  ++A  LF +M
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 230 KDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKDGFVPRLGSYSCLIDGLFRA 286
            D   C     ++N++LN   +      AL         K    P + S++ +I  + + 
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              D A   +R+M  +K EPDV  Y  ++ GL +  ++ +A+ LL +M+  G  P +  +
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N LI G C  G + +   L   ++ +  +PN  T+  +I G+C  G +D A  L ++M  
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
           + C P+   +  LI+GL K G       L   +E            + G+  ++ A   T
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE------------ERGHHANEYA-YST 368

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++          +A  +  ++ E G  P+I+ Y++LI+G C+ G ++ A ++  E+  KG
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             P++ TY +LI G  +    + A R++ +M +N C P+   Y  L+   C   K   A 
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 488

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLI 643
            +W   L      D  +  S I      G VE  ++   EM  + +D Q  +  Y I L 
Sbjct: 489 MMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLR 548

Query: 644 GLCQDGQVKEALNIFSVLVE 663
            LC+   +  A+++ + +++
Sbjct: 549 ALCKQNSISHAIDLLNSMLD 568



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 17/310 (5%)

Query: 395 DDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           + A +LF +M ++  C  +V  FN++++ + + G   +A L FY+  +G           
Sbjct: 132 EKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA-LEFYECGVGGKT-------- 182

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   +  S   +++  C  GL+ +A ++  ++A     PD+ TY +L++G CK   I+
Sbjct: 183 --NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+ L  E+Q++G  P SVT+  LINGL +        ++   M   GC P+   Y +++
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLND 632
              C + K   A SL  + +      +D +  + I   +++G   + +  L  ++ + + 
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                Y+  + GL ++ + +EA+ ++  +VE  C+  +   S   LI GLC+ G LD A 
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYS--ALIDGLCREGKLDEAK 418

Query: 691 DVFLYTLKNG 700
           ++    +  G
Sbjct: 419 EILCEMVNKG 428



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 23/135 (17%)

Query: 104 LISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           +I G    G  E  L+ F +M  +E D QPDV  YN +L    ++     A+ +   M+ 
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568

Query: 162 LNCLPNIVTFSLLINGL---------------------SKSGKTEVAIKMLDEMTQRGIL 200
             C P+++T ++ +N L                      K  +   A K+++ M Q+ + 
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLP 628

Query: 201 PNKFTYTIVISGLCQ 215
           PN  T+  +I  LC+
Sbjct: 629 PNASTWERIIPELCK 643


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 248/480 (51%), Gaps = 31/480 (6%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +VF VLI  + ++G  E+AL  + KM   D  P +   N VL+   +K  F     VY +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGD 183

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV     PN+VT+  LI+G  + G    A ++ DEM ++ I P    YTI+I GLC  +R
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +F  M++SG  P+   YN +++G+CK+  V +AL L      DG +P + ++  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDGL +      A  +   M    + P++ +Y  +I G  +AG + +A+ L S++ +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I+PD + Y+ LIKG C +  +++A  L  E+ K+  LPN  T+  LI G C+ G ++ A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           ++ ++M + G  P++  F+ LIDG CKAG++E A  L+ +M I G  P            
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP------------ 471

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   +++ +   G   +A+++  ++ E+G  P++ T + LI+G CK G I+ A+K
Sbjct: 472 --DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 518 LF-------------KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           LF              EL      P+ V Y  LI GL    R   A + F  M  +G  P
Sbjct: 530 LFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 171/616 (27%), Positives = 290/616 (47%), Gaps = 73/616 (11%)

Query: 116 KALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +ALE F  + +  D   +  +Y+A++++    +L+           K  CL        L
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLY----------AKARCL-----MRDL 96

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFT---YTIVISGLCQINRADEAYRLFLKMKD 231
           I  L KS ++ +   + + +++  +  +KFT   + ++I    ++   +EA  ++ KM  
Sbjct: 97  IQCLQKSRRSRICCSVFNVLSR--LESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD- 153

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               P   A N +L+G  K  R D    +       G  P + +Y  LIDG  R   + +
Sbjct: 154 --VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLK 211

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+  + +M E+KI P VV+Y ++IRGL    ++ +A  +   MR  G++P+ Y YN ++ 
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMD 271

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C +  + +A  L  E+     LPN  TF ILI G+C+   +  A+K    M   G  P
Sbjct: 272 GYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVP 331

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKN---PTLF-----LRLSQGGNRVHDKAS 463
           ++ ++N LIDG CKAG L +A  L    EI K+   P +F     ++   G +R+ +   
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEA--LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADG 389

Query: 464 L----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           L                 T+++ YC  G + KA ++  Q+ E G  P+IIT+++LI+G+C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G +  A+ L+ E+ +KGL PD V Y  LI+G  +    ++AFR+  +M + G  P+  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
               L+   C+  + S A  L+L      +G D    K+                  E+D
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLFLAK----TGTDTTGSKTN-----------------ELD 548

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP-SCVKLIHGLCKRGYL 686
             L       YT  + GLC DG++ +A   FS +  C  +     +C+ +I G  +  +L
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM-RCSGLRPDVFTCIVIIQGHFRAMHL 607

Query: 687 DLAMDVFLYTLKNGFI 702
              M +    LK G I
Sbjct: 608 RDVMMLQADILKMGII 623



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 240/504 (47%), Gaps = 8/504 (1%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L +  + + V+  L+K   FD  W+   ++ +   S     +  LI G  + GD  KA  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F +M E    P V IY  ++     +     A +++  M     LPN+ T++ +++G  
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K    + A+++  EM   G+LPN  T+ I+I GLC+ +    A +  + M   G  P+  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+CK   + EAL+L    EK   +P + +YS LI GL    R +EA    ++M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            ++   P+ V Y  +I G  + G ++ A+++ S M E+GI P+   ++ LI G+C  G +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           + A  L  E+  +  LP+   +T LI G  ++G   +A +L  +M++AG  P+V   + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 420 IDGLCKAGELEKANLLFYKME----IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           IDGLCK G +  A  LF         G       R     N V   A +Q +    CT G
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGL----CTDG 570

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I KA K    +  SG  PD+ T   +I G  +  ++   + L  ++   G+ P+S  Y 
Sbjct: 571 RIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYR 630

Query: 536 TLINGLQRVDREEDAFRIFGQMPQ 559
            L  G +     + A    G+  Q
Sbjct: 631 VLAKGYEESGYLKSALSFCGEGVQ 654



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 124/565 (21%), Positives = 209/565 (36%), Gaps = 142/565 (25%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY K G  E A+  + +M      PDV  Y A+++  F+      A  ++ EM
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML-------------DEMTQRGILPNKFTY 206
            +    PN+ T S LI+GL K G+   AIK+              +E+ +    PN   Y
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMY 559

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-------- 258
           T +I GLC   R  +A + F  M+ SG  PD      ++ G  +   + + +        
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILK 619

Query: 259 -----------ALLRSFEKDGFVPRL-------------------GSYS-------CLID 281
                       L + +E+ G++                      GSY+       C++ 
Sbjct: 620 MGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVT 679

Query: 282 GLFRAKRYDEAYA-----------WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
                K    +Y            WY     +   P  +L  V   G     +   A++L
Sbjct: 680 ---EKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQL 736

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLD---------QARSLQVEIWKRDSLPNTH-- 379
              M+     PD       +    DLG LD         + R L  ++   +SL N +  
Sbjct: 737 FRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSK 796

Query: 380 --------------------TFTILICGMCRNGMVDDAQKLFNKM--------------- 404
                               T+T +I G   +G  ++A +LF +M               
Sbjct: 797 CGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGE 856

Query: 405 -EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
            E +   P+   F  ++     AG +E+    F  M+  ++ +L  R+S  G        
Sbjct: 857 XESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMK--EDYSLRPRISHFG-------- 906

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV-----GNINGALKL 518
              MV+  C AGL+ +AY+ ++++      P+ + + +L+ G C +     GN N  +K+
Sbjct: 907 --CMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLL-GACSLQGDSNGNGNSNIKI 960

Query: 519 FKEL--QLKGLRPDSVTYGTLINGL 541
             E   QL  L P  V    +++ L
Sbjct: 961 XSEARRQLLELEPSHVGDNVIMSNL 985


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 272/541 (50%), Gaps = 38/541 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+++ ++ ++  LS +     A +  D M   G+ PN +TY I++  LC      EA  +
Sbjct: 121 PSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M+ +GC P+ V YN L+  FC+   VD A  L+    + G  P L +++ +++G+ +
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A R ++A   + +M +E + PD V Y  ++ G  + G   +A+ + ++M  +GI+PD   
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           + +LI   C  G L++A  L  E+ +R    N  TFT LI G C+ G +DDA     +M 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
           +    PSV  +NALI+G C  G +++A  L  +ME  G  P              D  + 
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKP--------------DVVTY 405

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++  YC  G  H A+++  Q+ E+G LPD ITY+SLI   C+   +  A  LFK +  
Sbjct: 406 STILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMIS 465

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL---MTWSCRRRK 581
            GL+PD VTY +LI+G  +    E A  +  +M + G  P    Y  L   ++ S R ++
Sbjct: 466 LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKE 525

Query: 582 FS-LAFSLW--------LQYLRDISGRDDESMKSI----EEFLQKG---EVENAIQGLLE 625
              L F L+        ++Y   +    +  +KS+    + F  KG   E +   Q +L+
Sbjct: 526 AQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD 585

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
            ++ L+    + Y++ + G C++G V +AL+    +++C       S + LI GL ++G 
Sbjct: 586 RNWNLDG---SVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642

Query: 686 L 686
           +
Sbjct: 643 V 643



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 290/592 (48%), Gaps = 44/592 (7%)

Query: 121 FGKMKEFDCQPDVYIYN----AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           F  M      P+VY YN    A+     RK+    AL+V  +M    C PN VT++ L+ 
Sbjct: 145 FDSMLSDGVAPNVYTYNILVRALCGRGHRKE----ALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              ++G+ + A +++D M + G+ PN  T+  V++G+C+  R ++A ++F +M   G +P
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V+YN L+ G+CK+    EAL++     + G +P + +++ LI  + +A   + A    
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R+M E  ++ + + +  +I G  + G + DA+  + +MR+  I P   CYNALI G+C +
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +D+AR L  E+  +   P+  T++ ++   C+NG    A +L  +M + G  P    +
Sbjct: 381 GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           ++LI  LC+   L  A++LF  M  +G  P              D+ +  ++++ +C  G
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQP--------------DEVTYTSLIDGHCKEG 486

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +  ++ ++G LPD++TY+ LING  K      A +L  +L  +   P ++ Y 
Sbjct: 487 NVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYD 546

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            L+   +  + +     + G   +     +  VY+S++      R ++L  S++   L  
Sbjct: 547 ALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD-----RNWNLDGSVY-SVLIH 600

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI-GLCQDGQVKEA 654
              R+   MK++    Q          +L+  F  N    +  TI LI GL + G V EA
Sbjct: 601 GHCREGNVMKALSFHKQ----------MLQCGFAPN----STSTISLIRGLFEKGMVVEA 646

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
             +   L+ C ++    +   LI    K G +D  +DV     ++G +  PR
Sbjct: 647 DQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSPR 698



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 234/461 (50%), Gaps = 4/461 (0%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
             L ++R       +  +  L++ + + G+ ++A      M+E   +P++  +N+V+N  
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      A  V+ EMVK    P+ V+++ L+ G  K G +  A+ +  EMT++GI+P+ 
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+T +I  +C+    + A  L  +M++ G   + + + AL++GFCK   +D+AL  +R 
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +    P +  Y+ LI+G     R DEA    R+M  + ++PDVV Y  ++    + G 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
              A +L   M E G++PD   Y++LI+  C+   L  A  L   +      P+  T+T 
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G C+ G V+ A  L ++M KAG  P V  ++ LI+GL K+   ++A  L +K+   +
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL-YHE 536

Query: 444 NPTLFLRLSQGGNRVHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            P           R    A L++   +++ +C  GL+++A K+   + +     D   Y+
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYS 596

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            LI+G C+ GN+  AL   K++   G  P+S +  +LI GL
Sbjct: 597 VLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGL 637



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 252/557 (45%), Gaps = 31/557 (5%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D + S  V+     + +L+      G  ++AL     M+   C P+   YN ++    R 
Sbjct: 146 DSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRA 205

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +   M +    PN+VTF+ ++NG+ K+G+ E A K+ DEM + G+ P+  +Y
Sbjct: 206 GEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSY 265

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ G C++  + EA  +F +M   G  PD V + +L++  CK   ++ A+ L+R   +
Sbjct: 266 NTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE 325

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G      +++ LIDG  +    D+A    R+M + +I+P VV Y  +I G    G++ +
Sbjct: 326 RGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDE 385

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +L+ +M  +G+ PD   Y+ ++  +C  G    A  L  ++ +   LP+  T++ LI 
Sbjct: 386 ARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIR 445

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
            +C    + DA  LF  M   G  P    + +LIDG CK G +E+A  L  +M + G  P
Sbjct: 446 VLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN----- 500
                         D  +   ++     +    +A ++L +L     +P  I Y+     
Sbjct: 506 --------------DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC 551

Query: 501 ----------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
                     +L+ GFC  G +N A K+++ +  +    D   Y  LI+G  R      A
Sbjct: 552 CRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKA 611

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
                QM Q G  P+     SL+     +     A  +  Q L   S  D E+ K++ + 
Sbjct: 612 LSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDL 671

Query: 611 -LQKGEVENAIQGLLEM 626
            L++G V+  +  L  M
Sbjct: 672 NLKEGNVDAVLDVLHGM 688



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 222/480 (46%), Gaps = 32/480 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V++ + K    +   +  DE+    ++     +  L+ GY KVG   +AL  F +M  
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  + +++++  +      A+ +  EM +     N +TF+ LI+G  K G  + 
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+  + EM Q  I P+   Y  +I+G C + R DEA  L  +M+  G  PD V Y+ +L+
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK      A  L +   ++G +P   +YS LI  L   KR  +A+  ++ M    ++P
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP 470

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V Y  +I G  + G V+ A+ L  +M + G++PD   Y+ LI G        +A+ L 
Sbjct: 471 DEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530

Query: 367 VEIWKRDSLPNTHTFTILI-C--------------GMCRNGMVDDAQKLFNKMEKAGCFP 411
            +++  + +P    +  L+ C              G C  G++++A K++  +       
Sbjct: 531 FKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNL 590

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
              +++ LI G C+ G + KA L F+K  ++ G  P              +  S  +++ 
Sbjct: 591 DGSVYSVLIHGHCREGNVMKA-LSFHKQMLQCGFAP--------------NSTSTISLIR 635

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G++ +A +++ QL    +L D     +LI+   K GN++  L +   +   GL P
Sbjct: 636 GLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 181/434 (41%), Gaps = 50/434 (11%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  T+     K          F    ++  +    + +++I ++ K    +     + E
Sbjct: 263 VSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVRE 322

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +R   + +    F  LI G+ K G  + AL +  +M++   QP V  YNA++N       
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGR 382

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +  EM      P++VT+S +++   K+G T  A ++  +M + G+LP+  TY+ 
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I  LC+  R  +A+ LF  M   G  PD V Y +L++G CK   V+ AL+L     K G
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP---------------------- 306
            +P + +YS LI+GL ++ R  EA     K++ E+  P                      
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLA 562

Query: 307 ----------------------------DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
                                       D  +Y V+I G    G V  A+     M + G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P++    +LI+G  + G++ +A  +  ++    SL +      LI    + G VD   
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 399 KLFNKMEKAGCFPS 412
            + + M + G  PS
Sbjct: 683 DVLHGMARDGLLPS 696


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 262/555 (47%), Gaps = 41/555 (7%)

Query: 45  QVGFR--FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           Q G R   F ++A    L      +AV+         D Y + L E    N+ + + V  
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVM---------DRYHRMLSEGVQPNLLIYNAV-- 221

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
             I+   K G+   A     K+ E +  PD + Y +++    RK     AL V+ +M K 
Sbjct: 222 --INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN VT+S LINGL  SG+   A  ++ EM   GILP   T T  I  LC +   ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +RLF+ MK+ GC P+   Y AL++G C    +  A+ L     +DG  P   +Y+ LI+ 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L   +R   A+     M      P++V Y  MI+G    G  K AM ++++M +RG   +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKL 400
              YN +IKG+CD G  +   +L++    RD    P+  ++T LICG C+   ++ A  L
Sbjct: 460 LVTYNTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQ 453
           FN+M   G  P+   + ALIDG CK  +L+ A  L   M+  G  P       L   L++
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 454 GGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIIT 498
             N    +   + M+E+                C  G    A ++  ++ E G LP+++T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+SLI    + G +  A  LF EL+  GL PD +TY  +I       + E AF   G+M 
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 559 QNGCTPSPAVYKSLM 573
           + GC P+   Y  L+
Sbjct: 698 KAGCQPTLWTYGVLI 712



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 269/555 (48%), Gaps = 24/555 (4%)

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  LD ++Q G+    F Y+ ++  L ++         + +M   G  P+ + YNA++N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK   V +A  +++   +    P   +Y+ +I G  R    D A   + +M +E  EP+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  +I GL ++G+V +A  L+ +M   GI+P  +     I   CD+G  + A  L V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++  +   PN +T+T LI G+C +G++  A  LF++M + G FP+   +NALI+ L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            ++ A ++   M   G +P +               +   M++ YC  G   KA  ++  
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNI--------------VTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G+  +++TYN++I G+C  GN   AL++   ++  G +PD  +Y  LI G  ++ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E AF +F +M  +G  P+   Y +L+   C+  K   A SL L++++    R +  +++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL-LEHMKRSGCRPN--VQT 567

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
               +     +N   G  E+   + +  + P    YT  + GLC++G    AL +F+ ++
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           E   +    +   LI  L + G ++ A ++F    ++G I  P    Y+     +    K
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI--PDEITYVKMIEAYIMSGK 685

Query: 723 KVHAYHLLCRMKSVG 737
             HA++ L RM   G
Sbjct: 686 VEHAFNFLGRMIKAG 700



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 247/531 (46%), Gaps = 51/531 (9%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           ++ Y+A+L    R  +    +  Y+ M+     PN++ ++ +IN L K G    A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           ++ +  + P+ FTYT +I G C+ +  D A ++F +M   GC P+ V Y+ L+NG C   
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           RV+EA  L+R     G +P   + +  I  L     Y++A+  +  M  +  EP+V  Y 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL----------------------- 349
            +I GL  +G +K A+ L   M   G+ P+T  YNAL                       
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 350 ------------IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                       IKG+C LG   +A  +   + +R    N  T+  +I G C +G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
            ++ + M   GC P    +  LI G CK  ++E A  LF +M + G  P           
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----------- 528

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              ++ +   +++ YC    +  A  +L  +  SG  P++ TYN LI+G  K  N +GA 
Sbjct: 529 ---NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +L K +  +G+ P+ VTY  +I+GL +      A  +F +M + GC P+   Y SL+   
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQGLLEM 626
            +  K   A +L+ +  R     D+ + +K IE ++  G+VE+A   L  M
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 233/526 (44%), Gaps = 51/526 (9%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVY-----------------------------------I 135
           +G  E A   F  MK   C+P+VY                                    
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YNA++NI    +    A  V   M +  C PNIVT++ +I G    G  + A+ +++ M 
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           QRG   N  TY  +I G C       A R+   M+D GC PD  +Y  L+ GFCK+ +++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A  L      DG  P   +Y+ LIDG  + ++ D A +    M      P+V  Y V+I
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL++      A +L   M E GI P+   Y A+I G C  G    A  +  ++ ++  L
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NL 434
           PN  T++ LI  + + G V++A+ LF ++E+ G  P    +  +I+    +G++E A N 
Sbjct: 633 PNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNF 692

Query: 435 LFYKMEIGKNPTLF-----LRLSQGGNRVHDK--ASLQTMVEQYCTAGLI---HKAYKIL 484
           L   ++ G  PTL+     ++  +    + D+  A+L  +V   C+ G       A  ++
Sbjct: 693 LGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN-CSFGYQTTDQDAVSVM 751

Query: 485 -MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             +LAE      +   N+L++     G    A +L   +  +GL PD   Y +L+  L R
Sbjct: 752 SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC---RRRKFSLAF 586
           V   + A  +F  M   GC      YK L+   C   RR++  + F
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 203/488 (41%), Gaps = 60/488 (12%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I GY  +GD +KA+     M +     ++  YN ++           AL +   M    
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+  +++ LI G  K  K E A  + +EM   G+ PN+ TYT +I G C+  + D A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   MK SGC P+   YN L++G  K      A  L +   ++G  P + +Y+ +IDGL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +      A   + KM E+   P+++ Y  +IR L + GKV++A  L +++   G++PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  +I+ +   G ++                  H F  L                  +
Sbjct: 671 ITYVKMIEAYIMSGKVE------------------HAFNFL-----------------GR 695

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA- 462
           M KAGC P++  +  LI GL       K   L     +   P +    S G       A 
Sbjct: 696 MIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 463 --------------SLQ---TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         S+Q    +V    TAG   +A ++L  +   G  PD   YNSL+  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             +V N++ A+ +FK +  +G       Y  LI  L ++ R ++A   F  M      P 
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 566 PAVYKSLM 573
             V   L+
Sbjct: 869 DVVQAVLI 876



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 203/484 (41%), Gaps = 26/484 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY   G+   AL     M++  C+PD + Y  ++    +      A  ++ EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN VT++ LI+G  K  K + A  +L+ M + G  PN  TY ++I GL + N  
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L   M + G  P+ V Y A+++G CK      AL +     + G +P L +YS L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L +  + +EA   + ++    + PD + Y  MI     +GKV+ A   L  M + G 
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P  + Y  LIKG  +  LL   R   +     D +PN        C         DA  
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALP----DVVPN--------CSFGYQTTDQDAVS 749

Query: 400 LFN-KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           + + K+ +     SV + NAL+  L  AG   +AN L   M           +SQG    
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM-----------ISQG--LC 796

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D+ +  +++        +  A  +   ++  G    +  Y  LI   C++     A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+ + ++   PD V    LI+GL R   ++        M      PS  +Y  L   + +
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 579 RRKF 582
           +R +
Sbjct: 917 KRSW 920



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 10/250 (4%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +    L  L++SG    +  Y++L+    ++G     +  +  +  +G++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           N L +     DA  I  ++ ++  +P    Y S++   CR+     A  ++ Q  ++   
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +  +  + I      G V  A   + EM            T  +I LC  G  ++A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 658 FSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           F   V+ K     P+      LI GLC  G L +A+ +F    ++G        N L+  
Sbjct: 343 F---VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 715 LLFSKDNKKV 724
           L+   +N+++
Sbjct: 400 LV---ENRRI 406


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 268/534 (50%), Gaps = 17/534 (3%)

Query: 128  DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG-KTEV 186
            D   D  +++    +     L   A  V+ +M+    + ++ + ++ +  LSK   KT  
Sbjct: 613  DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            AI +  E  + G+  N  +Y IVI  +CQ+ R  EA+ L L M+  G +PD ++Y+ ++N
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G+C+   +D+   L+   ++ G  P    Y  +I  L R  +  EA   + +M  + I P
Sbjct: 733  GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            D V+Y  +I G  + G ++ A K   +M  R I PD   Y A+I GFC +G + +A  L 
Sbjct: 793  DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             E++ +   P++ TFT LI G C+ G + DA ++ N M +AGC P+V  +  LIDGLCK 
Sbjct: 853  HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 427  GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G+L+ AN L ++M +IG  P +F              +  ++V   C +G I +A K++ 
Sbjct: 913  GDLDSANELLHEMWKIGLQPNIF--------------TYNSIVNGLCKSGNIEEAVKLVG 958

Query: 486  QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   +G   D +TY +L++ +CK G ++ A ++ KE+  KGL+P  VT+  L+NG     
Sbjct: 959  EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018

Query: 546  REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
              ED  ++   M   G  P+   + SL+   C R     A +++        G D ++ +
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078

Query: 606  S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            + ++   +   ++ A     EM  K     ++ Y++ + G  +  +  EA  +F
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 1132



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 227/484 (46%), Gaps = 50/484 (10%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L EL+     V+S  +  +++GY + G+ +K  +    MK    +P+ YIY +++ +  R
Sbjct: 714  LMELKGYTPDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 771

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  A   + EM++   LP+ V ++ LI+G  K G    A K   EM  R I P+  T
Sbjct: 772  ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 831

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            YT +ISG CQI    EA +LF +M   G  PD V +  L+NG+CK   + +A  +     
Sbjct: 832  YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891

Query: 266  KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            + G  P + +Y+ LIDGL +    D A     +M++  ++P++  Y  ++ GL ++G ++
Sbjct: 892  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951

Query: 326  DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +A+KL+ +    G+  DT  Y  L+  +C  G +D+A+ +  E+  +   P   TF +L+
Sbjct: 952  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011

Query: 386  CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             G C +GM++D +KL N M   G  P+   FN+L+   C    L+ A  ++  M      
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM------ 1065

Query: 446  TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                      C+ G+                 PD  TY +L+ G
Sbjct: 1066 --------------------------CSRGV----------------GPDGKTYENLVKG 1083

Query: 506  FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             CK  N+  A  LF+E++ KG      TY  LI G  +  +  +A  +F QM + G    
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143

Query: 566  PAVY 569
              ++
Sbjct: 1144 KEIF 1147



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 19/377 (5%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +D   +   F +    +   G++ +A+++F KM   G   SV   N  +  L K      
Sbjct: 612 KDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA 671

Query: 432 ANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             ++ ++   E+G                 + AS   ++   C  G I +A+ +L+ +  
Sbjct: 672 TAIIVFREFPEVGV--------------CWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 717

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD+I+Y++++NG+C+ G ++   KL + ++ KGL+P+S  YG++I  L R+ +  +
Sbjct: 718 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 777

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIE 608
           A   F +M + G  P   VY +L+   C+R     A   + + + RDI+         I 
Sbjct: 778 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 837

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F Q G++  A +   EM  K  +     +T  + G C+ G +K+A  + + +++     
Sbjct: 838 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 897

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   LI GLCK G LD A ++     K G  L+P +  Y        K      A  
Sbjct: 898 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVK 955

Query: 729 LLCRMKSVGYDLDACLY 745
           L+   ++ G + D   Y
Sbjct: 956 LVGEFEAAGLNADTVTY 972



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            +++G  K G+ E+A++  G+ +      D   Y  +++   +      A  +  EM+   
Sbjct: 940  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              P IVTF++L+NG    G  E   K+L+ M  +GI PN  T+  ++   C  N    A 
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 1059

Query: 224  RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             ++  M   G  PD   Y  L+ G CK R + EA  L +  +  GF   + +YS LI G 
Sbjct: 1060 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1119

Query: 284  FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             + K++ EA   + +M  E +  D                 K+     SD + +G  PDT
Sbjct: 1120 LKRKKFLEAREVFDQMRREGLAAD-----------------KEIFDFFSDTKYKGKRPDT 1162


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/650 (27%), Positives = 298/650 (45%), Gaps = 63/650 (9%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D Y Q L E    N+ + + V    I+   K G+   A     K+ +   +PD + Y +
Sbjct: 213 MDRYHQILREGLQPNLLIYNSV----INALCKDGNVRDAESIINKVFKSGMKPDTFTYTS 268

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++    R +    A  ++  M +  C PN  T+S LINGL  SG+   A+  + EMT+ G
Sbjct: 269 MILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHG 328

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF-------------------- 238
           +LP   T+T  I  LC + R ++A+++F+ MK  GC P+                     
Sbjct: 329 VLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLF 388

Query: 239 ------------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
                       V YNAL+N   +   +D AL +     K G +P   SY+ LI G    
Sbjct: 389 HRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTI 448

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              ++A +    M + +  P +V Y ++I+G  ++G    A+++L  M+  G  PD + Y
Sbjct: 449 GDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSY 508

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LI GFC +  ++ A  +  E+  R   PN  T+T LI G C++  +D A ++  +M++
Sbjct: 509 TELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
           +GC P+V  +N LI GL K      A  L   M       L  ++S       D  +  T
Sbjct: 569 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM-------LEEKISP------DVVTYST 615

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G I  A ++  ++ + G LP++ TY+SLI    + G +  A ++F EL+ +G
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L PD VTY  +I       + + AF   G+M   GC P+   Y  L+             
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIK----------GL 725

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG-LLEMDFKLNDFQLAPYTIWLIGL 645
              + Y + ++  +  S  + ++ +   +V + +   L E+DF+L+  QL  Y   L  L
Sbjct: 726 QNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSR-QL--YDALLSRL 782

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
            + G+  EA N++  +V         +    +  L +   +DLAMDVF +
Sbjct: 783 SRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKH 832



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 262/564 (46%), Gaps = 55/564 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +I   S   +   A+  LD  +QRG     FTYT ++  L ++N        + ++   G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+ + YN+++N  CK   V +A +++    K G  P   +Y+ +I G  R +  D A+
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M EE  EP+   Y  +I GL  +G+V +A+  +S+M   G++P  + + A I   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG-------------MCRNGMV------ 394
           CD+G ++ A  + +++ K+   PN +T+T LI G             M R+G+V      
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 395 -------------DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
                        D A  +FN M K GC P+   +N LI G C  G+ EKA  +   M  
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 442 GK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           G+  PTL               +   +++ YC +G    A ++L  +  +G  PD  +Y 
Sbjct: 464 GRPTPTL--------------VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYT 509

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+GFCK+  +  A  +F E+  +GL P+ VTY  LI+G  + ++ + A R+  +M ++
Sbjct: 510 ELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS 569

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC P+   Y  L+    ++  FS A  L    L +    D  +  ++   L       AI
Sbjct: 570 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNN---GAI 626

Query: 621 QGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
              LEM  K+      P    Y+  +  L Q+G+V+EA  +FS L +   I    + VK+
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNG 700
           I      G +D A D FL  + N 
Sbjct: 687 IEVCVMSGKVDRAFD-FLGEMINA 709



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 158/671 (23%), Positives = 303/671 (45%), Gaps = 36/671 (5%)

Query: 33  TVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           T TS+I+   + ++    F  F    +     + A+ S +I+ L      +     + E+
Sbjct: 265 TYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
               V      F   I     +G  E A + F  MK+  C+P+VY Y ++++    +++ 
Sbjct: 325 TRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS---GQRVS 381

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
            +A+ +++ M +   +PN VT++ L+N L ++ + + A+ + + M + G LPN  +Y  +
Sbjct: 382 RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNEL 441

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G C I   ++A  +   M     +P  V YN ++ G+C     D A+ +L   + +G 
Sbjct: 442 IRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   SY+ LI G  +  + + A   + +M +  + P+ V Y  +I G  +  K+  A +
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L  M+  G  P+   YN LI G         A  L   + +    P+  T++ +I G+C
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
            NG +  A ++FNKM K GC P++  +++LI  L + G +E+A  +F +++         
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK--------- 672

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
              QG   + D+ +   M+E    +G + +A+  L ++  +G  P + TY+ LI G    
Sbjct: 673 --KQG--LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG---- 724

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF-GQMPQNGCTPSPAV 568
             +   +   K + L      S     +IN        +D   +   ++ +     S  +
Sbjct: 725 --LQNEMVYHKLVALPNAASTSTFDDQIIN--------KDVISVLSSKLAELDFELSRQL 774

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           Y +L++   R  ++  A +L+   +      + ++ K  +   L+  +V+ A+     M 
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            +  +  L  Y   +  LCQ  + KEA  +F  ++             LI+GL   GY D
Sbjct: 835 DQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKD 894

Query: 688 LAMDVFLYTLK 698
           L M+ FL+ ++
Sbjct: 895 LCME-FLHIME 904



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 120/311 (38%), Gaps = 54/311 (17%)

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G  R+H       M++       + +A   L   ++ G    + TY +L+    K+   +
Sbjct: 158 GRARIH-------MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTS 210

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +  + ++  +GL+P+ + Y ++IN L +     DA  I  ++ ++G  P    Y S++
Sbjct: 211 TVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMI 270

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              CR R    AF ++         R DE          +G   NA              
Sbjct: 271 LGYCRNRDLDSAFEIF--------NRMDE----------EGCEPNA-------------- 298

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             A Y+  + GLC  G+V EAL+  S +     + T  +    I  LC  G ++ A  +F
Sbjct: 299 --ATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLP 753
           +   K G   +P V  Y   + L S       A  L  RM   G   +   Y    ++L 
Sbjct: 357 IDMKKKG--CKPNVYTY---TSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVL- 410

Query: 754 GPWNTREMENM 764
                  MENM
Sbjct: 411 -------MENM 414


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 284/592 (47%), Gaps = 51/592 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSK 180
           +M +  C P+V+ YN +L     +     AL +   M     +C P++V+++ +ING  K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A     EM  RGILPN  TY+ +I+ LC+    D+A  +   M  +G  P+   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN++++G+C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  ++P++  YG +++G +  G + +   LL  M   GI P+ Y ++ LI  +   G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           QA  +  ++ ++   P+T T+  +I  +C++G V+DA + F +M      P   ++N+LI
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             LC   + +KA  L  +M           L +G     D     ++++ +C  G + ++
Sbjct: 452 HSLCIFDKWDKAKELILEM-----------LDRG--ICLDTIFFNSIIDSHCKEGRVIES 498

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   +   G  PDIITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++          
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV---------- 608

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                        G  E+  Q            +L+ Y I L GLC++    EAL +F  
Sbjct: 609 -------------GITESGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L      +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 694



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 268/617 (43%), Gaps = 90/617 (14%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKE--FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + +L+ G       ++ALE    M +   DC PDV  Y  V+N  F++     A   Y+E
Sbjct: 165 YNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+    LPN+VT+S +I  L K+   + A+++L  M + G++PN  TY  ++ G C   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA     KM   G  PD V YN+L++  CK  R  EA  +  S  K G  P + +Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 279 LIDGLF-----------------------------------RAKRYDEAYAWYRKMFEEK 303
           L+ G                                     +  + D+A   + KM ++ 
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD V YG +I  L ++G+V+DAM+    M +  + P    YN+LI   C     D+A+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L +E+  R    +T  F  +I   C+ G V +++KLF+ M + G  P +  ++ LIDG 
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C AG++++A  L   M  +G  P              D  +  T++  YC    +  A  
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKP--------------DCVTYNTLINGYCKISRMEDALV 570

Query: 483 ILMQLAESGNLPDII-----------------------------------TYNSLINGFC 507
           +  ++  SG  PDII                                   TYN +++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K    + AL++F+ L L  L+ ++ T+  +I  L +V R ++A  +F  +  NG  P   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            Y SLM  +   +            + +     +  M +  + + LQ+G++  A   L  
Sbjct: 691 TY-SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749

Query: 626 MDFKLNDFQLAPYTIWL 642
           +D K    + +  +++L
Sbjct: 750 IDEKHFSLEASTASLFL 766



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 244/557 (43%), Gaps = 13/557 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L +  + S++I+ L K    D   + L  
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM     +PDV  YN++++   +   
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P I T+  L+ G +  G       +LD M + GI PN + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +PD V Y  ++   CK  RV++A+        + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI  L    ++D+A     +M +  I  D + +  +I    + G+V ++ 
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   Y+ LI G+C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 607

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 608 VGITESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           VG  + A  LF  L   GL PD  TY  +   L      E+   +F  M +NGCT +  +
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 726

Query: 569 YKSLMTWSCRRRKFSLA 585
             S++    +R   + A
Sbjct: 727 LNSIVRKLLQRGDITRA 743



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 144/574 (25%), Positives = 255/574 (44%), Gaps = 68/574 (11%)

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVA 240
            E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P+   
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCT 93

Query: 241 Y-----------------------------------NALLNGFCKLRRVDEALAL-LRSF 264
           Y                                     LL G C  +R  +A+ + LR  
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAG 322
            + G +P + SY+ L+ GL    R  EA    + M ++  +  PDVV Y  +I G  + G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +  A     +M +RGI+P+   Y+++I   C    +D+A  +   + K   +PN  T+ 
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EI 441
            ++ G C +G   +A     KM   G  P V  +N+L+D LCK G   +A  +F  M + 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P +               +  T+++ Y T G + + + +L  +  +G  P+   ++ 
Sbjct: 334 GLKPEI--------------TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           LI  + K G ++ A+ +F +++ +GL PD+VTYGT+I  L +  R EDA R F QM    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAI 620
            +P   VY SL+   C   K+  A  L L+ L      D     S I+   ++G V  + 
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES- 498

Query: 621 QGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KL 676
           + L ++  ++     +  Y+  + G C  G++ EA  + + +V   ++   P CV    L
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV---SVGMKPDCVTYNTL 555

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           I+G CK   ++ A+ +F     +G  + P +  Y
Sbjct: 556 INGYCKISRMEDALVLFREMESSG--VSPDIITY 587



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 41/397 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y K G  ++A+  F KM++    PD   Y  V+ I  +      A+  + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 160 VKLNCLPNIVTFSLLINGLS-----------------------------------KSGKT 184
           +     P  + ++ LI+ L                                    K G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             + K+ D M + G+ P+  TY+ +I G C   + DEA +L   M   G  PD V YN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK+ R+++AL L R  E  G  P + +Y+ ++ GLF+ +R   A   Y  + E   
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           + ++  Y +++ GL +     +A+++  ++    +  +T  +N +I     +G  D+A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +     +P+  T++++   +   G++++   LF  ME+ GC  +  M N+++  L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 425 KAGELEKANLLFYKME------IGKNPTLFLRLSQGG 455
           + G++ +A    + ++           +LFL L  GG
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGG 772



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 213/468 (45%), Gaps = 36/468 (7%)

Query: 292 AYAWYRKMFE---EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           A + Y +M     +++ P++  YG++I     AG++      L ++ ++G   D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 349 LIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           L+KG C     D+  S  ++I  R       +PN  ++ IL+ G+C      +A +L   
Sbjct: 132 LLKGLC----ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 404 MEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHD 460
           M   G  C P V  +  +I+G  K G+L+KA   +++M + G  P +             
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV------------- 234

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++   C A  + KA ++L  + ++G +P+  TYNS+++G+C  G    A+   K
Sbjct: 235 -VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT-WSCRR 579
           ++   G+ PD VTY +L++ L +  R  +A ++F  M + G  P    Y +L+  ++ + 
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
               +   L L     I          I  + ++G+V+ A+    +M  +  +     Y 
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTL 697
             +  LC+ G+V++A+  F  +++ +  ++P + V   LIH LC     D A ++ L  L
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             G  L     N ++ S    K+ + + +  L   M  +G   D   Y
Sbjct: 472 DRGICLDTIFFNSIIDS--HCKEGRVIESEKLFDLMVRIGVKPDIITY 517



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+GY K+   E AL  F +M+     PD+  YN +L   F+ +    A  +Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +      + T++++++GL K+  T+ A++M   +    +     T+ I+I  L ++ R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 220 DEAYRLF-----------------------------------LKMKDSGCSPDFVAYNAL 244
           DEA  LF                                   L M+++GC+ +    N++
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    +   +  A   L   ++  F     + S  +D L    +Y E + +  + ++  I
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQEYHRFLPEKYKSFI 789

Query: 305 E 305
           E
Sbjct: 790 E 790


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 161/601 (26%), Positives = 283/601 (47%), Gaps = 59/601 (9%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           V F  F   A +    S  + + ++S L+K N   + +Q  D +    V+    +F  ++
Sbjct: 145 VVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMV 204

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           + +   G  + A+E F KM++    P+V  YN +++   +      A     +M K    
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVK 264

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++VT+ +LINGL K  + + A  +L EM+ RG  PN   Y  +I G C+I     A ++
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M  +G SP+ V  N+L+ G+CK  +++ A  LL      G V   G+++ +I  L  
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384

Query: 286 AKRYDEAY------------------------------------AWYRKMFEEKIEPDVV 309
             R+D A                                      WYR + E+    + V
Sbjct: 385 KCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR-LLEKGFAANTV 443

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
               +I GL EAG  ++A KLL +M ERG+V D+  YN LI   C  G +++   L+ E+
Sbjct: 444 TSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEM 503

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            +R   P+ +T+ +L+ G+C  G +++A  L+++ +K G FP    +  +IDG CKA  +
Sbjct: 504 VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRV 563

Query: 430 EKANLLFYK---MEIGKNP----TLFLRLSQGGN-----RVHD----------KASLQTM 467
           E+   LF +   M+I +N     TL     + GN     R+ D           A+  ++
Sbjct: 564 EEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +      GL+  A ++L ++ + G  P+++ Y +LI G+CK+G ++    + +E+ +  +
Sbjct: 624 IHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNV 683

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+ +TY  +ING  ++   + A ++  +M Q G  P    Y +L    C+  K   A  
Sbjct: 684 HPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALK 743

Query: 588 L 588
           +
Sbjct: 744 V 744



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 293/645 (45%), Gaps = 61/645 (9%)

Query: 144 FRKQLFLLALAVYYEMVKL----NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +  Q   L   V +E+  L       P++ T + L++ L K+ + +++ ++ D M   G+
Sbjct: 134 YSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGV 193

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            P+ + ++ +++  C   R D+A  LF KM+  G +P+ V YN +++G CK  R+DEA  
Sbjct: 194 TPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQ 253

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
                EK+   P L +Y  LI+GL + +R+DEA    ++M +    P+ V+Y  +I G  
Sbjct: 254 FKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYC 313

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ------------- 366
             G +  A+++  DM   GI P++   N+LI+G+C    ++ A  L              
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG 373

Query: 367 ----------------------VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
                                 +E+  R+  PN    T+L+ G+C+NG   +A +L+ ++
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            + G   +    NALI GLC+AG  E+A  L  +M           L +G   V D  S 
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM-----------LERG--LVLDSISY 480

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++   C  G + + +K+  ++   G  PD+ TYN L++G C +G I  A  L+ E + 
Sbjct: 481 NTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKK 540

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  PD+ TYG +I+G  + +R E+  ++F +M       +  VY +L+   C       
Sbjct: 541 NGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMRE 600

Query: 585 AFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           AF L      R I          I      G V++A Q L EM  +     +  YT  + 
Sbjct: 601 AFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIG 660

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNG 700
           G C+ GQ+ +   + S+L E       P+ +    +I+G CK G +  A  +     + G
Sbjct: 661 GYCKLGQMHK---VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG 717

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +  P    Y   +  F K+ K   A  +   M + G  LD   Y
Sbjct: 718 IV--PDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITY 760



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 240/488 (49%), Gaps = 19/488 (3%)

Query: 61  RSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R +A N+ V + L+    +        Q  D++ S  +S  S     LI GY K    E 
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEH 355

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A     +M       +   + +V++    K  F  AL    EM+  N  PN    +LL++
Sbjct: 356 AEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVS 415

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL ++GK   AI++   + ++G   N  T   +I GLC+    +EA +L  +M + G   
Sbjct: 416 GLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVL 475

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D ++YN L+   CK  +V+E   L     + G  P + +Y+ L+ GL    + +EA   +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +  +    PD   YG+MI G  +A +V++  KL  +M    I  +   Y  LI+ +C+ 
Sbjct: 536 HECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCEN 595

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G + +A  L+ ++  R     + T++ LI G+   G+VD A +L ++M K G  P+V  +
Sbjct: 596 GNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCY 655

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAG 475
            ALI G CK G++ K + +  +M I              N VH +K +   M+  +C  G
Sbjct: 656 TALIGGYCKLGQMHKVDSILQEMSI--------------NNVHPNKITYTIMINGHCKLG 701

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A K+L ++A+ G +PD +TYN+L NGFCK G +  ALK+   +   G+  D +TY 
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYT 761

Query: 536 TLINGLQR 543
           TLI+G  +
Sbjct: 762 TLIDGWHK 769


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 239/442 (54%), Gaps = 19/442 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A + +++ +  LP +V F+ L+  L K       I +  +M    I PN +T TI+I+
Sbjct: 53  AVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILIN 112

Query: 212 GLCQINR--ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
            LC  NR     A+    KM   G  P  V +  LLNG C   ++ +A+ L     K GF
Sbjct: 113 CLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGF 172

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P L +Y+ +I GL +      A    +KM E+  +PDVV Y  +I  L +  +  +AM 
Sbjct: 173 APSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY 232

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
             S+M ++GI P+   Y++++ GFC+LG L++A SL  ++  R+ +PNT TFTIL+ G+C
Sbjct: 233 FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLC 292

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN--PTL 447
           + GM+ +A+++F  M + G  P    ++AL+DG C   ++++A  LF  M +GK   P++
Sbjct: 293 KEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM-VGKGFAPSV 351

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                    RV++      ++  +C +  +++A  +L ++ +    PD +TY++L+ GFC
Sbjct: 352 ---------RVYN-----ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFC 397

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G    A KLFKE+   GL PDS+TY  L++GL +    ++AFR+   M ++   P   
Sbjct: 398 QAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHIC 457

Query: 568 VYKSLMTWSCRRRKFSLAFSLW 589
           +Y  L+   C   K   A  L+
Sbjct: 458 IYNILIQGMCNFGKLEAARELF 479



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 244/516 (47%), Gaps = 66/516 (12%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A  + GKM +   QP    +  +LN    K   + A+ ++ E+ K+   P+++T++ +I 
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K G T  A+++L +M ++G  P+   Y  VI  LC+  RA+EA   F +M D G  P
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V Y+++L+GFC L +++EA +L +       +P   +++ L+DGL +     EA   +
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M E  +EPD   Y  ++ G     ++ +A KL   M  +G  P    YN LI G C  
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             L++A++L  E++ RD  P+T T++ L+ G C+ G    AQKLF +M   G  P    +
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           + L+DGLCK G L++A                                            
Sbjct: 425 SILLDGLCKHGHLDEA-------------------------------------------- 440

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
               +++L  + ES   P I  YN LI G C  G +  A +LF  L +KG++P  VTY  
Sbjct: 441 ----FRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +I+GL +     +A  +F +M  NGC P+   Y   +                  +LR+ 
Sbjct: 497 MISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG----------------FLRN- 539

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
            G    +++ IEE + +G   ++    + +D + ND
Sbjct: 540 -GDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESND 574



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 271/547 (49%), Gaps = 20/547 (3%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           T     + N+S  S       S Y  +     A+ SF ++      P V ++N +L    
Sbjct: 21  TTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLV 80

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV--AIKMLDEMTQRGILPN 202
           +K+ +   +++  +M   N  PN+ T ++LIN L  S +  V  A   L +M + G+ P 
Sbjct: 81  KKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPT 140

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  +++GLC   +  +A +LF ++   G +P  + Y  ++ G CK+     AL LL+
Sbjct: 141 HVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLK 200

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             E+ G  P + +Y+ +ID L + +R +EA  ++ +M ++ I P+VV Y  ++ G    G
Sbjct: 201 KMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLG 260

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++ +A  L   M  R ++P+T  +  L+ G C  G++ +AR +   + +    P+ +T++
Sbjct: 261 QLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYS 320

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            L+ G C    +D+AQKLF+ M   G  PSV ++N LI+G CK+  L +A  L  +M   
Sbjct: 321 ALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEM--- 377

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                        +   D  +  T+++ +C AG    A K+  ++   G LPD ITY+ L
Sbjct: 378 ----------YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           ++G CK G+++ A +L K +Q   + P    Y  LI G+    + E A  +F  +   G 
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK---SIEEFLQKGEVENA 619
            PS   Y  +++   +    + A  ++ + +  ++G    S     +I+ FL+ G+  NA
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMV--VNGCLPNSCTYNVAIQGFLRNGDPSNA 545

Query: 620 IQGLLEM 626
           ++ + EM
Sbjct: 546 VRLIEEM 552



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 218/440 (49%), Gaps = 48/440 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G  K+G    AL+   KM+E  C+PDV  YN V++   + +    A+  + EM
Sbjct: 178 TYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM 237

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN+VT+S +++G    G+   A  +  +M  R ++PN  T+TI++ GLC+    
Sbjct: 238 VDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA R+F  M ++G  PD   Y+AL++G+C   ++DEA  L       GF P +  Y+ L
Sbjct: 298 LEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNIL 357

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +++R +EA     +M++  + PD V Y  +++G  +AG+ + A KL  +M   G+
Sbjct: 358 INGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGL 417

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD+  Y+ L+ G C  G LD+A  L   + +    P+   + ILI GMC  G ++ A++
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF+ +   G  PSV  +  +I GL K G   +A  +F KM +                  
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVV------------------ 519

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                         +G LP+  TYN  I GF + G+ + A++L 
Sbjct: 520 ------------------------------NGCLPNSCTYNVAIQGFLRNGDPSNAVRLI 549

Query: 520 KELQLKGLRPDSVTYGTLIN 539
           +E+  +G   DS T+  L++
Sbjct: 550 EEMVGRGFSADSSTFQMLLD 569



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 228/514 (44%), Gaps = 55/514 (10%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V +N LL    K +     ++L +  +     P + + + LI+ L  + R    +A+
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 296 YR--KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               KMF+  ++P  V +G ++ GL    K+ DA+KL  ++ + G  P    Y  +IKG 
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +G    A  L  ++ ++   P+   +  +I  +C++   ++A   F++M   G  P+V
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +++++ G C  G+L +A  LF +M IG+N             + +  +   +V+  C 
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQM-IGRNV------------MPNTVTFTILVDGLCK 293

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G+I +A ++   + E+G  PD  TY++L++G+C    ++ A KLF  +  KG  P    
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LING  +  R  +A  +  +M     TP    Y +LM   C+               
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ--------------- 398

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
              +GR   + K  +E    G + ++I                 Y+I L GLC+ G + E
Sbjct: 399 ---AGRPQVAQKLFKEMCSYGLLPDSIT----------------YSILLDGLCKHGHLDE 439

Query: 654 ALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           A  +   + E K  + P  C+   LI G+C  G L+ A ++F      G  ++P V  Y 
Sbjct: 440 AFRLLKAMQESK--IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG--IQPSVVTYT 495

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +      K+     A  +  +M   G   ++C Y
Sbjct: 496 VMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTY 529



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 147/293 (50%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           NV   +  F +L+ G  K G   +A   F  M E   +PD Y Y+A+++    +     A
Sbjct: 276 NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEA 335

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++  MV     P++  +++LING  KS +   A  +L EM  R + P+  TY+ ++ G
Sbjct: 336 QKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQG 395

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQ  R   A +LF +M   G  PD + Y+ LL+G CK   +DEA  LL++ ++    P 
Sbjct: 396 FCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPH 455

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +  Y+ LI G+    + + A   +  +F + I+P VV Y VMI GL + G   +A ++  
Sbjct: 456 ICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFR 515

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            M   G +P++  YN  I+GF   G    A  L  E+  R    ++ TF +L+
Sbjct: 516 KMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 158/374 (42%), Gaps = 53/374 (14%)

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           LP    F  L+  + +         L  +M+ +   P+V     LI+ LC +    + ++
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHS---NRDHV 122

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
            F    +GK   L L+ +          +  T++   C+   I  A K+  ++ + G  P
Sbjct: 123 HFAFSALGKMFKLGLQPTH--------VTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAP 174

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            +ITY ++I G CK+G+   AL+L K+++ KG +PD V Y T+I+ L +  R  +A   F
Sbjct: 175 SLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFF 234

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M   G  P+   Y S++   C   + + A SL+ Q +    GR+              
Sbjct: 235 SEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMI----GRN-------------- 276

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            + N +                 +TI + GLC++G + EA  +F ++ E        +  
Sbjct: 277 VMPNTVT----------------FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYS 320

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            L+ G C +  +D A  +F   +  GF    RV N L+      K  +   A  LL  M 
Sbjct: 321 ALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING--HCKSRRLNEAKTLLSEM- 377

Query: 735 SVGYDLDACLYPKT 748
              YD D  L P T
Sbjct: 378 ---YDRD--LTPDT 386



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 8/228 (3%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           +S  LNE  T+L  +   +  L P    ++ +T+     +   PQV  + F        L
Sbjct: 363 KSRRLNEAKTLLSEM--YDRDLTP--DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
               + S ++  L K    D  ++ L  ++   +     ++ +LI G    G  E A E 
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F  +     QP V  Y  +++   ++ L   A  ++ +MV   CLPN  T+++ I G  +
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLR 538

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +G    A+++++EM  RG   +  T+ +++     +   DE    F++
Sbjct: 539 NGDPSNAVRLIEEMVGRGFSADSSTFQMLL----DLESNDEIISRFMR 582


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 258/528 (48%), Gaps = 22/528 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L+S  + V  +    L+ G  KVG  + A E + ++     Q +VY  N ++N   + Q 
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                +   +M +    P++VT++ LIN   + G  E A +++D M+ +G+ P  FTY  
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC+  +   A  +  +M   G SPD   YN LL   C+   + +A  +       G
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP L S+S LI  L +    D+A  ++R M    + PD V+Y ++I G    G + +A+
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M E+G   D   YN ++ G C   +L +A  L  E+ +R   P+ +TFT LI G 
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGY 613

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNP 445
            ++G ++ A  LF  M +    P V  +N LIDG CK  E+EK N L+  M    I  N 
Sbjct: 614 XKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNH 673

Query: 446 TLFLRLSQG---------GNRVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQ 486
             +  L  G           R+ D+           +  T+V+ YC AG   KA + L  
Sbjct: 674 ISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSN 733

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G +PD ITYN+LINGF K  N++ A  L  +++  GL PD +TY  ++NG  R  R
Sbjct: 734 MLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 793

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            ++A  I  +M + G  P  + Y SL+     +     AF +  + L+
Sbjct: 794 MQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 841



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 238/465 (51%), Gaps = 13/465 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y + G  E+A E    M     +P V+ YNA++N   +   +L A  V  EM
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K+   P+  T+++L+    ++     A ++ DEM  +G++P+  +++ +I  L +    
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A + F  MK++G +PD V Y  L+ GFC+   + EAL +     + G    + +Y+ +
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL + K   EA   + +M E  + PD   +  +I G  + G +  A+ L   M +R +
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI GFC    +++   L  ++  R   PN  ++ ILI G C  G V +A +
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L+++M + G   ++   N ++ G C+AG   KA+     M           L +G   V 
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM-----------LLKG--IVP 741

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++  +     + +A+ ++ ++  SG LPD+ITYN ++NGF + G +  A  + 
Sbjct: 742 DGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIM 801

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            ++  +G+ PD  TY +LING    +  ++AFR+  +M Q G  P
Sbjct: 802 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/431 (28%), Positives = 206/431 (47%), Gaps = 13/431 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+G  K G   +A     +M +    PD   YN +L    R    + A  ++ EM
Sbjct: 430 TYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM 489

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P++V+FS LI  LSK+G  + A+K   +M   G+ P+   YTI+I G C+    
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA ++  +M + GC  D V YN +LNG CK + + EA  L     + G  P   +++ L
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +    ++A   +  M +  ++PDVV Y  +I G  +  +++   +L +DM  R I
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  LI G+C++G + +A  L  E+ ++       T   ++ G CR G    A +
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             + M   G  P    +N LI+G  K   +++A  L  KME   N  L          + 
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME---NSGL----------LP 776

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++  +   G + +A  I++++ E G  PD  TY SLING     N+  A ++ 
Sbjct: 777 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 836

Query: 520 KELQLKGLRPD 530
            E+  +G  PD
Sbjct: 837 DEMLQRGFVPD 847



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 259/610 (42%), Gaps = 67/610 (10%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           ++A+++I  R +    A AV   MV+                  KSG + V I     +T
Sbjct: 239 FSAMIHILVRSRRLPDAQAVILRMVR------------------KSGVSRVEIVESLVLT 280

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                 N   + +++    Q  +  E    F  +K  G      A N+LL G  K+  VD
Sbjct: 281 YGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVD 340

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A  + +   + G    + + + +I+ L + ++ +   ++   M E+ + PDVV Y  +I
Sbjct: 341 LAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLI 400

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
                 G +++A +L+  M  +G+ P  + YNA+I G C  G   +A+ +  E+ K    
Sbjct: 401 NAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS 460

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+T T+ IL+   CRN  + DA+++F++M   G  P +  F+ALI  L K G L++A   
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F  M   KN  L            D      ++  +C  G++ +A K+  ++ E G   D
Sbjct: 521 FRDM---KNAGL----------APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLD 567

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+++NG CK   ++ A +LF E+  +G+ PD  T+ TLING  +      A  +F 
Sbjct: 568 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE 627

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M Q    P    Y +L+   C+  +      LW                   + + +  
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW------------------NDMISRRI 669

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             N I                 Y I + G C  G V EA  ++  +VE     T  +C  
Sbjct: 670 YPNHIS----------------YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           ++ G C+ G    A +     L  G +      N L+    F K+     A+ L+ +M++
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING--FIKEENMDRAFALVNKMEN 771

Query: 736 VGYDLDACLY 745
            G   D   Y
Sbjct: 772 SGLLPDVITY 781



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 208/430 (48%), Gaps = 15/430 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K   +      LDE+    +S  +  + +L+    +  +   A   F +M  
Sbjct: 432 NAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS 491

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD+  ++A++ +  +      AL  + +M      P+ V +++LI G  ++G    
Sbjct: 492 QGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSE 551

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ DEM ++G   +  TY  +++GLC+     EA  LF +M + G  PDF  +  L+N
Sbjct: 552 ALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLIN 611

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+ K   +++A+ L     +    P + +Y+ LIDG  +    ++    +  M   +I P
Sbjct: 612 GYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 671

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + + YG++I G    G V +A +L  +M E+G        N ++KG+C  G   +A    
Sbjct: 672 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 731

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +  +P+  T+  LI G  +   +D A  L NKME +G  P V  +N +++G  + 
Sbjct: 732 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 791

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A L+  KM E G NP              D+++  +++  + T   + +A+++  
Sbjct: 792 GRMQEAELIMLKMIERGVNP--------------DRSTYTSLINGHVTQNNLKEAFRVHD 837

Query: 486 QLAESGNLPD 495
           ++ + G +PD
Sbjct: 838 EMLQRGFVPD 847



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 176/363 (48%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F     +  +    S SA+I +L K    D   +   ++++  ++  + ++ +LI G+
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            + G   +AL+   +M E  C  DV  YN +LN   ++++   A  ++ EM +    P+ 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF+ LING  K G    A+ + + M QR + P+  TY  +I G C+ +  ++   L+  
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M      P+ ++Y  L+NG+C +  V EA  L     + GF   + + + ++ G  RA  
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             +A  +   M  + I PD + Y  +I G  +   +  A  L++ M   G++PD   YN 
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++ GF   G + +A  + +++ +R   P+  T+T LI G      + +A ++ ++M + G
Sbjct: 784 ILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 843

Query: 409 CFP 411
             P
Sbjct: 844 FVP 846


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 262/555 (47%), Gaps = 41/555 (7%)

Query: 45  QVGFR--FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           Q G R   F ++A    L      +AV+         D Y + L E    N+ + + V  
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVM---------DRYHRMLSEGVQPNLLIYNAV-- 221

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
             I+   K G+   A     K+ E +  PD + Y +++    RK     AL V+ +M K 
Sbjct: 222 --INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN VT+S LINGL  SG+   A  ++ EM   GILP   T T  I  LC +   ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +RLF+ MK+ GC P+   Y AL++G C    +  A+ L     +DG  P   +Y+ LI+ 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L   +R   A+     M      P++V Y  MI+G    G  K AM ++++M +RG   +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKL 400
              YN +IKG+CD G  +   +L++    RD    P+  ++T LICG C+   ++ A  L
Sbjct: 460 LVTYNTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQ 453
           FN+M   G  P+   + ALIDG CK  +L+ A  L   M+  G  P       L   L++
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 454 GGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIIT 498
             N    +   + M+E+                C  G    A ++  ++ E G LP+++T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+SLI    + G +  A  LF EL+  GL PD +TY  +I       + E AF   G+M 
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 559 QNGCTPSPAVYKSLM 573
           + GC P+   Y  L+
Sbjct: 698 KAGCQPTLWTYGVLI 712



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 269/555 (48%), Gaps = 24/555 (4%)

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  LD ++Q G+    F Y+ ++  L ++         + +M   G  P+ + YNA++N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK   V +A  +++   +    P   +Y+ +I G  R    D A   + +M +E  EP+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  +I GL ++G+V +A  L+ +M   GI+P  +     I   CD+G  + A  L V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++  +   PN +T+T LI G+C +G++  A  LF++M + G FP+   +NALI+ L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            ++ A ++   M   G +P +               +   M++ YC  G   KA  ++  
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNI--------------VTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G+  +++TYN++I G+C  GN   AL++   ++  G +PD  +Y  LI G  ++ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E AF +F +M  +G  P+   Y +L+   C+  K   A SL L++++    R +  +++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL-LEHMKRSGCRPN--VQT 567

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
               +     +N   G  E+   + +  + P    YT  + GLC++G    AL +F+ ++
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           E   +    +   LI  L + G ++ A ++F    ++G I  P    Y+     +    K
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI--PDEITYVKMIEAYIMSGK 685

Query: 723 KVHAYHLLCRMKSVG 737
             HA++ L RM   G
Sbjct: 686 VEHAFNFLGRMIKAG 700



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 247/531 (46%), Gaps = 51/531 (9%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           ++ Y+A+L    R  +    +  Y+ M+     PN++ ++ +IN L K G    A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           ++ +  + P+ FTYT +I G C+ +  D A ++F +M   GC P+ V Y+ L+NG C   
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           RV+EA  L+R     G +P   + +  I  L     Y++A+  +  M  +  EP+V  Y 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL----------------------- 349
            +I GL  +G +K A+ L   M   G+ P+T  YNAL                       
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 350 ------------IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                       IKG+C LG   +A  +   + +R    N  T+  +I G C +G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
            ++ + M   GC P    +  LI G CK  ++E A  LF +M + G  P           
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----------- 528

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              ++ +   +++ YC    +  A  +L  +  SG  P++ TYN LI+G  K  N +GA 
Sbjct: 529 ---NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +L K +  +G+ P+ VTY  +I+GL +      A  +F +M + GC P+   Y SL+   
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQGLLEM 626
            +  K   A +L+ +  R     D+ + +K IE ++  G+VE+A   L  M
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 231/522 (44%), Gaps = 51/522 (9%)

Query: 115 EKALESFGKMKEFDCQPDVY-----------------------------------IYNAV 139
           E A   F  MK   C+P+VY                                    YNA+
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +NI    +    A  V   M +  C PNIVT++ +I G    G  + A+ +++ M QRG 
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             N  TY  +I G C       A R+   M+D GC PD  +Y  L+ GFCK+ +++ A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L      DG  P   +Y+ LIDG  + ++ D A +    M      P+V  Y V+I GL+
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +      A +L   M E GI P+   Y A+I G C  G    A  +  ++ ++  LPN  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYK 438
           T++ LI  + + G V++A+ LF ++E+ G  P    +  +I+    +G++E A N L   
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 439 MEIGKNPTLF-----LRLSQGGNRVHDK--ASLQTMVEQYCTAGLI---HKAYKIL-MQL 487
           ++ G  PTL+     ++  +    + D+  A+L  +V   C+ G       A  ++  +L
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN-CSFGYQTTDQDAVSVMSAKL 755

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           AE      +   N+L++     G    A +L   +  +GL PD   Y +L+  L RV   
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSC---RRRKFSLAF 586
           + A  +F  M   GC      YK L+   C   RR++  + F
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 204/488 (41%), Gaps = 60/488 (12%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I GY  +GD +KA+     M +     ++  YN ++           AL +   M    
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+  +++ LI G  K  K E A  + +EM   G+ PN+ TYT +I G C+  + D A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   MK SGC P+   YN L++G  K      A  L +   ++G  P + +Y+ +IDGL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +      A   + KM E+   P+++ Y  +IR L + GKV++A  L +++   G++PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  +I+ +   G        +VE          H F  L                  +
Sbjct: 671 ITYVKMIEAYIMSG--------KVE----------HAFNFL-----------------GR 695

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA- 462
           M KAGC P++  +  LI GL       K   L     +   P +    S G       A 
Sbjct: 696 MIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 463 --------------SLQ---TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         S+Q    +V    TAG   +A ++L  +   G  PD   YNSL+  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             +V N++ A+ +FK +  +G       Y  LI  L ++ R ++A   F  M      P 
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 566 PAVYKSLM 573
             V   L+
Sbjct: 869 DVVQAVLI 876



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 202/482 (41%), Gaps = 26/482 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY   G+   AL     M++  C+PD + Y  ++    +      A  ++ EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN VT++ LI+G  K  K + A  +L+ M + G  PN  TY ++I GL + N  
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L   M + G  P+ V Y A+++G CK      AL +     + G +P L +YS L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L +  + +EA   + ++    + PD + Y  MI     +GKV+ A   L  M + G 
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P  + Y  LIKG  +  LL   R   +     D +PN        C         DA  
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALP----DVVPN--------CSFGYQTTDQDAVS 749

Query: 400 LFN-KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           + + K+ +     SV + NAL+  L  AG   +AN L   M           +SQG    
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM-----------ISQG--LC 796

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D+ +  +++        +  A  +   ++  G    +  Y  LI   C++     A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+ + ++   PD V    LI+GL R   ++        M      PS  +Y  L   + +
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 579 RR 580
           +R
Sbjct: 917 KR 918



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 10/250 (4%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +    L  L++SG    +  Y++L+    ++G     +  +  +  +G++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           N L +     DA  I  ++ ++  +P    Y S++   CR+     A  ++ Q  ++   
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +  +  + I      G V  A   + EM            T  +I LC  G  ++A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 658 FSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           F   V+ K     P+      LI GLC  G L +A+ +F    ++G        N L+  
Sbjct: 343 F---VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 715 LLFSKDNKKV 724
           L+   +N+++
Sbjct: 400 LV---ENRRI 406


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 182/669 (27%), Positives = 309/669 (46%), Gaps = 49/669 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I    K    +   + ++E+R    S+    +  LI G  + G  E+A     +M++
Sbjct: 247 STLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMED 306

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           +   PD + Y A++N   ++     A  +  EM     +PN+V +S LI+G  + G  + 
Sbjct: 307 YGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADE 366

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K++ EM+  G+ PNK TY  +I GLC++ R   A R+  +M   G   D + YN ++ 
Sbjct: 367 AFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIE 426

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +    +EA  LL    K G  P + +YS +I+GL +    + A     +M  + ++P
Sbjct: 427 GHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKP 486

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  +Y  +I G    G    A + L  M    + PD YCYN+LI G  ++G +D+A    
Sbjct: 487 NAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYY 546

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++   PN  T+  LI G    G ++ A++L ++M  +G  P+  ++  +++G  K+
Sbjct: 547 DEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKS 606

Query: 427 GELEKANLLFYKM-EIGKNP------TLFLRLSQGGNR---------------VHDKASL 464
             LEK +     M E G  P       +   LS  G+                V D    
Sbjct: 607 DNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIY 666

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            +++  +C A  + KA  +L ++A+ G  P I  YN+LI+GFCK  +I+ A  +F  +  
Sbjct: 667 GSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC 726

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KGL P+ VTY TLI+G  +     DA  ++ +M   G  P   VY S++   C      L
Sbjct: 727 KGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVY-SVLAAGCSNSG-DL 784

Query: 585 AFSLWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
             +L++    ++  R    + S    +  F ++G+++  ++ L  M  K     L     
Sbjct: 785 QQALFIT--EEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVEN 842

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKA-------------------IVTPPSCVKLIHGLC 681
            +IGL + G++ EA  IF  L +  A                   +V       +I   C
Sbjct: 843 IVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHC 902

Query: 682 KRGYLDLAM 690
           K+GYLD A+
Sbjct: 903 KQGYLDKAL 911



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 285/606 (47%), Gaps = 17/606 (2%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W+    +    +S     +  LI  Y KV D E A +   +M+E  C  +V  YN ++  
Sbjct: 228 WKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R      A     EM     +P+  T+  +INGL K G+ + A  +LDEM+  G++PN
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
              Y+ +I G  +   ADEA+++  +M  +G  P+ + Y+ L+ G CKL R+  A  +L+
Sbjct: 348 VVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILK 407

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              K G++    +Y+ +I+G  R    +EA+    +M +  I P+V  Y ++I GL + G
Sbjct: 408 QMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIG 467

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           + + A  LL  M   G+ P+ + Y  LI G+C  G    A     ++ + +  P+ + + 
Sbjct: 468 ESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYN 527

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EI 441
            LI G+   G +D+A + +++M + G  P+   +  LI G   AG LEKA  L ++M   
Sbjct: 528 SLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNS 587

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G NP  F+                 ++E Y  +  + K    L  + E G +PD   Y  
Sbjct: 588 GLNPNDFI--------------YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +I+     G++  A+ +   ++  GL PDS+ YG+LI+G  +    E A  +  +M + G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAI 620
             P  + Y +L+   C+    S A +++   + + +          I+ + + G++ +AI
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
               EM  +        Y++   G    G +++AL I   ++  +      S   L+HG 
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMI-ARGYAIISSFNTLVHGF 812

Query: 681 CKRGYL 686
           CKRG L
Sbjct: 813 CKRGKL 818



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 176/640 (27%), Positives = 276/640 (43%), Gaps = 90/640 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V  VL+  Y K G      E    MK+    P +   N +L    R     L   V   M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P++ T+S LI    K    E A K+++EM + G   N  TY  +I GLC+    
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA+    +M+D G  PD   Y A++NG CK  R D+A  LL      G +P +  YS L
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV--------------- 324
           IDG  R    DEA+   ++M    ++P+ + Y  +IRGL + G++               
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414

Query: 325 --------------------KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
                               ++A  LL++MR+ GI P+ Y Y+ +I G C +G  ++A  
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++      PN   +  LI G CR G    A +   KM +    P +  +N+LI GL 
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
             G++++A   + +M E G  P  F   + GG           ++  Y  AG + KA ++
Sbjct: 535 NVGKMDEAIEYYDEMLEKGFQPNDF---TYGG-----------LIHGYSMAGNLEKAEQL 580

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L Q+  SG  P+   Y  ++ G+ K  N+       K +  KGL PD+  YG +I+ L  
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               + A  +   + +NG  P   +Y SL++  C+                         
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCK------------------------- 675

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                      ++E A+  L EM  K  +  ++ Y   + G C+   +  A NIF+ ++ 
Sbjct: 676 ---------AADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII- 725

Query: 664 CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNG 700
           CK +  PP+CV    LI G CK G +  A+D++   L  G
Sbjct: 726 CKGL--PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 138/338 (40%), Gaps = 18/338 (5%)

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ------GGNRVHDKASL 464
           P+   F  L   LC AG   +AN L  +M I   PT  L LS       G ++      L
Sbjct: 118 PAPDAFAHLAVSLCAAGLYPQANGLLDQM-IRAYPTPPLVLSSVHRALSGSDQGRRPVVL 176

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +V+ Y   G +    ++++ + + G  P +   N L+    +   ++   K+   ++ 
Sbjct: 177 DVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEG 236

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+ PD  TY TLI    +V   E A ++  +M + GC+ +   Y +L+   CR      
Sbjct: 237 AGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEE 296

Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
           AF  + + + D     D       I    ++G  + A   L EM        +  Y+  +
Sbjct: 297 AFG-YKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLI 355

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKN 699
            G  + G   EA   F ++ E  A    P+ +    LI GLCK G +  A  +     K 
Sbjct: 356 DGFMRQGNADEA---FKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           G++      N ++   L  + + K  A+ LL  M+  G
Sbjct: 413 GYMADTMTYNLVIEGHL--RQHNKEEAFLLLNEMRKGG 448


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 283/592 (47%), Gaps = 51/592 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSK 180
           +M +  C P+V+ YN +L           AL +   M     +C P++V+++ +ING  K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A     EM  RGILPN  TY+ +I+ LC+    D+A  +   M  +G  P+   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN++++G+C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  ++P++  YG +++G +  G + +   LL  M   GI P+ Y ++ LI  +   G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           QA  +  ++ ++   P+T T+  +I  +C++G V+DA + F +M      P   ++N+LI
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             LC   + +KA  L  +M           L +G     D     ++++ +C  G + ++
Sbjct: 452 HSLCIFDKWDKAKELILEM-----------LDRG--ICLDTIFFNSIIDSHCKEGRVIES 498

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   +   G  PDIITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING
Sbjct: 499 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++          
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV---------- 608

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                        G  E+  Q            +L+ Y I L GLC++    EAL +F  
Sbjct: 609 -------------GITESGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L      +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 694



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 268/617 (43%), Gaps = 90/617 (14%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKE--FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + +L+ G       ++ALE    M +   DC PDV  Y  V+N  F++     A   Y+E
Sbjct: 165 YNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+    LPN+VT+S +I  L K+   + A+++L  M + G++PN  TY  ++ G C   +
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA     KM   G  PD V YN+L++  CK  R  EA  +  S  K G  P + +Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 279 LIDGLF-----------------------------------RAKRYDEAYAWYRKMFEEK 303
           L+ G                                     +  + D+A   + KM ++ 
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD V YG +I  L ++G+V+DAM+    M +  + P    YN+LI   C     D+A+
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L +E+  R    +T  F  +I   C+ G V +++KLF+ M + G  P +  ++ LIDG 
Sbjct: 465 ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 524

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C AG++++A  L   M  +G  P              D  +  T++  YC    +  A  
Sbjct: 525 CLAGKMDEATKLLASMVSVGMKP--------------DCVTYNTLINGYCKISRMEDALV 570

Query: 483 ILMQLAESGNLPDII-----------------------------------TYNSLINGFC 507
           +  ++  SG  PDII                                   TYN +++G C
Sbjct: 571 LFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K    + AL++F+ L L  L+ ++ T+  +I  L +V R ++A  +F  +  NG  P   
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            Y SLM  +   +            + +     +  M +  + + LQ+G++  A   L  
Sbjct: 691 TY-SLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFM 749

Query: 626 MDFKLNDFQLAPYTIWL 642
           +D K    + +  +++L
Sbjct: 750 IDEKHFSLEASTASLFL 766



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 244/557 (43%), Gaps = 13/557 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R  L +  + S++I+ L K    D   + L  
Sbjct: 200 VSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTS 259

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY   G  ++A+    KM     +PDV  YN++++   +   
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P I T+  L+ G +  G       +LD M + GI PN + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + D+A  +F KM+  G +PD V Y  ++   CK  RV++A+        + 
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    Y+ LI  L    ++D+A     +M +  I  D + +  +I    + G+V ++ 
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ PD   Y+ LI G+C  G +D+A  L   +      P+  T+  LI G 
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   ++DA  LF +ME +G  P +  +N ++ G            LF          L+
Sbjct: 560 CKISRMEDALVLFREMESSGVSPDIITYNIILQG------------LFQTRRTAAAKELY 607

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 608 VGITESGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 666

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           VG  + A  LF  L   GL PD  TY  +   L      E+   +F  M +NGCT +  +
Sbjct: 667 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 726

Query: 569 YKSLMTWSCRRRKFSLA 585
             S++    +R   + A
Sbjct: 727 LNSIVRKLLQRGDITRA 743



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 261/560 (46%), Gaps = 40/560 (7%)

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVA 240
            E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P+   
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCT 93

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKM 299
           Y  L+   C   R+D   A L +  K GF+    +++ ++ GL   KR  +A     R+M
Sbjct: 94  YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRM 153

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLG 357
            +    P+V  Y ++++GL +  + ++A++LL  M + G    PD   Y  +I GF   G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A     E+  R  LPN  T++ +I  +C+   +D A ++   M K G  P+   +N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVHDK--------- 461
           +++ G C +G+ ++A     KM   G  P      +L   L + G     +         
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 462 ------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +  T+++ Y T G + + + +L  +  +G  P+   ++ LI  + K G ++ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++ +GL PD+VTYGT+I  L +  R EDA R F QM     +P   VY SL+  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLN-DF 633
            C   K+  A  L L+ L      D     S I+   ++G V  + + L ++  ++    
Sbjct: 454 LCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKP 512

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
            +  Y+  + G C  G++ EA  + + +V   ++   P CV    LI+G CK   ++ A+
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMV---SVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 691 DVFLYTLKNGFILRPRVCNY 710
            +F     +G  + P +  Y
Sbjct: 570 VLFREMESSG--VSPDIITY 587



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 41/397 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y K G  ++A+  F KM++    PD   Y  V+ I  +      A+  + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 160 VKLNCLPNIVTFSLLINGLS-----------------------------------KSGKT 184
           +     P  + ++ LI+ L                                    K G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             + K+ D M + G+ P+  TY+ +I G C   + DEA +L   M   G  PD V YN L
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK+ R+++AL L R  E  G  P + +Y+ ++ GLF+ +R   A   Y  + E   
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           + ++  Y +++ GL +     +A+++  ++    +  +T  +N +I     +G  D+A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +     +P+  T++++   +   G++++   LF  ME+ GC  +  M N+++  L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 425 KAGELEKANLLFYKME------IGKNPTLFLRLSQGG 455
           + G++ +A    + ++           +LFL L  GG
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGG 772



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/468 (23%), Positives = 215/468 (45%), Gaps = 36/468 (7%)

Query: 292 AYAWYRKMFE---EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           A + Y +M     +++ P++  YG+++     AG++      L ++ ++G + D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131

Query: 349 LIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           ++KG C     D+  S  ++I  R       +PN  ++ IL+ G+C +    +A +L   
Sbjct: 132 MLKGLC----ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQM 187

Query: 404 MEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHD 460
           M   G  C P V  +  +I+G  K G+L+KA   +++M + G  P +             
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV------------- 234

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  +++   C A  + KA ++L  + ++G +P+  TYNS+++G+C  G    A+   K
Sbjct: 235 -VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLK 293

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT-WSCRR 579
           ++   G+ PD VTY +L++ L +  R  +A ++F  M + G  P    Y +L+  ++ + 
Sbjct: 294 KMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKG 353

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
               +   L L     I          I  + ++G+V+ A+    +M  +  +     Y 
Sbjct: 354 ALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG 413

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTL 697
             +  LC+ G+V++A+  F  +++ +  ++P + V   LIH LC     D A ++ L  L
Sbjct: 414 TVIGILCKSGRVEDAMRYFEQMIDER--LSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             G  L     N ++ S    K+ + + +  L   M  +G   D   Y
Sbjct: 472 DRGICLDTIFFNSIIDS--HCKEGRVIESEKLFDLMVRIGVKPDIITY 517



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+GY K+   E AL  F +M+     PD+  YN +L   F+ +    A  +Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +      + T++++++GL K+  T+ A++M   +    +     T+ I+I  L ++ R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 220 DEAYRLF-----------------------------------LKMKDSGCSPDFVAYNAL 244
           DEA  LF                                   L M+++GC+ +    N++
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    +   +  A   L   ++  F     + S  +D L    +Y E + +  + ++  I
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQEYHRFLPEKYKSFI 789

Query: 305 E 305
           E
Sbjct: 790 E 790


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 266/538 (49%), Gaps = 25/538 (4%)

Query: 128  DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS-GKTEV 186
            D   D  +++    +     +   A  V+ +M+    + ++ + ++ +  LSK   KT  
Sbjct: 593  DWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            AI +  E  + G+  N  +Y IVI  +CQ+ R +EA+ L L M+  G +PD ++Y+ ++N
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G+C+   +D+   L+   ++ G  P   +Y  +I  L R  +  EA   + +M  + I P
Sbjct: 713  GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            D ++Y  ++ G  + G ++ A K   +M  R I PD   Y A+I GFC +G + +A  L 
Sbjct: 773  DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             E+  R   P+  TFT L+ G C+ G + DA ++ N M +AGC P+V  +  LIDGLCK 
Sbjct: 833  HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 427  GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G+L+ AN L ++M +IG  P +F              +  ++V   C +G I +A K++ 
Sbjct: 893  GDLDSANELLHEMWKIGLQPNIF--------------TYNSIVNGLCKSGNIEEAVKLVG 938

Query: 486  QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   +G   D +TY +L++ +CK G ++ A ++  E+  KGL+P  VT+  L+NG     
Sbjct: 939  EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHG 998

Query: 546  REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
              ED  ++   M   G  P+   +  L+   C R     A +++    +D+  R  E   
Sbjct: 999  MLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY----KDMCSRGVEPDG 1054

Query: 606  SIEEFLQKGE-----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
               E L KG      ++ A     EM  K     ++ Y++ + G  +  +  EA  IF
Sbjct: 1055 KTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF 1112



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 226/484 (46%), Gaps = 50/484 (10%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L EL+     V+S  +  +I+GY + G+ +K  +   KMK+   +P+ Y Y +++ +  R
Sbjct: 694  LMELKGYTPDVIS--YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCR 751

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  A   + EM+    LP+ + ++ L++G  K G    A K   EM  R I P+  T
Sbjct: 752  ICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT 811

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            YT +ISG CQI    EA +LF +M   G  PD + +  L+NG+CK   + +A  +     
Sbjct: 812  YTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871

Query: 266  KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            + G  P + +Y+ LIDGL +    D A     +M++  ++P++  Y  ++ GL ++G ++
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 326  DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +A+KL+ +    G+  DT  Y  L+  +C  G +D+A+ +  E+  +   P   TF +L+
Sbjct: 932  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991

Query: 386  CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             G C +GM++D +KL N M   G  P+   FN L+   C    L+ A  ++  M      
Sbjct: 992  NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM------ 1045

Query: 446  TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                      C+ G+                 PD  TY +L+ G
Sbjct: 1046 --------------------------CSRGV----------------EPDGKTYENLVKG 1063

Query: 506  FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             C   N+  A  LF+E++ KG      TY  LI G  +  +  +A  IF QM ++G    
Sbjct: 1064 HCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123

Query: 566  PAVY 569
              ++
Sbjct: 1124 KEIF 1127



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 171/377 (45%), Gaps = 19/377 (5%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +D   +   F +    +   GM+ +A+K+F KM   G   SV   N  +  L K      
Sbjct: 592 KDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651

Query: 432 ANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             ++ ++   E+G                 + AS   ++   C  G I++A+ +L+ +  
Sbjct: 652 TAIIVFREFPEVGV--------------CWNVASYNIVIHFVCQLGRINEAHHLLLLMEL 697

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD+I+Y+++ING+C+ G ++   KL ++++ KGL+P+S TYG++I  L R+ +  +
Sbjct: 698 KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAE 757

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIE 608
           A   F +M   G  P   VY +L+   C+R     A   + + + RDI+         I 
Sbjct: 758 AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 817

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F Q G++  A +   EM  +  +  +  +T  + G C+ G +K+A  + + +++     
Sbjct: 818 GFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP 877

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   LI GLCK G LD A ++     K G  L+P +  Y        K      A  
Sbjct: 878 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVK 935

Query: 729 LLCRMKSVGYDLDACLY 745
           L+   ++ G + D   Y
Sbjct: 936 LVGEFEAAGLNADTVTY 952



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            +++G  K G+ E+A++  G+ +      D   Y  +++   +      A  +  EM+   
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              P IVTF++L+NG    G  E   K+L+ M  +GI PN  T+  ++   C  N    A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 224  RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             ++  M   G  PD   Y  L+ G C  R + EA  L +  +  GF   + +YS LI G 
Sbjct: 1040 AIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 284  FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            F+ K++ EA   + +M  + +  D                 K+     SD + +G  PDT
Sbjct: 1100 FKRKKFVEAREIFDQMRRDGLAAD-----------------KEIFDFFSDTKYKGKRPDT 1142


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 244/480 (50%), Gaps = 16/480 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    +M+      ++Y Y+  +N   R+    LALA+  +M+
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+IVT + L+NG     +   A+ ++D+M + G  P+  T+T ++ GL Q N+A 
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L  +M   GC PD V Y A++NG CK    D AL LL   EK      +  Y+ +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL + K  D+A+  + KM  + I+PDV  Y  +I  L   G+  DA +LLSDM E+ I 
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILICGMCRNGMVDDAQK 399
           PD   +NALI  F   G L +A  L  E+ K +   P+   +  LI G C+   V++  +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F +M + G   +   +  LI G  +A + + A ++F +M           +S G   VH
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-----------VSDG---VH 423

Query: 460 -DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++  C  G +  A  +   + +     DI+TY ++I   CK G +     L
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  L LKG++P+ VTY T+++G  R   +E+A  +F +M ++G  P+   Y +L+    R
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 235/468 (50%), Gaps = 25/468 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV FS L++ ++K  K ++ I + ++M   GI  N +TY+I I+
Sbjct: 59  AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A  +  KM   G  P  V  N+LLNGFC   R+ EA+AL+    + G+ P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ L+ GLF+  +  EA A   +M  +  +PD+V YG +I GL + G+   A+ LL
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M +  I  D   YN +I G C    +D A  L  ++  +   P+  T+  LI  +C  
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------------ 439
           G   DA +L + M +    P +  FNALID   K G+L +A  L+ +M            
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358

Query: 440 ------------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                        + +   +F  +SQ G  V +  +  T++  +  A     A  +  Q+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDI+TYN L++G C  GN+  AL +F+ +Q + ++ D VTY T+I  L +  + 
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           ED + +F  +   G  P+   Y ++M+  CR+     A +L+++   D
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 264/572 (46%), Gaps = 52/572 (9%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + AI +  +M +    P+   ++ ++S + ++N+ D    L  +M++ G S +   Y+
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
             +N FC+  ++  ALA+L    K G+ P + + + L++G     R  EA A   +M E 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +PD V +  ++ GL +  K  +A+ L+  M  +G  PD   Y A+I G C  G  D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            +L  ++ K     +   +  +I G+C+   +DDA  LFNKME  G  P V  +N LI  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LC  G    A+ L   M E   NP L                   +++ +   G + +A 
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVF--------------FNALIDAFVKEGKLVEAE 340

Query: 482 KILMQLAESGN-LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           K+  ++ +S +  PD++ YN+LI GFCK   +   +++F+E+  +GL  ++VTY TLI+G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             +    ++A  +F QM  +G  P    Y  L+   C       A  ++           
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF----------- 449

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                   E++QK             D KL+   +  YT  +  LC+ G+V++  ++F  
Sbjct: 450 --------EYMQK------------RDMKLD---IVTYTTMIEALCKAGKVEDGWDLFCS 486

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           L          +   ++ G C++G  + A  +F+   ++G +      N L+R+ L  +D
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL--RD 544

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             +  +  L+  M+S G+  DA  +    ++L
Sbjct: 545 GDEAASAELIKEMRSCGFAGDASTFGLVTNML 576



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 36/376 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ G ++     +A+    +M    CQPD+  Y AV+N   ++    LAL +  +M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K     ++V ++ +I+GL K    + A  + ++M  +GI P+ FTY  +IS LC   R 
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 220 DEAYRLFLKM------------------------------------KDSGCSPDFVAYNA 243
            +A RL   M                                    K   C PD VAYN 
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ GFCK +RV+E + + R   + G V    +Y+ LI G F+A+  D A   +++M  + 
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD++ Y +++ GL   G V+ A+ +   M++R +  D   Y  +I+  C  G ++   
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L   +  +   PN  T+T ++ G CR G+ ++A  LF +M++ G  P+ G +N LI   
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541

Query: 424 CKAGELEKANLLFYKM 439
            + G+   +  L  +M
Sbjct: 542 LRDGDEAASAELIKEM 557



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 2/368 (0%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           AVI+ L K    DL    L+++  G +     ++  +I G  K    + A + F KM+  
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +PDV+ YN +++       +  A  +  +M++ N  P++V F+ LI+   K GK   A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339

Query: 188 IKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            K+ DEM + +   P+   Y  +I G C+  R +E   +F +M   G   + V Y  L++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF + R  D A  + +    DG  P + +Y+ L+DGL      + A   +  M +  ++ 
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  MI  L +AGKV+D   L   +  +G+ P+   Y  ++ GFC  GL ++A +L 
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           VE+ +   LPN+ T+  LI    R+G    + +L  +M   G       F  L+  +   
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHD 578

Query: 427 GELEKANL 434
           G L+K+ L
Sbjct: 579 GRLDKSFL 586


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 238/512 (46%), Gaps = 15/512 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + S ++    K +G+      LDE+R+         + VLI+     GD ++AL   
Sbjct: 285 SVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNIL 344

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +    C+PD   Y  VL      + +     +  EM   NC P+ VTF+ ++  L + 
Sbjct: 345 SNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQ 404

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  + AI+++D M++ G + +  TY+ ++ GLC + R D+A  L  ++K  GC PD +AY
Sbjct: 405 GLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 464

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C   + + A  L+         P   +++ ++  L +    D A     +M E
Sbjct: 465 TTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSE 524

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               PD+V Y  +I GL     + DAM+LLSD++  G  PD   +N L+KG C +   + 
Sbjct: 525 NGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWED 584

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L   + + +  P+  TF  +I  +C+ G++  A +    M + GC P+   ++ ++D
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L KAG+ + A  L   M                N   D  +  T++     AG + +A 
Sbjct: 645 ALLKAGKAQAALELLSGMT---------------NGTPDLITYNTVISNLTKAGKMEEAL 689

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  +  +G  PD  TY SL  G C+    + A+++ + +Q  GL PD+  Y  ++ G 
Sbjct: 690 DLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGF 749

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            R  R + A   F  M  +GC P  + Y  L+
Sbjct: 750 CRDRRTDLAIDCFAHMVSSGCMPDESTYVILL 781



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/581 (27%), Positives = 280/581 (48%), Gaps = 23/581 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
            +VT++ ++NG  ++G+ E A ++++ M      P+ FT+  +I  LC   R  +A  +F
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVF 274

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   GCSP  V Y+ LL+  CK     +A+ALL      G  P + +Y+ LI+ +   
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              DEA      +     +PD V Y  +++ L  + + K+  +LL++M      PD   +
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N ++   C  GL+D+A  +   + +   + +  T++ ++ G+C  G VDDA +L ++++ 
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            GC P    +  ++ GLC   + E+A  L  +M     P              D+ +  T
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP-------------DEVTFNT 501

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +V   C  GL+ +A +++ Q++E+G  PDI+TYN +I+G C    I+ A++L  +LQ  G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            +PD VT+ TL+ GL  VDR EDA ++   M ++ C P    + +++T  C++   + A 
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621

Query: 587 SLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
              L+ + +     + S  SI  +  L+ G+ + A++ L  M     D  L  Y   +  
Sbjct: 622 ET-LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPD--LITYNTVISN 678

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L + G+++EAL++  V+V         +   L +G+C+    D A+ +       G  L 
Sbjct: 679 LTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG--LS 736

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           P    Y    L F +D +   A      M S G   D   Y
Sbjct: 737 PDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTY 777



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 249/547 (45%), Gaps = 24/547 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI      G    AL  F  M    C P V  Y+ +L+   ++  +  A+A+  EM
Sbjct: 253 TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM 312

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++LIN +   G  + A+ +L  +   G  P+  TYT V+  LC   R 
Sbjct: 313 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW 372

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            E   L  +M  + C+PD V +N ++   C+   VD A+ ++    + G V  + +YS +
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL    R D+A     ++     +PD + Y  +++GL    + + A +L+++M     
Sbjct: 433 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC 492

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   +N ++   C  GL+D+A  +  ++ +    P+  T+  +I G+C    +DDA +
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP-------TLFLRLS 452
           L + ++  GC P +  FN L+ GLC     E A  L   M     P       T+   L 
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLC 612

Query: 453 QGGNRVHDKASLQTMVEQYCT---------------AGLIHKAYKILMQLAESGNLPDII 497
           Q G       +L+ M E  C                AG    A ++L  +  +   PD+I
Sbjct: 613 QKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLI 670

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN++I+   K G +  AL L + +   GL PD+ TY +L  G+ R D  + A R+  ++
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV 730

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              G +P    Y  ++   CR R+  LA   +   +      D+ +   + E L  G + 
Sbjct: 731 QDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLL 790

Query: 618 NAIQGLL 624
           +  + LL
Sbjct: 791 DEAKRLL 797



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/585 (25%), Positives = 250/585 (42%), Gaps = 101/585 (17%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  TF+ LI  L   G+   A+ + D+M  RG  P+  TY+I++   C+ +   +A  L
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL 308

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M+  GC PD V YN L+N  C    VDEAL +L +    G  P   +Y+ ++  L  
Sbjct: 309 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCG 368

Query: 286 AKRYDEAYAWYRKMFEEKIEP-----------------------------------DVVL 310
           ++R+ E      +M      P                                   D+V 
Sbjct: 369 SERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  ++ GL + G+V DA++LLS ++  G  PDT  Y  ++KG C     ++A  L  E+ 
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             D  P+  TF  ++  +C+ G+VD A ++  +M + GC P +  +N +IDGLC    ++
Sbjct: 489 CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCID 548

Query: 431 KANLLFYKME-IGKNPTL--FLRLSQG-------------------GNRVHDKASLQTMV 468
            A  L   ++  G  P +  F  L +G                    N   D+ +  T++
Sbjct: 549 DAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVI 608

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  GL+ +A + L  +AE+G +P+  TY+ +++   K G    AL+L     +    
Sbjct: 609 TSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS--GMTNGT 666

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD +TY T+I+ L +  + E+A  +   M  NG  P    Y+SL    CR          
Sbjct: 667 PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCR---------- 716

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW----LIG 644
                                       E+     + M  ++ D  L+P T +    L+G
Sbjct: 717 ----------------------------EDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLG 748

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            C+D +   A++ F+ +V    +    + V L+  L   G LD A
Sbjct: 749 FCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEA 793



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 179/373 (47%), Gaps = 2/373 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S+++  L      D   + L  L+S      +  +  ++ G       E+A E   +M  
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC PD   +N V+    +K L   A+ V  +M +  C P+IVT++ +I+GL      + 
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++L ++   G  P+  T+  ++ GLC ++R ++A +L   M  S C PD + +N ++ 
Sbjct: 550 AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+   + +A+  L+   ++G VP   +YS ++D L +A +   A      M      P
Sbjct: 610 SLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--P 667

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++ Y  +I  L++AGK+++A+ LL  M   G+ PDT  Y +L  G C     D+A  + 
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P+T  +  ++ G CR+   D A   F  M  +GC P    +  L++ L   
Sbjct: 728 RRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYG 787

Query: 427 GELEKANLLFYKM 439
           G L++A  L   +
Sbjct: 788 GLLDEAKRLLASL 800



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 2/272 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L   +  D   + L +L+S         F  L+ G   V   E A +    M   +
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN 596

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PD   +N V+    +K L   A+     M +  C+PN  T+S++++ L K+GK + A+
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL 656

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L  MT     P+  TY  VIS L +  + +EA  L   M  +G  PD   Y +L  G 
Sbjct: 657 ELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGV 714

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+    D A+ +LR  +  G  P    Y+ ++ G  R +R D A   +  M      PD 
Sbjct: 715 CREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDE 774

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             Y +++  L+  G + +A +LL+ +   G++
Sbjct: 775 STYVILLEALAYGGLLDEAKRLLASLCSLGVL 806



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 146/343 (42%), Gaps = 27/343 (7%)

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           L + GE+++A +LF  M  G           GG           ++++ C+ G +  A +
Sbjct: 160 LVQRGEIDEALVLFDSMASG-----------GGRNCPPVVPCNILIKRLCSDGRVSDAER 208

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +   L  S     ++TYN+++NG+C+ G I  A +L   +      PD+ T+  LI  L 
Sbjct: 209 VFAALGPSAT---VVTYNTMVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALC 262

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
              R  DA  +F  M   GC+PS   Y  L+  +C+   +  A +L L  +R      D 
Sbjct: 263 VRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMAL-LDEMRAKGCEPDI 321

Query: 603 SMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
              +  I     +G+V+ A+  L  +           YT  L  LC   + KE   + + 
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           +          +   ++  LC++G +D A++V  +  ++G +      + +L  L    D
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLC---D 438

Query: 721 NKKV-HAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
             +V  A  LL R+KS G   D   Y    ++L G  +T + E
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAY---TTVLKGLCSTEQWE 478



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 60/138 (43%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VIS L K    +     L  + S  +   +  +  L  G  +    ++A+    ++++
Sbjct: 673 NTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQD 732

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   YN VL    R +   LA+  +  MV   C+P+  T+ +L+  L+  G  + 
Sbjct: 733 TGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDE 792

Query: 187 AIKMLDEMTQRGILPNKF 204
           A ++L  +   G+L  K 
Sbjct: 793 AKRLLASLCSLGVLDKKL 810


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 259/506 (51%), Gaps = 21/506 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-K 125
           S++I        FD   + L  +R  N  ++   F V+   Y K    +KA++ F +M  
Sbjct: 81  SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV----KLNCLPNIVTFSLLINGLSKS 181
           EF C+  V  +N+VLN+   + L+   L  Y  +V     +N  PN ++F+L+I  L K 
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
              + AI++   M +R  LP+ +TY  ++ GLC+  R DEA  L  +M+  GCSP  V Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L++G CK   +     L+ +    G VP   +Y+ LI GL    + D+A +   +M  
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            K  P+ V YG +I GL +  +  DA++LLS M ERG   + + Y+ LI G    G  ++
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A SL  ++ ++   PN   +++L+ G+CR G  ++A+++ N+M  +GC P+   +++L+ 
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           G  K G  E+A  ++ +M+             G +R  +K     +++  C  G + +A 
Sbjct: 441 GFFKTGLCEEAVQVWKEMD-----------KTGCSR--NKFCYSVLIDGLCGVGRVKEAM 487

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL---QLKGLRPDSVTYGTLI 538
            +  ++   G  PD + Y+S+I G C +G+++ ALKL+ E+   +    +PD VTY  L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTP 564
           +GL        A  +   M   GC P
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDP 573



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 248/499 (49%), Gaps = 46/499 (9%)

Query: 57  RKRLRSFASN-SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           ++ ++SF S  + +I+  L   G + Y   ++   + N+S     F ++I    K+   +
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A+E F  M E  C PD Y Y  +++   +++    A+ +  EM    C P+ V +++LI
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL K G      K++D M  +G +PN+ TY  +I GLC   + D+A  L  +M  S C 
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V Y  L+NG  K RR  +A+ LL S E+ G+      YS LI GLF+  + +EA + 
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +RKM E+  +P++V+Y V++ GL   GK  +A ++L+ M   G +P+ Y Y++L+KGF  
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            GL ++A  +  E+ K     N   +++LI G+C  G V +A  +++KM   G  P    
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           ++++I GLC  G ++ A  L+++M   + P      SQ                      
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPK-----SQ---------------------- 537

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
                             PD++TYN L++G C   +I+ A+ L   +  +G  PD +T  
Sbjct: 538 ------------------PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579

Query: 536 TLINGLQRVDREEDAFRIF 554
           T +N L       D  R F
Sbjct: 580 TFLNTLSEKSNSCDKGRSF 598



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 197/398 (49%), Gaps = 3/398 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           LS   V   + K +        F    +RK L    +   ++  L K    D     LDE
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++S   S    ++ VLI G  K GD  +  +    M    C P+   YN +++    K  
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+++   MV   C+PN VT+  LINGL K  +   A+++L  M +RG   N+  Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +ISGL +  +A+EA  L+ KM + GC P+ V Y+ L++G C+  + +EA  +L      G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P   +YS L+ G F+    +EA   +++M +     +   Y V+I GL   G+VK+AM
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD---SLPNTHTFTILI 385
            + S M   GI PDT  Y+++IKG C +G +D A  L  E+  ++   S P+  T+ IL+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            G+C    +  A  L N M   GC P V   N  ++ L
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 209/465 (44%), Gaps = 55/465 (11%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T S +I   + SG  +   K+L  +     +  + ++ +V     + +  D+A  LF +M
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 230 KDS----------------------------------------GCSPDFVAYNALLNGFC 249
            D                                           SP+ +++N ++   C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           KLR VD A+ + R   +   +P   +Y  L+DGL + +R DEA     +M  E   P  V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y V+I GL + G +    KL+ +M  +G VP+   YN LI G C  G LD+A SL   +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                +PN  T+  LI G+ +     DA +L + ME+ G   +  +++ LI GL K G+ 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           E+A  L+ KM E G  P + +                 +V+  C  G  ++A +IL ++ 
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVV--------------YSVLVDGLCREGKPNEAKEILNRMI 424

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            SG LP+  TY+SL+ GF K G    A++++KE+   G   +   Y  LI+GL  V R +
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           +A  ++ +M   G  P    Y S++   C       A  L+ + L
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 25/411 (6%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C L  +D+A  +   + +R  LP+ +T+  L+ G+C+   +D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  GC PS  ++N LIDGLCK G+L +   L   M        FL+       V
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM--------FLK-----GCV 289

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +  T++   C  G + KA  +L ++  S  +P+ +TY +LING  K      A++L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              ++ +G   +   Y  LI+GL +  + E+A  ++ +M + GC P+  VY  L+   CR
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K + A  +  + +      +  +  S+ + F + G  E A+Q   EMD          
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFL 694
           Y++ + GLC  G+VKEA+ ++S ++    I   P  V    +I GLC  G +D A+ ++ 
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKML---TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526

Query: 695 YTL-KNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
             L +     +P V  Y  LL  L   KD  +  A  LL  M   G D D 
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISR--AVDLLNSMLDRGCDPDV 575



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLI G   VG  ++A+  + KM     +PD   Y++++           AL +Y+EM+
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529

Query: 161 ---KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
              +    P++VT+++L++GL        A+ +L+ M  RG  P+  T    ++ L + +
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
            + +  R FL+               L+    K +RV  A  ++         P+  +++
Sbjct: 590 NSCDKGRSFLE--------------ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWA 635

Query: 278 CLIDGLFRAKRYDEA 292
            ++  + + K+ + A
Sbjct: 636 MIVREICKPKKINAA 650


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 262/555 (47%), Gaps = 41/555 (7%)

Query: 45  QVGFR--FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           Q G R   F ++A    L      +AV+         D Y + L E    N+ + + V  
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVM---------DRYHRMLSEGVQPNLLIYNAV-- 221

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
             I+   K G+   A     K+ E +  PD + Y +++    RK     AL V+ +M K 
Sbjct: 222 --INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN VT+S LINGL  SG+   A  ++ EM   GILP   T T  I  LC +   ++A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +RLF+ MK+ GC P+   Y AL++G C    +  A+ L     +DG  P   +Y+ LI+ 
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L   +R   A+     M      P++V Y  MI+G    G  K AM ++++M +RG   +
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKL 400
              YN +IKG+CD G  +   +L++    RD    P+  ++T LICG C+   ++ A  L
Sbjct: 460 LVTYNTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 517

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLRLSQ 453
           FN+M   G  P+   + ALIDG CK  +L+ A  L   M+  G  P       L   L++
Sbjct: 518 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 577

Query: 454 GGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIIT 498
             N    +   + M+E+                C  G    A ++  ++ E G LP+++T
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 637

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+SLI    + G +  A  LF EL+  GL PD +TY  +I       + E AF   G+M 
Sbjct: 638 YSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMI 697

Query: 559 QNGCTPSPAVYKSLM 573
           + GC P+   Y  L+
Sbjct: 698 KAGCQPTLWTYGVLI 712



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 269/555 (48%), Gaps = 24/555 (4%)

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  LD ++Q G+    F Y+ ++  L ++         + +M   G  P+ + YNA++N 
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK   V +A  +++   +    P   +Y+ +I G  R    D A   + +M +E  EP+
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  +I GL ++G+V +A  L+ +M   GI+P  +     I   CD+G  + A  L V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++  +   PN +T+T LI G+C +G++  A  LF++M + G FP+   +NALI+ L +  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            ++ A ++   M   G +P +               +   M++ YC  G   KA  ++  
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNI--------------VTYNEMIKGYCILGDPKKAMLVMNN 450

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G+  +++TYN++I G+C  GN   AL++   ++  G +PD  +Y  LI G  ++ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E AF +F +M  +G  P+   Y +L+   C+  K   A SL L++++    R +  +++
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL-LEHMKRSGCRPN--VQT 567

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
               +     +N   G  E+   + +  + P    YT  + GLC++G    AL +F+ ++
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           E   +    +   LI  L + G ++ A ++F    ++G I  P    Y+     +    K
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI--PDEITYVKMIEAYIMSGK 685

Query: 723 KVHAYHLLCRMKSVG 737
             HA++ L RM   G
Sbjct: 686 VEHAFNFLGRMIKAG 700



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 247/531 (46%), Gaps = 51/531 (9%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           ++ Y+A+L    R  +    +  Y+ M+     PN++ ++ +IN L K G    A  ++ 
Sbjct: 180 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 239

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           ++ +  + P+ FTYT +I G C+ +  D A ++F +M   GC P+ V Y+ L+NG C   
Sbjct: 240 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 299

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           RV+EA  L+R     G +P   + +  I  L     Y++A+  +  M  +  EP+V  Y 
Sbjct: 300 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 359

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL----------------------- 349
            +I GL  +G +K A+ L   M   G+ P+T  YNAL                       
Sbjct: 360 ALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419

Query: 350 ------------IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                       IKG+C LG   +A  +   + +R    N  T+  +I G C +G    A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
            ++ + M   GC P    +  LI G CK  ++E A  LF +M + G  P           
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----------- 528

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              ++ +   +++ YC    +  A  +L  +  SG  P++ TYN LI+G  K  N +GA 
Sbjct: 529 ---NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +L K +  +G+ P+ VTY  +I+GL +      A  +F +M + GC P+   Y SL+   
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQGLLEM 626
            +  K   A +L+ +  R     D+ + +K IE ++  G+VE+A   L  M
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 231/522 (44%), Gaps = 51/522 (9%)

Query: 115 EKALESFGKMKEFDCQPDVY-----------------------------------IYNAV 139
           E A   F  MK   C+P+VY                                    YNA+
Sbjct: 337 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNAL 396

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +NI    +    A  V   M +  C PNIVT++ +I G    G  + A+ +++ M QRG 
Sbjct: 397 INILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 456

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             N  TY  +I G C       A R+   M+D GC PD  +Y  L+ GFCK+ +++ A  
Sbjct: 457 SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFG 516

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L      DG  P   +Y+ LIDG  + ++ D A +    M      P+V  Y V+I GL+
Sbjct: 517 LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 576

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +      A +L   M E GI P+   Y A+I G C  G    A  +  ++ ++  LPN  
Sbjct: 577 KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYK 438
           T++ LI  + + G V++A+ LF ++E+ G  P    +  +I+    +G++E A N L   
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 439 MEIGKNPTLF-----LRLSQGGNRVHDK--ASLQTMVEQYCTAGLI---HKAYKIL-MQL 487
           ++ G  PTL+     ++  +    + D+  A+L  +V   C+ G       A  ++  +L
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN-CSFGYQTTDQDAVSVMSAKL 755

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           AE      +   N+L++     G    A +L   +  +GL PD   Y +L+  L RV   
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 815

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSC---RRRKFSLAF 586
           + A  +F  M   GC      YK L+   C   RR++  + F
Sbjct: 816 DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 203/488 (41%), Gaps = 60/488 (12%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I GY  +GD +KA+     M +     ++  YN ++           AL +   M    
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+  +++ LI G  K  K E A  + +EM   G+ PN+ TYT +I G C+  + D A 
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   MK SGC P+   YN L++G  K      A  L +   ++G  P + +Y+ +IDGL
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 610

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +      A   + KM E+   P+++ Y  +IR L + GKV++A  L +++   G++PD 
Sbjct: 611 CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  +I+ +   G ++                  H F  L                  +
Sbjct: 671 ITYVKMIEAYIMSGKVE------------------HAFNFL-----------------GR 695

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA- 462
           M KAGC P++  +  LI GL       K   L     +   P +    S G       A 
Sbjct: 696 MIKAGCQPTLWTYGVLIKGL-------KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAV 748

Query: 463 --------------SLQ---TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         S+Q    +V    TAG   +A ++L  +   G  PD   YNSL+  
Sbjct: 749 SVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCS 808

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             +V N++ A+ +FK +  +G       Y  LI  L ++ R ++A   F  M      P 
Sbjct: 809 LLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPD 868

Query: 566 PAVYKSLM 573
             V   L+
Sbjct: 869 DVVQAVLI 876



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 202/482 (41%), Gaps = 26/482 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY   G+   AL     M++  C+PD + Y  ++    +      A  ++ EM
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN VT++ LI+G  K  K + A  +L+ M + G  PN  TY ++I GL + N  
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L   M + G  P+ V Y A+++G CK      AL +     + G +P L +YS L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L +  + +EA   + ++    + PD + Y  MI     +GKV+ A   L  M + G 
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P  + Y  LIKG  +  LL   R   +     D +PN        C         DA  
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALP----DVVPN--------CSFGYQTTDQDAVS 749

Query: 400 LFN-KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           + + K+ +     SV + NAL+  L  AG   +AN L   M           +SQG    
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM-----------ISQG--LC 796

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D+ +  +++        +  A  +   ++  G    +  Y  LI   C++     A   
Sbjct: 797 PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 856

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+ + ++   PD V    LI+GL R   ++        M      PS  +Y  L   + +
Sbjct: 857 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916

Query: 579 RR 580
           +R
Sbjct: 917 KR 918



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 10/250 (4%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +    L  L++SG    +  Y++L+    ++G     +  +  +  +G++P+ + Y  +I
Sbjct: 163 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 222

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           N L +     DA  I  ++ ++  +P    Y S++   CR+     A  ++ Q  ++   
Sbjct: 223 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 282

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +  +  + I      G V  A   + EM            T  +I LC  G  ++A  +
Sbjct: 283 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 342

Query: 658 FSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           F   V+ K     P+      LI GLC  G L +A+ +F    ++G        N L+  
Sbjct: 343 F---VDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 715 LLFSKDNKKV 724
           L+   +N+++
Sbjct: 400 LV---ENRRI 406


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 177/675 (26%), Positives = 321/675 (47%), Gaps = 23/675 (3%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQLF 149
           S  V+  +  + +LI  + ++G  E    +FG + +   + +V + + +L  +   K++ 
Sbjct: 83  SSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVD 142

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
                +   M +  C P++V ++ +ING  + G+ E A  +  EM  +GI PN  TYT V
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTV 202

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I GLC+    D A  +F +M D G  PD   YN L++G+    +  E + +L      G 
Sbjct: 203 IDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGL 262

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +Y+ L+D L +  R  EA  ++  MF + I+PDV +Y +++ G +  G + +   
Sbjct: 263 EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHS 322

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  M   G+ P+   +N +   +    ++++A  +  ++ ++   P+  +F  LI  +C
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G VDDA   FN+M   G  P++ +F++L+ GLC  G+ EKA  LF+++          
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV---------- 432

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L QG     D     T++   C  G + +A +++  +   G  P++I+YN+L+ G C  
Sbjct: 433 -LDQG--ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLT 489

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I+ A KL   +   GL+P+  TY  L+ G  +  R +DA+ +F +M   G TP  A Y
Sbjct: 490 GRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATY 549

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDF 628
            +++    +  +FS A  L+L  +   +  D  +   I   L K   V+ A +    +  
Sbjct: 550 NTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCS 609

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI-HGLCKRGYLD 687
           K        + I +  L + G+ ++A+++F+  +    +V      +LI   L + G L 
Sbjct: 610 KDPQLDSVTFNIMIGALLKGGRKEDAMDLFAT-ISAYGLVPDVVTYRLIAENLIEEGSLG 668

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
               +F    K+G      + N L+R LL   D  +   Y  L ++    + L+A     
Sbjct: 669 EFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVY--LYKLDEKNFSLEA----S 722

Query: 748 TKSLLPGPWNTREME 762
           T S+L   ++  E +
Sbjct: 723 TTSMLISLYSRGEYQ 737



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 228/519 (43%), Gaps = 13/519 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K    D       ++    V   +  +  LI GY   G  ++ ++   +M  
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMST 259

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   Y  +L+   +      A   +  M +    P++  +++L++G +  G    
Sbjct: 260 HGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE 319

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
               LD M   G+ PN+  + I+     +    +EA  +F KM+  G SPD V++ AL++
Sbjct: 320 MHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALID 379

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CKL RVD+A+        +G  P +  +S L+ GL    ++++A   + ++ ++ I  
Sbjct: 380 ALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICV 439

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V +  ++  L   G+V +A +L+  M   G+ P+   YN L+ G C  G +D+A  L 
Sbjct: 440 DAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      PN  T+TIL+ G C+   VDDA  LF +M   G  P V  +N ++ GL + 
Sbjct: 500 DVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQT 559

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G   +AN L+  M   +                D  +   ++   C    + +A+K+  +
Sbjct: 560 GRFSEANELYLNMINSRTKC-------------DIYTYNIILNGLCKNNFVDEAFKMFRR 606

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L       D +T+N +I    K G    A+ LF  +   GL PD VTY  +   L     
Sbjct: 607 LCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGS 666

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
             +   +F  M ++G  P+  +  +L+     R   S A
Sbjct: 667 LGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 207/452 (45%), Gaps = 15/452 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +L+ GY   G   +       M      P+  I+N +     +K +   A+ ++ +M
Sbjct: 303 IYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++V+F  LI+ L K G+ + A+   ++M   G+ PN F ++ ++ GLC + + 
Sbjct: 363 RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKW 422

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  LF ++ D G   D V +N L+   C   RV EA  L+    + G  P + SY+ L
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTL 482

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G     R DEA      M    ++P+   Y +++RG  +A +V DA  L  +M  +G+
Sbjct: 483 VAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGV 542

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN ++ G    G   +A  L + +    +  + +T+ I++ G+C+N  VD+A K
Sbjct: 543 TPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFK 602

Query: 400 LFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +F ++  K     SV  FN +I  L K G  E A              LF  +S  G  V
Sbjct: 603 MFRRLCSKDPQLDSV-TFNIMIGALLKGGRKEDA------------MDLFATISAYG-LV 648

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  + + + E     G + +   +   + +SG  P+    N+L+      G+I+ A   
Sbjct: 649 PDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVY 708

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
             +L  K    ++ T   LI+   R + +  A
Sbjct: 709 LYKLDEKNFSLEASTTSMLISLYSRGEYQPHA 740



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 155/380 (40%), Gaps = 71/380 (18%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG---ELEKANLLFYKM------EIGKN 444
           +D+A KLF+++       SV  FN L+  + +AG     E+   LF +M      ++  N
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 445 PTLFL----------RLSQG----------GNRVHDKASLQTMVEQYCTAGLIHKAYKI- 483
              +           RL  G          G RV +   +  +++  C A  + +A  I 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRV-NVIVISQLLKGLCDAKRVDEATDIL 148

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L++++E G  PD++ YN++INGF + G +  A  LF E+  +G+ P+ VTY T+I+GL +
Sbjct: 149 LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCK 208

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               + A  +F QM   G  P    Y  L                               
Sbjct: 209 AQVVDRAKGVFQQMIDRGVKPDNGTYNCL------------------------------- 237

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
              I  +L  G+ +  +Q L EM     +     Y + L  LC++G+ +EA   F  +  
Sbjct: 238 ---IHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMF- 293

Query: 664 CKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            +  + P   +   L+HG   +G L          + NG     R+ N +  +  ++K  
Sbjct: 294 -RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCA--YAKKA 350

Query: 722 KKVHAYHLLCRMKSVGYDLD 741
               A H+  +M+  G   D
Sbjct: 351 MIEEAMHIFNKMRQQGLSPD 370



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 97/236 (41%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   + LD + S  +      + +L+ GY K    + A   F +M      P V  YN +
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           L+  F+   F  A  +Y  M+      +I T+++++NGL K+   + A KM   +  +  
Sbjct: 553 LHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDP 612

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             +  T+ I+I  L +  R ++A  LF  +   G  PD V Y  +     +   + E   
Sbjct: 613 QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG 672

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           L  + EK G  P     + L+  L        A  +  K+ E+    +     ++I
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 248/497 (49%), Gaps = 13/497 (2%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LRS    V  +    L+ G  K+   E A E   ++     + +VY  N ++N   +   
Sbjct: 74  LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK 133

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F    +   EM       ++VT++ LI    + G  E A ++++ M  +G+ P+ FTY  
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I+GLC+  R   A  + ++M + G SPD   YN LL   C+     EA  +     + G
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            VP L S+S LI    R +  D+A  ++R M +  + PD V+Y V++ G    G + +A+
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEAL 313

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M E+G V D   YN ++ G C   +L  A  L  E+ +R +LP+ +TFT LI G 
Sbjct: 314 KIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGH 373

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C++G +  A  LF  M +    P +  +N LIDG CK GE+EKA+ L+  M   K   +F
Sbjct: 374 CQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK---IF 430

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                      +  +   ++  YC+ G + +A+++   + E G  P ++T N++I G+C+
Sbjct: 431 ----------PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCR 480

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G+ + A +    +  KG+ PD ++Y TLING  R D  + AF    +M + G  P    
Sbjct: 481 SGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540

Query: 569 YKSLMTWSCRRRKFSLA 585
           Y  +M   CR+ +   A
Sbjct: 541 YNVVMNGFCRQGRMQEA 557



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 252/517 (48%), Gaps = 18/517 (3%)

Query: 53  WAAKRKRLRS-----FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           W   R+ +RS       + + +++ L K   FD     L E+    +      +  LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           Y + G  E+A E    M +   +P ++ YNA++N   +K  +  A  +  EM+ +   P+
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             T++ L+    +      A ++  EM ++G++P+  +++ +I+   +    D+A   F 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            MK  G  PD V Y  L++G+C+   + EAL +     + G V  + +Y+ +++GL + K
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
              +A   + +M E    PD   +  +I G  + G +  A+ L   M +R I PD   YN
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI GFC +G +++A  L   +  R   PN  T+ ILI   C  G V +A +L++ M + 
Sbjct: 403 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 462

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P++   N +I G C++G+  KA+    +M           +++G     D  S  T+
Sbjct: 463 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM-----------IAKG--VAPDHISYNTL 509

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +     + KA+  + ++ + G LPDIITYN ++NGFC+ G +  A  + +++  KG+
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            PD  TY  LING    D   +AFR   +M Q G  P
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 216/435 (49%), Gaps = 15/435 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +A+I+ L K   +      L E+ +  +S  +  +  L+    +  +  +A E F
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           G+M      PD+  +++++ +  R +    AL  + +M K   +P+ V +++L++G  ++
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A+K+ DEM ++G + +   Y  +++GLC+     +A +LF +M + G  PDF  +
Sbjct: 307 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 366

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             L++G C+   + +AL+L  +  +    P + +Y+ LIDG  +    ++A   +  M  
Sbjct: 367 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            KI P+ + YG++I      G V +A +L   M E+GI P     N +IKG+C  G   +
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 486

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +  +   P+  ++  LI G  R   +D A    NKMEK G  P +  +N +++
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMN 546

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G C+ G +++A L+  KM E G NP              D+++   ++  + T   +++A
Sbjct: 547 GFCRQGRMQEAELVLRKMIEKGINP--------------DRSTYTALINGHVTQDNLNEA 592

Query: 481 YKILMQLAESGNLPD 495
           ++   ++ + G  PD
Sbjct: 593 FRFHDEMLQRGFAPD 607



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 185/425 (43%), Gaps = 52/425 (12%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC----------DLGLLD--Q 361
           M+     + ++ DA  L+  M  R  V       AL+   C          DL +    Q
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 362 ARSLQ--VEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           AR L+   E ++    +  L + +    L+ G+ +   V+ A ++  ++ ++G   +V  
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTA 474
            N +++ LCK G+ +       +ME              GN ++ D  +  T++  YC  
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEME--------------GNGIYADMVTYNTLIGAYCRE 166

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           GL+ +A++I+  +A+ G  P + TYN++ING CK G    A  +  E+   GL PD+ TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TL+    R D   +A  IFG+M + G  P    + SL+    R R    A    L Y R
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQA----LVYFR 282

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND--------FQLAPYTIWLIGLC 646
           D+          I   L  G   N    +LE   K+ D          +  Y   L GLC
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNG--NMLEA-LKIRDEMLEQGCVLDVIAYNTILNGLC 339

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF-LYTLKNGFILRP 705
           ++  + +A  +F  +VE  A+    +   LIHG C+ G +  A+ +F   T +N   ++P
Sbjct: 340 KEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN---IKP 396

Query: 706 RVCNY 710
            +  Y
Sbjct: 397 DIVAY 401



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G+ KVG+ EKA E +  M      P+   Y  ++N          A  ++  M+
Sbjct: 401 YNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMI 460

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    P +VT + +I G  +SG +  A + L  M  +G+ P+  +Y  +I+G  + +  D
Sbjct: 461 EKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMD 520

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+    KM+  G  PD + YN ++NGFC+  R+ EA  +LR   + G  P   +Y+ LI
Sbjct: 521 KAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           +G       +EA+ ++ +M +    PD V 
Sbjct: 581 NGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 151/376 (40%), Gaps = 67/376 (17%)

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMC----RNGMVDD--------AQKL------ 400
           L  A++L + + +R  +        L+  MC     N +V D        A+KL      
Sbjct: 11  LSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEA 70

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  +   G   S+   N+L+ GL K   +E A       E+ +       + + G  + +
Sbjct: 71  FRILRSKGYLVSINACNSLLGGLVKIDWVELA------WEVHR------EVVRSGIEL-N 117

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +L  MV   C  G        L ++  +G   D++TYN+LI  +C+ G +  A ++  
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +  KGL+P   TY  +INGL +  R   A  I  +M   G +P    Y +L+  SCRR 
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
            FS A  ++ + LR     D  S  S I  F +   ++ A+    +M      F L P  
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM----KKFGLVPDN 293

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           +                I++VL               +HG C+ G +  A+ +    L+ 
Sbjct: 294 V----------------IYTVL---------------MHGYCRNGNMLEALKIRDEMLEQ 322

Query: 700 GFILRPRVCNYLLRSL 715
           G +L     N +L  L
Sbjct: 323 GCVLDVIAYNTILNGL 338


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 263/508 (51%), Gaps = 29/508 (5%)

Query: 79  FDLYWQTLDELRSGNV-------SVVSDV--FFVLISGYYKVGDCEKALESFGKMKE-FD 128
            D++ +T     +GN+       + + DV  + VLI+GY    + E+A     +M+E + 
Sbjct: 66  LDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYG 125

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-CLPNIVTFSLLINGLSKSGKTEVA 187
             P +  +N VL+    K   +LA   ++E    N C  +I T++ +++ L+K+ K + A
Sbjct: 126 VAPSLKTHNLVLH-GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + +++++T  G  P   TY  +++GLC++ R +EA  L  K+ D+GC+PD V Y +L++G
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             K +R  EA  L +     G V     Y+ LI GL +A +  +A + Y+ M  +   PD
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           VV    MI GL +AG++  A+++   M  RG+ P+   Y+ALI G C    +D A  +  
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ K    P+T T+ ILI G+C++G V+ A+  F++M +AGC P V  +N L+ G CKAG
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 428 ELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             + A  +F  M     +P +               +  T++   C    + KA      
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVV--------------TYGTLISGLCKRRQLTKASLYFQH 470

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + E G  PD   Y+SL++G CK G + G   LF E++  G+  +S T   LI  L + +R
Sbjct: 471 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANR 529

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            ++A  +F  + + G  P P  Y S+++
Sbjct: 530 VDEAVSLFNAIRKEG-MPHPYAYNSIIS 556



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 247/496 (49%), Gaps = 14/496 (2%)

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F  Q  V+  NA+L++  R +    A  +    +    LP++ T+++LI G   + + E 
Sbjct: 53  FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEE 112

Query: 187 AIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           A  ++ EM +  G+ P+  T+ +V+ GLC+  +   A   F     +GC+ D   Y A++
Sbjct: 113 AFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIV 172

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +   K +++ +A+AL+     +G  P + +Y+ L++GL +  R +EA    RK+ +    
Sbjct: 173 DWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVV Y  +I GL +  +  +A KL  +M  RG+V DT CY ALI+G    G + QA S+
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +  +  +P+  T + +I G+C+ G +  A ++F  ME  G  P+  +++ALI GLCK
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           A +++ A  +  +M             +      D  +   +++  C +G +  A     
Sbjct: 353 ARKMDCALEMLAQM-------------KKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ E+G  PD+ TYN L++GFCK GN + A  +F ++      P+ VTYGTLI+GL +  
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           +   A   F  M + GC P   VY SL+   C+  K      L+ +  R          +
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR 519

Query: 606 SIEEFLQKGEVENAIQ 621
            I    +   V+ A+ 
Sbjct: 520 LIFHLCKANRVDEAVS 535



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 191/370 (51%), Gaps = 1/370 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++  L K          ++++ +   +     +  L++G  K+G  E+A++   K+ +
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 228

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV  Y ++++   +++    A  ++ EM     + + V ++ LI GL ++GK   
Sbjct: 229 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQ 288

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +   MT +G +P+  T + +I GLC+  R   A R+F  M+  G +P+ V Y+AL++
Sbjct: 289 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK R++D AL +L   +K    P   +Y+ LIDGL ++   + A A++ +M E   +P
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y +++ G  +AG    A  +  DM      P+   Y  LI G C    L +A    
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYF 468

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + +R   P++  ++ L+ G+C++G ++    LF++ME++G   S      LI  LCKA
Sbjct: 469 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANS-QTRTRLIFHLCKA 527

Query: 427 GELEKANLLF 436
             +++A  LF
Sbjct: 528 NRVDEAVSLF 537



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 199/461 (43%), Gaps = 56/461 (12%)

Query: 239 VAYNALLNGFCKLRRVDEALALLR--SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           ++ +A++  F  L+  D A  L +  S  + GF   + + + L+D   R KR+ EA    
Sbjct: 23  ISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLL 82

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIKGFCD 355
           +        PDV  + V+I G   A + ++A  ++ +M E  G+ P    +N ++ G C 
Sbjct: 83  KNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCK 142

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G +  A              + HT+T ++  + +N  + DA  L  K+   GC P++  
Sbjct: 143 SGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIAT 202

Query: 416 FNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +NAL++GLCK G LE+A +LL   ++ G  P +    S       +K S +         
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE--------- 253

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                AYK+  ++A  G + D + Y +LI G  + G I  A  ++K +  +G  PD VT 
Sbjct: 254 -----AYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            T+I+GL +  R   A RIF  M   G  P+  VY +L+   C+ RK   A  +  Q  +
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                D  +                                  Y I + GLC+ G V+ A
Sbjct: 369 AFCTPDTIT----------------------------------YNILIDGLCKSGDVEAA 394

Query: 655 LNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              F  ++E  CK  V   +   L+ G CK G  D A  VF
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNI--LVSGFCKAGNTDAACGVF 433



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 166/394 (42%), Gaps = 54/394 (13%)

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G     +  NAL+  F       +A +L         LP+  T+ +LI G C     ++A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 398 QKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
             +  +ME+  G  PS+   N ++ GLCK+G++  A +  ++       T+         
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAA-MDHFETTTTNGCTI--------- 163

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D  +   +V+       I  A  ++ ++  +G  P I TYN+L+NG CK+G +  A+
Sbjct: 164 ---DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 220

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L +++   G  PD VTY +LI+GL +  R  +A+++F +M   G       Y +L    
Sbjct: 221 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTAL---- 276

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
                                         I   LQ G++  A      M  +     + 
Sbjct: 277 ------------------------------IRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFL 694
             +  + GLC+ G++  A+ IF  + E + +  P   V   LIHGLCK   +D A+++ L
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSM-EARGLA-PNEVVYSALIHGLCKARKMDCALEM-L 363

Query: 695 YTLKNGFILRPRVC-NYLLRSLLFSKDNKKVHAY 727
             +K  F     +  N L+  L  S D +   A+
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 397


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 90  RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           RSG      DVF    L++GY + G  + A      M      PD Y Y  ++     + 
Sbjct: 137 RSG---TAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRG 190

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL++  +M+   C P++VT+++L+  + KS     A+++LDEM  +G  PN  TY 
Sbjct: 191 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 250

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I+G+C+  R D+A     ++   G  PD V+Y  +L G C  +R ++   L     + 
Sbjct: 251 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             +P   ++  L+    R    + A     +M       +  L  ++I  + + G+V DA
Sbjct: 311 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            + L++M   G  PDT  Y  ++KG C     + A+ L  E+ +++  PN  TF   IC 
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+ G+++ A  L  +M + GC  ++  +NAL++G C  G ++ A  LFY M    N   
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 490

Query: 448 FLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLA 488
           +  L  G     R+   A L                  +V  +C  GL+ +A +++ Q+ 
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G  P++ITYN+L++G  K  N   AL+L   L   G+ PD VTY ++I  L R DR E
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 610

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +A ++F  +   G  P   +Y  ++   C+R
Sbjct: 611 EAIKMFHIVQDLGMRPKAVIYNKILLALCKR 641



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 276/578 (47%), Gaps = 69/578 (11%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L    + G   + F Y  +++G C+  + D A RL
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M     +PD   Y  ++ G C   RV EAL+LL      G  P + +Y+ L++ + +
Sbjct: 167 IASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           +  + +A     +M  +   P++V Y V+I G+   G+V DA + L+ +   G  PDT  
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  ++KG C     +    L  E+ +++ +PN  TF +L+   CR GMV+ A ++  +M 
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP-----TLFLRLSQGGNRVH 459
             GC  +  + N +I+ +CK G ++ A      M   G +P     T  L+      R  
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403

Query: 460 D-KASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D K  L+ MV +                C  GLI +A  ++ Q++E G   +I+TYN+L+
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC  G ++ AL+LF  +  K   P+++TY TL+ GL   +R + A  +  +M Q  C 
Sbjct: 464 NGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 520

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI--- 620
           P+   +  L+++ C++                  G  DE+++ +E+ ++ G   N I   
Sbjct: 521 PNVVTFNVLVSFFCQK------------------GLMDEAIELVEQMMEHGCTPNLITYN 562

Query: 621 ------------QGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVEC 664
                       +  LE+   L    ++P    Y+  +  L ++ +V+EA+ +F ++ + 
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 622

Query: 665 KAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNG 700
              + P + +  K++  LCKR   D A+D F Y + NG
Sbjct: 623 G--MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 658



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 235/485 (48%), Gaps = 18/485 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + ++  + K  GF    + LDE+R+   +     + V+I+G  + G  + A E  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++  +  QPD   Y  VL      + +     ++ EM++ NC+PN VTF +L+    + 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E AI++L++M+  G   N     IVI+ +C+  R D+A++    M   GCSPD ++Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C+  R ++A  LL+   +    P   +++  I  L +    ++A     +M E
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              E ++V Y  ++ G    G+V  A++L   M  +   P+T  Y  L+ G C+   LD 
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 506

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ ++D  PN  TF +L+   C+ G++D+A +L  +M + GC P++  +N L+D
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 566

Query: 422 GLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G+ K    E+A  LL   +  G +P              D  +  +++        + +A
Sbjct: 567 GITKDCNSEEALELLHGLVSNGVSP--------------DIVTYSSIIGVLSREDRVEEA 612

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   + + G  P  + YN ++   CK  N +GA+  F  +   G  P+ +TY TLI G
Sbjct: 613 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 672

Query: 541 LQRVD 545
           L   D
Sbjct: 673 LANED 677



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 162/340 (47%), Gaps = 3/340 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           VI+ + K    D  +Q L+ + S   S  +  +  ++ G  +    E A E   +M   +
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+   +N  + I  +K L   A  +  +M +  C  NIVT++ L+NG    G+ + A+
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++   M  +   PN  TYT +++GLC   R D A  L  +M    C+P+ V +N L++ F
Sbjct: 477 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+   +DEA+ L+    + G  P L +Y+ L+DG+ +    +EA      +    + PD+
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I  LS   +V++A+K+   +++ G+ P    YN ++   C     D A      
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +     +PN  T+  LI G+     + + + L  ++   G
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 3/311 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A     +M
Sbjct: 388 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 447

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E  C+ ++  YNA++N    +     AL ++Y M    C PN +T++ L+ GL  + + 
Sbjct: 448 SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERL 504

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L EM Q+   PN  T+ +++S  CQ    DEA  L  +M + GC+P+ + YN L
Sbjct: 505 DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 564

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G  K    +EAL LL     +G  P + +YS +I  L R  R +EA   +  + +  +
Sbjct: 565 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 624

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P  V+Y  ++  L +      A+   + M   G +P+   Y  LI+G  +   L + R 
Sbjct: 625 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 684

Query: 365 LQVEIWKRDSL 375
           L  E+  R  L
Sbjct: 685 LLRELCSRGVL 695



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 24/326 (7%)

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           L+D+A S       R   P+ +  T LI  +CR G   DA ++    E++G    V  +N
Sbjct: 96  LVDRATS-------RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            L+ G C+ G+L+ A  L   M +                  D  +   ++   C  G +
Sbjct: 149 TLVAGYCRYGQLDAARRLIASMPVAP----------------DAYTYTPIIRGLCDRGRV 192

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A  +L  +   G  P ++TY  L+   CK      A+++  E++ KG  P+ VTY  +
Sbjct: 193 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ING+ R  R +DA     ++   G  P    Y +++   C  +++     L+ + +    
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312

Query: 598 GRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             ++ +   +  F  +G  VE AIQ L +M             I +  +C+ G+V +A  
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQ 372

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCK 682
             + +          S   ++ GLC+
Sbjct: 373 FLNNMGSYGCSPDTISYTTVLKGLCR 398



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/305 (20%), Positives = 114/305 (37%), Gaps = 45/305 (14%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A +++ +    G  PD+     LI   C+ G  + A ++ +  +  G   D   Y TL+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 539 NGLQRVDREEDAFRIFGQMP--------------------------------QNGCTPSP 566
            G  R  + + A R+   MP                                  GC PS 
Sbjct: 152 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLL 624
             Y  L+   C+   F  A  + L  +R      +    +  I    ++G V++A + L 
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEV-LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL- 269

Query: 625 EMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
               +L+ +   P    YT  L GLC   + ++   +F+ ++E   +    +   L+   
Sbjct: 270 ---NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDL 740
           C+ G ++ A+ V      +G      +CN ++ ++   K  +   A+  L  M S G   
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTI--CKQGRVDDAFQFLNNMGSYGCSP 384

Query: 741 DACLY 745
           D   Y
Sbjct: 385 DTISY 389


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 272/547 (49%), Gaps = 20/547 (3%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ-PDVYIYNAVLNIA 143
            L E+R   V+   D     I  + + G  ++AL++F +  +  C+ P V +YN +L+  
Sbjct: 20  ALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDAL 79

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            R+ +    + VY  M K    PN+ T++LLI  L ++ + + A KMLDEM+++G  P++
Sbjct: 80  LRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDE 139

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            ++  ++SG+C++ R +EA R FL    +   P   +YNA+++  C   R+ E  +++  
Sbjct: 140 VSHGTIVSGMCKLGRVEEA-RGFL----AETVPVQASYNAVVHALCGEFRMWEVFSVVNE 194

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G  P + +Y+ ++D   +A+    A A   +M      P+V+ +  +++G  E GK
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGK 254

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V DA+ +   M + G  P T  YN LI+G C +G L  A      + +   LPN  T++ 
Sbjct: 255 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 314

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G    G +D A  ++N+M+ +GC P+V ++  +ID LCK    ++A  L  KM +  
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              +  +  T++ + C  G + +A  +   +  +G  P+  TYN L+
Sbjct: 375 CPP-------------NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G  + GN   A  +  E+   G     VTY T+IN L ++   + A  + G+M   G  
Sbjct: 422 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 481

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQG 622
           P    + +++   C+  K S+A  L  Q       R+  +    I E   +G++ NA+  
Sbjct: 482 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVY 541

Query: 623 LLEMDFK 629
           LL+M ++
Sbjct: 542 LLKMLYE 548



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 230/572 (40%), Gaps = 100/572 (17%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC-S 235
           GL  +G  +     L EM  RG+   +      I    +   AD A + F +  D GC  
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    YN LL+            ALLR       VP                        
Sbjct: 67  PGVRVYNHLLD------------ALLRENMVGAVVPV----------------------- 91

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           Y  M +  ++P+V  Y ++IR L +  +V  A K+L +M  +G  PD   +  ++ G C 
Sbjct: 92  YDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCK 151

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG +++AR    E     ++P   ++  ++  +C    + +   + N+M + G  P+V  
Sbjct: 152 LGRVEEARGFLAE-----TVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVT 206

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +  ++D  CKA EL  A  +  +M  +G  P +               +   +V+ +   
Sbjct: 207 YTTIVDAFCKARELRMACAILARMVSMGCTPNVL--------------TFTALVKGFFED 252

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +H A  +   + + G  P  I+YN LI G C +G++ GAL  F  ++   L P++ TY
Sbjct: 253 GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTY 312

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TL++G       + A  I+ +M  +GC P+  VY +++   C++  F  A SL  + L 
Sbjct: 313 STLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLM 372

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI---WLIG-LCQDGQ 650
           D                                         P T+    LIG LC  G+
Sbjct: 373 D--------------------------------------NCPPNTVTFNTLIGRLCDCGR 394

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V  ALN+F  +          +  +L+HGL + G    A  + +  L NGF L     N 
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 454

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           ++  L   +   + HA  LL RM   G   DA
Sbjct: 455 VINCL--CQMCMRKHAMLLLGRMMVQGIQPDA 484



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 179/399 (44%), Gaps = 15/399 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M +   QP+V  Y  +++   + +   +A A+   MV + C PN++TF+ L+ G  + G
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+ M   M   G  P+  +Y ++I GLC I     A   F  MK +   P+   Y+
Sbjct: 254 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 313

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++GF     +D A+ +    +  G  P +  Y+ +ID L +   +D+A +   KM  +
Sbjct: 314 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 373

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+ V +  +I  L + G+V  A+ +   MR  G  P+   YN L+ G    G    A
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            ++ +E+       +  T+  +I  +C+  M   A  L  +M   G  P    FNA+I  
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            CK G++  A  L  +M     P              +  +   ++ + C  G +  A  
Sbjct: 494 YCKEGKVSIAACLLGQMNAVNCP-------------RNVVAYTILISELCNQGKLSNAMV 540

Query: 483 ILMQLAESGNLPDIITYNSLING-FCKVGNINGALKLFK 520
            L+++   G  P+  T+N L+   F  +G I G + LFK
Sbjct: 541 YLLKMLYEGICPNEATWNVLVRAIFTNIGTI-GPIHLFK 578



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  +  L+ G+   GD + A+  + +MK   C+P+V +Y  ++++  +K +F  A ++  
Sbjct: 309 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 368

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M+  NC PN VTF+ LI  L   G+   A+ +   M + G  PN  TY  ++ GL +  
Sbjct: 369 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 428

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              +A+ + ++M ++G     V YN ++N  C++     A+ LL      G  P   +++
Sbjct: 429 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 488

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +I    +  +   A     +M       +VV Y ++I  L   GK+ +AM  L  M   
Sbjct: 489 AIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE 548

Query: 338 GIVPDTYCYNALIKG-FCDLGLL 359
           GI P+   +N L++  F ++G +
Sbjct: 549 GICPNEATWNVLVRAIFTNIGTI 571



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 181/438 (41%), Gaps = 32/438 (7%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           I   + AG    A+K      + G   P    YN L+       ++     +   + K  
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN +T+ +LI  +C+N  VD A+K+ ++M + GC P       ++ G+CK G +E+A 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
               +                   V  +AS   +V   C    + + + ++ ++ + G  
Sbjct: 160 GFLAET------------------VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQ 201

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+++TY ++++ FCK   +  A  +   +   G  P+ +T+  L+ G     +  DA  +
Sbjct: 202 PNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSM 261

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
           +  M   G  PS   Y  L+   C       A   +    R+    +  +  + ++ F  
Sbjct: 262 WHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 321

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTP 670
            G+++ A+    EM        +  YT  +  LC+     +A ++   ++   C     P
Sbjct: 322 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNC-----P 376

Query: 671 PSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           P+ V    LI  LC  G +  A++VF    +NG     R  N LL   LF + N K  A+
Sbjct: 377 PNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHG-LFREGNHK-DAF 434

Query: 728 HLLCRMKSVGYDLDACLY 745
            ++  M + G++L    Y
Sbjct: 435 AMVIEMLNNGFELSLVTY 452



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I +L K   FD     +D++   N    +  F  LI      G   +AL  F  M+   
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+   YN +L+  FR+     A A+  EM+      ++VT++ +IN L +    + A+
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L  M  +GI P+ FT+  +I   C+  +   A  L  +M    C  + VAY  L++  
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           C   ++  A+  L     +G  P   +++ L+  +F
Sbjct: 530 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 166/644 (25%), Positives = 289/644 (44%), Gaps = 87/644 (13%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E  C PD   YN V+           AL +   M K    C P++V+F+ +I+G  K
Sbjct: 185 RMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 244

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  + +EM Q+G++P+  TY  ++  LC+    D+A  +  +M D G  PD V 
Sbjct: 245 QGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVT 304

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YNA+++G+       E+  + R     G +P   ++S  +  L +  R  +A   ++ M 
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +   PD+V Y +++ G +  G+  D   L   M ++GIV + +C N LI      G++D
Sbjct: 365 TKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMD 424

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  E+  +   PN  T++ LI   CR G + DA + F++M   G  P+  ++++LI
Sbjct: 425 EAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484

Query: 421 DGLCKAGELEKA---------------NLLFYK----------------------MEIGK 443
            G C  G+L KA               N++F+                       + IG 
Sbjct: 485 HGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGD 544

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            PT+               +  ++++ YC  G + KA+ +L  +   G  PD++T N+L+
Sbjct: 545 RPTI--------------VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G+CK G I+  L LF+E+  K ++P +VTY  +++GL R  R   A ++F +M  +G  
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
                YK L+   C                     R+D + ++I  F + G         
Sbjct: 651 VDIDTYKILLKGLC---------------------RNDLTDEAITLFHKLG--------- 680

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
             MD K   F +      +  L +  + +EA ++F+ +     +    +   +I  L K 
Sbjct: 681 -AMDCK---FDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKE 736

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           G ++ A  +F    K+G     R+ N ++R LL   D  K   Y
Sbjct: 737 GSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYY 780



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 238/485 (49%), Gaps = 18/485 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +I G++K G+  KA   F +M +    PDV  YN++++   + +    A  V  +MV
Sbjct: 235 FNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMV 294

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+ VT++ +I+G S SG  + + KM  +MT +G++P+  T++  +S LC+  R+ 
Sbjct: 295 DKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSK 354

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +F  M   G  PD V+Y+ LL+G+    R  +   L  S    G V      + LI
Sbjct: 355 DAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILI 414

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +    DEA   + +M  + + P+VV Y  +I      G++ DAM+  S M   GI 
Sbjct: 415 SAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGMVDDAQK 399
           P+T  Y++LI GFC  G L +A+    E+  +    PN   F+ +I  +C  G V DAQ 
Sbjct: 475 PNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD 534

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +FN +   G  P++  FN+LIDG C  G++EKA  +L   + +G  P             
Sbjct: 535 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP------------- 581

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T+V  YC +G I     +  ++      P  +TYN +++G  + G  + A K+
Sbjct: 582 -DVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WS 576
           F E+   G   D  TY  L+ GL R D  ++A  +F ++    C     +  +++   + 
Sbjct: 641 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYK 700

Query: 577 CRRRK 581
            RRR+
Sbjct: 701 VRRRE 705



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/589 (23%), Positives = 256/589 (43%), Gaps = 60/589 (10%)

Query: 151 LALAVYYEMVKLNCLPNIV-----TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           L LA++  + +    P +      T+ +L++   ++ + ++    +  + + G+      
Sbjct: 102 LVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQ 161

Query: 206 YTIVISGLCQINRADEAYRLFL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            T  +  LC   R DEA  + L +M +  C PD ++YN ++   C   R  EAL +++  
Sbjct: 162 ATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRM 221

Query: 265 EKD-------------------------------------GFVPRLGSYSCLIDGLFRAK 287
            K+                                     G VP +G+Y+ ++D L +A+
Sbjct: 222 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKAR 281

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             D+A    R+M ++ +EPD V Y  +I G S +G  K++ K+   M  +G++PDT  ++
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           + +   C  G    A  +   +  +  +P+  +++IL+ G    G   D   LF+ M   
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G   +    N LI    K G +++A L+F +M             QG     +  +  T+
Sbjct: 402 GIVSNCHCINILISAHAKRGMMDEAMLVFTEM-------------QGQGVRPNVVTYSTL 448

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +C  G +  A +   Q+   G  P+   Y+SLI+GFC  G++  A +   E+  KGL
Sbjct: 449 ISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508

Query: 528 -RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            RP+ V + ++I+ L    R  DA  +F  +   G  P+   + SL+   C   K   AF
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568

Query: 587 SLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
            + L  +  +    D    +  +  + + G++++ +    EM  K        Y I L G
Sbjct: 569 GV-LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           L + G+   A  +F  +++    V   +   L+ GLC+    D A+ +F
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF 676



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 223/500 (44%), Gaps = 14/500 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  L K    D     L ++    V      +  +I GY   G  +++ + F KM  
Sbjct: 271 NSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTS 330

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   +++ ++   +      A  ++  M     +P+IV++S+L++G +  G+   
Sbjct: 331 KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFAD 390

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +   M  +GI+ N     I+IS   +    DEA  +F +M+  G  P+ V Y+ L++
Sbjct: 391 MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLIS 450

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE- 305
            FC++ R+ +A+         G  P    Y  LI G        +A  +  +M  + +  
Sbjct: 451 AFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHR 510

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P++V +  +I  L   G+V DA  + + +   G  P    +N+LI G+C +G +++A  +
Sbjct: 511 PNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 570

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+  T   L+ G C++G +DD   LF +M      P+   +N ++DGL +
Sbjct: 571 LDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLR 630

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AG    A  +F++M               G  V D  + + +++  C   L  +A  +  
Sbjct: 631 AGRTSAAKKMFHEM------------IDSGTAV-DIDTYKILLKGLCRNDLTDEAITLFH 677

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +L       DI   N++IN   KV     A  LF  +   GL P+  TYG +I  L +  
Sbjct: 678 KLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEG 737

Query: 546 REEDAFRIFGQMPQNGCTPS 565
             E+A  +F  M ++GC PS
Sbjct: 738 SVEEADTMFSSMEKSGCAPS 757



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 36/374 (9%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LIS + K G  ++A+  F +M+    +P+V  Y+ +++   R      A+  + +M+ +
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADE 221
              PN   +  LI+G    G    A + + EM  +G+  PN   ++ +I  LC   R  +
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMD 531

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  +F  +   G  P  V +N+L++G+C + ++++A  +L +    G  P + + + L+ 
Sbjct: 532 AQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVS 591

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  ++ + D+    +R+M  +K++P  V Y +++ GL  AG+   A K+  +M + G   
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--------------------------- 374
           D   Y  L+KG C   L D+A +L  ++   D                            
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711

Query: 375 --------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
                   +PN  T+ ++I  + + G V++A  +F+ MEK+GC PS  + N +I  L + 
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771

Query: 427 GELEKANLLFYKME 440
           G++ KA     K++
Sbjct: 772 GDIVKAGYYMSKVD 785



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 159/375 (42%), Gaps = 54/375 (14%)

Query: 382 TILICGMCRNGMVDDA-QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           T L C +C     D+A   L ++M +  C P    +N +I  LC     ++A  +  +M 
Sbjct: 164 TFLKC-LCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMA 222

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                       +GG    D  S  T++  +   G + KA  +  ++ + G +PD+ TYN
Sbjct: 223 -----------KEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYN 271

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           S+++  CK   ++ A  + +++  KG+ PD VTY  +I+G       +++ ++F +M   
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSK 331

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           G  P    + S M+  C+                   GR  ++ +  +    KG + + +
Sbjct: 332 GLIPDTVTFSSFMSSLCKH------------------GRSKDAEEIFQYMTTKGHMPDIV 373

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHG 679
                            Y+I L G   +G+  +  N+F  + + K IV+   C+  LI  
Sbjct: 374 S----------------YSILLHGYATEGRFADMNNLFHSMAD-KGIVSNCHCINILISA 416

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
             KRG +D AM VF  T   G  +RP V  Y      F +  +   A     +M S+G +
Sbjct: 417 HAKRGMMDEAMLVF--TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIE 474

Query: 740 LDACLYPKTKSLLPG 754
            +  +Y    SL+ G
Sbjct: 475 PNTAVY---HSLIHG 486


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 258/514 (50%), Gaps = 38/514 (7%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M + G+ PN +TY I++  LC   R +EA  +   M+ +GC+P+ V YN L+  FC+   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 254 VDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           +D A  ++    ++G   P L +++ +++GL +A R + A   + +M  E + PDVV Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ G  + G + +++ + S+M +RG+VPD   + +LI   C  G L+QA +L  ++ +R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
               N  TFT LI G C+ G +DDA     +M K G  PSV  +NALI+G CK G ++ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             L  +ME                RV  D  +  T++  YC  G +  A+++  ++ + G
Sbjct: 241 RELIREME--------------AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            LPD ITY+SLI G C+   +N A +LF+ +   G++PD  TY TLI+G  +    E A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD---------- 601
            +  +M + G  P    Y  L+    +  +   A  L  +   +    D+          
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 406

Query: 602 --ESMKSI----EEFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                KS+    + F  KG   E +   Q +L+ ++KL+    + Y+I + G C+ G V+
Sbjct: 407 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG---SVYSILIHGHCRGGNVR 463

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
           +AL+    ++         S + L+ GL + G +
Sbjct: 464 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMV 497



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 254/515 (49%), Gaps = 35/515 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+VY YN ++     +     A+ V  +M    C PN VT++ L+    ++G+ + A ++
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 191 LDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +  M + G   PN  T+  +++GLC+  R + A ++F +M   G +PD V+YN LL+G+C
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K+  + E+LA+     + G VP + +++ LI    +A   ++A A   +M E  +  + V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            +  +I G  + G + DA+  + +MR+ GI P   CYNALI G+C LG +D AR L  E+
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +   P+  T++ +I G C+ G +D A +L  KM K G  P    +++LI GLC+   L
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             A  LF  M ++G  P              D+ +  T+++ +C  G + KA  +  ++ 
Sbjct: 308 NDACELFENMLQLGVQP--------------DEFTYTTLIDGHCKEGNVEKALSLHDEMI 353

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE- 547
             G LPD++TY+ LING  K      A +L  +L  +   PD++ Y  L+    + + + 
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413

Query: 548 --------------EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
                         ++A +++  M         +VY  L+   CR      A S   Q L
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473

Query: 594 RD-ISGRDDESMKSIEEFLQKG---EVENAIQGLL 624
           R   S     ++  +    ++G   E +NAIQ LL
Sbjct: 474 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 222/442 (50%), Gaps = 33/442 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +++G  K G  E A + F +M      PDV  YN +L+   +      +LAV+ EM
Sbjct: 83  TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   +P++VTF+ LI+   K+G  E A+ ++ +M +RG+  N+ T+T +I G C+    
Sbjct: 143 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A     +M+  G  P  V YNAL+NG+CKL R+D A  L+R  E     P + +YS +
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +    D A+   +KM ++ + PD + Y  +IRGL E  ++ DA +L  +M + G+
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y  LI G C  G +++A SL  E+ ++  LP+  T+++LI G+ ++    +A +
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L  K+      P    ++AL+   C   E +                             
Sbjct: 383 LLFKLYHEDPVPDNIKYDALML-CCSKAEFK----------------------------- 412

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              S+  +++ +C  GL+ +A K+   + +     D   Y+ LI+G C+ GN+  AL   
Sbjct: 413 ---SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469

Query: 520 KELQLKGLRPDSVTYGTLINGL 541
           K++   G  P+S +  +L+ GL
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGL 491



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 29/490 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+      G  E+A+   G M+   C P+   YN ++    R      A  V   M
Sbjct: 12  TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 71

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +  N  PN+VTF+ ++NGL K+G+ E A K+ DEM + G+ P+  +Y  ++SG C++  
Sbjct: 72  REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 131

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             E+  +F +M   G  PD V + +L++  CK   +++A+AL+    + G      +++ 
Sbjct: 132 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  +    D+A     +M +  I+P VV Y  +I G  + G++  A +L+ +M  + 
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y+ +I G+C +G LD A  L  ++ K+  LP+  T++ LI G+C    ++DA 
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +LF  M + G  P    +  LIDG CK G +EKA  L  +M           + +G   +
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM-----------IRKG--VL 358

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN---------------SLI 503
            D  +   ++     +    +A+++L +L     +PD I Y+               +L+
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G +  A K+++ +  +  + D   Y  LI+G  R      A     QM ++G +
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478

Query: 564 PSPAVYKSLM 573
           P+     SL+
Sbjct: 479 PNSTSTISLV 488



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 234/492 (47%), Gaps = 34/492 (6%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   G +P+   YN L+   C   R++EA+ ++      G  P   +Y+ L+    RA  
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 289 YDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            D A      M EE   +P++V +  M+ GL +AG+++ A K+  +M   G+ PD   YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            L+ G+C +G L ++ ++  E+ +R  +P+  TFT LI   C+ G ++ A  L  +M + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
           G   +   F ALIDG CK G L+ A L   +M + G  P++                   
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV--------------CYNA 226

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++  YC  G +  A +++ ++      PD++TY+++I+G+CKVGN++ A +L +++  KG
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           + PD++TY +LI GL    R  DA  +F  M Q G  P    Y +L+   C+      A 
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 587 SLWLQYLR-----DI------------SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
           SL  + +R     D+            S R  E+ + + +   +  V + I+    M   
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM-LC 405

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            +  +       L G C  G +KEA  ++  +++    +       LIHG C+ G +  A
Sbjct: 406 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 465

Query: 690 MDVFLYTLKNGF 701
           +      L++GF
Sbjct: 466 LSFHKQMLRSGF 477



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 186/355 (52%), Gaps = 17/355 (4%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +V DV  F  LI    K G+ E+A+    +M+E   + +   + A+++   +K     AL
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EM K    P++V ++ LING  K G+ ++A +++ EM  + + P+  TY+ +ISG 
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C++   D A++L  KM   G  PD + Y++L+ G C+ +R+++A  L  +  + G  P  
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LIDG  +    ++A + + +M  + + PDVV Y V+I GLS++ + K+A +LL  
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386

Query: 334 MRERGIVPDTYCYN---------------ALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           +     VPD   Y+               AL+KGFC  GL+ +A  +   +  R+   + 
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             ++ILI G CR G V  A     +M ++G  P+     +L+ GL + G + +A+
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 196/416 (47%), Gaps = 51/416 (12%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G+ P+ Y YN L++  C  G L++A  +  ++      PN  T+  L+   CR G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 394 VDDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
           +D A+++ + M E+    P++  FN++++GLCKAG +E A  +F +M   G  P      
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP------ 114

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  S  T++  YC  G +H++  +  ++ + G +PD++T+ SLI+  CK GN
Sbjct: 115 --------DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A+ L  +++ +GLR + VT+  LI+G  +    +DA     +M + G  PS   Y +
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 572 LMTWSCRRRKFSLAFSLW------------LQYLRDISG-----RDDESMKSIEEFLQKG 614
           L+   C+  +  LA  L             + Y   ISG       D + +  ++ L+KG
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            + +AI                 Y+  + GLC++ ++ +A  +F  +++        +  
Sbjct: 287 VLPDAIT----------------YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 330

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            LI G CK G ++ A+ +    ++ G +  P V  Y +     SK  +   A+ LL
Sbjct: 331 TLIDGHCKEGNVEKALSLHDEMIRKGVL--PDVVTYSVLINGLSKSARTKEAHRLL 384


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 180/666 (27%), Positives = 307/666 (46%), Gaps = 64/666 (9%)

Query: 45  QVGFRFFIWA-AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
           +     F WA A++    SF+    +I  L    GF +  + L +++   + V  +  F+
Sbjct: 85  ETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGI-VFRESLFI 143

Query: 104 LISGYY-KVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           LI  YY + G   +A      MK  + C+P    YN VL++                +V 
Sbjct: 144 LIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV----------------LVV 187

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
            NC                     VA  +  +M  +G+ PN +T+ +V+  LC +N  D 
Sbjct: 188 GNC-------------------PSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDN 228

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  L   M   GC P+ + Y  L++   K  RVDEAL LL      G  P + +++ +I 
Sbjct: 229 ACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIY 288

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  R  R  E      +M  +   P+ + YG ++ GL +  ++ +A  LLS +      P
Sbjct: 289 GFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----P 344

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           +   +N L+ GF   G L++A +   + +     +P+  TF+ L+ G+C+ G+   A +L
Sbjct: 345 NVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALEL 404

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N M+  GC P++  +  LIDG CK G+LE+A L+  +M           L++G +   +
Sbjct: 405 VNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM-----------LTKGFSL--N 451

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 ++   C  G IH+A  +  +++  G  PDI T+NSLI G C+V  +  AL L++
Sbjct: 452 TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR 511

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           ++ L+G+  +SVT+ TLI+   R    ++A ++   M   GC      Y  L+   C+  
Sbjct: 512 DMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571

Query: 581 KFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                  L+ + +R  ++         I  F   G+V NA++ + +M  +     +  Y 
Sbjct: 572 AVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYN 631

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYT 696
             + GLC+ G+++EALN+F  L   +A    P  +    LI  LC+ G  D A  +    
Sbjct: 632 SLINGLCKRGRIQEALNLFEKL---QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG 688

Query: 697 LKNGFI 702
           ++NGF+
Sbjct: 689 VENGFV 694



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 256/545 (46%), Gaps = 47/545 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           SF S + V+ +L+  N   +      ++ S  VS     F +++     V + + A    
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  IY  +++   ++     AL +  EM  + C P++ TF+ +I G  + 
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL---------------- 225
            +     K++D M  +G  PN  TY  ++ GLC+  R DEA  L                
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLV 353

Query: 226 ----------------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                           + KM ++G  PD   ++ L+NG CK      AL L+   +  G 
Sbjct: 354 NGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGC 413

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P L +Y+ LIDG  +  + +EA    R+M  +    + V Y  +I  L + GK+ +A+ 
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALD 473

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  +M  +G  PD + +N+LI G C +  ++ A +L  ++     + N+ TF  LI    
Sbjct: 474 MFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFL 533

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
           R G + +A KL N M   GC      +N LI  LCK G +EK   LF +M   G  P++ 
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                         +   ++  +CTAG +H A + +  +   G  PDI+TYNSLING CK
Sbjct: 594 --------------TCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G I  AL LF++LQ +G++PDS+TY TLI  L R    +DA  +  +  +NG  P+   
Sbjct: 640 RGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVT 699

Query: 569 YKSLM 573
           +  L+
Sbjct: 700 WNILV 704



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 198/386 (51%), Gaps = 16/386 (4%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALA-VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           P+V  +N ++N   R      A A VY +M+    +P++ TFS L+NGL K G    A++
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++++M  +G  PN  TYTI+I G C+  + +EA  +  +M   G S + V YNAL++  C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  ++ EAL +       G  P + +++ LI GL R    ++A A YR M  E +  + V
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            +  +I      G++++A+KL++DM  RG   D   YN LIK  C  G +++   L  E+
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            ++   P+  T  ILI G C  G V +A +    M   G  P +  +N+LI+GLCK G +
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 430 EKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++A  LF K++  G  P              D  +  T++   C  G    A  +L +  
Sbjct: 644 QEALNLFEKLQAEGIQP--------------DSITYNTLICWLCREGAFDDACFLLYRGV 689

Query: 489 ESGNLPDIITYNSLINGFCKVGNING 514
           E+G +P+ +T+N L+  F K  N  G
Sbjct: 690 ENGFVPNDVTWNILVYNFGKQSNSEG 715



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 36/372 (9%)

Query: 101 FFVLISGYYKVGDCEKALE-SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L++G+ + G   +A    + KM      PDV+ ++ ++N   +K LF  AL +  +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C PN+ T+++LI+G  K G+ E A  +L EM  +G   N   Y  +IS LC+  + 
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +F +M   GC PD   +N+L+ G C++  +++ALAL R    +G +    +++ L
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528

Query: 280 I-----------------DGLFRAKRYDE------------------AYAWYRKMFEEKI 304
           I                 D LFR    DE                      + +M  + +
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P ++   ++I G   AGKV +A++ + DM  RG  PD   YN+LI G C  G + +A +
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++      P++ T+  LIC +CR G  DDA  L  +  + G  P+   +N L+    
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFG 708

Query: 425 KAGELEKANLLF 436
           K    E   + +
Sbjct: 709 KQSNSEGQTITY 720



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/547 (23%), Positives = 227/547 (41%), Gaps = 86/547 (15%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            + LLI+ L  +   +V  ++L +M + GI+  +  + +++    +     +A RL L M
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165

Query: 230 KDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           K    C P F +YN +L+          A  +       G  P   ++  ++  L     
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A    R M +    P+ ++Y  +I  LS+  +V +A+KLL +M   G  PD   +N 
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I GFC L  + +   L   +  +   PN  T+  L+ G+C+   +D+AQ L +K+    
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG-- 343

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P+V  FN L++G  + G                      RL++    V+DK       
Sbjct: 344 --PNVVHFNTLVNGFVRNG----------------------RLNEATAFVYDK------- 372

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
                             +  +G +PD+ T+++L+NG CK G    AL+L  ++  KG +
Sbjct: 373 ------------------MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P+  TY  LI+G  +  + E+A  I  +M   G + +   Y +L++  C+          
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH--------- 465

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
                                    G++  A+    EM  K     +  +   + GLC+ 
Sbjct: 466 -------------------------GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++++AL ++  +V    I    +   LIH   +RG +  A+ +    L  G  L     
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560

Query: 709 NYLLRSL 715
           N L+++L
Sbjct: 561 NGLIKAL 567


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 177/665 (26%), Positives = 308/665 (46%), Gaps = 50/665 (7%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G  K  + + A     +M       D  +Y+  + +  ++     A A++  M+
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P    ++ LI G  +        ++L E+ +R I+ + +TY   + G+C     D
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            AY +  +M  SGC P+ V Y  L+  F +  R  +A+ +L+   + G  P    Y+ LI
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLI 497

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL +AK+ DEA ++  +M E   +PD   YG  I G  EAG+   A K + +M E G++
Sbjct: 498 IGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI 557

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+      LI  +C  G + +A S    + ++  L +  T+T+L+ G+ +NG V+DA+++
Sbjct: 558 PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEI 617

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F++M   G  P V  +  LIDG  K G ++KA+ +F +M + G    + +          
Sbjct: 618 FHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVII---------- 667

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  ++  +C +G I KA ++L +++  G  P+ +TY ++I+G+CK G++  A +LF
Sbjct: 668 ----YNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLF 723

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E++LKGL PDS  Y TL++G  R++  E A  IF +  + GC  S A + +L+ W  + 
Sbjct: 724 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKF 782

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
            K  L   +                           +   + G  +   K ND     Y 
Sbjct: 783 GKTELTTDM---------------------------INRLMDGSFDKFGKPND---VTYN 812

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           I +  LC++G ++ A  +F  + +   + T  +   L++G  K G       VF   +  
Sbjct: 813 IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAA 872

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT--KSLLPGPWN 757
           G  + P    Y +    F K+     A  LL +M +     D C    +  ++LL G   
Sbjct: 873 G--IEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAK 930

Query: 758 TREME 762
             EME
Sbjct: 931 VGEME 935



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 252/540 (46%), Gaps = 15/540 (2%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           + KN + G+   +   KR  + S  +    +  +      D  +  + E+ +        
Sbjct: 397 REKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVV 456

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI  + +      A+    +M+E    PD + YN+++    + +    A +   EM
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEM 516

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P+  T+   I+G  ++G+   A K + EM + G++PNK   T +I+  C+  + 
Sbjct: 517 VENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKV 576

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA   F  M + G   D   Y  L+NG  K  +V++A  +       G  P + SY  L
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTL 636

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  +     +A + + +M +  +  +V++Y +++ G   +G+++ A +LL +M  +G 
Sbjct: 637 IDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  +I G+C  G L +A  L  E+  +  +P++  +T L+ G CR   V+ A  
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 756

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F   EK GC  S   FNALI+ + K G+ E    +  ++  G     F +  +  +  +
Sbjct: 757 IFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGS----FDKFGKPNDVTY 811

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +      M++  C  G +  A ++   + ++  +P +ITY SL+NG+ K+G  +    +F
Sbjct: 812 N-----IMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVF 866

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----PQNGCTPSPAVYKSLMT 574
            E+   G+ PD++ Y  +IN   +      A  +  QM       +GC  S +  ++L++
Sbjct: 867 DEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS 926



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 143/558 (25%), Positives = 236/558 (42%), Gaps = 102/558 (18%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++ L E++  N+ +    +   + G    GD + A     +M    C+P+V IY  ++  
Sbjct: 405 YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKT 464

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +K  F  A+ V  EM +    P+   ++ LI GLSK+ K + A   L EM + G  P+
Sbjct: 465 FLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPD 524

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            FTY   ISG  +      A +   +M + G  P+ V    L+N +CK  +V EA +  R
Sbjct: 525 AFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFR 584

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE-- 320
           S  + G +    +Y+ L++GL +  + ++A   + +M  + I PDV  YG +I G S+  
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLG 644

Query: 321 ---------------------------------AGKVKDAMKLLSDMRERGIVPDTYCYN 347
                                            +G+++ A +LL +M  +G  P+   Y 
Sbjct: 645 NMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYC 704

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            +I G+C  G L +A  L  E+  +  +P++  +T L+ G CR   V+ A  +F   EK 
Sbjct: 705 TIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK- 763

Query: 408 GCFPSVGMFNALI---------------------------------------DGLCKAGE 428
           GC  S   FNALI                                       D LCK G 
Sbjct: 764 GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGN 823

Query: 429 LEKANLLFYKMEIGK-NPTL--FLRLSQGGNRVHDKASLQTMVEQYCTAG---------- 475
           LE A  LF+ M+     PT+  +  L  G +++  ++ + ++ ++   AG          
Sbjct: 824 LEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSV 883

Query: 476 ---------LIHKAYKILMQLAESGNLPD-----IITYNSLINGFCKVGNINGALKLFKE 521
                    +  KA  +L Q+     + D     I T  +L++GF KVG +  A K+ + 
Sbjct: 884 IINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVEN 943

Query: 522 LQLKGLRPDSVTYGTLIN 539
           +      PDS T   LIN
Sbjct: 944 MVRLKYIPDSSTVIELIN 961



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 212/466 (45%), Gaps = 39/466 (8%)

Query: 84  QTLDELRSGNVSVVSDVF-------FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + +DE RS  + +V + F          ISGY + G+   A +   +M E    P+  + 
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             ++N   +K   + A + +  MV+   L +  T+++L+NGL K+GK   A ++  EM  
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +GI P+ F+Y  +I G  ++    +A  +F +M  +G + + + YN LL GFC+   +++
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  LL      GF P   +Y  +IDG  ++    EA+  + +M  + + PD  +Y  ++ 
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG----LLDQARSLQVEIWKR 372
           G      V+ A+ +  +  E+G    +  +NALI      G      D    L    + +
Sbjct: 744 GCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDK 802

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE---- 428
              PN  T+ I+I  +C+ G ++ A++LF+ M+KA   P+V  + +L++G  K G     
Sbjct: 803 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEM 862

Query: 429 -----------LEKANLL-------FYKMEIGKNPTLFLRLSQGGNRVHD--KASLQT-- 466
                      +E  N++       F K  +     + L      N V D  K S+ T  
Sbjct: 863 FSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCR 922

Query: 467 -MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            ++  +   G +  A K++  +     +PD  T   LIN  C   N
Sbjct: 923 ALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSN 968



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 239/552 (43%), Gaps = 54/552 (9%)

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKD---GFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           +  L++G+ +   +DEA+ +  S  KD     VP L   + L+D L +  R D  +  Y+
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSS-TKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYK 213

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVK---------------------DAMKLLSDMRE 336
            M E  +  DV  Y ++I      G V+                     +A++L   M  
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +G+VP    YN LI G C    L+ A+SL VE+       +   ++ILI G+ +    D 
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A  L ++M   G      M++  I  + K G +EKA  LF  M   G  P         G
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTP---------G 384

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
            R +      +++E +     + K Y++L+++ +   +    TY + + G C  G+++GA
Sbjct: 385 ARAY-----ASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             + KE+   G RP+ V Y TLI    +  R  DA R+  +M + G  P    Y SL+  
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG 499

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             + +K   A S  L+ + +    D  +  + I  +++ GE  +A + + EM     +  
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM----LECG 555

Query: 635 LAPYTIWLIGL----CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           + P  +   GL    C+ G+V EA + F  +VE   +    +   L++GL K G ++ A 
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAE 615

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKS 750
           ++F      G  + P V +Y      FSK      A  +   M   G   +  +Y     
Sbjct: 616 EIFHEMRGKG--IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY---NM 670

Query: 751 LLPGPWNTREME 762
           LL G   + E+E
Sbjct: 671 LLGGFCRSGEIE 682


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 262/513 (51%), Gaps = 14/513 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M   + +P V  +   L    +K+ +  A+++  +M       N+ + ++L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +    + A+ ++ +M + GI P+  T+  +I+GLC   +  EA  LF +M  SG 
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ ++YN ++NG CK      A+ + R  E++   P + +Y+ +ID L + +  +EA  
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +  +M +  I PDVV Y  ++ G    G++ +A +L  +M  R ++PDT  +N L+ G C
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++ +AR +   + ++ + PN +T+  L+ G C +  +D+A K+   M   GC P++ 
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI+G CK+  + +A  L  +M                N   D  +  T+++  C  
Sbjct: 378 SYNILINGYCKSKRMNEAKRLLSEM-------------SEKNLTPDTVTYSTLMQGLCQV 424

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G   +A  +  ++  SG LPD++ Y+ L++GFCK G+++ ALKL KE+  + ++P+ + Y
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             LI G+    + E A  +F ++  +G  P    Y  ++    +      A+  + +   
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMED 544

Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
           D    D  S    I+ FLQ  +   AIQ + EM
Sbjct: 545 DGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 238/474 (50%), Gaps = 19/474 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           VLI+   ++   + A+   GKM +   QPD   +N ++N    +     A+ ++ EMV  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+++++ +INGL K+G T +A+++  +M Q    PN  TY  +I  LC+    +EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
                +M D G  PD V YN +L+GFC L +++EA  L +       +P   +++ L+DG
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +     EA      M E+  EP+   Y  ++ G     ++ +A+K+L  M  +G  P+
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G+C    +++A+ L  E+ +++  P+T T++ L+ G+C+ G   +A  LF 
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVH 459
           +M  +G  P +  ++ L+DG CK G L++A  L  +M    I  N  L+  L +G     
Sbjct: 436 EMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG----- 490

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                         AG +  A ++  +L+  G  PDI TYN +I G  K G  + A + F
Sbjct: 491 -----------MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFF 539

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           ++++  G  PDS +Y  +I G  +      A ++  +M     +   + ++ L+
Sbjct: 540 RKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 230/440 (52%), Gaps = 13/440 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G    G  ++A+  F +M     +P+V  YN V+N   +    ++A+ V+ +M
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    PN+VT++ +I+ L K      A++ L EM  RGI P+  TY  ++ G C + + 
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL 287

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA RLF +M      PD V +N L++G CK   V EA  +  +  + G  P   +Y+ L
Sbjct: 288 NEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL 347

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG     + DEA      M  +   P++  Y ++I G  ++ ++ +A +LLS+M E+ +
Sbjct: 348 MDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNL 407

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PDT  Y+ L++G C +G   +A +L  E+     LP+   ++IL+ G C++G +D+A K
Sbjct: 408 TPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK 467

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L  +M +    P++ ++  LI G+  AG+LE A  LF K            LS  G R  
Sbjct: 468 LLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK------------LSADGIRP- 514

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   M++     GL  +AY+   ++ + G LPD  +YN +I GF +  + + A++L 
Sbjct: 515 DIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLI 574

Query: 520 KELQLKGLRPDSVTYGTLIN 539
            E+  K    DS T+  L++
Sbjct: 575 DEMVGKRFSADSSTFQMLLD 594



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 255/595 (42%), Gaps = 86/595 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  +Y MV++N  P++V F   +  ++K  +   A+ + ++M   G+  N ++      
Sbjct: 80  ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSL----- 134

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                         N L+N  C+L  VD A++++    K G  P
Sbjct: 135 ------------------------------NVLINCLCRLSHVDFAVSVMGKMFKLGIQP 164

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI+GL    +  EA   + +M     EP+V+ Y  +I GL + G    A+++ 
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF 224

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +    P+   YN +I   C   L+++A     E+  R   P+  T+  ++ G C  
Sbjct: 225 RKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL 284

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +++A +LF +M      P    FN L+DGLCK G + +A  +   M E G  P  +  
Sbjct: 285 GQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAY-- 342

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +   +++ YC    + +A K+L  +   G  P++ +YN LING+CK  
Sbjct: 343 ------------TYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK 390

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +N A +L  E+  K L PD+VTY TL+ GL +V R  +A  +F +M  +G  P    Y 
Sbjct: 391 RMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C+                   G  DE++K ++E  ++    N I          
Sbjct: 451 ILLDGFCKH------------------GHLDEALKLLKEMHERRIKPNIIL--------- 483

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  YTI + G+   G+++ A  +FS L          +   +I GL K G  D A 
Sbjct: 484 -------YTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + F     +GF+  P  C+Y +    F ++     A  L+  M    +  D+  +
Sbjct: 537 EFFRKMEDDGFL--PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 227/492 (46%), Gaps = 51/492 (10%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A   + +M      P VV +G  +  +++  +   A+ L + M   G+  + Y  N L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C L  +D A S+  +++K    P+  TF  LI G+C  G + +A  LFN+M  +G 
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+V  +N +I+GLCK G    A  +F KME  +                +  +  T+++
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKP-------------NVVTYNTIID 244

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C   L+++A + L ++ + G  PD++TYN++++GFC +G +N A +LFKE+  + + P
Sbjct: 245 SLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMP 304

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-L 588
           D+VT+  L++GL +     +A  +   M + G  P+   Y +LM   C   +   A   L
Sbjct: 305 DTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVL 364

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +   +  +         I  + +   +  A + L EM  K        Y+  + GLCQ 
Sbjct: 365 GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQV 424

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM-------------DVFLY 695
           G+ +EALN+F  +     +    +   L+ G CK G+LD A+             ++ LY
Sbjct: 425 GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILY 484

Query: 696 T--LKNGFI------------------LRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRM 733
           T  ++  FI                  +RP +  Y  +++ LL  K+     AY    +M
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLL--KEGLSDEAYEFFRKM 542

Query: 734 KSVGYDLDACLY 745
           +  G+  D+C Y
Sbjct: 543 EDDGFLPDSCSY 554



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 8/228 (3%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           +S  +NE   +L  ++  E  L P    ++ +T+   + +   P+     F        L
Sbjct: 388 KSKRMNEAKRLLSEMS--EKNLTP--DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL 443

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
               + S ++    K    D   + L E+    +     ++ +LI G +  G  E A E 
Sbjct: 444 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKEL 503

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F K+     +PD++ YN ++    ++ L   A   + +M     LP+  +++++I G  +
Sbjct: 504 FSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +  +  AI+++DEM  +    +  T+ +    L  +   DE    F++
Sbjct: 564 NQDSSTAIQLIDEMVGKRFSADSSTFQM----LLDLESHDEIISRFMR 607


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 270/558 (48%), Gaps = 40/558 (7%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V  YNAVL +A        A      M++    PN+ T+++L+  L   G+ E A+ +
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFC 249
           + +M   G  PN  TY  +++  C+    D A R+   M++ G   P+ V +N+++NG C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  R++ A  +     ++G  P + SY+ L+ G  +     E+ A + +M +  + PDVV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            +  +I    +AG ++ A+ L++ MRERG+  +   + ALI GFC  G LD A     E+
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            K    P+   +  LI G C+ G +D A++L  +ME     P V  ++ +I G CK G L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           + A  L  KM           L +G   + D  +  +++   C    ++ A ++   + +
Sbjct: 415 DSAFQLNQKM-----------LKKG--VLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD  TY +LI+G CK GN+  AL L  E+  KG+ PD VTY  LINGL +  R ++
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A R+  ++      P    Y +LM   C + +F    +L                  ++ 
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVAL------------------LKG 562

Query: 610 FLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           F  KG   E +   Q +L+ ++KL+    + Y+I + G C+ G V++AL+    ++    
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDG---SVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 667 IVTPPSCVKLIHGLCKRG 684
                S + L+ GL + G
Sbjct: 620 SPNSTSTISLVRGLFEEG 637



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 224/450 (49%), Gaps = 33/450 (7%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           GN       F  +++G  K G  E A + F +M      PDV  YN +L+   +      
Sbjct: 217 GNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHE 276

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           +LAV+ EM +   +P++VTF+ LI+   K+G  E A+ ++ +M +RG+  N+ T+T +I 
Sbjct: 277 SLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C+    D+A     +M+  G  P  V YNAL+NG+CKL R+D A  L+R  E     P
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +YS +I G  +    D A+   +KM ++ + PD + Y  +IRGL E  ++ DA +L 
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M + G+ PD + Y  LI G C  G +++A SL  E+ ++  LP+  T+++LI G+ ++
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
               +A +L  K+      P    ++AL+   C   E +                     
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALML-CCSKAEFK--------------------- 554

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      S+  +++ +C  GL+ +A K+   + +     D   Y+ LI+G C+ GN
Sbjct: 555 -----------SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +  AL   K++   G  P+S +  +L+ GL
Sbjct: 604 VRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 29/490 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+      G  E+A+   G M+   C P+   YN ++    R      A  V   M
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +  N  PN+VTF+ ++NGL K+G+ E A K+ DEM + G+ P+  +Y  ++SG C++  
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             E+  +F +M   G  PD V + +L++  CK   +++A+AL+    + G      +++ 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  +    D+A     +M +  I+P VV Y  +I G  + G++  A +L+ +M  + 
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y+ +I G+C +G LD A  L  ++ K+  LP+  T++ LI G+C    ++DA 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +LF  M + G  P    +  LIDG CK G +EKA  L  +M           + +G   +
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM-----------IRKG--VL 500

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN---------------SLI 503
            D  +   ++     +    +A+++L +L     +PD I Y+               +L+
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G +  A K+++ +  +  + D   Y  LI+G  R      A     QM ++G +
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620

Query: 564 PSPAVYKSLM 573
           P+     SL+
Sbjct: 621 PNSTSTISLV 630



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 244/523 (46%), Gaps = 35/523 (6%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  P+   Y  V+  L   +    A R    M   G +P+   YN L+   C   R++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIR 316
           + ++      G  P   +Y+ L+    RA   D A      M EE   +P++V +  M+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL +AG+++ A K+  +M   G+ PD   YN L+ G+C +G L ++ ++  E+ +R  +P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TFT LI   C+ G ++ A  L  +M + G   +   F ALIDG CK G L+ A L  
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M + G  P++                   ++  YC  G +  A +++ ++      PD
Sbjct: 352 EEMRKCGIQPSV--------------VCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TY+++I+G+CKVGN++ A +L +++  KG+ PD++TY +LI GL    R  DA  +F 
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-----DI------------SG 598
            M Q G  P    Y +L+   C+      A SL  + +R     D+            S 
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           R  E+ + + +   +  V + I+    M    +  +       L G C  G +KEA  ++
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             +++    +       LIHG C+ G +  A+      L++GF
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 210/431 (48%), Gaps = 20/431 (4%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P V  Y  ++  LS+A  +  A + LS M   G+ P+ Y YN L++  C  G L++A  +
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLC 424
             ++      PN  T+  L+   CR G +D A+++ + M E+    P++  FN++++GLC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG +E A  +F +M   G  P              D  S  T++  YC  G +H++  +
Sbjct: 235 KAGRMEGARKVFDEMVREGLAP--------------DVVSYNTLLSGYCKVGCLHESLAV 280

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ + G +PD++T+ SLI+  CK GN+  A+ L  +++ +GLR + VT+  LI+G  +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               +DA     +M + G  PS   Y +L+   C+  +  LA  L  +        D  +
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 604 MKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
             +I   + + G +++A Q   +M  K        Y+  + GLC++ ++ +A  +F  ++
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           +        +   LI G CK G ++ A+ +    ++ G +  P V  Y +     SK  +
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL--PDVVTYSVLINGLSKSAR 518

Query: 723 KVHAYHLLCRM 733
              A+ LL ++
Sbjct: 519 TKEAHRLLFKL 529



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 186/355 (52%), Gaps = 17/355 (4%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +V DV  F  LI    K G+ E+A+    +M+E   + +   + A+++   +K     AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EM K    P++V ++ LING  K G+ ++A +++ EM  + + P+  TY+ +ISG 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C++   D A++L  KM   G  PD + Y++L+ G C+ +R+++A  L  +  + G  P  
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LIDG  +    ++A + + +M  + + PDVV Y V+I GLS++ + K+A +LL  
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 334 MRERGIVPDTYCYN---------------ALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           +     VPD   Y+               AL+KGFC  GL+ +A  +   +  R+   + 
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             ++ILI G CR G V  A     +M ++G  P+     +L+ GL + G + +A+
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 33/344 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+   K    DL  + + E+ +  V      +  +ISGY KVG+ + A +   KM +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y++++     ++    A  ++  M++L   P+  T++ LI+G  K G  E 
Sbjct: 427 KGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEK 486

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN---- 242
           A+ + DEM ++G+LP+  TY+++I+GL +  R  EA+RL  K+      PD + Y+    
Sbjct: 487 ALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALML 546

Query: 243 -----------ALLNGFCKLRRVDEA-----LALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
                      ALL GFC    + EA       L R+++ DG V     YS LI G  R 
Sbjct: 547 CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSV-----YSILIHGHCRG 601

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
               +A +++++M      P+      ++RGL E G V +A   + D+     + D    
Sbjct: 602 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS 661

Query: 347 NALIKGFCDLGLLDQARSLQV--EIWKRDSLPNTH--TFTILIC 386
            ALI    DL   +     Q   EIW  +S P+     + + IC
Sbjct: 662 KALI----DLNRKEGMDYFQAQGEIWYSESSPSVEYWNYMMTIC 701


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 90  RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           RSG      DVF    L++GY + G  + A      M      PD Y Y  ++     + 
Sbjct: 106 RSG---TAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRG 159

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL++  +M+   C P++VT+++L+  + KS     A+++LDEM  +G  PN  TY 
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 219

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I+G+C+  R D+A     ++   G  PD V+Y  +L G C  +R ++   L     + 
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             +P   ++  L+    R    + A     +M       +  L  ++I  + + G+V DA
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            + L++M   G  PDT  Y  ++KG C     + A+ L  E+ +++  PN  TF   IC 
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+ G+++ A  L  +M + GC  ++  +NAL++G C  G ++ A  LFY M    N   
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459

Query: 448 FLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLA 488
           +  L  G     R+   A L                  +V  +C  GL+ +A +++ Q+ 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G  P++ITYN+L++G  K  N   AL+L   L   G+ PD VTY ++I  L R DR E
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +A ++F  +   G  P   +Y  ++   C+R
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKR 610



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 276/578 (47%), Gaps = 69/578 (11%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L    + G   + F Y  +++G C+  + D A RL
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M     +PD   Y  ++ G C   RV EAL+LL      G  P + +Y+ L++ + +
Sbjct: 136 IASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           +  + +A     +M  +   P++V Y V+I G+   G+V DA + L+ +   G  PDT  
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  ++KG C     +    L  E+ +++ +PN  TF +L+   CR GMV+ A ++  +M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP-----TLFLRLSQGGNRVH 459
             GC  +  + N +I+ +CK G ++ A      M   G +P     T  L+      R  
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 460 D-KASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D K  L+ MV +                C  GLI +A  ++ Q++E G   +I+TYN+L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC  G ++ AL+LF  +  K   P+++TY TL+ GL   +R + A  +  +M Q  C 
Sbjct: 433 NGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI--- 620
           P+   +  L+++ C++                  G  DE+++ +E+ ++ G   N I   
Sbjct: 490 PNVVTFNVLVSFFCQK------------------GLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 621 ------------QGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVEC 664
                       +  LE+   L    ++P    Y+  +  L ++ +V+EA+ +F ++ + 
Sbjct: 532 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 665 KAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNG 700
              + P + +  K++  LCKR   D A+D F Y + NG
Sbjct: 592 G--MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 235/485 (48%), Gaps = 18/485 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + ++  + K  GF    + LDE+R+   +     + V+I+G  + G  + A E  
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++  +  QPD   Y  VL      + +     ++ EM++ NC+PN VTF +L+    + 
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E AI++L++M+  G   N     IVI+ +C+  R D+A++    M   GCSPD ++Y
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 358

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C+  R ++A  LL+   +    P   +++  I  L +    ++A     +M E
Sbjct: 359 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              E ++V Y  ++ G    G+V  A++L   M  +   P+T  Y  L+ G C+   LD 
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 475

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ ++D  PN  TF +L+   C+ G++D+A +L  +M + GC P++  +N L+D
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535

Query: 422 GLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G+ K    E+A  LL   +  G +P              D  +  +++        + +A
Sbjct: 536 GITKDCNSEEALELLHGLVSNGVSP--------------DIVTYSSIIGVLSREDRVEEA 581

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   + + G  P  + YN ++   CK  N +GA+  F  +   G  P+ +TY TLI G
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641

Query: 541 LQRVD 545
           L   D
Sbjct: 642 LANED 646



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 236/533 (44%), Gaps = 22/533 (4%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA RL  +    G +PD      L+   C+  R  +A  +LR+ E+ G    + +Y+ L+
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  R  + D A      M    + PD   Y  +IRGL + G+V +A+ LL DM  RG  
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y  L++  C      QA  +  E+  +   PN  T+ ++I GMCR G VDDA++ 
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N++   G  P    +  ++ GLC A   E    LF +M                N + +
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-------------MEKNCMPN 284

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + +   +V  +C  G++ +A ++L Q++  G   +    N +IN  CK G ++ A +   
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G  PD+++Y T++ GL R +R EDA  +  +M +  C P+   + + +   C++ 
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
               A  L  Q        +  +  + +  F  +G V++A++    M  K N      YT
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT---YT 461

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             L GLC   ++  A  + + +++        +   L+   C++G +D A+++    +++
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           G        N LL  +  +KD     A  LL  + S G   D   Y     +L
Sbjct: 522 GCTPNLITYNTLLDGI--TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 162/340 (47%), Gaps = 3/340 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           VI+ + K    D  +Q L+ + S   S  +  +  ++ G  +    E A E   +M   +
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+   +N  + I  +K L   A  +  +M +  C  NIVT++ L+NG    G+ + A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++   M  +   PN  TYT +++GLC   R D A  L  +M    C+P+ V +N L++ F
Sbjct: 446 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+   +DEA+ L+    + G  P L +Y+ L+DG+ +    +EA      +    + PD+
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 562

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I  LS   +V++A+K+   +++ G+ P    YN ++   C     D A      
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +     +PN  T+  LI G+     + + + L  ++   G
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 147/311 (47%), Gaps = 3/311 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A     +M
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E  C+ ++  YNA++N    +     AL ++Y M    C PN +T++ L+ GL  + + 
Sbjct: 417 SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERL 473

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L EM Q+   PN  T+ +++S  CQ    DEA  L  +M + GC+P+ + YN L
Sbjct: 474 DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G  K    +EAL LL     +G  P + +YS +I  L R  R +EA   +  + +  +
Sbjct: 534 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P  V+Y  ++  L +      A+   + M   G +P+   Y  LI+G  +   L + R 
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653

Query: 365 LQVEIWKRDSL 375
           L  E+  R  L
Sbjct: 654 LLRELCSRGVL 664



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 180/416 (43%), Gaps = 47/416 (11%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L     + +A +L+     RG  PD Y    LI+  C  G    A  +     +  +
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
             +   +  L+ G CR G +D A++L   M  A   P    +  +I GLC  G + +A +
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LL   +  G  P++               +   ++E  C +    +A ++L ++   G  
Sbjct: 167 LLDDMLHRGCQPSVV--------------TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+I+TYN +ING C+ G ++ A +    L   G +PD+V+Y T++ GL    R ED   +
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-----IE 608
           F +M +  C P+   +  L+ + CR      A    +Q L  +SG    +  +     I 
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA----IQVLEQMSGHGCAANTTLCNIVIN 328

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
              ++G V++A Q L  M           YT  L GLC+  + ++A  +   +V      
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC-- 386

Query: 669 TPPSCV---KLIHGLCKRGYLDLA-------------MDVFLY-TLKNGFILRPRV 707
            PP+ V     I  LC++G ++ A             +++  Y  L NGF ++ RV
Sbjct: 387 -PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 161/558 (28%), Positives = 270/558 (48%), Gaps = 40/558 (7%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V  YNAVL +A        A      M++    PN+ T+++L+  L   G+ E A+ +
Sbjct: 116 PSVPAYNAVL-LALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFC 249
           + +M   G  PN  TY  +++  C+    D A R+   M++ G   P+ V +N+++NG C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  R++ A  +     ++G  P + SY+ L+ G  +     E+ A + +M +  + PDVV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            +  +I    +AG ++ A+ L++ MRERG+  +   + ALI GFC  G LD A     E+
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            K    P+   +  LI G C+ G +D A++L  +ME     P V  ++ +I G CK G L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           + A  L  KM           L +G   + D  +  +++   C    ++ A ++   + +
Sbjct: 415 DSAFQLNQKM-----------LKKG--VLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD  TY +LI+G CK GN+  AL L  E+  KG+ PD VTY  LINGL +  R ++
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A R+  ++      P    Y +LM   C + +F    +L                  ++ 
Sbjct: 522 AHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVAL------------------LKG 562

Query: 610 FLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           F  KG   E +   Q +L+ ++KL+    + Y+I + G C+ G V++AL+    ++    
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDG---SVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 667 IVTPPSCVKLIHGLCKRG 684
                S + L+ GL + G
Sbjct: 620 SPNSTSTISLVRGLFEEG 637



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 173/595 (29%), Positives = 281/595 (47%), Gaps = 78/595 (13%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++  ++ ++  LS +     A + L  M + G+ PN +TY I++  LC   R +EA  +
Sbjct: 116 PSVPAYNAVLLALSDASLPS-ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLF 284
              M+ +GC+P+ V YN L+  FC+   +D A  ++    ++G   P L +++ +++GL 
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A R + A   + +M  E + PDVV Y  ++ G  + G + +++ + S+M +RG+VPD  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            + +LI   C  G L+QA +L  ++ +R    N  TFT LI G C+ G +DDA     +M
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKAS 463
            K G  PSV  +NALI+G CK G ++ A  L  +ME                RV  D  +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREME--------------AKRVKPDVVT 400

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI-------------------- 503
             T++  YC  G +  A+++  ++ + G LPD ITY+SLI                    
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 460

Query: 504 ---------------NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
                          +G CK GN+  AL L  E+  KG+ PD VTY  LINGL +  R +
Sbjct: 461 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW---------------LQYL 593
           +A R+  ++      P    Y +LM   C + +F    +L                 Q +
Sbjct: 521 EAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM 579

Query: 594 RDISGRDDESMKSI--EEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLI-GLCQ 647
            D + + D S+ SI      + G V  A+   + +L   F  N    +  TI L+ GL +
Sbjct: 580 LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN----STSTISLVRGLFE 635

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +G V EA N    L+ C  +    +   LI    K G +D  +DV     ++G +
Sbjct: 636 EGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLL 690



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 222/442 (50%), Gaps = 33/442 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +++G  K G  E A + F +M      PDV  YN +L+   +      +LAV+ EM
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   +P++VTF+ LI+   K+G  E A+ ++ +M +RG+  N+ T+T +I G C+    
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A     +M+  G  P  V YNAL+NG+CKL R+D A  L+R  E     P + +YS +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +    D A+   +KM ++ + PD + Y  +IRGL E  ++ DA +L  +M + G+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y  LI G C  G +++A SL  E+ ++  LP+  T+++LI G+ ++    +A +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L  K+      P    ++AL+   C   E +                             
Sbjct: 525 LLFKLYHEDPVPDNIKYDALML-CCSKAEFK----------------------------- 554

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              S+  +++ +C  GL+ +A K+   + +     D   Y+ LI+G C+ GN+  AL   
Sbjct: 555 ---SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611

Query: 520 KELQLKGLRPDSVTYGTLINGL 541
           K++   G  P+S +  +L+ GL
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGL 633



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 238/490 (48%), Gaps = 29/490 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+      G  E+A+   G M+   C P+   YN ++    R      A  V   M
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213

Query: 160 VKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +  N  PN+VTF+ ++NGL K+G+ E A K+ DEM + G+ P+  +Y  ++SG C++  
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             E+  +F +M   G  PD V + +L++  CK   +++A+AL+    + G      +++ 
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  +    D+A     +M +  I+P VV Y  +I G  + G++  A +L+ +M  + 
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y+ +I G+C +G LD A  L  ++ K+  LP+  T++ LI G+C    ++DA 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +LF  M + G  P    +  LIDG CK G +EKA  L  +M           + +G   +
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM-----------IRKG--VL 500

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN---------------SLI 503
            D  +   ++     +    +A+++L +L     +PD I Y+               +L+
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFC  G +  A K+++ +  +  + D   Y  LI+G  R      A     QM ++G +
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620

Query: 564 PSPAVYKSLM 573
           P+     SL+
Sbjct: 621 PNSTSTISLV 630



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 244/523 (46%), Gaps = 35/523 (6%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  P+   Y  V+  L   +    A R    M   G +P+   YN L+   C   R++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIR 316
           + ++      G  P   +Y+ L+    RA   D A      M EE   +P++V +  M+ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL +AG+++ A K+  +M   G+ PD   YN L+ G+C +G L ++ ++  E+ +R  +P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TFT LI   C+ G ++ A  L  +M + G   +   F ALIDG CK G L+ A L  
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M + G  P++                   ++  YC  G +  A +++ ++      PD
Sbjct: 352 EEMRKCGIQPSVV--------------CYNALINGYCKLGRMDLARELIREMEAKRVKPD 397

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TY+++I+G+CKVGN++ A +L +++  KG+ PD++TY +LI GL    R  DA  +F 
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFE 457

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-----DI------------SG 598
            M Q G  P    Y +L+   C+      A SL  + +R     D+            S 
Sbjct: 458 NMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSA 517

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           R  E+ + + +   +  V + I+    M    +  +       L G C  G +KEA  ++
Sbjct: 518 RTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             +++    +       LIHG C+ G +  A+      L++GF
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 52/447 (11%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P V  Y  ++  LS+A  +  A + LS M   G+ P+ Y YN L++  C  G L++A  +
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLC 424
             ++      PN  T+  L+   CR G +D A+++ + M E+    P++  FN++++GLC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG +E A  +F +M   G  P              D  S  T++  YC  G +H++  +
Sbjct: 235 KAGRMEGARKVFDEMVREGLAP--------------DVVSYNTLLSGYCKVGCLHESLAV 280

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ + G +PD++T+ SLI+  CK GN+  A+ L  +++ +GLR + VT+  LI+G  +
Sbjct: 281 FSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCK 340

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQ 591
               +DA     +M + G  PS   Y +L+   C+  +  LA  L             + 
Sbjct: 341 KGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVT 400

Query: 592 YLRDISG-----RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           Y   ISG       D + +  ++ L+KG + +AI                 Y+  + GLC
Sbjct: 401 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT----------------YSSLIRGLC 444

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           ++ ++ +A  +F  +++        +   LI G CK G ++ A+ +    ++ G +  P 
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL--PD 502

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRM 733
           V  Y +     SK  +   A+ LL ++
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 186/355 (52%), Gaps = 17/355 (4%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +V DV  F  LI    K G+ E+A+    +M+E   + +   + A+++   +K     AL
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EM K    P++V ++ LING  K G+ ++A +++ EM  + + P+  TY+ +ISG 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C++   D A++L  KM   G  PD + Y++L+ G C+ +R+++A  L  +  + G  P  
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LIDG  +    ++A + + +M  + + PDVV Y V+I GLS++ + K+A +LL  
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 334 MRERGIVPDTYCYN---------------ALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           +     VPD   Y+               AL+KGFC  GL+ +A  +   +  R+   + 
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             ++ILI G CR G V  A     +M ++G  P+     +L+ GL + G + +A+
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 183/685 (26%), Positives = 314/685 (45%), Gaps = 77/685 (11%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTK--NPQVGFRFF--IWAAKRKRLRSFASNSAVISMLL 74
            P+ + L+P LS + V+S+       NP +  +FF  +   K     +  S+S ++ +L+
Sbjct: 72  HPSFQKLIPNLSPSHVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILI 131

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC----Q 130
             N F                V   +   +I     V D    L+   +M   D     +
Sbjct: 132 PNNLF---------------GVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFK 176

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
             V  YN +L +  R  +      VY EM+    +PNI T + ++N  SK G    A   
Sbjct: 177 LSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLY 236

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           + ++ Q G+ P+ FTYT +I G C+ N  + AY++F  M + GC  + V+Y  +++G C+
Sbjct: 237 VSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCE 296

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R+DE ++L +   +D   P + +Y+ +I  LF   R  E    + +M E   EP+V  
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y VM+  + +  K+ ++ ++L++M E+G+VP    YNALI+G+C+ G ++ A  +   + 
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             +  PN  T+  LICG  +   V  A  L +KM ++   PS+  +N+LI   CKAG  +
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A    YK+         L L +    V D+ +    ++  C +  + +A  +   L E 
Sbjct: 477 SA----YKL---------LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   + + Y +LI+G CK G I+ A+ L + +  +   P+S TY +LI G+ +  + ++ 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +   M + G  P+ A Y  L                                  IEE 
Sbjct: 584 LSMVENMSKMGVKPTVATYTIL----------------------------------IEEM 609

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L++G+ ++A +   +M    +   +  YT ++   C  G VKEA  + + ++E  A V P
Sbjct: 610 LREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIE--AGVMP 667

Query: 671 PSCVKLIHGLCKRGY--LDLAMDVF 693
            S   L + L    Y  L LA D F
Sbjct: 668 DS---LTYTLLISAYERLGLAYDAF 689



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 237/473 (50%), Gaps = 15/473 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY +  D   A + F  M    C+ +   Y  +++           ++++ +M + +
Sbjct: 255 LILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD 314

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P + T++++I+ L  + +    + + +EM +R   PN  TYT+++  +C+  + DE+ 
Sbjct: 315 CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESR 374

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           R+  +M + G  P  V YNAL+ G+C+  R++ AL +L   E +   P   +Y+ LI G 
Sbjct: 375 RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF 434

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K   +A     KM E K+ P +V Y  +I    +AG    A KLL  ++E G+VPD 
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + Y+  I   C    +++A  L   + ++    N   +T LI G C+ G +D+A  L  +
Sbjct: 495 WTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER 554

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M    C P+   +N+LI G+CK G++++   +   M ++G  PT+              A
Sbjct: 555 MHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV--------------A 600

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++E+    G    A ++  Q+   G+ PD+ TY + I+ +C  GN+  A  +   +
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
              G+ PDS+TY  LI+  +R+    DAF +  +M   GC PS  ++ +L+ +
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIWY 713



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 225/439 (51%), Gaps = 15/439 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G  + G  ++ +  F KM+E DC P V  Y  +++  F     L  + ++ EM 
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMR 346

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           + +C PN+ T++++++ + K  K + + ++L+EM ++G++P+  TY  +I G C+  R +
Sbjct: 347 ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIE 406

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +   M+ + C P+   YN L+ GF K + V +A+ LL    +    P L +Y+ LI
Sbjct: 407 AALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLI 466

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +A  +D AY     + E  + PD   Y V I  L ++ ++++A  L + ++E+GI 
Sbjct: 467 HVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIK 526

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            +   Y ALI G C  G +D+A SL   +   D LPN+ T+  LI G+C+ G V +   +
Sbjct: 527 ANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSM 586

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
              M K G  P+V  +  LI+ + + G+ + AN +F +M   G  P ++           
Sbjct: 587 VENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVY----------- 635

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +    +  YCT+G + +A  ++ ++ E+G +PD +TY  LI+ + ++G    A  + 
Sbjct: 636 ---TYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692

Query: 520 KELQLKGLRPDSVTYGTLI 538
           K +   G  P    +  LI
Sbjct: 693 KRMLDAGCDPSHPIWNNLI 711



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 230/475 (48%), Gaps = 18/475 (3%)

Query: 33  TVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           T TS+I+   +  +    ++ F     +   R+  S + +I  L +    D       ++
Sbjct: 251 TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM 310

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R  +       + V+I   +      + ++ F +M+E  C+P+V+ Y  +++   +++  
Sbjct: 311 REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKL 370

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             +  +  EM++   +P++VT++ LI G  + G+ E A+++L  M      PN+ TY  +
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G  +     +A  L  KM +S  +P  V YN+L++  CK    D A  LL   +++G 
Sbjct: 431 ICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGL 490

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           VP   +YS  ID L ++KR +EA   +  + E+ I+ + V+Y  +I G  +AGK+ +A+ 
Sbjct: 491 VPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAIS 550

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL  M     +P++  YN+LI G C  G + +  S+   + K    P   T+TILI  M 
Sbjct: 551 LLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEML 610

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
           R G  D A ++FN+M   G  P V  + A I   C +G +++A  +  +M E G  P   
Sbjct: 611 REGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMP--- 667

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                      D  +   ++  Y   GL + A+ +L ++ ++G  P    +N+LI
Sbjct: 668 -----------DSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 226/516 (43%), Gaps = 28/516 (5%)

Query: 258 LALLRSFEKDG----FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           L  LR   +D     F   + SY+ L+  L R    DE    Y +M  + I P++     
Sbjct: 160 LDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNT 219

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+   S+ G + +A   +S + + G+ PD++ Y +LI G+C    ++ A  +   +  + 
Sbjct: 220 MVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG 279

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
              N  ++T +I G+C  G +D+   LF KM +  C+P+V  +  +I  L       +  
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            LF +M          R       VH   +   MV+  C    + ++ +IL ++ E G +
Sbjct: 340 DLFNEM----------RERSCEPNVH---TYTVMVDAMCKERKLDESRRILNEMMEKGLV 386

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P ++TYN+LI G+C+ G I  AL++   ++    RP+  TY  LI G  +      A  +
Sbjct: 387 PSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTL 446

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFL 611
             +M ++  TPS   Y SL+   C+   F  A+ L L  L++     D+   S  I+   
Sbjct: 447 LSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL-LDLLKENGLVPDQWTYSVFIDTLC 505

Query: 612 QKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           +   +E A      L E   K N+     YT  + G C+ G++ EA+++   +     + 
Sbjct: 506 KSKRMEEACDLFNSLKEKGIKANEVM---YTALIDGHCKAGKIDEAISLLERMHSEDCLP 562

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   LI+G+CK G +   + +     K G  ++P V  Y +      ++    HA  
Sbjct: 563 NSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG--VKPTVATYTILIEEMLREGDFDHANR 620

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENM 764
           +  +M S G+  D   Y           N +E E M
Sbjct: 621 VFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGM 656


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 166/604 (27%), Positives = 303/604 (50%), Gaps = 36/604 (5%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR---GILPNKFTYTIVIS 211
           V   M +L+C+P++ + ++L+ GL    +++ A+++L  M      G  P+  +YT VI+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +   +D+AY  + +M D   SPD V Y++++   CK + +D+A+ +L +  K+G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ ++ G   +++  EA  + +KM  + +EPDVV Y  ++  L + G+  +A K+ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y  L++G+   G L +  +L   + +    P+ H F ILIC   + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             VD+A  +F+KM + G  P+V  + A+I  LCK+G ++ A L F +M + G  P + + 
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 451 LSQGGNRVH--------DKAS-----------------LQTMVEQYCTAGLIHKAYKILM 485
            S     +H        DKA                    +++  +C  G + ++ K+  
Sbjct: 445 TSL----IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  P++ITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING  RV 
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G +P+   Y  ++      R+ + A  L++   +  +  +  +  
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT--IWLIGLCQDGQVKEALNIFSVLVE 663
            I   L K  + +    + + +  L D QL   T  I +  L + G+  EA ++F+ L  
Sbjct: 621 IILHGLCKNNLTDEALRMFQ-NLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              +    +   +   L ++G L+   D+FL   +NG     R+ N ++R LL   D  +
Sbjct: 680 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 739

Query: 724 VHAY 727
              Y
Sbjct: 740 AGTY 743



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 176/647 (27%), Positives = 292/647 (45%), Gaps = 105/647 (16%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V+ Y  ++    R     L  A    +VK       +TF+ L+ GL    +T  A+ +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 191 -LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD---SGCSPDFVAYNALLN 246
            L  MT+   +P+ F+ TI++ GLC  NR+ EA  L   M D    G +PD V+Y  ++N
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 247 GF-----------------------------------CKLRRVDEALALLRSFEKDGFVP 271
           GF                                   CK + +D+A+ +L +  K+G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ ++ G   +++  EA  + +KM  + +EPDVV Y  ++  L + G+  +A K+ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y  L++G+   G L +  +L   + +    P+ H F ILIC   + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             VD+A  +F+KM + G  P+V  + A+I  LCK+G ++ A L F +M + G  P + + 
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 451 LSQGGNRVH--------DKAS-----------------LQTMVEQYCTAGLIHKAYKILM 485
            S     +H        DKA                    +++  +C  G + ++ K+  
Sbjct: 445 TSL----IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  P++ITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING  RV 
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G +P+   Y  ++      R+ + A  L++               
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV--------------- 605

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                   G  ++  Q            +L+ Y I L GLC++    EAL +F  L    
Sbjct: 606 --------GITKSGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
             +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 691



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 241/509 (47%), Gaps = 51/509 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +KA  ++ +M +    PDV  Y++++    + Q    A+ V   MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +PN +T++ +++G   S + + AI  L +M   G+ P+  TY  ++  LC+  R+ 
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  PD   Y  LL G+     + E  ALL    ++G  P    ++ LI
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               + ++ DEA   + KM +  + P+VV YG +I  L ++G V DAM     M + G+ 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y +LI   C     D+A  L +E+  R    NT  F  +I   C+ G V +++KL
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+ M + G  P+V  ++ LIDG C AG++++A  L   M  +G  P              
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP-------------- 544

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII---------------------- 497
           D  +  T++  YC    +  A  +  ++  SG  P+II                      
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604

Query: 498 -------------TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                        TYN +++G CK    + AL++F+ L L  L+ ++ T+  +I  L +V
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            R ++A  +F  +  NG  P    Y SLM
Sbjct: 665 GRNDEAKDLFAALSANGLVPDVRTY-SLM 692



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/545 (24%), Positives = 242/545 (44%), Gaps = 13/545 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R+      + S++I+ L K    D   + L  
Sbjct: 197 VSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTT 256

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  ++ GY      ++A+    KM+    +PDV  YN++++   +   
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  ++  M K    P+I T+  L+ G +  G       +LD M + GI P+   + I
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  + DEA  +F KM+  G +P+ V Y A++   CK   VD+A+        +G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ LI  L    ++D+A     +M +  I  + + +  +I    + G+V ++ 
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           KL   M   G+ P+   Y+ LI G+C  G +D+A  L   ++     P+  T+  LI G 
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           CR   +DDA  LF +M  +G  P++  +N ++ G            LF+         L+
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQG------------LFHTRRTAAAKELY 604

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           + +++ G ++ + ++   ++   C   L  +A ++   L  +    +  T+N +I    K
Sbjct: 605 VGITKSGTQL-ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           VG  + A  LF  L   GL PD  TY  +   L      E+   +F  M +NGCT +  +
Sbjct: 664 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 723

Query: 569 YKSLM 573
             S++
Sbjct: 724 LNSIV 728



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 259/573 (45%), Gaps = 47/573 (8%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + +E+ +RG   + +     ++ + + + A    R + +M  +G    +P    Y
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    PDV    ++++GL +  + ++A++LL   +D R  G  PD   Y  +I GF   G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R   P+  T++ +I  +C+   +D A ++   M K G  P+   +N
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVH----------- 459
           +++ G C + + ++A     KM   G  P      +L   L + G               
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 460 ----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+  T+++ Y T G + + + +L  +  +G  PD   +N LI  + K   ++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++  GL P+ VTYG +I  L +    +DA   F QM   G TP+  VY SL+  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEV---ENAIQGLLEMDFKLN 631
            C   K+  A  L L+ L R I          I    ++G V   E     ++ +  K N
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
              +  Y+  + G C  G++ EA  + S +    ++   P CV    LI+G C+   +D 
Sbjct: 511 ---VITYSTLIDGYCLAGKMDEATKLLSSMF---SVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 689 AMDVFLYTLKNGFILRPRVCNY--LLRSLLFSK 719
           A+ +F   + +G  + P +  Y  +L+ L  ++
Sbjct: 565 ALALFKEMVSSG--VSPNIITYNIILQGLFHTR 595



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 187/408 (45%), Gaps = 45/408 (11%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L+ +A+  A++ M             LD +    +     VF +LI  Y K    ++A+ 
Sbjct: 343 LQGYATKGALVEM----------HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F KM++    P+V  Y AV+ I  +      A+  + +M+     PNI+ ++ LI+ L 
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 180 -----------------------------------KSGKTEVAIKMLDEMTQRGILPNKF 204
                                              K G+   + K+ D M + G+ PN  
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY+ +I G C   + DEA +L   M   G  PD V YN L+NG+C++ R+D+ALAL +  
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G  P + +Y+ ++ GLF  +R   A   Y  + +   + ++  Y +++ GL +    
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A+++  ++    +  +T  +N +I     +G  D+A+ L   +     +P+  T++++
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              +   G++++   LF  ME+ GC  +  M N+++  L + G++ +A
Sbjct: 693 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 112/238 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY   G  ++A +    M     +PD   YN ++N   R      ALA++ EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PNI+T+++++ GL  + +T  A ++   +T+ G      TY I++ GLC+ N  
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA R+F  +  +    +   +N ++    K+ R DEA  L  +   +G VP + +YS +
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            + L      +E    +  M E     +  +   ++R L + G +  A   LS + E+
Sbjct: 693 AENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 35/263 (13%)

Query: 485 MQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           M  A +G + P + TY  LI   C+ G ++        +  KG R +++T+  L+ GL  
Sbjct: 75  MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134

Query: 544 VDREEDAFRI-FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
             R  DA  I   +M +  C P       L+   C   +   A  L      D  G    
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG---- 190

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                      G   + +                 YT  + G  ++G   +A + +  ++
Sbjct: 191 -----------GSAPDVVS----------------YTTVINGFFKEGDSDKAYSTYHEML 223

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           + +      +   +I  LCK   +D AM+V    +KNG +      N +L     S+  K
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
           +  A   L +M+S G + D   Y
Sbjct: 284 E--AIGFLKKMRSDGVEPDVVTY 304


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 181/705 (25%), Positives = 324/705 (45%), Gaps = 69/705 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
           LS   V  ++   KNP      F       R   ++    V   +LK    P       +
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIF---DSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIA 143
            ++ +R+       DV   +I  Y K    ++AL+ F +M E F CQP +  YN++LN  
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 144 FRKQLFLLALA--VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                +  A +  +Y+E + L+  PN+ T+++LI    +  + + A ++L+ M ++G  P
Sbjct: 125 IESNKWDEAESFFLYFETMGLS--PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSP 182

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + F+Y  +I+ L +     +A +LF +M + G +PD   YN L++GF K   +  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 262 RSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
               K   V P + SY+ +I+GL +  ++DE++  + +M + +   D+  Y  +I GL  
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK---RDSLPN 377
           +G +  A ++  +M E G+ PD   YN ++ G+   G +++     +E+WK   ++    
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC----LELWKVMEKEGCRT 358

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             ++ ILI G+  N  VD+A  ++  + +  C      +  L+ GLCK G L KA  +  
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + E G+                D  +  +M+   C  G + +   +L Q+ + G  P+  
Sbjct: 419 EAENGRGDL-------------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
             N++INGF +   +  AL+ F  +  KG  P  VTY TLINGL + +R  +A+ +  +M
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-----DI------------SGRD 600
              G  P+   Y  LM   C+ +K  +A +LW Q L      D+            SG+ 
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 601 DESMKSIEEFLQKGEVENAI--QGLLEMDFKLNDFQLA-----------------PYTIW 641
           +++++   E  Q+  V N +    L+E  +K+ DF+ A                  Y I 
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
           L GLC   ++ +A+   +  V+   + T  +   L+  +   G L
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 243/557 (43%), Gaps = 93/557 (16%)

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRR 253
           TQ+   P     T VI    + +  D+A  +F +M +  GC P   +YN+LLN   +  +
Sbjct: 71  TQKCKCPEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 129

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
            DEA +    FE  G  P L +Y+ LI    R K++D+A      M+E+   PDV  YG 
Sbjct: 130 WDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGT 189

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF-------------------- 353
           +I  L++ G + DA+KL  +M ERG+ PD  CYN LI GF                    
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249

Query: 354 ----------------CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                           C  G  D++  +   + K +   + +T++ LI G+C +G +D A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT-----LFLRLS 452
            +++ +M + G  P V ++N +++G  +AG +E+   L+  ME     T     + +R  
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369

Query: 453 QGGNRVHDKASLQ----------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
               +V +  S+                  +V   C  G ++KA  IL +        D 
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
             Y+S+ING C+ G ++    +  ++   G +P+      +ING  R  + EDA R FG 
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M   GC P+   Y +L+    +  +FS A++L                  ++E L KG  
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYAL------------------VKEMLHKGWK 531

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
            N I                 Y++ + GLCQ  ++  ALN++   +E            +
Sbjct: 532 PNMIT----------------YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 575

Query: 677 IHGLCKRGYLDLAMDVF 693
           IHGLC  G ++ A+ ++
Sbjct: 576 IHGLCSSGKVEDALQLY 592



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 207/458 (45%), Gaps = 17/458 (3%)

Query: 290 DEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           D+A   +++M E    +P +  Y  ++  L E+ K  +A          G+ P+   YN 
Sbjct: 95  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 154

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LIK  C     D+A+ L   +W++   P+  ++  LI  + +NG + DA KLF++M + G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  +N LIDG  K G++  A+             ++ RL +G +   +  S   M+
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNAS------------EIWERLLKGPSVYPNIPSYNVMI 262

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G   ++++I  ++ ++    D+ TY++LI+G C  GN++GA +++KE+   G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD V Y T++NG  R  R E+   ++  M + GC  +   Y  L+       K   A S+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381

Query: 589 W-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           W L   +D           +    + G +  A+  L E +    D     Y+  + GLC+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           +G++ E   +   + +      P  C  +I+G  +   L+ A+  F   +  G       
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 501

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N L+  L  SK  +   AY L+  M   G+  +   Y
Sbjct: 502 YNTLINGL--SKAERFSEAYALVKEMLHKGWKPNMITY 537


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 277/576 (48%), Gaps = 48/576 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E  C PD + Y  VL           AL +   M K    C P++VT++ +I+G  K
Sbjct: 69  RMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFK 128

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            GK   A  +  EM Q+G +P+  T+  +I+ LC+    D A  L  +M D+G  P+ V 
Sbjct: 129 EGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVT 188

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y ++++G+  L R +EA  + R     G +P + S++  +D L +  R  EA   +  M 
Sbjct: 189 YTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMA 248

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +   P++V YG+++ G +  G   D M   + M+  GIV +   +  LI  +   G++D
Sbjct: 249 AKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMD 308

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  E+  +   P+  T++ LI  +CR G + DA   FN+M   G  P+  ++++LI
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368

Query: 421 DGLCKAGELEKANLLFYKMEIGKNP--------TLFLRLSQGGNRVHDKASL-------- 464
            G C  G+L KA  L Y+M     P        ++   + + G RV D   +        
Sbjct: 369 QGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG-RVMDAHHIFDLVKDIG 427

Query: 465 --------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T+++ YC  G + KA+ +L  +  +G  PD  TYN+L+NG+ K G I+  L
Sbjct: 428 ERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGL 487

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+E+  K ++P +VTY  +++GL R  R   A ++  +M   G T S   Y  ++   
Sbjct: 488 NLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGL 547

Query: 577 CRRRKFSLAFSLWLQYLR-----DISGRDD--ESMKSIEEFLQKGEVENAIQGLLEMDFK 629
           CR      A  ++ +        +I+  +    SM +++   +  ++ +AI         
Sbjct: 548 CRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI--------- 598

Query: 630 LNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVL 661
            +D  L P    Y I +  L ++G V+EA N+FS +
Sbjct: 599 -SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 243/556 (43%), Gaps = 64/556 (11%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-A 259
           P  FTY +V++G C+  R +     F ++  +G   D  A N +L   C  +R D+A+  
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK--IEPDVVLYGVMIRG 317
           LLR   + G VP   SY+ ++  L    R  +A    R M +E+    PDVV Y  +I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+  A  L  +M ++G VPD   +N++I   C    +D A  L  ++      PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+T +I G    G  ++A K+F +M   G  P +  +N+ +D LCK G  ++A  +FY
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 438 KMEI-GKNPTL---------------------FLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            M   G  P +                     F    +G   V +      +++ Y   G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           ++ +A  IL ++   G  PD+ TY++LI+  C++G +  A+  F ++   G++P++V Y 
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGC-TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
           +LI G         A  +  +M  NG   P+ A + S++   C+  +   A  ++   ++
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF-DLVK 424

Query: 595 DISGRDD------------------------ESMKS-------------IEEFLQKGEVE 617
           DI  R D                        ++M S             +  + + G ++
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           + +    EM  K        Y I L GL + G+   A  +   ++ C   V+ P+   ++
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544

Query: 678 HGLCKRGYLDLAMDVF 693
            GLC+    D A+ +F
Sbjct: 545 KGLCRNNCTDEAIVMF 560



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 223/501 (44%), Gaps = 14/501 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           +++++I+ L K    D     L ++    V      +  +I GY  +G  E+A + F +M
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREM 212

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 PD+  +N+ ++   +      A  ++Y M      PNIVT+ +L++G +  G  
Sbjct: 213 TGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCF 272

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
              +   + M   GI+ N   +TI+I    +    DEA  +  +M+  G SPD   Y+ L
Sbjct: 273 ADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTL 332

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  C++ R+ +A+         G  P    Y  LI G        +A     +M    I
Sbjct: 333 ISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGI 392

Query: 305 -EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P++  +  ++  + + G+V DA  +   +++ G   D   +N LI G+C +G + +A 
Sbjct: 393 PRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAF 452

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           S+   +      P+T T+  L+ G  ++G +DD   LF +M      P+   +N ++DGL
Sbjct: 453 SVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL 512

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            +AG    A  + ++M IG   T+ L             +   +++  C      +A  +
Sbjct: 513 FRAGRTVAAQKMLHEM-IGCGTTVSL------------PTYNIILKGLCRNNCTDEAIVM 559

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             +L       +I T N++IN    V     A  LF  +   GL P++ TYG +I  L +
Sbjct: 560 FQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLK 619

Query: 544 VDREEDAFRIFGQMPQNGCTP 564
               E+A  +F  M ++GC P
Sbjct: 620 EGSVEEADNMFSSMEKSGCAP 640


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/585 (29%), Positives = 284/585 (48%), Gaps = 37/585 (6%)

Query: 10  TILDTVTP-----IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAA------KRK 58
           TILD +       I+     + P L  T +TS+    K P + F+F           K K
Sbjct: 15  TILDLIHSSQWHFIKHLAHKITPSLISTALTSL---HKTPDLAFQFVTHIGFGDLDIKSK 71

Query: 59  RLR----SFASNSAVISMLLKP---NGFDLYWQTLDEL--RSGNVSVVSDVFF-VLISGY 108
            L     S A NS     LLK    +G     +  +EL    G + + + V + +LI   
Sbjct: 72  CLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRAC 131

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            ++   + A E F  MK     P V+  N +L++  +      A  +Y EM ++    ++
Sbjct: 132 CELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSV 191

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VTF+++IN L K GK + A + +  M   GI PN  TY  +I G C   R + A  +F  
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           MK  G  PD   Y + ++G CK  +++EA  +L   ++ G  P   +Y+ LIDG      
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A+ +  KM  E + P V  Y ++I  L    K+ +A  ++ +M E+G+VPD+  YN 
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C  G + +A +L  E+  +   P   T+T LI  + + G +  A  LF K+ + G
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            FP + MFNALIDG C  G +++A  +  +M+  K              V D+ +  T++
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK-------------VVPDEVTFNTLM 478

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C  G +  A +++ ++   G  PD I+YN+LI+G+ K G++  A ++  E+   G  
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFN 538

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           P  +TY  LI GL + +  + A ++  +M   G TP+   Y SL+
Sbjct: 539 PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 226/463 (48%), Gaps = 23/463 (4%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V + LLI    +  + + A +  D M  +G++P+      ++S   + NR ++A+ L+ +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M         V +N ++N  CK  ++ +A   +   E  G  P + +Y+ +I G     R
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A   +  M    ++PD   YG  I G+ + GK+++A  +L  M+E G+ P    YN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C+ G L+ A   + ++ +   +P   T+ +LI  +  +  +D+A  +  +M + G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------LFLRLSQGGNRVH-- 459
             P    +N LI+G C+ G ++KA  L  +M   G  PT      L   LS+ G      
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 460 -------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        D      +++ +C  G + +A+ +L ++ +   +PD +T+N+L+ G 
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G +  A +L +E++ +G++PD ++Y TLI+G  +    +DAFR+  +M   G  P+ 
Sbjct: 482 CREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTL 541

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIE 608
             Y +L+   C+  +   A  L  + + + I+  D+  +  IE
Sbjct: 542 LTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 170/338 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D ++   V   S  +   ISG  K G  E+A     KMKE   +P    YN +++    
Sbjct: 249 FDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCN 308

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K    +A     +MV+   +P + T+++LI+ L    K + A  ++ EM+++G++P+  T
Sbjct: 309 KGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVT 368

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y I+I+G C+     +A+ L  +M   G  P  V Y +L+    K  R+ +A  L     
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIV 428

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P L  ++ LIDG       D A+A  ++M + K+ PD V +  +++G    GKV+
Sbjct: 429 RKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +L+ +M+ RGI PD   YN LI G+   G +  A  ++ E+      P   T+  LI
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            G+C+N   D A++L  +M   G  P+   + +LI+G+
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 213/506 (42%), Gaps = 92/506 (18%)

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           +V Y+ L+   C+L+R D+A       +  G +P + + + ++    ++ R ++A+  Y 
Sbjct: 121 YVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYA 180

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +MF  +I+  VV + +MI  L + GK+K A + +  M   GI                  
Sbjct: 181 EMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIK----------------- 223

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
                             PN  T+  +I G C  G V+ A+ +F+ M+  G  P    + 
Sbjct: 224 ------------------PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYG 265

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           + I G+CK G+LE+A+ +  KM EIG  PT                +  T+++ YC  G 
Sbjct: 266 SFISGMCKEGKLEEASGMLEKMKEIGLRPT--------------AVTYNTLIDGYCNKGN 311

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGF---CKVGNINGALKLFKELQLKGLRPDSVT 533
           +  A+    ++   G +P + TYN LI+     CK+   +G   + KE+  KGL PDSVT
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADG---IIKEMSEKGLVPDSVT 368

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LING  R    + AF +  +M   G  P+   Y SL+    +R +   A  L+    
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLF---- 424

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                         E+ ++KG   + I                 +   + G C +G +  
Sbjct: 425 --------------EKIVRKGIFPDLIM----------------FNALIDGHCANGNMDR 454

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A  +   + + K +    +   L+ G C+ G ++ A ++       G  ++P   +Y   
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG--IKPDHISYNTL 512

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGYD 739
              +SK      A+ +   M S+G++
Sbjct: 513 ISGYSKRGDMKDAFRVRDEMLSIGFN 538


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 193/723 (26%), Positives = 316/723 (43%), Gaps = 66/723 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLD 87
           LS+  V  ++   KN +    FF WA  R+  R +  + +     L++    +  ++   
Sbjct: 55  LSQRLVGVILHMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFK 114

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E     +   S  + +LI G    G  + A   + +M +   +P V     +LN   +  
Sbjct: 115 EKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSG 174

Query: 148 LFLLAL-------------------------------AVYYEMVKLNCLPNIVTFSLLIN 176
              LAL                                 Y+E +K   +PN  T++++IN
Sbjct: 175 NLELALRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVIN 234

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K+GK   A ++L EM     +P    YT VI G C+     +AY L   MK  G   
Sbjct: 235 GLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQG 290

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D + YN L++G C+L+ +D A  LL   + + FVP + +Y  LI GL RAKR  EA    
Sbjct: 291 DNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLL 350

Query: 297 RKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +  E+   P+VV Y  +I G S+A +V DA +L  +M   G  PD   Y+ LI+G C+
Sbjct: 351 GTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCN 410

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G   +A S   E+  +  LP    ++ +I G+CR G +D A  +F+ M   GC P++ +
Sbjct: 411 AGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAV 470

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNP----------------------TLFLRLS 452
           +N+LI GLCK G L  A L   +M E G +P                       L++R  
Sbjct: 471 YNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSL 530

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           + G  + + +    +    C    + +A ++L  +  +GN P    Y ++I   CK  N+
Sbjct: 531 EQGIEISETSCNVVIASLRC----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNL 586

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +L +++   G++PD  T   L+  + R D+   A     +M + G  PS   Y +L
Sbjct: 587 AEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTL 646

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDE--SMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +    +  K S A  +  + +   S   DE   +  I  +  + +VE A   L E+  K 
Sbjct: 647 LNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKW 706

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               +  Y   L GL +   ++    +   +   + +V   +   LI G C+ G  D A+
Sbjct: 707 GIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAV 766

Query: 691 DVF 693
            V 
Sbjct: 767 RVL 769



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 284/633 (44%), Gaps = 35/633 (5%)

Query: 109 YKVGDCEKALESFG-KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + V + E A+  FG      D +  V+ YN       R      A  ++ E      +P+
Sbjct: 65  HMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPD 124

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            +T+ +LI GL   GK ++A  + +EM  RG+ P   T   +++ LC+    + A R F 
Sbjct: 125 SITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFE 184

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           KM    C+     +  L++G  +  RVDEA        K   +P   +Y+ +I+GL +A 
Sbjct: 185 KMSSIPCA---ATWTILIDGLFRAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAG 240

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           +  EA     ++ +E   P +  Y  +I G  +AG +  A  LL DM+ +G   D   YN
Sbjct: 241 KVAEA----ERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYN 296

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME-K 406
            LI G C L  +D+A  L  E+   D +P+  T+ ILI G+CR   + +A+ L   +  +
Sbjct: 297 TLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNE 356

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
             C P+V  +N LIDG  KA  +  A  LF +M   G++P              D  +  
Sbjct: 357 DDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP--------------DVVTYS 402

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++   C AG   +A+  L ++     LP +  Y+S+I+G C+ G ++ A  +F  +   
Sbjct: 403 TLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVAN 462

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P+   Y +LI GL +  R  DA     +M + GC+P    Y +L+   CR  +   A
Sbjct: 463 GCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEA 522

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI-G 644
             L   Y+R +    + S  S    +         Q +L +     +   A +   +I  
Sbjct: 523 CDL---YVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIES 579

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           LC++  + EA  +   ++         +   L+  +C++    +AM      ++ G   +
Sbjct: 580 LCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGS--K 637

Query: 705 PRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKS 735
           P V  Y  LL +L   K  K   A+ +L R+ S
Sbjct: 638 PSVGTYSTLLNALF--KAGKPSEAHVVLRRLIS 668



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 171/666 (25%), Positives = 311/666 (46%), Gaps = 44/666 (6%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           ++  L P++  L+   + + + K+ N ++  R+F    K   +   A+ + +I  L +  
Sbjct: 152 VDRGLRPVV--LTCKFLLNALCKSGNLELALRYF---EKMSSIPCAATWTILIDGLFRAI 206

Query: 78  GFDLYWQTLDELRSGNVSVVSD-VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
             D      +E++  + ++ ++  + V+I+G  K G   +A     +M      P +  Y
Sbjct: 207 RVDEACYYFEEMK--HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANY 260

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
            +V+    +      A  +  +M +     + +T++ LI+G  +  + + A ++L+EM  
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVD 255
              +P+ FTY I+I+GLC+  R  EA  L   ++ +  C+P+ V+YN L++GF K  RV+
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVN 380

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +A  L       G  P + +YS LI GL  A R  EA+++  +M  +KI P V +Y  +I
Sbjct: 381 DAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVI 440

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL  AG++  A  +   M   G  P+   YN+LI G C  G L  A+    E+ +R   
Sbjct: 441 SGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCS 500

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL-CKAGELEKAN- 433
           P+  T+  LI G+CR    D+A  L+ +  + G   S    N +I  L C    LE+A  
Sbjct: 501 PDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC----LEQAQR 556

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +L   +  G +PT F                 T++E  C    + +A ++L  +  +G  
Sbjct: 557 VLRVVLATGNSPTAFF--------------YATVIESLCKENNLAEARQLLEDMIGAGIK 602

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD  T ++L+   C+      A+   +E+   G +P   TY TL+N L +  +  +A  +
Sbjct: 603 PDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVV 662

Query: 554 FGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
             ++     C P    Y  L+     + +   A ++ LQ L+   G   +S+ +    L+
Sbjct: 663 LRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNV-LQELKSKWG--IQSIVAYNTLLK 719

Query: 613 KGEVENAIQGLLEM--DFKLNDFQL--APYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
                  +Q + E+  + K N+F +  A + I + G C+ GQ   A+ + S   E K ++
Sbjct: 720 GLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLS---EMKKVL 776

Query: 669 TPPSCV 674
           TP + +
Sbjct: 777 TPSAAI 782


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 283/592 (47%), Gaps = 51/592 (8%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSK 180
           +M +  C P+V+ YN +L     +     AL +   M     +C P++V+++ +ING  K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A     EM  RGILPN  TY  +I+ LC+    D+A  +   M  +G  P+   
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN++++G+C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  ++P++  YG +++G +  G + +   LL  M   GI P+ Y ++ LI  +   G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           QA  +  ++ ++   P+T T+  +I  +C++G V+DA + F +M      P   ++N+LI
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             LC   + +KA  L  +M           L +G     D     ++++ +C  G + ++
Sbjct: 452 HSLCIFDKWDKAKELILEM-----------LDRG--ICLDTIFFNSIIDSHCKEGRVIES 498

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   +   G  P+IITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING
Sbjct: 499 EKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLING 558

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             ++ R EDA  +F +M  +G +P    Y  ++    + R+ + A  L++          
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV---------- 608

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                        G  E+  Q            +L+ Y I L GLC++    EAL +F  
Sbjct: 609 -------------GITESGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQN 644

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           L      +   +   +I  L K G  D A D+F     NG +  P V  Y L
Sbjct: 645 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV--PDVRTYSL 694



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 267/580 (46%), Gaps = 53/580 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +KA  ++ +M +    P+V  YN+++    + Q    A+ V   MV
Sbjct: 202 YTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMV 261

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +PN  T++ +++G   SG+ + AI  L +M   G+ P+  TY  ++  LC+  R  
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  P+   Y  LL G+     + E   LL    ++G  P    +S LI
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +  + D+A   + KM ++ + PD V YG +I  L ++G+V+DAM+    M +  + 
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+LI   C     D+A+ L +E+  R    +T  F  +I   C+ G V +++KL
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+ M + G  P++  ++ LIDG C AG++++A  L   M  +G  P              
Sbjct: 502 FDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-------------- 547

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII---------------------- 497
           D  +  T++  YC    +  A  +  ++  SG  PDII                      
Sbjct: 548 DCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 607

Query: 498 -------------TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                        TYN +++G CK    + AL++F+ L L  L+ ++ T+  +I  L +V
Sbjct: 608 VGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 667

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R ++A  +F  +  NG  P    Y SLM  +   +            + +     +  M
Sbjct: 668 GRNDEAKDLFAALSANGLVPDVRTY-SLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 726

Query: 605 KS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            +  + + LQ+G++  A   L  +D K    + +  +++L
Sbjct: 727 LNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 254/576 (44%), Gaps = 72/576 (12%)

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVA 240
            E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P+   
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSR-YNRMARAGADEVTPNLCT 93

Query: 241 Y-----------------------------------NALLNGFCKLRRVDEALAL-LRSF 264
           Y                                     LL G C  +R  +A+ + LR  
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAG 322
            + G +P + SY+ L+ GL    R  EA    + M ++  +  PDVV Y  +I G  + G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +  A     +M +RGI+P+   YN++I   C    +D+A  +   + K   +PN  T+ 
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EI 441
            ++ G C +G   +A     KM   G  P V  +N+L+D LCK G   +A  +F  M + 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P +               +  T+++ Y T G + + + +L  +  +G  P+   ++ 
Sbjct: 334 GLKPEI--------------TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           LI  + K G ++ A+ +F +++ +GL PD+VTYGT+I  L +  R EDA R F QM    
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEV---E 617
            +P   VY SL+   C   K+  A  L L+ L      D     S I+   ++G V   E
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
                ++ +  K N   +  Y+  + G C  G++ EA  + + +V   ++   P CV   
Sbjct: 500 KLFDLMVRIGVKPN---IITYSTLIDGYCLAGKMDEATKLLASMV---SVGMKPDCVTYN 553

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            LI+G CK   ++ A+ +F     +G  + P +  Y
Sbjct: 554 TLINGYCKISRMEDALVLFREMESSG--VSPDIITY 587



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 182/397 (45%), Gaps = 41/397 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y K G  ++A+  F KM++    PD   Y  V+ I  +      A+  + +M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 160 VKLNCLPNIVTFSLLINGLS-----------------------------------KSGKT 184
           +     P  + ++ LI+ L                                    K G+ 
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             + K+ D M + G+ PN  TY+ +I G C   + DEA +L   M   G  PD V YN L
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG+CK+ R+++AL L R  E  G  P + +Y+ ++ GLF+ +R   A   Y  + E   
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           + ++  Y +++ GL +     +A+++  ++    +  +T  +N +I     +G  D+A+ 
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +     +P+  T++++   +   G++++   LF  ME+ GC  +  M N+++  L 
Sbjct: 676 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 735

Query: 425 KAGELEKANLLFYKME------IGKNPTLFLRLSQGG 455
           + G++ +A    + ++           +LFL L  GG
Sbjct: 736 QRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGG 772



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 212/459 (46%), Gaps = 34/459 (7%)

Query: 292 AYAWYRKMFE---EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           A + Y +M     +++ P++  YG++I     AG++      L ++ ++G   D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 349 LIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           L+KG C     D+  S  ++I  R       +PN  ++ IL+ G+C      +A +L   
Sbjct: 132 LLKGLC----ADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 404 MEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           M   G  C P V  +  +I+G  K G+L+KA   +++M           L +G   + + 
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM-----------LDRG--ILPNV 234

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  +++   C A  + KA ++L  + ++G +P+  TYNS+++G+C  G    A+   K+
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT-WSCRRR 580
           +   G+ PD VTY +L++ L +  R  +A ++F  M + G  P    Y +L+  ++ +  
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
              +   L L     I          I  + ++G+V+ A+    +M  +  +     Y  
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLK 698
            +  LC+ G+V++A+  F  +++ +  ++P + V   LIH LC     D A ++ L  L 
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDER--LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            G  L     N ++ S    K+ + + +  L   M  +G
Sbjct: 473 RGICLDTIFFNSIIDS--HCKEGRVIESEKLFDLMVRIG 509



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 36/241 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+GY K+   E AL  F +M+     PD+  YN +L   F+ +    A  +Y  +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +      + T++++++GL K+  T+ A++M   +    +     T+ I+I  L ++ R 
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670

Query: 220 DEAYRLF-----------------------------------LKMKDSGCSPDFVAYNAL 244
           DEA  LF                                   L M+++GC+ +    N++
Sbjct: 671 DEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSI 730

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    +   +  A   L   ++  F     + S  +D L    +Y E + +  + ++  I
Sbjct: 731 VRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLD-LLSGGKYQEYHRFLPEKYKSFI 789

Query: 305 E 305
           E
Sbjct: 790 E 790


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/456 (32%), Positives = 232/456 (50%), Gaps = 51/456 (11%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +VF VLI  + ++G  E+AL  + KM   D  P +   N VL+   +K  F     VY +
Sbjct: 127 NVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVYGD 183

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV     PN+VT+  LI+G  + G    A ++ DEM ++ I P    YTI+I GLC  +R
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +F  M++SG  P+   YN +++G+CK+  V +AL L +    DG +P + ++  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDGL +      A  +   M    + P++ +Y  +I G  +AG + +A+ L S++ +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I+PD + Y+ LIKG C +  +++A  L  E+ K+  LPN  T+  LI G C+ G ++ A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           ++ ++M + G  P++  F+ LIDG CKAG++E A  L+ +M I                 
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI----------------- 466

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                                           G LPD++ Y +LI+G  K GN   A +L
Sbjct: 467 -------------------------------KGLLPDVVAYTALIDGHFKDGNTKEAFRL 495

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            KE+Q  GL P+  T   LI+GL +  R  DA ++F
Sbjct: 496 HKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 247/501 (49%), Gaps = 46/501 (9%)

Query: 116 KALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +ALE F  + +  D   +  +Y+A++++    +L+  A  +  ++++  CL N       
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQ--CLQN------- 102

Query: 175 INGLSKSGKTEVAI-KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
               S+  +   ++  +L  +      PN F   ++I    ++   +EA  ++ KM    
Sbjct: 103 ----SRRSRICCSVFNVLSRLESSKFTPNVFG--VLIIAFSEMGLVEEALWVYYKMD--- 153

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P   A N +L+G  K  R D    +       G  P + +Y  LIDG  R   + +A+
Sbjct: 154 VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAF 213

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M E+KI P VV+Y ++IRGL    ++ +A  +   MR  G++P+ Y YN ++ G+
Sbjct: 214 RLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGY 273

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +  + +A  L  E+     LPN  TF ILI G+C+   +  A+K    M   G  P++
Sbjct: 274 CKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNI 333

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKN---PTLF-----LRLSQGGNRVHDKASL- 464
            ++N LIDG CKAG L +A  L    EI K+   P +F     ++   G +R+ +   L 
Sbjct: 334 FVYNCLIDGYCKAGNLSEA--LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 465 ---------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                           T+++ YC  G + KA ++  Q+ E G  P+IIT+++LI+G+CK 
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A+ L+ E+ +KGL PD V Y  LI+G  +    ++AFR+  +M + G  P+    
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 570 KSLMTWSCRRRKFSLAFSLWL 590
             L+   C+  + S A  L+L
Sbjct: 512 SCLIDGLCKDGRISDAIKLFL 532



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 194/377 (51%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L +  + + V+  L+K   FD  W+   ++ +   S     +  LI G  + GD  KA  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F +M E    P V IY  ++     +     A +++  M     LPN+ T++ +++G  
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K    + A+++  EM   G+LPN  T+ I+I GLC+ +    A +  + M   G  P+  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+CK   + EAL+L    EK   +P + +YS LI GL    R +EA    ++M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            ++   P+ V Y  +I G  + G ++ A+++ S M E+GI P+   ++ LI G+C  G +
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           + A  L  E+  +  LP+   +T LI G  ++G   +A +L  +M++AG  P+V   + L
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 420 IDGLCKAGELEKANLLF 436
           IDGLCK G +  A  LF
Sbjct: 515 IDGLCKDGRISDAIKLF 531



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 206/459 (44%), Gaps = 25/459 (5%)

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +L   E   F P +  +  LI         +EA   Y KM    + P +    +++ GL 
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G+     K+  DM  RG  P+   Y  LI G C  G   +A  L  E+ ++   P   
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            +TILI G+C    + +A+ +F  M  +G  P++  +N ++DG CK   ++KA  L+ +M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                         G   + +  +   +++  C    +  A K L+ +A  G +P+I  Y
Sbjct: 290 -------------LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N LI+G+CK GN++ AL L  E++   + PD  TY  LI GL  VDR E+A  +  +M +
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVEN 618
            G  P+   Y +L+   C+      A  +  Q   + I          I+ + + G++E 
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC--KAIVTPPSCVKL 676
           A+    EM  K     +  YT  + G  +DG  KEA  +   + E      V   SC  L
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC--L 514

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           I GLCK G +  A+ +FL   K G        N L RSL
Sbjct: 515 IDGLCKDGRISDAIKLFL--AKTGTDTTGSKTNELDRSL 551



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L S++ +I      +R ++A   +R+M  + ++PD+V   V +   ++ G +     + +
Sbjct: 697 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHA 756

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            +R RG+  D    N+LI  +   G +  AR   +       LPN  TF  ++      G
Sbjct: 757 YIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSL------VLPNDVTFMGVLMACSHAG 810

Query: 393 MVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           +V++ ++ F  M E     P +  F  ++D LC+AG L +A     KM +  N  ++  L
Sbjct: 811 LVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTL 870



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 104/268 (38%), Gaps = 24/268 (8%)

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           KQ+  L +   +E       P I   + LI+  S +G    A  M DE+  +    N  +
Sbjct: 651 KQMHALVINFGFE-------PIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLIS 699

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +T VIS      R ++A +LF +M+     PD V     L+    L  +D    +     
Sbjct: 700 WTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIR 759

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G    L   + LI+   +      A     + F   +  DV   GV++   S AG V+
Sbjct: 760 HRGLDTDLCLNNSLINMYSKCGEIGTA-----RRFSLVLPNDVTFMGVLM-ACSHAGLVE 813

Query: 326 DAMKLLSDMRER-GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           +  +    M+E   + P    +  ++   C  GLL +A      I K    PN   +  L
Sbjct: 814 EGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF---ILKMPVRPNAVVWRTL 870

Query: 385 ICGMCRNGMVDDAQKLFNKMEK---AGC 409
           +      GM D    + N++++    GC
Sbjct: 871 LGACSLQGMWDKKMLVRNQIKQRRDPGC 898


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 296/615 (48%), Gaps = 16/615 (2%)

Query: 117 ALESFGKMKEFDC---QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
           A+E F +M    C    P +Y YN ++N   R +   L L V+  +++    P++ +++ 
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI+G SK G+ + A  +  +M ++GI+PN  TY+ +I+GLC+    D+A R+  +M  +G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+ + YN L++G+       E++ + +       VP +G+ +  +  L +  R  EA 
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +  M  +  +PDV+ YG ++ G + AG +     L + M   G+VPD + +N LI  +
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             LG++D++  +  ++ K+   P+  TF+ +I   CR G +DDA + FN M   G  P  
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +++ LI G C   +L KA  L   M     P   ++               +++   C 
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF------------FTSIINNLCK 517

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + +   ++  +  +G  P++IT+NSL++G+C VGN+  A+ L   ++  G+ PD  T
Sbjct: 518 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 577

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TL++G  +  R +DA  +F  M     T +   Y  ++    + R+  +A  ++ + +
Sbjct: 578 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 637

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVK 652
                    +  ++   L +    +    LLE  F +N  F +  + I +  + + G+ +
Sbjct: 638 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQ 697

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  +F+ +     + T  +   +I  L K    + A ++F    K+      R+ N ++
Sbjct: 698 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757

Query: 713 RSLLFSKDNKKVHAY 727
           R LL   +  K   Y
Sbjct: 758 RMLLNKGEVAKAGNY 772



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 268/567 (47%), Gaps = 29/567 (5%)

Query: 89  LRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           LR+G   +  DVF    LI G+ K G+ +KA + F KM+E    P+V  Y++++N   + 
Sbjct: 216 LRTG---LGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKT 272

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    A  V  +MV     PN +T++ LI+G S SG  + ++++  EM+   ++P+    
Sbjct: 273 KEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNC 332

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
              ++ LC+  R  EA  +F  M   G  PD ++Y ALL+G+     +     L      
Sbjct: 333 NSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC 392

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           +G VP    ++ LI+   R    D++   +  M ++ + PD++ +  +I      G++ D
Sbjct: 393 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 452

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILI 385
           AM+  + M + G+ PDT  Y+ LI+G C+   L +A+ L  ++  +    P    FT +I
Sbjct: 453 AMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII 512

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKN 444
             +C+ G V + + + + +   G  P++  FN+L+DG C  G +++A  L   ME +G  
Sbjct: 513 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 572

Query: 445 PTLFL----------------RLSQGGNRVHDKASLQTMVEQYCTAGLIHK-----AYKI 483
           P ++                  L+   + +H + +L ++       GL        A ++
Sbjct: 573 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 632

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ ESG    I TY +++ G C+    + A  L ++L    ++ D +T+  +I  + +
Sbjct: 633 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 692

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           V R ++A  +F  +   G  P+   Y+ ++T   +   F  A +L+    +     D   
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752

Query: 604 MKS-IEEFLQKGEVENAIQGLLEMDFK 629
           +   I   L KGEV  A   L ++D K
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKK 779



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 234/517 (45%), Gaps = 32/517 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L K    D   + L ++    V   +  +  LI GY   G  ++++  F +M  
Sbjct: 263 SSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSS 322

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV   N+ +    +      A  ++  MV     P+++++  L++G + +G    
Sbjct: 323 SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAG 382

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              + + M   G++P++  +  +I+   ++   D++  +F  M   G +PD + ++ +++
Sbjct: 383 MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 442

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC+L R+D+A+         G  P    YSCLI G    +   +A      M  + I P
Sbjct: 443 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP 502

Query: 307 DVV-LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC-------DLGL 358
             +  +  +I  L + G+V +   ++  +   G  P+   +N+L+ G+C        +GL
Sbjct: 503 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 562

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFN 417
           LD   S+ VE       P+ +T+  L+ G C++G +DDA  LF  M  K     SV  +N
Sbjct: 563 LDSMESVGVE-------PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS-YN 614

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            ++ GL +A     A  +F++M E G   +           +H  A   T++   C    
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVS-----------IHTYA---TVLGGLCRNNC 660

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             +A  +L +L       DI+T+N +I    KVG    A +LF  +   GL P  +TY  
Sbjct: 661 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 720

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +I  L + +  EDA  +F  M ++ CTP   +   ++
Sbjct: 721 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 757



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 220/486 (45%), Gaps = 42/486 (8%)

Query: 111 VGDCEK---ALESFGKMKE----FDC------QPDVYIYNAVLN-------IAFRKQLFL 150
           VG+C     AL   G++KE    FD       +PDV  Y A+L+       IA    LF 
Sbjct: 329 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 388

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +       MV    +P+   F+ LIN  ++ G  + ++ M ++MT++G+ P+  T++ VI
Sbjct: 389 V-------MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 441

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S  C++ R D+A   F  M D+G  PD   Y+ L+ G C  R + +A  L+      G  
Sbjct: 442 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 501

Query: 271 PR-LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           P  +  ++ +I+ L +  R  E       +      P+++ +  ++ G    G +K+A+ 
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL  M   G+ PD Y YN L+ G+C  G +D A +L  ++  +     + ++ I++ G+ 
Sbjct: 562 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 621

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           +      A+++F++M ++G   S+  +  ++ GLC+    ++AN+L  K        LF 
Sbjct: 622 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEK--------LF- 672

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                 N   D  +   ++      G   +A ++   ++  G +P I+TY  +I    K 
Sbjct: 673 ----SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKE 728

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            +   A  LF  ++     PDS     +I  L        A     ++ + G  P  A  
Sbjct: 729 ESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE-ATT 787

Query: 570 KSLMTW 575
            SL+ +
Sbjct: 788 TSLLIY 793



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 159/375 (42%), Gaps = 36/375 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S VIS   +    D   +  + +    V   + V+  LI G     D  KA E    M  
Sbjct: 438 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 497

Query: 127 FDCQPD-VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               P  +  + +++N   ++        V   ++     PN++TF+ L++G    G  +
Sbjct: 498 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 557

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+ +LD M   G+ P+ +TY  ++ G C+  R D+A  LF  M     +   V+YN +L
Sbjct: 558 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 617

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G  + RR   A  +     + G    + +Y+ ++ GL R    DEA     K+F   ++
Sbjct: 618 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 677

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            D++ + ++IR + + G+ ++A +L + +   G+VP                        
Sbjct: 678 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTIL--------------------- 716

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
                         T+ ++I  + +    +DA  LF+ MEK+ C P   + N +I  L  
Sbjct: 717 --------------TYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 762

Query: 426 AGELEKANLLFYKME 440
            GE+ KA     K++
Sbjct: 763 KGEVAKAGNYLSKID 777



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 39/280 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ GY  VG+ ++A+     M+    +PD+Y YN +++   +      AL ++ +M
Sbjct: 542 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +        V+++++++GL ++ +T VA +M  EM + G+  +  TY  V+ GLC+ N  
Sbjct: 602 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 661

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  L  K+       D + +N ++    K+ R  EA  L  +    G VP + +Y  +
Sbjct: 662 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVM 721

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--------------------- 318
           I  L + + +++A   +  M +    PD  +   +IR L                     
Sbjct: 722 ITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGI 781

Query: 319 --------------SEAGKVKDAMKLLSD----MRERGIV 340
                         S  GK ++ +KLL +    +RE+  V
Sbjct: 782 LPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAV 821



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + V+  L + N  D     L++L S NV      F ++I   +KVG  ++A E F
Sbjct: 644 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 703

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +  +   P +  Y  ++    +++ F  A  ++  M K +C P+    + +I  L   
Sbjct: 704 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 763

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           G+   A   L ++ ++GILP   T +++I
Sbjct: 764 GEVAKAGNYLSKIDKKGILPEATTTSLLI 792


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 296/615 (48%), Gaps = 16/615 (2%)

Query: 117 ALESFGKMKEFDC---QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
           A+E F +M    C    P +Y YN ++N   R +   L L V+  +++    P++ +++ 
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI+G SK G+ + A  +  +M ++GI+PN  TY+ +I+GLC+    D+A R+  +M  +G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+ + YN L++G+       E++ + +       VP +G+ +  +  L +  R  EA 
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +  M  +  +PDV+ YG ++ G + AG +     L + M   G+VPD + +N LI  +
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             LG++D++  +  ++ K+   P+  TF+ +I   CR G +DDA + FN M   G  P  
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +++ LI G C   +L KA  L   M     P   ++               +++   C 
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF------------FTSIINNLCK 446

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + +   ++  +  +G  P++IT+NSL++G+C VGN+  A+ L   ++  G+ PD  T
Sbjct: 447 EGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 506

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TL++G  +  R +DA  +F  M     T +   Y  ++    + R+  +A  ++ + +
Sbjct: 507 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMI 566

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVK 652
                    +  ++   L +    +    LLE  F +N  F +  + I +  + + G+ +
Sbjct: 567 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQ 626

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  +F+ +     + T  +   +I  L K    + A ++F    K+      R+ N ++
Sbjct: 627 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686

Query: 713 RSLLFSKDNKKVHAY 727
           R LL   +  K   Y
Sbjct: 687 RMLLNKGEVAKAGNY 701



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 263/557 (47%), Gaps = 26/557 (4%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    LI G+ K G+ +KA + F KM+E    P+V  Y++++N   + +    A  V 
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +MV     PN +T++ LI+G S SG  + ++++  EM+   ++P+       ++ LC+ 
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R  EA  +F  M   G  PD ++Y ALL+G+     +     L      +G VP    +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+   R    D++   +  M ++ + PD++ +  +I      G++ DAM+  + M +
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGMVD 395
            G+ PDT  Y+ LI+G C+   L +A+ L  ++  +    P    FT +I  +C+ G V 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL----- 449
           + + + + +   G  P++  FN+L+DG C  G +++A  L   ME +G  P ++      
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511

Query: 450 -----------RLSQGGNRVHDKASLQTMVEQYCTAGLIHK-----AYKILMQLAESGNL 493
                       L+   + +H + +L ++       GL        A ++  ++ ESG  
Sbjct: 512 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 571

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
             I TY +++ G C+    + A  L ++L    ++ D +T+  +I  + +V R ++A  +
Sbjct: 572 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKEL 631

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
           F  +   G  P+   Y+ ++T   +   F  A +L+    +     D   +   I   L 
Sbjct: 632 FAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLN 691

Query: 613 KGEVENAIQGLLEMDFK 629
           KGEV  A   L ++D K
Sbjct: 692 KGEVAKAGNYLSKIDKK 708



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 234/517 (45%), Gaps = 32/517 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L K    D   + L ++    V   +  +  LI GY   G  ++++  F +M  
Sbjct: 192 SSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSS 251

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV   N+ +    +      A  ++  MV     P+++++  L++G + +G    
Sbjct: 252 SLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAG 311

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              + + M   G++P++  +  +I+   ++   D++  +F  M   G +PD + ++ +++
Sbjct: 312 MDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 371

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC+L R+D+A+         G  P    YSCLI G    +   +A      M  + I P
Sbjct: 372 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP 431

Query: 307 DVV-LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC-------DLGL 358
             +  +  +I  L + G+V +   ++  +   G  P+   +N+L+ G+C        +GL
Sbjct: 432 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 491

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFN 417
           LD   S+ VE       P+ +T+  L+ G C++G +DDA  LF  M  K     SV  +N
Sbjct: 492 LDSMESVGVE-------PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS-YN 543

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            ++ GL +A     A  +F++M E G   +           +H  A   T++   C    
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVS-----------IHTYA---TVLGGLCRNNC 589

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             +A  +L +L       DI+T+N +I    KVG    A +LF  +   GL P  +TY  
Sbjct: 590 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 649

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +I  L + +  EDA  +F  M ++ CTP   +   ++
Sbjct: 650 MITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEII 686



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 220/486 (45%), Gaps = 42/486 (8%)

Query: 111 VGDCEK---ALESFGKMKE----FDC------QPDVYIYNAVLN-------IAFRKQLFL 150
           VG+C     AL   G++KE    FD       +PDV  Y A+L+       IA    LF 
Sbjct: 258 VGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFN 317

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +       MV    +P+   F+ LIN  ++ G  + ++ M ++MT++G+ P+  T++ VI
Sbjct: 318 V-------MVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 370

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S  C++ R D+A   F  M D+G  PD   Y+ L+ G C  R + +A  L+      G  
Sbjct: 371 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 430

Query: 271 PR-LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           P  +  ++ +I+ L +  R  E       +      P+++ +  ++ G    G +K+A+ 
Sbjct: 431 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 490

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL  M   G+ PD Y YN L+ G+C  G +D A +L  ++  +     + ++ I++ G+ 
Sbjct: 491 LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLF 550

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           +      A+++F++M ++G   S+  +  ++ GLC+    ++AN+L  K        LF 
Sbjct: 551 QARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEK--------LF- 601

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                 N   D  +   ++      G   +A ++   ++  G +P I+TY  +I    K 
Sbjct: 602 ----SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKE 657

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            +   A  LF  ++     PDS     +I  L        A     ++ + G  P  A  
Sbjct: 658 ESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE-ATT 716

Query: 570 KSLMTW 575
            SL+ +
Sbjct: 717 TSLLIY 722



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 155/355 (43%), Gaps = 1/355 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S VIS   +    D   +  + +    V   + V+  LI G     D  KA E    M  
Sbjct: 367 STVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLS 426

Query: 127 FDCQPD-VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               P  +  + +++N   ++        V   ++     PN++TF+ L++G    G  +
Sbjct: 427 KGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMK 486

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+ +LD M   G+ P+ +TY  ++ G C+  R D+A  LF  M     +   V+YN +L
Sbjct: 487 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIIL 546

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G  + RR   A  +     + G    + +Y+ ++ GL R    DEA     K+F   ++
Sbjct: 547 HGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVK 606

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            D++ + ++IR + + G+ ++A +L + +   G+VP    Y  +I         + A +L
Sbjct: 607 FDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNL 666

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
              + K    P++     +I  +   G V  A    +K++K G  P     + LI
Sbjct: 667 FSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 721



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 39/280 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ GY  VG+ ++A+     M+    +PD+Y YN +++   +      AL ++ +M
Sbjct: 471 TFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +        V+++++++GL ++ +T VA +M  EM + G+  +  TY  V+ GLC+ N  
Sbjct: 531 LHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCT 590

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  L  K+       D + +N ++    K+ R  EA  L  +    G VP + +Y  +
Sbjct: 591 DEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVM 650

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--------------------- 318
           I  L + + +++A   +  M +    PD  +   +IR L                     
Sbjct: 651 ITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGI 710

Query: 319 --------------SEAGKVKDAMKLLSD----MRERGIV 340
                         S  GK ++ +KLL +    +RE+  V
Sbjct: 711 LPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLREQAAV 750



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 70/149 (46%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + V+  L + N  D     L++L S NV      F ++I   +KVG  ++A E F
Sbjct: 573 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 632

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +  +   P +  Y  ++    +++ F  A  ++  M K +C P+    + +I  L   
Sbjct: 633 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           G+   A   L ++ ++GILP   T +++I
Sbjct: 693 GEVAKAGNYLSKIDKKGILPEATTTSLLI 721


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 246/512 (48%), Gaps = 24/512 (4%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    L++GY + G  + A      M      PD Y Y  ++     +     ALA+ 
Sbjct: 108 DVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALL 164

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +M++  C P++VT+++L+  + KS     A+ +LDEM  +G  PN  TY ++I+G+C+ 
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R D+A  +  ++   G  PD V+Y  +L G C  RR D+   L         VP   ++
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             L+    R    + A    ++M +    P+  L  ++I  + + G+V DA   L++M  
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PDT  Y  +++G C  G  + A+ L  E+ +++  PN  TF   IC +C+ G+++ 
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-- 454
           A KL   M + GC   +  +NAL+ G C  G ++ A  LF  +    N   +  L  G  
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLC 464

Query: 455 -GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              R+   A L                  +V  +C  G + +A +++ Q+ E G  P++I
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 524

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           T+N+L++G  K  N   AL+L   L  KG+  D++TY ++++ L R DR E+A ++   +
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
              G  P   +Y  ++   C+R +   A   +
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFF 616



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 263/558 (47%), Gaps = 29/558 (5%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L      G   + F Y  +++G C+  R D A RL
Sbjct: 72  PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL 131

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M      PD   Y  ++ G C   RV +ALALL    + G  P + +Y+ L++ + +
Sbjct: 132 IASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCK 188

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           +  + EA     +M  +   P++V Y V+I G+   G+V DA ++L+ +   G  PD   
Sbjct: 189 SSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 248

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  ++KG C     D  + L  E+  +  +PN  TF +L+   CR GMV+ A ++  +M 
Sbjct: 249 YTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMS 308

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP-----TLFLR-LSQGGNRV 458
           + GC P+  + N +I+ +CK G ++ A      M + G NP     T  LR L + G   
Sbjct: 309 QHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWE 368

Query: 459 HDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           H K  L  MV +                C  GLI +A K++  + E G    I+TYN+L+
Sbjct: 369 HAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +GFC  G ++ AL+LF  L  +   P+++TY TL+ GL   +R + A  +   M Q  C 
Sbjct: 429 HGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCP 485

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQG 622
            +   +  L+++ C++     A  L  Q +      +  +  ++ + + K    E A++ 
Sbjct: 486 LNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALEL 545

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L  +  K        Y+  +  L ++ + +EA+ +   + +           K++  LCK
Sbjct: 546 LHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCK 605

Query: 683 RGYLDLAMDVFLYTLKNG 700
           R   D A+D F Y + NG
Sbjct: 606 RCETDQAIDFFAYMVSNG 623



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/547 (25%), Positives = 246/547 (44%), Gaps = 26/547 (4%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA RL       G +PD      L+   C+  R  +A  +LR+ E  G    + +Y+ L+
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  R  R D A      M    + PD   Y  +IRGL + G+V DA+ LL DM +RG  
Sbjct: 117 AGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQ 173

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y  L++  C      +A ++  E+  +   PN  T+ ++I GMCR G VDDA+++
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 233

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N++   G  P +  +  ++ GLC A   +   +LF +M   K              V +
Sbjct: 234 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC-------------VPN 280

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + +   +V  +C  G++ +A ++L Q+++ G  P+    N +IN  CK G ++ A     
Sbjct: 281 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 340

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            + + G  PD+++Y T++ GL R  R E A  +  +M +  C P+   + + +   C++ 
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 400

Query: 581 KFSLA---FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
               A     L  +Y   +      ++  +  F  +G V++A++    +  + N      
Sbjct: 401 LIEQAIKLIELMPEYGCSVGIVTYNAL--VHGFCVQGRVDSALELFNNLPCEPNTIT--- 455

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           YT  L GLC   ++  A  + + +++    +   +   L+   C++G+++ AM++    +
Sbjct: 456 YTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMM 515

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWN 757
           ++G        N LL  +  +KD     A  LL  + S G  LD   Y     +L     
Sbjct: 516 EHGCTPNLITFNTLLDGI--TKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDR 573

Query: 758 TREMENM 764
           T E   M
Sbjct: 574 TEEAIQM 580



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 231/500 (46%), Gaps = 16/500 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + ++  + K +GF      LDE+R+   +     + V+I+G  + G  + A E  
Sbjct: 175 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 234

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++  +  QPD+  Y  VL      + +     ++ EMV   C+PN VTF +L+    + 
Sbjct: 235 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 294

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E AI++L +M+Q G  PN     IVI+ +C+  R D+AY     M   GC+PD ++Y
Sbjct: 295 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISY 354

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C+  R + A  LL    +    P   +++  I  L +    ++A      M E
Sbjct: 355 TTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 414

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                 +V Y  ++ G    G+V  A++L +++      P+T  Y  L+ G C    LD 
Sbjct: 415 YGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDA 471

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L   + ++D   N  TF +L+   C+ G V++A +L N+M + GC P++  FN L+D
Sbjct: 472 AAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 531

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           G+ K    E+A  L + + + K  +L            D  +  ++V+         +A 
Sbjct: 532 GITKDCNSEEALELLHGL-VSKGVSL------------DTITYSSVVDVLSREDRTEEAI 578

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++L  + + G  P +  YN ++   CK    + A+  F  +   G  P+  TY  LI GL
Sbjct: 579 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 638

Query: 542 QRVDREEDAFRIFGQMPQNG 561
                 ++A  +  ++   G
Sbjct: 639 AHEGLLKEARYVLSELYAKG 658



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 176/416 (42%), Gaps = 54/416 (12%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTY------------------------------ 344
           +R L     + +A +L+     RG  PD Y                              
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 345 -----CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
                 YN L+ G+C  G LD AR L   I      P+ +T+T +I G+C  G V DA  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCK-AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           L + M + GC PSV  +  L++ +CK +G  E  N+L      G  P +           
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV---------- 212

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++   C  G +  A +IL +L+  G  PDI++Y +++ G C     +    L
Sbjct: 213 ----TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 268

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F E+  K   P+ VT+  L+    R    E A ++  QM Q+GCTP+  +   ++   C+
Sbjct: 269 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 328

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAP 637
           + +   A+             D  S  ++   L + G  E+A + L EM  K        
Sbjct: 329 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 388

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           +  ++  LCQ G +++A+ +  ++ E    V   +   L+HG C +G +D A+++F
Sbjct: 389 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 444



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 146/314 (46%), Gaps = 3/314 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A++    M
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E+ C   +  YNA+++    +     AL ++     L C PN +T++ L+ GL  + + 
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHAERL 469

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L  M Q+    N  T+ +++S  CQ    +EA  L  +M + GC+P+ + +N L
Sbjct: 470 DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 529

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G  K    +EAL LL      G      +YS ++D L R  R +EA      + +  +
Sbjct: 530 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 589

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P V +Y  ++  L +  +   A+   + M   G +P+   Y  LI+G    GLL +AR 
Sbjct: 590 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 649

Query: 365 LQVEIWKRDSLPNT 378
           +  E++ +  L  +
Sbjct: 650 VLSELYAKGVLSKS 663


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 268/550 (48%), Gaps = 44/550 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+   K    D  ++ LDE++   V +   +   LI G  + G  ++ALE F  M E
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK-----LNCLPNIVTFSLLINGLSKS 181
            +C P+V  YN V+N   +       L ++ +M K       C P+++++S +I+ L K+
Sbjct: 63  -ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + + A +    M   G  PN  TY+ +I GLC+++R DEAY L +++K     P  + Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NA++NGF +  +  E L LL   ++ GF   +  ++ ++  L++    ++A  ++ ++ +
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              +P+VV Y V + GL +AGKV +A ++L +M E  + PD   Y+++I GFC  G +D+
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +   +   + +P+  TF  L+ G   +    +A ++   M  AG  P +  +N L+D
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMD 361

Query: 422 GLCKAGELEKANLLFYKMEIGKN--------PTL--------------FLRLSQGGNRVH 459
            +C A  +E A  +++KM+  K         P +              FL + +  N V 
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           + A    +VE  C  G + +A  +L  + E                 CK G  + A+++ 
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVI 465

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +++ LKG+RPD  TY  ++  L  +DR + A   F +M   GC P    Y  L+  +C  
Sbjct: 466 EQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSA 525

Query: 580 RKFSLAFSLW 589
                AF ++
Sbjct: 526 DMADDAFRIF 535



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 282/584 (48%), Gaps = 86/584 (14%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ +ING  K+G+ + A ++LDEM +RG+  +   ++ +I GLC+  R DEA   F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-----DGFVPRLGSYSCLIDGLFR 285
           +  CSP+ + YN ++NG CK  R+DE L L    EK      G  P + SYS +ID L +
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R D+AY ++++M      P+VV Y  +I GL +  +V +A  LL  ++   +VP    
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 346 YNALIKGFCDLGLLDQARSLQVE-------------------IWKRDSL----------- 375
           YNA++ GF   G   +   L +                    +WK D             
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 376 -----PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                PN  T+ + + G+C+ G VD+A ++  +M ++   P V  ++++IDG CKAG ++
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 431 KANLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           KA+ +F +M + +   +P  F+ L  G +  H K+                +A+++   +
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSE-HKKS---------------REAFRVHEDM 344

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +G +P + TYN L++  C   ++  AL+++ +++ K  +PD+ TY  LI  L R  R 
Sbjct: 345 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRV 404

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI--SGRDDESMK 605
           ++A      M  +   P+ A+  +L+   C++ +   A S+ L  + +I  +G  DE+++
Sbjct: 405 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSV-LDNVVEICKAGEPDEAVE 463

Query: 606 SIEEFLQKG---------EVENAIQGLLEMDFKLNDFQ----------LAPYTIWLIGLC 646
            IE+ + KG          V  ++ GL  +D  + +F+          L  YT+ +   C
Sbjct: 464 VIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEAC 523

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR--GYLDL 688
                 +A  IF  +V   A  TP +        C R  GY DL
Sbjct: 524 SADMADDAFRIFEAMV--AAGFTPQAQTMRTLSSCLRDAGYQDL 565



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 212/486 (43%), Gaps = 63/486 (12%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLP-FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           +++ ++E L + D +     A     P  +S +TV   + K +     + +F    KR R
Sbjct: 80  KANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF----KRMR 135

Query: 60  LRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
               A N    S++I  L K +  D  +  L +L+  ++   +  +  +++G+ + G   
Sbjct: 136 AVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPS 195

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           + LE    MKE     ++  +NA+L+  ++      A   +  ++K    PN+VT+++ +
Sbjct: 196 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 255

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL K+GK + A ++L EM +  + P+  TY+ +I G C+  R D+A  +F +M    C 
Sbjct: 256 HGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 315

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V +  LL+GF + ++  EA  +       GF+P L +Y+ L+D +  A   + A   
Sbjct: 316 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 375

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           Y KM  +K +PD   Y  +I+ L  A +V +A + L  M    +VP+    +AL++  C 
Sbjct: 376 YHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCK 435

Query: 356 LGLLDQARSL---QVEIWK----------------------------------------- 371
            G +D+A S+    VEI K                                         
Sbjct: 436 QGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDS 495

Query: 372 ----------RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
                     R   P   T+T+LI   C   M DDA ++F  M  AG  P       L  
Sbjct: 496 AIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSS 555

Query: 422 GLCKAG 427
            L  AG
Sbjct: 556 CLRDAG 561



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 198/432 (45%), Gaps = 56/432 (12%)

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y  +I G  +AG+V  A +LL +M+ERG+  D   ++ LI+G C  G +D+A   Q + 
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE-QFKS 59

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK-----AGCFPSVGMFNALIDGLC 424
              +  PN  T+  ++ G+C+   +D+  +LF+ MEK      GC P V  ++ +ID LC
Sbjct: 60  MGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 425 KAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KA  ++KA   F +M  +G  P +               +  ++++  C    + +AY +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVV--------------TYSSLIDGLCKVDRVDEAYSL 165

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           LMQL     +P  + YN+++NGF + G  +  L+L   ++ KG   + + +  +++ L +
Sbjct: 166 LMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWK 225

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
            D +E A + F ++ ++G  P+   Y   +   C+                         
Sbjct: 226 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCK------------------------- 260

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                     G+V+ A + LLEM        +  Y+  + G C+ G++ +A ++F+ ++ 
Sbjct: 261 ---------AGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 311

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD-NK 722
            + I  P + + L+HG  +      A  V    +  GFI   +  N L+  +  +     
Sbjct: 312 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 371

Query: 723 KVHAYHLLCRMK 734
            +  YH + R K
Sbjct: 372 ALEIYHKMKRKK 383



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 177/397 (44%), Gaps = 53/397 (13%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  +I GFC  G +DQA  L  E+ +R    +    + LI G+CR G +D+A + F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +  C P+V  +N +++GLCKA  +++   LF  ME                         
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDME------------------------- 95

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
                        K Y+     A  G  PD+I+Y+++I+  CK   ++ A + FK ++  
Sbjct: 96  -------------KRYE-----ASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 137

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G  P+ VTY +LI+GL +VDR ++A+ +  Q+      P    Y +++    R+ K S  
Sbjct: 138 GCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSEC 197

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQ---GLLEMDFKLNDFQLAPYTIW 641
             L L       G +     ++   L K  E E A Q    LL+   K N   +  Y + 
Sbjct: 198 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPN---VVTYNVA 254

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + GLC+ G+V EA  I   +VE K      +   +I G CK G +D A DVF   + +  
Sbjct: 255 VHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 314

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           I  P     LL    FS+  K   A+ +   M + G+
Sbjct: 315 IPHPVTFMTLLHG--FSEHKKSREAFRVHEDMVNAGF 349


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 244/492 (49%), Gaps = 19/492 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYN 137
           F+   + L+ +R  N       FFV+   Y K     KA+E F +M  EF C+P V  +N
Sbjct: 88  FNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFN 147

Query: 138 AVLNIAFRKQLFLLALAVYYEMV---KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           +VLN+  +      AL  Y  +V    +N LPN+++F+L+I  + K G  + AI++  EM
Sbjct: 148 SVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREM 207

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             R  +P+ +TY  ++ GLC+++R DEA  L  +M+  GC P    +N L+NG CK    
Sbjct: 208 PVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDF 267

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                L+ +    G VP   +Y+ LI GL    + D+A +   +M   K  P+ V YG +
Sbjct: 268 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTI 327

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL + G+  D  ++L  M ERG + + Y Y+ L+ G    G  ++A  L  E   +  
Sbjct: 328 INGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGC 387

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             NT  ++ L+ G+CR+   D+A K+ ++M   GC P+   F++L+ G  + G   KA  
Sbjct: 388 KLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKA-- 445

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
               +E+ K+ T         N   ++     ++   C  G + +A  +  ++  +G  P
Sbjct: 446 ----IEVWKDMTKI-------NCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRP 494

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFR 552
           D++ Y+S+I G C  G++  ALKL+ E+       +PD +TY  L N L +      A  
Sbjct: 495 DVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVD 554

Query: 553 IFGQMPQNGCTP 564
           +   M   GC P
Sbjct: 555 LLNSMLDRGCDP 566



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 227/458 (49%), Gaps = 47/458 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F ++I    K+G  + A+E F +M    C PD Y Y  +++   +      A+++  EM 
Sbjct: 184 FNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQ 243

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P+  TF++LINGL K G      K++D M  +G +PN+ TY  +I GLC   + D
Sbjct: 244 IEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 303

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M  S C P+ V Y  ++NG  K  R  +   +L   E+ G++     YS L+
Sbjct: 304 KALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLV 363

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLF+  + +EA   +++  ++  + + VLY  ++ GL    K  +AMK+LS+M ++G  
Sbjct: 364 SGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCA 423

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+ + +++L+KGF ++G   +A  +  ++ K +   N   +++LI G+C++G V +A  +
Sbjct: 424 PNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMV 483

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           + KM   GC P V  ++++I GLC AG +E+A  L+ +M                     
Sbjct: 484 WAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEM--------------------- 522

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                      C                E  + PD+ITYN L N  CK  +I+ A+ L  
Sbjct: 523 ----------LCL---------------EPDSQPDVITYNILFNALCKQSSISRAVDLLN 557

Query: 521 ELQLKGLRPDSVTYGTLINGL-QRVDREEDAFRIFGQM 557
            +  +G  PD VT    +  L +++D  +D  +   ++
Sbjct: 558 SMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDEL 595



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 178/350 (50%), Gaps = 2/350 (0%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L K +  D     LDE++          F VLI+G  K GD  +  +    M    C P+
Sbjct: 226 LCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPN 285

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
              YN +++    K     AL++   MV   C+PN VT+  +INGL K G+     ++L 
Sbjct: 286 EVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV 345

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
            M +RG + N++ Y++++SGL +  +++EA RLF +  D GC  + V Y+AL++G C+ R
Sbjct: 346 LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDR 405

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           + DEA+ +L      G  P   ++S L+ G F      +A   ++ M +     + V Y 
Sbjct: 406 KPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYS 465

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI--W 370
           V+I GL + GKV +AM + + M   G  PD   Y+++I+G CD G +++A  L  E+   
Sbjct: 466 VLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCL 525

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           + DS P+  T+ IL   +C+   +  A  L N M   GC P +   N  +
Sbjct: 526 EPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL 575



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 218/471 (46%), Gaps = 57/471 (12%)

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM---RERGIVPDTYCYNALIK 351
           +YR  FE   +P V  +  ++  + +AG    A++  + +   ++  I+P+   +N +IK
Sbjct: 130 FYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIK 189

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C LGL+D A  L  E+  R  +P+ +T+  L+ G+C+   +D+A  L ++M+  GCFP
Sbjct: 190 SMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFP 249

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           S   FN LI+GLCK G+  +   L   M        FL+       V ++ +  T++   
Sbjct: 250 SPATFNVLINGLCKKGDFTRVTKLVDNM--------FLK-----GCVPNEVTYNTLIHGL 296

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + KA  +L ++  S  +P+ +TY ++ING  K G      ++   ++ +G   + 
Sbjct: 297 CLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNE 356

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             Y  L++GL +  + E+A R+F +    GC  +  +Y +L+   CR RK          
Sbjct: 357 YVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRK---------- 406

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENA------IQGLLEMDFKLNDFQL---------- 635
                    DE+MK + E   KG   NA      ++G  E+       ++          
Sbjct: 407 --------PDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCA 458

Query: 636 ---APYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                Y++ + GLC+DG+V EA+ +++ ++   C+  V   S   +I GLC  G ++ A+
Sbjct: 459 ENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYS--SMIQGLCDAGSVEEAL 516

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            ++   L      +P V  Y +      K +    A  LL  M   G D D
Sbjct: 517 KLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPD 567



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 228/522 (43%), Gaps = 64/522 (12%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK---IEPDVVLYGVMIRGLSEAGKVKDA 327
           P + S++ +++ + +A  +D A  +Y  +   K   I P+V+ + ++I+ + + G V +A
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           ++L  +M  R  VPD Y Y  L+ G C +  +D+A SL  E+      P+  TF +LI G
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+ G      KL + M   GC P+   +N LI GLC  G+L+KA  L  +M   K    
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKC--- 317

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                     V ++ +  T++      G      ++L+ + E G + +   Y+ L++G  
Sbjct: 318 ----------VPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLF 367

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G    A++LFKE   KG + ++V Y  L++GL R  + ++A +I  +M   GC P+  
Sbjct: 368 KEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAF 427

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            + SLM           A  +W + +  I+  ++E   S  I    + G+V  A+    +
Sbjct: 428 TFSSLMKGFFEVGNSHKAIEVW-KDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAK 486

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCK 682
           M        +  Y+  + GLC  G V+EAL +++ ++ C    + P  +    L + LCK
Sbjct: 487 MLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML-CLEPDSQPDVITYNILFNALCK 545

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL--------------------------- 715
           +  +  A+D+    L  G       CN  LR L                           
Sbjct: 546 QSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRN 605

Query: 716 --------------LFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
                         L  K +      H LC+ K +   +D C
Sbjct: 606 LGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVIDKC 647



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 157/371 (42%), Gaps = 55/371 (14%)

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           TF  LI     +   +  +K+ N+M       S   F  +     KA    KA  LFY+M
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA---YKILMQLAESGNLP 494
             E    PT+               S  +++     AG   +A   Y  ++   +   LP
Sbjct: 134 SFEFYCKPTV--------------KSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILP 179

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +++++N +I   CK+G ++ A++LF+E+ ++   PD+ TY TL++GL +VDR ++A  + 
Sbjct: 180 NVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLL 239

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M   GC PSPA +  L+   C++  F+    L                  ++    KG
Sbjct: 240 DEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKL------------------VDNMFLKG 281

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            V N +                 Y   + GLC  G++ +AL++   +V  K +    +  
Sbjct: 282 CVPNEVT----------------YNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYG 325

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            +I+GL K+G       V +   + G+I+   V + L+  L   K+ K   A  L     
Sbjct: 326 TIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLF--KEGKSEEAMRLFKESM 383

Query: 735 SVGYDLDACLY 745
             G  L+  LY
Sbjct: 384 DKGCKLNTVLY 394



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 2/181 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA++  L +    D   + L E+     +  +  F  L+ G+++VG+  KA+E +  M +
Sbjct: 395 SALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTK 454

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +C  +   Y+ +++   +    + A+ V+ +M+   C P++V +S +I GL  +G  E 
Sbjct: 455 INCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEE 514

Query: 187 AIKMLDEM--TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           A+K+ +EM   +    P+  TY I+ + LC+ +    A  L   M D GC PD V  N  
Sbjct: 515 ALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIF 574

Query: 245 L 245
           L
Sbjct: 575 L 575


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 175/629 (27%), Positives = 286/629 (45%), Gaps = 69/629 (10%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F +M     + D+  Y+ V+    R     LA A    +++       +TFS L+ 
Sbjct: 84  ALSLFNRMP----RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLK 139

Query: 177 GLSKSGKTEVAIKM-LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM----KD 231
           GL    +T  A+ + L  M   G  PN F+Y I++ GLC  NR+ +A  L   M      
Sbjct: 140 GLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC PD V+Y  ++NG  +  ++D+A  L       G  P   +Y+CL+ G   + +  E
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   +RKM  + +EPDVV Y  ++  L + G+  +A K+   M ++G  PD+  Y  L+ 
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+   G L Q   L   + +  + P+ + F ILI    ++GMVD+A   F+KM + G  P
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHP 379

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG--GNRVHDKAS--- 463
           ++  +  ++D LC+ G+++ A   F ++    +  N  +F  L  G       DKA    
Sbjct: 380 NIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELA 439

Query: 464 --------------LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                           T++   C  G++ +A  I   +       D+ITY +LI+G+C  
Sbjct: 440 VEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLD 499

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G ++ A KL + + L G++P+ VTY T+ING  +  R EDA  +F QM   G  P   +Y
Sbjct: 500 GKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIY 559

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            +++    + R+ + A  L+L                                +++   K
Sbjct: 560 STILHGLFQTRRIAAAKELYLW-------------------------------MIKCGIK 588

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           L    +  Y I L GLCQ+    +AL +F  L      +   +   +I  L K G  D A
Sbjct: 589 L---PIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEA 645

Query: 690 MDVFLYTLKNGFILRPRVCNY--LLRSLL 716
            D+F   L  G +  P V  Y  +++SL+
Sbjct: 646 KDLFASLLARGLV--PNVVTYWLMMKSLI 672



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 242/531 (45%), Gaps = 37/531 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFD----CQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           + +L+ G       ++AL     M   D    C PDV  Y  V+N   R+     A  ++
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF 229

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM+     PN +T++ L++G   SGK + AI +  +M + G+ P+  TY  ++  LC+ 
Sbjct: 230 DEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKN 289

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R+ EA ++F  M   G  PD   Y  LL+G+     + +   LL    ++G  P    +
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI    +    DEA   + KM ++ + P++V YG ++  L   GKV DAM     +  
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P+   +  LI G C     D+A  L VE+  R   PNT  F  L+  +C+ GMV  
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGG 455
           A+ +F+ M +      V  +  LIDG C  G++++A  L   M + G  P          
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKP---------- 519

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               ++ +  T++  YC  G I  A  +  Q+A  G  P I+ Y+++++G  +   I  A
Sbjct: 520 ----NEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +L+  +   G++    TY  ++ GL + +  +DA R+F     N C         L+ +
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMF----HNLC---------LIDF 622

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
             + R F++     L+      GR DE+       L +G V N +   L M
Sbjct: 623 HLQNRTFNIMIDALLK-----GGRHDEAKDLFASLLARGLVPNVVTYWLMM 668



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 229/510 (44%), Gaps = 15/510 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI+ LL+    D  +   DE+    +S     +  L+ GY   G  ++A+  F KM
Sbjct: 208 SYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKM 267

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                +PDV  YN ++    +    + A  V+  MVK    P+   +  L++G +  G  
Sbjct: 268 CRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYL 327

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
               ++LD M + G  P+ + + I+I    +    DEA   F KM+  G  P+ V Y  +
Sbjct: 328 VQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  C++ +VD+A++       +G  P    +  LI GL    ++D+A     +M    I
Sbjct: 388 MDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGI 447

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+ + +  ++  L + G V  A  +   M    +  D   Y  LI G+C  G +D+A  
Sbjct: 448 CPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATK 507

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +      PN  T+  +I G C+NG ++DA  LF +M   G  P + +++ ++ GL 
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLF 567

Query: 425 KAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           +   +  A  L+ + ++ G      ++L  G   +     LQ + +  CT   +   + +
Sbjct: 568 QTRRIAAAKELYLWMIKCG------IKLPIGTYNI----ILQGLCQNNCTDDALRMFHNL 617

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
            +      N     T+N +I+   K G  + A  LF  L  +GL P+ VTY  ++  L  
Sbjct: 618 CLIDFHLQNR----TFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 673

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
               E+   +F  + +NGCT    +  +L+
Sbjct: 674 QGLLEELDDLFLSLEKNGCTADSRMLNALV 703



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 41/379 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F +LI  Y K G  ++A+ +F KM++    P++  Y  V++   R      A++ +  +
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ---I 216
           +     PN V F  LI+GL    K + A ++  EM  RGI PN   +  +++ LC+   +
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            RA   + L +++ D  C  D + Y  L++G+C   +VDEA  LL     DG  P   +Y
Sbjct: 468 TRAKNIFDLMVRV-DVQC--DVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTY 524

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I+G  +  R ++A + +R+M  + + P +V+Y  ++ GL +  ++  A +L   M +
Sbjct: 525 NTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIK 584

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            GI      YN +++G C     D A  +   +   D      TF I+I  + + G  D+
Sbjct: 585 CGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDE 644

Query: 397 AQKLF-----------------------------------NKMEKAGCFPSVGMFNALID 421
           A+ LF                                     +EK GC     M NAL+ 
Sbjct: 645 AKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVG 704

Query: 422 GLCKAGELEKANLLFYKME 440
            L + GE+ KA +   K++
Sbjct: 705 KLPQKGEVRKAGVYLSKID 723


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 193/777 (24%), Positives = 346/777 (44%), Gaps = 45/777 (5%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTK---NPQVGFRFFIWAAK- 56
           + + L  V +IL   +      + L+P LS     SV    +   NP+    FF +A+  
Sbjct: 46  DHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDS 105

Query: 57  ---RKRLRSFAS--NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
              R  LRS+     S ++S  + P    L  + +D         +  +F    + + ++
Sbjct: 106 CGFRFTLRSYCVLMRSLIVSGFVSPARL-LLIRLIDR-------KLPVLFGDPKNRHIEI 157

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
                 L   G+        D+ I+  V    FR   F  A+ V+  +      P + T 
Sbjct: 158 ASAMADLNEVGESGVAVAAVDLLIH--VYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTC 215

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + L++ L K+ + E +  + + M Q G+ P+ + ++  I+  C+  + ++A +LF  M+ 
Sbjct: 216 TFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEK 274

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G SP+ V YN L++G CK   +DEA        KDG    L +YS LI+GL + ++++E
Sbjct: 275 LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNE 334

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A +  ++  E+   P+ V+Y  +I G  + G + DA+++  DM  +GI P++   N++I+
Sbjct: 335 ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQ 394

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           GFC +G ++QA  +  E+  R    N   FT +I  +C N   + A +   +M      P
Sbjct: 395 GFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRP 454

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM---EIGKN----PTLFLRLSQGGNR------- 457
           + G+   L+ GLCK G+   A  L++++     G N      L   L + GN        
Sbjct: 455 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 514

Query: 458 --------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                   V DK +  T++   C  G + + +K+  ++ + G  PD  TYN LI+G C++
Sbjct: 515 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 574

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G ++ A+ L+ E + + L P+  TYG +I+G  + D+ E+  ++F ++       +  VY
Sbjct: 575 GKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVY 634

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
            +L+   CR      AF L      + I          I      G +E+A   + EM  
Sbjct: 635 NTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK 694

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
           +     +  YT  + G C+ GQ+ + +N+   +          +   +I G  K G +  
Sbjct: 695 EGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKT 754

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           A  +    +  G +  P    Y + +  F K+ K    + +   M   G  LD   Y
Sbjct: 755 AAKLLHEMVGKGIV--PDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITY 809



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 286/630 (45%), Gaps = 99/630 (15%)

Query: 41  TKNPQVGFR----FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV 96
           T+   VGFR     F + A +    +  + + ++S L+K N  +  +   + +R G VS 
Sbjct: 186 TQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSP 244

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
              +F   I+ + K G  E A++ F  M++    P+V  YN +++   +      A    
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +MVK      ++T+S+LINGL K  K   A  +L E  ++G  PN+  Y  +I G C++
Sbjct: 305 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKM 364

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               +A R+   M   G +P+ V  N+++ GFCK+ ++++A  +L      GF    G++
Sbjct: 365 GNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAF 424

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD----------------------------- 307
           + +I  L    R++ A  + R+M    + P+                             
Sbjct: 425 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 484

Query: 308 ------VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                 +V    +I GL + G +++A++LL  M ERG V D   YN LI G C  G +++
Sbjct: 485 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 544

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
              L+ E+ K+   P+T T+ +LI GMCR G +D+A  L+N+ +     P+V  +  +ID
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604

Query: 422 GLCKAGELEKANLLFYKMEIGKN--------PTLFLRLSQGGNRV-----HD-------- 460
           G CKA ++E+   LF ++ + +N         TL     + GN V     HD        
Sbjct: 605 GYCKADKIEEGEKLFTEL-LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 663

Query: 461 --KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN----- 513
              A+  +++   C  G +  A  ++ ++ + G LP+++ Y +LI G+CK+G ++     
Sbjct: 664 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 723

Query: 514 ------------------------------GALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                                          A KL  E+  KG+ PD+VTY  L NG  +
Sbjct: 724 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             + E+ F+I   M Q G       Y +L+
Sbjct: 784 EGKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 250/526 (47%), Gaps = 22/526 (4%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  N    FRF     K     +  + S +I+ L+K   F+     L E      +    
Sbjct: 293 KHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEV 352

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI GY K+G+   AL   G M      P+    N+++    +      A  +  EM
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +      N   F+ +I+ L  + + E A++ L EM  R + PN    T ++ GLC+  + 
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  L+ ++ + G   + V  NAL++G CK   + EA+ LL+   + GFV    +Y+ L
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +  + +E +    +M ++ IEPD   Y ++I G+   GK+ +A+ L ++ + R +
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+ Y Y  +I G+C    +++   L  E+  ++   N+  +  LI   CRNG   +A K
Sbjct: 593 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK 652

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL---------FL 449
           L + M   G  P+   +++LI G+C  G +E A  L  +M + G  P +         + 
Sbjct: 653 LHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYC 712

Query: 450 RLSQGGNRVH------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +L Q    V+            +K +   M++ Y  +G +  A K+L ++   G +PD +
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           TYN L NGFCK G I    K+   +  +GL  D +TY TL++G Q+
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 245/489 (50%), Gaps = 48/489 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   ++   +  +  + KM+ F     VY    ++N      L  L  +V  ++ 
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+I+TF+ LINGL   G+   A++ LD +  RG  P  +T+T++++GLC+I +  
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A     KM +  C P+ V+Y+ +++  CK R V+EA+ L       G  P + +Y+ LI
Sbjct: 227 AAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLI 286

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G+  + ++ +A   +++M E  ++PDVV + +++  L + G V +A+ +   M +  + 
Sbjct: 287 YGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAME 346

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y++LI G C   L  ++ +L  E+  R+  P+  TF+I +   C+ GMV +AQ +
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N M + G  P+V  +N+L+DG C   ++++A  +F                        
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF------------------------ 442

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 MV + C                     PD+++YN LI G+CK   I+ A +LF 
Sbjct: 443 ----DIMVNKGCA--------------------PDVLSYNILIKGYCKSERIDEAKQLFD 478

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  KGL P+S+T+ TLI+GL +  R   A  +F +M  +GC P    Y +L++  C+  
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538

Query: 581 KFSLAFSLW 589
               A +L+
Sbjct: 539 HLDEALALF 547



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 266/542 (49%), Gaps = 47/542 (8%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA + +MV +N  P I  F+ L+  L +    +  + +  +M   G+  + +T TI+I+
Sbjct: 88  ALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILIN 147

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC ++     + +  K+   G  P  + +N L+NG C   R+ EA+  L      G+ P
Sbjct: 148 CLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQP 207

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ +++GL +  +   A  W +KM E   EP+VV Y ++I  L +   V +A+ L 
Sbjct: 208 TVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLF 267

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             MR  GI P    YN+LI G C+ G   QA  L  E+ + +  P+  TF+IL+  +C+ 
Sbjct: 268 YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKE 327

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G+V +A  +F KM +    P +  +++LI G+CK+   ++++ L  +M           L
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM-----------L 376

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+  N   D  +    V+ +C  G++ +A  I+  + E G  P+++TYNSL++G+C    
Sbjct: 377 SR--NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ 434

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A K+F  +  KG  PD ++Y  LI G  + +R ++A ++F +M   G TP+   + +
Sbjct: 435 MDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTT 494

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L++  C+                  +GR   + +  ++    G   + I           
Sbjct: 495 LISGLCQ------------------AGRPYAAKELFKKMGSHGCPPDLIT---------- 526

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 Y+  L G C+ G + EAL +F  L + +       C  L+ G+CK G L+ A +
Sbjct: 527 ------YSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580

Query: 692 VF 693
           +F
Sbjct: 581 LF 582



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 201/428 (46%), Gaps = 48/428 (11%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++++G  K+G    A+    KM E DC+P+V  Y+ +++   + +L   A+ ++Y M  +
Sbjct: 214 MIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI 273

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P +VT++ LI G+  SG+ + A  +  EM +  + P+  T++I++  LC+     EA
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEA 333

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F KM      PD V Y++L++G CK     E+  LL         P + ++S  +D 
Sbjct: 334 LSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +     EA +    M E  + P+VV Y  ++ G     ++ +A K+   M  +G  PD
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LIKG+C    +D+A+ L  E+  +   PN+ T T LI G+C+ G    A++LF 
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFK 513

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           KM   GC P +  ++ L+ G CK G L++A  LF  ++                    K+
Sbjct: 514 KMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK--------------------KS 553

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            L+                            P+ +    L+ G CK G +  A +LF  L
Sbjct: 554 QLK----------------------------PNHVICKILLGGMCKAGKLEDAKELFSSL 585

Query: 523 QLKGLRPD 530
            ++ L+PD
Sbjct: 586 SIEELQPD 593



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 180/412 (43%), Gaps = 26/412 (6%)

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           +D+A A++ +M      P +  +  ++  L         + +   M   G+    Y    
Sbjct: 85  FDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTI 144

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI   C L L+    S+  +I+K    P+  TF  LI G+C  G + +A +  + +   G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P+V     +++GLCK G+   A +   KM E+   P +               S   +
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEV--------------VSYSII 250

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C   L+++A  +   +   G  P ++TYNSLI G C  G    A  LFKE+    +
Sbjct: 251 IDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNM 310

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +PD VT+  L++ L +     +A  +FG+M Q    P    Y SL+   C+   +  + +
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESST 370

Query: 588 LWLQYL-RDISGRDDESMKSI--EEFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIW 641
           L  + L R+I  R D    SI  + F +KG   E ++ I  ++E   + N   +  Y   
Sbjct: 371 LLNEMLSRNI--RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPN---VVTYNSL 425

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           + G C   Q+ EA  +F ++V         S   LI G CK   +D A  +F
Sbjct: 426 MDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K    D   Q  DE+    ++  S     LISG  + G    A E F KM    C PD+ 
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y+ +L+   +      ALA++  + K    PN V   +L+ G+ K+GK E A ++   +
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585

Query: 195 TQRGILPN 202
           +   + P+
Sbjct: 586 SIEELQPD 593


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/631 (24%), Positives = 301/631 (47%), Gaps = 16/631 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +V   +  L   G++ +    PD + Y+ +       ++   A  ++ EM
Sbjct: 158 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK-AHCLFLEM 216

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++   LP I+  + +I  L K  + + A  ++ +M   GI P+ FTY+++I GLC+    
Sbjct: 217 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 276

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R+  +M ++G  P+ + YN+L++G+      +E++ + +     G +P + + +  
Sbjct: 277 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 336

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRER 337
           I  LF+  R +EA   +  M  +  +PD++ Y  M+ G + A    + D   + + M  +
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI P+ + +N LI  +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DDA
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
              FN M   G  PS  ++  LI G C  GEL KA  L  +M     P   ++       
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY------ 510

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                   +++   C  G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A  
Sbjct: 511 ------FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 564

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +   G+ P+   YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++    
Sbjct: 565 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 624

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLA 636
           + R+ + A  ++ + +   +     +   +   L +    +    LLE  F +N  F + 
Sbjct: 625 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 684

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            + I +  + + G+ +EA  +F  +     +    +   +I  L K    + A ++F+  
Sbjct: 685 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 744

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            K+G     R+ N+++R LL   +  K   Y
Sbjct: 745 EKSGHASDSRLLNHIVRMLLNKAEVAKASNY 775



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 3/346 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +IS   ++G  + AL  F  M +    P   +Y  ++         + A  +  EM
Sbjct: 439 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 498

Query: 160 VKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           +  +  P  +  FS +IN L K G+      ++D M Q G  PN  T+  ++ G C +  
Sbjct: 499 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 558

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +EA+ L   M   G  P+   Y  L++G+CK  R+D+AL + R     G  P    YS 
Sbjct: 559 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 618

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++ GLF+A+R   A   + +M E      +  YGV++ GL       +A  LL  +    
Sbjct: 619 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 678

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  D   +N +I     +G   +A+ L   I     +PN  T++++I  + +    ++A 
Sbjct: 679 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 738

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
            LF  +EK+G      + N ++  L    E+ KA+   Y   IG+N
Sbjct: 739 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS--NYLSIIGEN 782



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 89/185 (48%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +Y+ +L+  F+
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +++EM++     +I T+ +++ GL ++  T+ A  +L+++    +  +  T
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + IVIS + ++ R  EA  LF  +   G  P+   Y+ ++    K    +EA  L  S E
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745

Query: 266 KDGFV 270
           K G  
Sbjct: 746 KSGHA 750


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 259/545 (47%), Gaps = 45/545 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +L+  N   +      E+ S  V      F V++     V + + A    
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLL 231

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  +Y  +++   ++     AL +  EM  + CLP++ TF+ +I GL + 
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRL 291

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL---------------- 225
            +     K++D M  RG  PN  TY ++++GLC++ + DEA  L                
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILI 351

Query: 226 ----------------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                           + KM  +GC PD   +N L++G CK   +  A+ ++     +G 
Sbjct: 352 NGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGC 411

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P L +Y+ L+DG  +  + +EA     +M  +  E +++ Y V++R L + GKV  A+ 
Sbjct: 412 TPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALD 471

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L +M ++G  PD + +N LI G C +   + A +L  ++     + NT T+  LI    
Sbjct: 472 MLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFL 531

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A KL N M   GC      +N LI   CK G  EKA  LF +M         +
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM---------V 582

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R     + V    S   ++   C  G +  A ++L  +   G  PD++TYNSLING CK+
Sbjct: 583 R----KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GNI  A  LF +LQ +G++PD++TY TLI    R    +DA+ +  +  +N   P+   +
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698

Query: 570 KSLMT 574
             L++
Sbjct: 699 YILVS 703



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/617 (28%), Positives = 286/617 (46%), Gaps = 42/617 (6%)

Query: 107 GYYKVGDCEKAL-ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-- 163
           GY    D    L +  G  KEF     + +      IAFR+ LF+  +  YY    L   
Sbjct: 97  GYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMK-YYGRANLPGQ 155

Query: 164 -------------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
                        C P   +++++++ L  +    VA  +  EM  +G++P  +T+ +V+
Sbjct: 156 ATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVM 215

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC +N  D A  L   M   GC P+ V Y  L++   K  RV+EAL LL      G +
Sbjct: 216 KALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCL 275

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +++ +I GL R  R  E      +M      P+ + YGV++ GL   GKV +A  L
Sbjct: 276 PDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVL 335

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS-LQVEIWKRDSLPNTHTFTILICGMC 389
           L+ +      P+   +  LI G+   G LD+A + L  ++ K    P+  TF  LI G+C
Sbjct: 336 LNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLC 391

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G++  A  + N M   GC P++  +  L+DG CK  +LE+A  +  +M          
Sbjct: 392 KKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG-----F 446

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L+  G  V        ++   C  G + KA  +L ++++ G  PDI T+N+LI G CKV
Sbjct: 447 ELNIMGYNV--------LLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKV 498

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
                AL L++++ L G+  ++VTY TLI+   R    ++A ++   M   GC      Y
Sbjct: 499 DRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITY 558

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
             L+   C+      A  L+ + +R D+   +      I    + G+V NA++ L +M  
Sbjct: 559 NGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIH 618

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGY 685
           +     +  Y   + GLC+ G ++EA N+F+ L   +A    P  +    LI   C+ G 
Sbjct: 619 RGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL---QAEGIQPDAITYNTLICWHCRAGM 675

Query: 686 LDLAMDVFLYTLKNGFI 702
            D A  + L  ++N FI
Sbjct: 676 FDDAYLLLLRGVENAFI 692



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 218/415 (52%), Gaps = 21/415 (5%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE-MVK 161
           VL++G  +VG  ++A     K+      P+   +  ++N   +      A A  Y+ M+K
Sbjct: 318 VLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKMIK 373

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
             C P++ TF+ LI+GL K G    A+ M+++M+  G  PN  TYT ++ G C+ N+ +E
Sbjct: 374 NGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEE 433

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  +  +M   G   + + YN LL   CK  +V +AL +L      G  P + +++ LI 
Sbjct: 434 AGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIF 493

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +  R ++A A YR M  + +  + V Y  +I      G +++A+KL++DM  RG   
Sbjct: 494 GLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPL 553

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   YN LIK FC LG  ++A  L  E+ ++D +P+  +  +LI G+CR G V +A +L 
Sbjct: 554 DEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELL 613

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD 460
             M   G  P V  +N+LI+GLCK G + +A  LF K++  G  P              D
Sbjct: 614 RDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQP--------------D 659

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK-VGNING 514
             +  T++  +C AG+   AY +L++  E+  +P+ +T+  L++ F K +G  NG
Sbjct: 660 AITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGKENG 714


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/618 (24%), Positives = 297/618 (48%), Gaps = 19/618 (3%)

Query: 117 ALESFGKMKEFDC------QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           A+E F +M  + C       P +Y YN +++   R     LALAV+  +++    P++ +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI+G SK G+ + A ++  +M ++ + P+  TY  +I GLC+     ++ R+  +M 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D+G  P+   YN+L+ G+       E++ + +     G +P + + +  I  L R  R  
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA   +  M  +  +P+++ Y  ++ G +  G   +   L++ M  +GIVP+   +N LI
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DDA   FN M   G  
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           PS  ++  LI G C  GEL KA  L  +M     P   ++               +++  
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY------------FSSIINN 447

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
               G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A  L   +   G+ P+
Sbjct: 448 LFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 507

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
              YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++    + R+ + A  ++ 
Sbjct: 508 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFH 567

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDG 649
           + +   +    ++   +   L +    +    LLE  F +N  F +  + I +  + + G
Sbjct: 568 EMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVG 627

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           + +EA  +F+ +     + T  +   +I  L K    + A ++F+   K+G     R+ N
Sbjct: 628 RRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLN 687

Query: 710 YLLRSLLFSKDNKKVHAY 727
           +++R LL   +  K   Y
Sbjct: 688 HIVRMLLKKAEVAKASNY 705



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/600 (25%), Positives = 270/600 (45%), Gaps = 60/600 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G+ K G+ +KA E F KM E    PDV  YN++++   + +  + +  V  +MV
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                PN  T++ LI G S +G  + ++++  EM+  G++P        I  LC+ NR  
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F  M   G  P+ ++Y+ LL+G+          +L+      G VP    ++ LI
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   R    D+A   +  M  + + PD V +  +I  L   G++ DA+   + M + G+ 
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGMVDDAQK 399
           P    Y  LI+G C+ G L +A+ L  E+  +D   P    F+ +I  + + G V + + 
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKD 459

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           + + M + G  P+V  FN+L++G C  G +E+A  L   M  IG  P  ++         
Sbjct: 460 IMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI--------- 510

Query: 459 HDKASLQTMVEQYCTAG-----------LIHK------------------------AYKI 483
                  T+V+ YC  G           ++HK                        A K+
Sbjct: 511 -----YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKM 565

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ ESG    I TY  ++ G C+    + A  L ++L    ++ D +T+  +I+ + +
Sbjct: 566 FHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLK 625

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           V R ++A  +F  +   G  P+   Y  +++   +   +  A +L++   +  SGR  +S
Sbjct: 626 VGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEK--SGRAPDS 683

Query: 604 M---KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG--LCQDGQVKEALNIF 658
                 +   L+K EV  A   L  +D   N+  L   TI L+     ++G+ +E + + 
Sbjct: 684 RLLNHIVRMLLKKAEVAKASNYLSIID--ENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 225/485 (46%), Gaps = 20/485 (4%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L+++    +   +  +  LI GY   G  ++++  F +M      P V   N+ ++  
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            R      A  ++  MV     PNI+++S L++G +  G       +++ M  +GI+PN 
Sbjct: 273 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 332

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             + I+I+   +    D+A  +F  M++ G  PD V +  +++  C++ R+D+AL     
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY-GVMIRGLSEAG 322
               G  P    Y CLI G        +A     +M  + I P  V Y   +I  L + G
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +V +   ++  M + G  P+   +N+L++G+C +G +++A +L   +      PN + + 
Sbjct: 453 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 512

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            L+ G C+NG +DDA  +F  M   G  P+  ++N ++ GL +A     A  +F++M   
Sbjct: 513 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM--- 569

Query: 443 KNPTLFLRLSQGGNRVHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                     + G  V    S+QT   ++   C      +A  +L +L       DIIT+
Sbjct: 570 ---------IESGTTV----SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 616

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +I+   KVG    A +LF  +   GL P   TY  +I+ L + +  E+A  +F  + +
Sbjct: 617 NIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEK 676

Query: 560 NGCTP 564
           +G  P
Sbjct: 677 SGRAP 681



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 35/232 (15%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +YN +L+ 
Sbjct: 493 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHG 552

Query: 143 AFRKQLFLLALAVYYEMVK-----------------------------------LNCLPN 167
            F+ +    A  +++EM++                                   +N   +
Sbjct: 553 LFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 612

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           I+TF+++I+ + K G+ + A ++   ++  G++P   TY ++IS L +    +EA  LF+
Sbjct: 613 IITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFI 672

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            ++ SG +PD    N ++    K   V +A   L   +++       + S L
Sbjct: 673 SVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLL 724


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 238/473 (50%), Gaps = 13/473 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A E +  M E   +P V  YN +L+   ++     AL +  +M K+ CLPN VT+++L+N
Sbjct: 174 AREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVN 233

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GLS SG+ E A +++ EM + G+  + +TY  +I G C+  + DEA RL  +M   G  P
Sbjct: 234 GLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVP 293

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             V YN ++ G CK  RV +A  LL        +P L SY+ LI G  R     EA+  +
Sbjct: 294 TLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLF 353

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            ++    + P VV Y  +I GL   G +  AM+L  +M + G  PD + +  L++GFC L
Sbjct: 354 AELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKL 413

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L  A+ L  E+  R   P+   +   I G  + G    A  +  +M   G  P +  +
Sbjct: 414 GNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITY 473

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N  IDGL K G L++A+ L  KM           L  G   V D  +  +++  +  AG 
Sbjct: 474 NVFIDGLHKLGNLKEASELVKKM-----------LYNG--LVPDHVTYTSIIHAHLMAGH 520

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA  + +++   G  P ++TY  LI+ +   G +  A+  F E+  KG+ P+ +TY  
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 580

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           LINGL +V + + A++ F +M   G +P+   Y  L+  +C    +  A  L+
Sbjct: 581 LINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 633



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 164/325 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI GY ++G+  +A   F +++     P V  YN +++   R     +A+ +  EM+
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P++ TF++L+ G  K G   +A ++ DEM  RG+ P++F Y   I G  ++    
Sbjct: 393 KHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 452

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ +  +M   G  PD + YN  ++G  KL  + EA  L++    +G VP   +Y+ +I
Sbjct: 453 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 512

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                A    +A A + +M  + I P VV Y V+I   +  G++K A+    +M E+G+ 
Sbjct: 513 HAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH 572

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YNALI G C +  +DQA     E+  +   PN +T+TILI   C  G   +A +L
Sbjct: 573 PNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRL 632

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCK 425
           +  M      P     +AL+  L K
Sbjct: 633 YKDMLDREIQPDSCTHSALLKHLNK 657



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 208/442 (47%), Gaps = 29/442 (6%)

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD-AMKLLSDMRERGIVPDTYCYNALIKGFC 354
           + KM  + + PD+     ++R L +     D A ++ + M E GI P    YN ++  FC
Sbjct: 142 FYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFC 201

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  L +++ K   LPN  T+ +L+ G+  +G ++ A++L  +M + G   S  
Sbjct: 202 KQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAY 261

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            ++ LI G C+ G+L++A+ L  +M   G  PTL               +  T++   C 
Sbjct: 262 TYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTL--------------VTYNTIMYGLCK 307

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A K+L  +     +PD+++YN+LI G+ ++GNI  A  LF EL+ +GL P  VT
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TLI+GL R+   + A R+  +M ++G  P    +  L+   C+     +A  L+ + L
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427

Query: 594 -RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            R +       +  I   L+ G+   A     EM  +     L  Y +++ GL + G +K
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  +   ++    +    +   +IH     G+L  A  VFL  L  G    P V  Y +
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF--PSVVTYTV 545

Query: 713 RSLLFSKDNKKVHAYHLLCRMK 734
                      +H+Y +  R+K
Sbjct: 546 L----------IHSYAVRGRLK 557



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 25/289 (8%)

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC-KVGNINGALKLFKELQLKGLRP 529
           Y    ++ K   +  ++   G LPD+   N ++     +  +I+ A +++  +   G+RP
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             VTY T+++   +  + ++A ++  QM + GC P+   Y  L+       +   A  L 
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELI 248

Query: 590 LQYLR---DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            + LR   ++S    + +  I  + +KG+++ A +   EM  +     L  Y   + GLC
Sbjct: 249 QEMLRLGLEVSAYTYDPL--IRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G+V +A  +  V+V    +    S   LI+G  + G +  A  +F      G +  P 
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV--PS 364

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGP 755
           V  Y          N  +     LCRM     DLD  +  K + +  GP
Sbjct: 365 VVTY----------NTLIDG---LCRMG----DLDVAMRLKDEMIKHGP 396


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 200/764 (26%), Positives = 327/764 (42%), Gaps = 124/764 (16%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIM----KTKNPQVGFRFFIWAAKRKRL 60
           + +++ IL T    E +LE       +T V+ +      + ++P +G + F WA+KR   
Sbjct: 35  VKDIIQILSTHPHWEKSLETRFSD-CETPVSGIAHFVFDRIRDPGLGLKLFEWASKRSDF 93

Query: 61  RSFA---SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
                  S S+++ +L +   F      L+ ++  +++   +    ++  Y   G   +A
Sbjct: 94  NDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRA 153

Query: 118 LESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN------------- 163
           LE +    +  +  PDV   NA+LN   +++   +A  VY EMVK +             
Sbjct: 154 LELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVR 213

Query: 164 ----------------------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                                 C+PNIV ++ L++G  K G  E A  +  E+  +G LP
Sbjct: 214 GLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLP 273

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKD------------------------------ 231
              TY I+I+GLC+         L ++MK+                              
Sbjct: 274 TTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTL 333

Query: 232 -----SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
                +GC PD   YN L++G C+  +V EA  LL    K G  P   SY+ LI    + 
Sbjct: 334 RWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQ 393

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            +   A+  +  M E+    D+V YG ++ GL  AG+V  A+ +   M ERG++PD   Y
Sbjct: 394 GKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVY 453

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N L+ G C  G L  A+ L VE+  ++   +      L+ G  R+G +D+A+KLF     
Sbjct: 454 NVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIA 513

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P V  +NA+I G CK G +  A     +M             + G+   D+ +  T
Sbjct: 514 KGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRM-------------KDGDHSPDEFTYST 560

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++ Y     +H A K+  Q+ +    P+++TY SLINGFC+ G+ + A K F+E++  G
Sbjct: 561 IIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSG 620

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L+P+ VTY  LI    +  +   A   F  M  N C P+   +  L+             
Sbjct: 621 LKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLIN------------ 668

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF---KLNDF---QLAPYTI 640
            L       +S + +ES++              I+  L MDF    ++D    ++A Y  
Sbjct: 669 GLTNNLATAVSNKANESLE--------------IKASLMMDFFRTMISDGWEQRVAAYNS 714

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
            LI LC    V  AL +   +        P S   L++GLC  G
Sbjct: 715 VLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEG 758



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 165/407 (40%), Gaps = 85/407 (20%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFN-KMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +D  P     + ++     +G+V+ A +L++   +     P V   NAL++ L +  ++E
Sbjct: 128 KDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVE 187

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  ++ +M           + + G    D  S+  MV   C    + +  K++      
Sbjct: 188 IARKVYEEM-----------VKRDG--CWDNYSVCIMVRGLCKERKVEEGRKLINDRWGK 234

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR------- 543
           G +P+I+ YN+L++G+ K G++  A  LFKEL++KG  P + TYG +INGL +       
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294

Query: 544 ----VDREEDAFRIFGQ------------------------MPQNGCTPSPAVYKSLMTW 575
               V+ +E    +  Q                        + +NGC P    Y +L++ 
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           SCR                   G+  E+ + +E  +++G   N +               
Sbjct: 355 SCR------------------DGKVHEAEELLEHAIKRGLSPNKLS-------------- 382

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  +   C+ G+   A ++F  + E    +   +   L+HGL   G +D+A+ V   
Sbjct: 383 --YTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDK 440

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            ++ G +    V N L+  L   K  +   A  LL  M      LDA
Sbjct: 441 MVERGVLPDANVYNVLMNGL--CKKGRLSAAKLLLVEMLHQNLSLDA 485



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 51/240 (21%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           +T+    +K  +     + F    K+K   +  + +++I+   +        +T +E+RS
Sbjct: 559 STIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRS 618

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             +      + +LI  + K G   KA   F                              
Sbjct: 619 SGLKPNVVTYTILIGCFCKEGKISKACSFF------------------------------ 648

Query: 152 ALAVYYEMVKLN-CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
                 E++ LN C+PN VTF+ LINGL+ +  T V+ K  + +  +  L   F  T++ 
Sbjct: 649 ------ELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMIS 702

Query: 211 SG--------------LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G              LC     + A +L  KM   G  PD V++ AL+ G C   R  E
Sbjct: 703 DGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/631 (24%), Positives = 301/631 (47%), Gaps = 16/631 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +V   +  L   G++ +    PD + Y+ +       ++   A  ++ EM
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK-AHCLFLEM 236

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++   LP I+  + +I  L K  + + A  ++ +M   GI P+ FTY+++I GLC+    
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 296

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R+  +M ++G  P+ + YN+L++G+      +E++ + +     G +P + + +  
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRER 337
           I  LF+  R +EA   +  M  +  +PD++ Y  M+ G + A    + D   + + M  +
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI P+ + +N LI  +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DDA
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
              FN M   G  PS  ++  LI G C  GEL KA  L  +M     P   ++       
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY------ 530

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                   +++   C  G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A  
Sbjct: 531 ------FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 584

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +   G+ P+   YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++    
Sbjct: 585 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 644

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLA 636
           + R+ + A  ++ + +   +     +   +   L +    +    LLE  F +N  F + 
Sbjct: 645 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 704

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            + I +  + + G+ +EA  +F  +     +    +   +I  L K    + A ++F+  
Sbjct: 705 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 764

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            K+G     R+ N+++R LL   +  K   Y
Sbjct: 765 EKSGHASDSRLLNHIVRMLLNKAEVAKASNY 795



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/566 (22%), Positives = 252/566 (44%), Gaps = 23/566 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I G  K    +KA     +M E   +P+   YN++++      ++  ++ V+ +M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P +   +  I+ L K G+T  A  + D M  +G  P+  +Y+ ++ G      +
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401

Query: 220 --DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              + + +F  M   G +P+   +N L+N + +   +D+A+ +    +  G +P   +++
Sbjct: 402 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +I  L R  R D+A   +  M +  + P   +YG +I+G    G++  A +L+S+M  +
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 521

Query: 338 GIVPDTYCY-NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            I P    Y +++I   C  G + + + +   + +    PN  TF  L+ G C  G +++
Sbjct: 522 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 581

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A  L + M   G  P+  ++  L+DG CK G ++ A  +F  M   G  PT  L      
Sbjct: 582 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL------ 635

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                      ++     A     A K+  ++ ESG    I TY  ++ G C+    + A
Sbjct: 636 --------YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEA 687

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L ++L    ++ D +T+  +I+ + +V R ++A  +F  +   G  P+   Y  ++T 
Sbjct: 688 NMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 747

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             +   +  A +L++   +     D   +  I    L K EV  A   L  +    N+  
Sbjct: 748 LIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--ENNLT 805

Query: 635 LAPYTIWLIG--LCQDGQVKEALNIF 658
           L   TI L+     ++G+ +E + + 
Sbjct: 806 LEASTISLLASLFSREGKYREHIKLL 831



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 111/246 (45%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +Y+ +L+  F+
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +++EM++     +I T+ +++ GL ++  T+ A  +L+++    +  +  T
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + IVIS + ++ R  EA  LF  +   G  P+   Y+ ++    K    +EA  L  S E
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G        + ++  L       +A  +   + E  +  +     ++    S  GK +
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825

Query: 326 DAMKLL 331
           + +KLL
Sbjct: 826 EHIKLL 831


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            A +++ EM++   +P+IV F+ ++  ++K  K ++ I +  +M   GI  + +++TI+I 
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              C+ +R   A  L  KM   G  P  V   +LLNGFC+  R  EA++L+ S +  GFVP
Sbjct: 648  CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
             +  Y+ +I+GL + +  + A   +  M ++ I  D V Y  +I GLS +G+  DA +LL
Sbjct: 708  NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             DM +R I P+   + ALI  F   G L +AR+L  E+ +R  +PN  T+  LI G C +
Sbjct: 768  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 827

Query: 392  GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            G + DA+ +F+ M   GCFP V  +N LI G CK+  +E    LF +M            
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---------- 877

Query: 452  SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
             QG   V D  +  T++  YC AG ++ A K+  ++ + G  PDI+TYN L++  C  G 
Sbjct: 878  -QG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 934

Query: 512  INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            I  AL + ++LQ   +  D +TY  +I GL R D+ ++A+ +F  + + G  P    Y +
Sbjct: 935  IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 994

Query: 572  LMTWSCRR 579
            +++  CR+
Sbjct: 995  MISGLCRK 1002



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 233/456 (51%), Gaps = 15/456 (3%)

Query: 115  EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            + A   F +M +    P +  +  VL +  +   F + + +Y++M  L    ++ +F++L
Sbjct: 586  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 175  INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
            I+   +  +  +A+ +L +M + G  P+  T   +++G CQ NR  EA  L   M   G 
Sbjct: 646  IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 235  SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             P+ V YN ++NG CK R ++ AL +    EK G      +Y+ LI GL  + R+ +A  
Sbjct: 706  VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 295  WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              R M + KI+P+V+ +  +I    + G + +A  L  +M  R +VP+ + YN+LI GFC
Sbjct: 766  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 355  DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
              G L  A+ +   +  +   P+  T+  LI G C++  V+D  KLF +M   G      
Sbjct: 826  IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 415  MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N LI G C+AG+L  A  +F +M + G +P              D  +   +++  C 
Sbjct: 886  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP--------------DIVTYNILLDCLCN 931

Query: 474  AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
             G I KA  ++  L +S    DIITYN +I G C+   +  A  LF+ L  KG++PD++ 
Sbjct: 932  NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 991

Query: 534  YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            Y T+I+GL R   + +A ++  +M ++G  PS  +Y
Sbjct: 992  YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 216/428 (50%), Gaps = 15/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A+++EMV    LP+IV F+ L+   +   + E  I    +M   GI  + +++TI+I 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ +R   A  +  KM   G  P  V + +LL+GFC + R+ +A +L+    K G+ P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ LIDGL +    + A     +M ++ +  DVV Y  ++ GL  +G+  DA ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM +R I PD   + ALI  F   G LD+A+ L  E+ +    PN  T+  +I G+C +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G + DA+K F+ M   GCFP+V  +N LI G CK   +++   LF +M   G N  +F  
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF-- 352

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  T++  YC  G +  A  I   +      PDIIT+  L++G C  G
Sbjct: 353 ------------TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  AL  F +++        V Y  +I+GL + D+ E A+ +F ++P  G  P    Y 
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 571 SLMTWSCR 578
            ++   C+
Sbjct: 461 IMILGLCK 468



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 176/719 (24%), Positives = 301/719 (41%), Gaps = 82/719 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G  K G+   ALE   +M++     DV  YN +L        +  A  +  +M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K +  P++VTF+ LI+   K G  + A ++  EM Q  + PN  TY  +I+GLC   R 
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A + F  M   GC P+ V YN L++GFCK R VDE + L +    +GF   + +Y+ L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +  +   A   +  M   ++ PD++ + +++ GL   G+++ A+    DMRE   
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
                 YN +I G C    +++A  L   +      P+  T+TI+I G+C+NG   +A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAG--------------ELEKANLLFYK------- 438
           L  +M++ G    +   NA  D L +                E  K+N  + +       
Sbjct: 478 LIRRMKEEGI---ICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAF 534

Query: 439 --------------MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
                         +E G NP   L  S  G   H     +   E +C       A+ + 
Sbjct: 535 SSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIK--FDDAFSLF 592

Query: 485 MQLAESGNLPDII-----------------------------------TYNSLINGFCKV 509
            ++ +S  +P I+                                   ++  LI+ FC+ 
Sbjct: 593 CEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRC 652

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             ++ AL L  ++   G RP  VT G+L+NG  + +R ++A  +   M   G  P+  +Y
Sbjct: 653 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 712

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLEM 626
            +++   C+ R  + A  ++  Y  +  G   +++     I      G   +A + L +M
Sbjct: 713 NTVINGLCKNRDLNNALEVF--YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 770

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             +  D  +  +T  +    ++G + EA N++  ++    +    +   LI+G C  G L
Sbjct: 771 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             A  +F   +  G    P V  Y      F K  +      L C M   G   DA  Y
Sbjct: 831 GDAKYMFDLMVSKGCF--PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 13/405 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM+ +    D+Y +  +++   R      AL+V  +M+KL   P+IVTF  L++G     
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           +   A  ++  M + G  PN   Y  +I GLC+    + A  L  +M+  G   D V YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LL G C   R  +A  +LR   K    P + +++ LID   +    DEA   Y++M + 
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            ++P+ V Y  +I GL   G++ DA K    M  +G  P+   YN LI GFC   ++D+ 
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L   +       +  T+  LI G C+ G +  A  +F  M      P +     L+ G
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  GE+E A + F  M             +   +     +   M+   C A  + KA++
Sbjct: 396 LCVNGEIESALVKFDDM-------------RESEKYIGIVAYNIMIHGLCKADKVEKAWE 442

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +L   G  PD  TY  +I G CK G    A +L + ++ +G+
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 224/509 (44%), Gaps = 47/509 (9%)

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D+A+ LF +M  S   P  V +  +L    K+ + D  + L    E  G    L S++ L
Sbjct: 586  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I    R  R   A A   KM +    P +V  G ++ G  +  + ++A+ L+  M   G 
Sbjct: 646  IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            VP+   YN +I G C    L+ A  +   + K+    +  T+  LI G+  +G   DA +
Sbjct: 706  VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            L   M K    P+V  F ALID   K G L +A  L+ +M         +R S     V 
Sbjct: 766  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM---------IRRSV----VP 812

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            +  +  +++  +C  G +  A  +   +   G  PD++TYN+LI GFCK   +   +KLF
Sbjct: 813  NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 872

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             E+  +GL  D+ TY TLI+G  +  +   A ++F +M   G +P    Y  L+   C  
Sbjct: 873  CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN- 931

Query: 580  RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                             +G+ ++++  +E+ LQK E+               D  +  Y 
Sbjct: 932  -----------------NGKIEKALVMVED-LQKSEM---------------DVDIITYN 958

Query: 640  IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
            I + GLC+  ++KEA  +F  L          + + +I GLC++G    A  +     ++
Sbjct: 959  IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 1018

Query: 700  GFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
            GF+   R+ +  LR    S   + + A H
Sbjct: 1019 GFMPSERIYDETLRDHYTSLSAELIKAAH 1047



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 191/392 (48%), Gaps = 15/392 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  + +      AL   GKM +   +P +  + ++L+          A ++   MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    PN+V ++ LI+GL K+G+  +A+++L+EM ++G+  +  TY  +++GLC   R  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+   M     +PD V + AL++ F K   +DEA  L +   +    P   +Y+ +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL    R  +A   +  M  +   P+VV Y  +I G  +   V + MKL   M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D + YN LI G+C +G L  A  +   +  R   P+  T  IL+ G+C NG ++ A   
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
           F+ M ++  +  +  +N +I GLCKA ++EKA  LF ++ + G  P              
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP-------------- 454

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           D  +   M+   C  G   +A +++ ++ E G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 213/455 (46%), Gaps = 15/455 (3%)

Query: 47   GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
             F  F    + + + S    + V++++ K N FD+      ++ +  +S     F +LI 
Sbjct: 588  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 647

Query: 107  GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
             + +      AL   GKM +   +P +    ++LN   +   F  A+++   M     +P
Sbjct: 648  CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 707

Query: 167  NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
            N+V ++ +INGL K+     A+++   M ++GI  +  TY  +ISGL    R  +A RL 
Sbjct: 708  NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 767

Query: 227  LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
              M      P+ + + AL++ F K   + EA  L +   +   VP + +Y+ LI+G    
Sbjct: 768  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 827

Query: 287  KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
                +A   +  M  +   PDVV Y  +I G  ++ +V+D MKL  +M  +G+V D + Y
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 347  NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            N LI G+C  G L+ A+ +   +      P+  T+ IL+  +C NG ++ A  +   ++K
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947

Query: 407  AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            +     +  +N +I GLC+  +L++A  LF  +   G  P              D  +  
Sbjct: 948  SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP--------------DAIAYI 993

Query: 466  TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            TM+   C  GL  +A K+  ++ E G +P    Y+
Sbjct: 994  TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 214/457 (46%), Gaps = 16/457 (3%)

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G   + R+++A+A + +M   +  P +V +  ++   +   + +  +     M   GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D Y +  LI  FC    L  A S+  ++ K    P+  TF  L+ G C    + DA  L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
             M K+G  P+V ++N LIDGLCK GEL  A  L  +ME         +   G     D 
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME---------KKGLGA----DV 211

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++   C +G    A ++L  + +    PD++T+ +LI+ F K GN++ A +L+KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +    + P++VTY ++INGL    R  DA + F  M   GC P+   Y +L++  C+ R 
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
                 L+ +   +    D  +  + I  + Q G++  A+     M  +     +  + I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L GLC +G+++ AL  F  + E +  +   +   +IHGLCK   ++ A ++F      G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
             ++P    Y +  L   K+  +  A  L+ RMK  G
Sbjct: 452 --VKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 8/271 (2%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            F  LI  + K G+  +A   + +M      P+V+ YN+++N          A  ++  MV
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               C P++VT++ LI G  KS + E  +K+  EMT +G++ + FTY  +I G CQ  + +
Sbjct: 842  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 221  EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
             A ++F +M D G SPD V YN LL+  C   ++++AL ++   +K      + +Y+ +I
Sbjct: 902  VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 281  DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             GL R  +  EA+  +R +  + ++PD + Y  MI GL   G  ++A KL   M+E G +
Sbjct: 962  QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 1021

Query: 341  PDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            P    Y        D  L D   SL  E+ K
Sbjct: 1022 PSERIY--------DETLRDHYTSLSAELIK 1044



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 70/459 (15%)

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +  SD RE+           L  GF      + A +L  E+     LP+   FT L+ 
Sbjct: 31  AARAFSDYREK-----------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLT 79

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP 445
                   +       KME  G    +  F  LI   C+   L  A ++L   M++G  P
Sbjct: 80  ATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP 139

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               +  +++  +C    I  A+ +++ + +SG  P+++ YN+LI+G
Sbjct: 140 SI--------------VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK G +N AL+L  E++ KGL  D VTY TL+ GL    R  DA R+   M +    P 
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIE 608
              + +L+    ++     A  L+ + ++                  + GR  ++ K+ +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 609 EFLQKGEVENA------IQGLLE---MDFKLNDFQ----------LAPYTIWLIGLCQDG 649
               KG   N       I G  +   +D  +  FQ          +  Y   + G CQ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 650 QVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +++ AL+IF  +V  +  VTP     C+ L+HGLC  G ++ A+  F    ++   +   
Sbjct: 366 KLRVALDIFCWMVSRR--VTPDIITHCI-LLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N ++  L   K +K   A+ L CR+   G   DA  Y
Sbjct: 423 AYNIMIHGL--CKADKVEKAWELFCRLPVEGVKPDARTY 459


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 245/511 (47%), Gaps = 27/511 (5%)

Query: 90  RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           RSG      DVF    L++GY + G  + A      M      PD Y Y  ++     + 
Sbjct: 106 RSG---TAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRG 159

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL++  +M+   C P++VT+++L+  + KS     A+++LDEM  +G  PN  TY 
Sbjct: 160 RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYN 219

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I+G+C+  R D+A     ++   G  PD V+Y  +L G C  +R ++   L     + 
Sbjct: 220 VIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             +P   ++  L+    R    + A     +M       +  L  ++I  + + G+V DA
Sbjct: 280 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            + L++M   G  PDT  Y  ++KG C     + A+ L  E+ +++  PN  TF   IC 
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+ G+++ A  L  +M + GC  ++  +NAL++G C  G ++ A  LFY M    N   
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT 459

Query: 448 FLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLA 488
           +  L  G     R+   A L                  +V  +C  GL+ +A +++ Q+ 
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G  P++ITYN+L++G     N   AL+L   L   G+ PD VTY ++I  L R DR E
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVE 579

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +A ++F  +   G  P   +Y  ++   C+R
Sbjct: 580 EAIKMFHIVQDLGMRPKAVIYNKILLALCKR 610



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 157/578 (27%), Positives = 271/578 (46%), Gaps = 69/578 (11%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++   + LI  L + G+T  A ++L    + G   + F Y  +++G C+  + D A RL
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M     +PD   Y  ++ G C   RV EAL+LL      G  P + +Y+ L++ + +
Sbjct: 136 IASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           +  + +A     +M  +   P++V Y V+I G+   G+V DA + L+ +   G  PDT  
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  ++KG C     +    L  E+ +++ +PN  TF +L+   CR GMV+ A ++  +M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP-----TLFLRLSQGGNRVH 459
             GC  +  + N +I+ +CK G ++ A      M   G +P     T  L+      R  
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 460 D-KASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D K  L+ MV +                C  GLI +A  ++ Q++E G   +I+TYN+L+
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC  G ++ AL+LF  +  K   P+++TY TL+ GL   +R + A  +  +M Q  C 
Sbjct: 433 NGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCA 489

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   +  L+++ C++                  G  DE+++ +E+ ++ G   N I   
Sbjct: 490 PNVVTFNVLVSFFCQK------------------GLMDEAIELVEQMMEHGCTPNLITYN 531

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDG-------------------QVKEALNIFSVLVEC 664
             +D   ND         L GL  +G                   +V+EA+ +F ++ + 
Sbjct: 532 TLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL 591

Query: 665 KAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNG 700
              + P + +  K++  LCKR   D A+D F Y + NG
Sbjct: 592 G--MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNG 627



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 234/485 (48%), Gaps = 18/485 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + ++  + K  GF    + LDE+R+   +     + V+I+G  + G  + A E  
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++  +  QPD   Y  VL      + +     ++ EM++ NC+PN VTF +L+    + 
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E AI++L++M+  G   N     IVI+ +C+  R D+A++    M   GCSPD ++Y
Sbjct: 299 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 358

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C+  R ++A  LL+   +    P   +++  I  L +    ++A     +M E
Sbjct: 359 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              E ++V Y  ++ G    G+V  A++L   M  +   P+T  Y  L+ G C+   LD 
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 475

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ ++D  PN  TF +L+   C+ G++D+A +L  +M + GC P++  +N L+D
Sbjct: 476 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLD 535

Query: 422 GLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G+      E+A  LL   +  G +P              D  +  +++        + +A
Sbjct: 536 GITNDCNSEEALELLHGLVSNGVSP--------------DIVTYSSIIGVLSREDRVEEA 581

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+   + + G  P  + YN ++   CK  N +GA+  F  +   G  P+ +TY TLI G
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641

Query: 541 LQRVD 545
           L   D
Sbjct: 642 LANED 646



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 235/533 (44%), Gaps = 22/533 (4%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA RL  +    G +PD      L+   C+  R  +A  +LR+ E+ G    + +Y+ L+
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  R  + D A      M    + PD   Y  +IRGL + G+V +A+ LL DM  RG  
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y  L++  C      QA  +  E+  +   PN  T+ ++I GMCR G VDDA++ 
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N++   G  P    +  ++ GLC A   E    LF +M                N + +
Sbjct: 238 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM-------------MEKNCMPN 284

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + +   +V  +C  G++ +A ++L Q++  G   +    N +IN  CK G ++ A +   
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G  PD+++Y T++ GL R +R EDA  +  +M +  C P+   + + +   C++ 
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
               A  L  Q        +  +  + +  F  +G V++A++    M  K N      YT
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTIT---YT 461

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             L GLC   ++  A  + + +++        +   L+   C++G +D A+++    +++
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           G        N LL  +  + D     A  LL  + S G   D   Y     +L
Sbjct: 522 GCTPNLITYNTLLDGI--TNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL 572



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 3/340 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           VI+ + K    D  +Q L+ + S   S  +  +  ++ G  +    E A E   +M   +
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+   +N  + I  +K L   A  +  +M +  C  NIVT++ L+NG    G+ + A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++   M  +   PN  TYT +++GLC   R D A  L  +M    C+P+ V +N L++ F
Sbjct: 446 ELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+   +DEA+ L+    + G  P L +Y+ L+DG+      +EA      +    + PD+
Sbjct: 503 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDI 562

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I  LS   +V++A+K+   +++ G+ P    YN ++   C     D A      
Sbjct: 563 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 622

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +     +PN  T+  LI G+     + + + L  ++   G
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 3/311 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A     +M
Sbjct: 357 SYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQM 416

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E  C+ ++  YNA++N    +     AL ++Y M    C PN +T++ L+ GL  + + 
Sbjct: 417 SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERL 473

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L EM Q+   PN  T+ +++S  CQ    DEA  L  +M + GC+P+ + YN L
Sbjct: 474 DAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTL 533

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G       +EAL LL     +G  P + +YS +I  L R  R +EA   +  + +  +
Sbjct: 534 LDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P  V+Y  ++  L +      A+   + M   G +P+   Y  LI+G  +   L + R 
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653

Query: 365 LQVEIWKRDSL 375
           L  E+  R  L
Sbjct: 654 LLRELCSRGVL 664



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 180/416 (43%), Gaps = 47/416 (11%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L     + +A +L+     RG  PD Y    LI+  C  G    A  +     +  +
Sbjct: 50  LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
             +   +  L+ G CR G +D A++L   M  A   P    +  +I GLC  G + +A +
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALS 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LL   +  G  P++               +   ++E  C +    +A ++L ++   G  
Sbjct: 167 LLDDMLHRGCQPSVV--------------TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+I+TYN +ING C+ G ++ A +    L   G +PD+V+Y T++ GL    R ED   +
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-----IE 608
           F +M +  C P+   +  L+ + CR      A    +Q L  +SG    +  +     I 
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA----IQVLEQMSGHGCAANTTLCNIVIN 328

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
              ++G V++A Q L  M           YT  L GLC+  + ++A  +   +V      
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNC-- 386

Query: 669 TPPSCV---KLIHGLCKRGYLDLA-------------MDVFLY-TLKNGFILRPRV 707
            PP+ V     I  LC++G ++ A             +++  Y  L NGF ++ RV
Sbjct: 387 -PPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/631 (24%), Positives = 301/631 (47%), Gaps = 16/631 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +V   +  L   G++ +    PD + Y+ +       ++   A  ++ EM
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK-AHCLFLEM 160

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++   LP I+  + +I  L K  + + A  ++ +M   GI P+ FTY+++I GLC+    
Sbjct: 161 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 220

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R+  +M ++G  P+ + YN+L++G+      +E++ + +     G +P + + +  
Sbjct: 221 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 280

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRER 337
           I  LF+  R +EA   +  M  +  +PD++ Y  M+ G + A    + D   + + M  +
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI P+ + +N LI  +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DDA
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
              FN M   G  PS  ++  LI G C  GEL KA  L  +M     P   ++       
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY------ 454

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                   +++   C  G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A  
Sbjct: 455 ------FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 508

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +   G+ P+   YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++    
Sbjct: 509 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLA 636
           + R+ + A  ++ + +   +     +   +   L +    +    LLE  F +N  F + 
Sbjct: 569 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 628

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            + I +  + + G+ +EA  +F  +     +    +   +I  L K    + A ++F+  
Sbjct: 629 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 688

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            K+G     R+ N+++R LL   +  K   Y
Sbjct: 689 EKSGHASDSRLLNHIVRMLLNKAEVAKASNY 719



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 3/346 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +IS   ++G  + AL  F  M +    P   +Y  ++         + A  +  EM
Sbjct: 383 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEM 442

Query: 160 VKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           +  +  P  +  FS +IN L K G+      ++D M Q G  PN  T+  ++ G C +  
Sbjct: 443 MNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGN 502

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +EA+ L   M   G  P+   Y  L++G+CK  R+D+AL + R     G  P    YS 
Sbjct: 503 MEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSI 562

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++ GLF+A+R   A   + +M E      +  YGV++ GL       +A  LL  +    
Sbjct: 563 ILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMN 622

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  D   +N +I     +G   +A+ L   I     +PN  T++++I  + +    ++A 
Sbjct: 623 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEAD 682

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
            LF  +EK+G      + N ++  L    E+ KA+   Y   IG+N
Sbjct: 683 NLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS--NYLSIIGEN 726



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 89/183 (48%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +Y+ +L+  F+
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 569

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +++EM++     +I T+ +++ GL ++  T+ A  +L+++    +  +  T
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + IVIS + ++ R  EA  LF  +   G  P+   Y+ ++    K    +EA  L  S E
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689

Query: 266 KDG 268
           K G
Sbjct: 690 KSG 692


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/630 (24%), Positives = 301/630 (47%), Gaps = 16/630 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI  Y +V   +  L   G++ +    PD + Y+ +       ++   A  ++ EM+
Sbjct: 17  YNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK-AHCLFLEMM 75

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   LP I+  + +I  L K  + + A  ++ +M   GI P+ FTY+++I GLC+    D
Sbjct: 76  EQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMD 135

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+  +M ++G  P+ + YN+L++G+      +E++ + +     G +P + + +  I
Sbjct: 136 KAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFI 195

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRERG 338
             LF+  R +EA   +  M  +  +PD++ Y  M+ G + A    + D   + + M  +G
Sbjct: 196 HALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 255

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+ + +N LI  +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DDA 
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
             FN M   G  PS  ++  LI G C  GEL KA  L  +M     P   ++        
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY------- 368

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                  +++   C  G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A  L
Sbjct: 369 -----FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +   G+ P+   YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++    +
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAP 637
            R+ + A  ++ + +   +     +   +   L +    +    LLE  F +N  F +  
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           + I +  + + G+ +EA  +F  +     +    +   +I  L K    + A ++F+   
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           K+G     R+ N+++R LL   +  K   Y
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNY 633



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 252/565 (44%), Gaps = 23/565 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  K    +KA     +M E   +P+   YN++++      ++  ++ V+ +M 
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA- 219
               +P +   +  I+ L K G+T  A  + D M  +G  P+  +Y+ ++ G      + 
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240

Query: 220 -DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             + + +F  M   G +P+   +N L+N + +   +D+A+ +    +  G +P   +++ 
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +I  L R  R D+A   +  M +  + P   +YG +I+G    G++  A +L+S+M  + 
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 339 IVPDTYCY-NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           I P    Y +++I   C  G + + + +   + +    PN  TF  L+ G C  G +++A
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
             L + M   G  P+  ++  L+DG CK G ++ A  +F  M   G  PT  L       
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL------- 473

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                     ++     A     A K+  ++ ESG    I TY  ++ G C+    + A 
Sbjct: 474 -------YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 526

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L ++L    ++ D +T+  +I+ + +V R ++A  +F  +   G  P+   Y  ++T  
Sbjct: 527 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            +   +  A +L++   +     D   +  I    L K EV  A   L  +    N+  L
Sbjct: 587 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--ENNLTL 644

Query: 636 APYTIWLIG--LCQDGQVKEALNIF 658
              TI L+     ++G+ +E + + 
Sbjct: 645 EASTISLLASLFSREGKYREHIKLL 669



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 126/289 (43%), Gaps = 1/289 (0%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +Y+ +L+ 
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F+ +    A  +++EM++     +I T+ +++ GL ++  T+ A  +L+++    +  +
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+ IVIS + ++ R  EA  LF  +   G  P+   Y+ ++    K    +EA  L  
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           S EK G        + ++  L       +A  +   + E  +  +     ++    S  G
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL-GLLDQARSLQVEIW 370
           K ++ +KLL       +V  T     L+       G+L  AR+L  E W
Sbjct: 661 KYREHIKLLPANMTMAVVAATAKLVLLLAVLLQFSGVLTAARTLPGEEW 709


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 167/659 (25%), Positives = 304/659 (46%), Gaps = 86/659 (13%)

Query: 38  IMKTKNPQVGFRF----FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGN 93
           +  T+   +GF F    F   AK+    S  + + ++S L+K N     ++  D +  G 
Sbjct: 192 VYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGG 251

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +     +F  +I+ + K    + A+  F KM++    P+V  YN +++   +      A 
Sbjct: 252 IIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAY 311

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               +MVK    P+++T+S+ INGL K  K + A  +L EM++ G +PN+  Y  +I G 
Sbjct: 312 RFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGY 371

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C++    EA ++   M   G SP+ V  N+L+ GFCK  ++ +A  +L      G     
Sbjct: 372 CKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQ 431

Query: 274 GSYS-----------------------------------CLIDGLFRAKRYDEAYAWYRK 298
           GS+S                                    L+ GL +A +  EA   + +
Sbjct: 432 GSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR 491

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           +  +   P++V    +I GL +AG +++ +KLL DM ERG+V D   YN LI G C  G 
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           + +   L+ E+ K+   P+ +TF +L+ G+C    +D+A +L+++ +K G  P+V  +  
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +IDG CKA ++E+   L  ++ + K   L            +     +++  YC  G ++
Sbjct: 612 MIDGYCKANKVEEGENLLNEL-VSKKLEL------------NSVVYNSLIRAYCINGNMN 658

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A+++   +   G L    TY+SL++G C +G ++ A  L  E++ +GL P+ V Y T+I
Sbjct: 659 AAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII 718

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
            G  ++ +      +  +M  +   P+   Y  ++   C+                   G
Sbjct: 719 GGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKL------------------G 760

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           +  E+ K + E  +KG + +A+                 Y  +  GLC++G+V+EA  +
Sbjct: 761 KTKEAAKLLNEMTEKGILPDAVT----------------YNAFTNGLCKEGKVEEAFKV 803



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 192/743 (25%), Positives = 335/743 (45%), Gaps = 58/743 (7%)

Query: 25  LLPFLSKTTVTSVIMKTK---NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           L+P LS     S  +  K   NP+    FF + ++  + R  A +  V+  LL  N    
Sbjct: 78  LVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDL-- 135

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISG----YYKVGDCEKALESFGKMKEFDC--QPDVYI 135
                       +S    +   LI G    +Y      +  E    M +F+   +P + +
Sbjct: 136 ------------LSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGV 183

Query: 136 YNA-----VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
             A     V +  F+   F  A  V+  + K    P++ T + L++ L K+ + + + ++
Sbjct: 184 KIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEV 243

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D +   GI+P+   ++ +I+  C+ +R D+A  LF KM+  G +P+ V YN +++G CK
Sbjct: 244 YDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCK 303

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R+DEA        K+   P L +YS  I+GL + ++ DEA    ++M E    P+ V+
Sbjct: 304 SGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVV 363

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G  + G + +A+K+  DM  +GI P++   N+LI+GFC    + QA ++  E+ 
Sbjct: 364 YNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMI 423

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            R    N  +F+++I  +C       A     +M      P+ G+   L+ GLCKAG+  
Sbjct: 424 GRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ- 482

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
                      G+   L+ RL  G   V +  +   ++   C AG + +  K+L  + E 
Sbjct: 483 -----------GEAVELWCRL-LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLER 530

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G + D ITYN+LI+G CK G +    +L +E+  KG++PD  T+  L++GL   D+ ++A
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
            R++ +  +NG  P+   Y  ++   C+  K     +L    L ++  +  E    +   
Sbjct: 591 SRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENL----LNELVSKKLELNSVVYNS 646

Query: 611 LQKGEVENAIQGLLEMDFKLND--------FQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           L +      I G +   F+L D           A Y+  + GLC  G V +A ++   + 
Sbjct: 647 LIRAY---CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           +   +        +I G  K G ++  +++ L  + +  I  P    Y +    F K  K
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMN-KVNIVLQEMSSHNI-HPNKFTYTIMIDGFCKLGK 761

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
              A  LL  M   G   DA  Y
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTY 784



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 248/533 (46%), Gaps = 50/533 (9%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            +RF     K K   S  + S  I+ L+K    D     L E+          V+  LI 
Sbjct: 310 AYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLID 369

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNA---------------------------- 138
           GY K+G+  +AL+    M      P+    N+                            
Sbjct: 370 GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPI 429

Query: 139 -------VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
                  V+N    K  F+ AL    EM+  N  PN    + L++GL K+GK   A+++ 
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELW 489

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             +  +G +PN  T   +I GLC+     E  +L   M + G   D + YN L++G CK 
Sbjct: 490 CRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKE 549

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            +V E   L     K G  P + +++ L+ GL  A + DEA   + +  +    P+V  Y
Sbjct: 550 GKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY 609

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           GVMI G  +A KV++   LL+++  + +  ++  YN+LI+ +C  G ++ A  L+ ++  
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R  L +  T++ L+ G+C  G+VDDA+ L ++M K G  P+V  +  +I G  K G++ K
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            N++  +M                + +H +K +   M++ +C  G   +A K+L ++ E 
Sbjct: 730 VNIVLQEMS--------------SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK 775

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           G LPD +TYN+  NG CK G +  A K+  E+    +  D +TY TLI+G  +
Sbjct: 776 GILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 78/177 (44%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           N    FR       R  L S A+ S+++  L      D     LDE+R   +      + 
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYT 715

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            +I GY K+G   K      +M   +  P+ + Y  +++   +      A  +  EM + 
Sbjct: 716 TIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK 775

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             LP+ VT++   NGL K GK E A K+ DEM+   +  ++ TYT +I G  Q + A
Sbjct: 776 GILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQPSTA 832


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/428 (33%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +++ EM++   +P+IV F+ ++  ++K  K ++ I +  +M   GI  + +++TI+I 
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ +R   A  L  KM   G  P  V   +LLNGFC+  R  EA++L+ S +  GFVP
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ +I+GL + +  + A   +  M ++ I  D V Y  +I GLS +G+  DA +LL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM +R I P+   + ALI  F   G L +AR+L  E+ +R  +PN  T+  LI G C +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G + DA+ +F+ M   GCFP V  +N LI G CK+  +E    LF +M            
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---------- 352

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            QG   V D  +  T++  YC AG ++ A K+  ++ + G  PDI+TYN L++  C  G 
Sbjct: 353 -QG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I  AL + ++LQ   +  D +TY  +I GL R D+ ++A+ +F  + + G  P    Y +
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469

Query: 572 LMTWSCRR 579
           +++  CR+
Sbjct: 470 MISGLCRK 477



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 233/456 (51%), Gaps = 15/456 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A   F +M +    P +  +  VL +  +   F + + +Y++M  L    ++ +F++L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+   +  +  +A+ +L +M + G  P+  T   +++G CQ NR  EA  L   M   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V YN ++NG CK R ++ AL +    EK G      +Y+ LI GL  + R+ +A  
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             R M + KI+P+V+ +  +I    + G + +A  L  +M  R +VP+ + YN+LI GFC
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G L  A+ +   +  +   P+  T+  LI G C++  V+D  KLF +M   G      
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI G C+AG+L  A  +F +M + G +P              D  +   +++  C 
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP--------------DIVTYNILLDCLCN 406

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G I KA  ++  L +S    DIITYN +I G C+   +  A  LF+ L  KG++PD++ 
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           Y T+I+GL R   + +A ++  +M ++G  PS  +Y
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 224/509 (44%), Gaps = 47/509 (9%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A+ LF +M  S   P  V +  +L    K+ + D  + L    E  G    L S++ L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I    R  R   A A   KM +    P +V  G ++ G  +  + ++A+ L+  M   G 
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+   YN +I G C    L+ A  +   + K+    +  T+  LI G+  +G   DA +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L   M K    P+V  F ALID   K G L +A  L+ +M         +R S     V 
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM---------IRRSV----VP 287

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  +C  G +  A  +   +   G  PD++TYN+LI GFCK   +   +KLF
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+  +GL  D+ TY TLI+G  +  +   A ++F +M   G +P    Y  L+   C  
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN- 406

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                            +G+ ++++  +E+ LQK E+               D  +  Y 
Sbjct: 407 -----------------NGKIEKALVMVED-LQKSEM---------------DVDIITYN 433

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           I + GLC+  ++KEA  +F  L          + + +I GLC++G    A  +     ++
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
           GF+   R+ +  LR    S   + + A H
Sbjct: 494 GFMPSERIYDETLRDHYTSLSAELIKAAH 522



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 214/458 (46%), Gaps = 15/458 (3%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F  F    + + + S    + V++++ K N FD+      ++ +  +S     F +LI 
Sbjct: 63  AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
            + +      AL   GKM +   +P +    ++LN   +   F  A+++   M     +P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+V ++ +INGL K+     A+++   M ++GI  +  TY  +ISGL    R  +A RL 
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M      P+ + + AL++ F K   + EA  L +   +   VP + +Y+ LI+G    
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
               +A   +  M  +   PDVV Y  +I G  ++ +V+D MKL  +M  +G+V D + Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N LI G+C  G L+ A+ +   +      P+  T+ IL+  +C NG ++ A  +   ++K
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +     +  +N +I GLC+  +L++A  LF  +   G  P              D  +  
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP--------------DAIAYI 468

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           TM+   C  GL  +A K+  ++ E G +P    Y+  +
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 139/271 (51%), Gaps = 8/271 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI  + K G+  +A   + +M      P+V+ YN+++N          A  ++  MV
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P++VT++ LI G  KS + E  +K+  EMT +G++ + FTY  +I G CQ  + +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A ++F +M D G SPD V YN LL+  C   ++++AL ++   +K      + +Y+ +I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL R  +  EA+  +R +  + ++PD + Y  MI GL   G  ++A KL   M+E G +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           P    Y        D  L D   SL  E+ K
Sbjct: 497 PSERIY--------DETLRDHYTSLSAELIK 519


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 275/603 (45%), Gaps = 98/603 (16%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            P+ Y +N ++           A  ++ EM +  C PN  TF +L+ G  K+G T+  ++
Sbjct: 144 SPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA--------- 240
           +L+ M   G+LPNK  Y  ++S  C+  R D++ +L  KM++ G  PD V          
Sbjct: 204 LLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALC 263

Query: 241 ------------------------------YNALLNGFCKLRRVDEALALLRSFEKDGFV 270
                                         YN +L GFCK+  +++A  L  S  ++  +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             L SY+  + GL R  ++ EA    ++M ++ I P +  Y +++ GL + G + DA  +
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M+  G+ PD   Y  L+ G+C +G +D A+SL  E+ + + LPN +T  IL+  +  
Sbjct: 384 VGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWN 443

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G + +A++L  KM + G        N ++DGLC +GEL+KA      +EI K       
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA------IEIVK------- 490

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
               G RVH  A+L  +   Y   GL+  +      L E+  LPD+ITY++L+NG CK G
Sbjct: 491 ----GMRVHGSAALGNLGNSY--IGLVDDS------LIENNCLPDLITYSTLLNGLCKAG 538

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               A  LF E+  + L+PDS+ Y   I+   +  +   AFR+   M + GC  S   Y 
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           SL+          L   +  Q   +I G        ++E  +KG   N            
Sbjct: 599 SLI----------LGLGIKNQIF-EIHGL-------MDEMREKGISPN------------ 628

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               +  Y   +  LC+ G+V++A N+   +++        S   LI   CK    D+A 
Sbjct: 629 ----ICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQ 684

Query: 691 DVF 693
           +VF
Sbjct: 685 EVF 687


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 167/614 (27%), Positives = 296/614 (48%), Gaps = 29/614 (4%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG---ILPNKFTYTIVISGLCQ 215
           M +  C P++ ++S+L+ G     + E A+++L  M   G     PN  TYT VI GLC+
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               D A  +F  M D G  P+   Y  L++G+  + +  E + +L+     G  P    
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ L+D L +  R  EA   +  +  + I+P+V +YG+++ G +  G + +    L  M 
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G+ PD + +N +   +    ++D+A  +  ++ ++   PN  T+  LI  +C+ G VD
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           DA   FN+M   G  P + +F++L+ GLC   + EKA  LF+++           L QG 
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV-----------LDQGI 443

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D     T++   C  G + +A +++  +   G  PD+I+YN+L++G C  G I+ A
Sbjct: 444 RL--DTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            KL   +   GL+PD VTY TL++G  +  R +DA+ +F +M   G TP    Y +++  
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL--NDF 633
             +  +FS A  L   YL  I+ R   ++ +    +      N +    +M   L   D 
Sbjct: 562 LFQTGRFSEAKEL---YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDL 618

Query: 634 QLAPYT--IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           QL  +T  I +  L + G+ ++A+++F+ +     +    +   +   L K G L+   +
Sbjct: 619 QLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDE 678

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
           +F    +NG     R+ N L+R LL   D  +  AY  L ++    + L+A     T S+
Sbjct: 679 LFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAY--LSKLDEKNFSLEA----STTSM 732

Query: 752 LPGPWNTREMENMS 765
           L   ++  E + ++
Sbjct: 733 LISIYSRGEYQQLA 746



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 230/465 (49%), Gaps = 20/465 (4%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKE---FDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           DVF   +L+ G+      E+ALE    M +       P+V  Y  V++   + Q+   A 
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            V+  M+     PN  T++ LI+G    GK +  ++ML EM+  G+ P+ + Y +++  L
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  R  EA  +F  +   G  P+   Y  LL+G+     + E  + L     +G  P  
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             ++ +     +    DEA   + KM ++++ P++V YG +I  L + G+V DA+   + 
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M + G+ PD + +++L+ G C +   ++A  L  E+  +    +T  F  L+C +CR G 
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLS 452
           V +AQ+L + M + G  P V  +N L+DG C  G + E A LL   + IG  P       
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKP------- 515

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  DK +  T++  YC A  I  AY +  ++   G  PD++TYN++++G  + G  
Sbjct: 516 -------DKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 568

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           + A +L+  +     + +  TY  +INGL + +  ++AF++F  +
Sbjct: 569 SEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSL 613



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 223/513 (43%), Gaps = 13/513 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K    D        +    V   +  +  LI GY  +G  ++ ++   +M  
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST 265

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPD YIY  +L+   +      A  ++  +++    PN+  + +L++G +  G    
Sbjct: 266 HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSE 325

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
               LD M   G+ P+   + I+     +    DEA  +F KM+    SP+ V Y AL++
Sbjct: 326 MHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALID 385

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CKL RVD+A+        +G  P +  +S L+ GL    ++++A   + ++ ++ I  
Sbjct: 386 ALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRL 445

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V +  ++  L   G+V +A +L+  M   G+ PD   YN L+ G C  G +D+A  L 
Sbjct: 446 DTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLL 505

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             I      P+  T+  L+ G C+   +DDA  LF +M   G  P V  +N ++ GL + 
Sbjct: 506 DVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 565

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G   +A  L+  M   +                +  +   ++   C    + +A+K+   
Sbjct: 566 GRFSEAKELYLSMINSRTQM-------------NIYTYNIIINGLCKNNFVDEAFKMFHS 612

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L       DI T N +I    K G    A+ LF  +   GL PD  TY  +   L +   
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+   +F  M +NG  P+  +  +L+ W   R
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHR 705



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 178/362 (49%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D      D++R   +S     +  LI    K+G  + A+  F +M +    PD++++++
Sbjct: 358 IDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSS 417

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++        +  A  +++E++      + V F+ L+  L + G+   A +++D M + G
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVG 477

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           + P+  +Y  ++ G C   R DEA +L   +   G  PD V YN LL+G+CK RR+D+A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           +L R     G  P + +Y+ ++ GLF+  R+ EA   Y  M   + + ++  Y ++I GL
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +   V +A K+   +  + +  D +  N +I      G  + A  L   I     +P+ 
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+ ++   + + G +++  +LF+ ME+ G  P+  M NAL+  L   G++ +A     K
Sbjct: 658 ETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSK 717

Query: 439 ME 440
           ++
Sbjct: 718 LD 719



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 128/328 (39%), Gaps = 71/328 (21%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL---LFYKM----EIGKNPT 446
           ++DA KLF++M       SV  FN L+  + +A     + L   LF +M     I   P+
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 447 LFL------------RLSQG----------GNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            F             RL  G          G RV+D      +++  C A  + +A  IL
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 485 M-QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG---LRPDSVTYGTLING 540
           + ++ E G  PD+ +Y+ L+ GFC       AL+L   +   G     P+ VTY T+I+G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           L +    + A  +F  M   G  P+   Y  L                            
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCL---------------------------- 243

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                 I  +L  G+ +  +Q L EM           Y + L  LC++G+  EA NIF  
Sbjct: 244 ------IHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDS 297

Query: 661 LVECKAIVTPPSCVK--LIHGLCKRGYL 686
           ++  +  + P   +   L+HG    G L
Sbjct: 298 VI--RKGIKPNVTIYGILLHGYATEGSL 323


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 267/555 (48%), Gaps = 15/555 (2%)

Query: 71  SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
           S + K   ++L      ++ S  ++       ++I+ + +      A  + GK+ +   +
Sbjct: 96  SAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD  I+N +LN    +     AL +   MV++   P ++T + L+NGL  +GK   A+ +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           +D M + G  PN+ TY  V++ +C+  +   A  L  KM++     D V Y+ +++G CK
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              +D A  L    E  GF   + +Y+ LI G   A R+D+     R M + KI P+VV 
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + V+I    + GK+++A +LL +M +RGI P+T  YN+LI GFC    L++A  +   + 
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +   P+  TF ILI G C+   +DD  +LF +M   G   +   +N L+ G C++G+LE
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            A  LF +M                 RV  D  S + +++  C  G + KA +I  ++ +
Sbjct: 456 VAKKLFQEMV--------------SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           S    DI  Y  +I+G C    ++ A  LF  L LKG++ D+  Y  +I+ L R D    
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A  +F +M + G  P    Y  L+         + A  L  +        D  ++K +  
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621

Query: 610 FLQKGEVENAIQGLL 624
            L  GE++ +   +L
Sbjct: 622 MLSSGELDKSFLDML 636



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 241/503 (47%), Gaps = 14/503 (2%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D ++S  +  V D F  L S   K    E  L    +M+       +Y  + ++N   R 
Sbjct: 78  DMIQSRPLPTVID-FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    A +   +++KL   P+ V F+ L+NGL    +   A++++D M + G  P   T 
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             +++GLC   +  +A  L  +M ++G  P+ V Y  +LN  CK  +   A+ LLR  E+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
                    YS +IDGL +    D A+  + +M  +  + D++ Y  +I G   AG+  D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
             KLL DM +R I P+   ++ LI  F   G L +A  L  E+ +R   PNT T+  LI 
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G C+   +++A ++ + M   GC P +  FN LI+G CKA  ++    LF +M +     
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL----- 431

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                      + +  +  T+V+ +C +G +  A K+  ++      PDI++Y  L++G 
Sbjct: 432 --------RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C  G +  AL++F +++   +  D   Y  +I+G+    + +DA+ +F  +P  G     
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543

Query: 567 AVYKSLMTWSCRRRKFSLAFSLW 589
             Y  +++  CR+   S A  L+
Sbjct: 544 RAYNIMISELCRKDSLSKADILF 566



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 235/475 (49%), Gaps = 13/475 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A++ F  M +    P V  +N + +   + + + L LA+  +M       +I T S++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN   +  K   A   + ++ + G  P+   +  +++GLC   R  EA  L  +M + G 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  +  N L+NG C   +V +A+ L+    + GF P   +Y  +++ + ++ +   A  
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             RKM E  I+ D V Y ++I GL + G + +A  L ++M  +G   D   YN LI GFC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           + G  D    L  ++ KR   PN  TF++LI    + G + +A +L  +M + G  P+  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N+LIDG CK   LE+A  +           + L +S+G +   D  +   ++  YC A
Sbjct: 370 TYNSLIDGFCKENRLEEAIQM-----------VDLMISKGCD--PDIMTFNILINGYCKA 416

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             I    ++  +++  G + + +TYN+L+ GFC+ G +  A KLF+E+  + +RPD V+Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             L++GL      E A  IFG++ ++       +Y  ++   C   K   A+ L+
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 258/564 (45%), Gaps = 22/564 (3%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +  +M Q   LP    +  + S + +  + +    L  +M+  G +      +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N FC+ R++  A + +    K G+ P    ++ L++GL    R  EA     +M E 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +P ++    ++ GL   GKV DA+ L+  M E G  P+   Y  ++   C  G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++ +R+   +   ++I+I G+C++G +D+A  LFN+ME  G    +  +N LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 423 LCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            C AG  +    L   M   +I  N   F                  +++ +   G + +
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTF----------------SVLIDSFVKEGKLRE 351

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A ++L ++ + G  P+ ITYNSLI+GFCK   +  A+++   +  KG  PD +T+  LIN
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  + +R +D   +F +M   G   +   Y +L+   C+  K  +A  L+ + +      
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471

Query: 600 DDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           D  S K + + L   GE+E A++   +++    +  +  Y I + G+C   +V +A ++F
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             L      +   +   +I  LC++  L  A  +F    + G        N L+R+ L  
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL-- 589

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDA 742
            D+    A  L+  MKS G+  D 
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADV 613



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 182/401 (45%), Gaps = 36/401 (8%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V++++ K     L  + L ++   N+ + +  + ++I G  K G  + A   F +M+   
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            + D+  YN ++        +     +  +M+K    PN+VTFS+LI+   K GK   A 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF---------- 238
           ++L EM QRGI PN  TY  +I G C+ NR +EA ++   M   GC PD           
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 239 -------------------------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
                                    V YN L+ GFC+  +++ A  L +        P +
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            SY  L+DGL      ++A   + K+ + K+E D+ +Y ++I G+  A KV DA  L   
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +  +G+  D   YN +I   C    L +A  L  ++ +    P+  T+ ILI     +  
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
              A +L  +M+ +G FP+      ++  +  +GEL+K+ L
Sbjct: 594 ATTAAELIEEMKSSG-FPADVSTVKMVINMLSSGELDKSFL 633


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 263/577 (45%), Gaps = 91/577 (15%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           F+   Q +DE+     S        L+ G  K G  + A E   K+  F   P++++YNA
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N   +      A  +Y  M  +N  PN +T+S+LI+   +SG+ +VAI   D M Q G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           I    + Y  +I+G C+      A  LF++M + G  P    + +L++G+CK  +V +A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L      +G  P + +++ LI GL    +  EA   + ++ E KI+P  V Y V+I G 
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTY---------------------------------- 344
              GK+  A +LL DM ++G+VPDTY                                  
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 345 -CYNALIKGFCDLGLLDQARSLQVEIWKR--------------------------DSLPN 377
            CY+AL+ G+C  G L +A S   E+ +R                          D L +
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 378 TH---------TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
            H          +T +I    + G    A + ++ M    CFP+V  + AL++GLCKAGE
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 429 LEKANLLFYKMEIGKNPT------LFL-RLSQGGNR--------------VHDKASLQTM 467
           +++A LLF +M+    P        FL  L++ GN               + +  +   +
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNII 790

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +C  G  H+A K+L ++ E+G  PD +TY++LI  +C+ GN+  ++KL+  +  +GL
Sbjct: 791 IRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGL 850

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            PD V Y  LI G       + AF +   M + G  P
Sbjct: 851 EPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 185/723 (25%), Positives = 328/723 (45%), Gaps = 29/723 (4%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-FASNSAVISMLLKPNGFDLYWQTLDE 88
           + + + +++++  +P+  F  F+ + KR +  S    N  V + +L    FD     +  
Sbjct: 122 ANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVV-IVKL 180

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + + N+         L++G  KV       E F +      +PD Y  +AV+      + 
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           FL A      M       +IVT+++LI+GL K  +   A+++   +  +G+  +  TY  
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ G C++ + +   +L  +M + G SP   A + L++G  K  ++D+A  L+    + G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           FVP L  Y+ LI+ L +    D+A   Y  M    + P+ + Y ++I     +G++  A+
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                M + GI    Y YN+LI G C  G L  A SL +E+  +   P   TFT LI G 
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           C++  V  A KL+NKM   G  P+V  F ALI GLC   ++ +A+ LF ++ E    PT 
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPT- 539

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                        + +   ++E YC  G I KA+++L  + + G +PD  TY  LI+G C
Sbjct: 540 -------------EVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLC 586

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             G ++ A     +L  + ++ + + Y  L++G  +  R  +A     +M Q G      
Sbjct: 587 STGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLV 646

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            +  L+  + ++      F L L+ + D   R D  + +  I+ + ++G  + A +    
Sbjct: 647 CHAVLIDGALKQPDRKTFFDL-LKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCK 682
           M  +     +  YT  + GLC+ G++  A  +F  +   +A   PP+ +     +  L K
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM---QAANVPPNSITYGCFLDNLTK 762

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            G +  A+ +    LK G +      N ++R   F K  +   A  +L  M   G   D 
Sbjct: 763 EGNMKEAIGLHHAMLK-GLLANTVTHNIIIRG--FCKLGRFHEATKVLSEMTENGIFPDC 819

Query: 743 CLY 745
             Y
Sbjct: 820 VTY 822



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 177/420 (42%), Gaps = 39/420 (9%)

Query: 30  SKTTVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL 86
           + TT TS+I    K    Q  F+ +          +  + +A+IS L   N      +  
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELF 528

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY---------- 136
           DEL    +      + VLI GY + G  +KA E    M +    PD Y Y          
Sbjct: 529 DELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCST 588

Query: 137 -------------------------NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
                                    +A+L+   ++   + AL+   EM++     ++V  
Sbjct: 589 GRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCH 648

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI+G  K    +    +L +M  +G+ P+   YT +I    +     +A+  +  M  
Sbjct: 649 AVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVT 708

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C P+ V Y AL+NG CK   +D A  L +  +     P   +Y C +D L +     E
Sbjct: 709 EECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKE 768

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   +  M  + +  + V + ++IRG  + G+  +A K+LS+M E GI PD   Y+ LI 
Sbjct: 769 AIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIY 827

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            +C  G +  +  L   +  R   P+   + +LI G C NG +D A +L + M + G  P
Sbjct: 828 EYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 9/296 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF- 144
           +D+L   NV +    +  L+ GY + G   +AL +  +M +     D+  +  +++ A  
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK 657

Query: 145 ---RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              RK  F L   ++ + ++    P+ V ++ +I+  SK G  + A +  D M      P
Sbjct: 658 QPDRKTFFDLLKDMHDQGLR----PDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP 713

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N  TYT +++GLC+    D A  LF +M+ +   P+ + Y   L+   K   + EA+ L 
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH 773

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            +  K G +    +++ +I G  +  R+ EA     +M E  I PD V Y  +I     +
Sbjct: 774 HAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRS 832

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           G V  ++KL   M  RG+ PD   YN LI G C  G LD+A  L+ ++ +R  +P+
Sbjct: 833 GNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 189/759 (24%), Positives = 340/759 (44%), Gaps = 44/759 (5%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTK---NPQVGFRFFIWAAK- 56
           + + L  V +IL   +      + L+P LS     SV    +   NP+    FF +A+  
Sbjct: 113 DHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDS 172

Query: 57  ---RKRLRSFAS--NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG---- 107
              R  LRS+     S ++S  + P    L            + ++     VL       
Sbjct: 173 CGFRFTLRSYCVLMRSLIVSGFVSPARLLL------------IRLIDRKLPVLFGDPKNR 220

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + ++      L   G+        D+ I+  V    FR   F  A+ V+  +      P 
Sbjct: 221 HIEIASAMADLNEVGESGVAVAAVDLLIH--VYCTQFRNVGFRNAIGVFRFLANKGVFPT 278

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + T + L++ L K+ + E +  + + M Q G+ P+ + ++  I+  C+  + ++A +LF 
Sbjct: 279 VKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFF 337

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M+  G SP+ V YN L++G CK   +DEA        KDG    L +YS LI+GL + +
Sbjct: 338 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLE 397

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           +++EA +  ++  E+   P+ V+Y  +I G  + G + DA+++  DM  +GI P++   N
Sbjct: 398 KFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN 457

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ++I+GFC +G ++QA  +  E+  R    N   FT +I  +C N   + A +   +M   
Sbjct: 458 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P+ G+   L+ GLCK G+   A  L++++         L    G N V   A    +
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL---------LEKGFGANLVTTNA----L 564

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C  G + +A ++L ++ E G + D ITYN+LI+G CK G +    KL  E+  +G+
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 624

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD+ TY  LI+G+ R+ + ++A  ++ +       P+   Y  ++   C+  K      
Sbjct: 625 EPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEK 684

Query: 588 LWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L+ + L +++          I  + + G    A +   +M  K      A Y+  + G+C
Sbjct: 685 LFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMC 744

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
             G++++A  +   + +   +        LI G CK G +D  ++V      + + + P 
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM--SSYDIHPN 802

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              Y +    +SK      A  LL  M   G   D   Y
Sbjct: 803 KITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 841



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 284/603 (47%), Gaps = 64/603 (10%)

Query: 41  TKNPQVGFR----FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV 96
           T+   VGFR     F + A +    +  + + ++S L+K N  +  +   + +R G VS 
Sbjct: 253 TQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSP 311

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
              +F   I+ + K G  E A++ F  M++    P+V  YN +++   +      A    
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +MVK      ++T+S+LINGL K  K   A  +L E  ++G  PN+  Y  +I G C++
Sbjct: 372 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKM 431

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               +A R+   M   G +P+ V  N+++ GFCK+ ++++A  +L      GF    G++
Sbjct: 432 GNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAF 491

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD----------------------------- 307
           + +I  L    R++ A  + R+M    + P+                             
Sbjct: 492 TTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLE 551

Query: 308 ------VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                 +V    +I GL + G +++A++LL  M ERG V D   YN LI G C  G +++
Sbjct: 552 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 611

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
              L+ E+ K+   P+T T+ +LI GMCR G +D+A  L+N+ +     P+V  +  +ID
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671

Query: 422 GLCKAGELEKANLLFYKMEIGKN--------PTLFLRLSQGGNRV-----HD-------- 460
           G CKA ++E+   LF ++ + +N         TL     + GN V     HD        
Sbjct: 672 GYCKADKIEEGEKLFTEL-LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730

Query: 461 --KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
              A+  +++   C  G +  A  ++ ++ + G LP+++ Y +LI G+CK+G ++  + +
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +E+    + P+ +TY  +I+G  +    + A ++  +M   G  P    Y  L    C+
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850

Query: 579 RRK 581
             K
Sbjct: 851 EGK 853



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 206/427 (48%), Gaps = 48/427 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+ S   S+    F  +I         E AL    +M   + +P+  +   ++    +
Sbjct: 476 LEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCK 535

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A+ +++ +++     N+VT + LI+GL K+G  + A+++L +M +RG + +K T
Sbjct: 536 EGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKIT 595

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +ISG C+  + +E ++L  +M   G  PD   YN L++G C++ ++DEA+ L    +
Sbjct: 596 YNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK 655

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               VP + +Y  +IDG  +A + +E    + ++  + +E + V+Y  +IR     G   
Sbjct: 656 SRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTV 715

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A KL  DMR +GI P T  Y++LI G C++G ++ A+ L  E+ K   LPN   +T LI
Sbjct: 716 EAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 775

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G C+ G +D    +  +M      P+   +  +IDG  K+G+++ A  L ++M +GK  
Sbjct: 776 GGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM-VGK-- 832

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                                        G +PD +TYN L NG
Sbjct: 833 ---------------------------------------------GIVPDTVTYNVLTNG 847

Query: 506 FCKVGNI 512
           FCK G I
Sbjct: 848 FCKEGKI 854


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 248/520 (47%), Gaps = 18/520 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L      D     L +++   +S   D+F  +I  Y + G  E+AL++F +M++F 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P V IYN +L+    +  F +   +Y  M K    PN+ T+++L+  L K+ + + A 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L EM+ +G  P++ +YT +IS LC++ +  EA  L +       +P    YNAL+NG 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGV 256

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK    +EA  LL      G  P + SY+ +I+ L  A   + + A   KMF     P++
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             +  +I+G    G   +A+     M   G+VP+   YNAL+ G C    L  A S+  +
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN  T++ LI G  + G +D A +++N M   GC P+V  +  ++D LC+   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             +A  L   M++   P              +  +  T ++  C +G +  A K+  Q+ 
Sbjct: 437 FNQAYCLIENMQVENCPP-------------NTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            SG  P+  TYN L++   K      A  L K+++ +G+  + VTY T+I G        
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLG 543

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +A  + G+M   G  P       ++   C++ K ++A  L
Sbjct: 544 EALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 242/529 (45%), Gaps = 65/529 (12%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE---SFGKMK 125
           ++  L K N  D   + L E+ S         +  LIS   K+G  ++A E   SF    
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF---- 242

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                P V +YNA++N   ++  F  A  +  EM+     PN+++++ +IN LS +G  E
Sbjct: 243 ----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           +++ +L +M  RG  PN  T+T +I G      + EA   + +M   G  P+ VAYNAL+
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G C  R + +A+++    E +G  P + +YS LIDG  +A   D A   +  M      
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCH 418

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+VV Y  M+  L        A  L+ +M+     P+T  +N  IKG C  G +D     
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD----- 473

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
               W                          A K+F++M  +GCFP+   +N L+D L K
Sbjct: 474 ----W--------------------------AIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                +A  L   ME   +  + L L           +  T++  YC AG++ +A ++L 
Sbjct: 504 DRRFGEAFGLVKDME---HRGIELNL----------VTYNTIIYGYCCAGMLGEALELLG 550

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  PD IT N +I+ +CK G +N A++L   L      PD + Y +LI+G+    
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHI 610

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS-LAFSLWLQYL 593
             E+A     +M   G +P+ A +  L+     R  FS +  S  +Q+L
Sbjct: 611 GVEEAIVYLRRMLSEGISPNVATWNVLV-----RHLFSNMGHSGAVQFL 654



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 250/584 (42%), Gaps = 54/584 (9%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T+ ++I  L+   + +    +L +M   GI  ++  +  VI    +   +++A + F +
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+D    P    YN +L+      R      +  + +KDG  P + +Y+ L+  L +  R
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK----------------------- 325
            D A+    +M  +  +PD V Y  +I  L + GKVK                       
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 326 -------DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
                  +A +LL +M  +GI P+   Y  +I    D G ++ + ++  +++ R   PN 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           HTFT LI G    G   +A   +++M + G  P+V  +NAL+ GLC    L  A  +F +
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 439 MEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           MEI G  P +               +   +++ Y  AG +  A ++   +   G  P+++
Sbjct: 377 MEINGCCPNV--------------RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            Y  +++  C+    N A  L + +Q++   P++VT+ T I GL    R + A ++F QM
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE-----SMKSIEEFLQ 612
             +GC P+   Y  L+    + R+F  AF L    ++D+  R  E         I  +  
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGL----VKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G +  A++ L +M  +          I +   C+ G+V  A+ +   L   K      +
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
              LI G+C    ++ A+      L  G        N L+R L 
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLF 642



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 194/411 (47%), Gaps = 1/411 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I+ L      +L    L ++ +   S     F  LI G++  G   +AL+ + +M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 P+V  YNA+++    K+    A++V+ +M    C PN+ T+S LI+G +K+G  
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++ + M   G  PN   YT ++  LC+ +  ++AY L   M+   C P+ V +N  
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C   RVD A+ +       G  P   +Y+ L+D L + +R+ EA+   + M    I
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           E ++V Y  +I G   AG + +A++LL  M  RG  PD    N +I  +C  G ++ A  
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL- 423
           L   +      P+   +T LI G+C +  V++A     +M   G  P+V  +N L+  L 
Sbjct: 583 LMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLF 642

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
              G       L     +     + +   + G ++H  +S+ + VE+   A
Sbjct: 643 SNMGHSGAVQFLDASSIMQPKFVVLIITKEAGGQLHSVSSMGSPVERAICA 693



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 180/373 (48%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ + K   F+  +Q LDE+ +  +      +  +I+     G+ E +L    KM  
Sbjct: 250 NALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFA 309

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+++ + +++   F K     AL  +  M++   +PN+V ++ L++GL        
Sbjct: 310 RGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGD 369

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ + ++M   G  PN  TY+ +I G  +    D A  ++  M   GC P+ VAY  +++
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVD 429

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+    ++A  L+ + + +   P   +++  I GL  + R D A   + +M      P
Sbjct: 430 VLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   Y  ++  L +  +  +A  L+ DM  RGI  +   YN +I G+C  G+L +A  L 
Sbjct: 490 NTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  R + P+  T  I+I   C+ G V+ A +L +++      P +  + +LI G+C  
Sbjct: 550 GKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTH 609

Query: 427 GELEKANLLFYKM 439
             +E+A +   +M
Sbjct: 610 IGVEEAIVYLRRM 622



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 221/518 (42%), Gaps = 76/518 (14%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDG-------FVPRLGSYSCLIDGLFRAKRYDE 291
           + Y  ++      R +D    LL+  + +G       F+  +GSY        RA   ++
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR-------RAGSSEQ 129

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + +M + +++P V +Y  ++  L +  + +    + S+M++ G+ P+ + YN L+K
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C    +D A  L VE+  +   P+  ++T LI  +C+ G V +A++L          P
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----P 244

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           SV ++NALI+G+CK    E+A  LL   M  G +P +               S  T++  
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI--------------SYTTIINA 290

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
              AG +  +  +L ++   G  P++ T+ SLI GF   G  + AL  +  +  +G+ P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V Y  L++GL       DA  +F QM  NGC P+   Y +L+    +      A  +W 
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW- 409

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                               +  G   N +                 YT  +  LC++  
Sbjct: 410 -----------------NWMITHGCHPNVV----------------AYTCMVDVLCRNSM 436

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKL---IHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
             +A   + ++   +    PP+ V     I GLC  G +D A+ VF     +G       
Sbjct: 437 FNQA---YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N LL SLL  KD +   A+ L+  M+  G +L+   Y
Sbjct: 494 YNELLDSLL--KDRRFGEAFGLVKDMEHRGIELNLVTY 529


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 264/558 (47%), Gaps = 20/558 (3%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C+PN  T+ +LI G S +G  ++AI++L+EM   G   N   +T ++ GLC   R  EA 
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F  M    C+PD + Y AL++  CK  + DEA  +LR     G  P   ++S LIDGL
Sbjct: 65  EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 284 FRAKRYDEAYAWYRKMFEEKI-EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +    ++A+     + +  +   D     ++ R  ++   V+ A K+L  +  +G  P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +N +I GFC    LD A  L   + ++  +PN  TFTILI G+C+   V +AQ+L  
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           KM   GC P+V  ++ +I+GLCK G+++ A  LF  ME    P              +  
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP-------------NVV 290

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++  C A  I +A ++  ++ E+G  PDIITYNSLI+G CK   ++ A +LF+ +
Sbjct: 291 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350

Query: 523 QLKGLR-PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR-RR 580
              G+   ++VTY TL +G   + R  DA RIF  +   G +P  A Y SL+   C+  R
Sbjct: 351 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
              +   +     +    R +     +    +    E AIQ    M  +        Y +
Sbjct: 411 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 470

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
            + G+ +  +  +AL +   +++ +     PS      L+  LC+ G  D A  +     
Sbjct: 471 VVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMS 530

Query: 698 KNGFILRPRVCNYLLRSL 715
           + GF       N LL  L
Sbjct: 531 ERGFAAAVSSYNGLLSGL 548



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 183/666 (27%), Positives = 295/666 (44%), Gaps = 55/666 (8%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D+  Q L+E++S      + V   L+ G    G   +ALE F  M + DC PDV  Y A
Sbjct: 25  LDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTA 83

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   +   F  A  +  EM+   C P+ VTFS LI+GL K G  E A ++L+++ QRG
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 199 ILPNKFTYTIVISGLC-QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           +  +   +  +I  LC + N  + A ++   +   G +P  + +N ++NGFCK + +D A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             LL    + G VP + +++ LI GL +A R  EA     KM      P+VV Y  +I G
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L + G+V DA +L   M  R   P+   +N LI G C    +++AR L   + +    P+
Sbjct: 264 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 323

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+  LI G+C++  VD+A +LF  + ++G                    +  AN + Y
Sbjct: 324 IITYNSLIDGLCKSFQVDEAFQLFQTIPESG--------------------VSAANAVTY 363

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
                   TLF          H  A+L  M +          A +I   L + G  PD+ 
Sbjct: 364 S-------TLF----------HGYAALGRMAD----------ACRIFSMLVDKGFSPDLA 396

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY SLI  +CK       ++L +E+  KG  P   T   ++ GL   +  E A ++F  M
Sbjct: 397 TYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 456

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQK 613
              GCT    +Y  ++    R  K + A ++  Q +     + + S  +    +E   Q 
Sbjct: 457 AARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQV 516

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G  ++A Q L +M  +     ++ Y   L GL +  +  EA  +F  +V         + 
Sbjct: 517 GRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTV 576

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             +I  LC    +D A ++     K G       CN L+    + K  +   A  LL  M
Sbjct: 577 NVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG--YCKSGRADLARKLLEEM 634

Query: 734 KSVGYD 739
              G +
Sbjct: 635 TEAGLE 640



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 160/582 (27%), Positives = 270/582 (46%), Gaps = 36/582 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++  L K   FD     L E+ +   +  +  F  LI G  K G  E+A      + +
Sbjct: 82  TALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 141

Query: 127 FDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                 D      +  +  +     LA  V   ++     P ++ F+L+ING  K+   +
Sbjct: 142 RGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 201

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A K+L+ M ++G +PN FT+TI+I+GLC+ NR  EA +L  KM   GCSP+ V Y+ ++
Sbjct: 202 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVI 261

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK  +VD+A  L +  E+    P + +++ LIDGL +AKR +EA   Y +M E    
Sbjct: 262 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 321

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VPDTYCYNALIKGFCDLGLLDQARS 364
           PD++ Y  +I GL ++ +V +A +L   + E G+   +   Y+ L  G+  LG +  A  
Sbjct: 322 PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR 381

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +   +  +   P+  T+T LI   C+     +  +L  +M   G  P V   +A++ GL 
Sbjct: 382 IFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLF 441

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           +    E+A  LF  M            ++G     D      +VE    A   +KA  +L
Sbjct: 442 EGNHTERAIQLFDSMA-----------ARGC--TDDALIYNLVVEGMARASKHNKALAVL 488

Query: 485 MQLAESGNL---PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            Q+ +  +    P     ++L+   C+VG  + A +L  ++  +G      +Y  L++GL
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-----DI 596
            R+ R ++A ++F  M   G  P  +    +++W C   K   A+ L  +  +     DI
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608

Query: 597 ------------SGRDDESMKSIEEFLQKG-EVENAIQGLLE 625
                       SGR D + K +EE  + G E  +    LLE
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLE 650



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 4/324 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMK 125
           +++I  L K    D  +Q    +    VS  + V +  L  GY  +G    A   F  + 
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +    PD+  Y +++    +    +  + +  EM      P + T S ++ GL +   TE
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF---LKMKDSGCSPDFVAYN 242
            AI++ D M  RG   +   Y +V+ G+ + ++ ++A  +    +  +D   +P   A +
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVD 507

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           AL+   C++ R D+A  LL    + GF   + SY+ L+ GL R +R+DEA   +  M   
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSA 567

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P++    V+I  L  A KV DA +L+  M + G  PD    N LI G+C  G  D A
Sbjct: 568 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 627

Query: 363 RSLQVEIWKRDSLPNTHTFTILIC 386
           R L  E+ +    PN  T  +L C
Sbjct: 628 RKLLEEMTEAGLEPNDTTHDLLEC 651



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 164/391 (41%), Gaps = 68/391 (17%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R  +PN  T+ ILI G    G +D A +L  +M+  G   +  +   L+ GLC AG + +
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A   F  M     P              D  +   +V   C AG   +A  +L ++   G
Sbjct: 63  ALEHFRAMAKDCAP--------------DVMTYTALVHALCKAGKFDEAQGMLREMIARG 108

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL-QRVDREEDA 550
             PD +T+++LI+G CK G+   A ++ +++  +G+      + T+I  L  + +  E A
Sbjct: 109 CAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELA 168

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
            ++ G +   G TP+  ++  ++   C+ +    A+ L                  +E  
Sbjct: 169 SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKL------------------LEVM 210

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIV 668
           ++KG V N                   +TI + GLC+  +V EA  +   +V   C   V
Sbjct: 211 IEKGCVPNVF----------------TFTILITGLCKANRVGEAQQLLEKMVTGGCSPNV 254

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLRSLLFS---KDNKK 723
              S V  I+GLCK+G +D A ++F        ++  R C  N +  ++L     K  + 
Sbjct: 255 VTYSTV--INGLCKQGQVDDAYELFQ-------LMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 724 VHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
             A  L  RM+  G   D   Y    SL+ G
Sbjct: 306 EEARQLYHRMRETGCAPDIITY---NSLIDG 333



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 4/156 (2%)

Query: 58  KRLRSFASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           KR R F  +S+ +  L++        D   Q L ++     +     +  L+SG  ++  
Sbjct: 494 KRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQR 553

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            ++A + F  M      P++   N V++          A  +   M KL C P+I T + 
Sbjct: 554 WDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 613

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
           LI G  KSG+ ++A K+L+EMT+ G+ PN  T+ ++
Sbjct: 614 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 174/637 (27%), Positives = 298/637 (46%), Gaps = 44/637 (6%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  T+S+LI    + G+ E    +   + + G   N   +  ++ GLC   R DEA  +
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 226 FL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV---PRLGSYSCLID 281
            L +M + GC+P+ V+YN L+ GFC   R +EAL LL     D  +   P + SY+ +I+
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G FR  + D+AY  + +M +  I PDVV Y  +I GL +A  V  A  +   M ++G+ P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG--------- 392
               YN LI G+   G   +   L  E+   D  P+   + +L+  +C+NG         
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 393 ------------MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
                       M+D+A  +F+KM + G  P+V  + ALID LCK G ++ A L F +M 
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492

Query: 440 ----------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
                     +  K   L   +   G R+ D     T++   C  G + +A +++  +  
Sbjct: 493 NEVYGLCTVEKWEKAEELVFEMLDQGIRL-DVVVFNTLMCDLCREGRVMEAQRLIELMLR 551

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD+I+YN+L++G C  G  + A KL   +   GL+P+  TY TL++G  +  R +D
Sbjct: 552 VGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDD 611

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A+ +  +M  NG TP    Y +++    +  +FS A  L+L  +   +  D  +   I  
Sbjct: 612 AYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILN 671

Query: 610 FLQKGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            L K   V+ A +    +  K     +  + I +  L + G+ ++A+++F+ +     + 
Sbjct: 672 GLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVP 731

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   +   L K G L+    +F    +NG     R+ N L+R  L   D  +  AY 
Sbjct: 732 DVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAY- 790

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
            L ++    + L+A     T S+L   ++  E + ++
Sbjct: 791 -LSKLDEKNFSLEA----STASMLISLYSRGEYQQLA 822



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/640 (24%), Positives = 272/640 (42%), Gaps = 102/640 (15%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQLFLLALAVYYE 158
            + +LI  + ++G  E     FG + +   + +  ++N +L  +   K+L      + + 
Sbjct: 197 TYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWR 256

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL---PNKFTYTIVISGLCQ 215
           M +  C PN+V+++ L+ G     + E A+++L  M     L   P+  +Y  VI+G  +
Sbjct: 257 MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFR 316

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             + D+AY LFL+M D G  PD V YN +++G CK + VD A A+ +     G  P  G+
Sbjct: 317 EGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGT 376

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI-------------------- 315
           Y+CLI G     ++ E      +M    +EPD  +Y +++                    
Sbjct: 377 YNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVI 436

Query: 316 -RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD-------------- 360
            +G+     + +A+ +   MR++G+ P+   Y ALI   C LG +D              
Sbjct: 437 RKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVY 496

Query: 361 ---------QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
                    +A  L  E+  +    +   F  L+C +CR G V +AQ+L   M + G  P
Sbjct: 497 GLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRP 556

Query: 412 SVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  +N L+DG C  G   E A LL   + IG  P  F              +  T++  
Sbjct: 557 DVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEF--------------TYNTLLHG 602

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNS----------------------------- 501
           YC A  I  AY +L ++  +G  PD++TYN+                             
Sbjct: 603 YCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWD 662

Query: 502 ------LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
                 ++NG CK   ++ A K+F+ L  KGL+   +T+  +I  L +  ++EDA  +F 
Sbjct: 663 MYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFA 722

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG 614
            +   G  P    Y  +     +         L+     + +  +   + + +  FL +G
Sbjct: 723 TISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRG 782

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTI-WLIGLCQDGQVKE 653
           ++  A   L ++D K  +F L   T   LI L   G+ ++
Sbjct: 783 DISRAGAYLSKLDEK--NFSLEASTASMLISLYSRGEYQQ 820



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/543 (23%), Positives = 224/543 (41%), Gaps = 46/543 (8%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   +       +  F+    R       + + VI  L K    D       +
Sbjct: 305 VSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQ 364

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI------ 142
           +    V   +  +  LI GY   G  ++ +    +M   D +PD +IY  +L+       
Sbjct: 365 MLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGR 424

Query: 143 ----------AFRK-----QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
                       RK      +   A+ ++ +M +    PN+V +  LI+ L K G+ + A
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA 484

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           I   ++M               + GLC + + ++A  L  +M D G   D V +N L+  
Sbjct: 485 ILKFNQMINE------------VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCD 532

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+  RV EA  L+    + G  P + SY+ L+DG     R DEA      M    ++P+
Sbjct: 533 LCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPN 592

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
              Y  ++ G  +A ++ DA  LL +M   G  PD   YN ++ G    G   +A+ L +
Sbjct: 593 EFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYL 652

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +    +  + +T+ I++ G+C+N  VD+A K+F  +   G    +  FN +I  L K G
Sbjct: 653 NMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGG 712

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + E A              LF  +S  G  V D  +   + E     G + +   +   +
Sbjct: 713 KKEDAM------------DLFATISAYG-LVPDVETYCLIAENLIKEGSLEELGVLFSAM 759

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E+G  P+    N+L+  F   G+I+ A     +L  K    ++ T   LI+   R + +
Sbjct: 760 EENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQ 819

Query: 548 EDA 550
           + A
Sbjct: 820 QLA 822


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 243/498 (48%), Gaps = 26/498 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I+   K G+   A     K+ E +  PD + Y +++    RK     AL V+ +M
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQM 446

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K  C PN VT+S LINGL  SG+   A  ++ EM   GILP   T T  I  LC +   
Sbjct: 447 AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCY 506

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A+RLF+ MK+ GC P+   Y AL++G C    +  A+ L     +DG  P   +Y+ L
Sbjct: 507 EDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNAL 566

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L   +R   A+     M    +  ++V Y  MI+G    G  K AM ++++M +RG 
Sbjct: 567 INILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH 626

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDA 397
             +   YN +IKG+CD G  +   +L++    RD    P+  ++T LICG C+   ++ A
Sbjct: 627 SANLVTYNTIIKGYCDSG--NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP------TLFLR 450
             LFN+M   G  P+   + ALIDG CK  +L+ A  L   M+  G  P       L   
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744

Query: 451 LSQGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPD 495
           L++  N    +   + M+E+                C  G    A ++  ++ E G LP+
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TY+SLI    + G +  A  LF EL+  GL PD +TY  +I       + E AF   G
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 556 QMPQNGCTPSPAVYKSLM 573
           +M + GC P+   Y  L+
Sbjct: 865 RMIKAGCQPTLWTYGVLI 882



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 271/554 (48%), Gaps = 22/554 (3%)

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  LD ++Q G+    F Y+ ++  L ++         + +M   G  P+ + YNA++N 
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK   V +A  +++   +    P   +Y+ +I G  R    D A   + +M +E  EP+
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  +I GL ++G+V +A  L+ +M   GI+P  +     I   CD+G  + A  L V
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++  +   PN +T+T LI G+C +G++  A  LF++M + G FP+   +NALI+ L +  
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 574

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            ++ A ++   M  G+N  LF  +           +   M++ YC  G   KA  ++  +
Sbjct: 575 RIKYAFVVLNLM--GRN-GLFTNI----------VTYNEMIKGYCILGDPKKAMLVMNNM 621

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G+  +++TYN++I G+C  GN   AL++   ++  G +PD  +Y  LI G  ++ + 
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           E AF +F +M  +G  P+   Y +L+   C+  K   A SL L++++    R +  +++ 
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL-LEHMKRSGCRPN--VQTY 738

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVE 663
              +     +N   G  E+   + +  + P    YT  + GLC++G    AL +F+ ++E
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              +    +   LI  L + G ++ A ++F    ++G I  P    Y+     +    K 
Sbjct: 799 QGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI--PDEITYVKMIEAYIMSGKV 856

Query: 724 VHAYHLLCRMKSVG 737
            HA++ L RM   G
Sbjct: 857 EHAFNFLGRMIKAG 870



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 247/531 (46%), Gaps = 51/531 (9%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           ++ Y+A+L    R  +    +  Y+ M+     PN++ ++ +IN L K G    A  ++ 
Sbjct: 350 LFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK 409

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           ++ +  + P+ FTYT +I G C+ +  D A ++F +M   GC P+ V Y+ L+NG C   
Sbjct: 410 KVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSG 469

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           RV+EA  L+R     G +P   + +  I  L     Y++A+  +  M  +  EP+V  Y 
Sbjct: 470 RVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYT 529

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL----------------------- 349
            +I GL  +G +K A+ L   M   G+ P+T  YNAL                       
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589

Query: 350 ------------IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                       IKG+C LG   +A  +   + +R    N  T+  +I G C +G    A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
            ++ + M   GC P    +  LI G CK  ++E A  LF +M + G  P           
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCP----------- 698

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              ++ +   +++ YC    +  A  +L  +  SG  P++ TYN LI+G  K  N +GA 
Sbjct: 699 ---NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +L K +  +G+ P+ VTY  +I+GL +      A  +F +M + GC P+   Y SL+   
Sbjct: 756 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQGLLEM 626
            +  K   A +L+ +  R     D+ + +K IE ++  G+VE+A   L  M
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 240/523 (45%), Gaps = 16/523 (3%)

Query: 79   FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            ++  W+   ++++         +  LISG    G  + A+  F +M      P+   YNA
Sbjct: 506  YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 565

Query: 139  VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
            ++NI    +    A  V   M +     NIVT++ +I G    G  + A+ +++ M QRG
Sbjct: 566  LINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625

Query: 199  ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
               N  TY  +I G C       A R+   M+D GC PD  +Y  L+ GFCK+ +++ A 
Sbjct: 626  HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685

Query: 259  ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
             L      DG  P   +Y+ LIDG  + ++ D A +    M      P+V  Y V+I GL
Sbjct: 686  GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745

Query: 319  SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            ++      A +L   M E GI P+   Y A+I G C  G    A  +  ++ ++  LPN 
Sbjct: 746  TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805

Query: 379  HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFY 437
             T++ LI  + + G V++A+ LF ++E+ G  P    +  +I+    +G++E A N L  
Sbjct: 806  LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865

Query: 438  KMEIGKNPTLF-----LRLSQGGNRVHDK--ASLQTMVEQYCTAGLI---HKAYKIL-MQ 486
             ++ G  PTL+     ++  +    + D+  A+L  +V   C+ G       A  ++  +
Sbjct: 866  MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN-CSFGYQTTDQDAVSVMSAK 924

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            LAE      +   N+L++     G    A +L   +  +GL PD   Y +L+  L RV  
Sbjct: 925  LAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRN 984

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC---RRRKFSLAF 586
             + A  +F  M   GC      YK L+   C   RR++  + F
Sbjct: 985  VDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 202/482 (41%), Gaps = 26/482 (5%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             +  +I GY   G+   AL     M++  C+PD + Y  ++    +      A  ++ EM
Sbjct: 632  TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            V     PN VT++ LI+G  K  K + A  +L+ M + G  PN  TY ++I GL + N  
Sbjct: 692  VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
              A  L   M + G  P+ V Y A+++G CK      AL +     + G +P L +YS L
Sbjct: 752  SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I  L +  + +EA   + ++    + PD + Y  MI     +GKV+ A   L  M + G 
Sbjct: 812  IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P  + Y  LIKG  +  LL   R   +     D +PN        C         DA  
Sbjct: 872  QPTLWTYGVLIKGLKNEYLLADQRLAALP----DVVPN--------CSFGYQTTDQDAVS 919

Query: 400  LFN-KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            + + K+ +     SV + NAL+  L  AG   +AN L   M           +SQG    
Sbjct: 920  VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSM-----------ISQG--LC 966

Query: 459  HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
             D+ +  +++        +  A  +   ++  G    +  Y  LI   C++     A   
Sbjct: 967  PDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARIT 1026

Query: 519  FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            F+ + ++   PD V    LI+GL R   ++        M      PS  +Y  L   + +
Sbjct: 1027 FENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086

Query: 579  RR 580
            +R
Sbjct: 1087 KR 1088



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 154/361 (42%), Gaps = 11/361 (3%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +A+I    K    D     L+ ++          + VLI G  K  +   A E    M E
Sbjct: 704  TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 763

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P+V  Y A+++   +     LAL ++ +M++  CLPN++T+S LI  L + GK E 
Sbjct: 764  EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 823

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A  +  E+ + G++P++ TY  +I       + + A+    +M  +GC P    Y  L+ 
Sbjct: 824  AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 883

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G     + +  LA  R       VP     +C     ++    D       K+ E     
Sbjct: 884  GL----KNEYLLADQRLAALPDVVP-----NCSFG--YQTTDQDAVSVMSAKLAELDPGL 932

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             V +   ++  LS AG+  +A +LL  M  +G+ PD   YN+L+     +  +D A  + 
Sbjct: 933  SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 992

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
              +  +    + + +  LIC +C+     +A+  F  M      P   +   LIDGL + 
Sbjct: 993  KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 1052

Query: 427  G 427
            G
Sbjct: 1053 G 1053



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 105/250 (42%), Gaps = 10/250 (4%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +    L  L++SG    +  Y++L+    ++G     +  +  +  +G++P+ + Y  +I
Sbjct: 333 RTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVI 392

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           N L +     DA  I  ++ ++  +P    Y S++   CR+     A  ++ Q  ++   
Sbjct: 393 NALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCE 452

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +  +  + I      G V  A   + EM            T  +I LC  G  ++A  +
Sbjct: 453 PNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRL 512

Query: 658 FSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           F   V+ K     P+      LI GLC  G L +A+ +F    ++G        N L+  
Sbjct: 513 F---VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569

Query: 715 LLFSKDNKKV 724
           L+   +N+++
Sbjct: 570 LV---ENRRI 576


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 184/692 (26%), Positives = 317/692 (45%), Gaps = 67/692 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+++ L +   F    +  D L +  V     ++ V++    ++ D  KA E   + + 
Sbjct: 194 SALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEG 253

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C   +  YN  +N   + +    A+ V   + +     ++VT+  L+ GL +  + EV
Sbjct: 254 NGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEV 313

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            ++M+DEM + G +P++   + +I GL ++   + A+ L  K+   G  P+   YN+++N
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMIN 373

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  +++EA  L     + G  P   +Y+ LIDG  R  + D A+ ++ KM E  I  
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISA 433

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V  Y  MI    + GK+K A  L  +M ++G+ P    Y +LI G+C  GL+ +A  L 
Sbjct: 434 TVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLY 493

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +   PNT TFT LICG+C+   + +A KLF++M +    P+   +N LI+G C+ 
Sbjct: 494 HEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCRE 553

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G   +A  LL   ++ G +P              D  + + ++   C+ G + +A + + 
Sbjct: 554 GNTTRAFELLDEMIKKGLSP--------------DTYTYRPLIAGLCSTGRVSEAKEFIN 599

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING-LQRV 544
            L       D + Y +L+ GFCK G I  AL   +E+  +GL+ D V+Y  LI+G L + 
Sbjct: 600 DLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQN 659

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW--------------- 589
           DR    F +  +M   G  P   +Y  L+    +      AF  W               
Sbjct: 660 DR--ILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTY 717

Query: 590 -----------------LQYLRDISGRDDESMKS----IEEFLQKGEVENAIQ---GLLE 625
                            L + R + G    +  +    ++   ++G +ENA+Q    +L+
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ 777

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCK 682
             F         Y I + G CQ G+ +EA  +  V++    I   P C+     I+  CK
Sbjct: 778 GSFA----NTVTYNILIRGYCQIGKFQEAAKLLDVMI---GIGMVPDCITYSTFIYEYCK 830

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           RG +D AMD++   L+ G      V N+L+ +
Sbjct: 831 RGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 269/545 (49%), Gaps = 27/545 (4%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           LP + T S L+N L++  K    +++ D +   G+ P+ + YT+V+  LC++   ++A  
Sbjct: 187 LPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKE 246

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +  + + +GCS   V YN  +NG CK +RV EA+ + RS  + G    L +Y  L+ GL 
Sbjct: 247 IINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC 306

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R + ++       +M E    P       +I GL + G ++ A +LL+ + + G+VP+ +
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN++I   C  G L++A  L   + +R   PN  T+TILI G  R   +D A   FNKM
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKAS 463
            + G   +V  +N++I+  CK G+++ A LLF +M + G  PT+              A+
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTV--------------AT 472

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             +++  YC  GL+ KA+K+  ++   G  P+ +T+ +LI G C++  +  A KLF E+ 
Sbjct: 473 YTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV 532

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
              + P+ VTY  LI G  R      AF +  +M + G +P    Y+ L+   C   + S
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592

Query: 584 LAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
            A   ++  L     R DE   +  ++ F ++G ++ A+    EM  +     L  Y + 
Sbjct: 593 EA-KEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVL 651

Query: 642 LIG-LCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
           + G L Q+ ++     +F +L E       P  V    LI G  K G L  A + +   +
Sbjct: 652 ISGALNQNDRI-----LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 698 KNGFI 702
             G++
Sbjct: 707 GEGYV 711



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 246/509 (48%), Gaps = 30/509 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+ +    + A   F KM E      VY YN+++N   +     +A  ++ EM
Sbjct: 402 TYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM 461

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P + T++ LI+G  K G    A K+  EMT +GI PN  T+T +I GLCQIN+ 
Sbjct: 462 VDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKM 521

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +LF +M +    P+ V YN L+ G C+      A  LL    K G  P   +Y  L
Sbjct: 522 AEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPL 581

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    R  EA  +   +  +    D + Y  +++G  + G++K+A+    +M  RG+
Sbjct: 582 IAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWK----RDSLPNTHTFTILICGMCRNGMVD 395
             D   Y  LI G      L+Q   +  E+ +    +   P+   +TILI G  ++G + 
Sbjct: 642 QMDLVSYAVLISG-----ALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLK 696

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK------NPTLFL 449
            A + +  M   G  P+   + AL++GL KAG + +A LLF +M +G+          FL
Sbjct: 697 KAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFL 756

Query: 450 -RLSQGGN-----RVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             L++ GN     ++H+           +   ++  YC  G   +A K+L  +   G +P
Sbjct: 757 DHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVP 816

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D ITY++ I  +CK GN++ A+ +++ +  +GL+PD V +  LI+        + A ++ 
Sbjct: 817 DCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLR 876

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             M   G  P+ + Y SLM    +R + +
Sbjct: 877 NDMMLRGLKPTQSTYHSLMVQLAQRARLT 905



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 162/350 (46%), Gaps = 2/350 (0%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++ LDE+    +S  +  +  LI+G    G   +A E    +     + D   Y A+L  
Sbjct: 560 FELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQG 619

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++     AL    EMV      ++V++++LI+G + +    +  ++L EM  +G+ P+
Sbjct: 620 FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLREMHGKGMQPD 678

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
              YTI+I G  +     +A+  +  M   G  P+ V Y AL+NG  K   V+EA  L +
Sbjct: 679 NVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFK 738

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                  +P   +Y C +D L +    + A   +  M +     + V Y ++IRG  + G
Sbjct: 739 RMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYCQIG 797

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K ++A KLL  M   G+VPD   Y+  I  +C  G +D A  +   + +R   P+   F 
Sbjct: 798 KFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFN 857

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
            LI   C NG +D A +L N M   G  P+   +++L+  L +   L + 
Sbjct: 858 FLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 12/315 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q LDEL           +  L+ G+ K G  ++AL +  +M     Q D+  Y  +++ A
Sbjct: 606 QRLDEL----------CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGA 655

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +   +L   +  EM      P+ V +++LI+G  KSG  + A +    M   G +PN 
Sbjct: 656 LNQNDRIL-FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNS 714

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT +++GL +    +EA  LF +M      P+ + Y   L+   K   ++ AL L  +
Sbjct: 715 VTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA 774

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +  F   + +Y+ LI G  +  ++ EA      M    + PD + Y   I    + G 
Sbjct: 775 MLQGSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGN 833

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V  AM +   M +RG+ PD   +N LI   C  G LD+A  L+ ++  R   P   T+  
Sbjct: 834 VDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHS 893

Query: 384 LICGMCRNGMVDDAQ 398
           L+  + +   +   Q
Sbjct: 894 LMVQLAQRARLTQVQ 908


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 248/520 (47%), Gaps = 18/520 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L      D     L +++   +S   D+F  +I  Y + G  E+AL++F +M++F 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P V IYN +L+    +  F +   +Y  M K    PN+ T+++L+  L K+ + + A 
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L EM+ +G  P++ +YT +IS LC++ +  EA  L +       +P    YNAL+NG 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGV 256

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK    +EA  LL      G  P + SY+ +I+ L  A   + + A   KMF     P++
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             +  +I+G    G   +A+     M   G+VP+   YNAL+ G C    L  A S+  +
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN  T++ LI G  + G +D A +++N M   GC P+V  +  ++D LC+   
Sbjct: 377 MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             +A  L   M++   P              +  +  T ++  C +G +  A K+  Q+ 
Sbjct: 437 FNQAYCLIENMQVENCPP-------------NTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            SG  P+  TYN L++   K      A  L K+++ +G+  + VTY T+I G        
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLG 543

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +A  + G+M   G  P       ++   C++ K ++A  L
Sbjct: 544 EALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQL 583



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 246/539 (45%), Gaps = 65/539 (12%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE---SFGKMK 125
           ++  L K N  D   + L E+ S         +  LIS   K+G  ++A E   SF    
Sbjct: 187 LLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSF---- 242

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                P V +YNA++N   ++  F  A  +  EM+     PN+++++ +IN LS +G  E
Sbjct: 243 ----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           +++ +L +M  RG  PN  T+T +I G      + EA   + +M   G  P+ VAYNAL+
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G C  R + +A+++    E +G  P + +YS LIDG  +A   D A   +  M      
Sbjct: 359 HGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCH 418

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+VV Y  M+  L        A  L+ +M+     P+T  +N  IKG C  G +D     
Sbjct: 419 PNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD----- 473

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
               W                          A K+F++M  +GCFP+   +N L+D L K
Sbjct: 474 ----W--------------------------AIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                +A  L   ME   +  + L L           +  T++  YC AG++ +A ++L 
Sbjct: 504 DRRFGEAFGLVKDME---HRGIELNL----------VTYNTIIYGYCCAGMLGEALELLG 550

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  PD IT N +I+ +CK G +N A++L   L      PD + Y +LI+G+    
Sbjct: 551 KMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHI 610

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS-LAFSLWLQYLRDISGRDDES 603
             E+A     +M   G +P+ A +  L+     R  FS +  S  +Q+L  + G   E+
Sbjct: 611 GVEEAIVYLRRMLSEGISPNVATWNVLV-----RHLFSNMGHSGAVQFLDAVLGSGFET 664



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/584 (23%), Positives = 250/584 (42%), Gaps = 54/584 (9%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T+ ++I  L+   + +    +L +M   GI  ++  +  VI    +   +++A + F +
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+D    P    YN +L+      R      +  + +KDG  P + +Y+ L+  L +  R
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK----------------------- 325
            D A+    +M  +  +PD V Y  +I  L + GKVK                       
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGV 256

Query: 326 -------DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
                  +A +LL +M  +GI P+   Y  +I    D G ++ + ++  +++ R   PN 
Sbjct: 257 CKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNL 316

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           HTFT LI G    G   +A   +++M + G  P+V  +NAL+ GLC    L  A  +F +
Sbjct: 317 HTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQ 376

Query: 439 MEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           MEI G  P +               +   +++ Y  AG +  A ++   +   G  P+++
Sbjct: 377 MEINGCCPNV--------------RTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            Y  +++  C+    N A  L + +Q++   P++VT+ T I GL    R + A ++F QM
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE-----SMKSIEEFLQ 612
             +GC P+   Y  L+    + R+F  AF L    ++D+  R  E         I  +  
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGL----VKDMEHRGIELNLVTYNTIIYGYCC 538

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G +  A++ L +M  +          I +   C+ G+V  A+ +   L   K      +
Sbjct: 539 AGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIA 598

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
              LI G+C    ++ A+      L  G        N L+R L 
Sbjct: 599 YTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLF 642



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 176/359 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I+ L      +L    L ++ +   S     F  LI G++  G   +AL+ + +M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 P+V  YNA+++    K+    A++V+ +M    C PN+ T+S LI+G +K+G  
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++ + M   G  PN   YT ++  LC+ +  ++AY L   M+   C P+ V +N  
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C   RVD A+ +       G  P   +Y+ L+D L + +R+ EA+   + M    I
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           E ++V Y  +I G   AG + +A++LL  M  RG  PD    N +I  +C  G ++ A  
Sbjct: 523 ELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQ 582

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           L   +      P+   +T LI G+C +  V++A     +M   G  P+V  +N L+  L
Sbjct: 583 LMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHL 641



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 180/373 (48%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ + K   F+  +Q LDE+ +  +      +  +I+     G+ E +L    KM  
Sbjct: 250 NALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFA 309

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+++ + +++   F K     AL  +  M++   +PN+V ++ L++GL        
Sbjct: 310 RGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGD 369

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ + ++M   G  PN  TY+ +I G  +    D A  ++  M   GC P+ VAY  +++
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVD 429

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+    ++A  L+ + + +   P   +++  I GL  + R D A   + +M      P
Sbjct: 430 VLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   Y  ++  L +  +  +A  L+ DM  RGI  +   YN +I G+C  G+L +A  L 
Sbjct: 490 NTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELL 549

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  R + P+  T  I+I   C+ G V+ A +L +++      P +  + +LI G+C  
Sbjct: 550 GKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTH 609

Query: 427 GELEKANLLFYKM 439
             +E+A +   +M
Sbjct: 610 IGVEEAIVYLRRM 622



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 224/518 (43%), Gaps = 76/518 (14%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDG-------FVPRLGSYSCLIDGLFRAKRYDE 291
           + Y  ++      R +D    LL+  + +G       F+  +GSY        RA   ++
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYR-------RAGSSEQ 129

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + +M + +++P V +Y  ++  L +  + +    + S+M++ G+ P+ + YN L+K
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C    +D A  L VE+  +   P+  ++T LI  +C+ G V +A++L          P
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----P 244

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           SV ++NALI+G+CK    E+A  LL   M  G +P +               S  T++  
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI--------------SYTTIINA 290

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
              AG +  +  +L ++   G  P++ T+ SLI GF   G  + AL  +  +  +G+ P+
Sbjct: 291 LSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPN 350

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V Y  L++GL       DA  +F QM  NGC P+   Y +L                  
Sbjct: 351 VVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL------------------ 392

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                           I+ + + G+++ A +    M        +  YT  +  LC++  
Sbjct: 393 ----------------IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM 436

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKL---IHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
             +A   + ++   +    PP+ V     I GLC  G +D A+ VF     +G       
Sbjct: 437 FNQA---YCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N LL SLL  KD +   A+ L+  M+  G +L+   Y
Sbjct: 494 YNELLDSLL--KDRRFGEAFGLVKDMEHRGIELNLVTY 529



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 106/218 (48%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++ +L + + F+  +  ++ ++  N    +  F   I G    G  + A++ F +M  
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   YN +L+   + + F  A  +  +M       N+VT++ +I G   +G    
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGE 544

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++L +M  RG  P+  T  IVI   C+  + + A +L  ++      PD +AY +L++
Sbjct: 545 ALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           G C    V+EA+  LR    +G  P + +++ L+  LF
Sbjct: 605 GICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLF 642


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 156/542 (28%), Positives = 271/542 (50%), Gaps = 43/542 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+++ ++ ++  LS +     A ++L  M + G+ PN +TY I++  LC   + +EA  +
Sbjct: 118 PSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 226 FL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
               M+ +GC+P+ V YN L+  FC+   VD A  L+    + G  P L +++ +++GL 
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A R ++A   + +M  E + PD V Y  ++ G  +AG + +A+ + ++M ++G+VPD  
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            + +LI   C  G L++A +L  ++ +R    N  TFT LI G CRNG +DDA     +M
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME--------------------IGKN 444
            +    PSV  +N LI+G CK G +++A  L ++ME                    IG  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 445 PTLFL--RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            + F   R       V D  +  +++   C    +  A ++  ++ + G  PD  TY +L
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTL 476

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+G CK GN+  AL L  E+  KG+ PD VTY  LI+GL +  R ++A R+  ++     
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P    Y++LM   CR  +F    +L   +          SMK +       + +   Q 
Sbjct: 537 VPDNIKYEALM-HCCRTAEFKSVVALLKGF----------SMKGL-----MNQADKVYQS 580

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +L+  +KL+    + Y++ + G C+ G + +AL+    L+ C       S + L+ GL +
Sbjct: 581 MLDRHWKLDG---SVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFE 637

Query: 683 RG 684
            G
Sbjct: 638 EG 639



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 233/480 (48%), Gaps = 38/480 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + +L+      G  E+AL   G  M+   C P+V  YN ++    R      A  +   
Sbjct: 156 TYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGV 215

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    P++VTF+ ++NGL K+G+ E A KM DEM + G+ P+  +Y  ++SG C+   
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +F +M   G  PD V + +L++  C+   ++ A+AL+    + G      +++ 
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  R    D+A    ++M E +I+P VV Y V+I G  + G++ +A +L+ +M  +G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y+ ++ G+C +G  D A  L  ++ K+  +P+  T++ LI G+C    + DA 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRL 451
           +LF KM + G  P    +  LIDG CK G ++KA  L  +M       ++     L   L
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL 515

Query: 452 SQGGN------------------------------RVHDKASLQTMVEQYCTAGLIHKAY 481
           S+                                 R  +  S+  +++ +   GL+++A 
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+   + +     D   Y+ LI+G C+ GNI  AL   K+L   G  P+S +  +L+ GL
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGL 635



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 239/525 (45%), Gaps = 39/525 (7%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  P+   Y  V+  L   +    A RL   M   G +P+   YN L+   C   + +EA
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 258 LALL-RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           L ++       G  P + +Y+ L+    RA   D A      M E  + P +V +  ++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL +AG+++DA K+  +M   G+ PD   YN L+ G+C  G L +A ++  E+ ++  +P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TFT LI  MCR G ++ A  L  +M + G   +   F ALIDG C+ G L+ A L  
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M E    P++                   ++  YC  G + +A +++ ++   G  PD
Sbjct: 354 KEMRECRIQPSVV--------------CYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TY+++++G+CK+G+ + A +L +++  KG+ PD++TY +LI GL    R  DA  +F 
Sbjct: 400 VVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFE 459

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M Q G  P    Y +L+   C+      A SL  + ++     D  +   + + L K  
Sbjct: 460 KMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSA 519

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTI-------------------WLIGLCQDGQVKEALN 656
                Q LL   FKL      P  I                    L G    G + +A  
Sbjct: 520 RTKEAQRLL---FKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADK 576

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           ++  +++    +       LIHG C+ G +  A+      L+ GF
Sbjct: 577 VYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 220/488 (45%), Gaps = 63/488 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +++   +    D   + +  +R G V      F  +++G  K G  E A + F +M  
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   YN +++   +      ALAV+ EM +   +P++VTF+ LI+ + ++G  E 
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313

Query: 187 AIKMLDEMTQRGILPNKFTYT-----------------------------------IVIS 211
           A+ ++ +M +RG+  N+FT+T                                   ++I+
Sbjct: 314 AVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLIN 373

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C++ R DEA  L  +M+  G  PD V Y+ +L+G+CK+   D A  L R   K G VP
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +YS LI GL   +R  +A   + KM +  ++PD   Y  +I G  + G V+ A+ L 
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT------------- 378
            +M ++G++PD   Y+ LI G        +A+ L  +++  D +P+              
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553

Query: 379 --HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              +   L+ G    G+++ A K++  M          +++ LI G C+ G + KA L F
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKA-LSF 612

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +K          LR     N     + ++ + E+    G+  +A  ++ +L    +L D 
Sbjct: 613 HKQ--------LLRCGFSPNSTSTISLVRGLFEE----GMTVEADNVIQELLNCCSLADA 660

Query: 497 ITYNSLIN 504
            T  +LI+
Sbjct: 661 ETSKALID 668



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 165/384 (42%), Gaps = 59/384 (15%)

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P    YNA++    D  L   AR L   + +    PN +T+ IL+  +C  G  ++A
Sbjct: 115 GYAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 398 QKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
             +  + M  AGC P+V  +N                                       
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYN--------------------------------------- 194

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T+V  +C AG +  A +++  + E G  P ++T+N+++NG CK G +  A 
Sbjct: 195 ---------TLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDAR 245

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           K+F E+  +GL PD V+Y TL++G  +     +A  +F +M Q G  P    + SL+   
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           CR      A +L  Q +R+   R +E   +  I+ F + G +++A+  + EM        
Sbjct: 306 CRAGNLERAVALVGQ-MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS 364

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMD 691
           +  Y + + G C+ G++ EA  +     E +A    P  V    ++ G CK G  D A +
Sbjct: 365 VVCYNVLINGYCKLGRMDEARELIH---EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFE 421

Query: 692 VFLYTLKNGFILRPRVCNYLLRSL 715
           +    LK G +      + L+R L
Sbjct: 422 LNRKMLKKGVVPDAITYSSLIRGL 445


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 256/496 (51%), Gaps = 16/496 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G Y  G    A + F +M      P++  +N VL+   ++   L A  +  ++
Sbjct: 153 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 212

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++     N+ T+++ I GL ++G+   A++++D M    + P+  TY  +I GLC+ +  
Sbjct: 213 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMP 271

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA     +M + GC PD   YN +++G+CK+  V EA  LL+     GFVP   +Y  L
Sbjct: 272 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 331

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL      + A   + +   + I+PD+V+Y  +++GL   G +  A++++++M E G 
Sbjct: 332 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 391

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN +I G C +G +  A  +  +   +  LP+  TF  LI G C+   +D A +
Sbjct: 392 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 451

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           L  +M + G  P    +N++++GLCKAG++ + N  F +M + G +P             
Sbjct: 452 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP------------- 498

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  +   ++E +C +  + +A K+++++++ G  PD +++N+LI GFC+ G++ GA  L
Sbjct: 499 -NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 557

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F++L+ KG    + T+ TLI           A +IF +M   G       Y+ L+  SC+
Sbjct: 558 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 617

Query: 579 RRKFSLAFSLWLQYLR 594
                 A+   ++ ++
Sbjct: 618 TANVDRAYMHLVEMIK 633



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 302/660 (45%), Gaps = 37/660 (5%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           + +  ++   I  Y + G    A+++F +M  F C P    YNA+++          A  
Sbjct: 47  ATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY  M+     P++ T ++ +     + +  +A+++L  +  RG +     Y  V+ GL 
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLY 162

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                 +A +LF +M  +   P+  A+N +L+  CK   V EA  LL    + G    L 
Sbjct: 163 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 222

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+  I GL  A R  EA      M    + PDVV Y  +IRGL +    ++AM  L  M
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G +PD + YN +I G+C + ++ +A  L  +   +  +P+  T+  LI G+C  G V
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL------ 447
           + A +LFN+ +  G  P + ++N+L+ GLC  G +  A  +  +M E G +P +      
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 448 FLRLSQGGN---------------RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
              L + GN                + D  +  T+++ YC    +  A +++ ++ E G 
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD ITYNS++NG CK G +N   + F+E+ LKG  P+ +TY  LI    R ++ E+A +
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSIEEF 610
           +  +M Q G  P    + +L+   CR      A+ L  Q L +   S   D     I  F
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY-LLFQKLEEKGYSATADTFNTLIGAF 580

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
             K  +  A +   EM  K +      Y + + G C+   V  A      +++   I + 
Sbjct: 581 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 640

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +  ++I+ L     +  A+ +    +K G +  P V + +L +     D K++ A  +L
Sbjct: 641 STFGRVINSLTVNHRVFQAVGIIHIMVKIGVV--PEVVDTILNA-----DKKEIAAPKIL 693



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 4/389 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G    GD E+ALE F + +    +PD+ +YN+++     + L L AL V  EM +  
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+I T++++INGL K G    A  ++++   +G LP+ FT+  +I G C+  + D A 
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M + G +PD + YN++LNG CK  +V+E     +     G  P   +Y+ LI+  
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R+ + +EA     KM +E + PD V +  +I G    G ++ A  L   + E+G     
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 570

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             +N LI  F     +  A  +  E+  +    +++T+ +LI G C+   VD A     +
Sbjct: 571 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 630

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           M K G  PS+  F  +I+ L     + +A  ++   ++IG  P +   +     +  + A
Sbjct: 631 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKK--EIA 688

Query: 463 SLQTMVEQYCTAGLI-HKAYKILMQLAES 490
           + + +VE     G I +  Y++L +  +S
Sbjct: 689 APKILVEDLMKKGHISYPTYEVLHEGVQS 717


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 250/472 (52%), Gaps = 29/472 (6%)

Query: 98  SDVFFVLISGYYKVG---DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           S  F  L++G+ K G   DCE+ LE+   M   D QP+V  YN +L    + + +  A  
Sbjct: 10  SVTFNALVNGFSKQGRPGDCERLLET---MAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 155 VYYEMVKLN--CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +  +M+       P++VT+S L++G  K+GK E + ++L E+  RG+ P+   YT V++ 
Sbjct: 67  LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+  R  EA  L  +M  +GC P  + +N L++G C+ + ++ A +LL+     G    
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+ L+DGL +A R  EA     +M      PDVV Y   + GL ++GKV DA ++L 
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRN 391
            MR+    P+   YN ++ G C  G +D A  +  ++   D    N   ++ ++ G+C+ 
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G   +A+ +   M +AGC P V  +++L++GLCKAG++E+A     +M + G  P     
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP----- 361

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-----PDIITYNSLING 505
                    +  +  ++V   C+ G + +A +++ +++  G       P + TYN+LI G
Sbjct: 362 ---------NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGG 412

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            CK G I+ ALK F+ ++ +G  PD V+Y T++ GL R  R   A  I  ++
Sbjct: 413 LCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 227/462 (49%), Gaps = 19/462 (4%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +  C PN VTF+ L+NG SK G+     ++L+ M  R I PN  +Y  ++ GLC++ R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 219 ADEAYRLFLKMKDSG--CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             EA  L   M   G   +PD V Y+ LL+G+CK  +V+E+  LL+     G  P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + ++  L ++ R  EA     +M      P ++ +  +I G      ++ A  LL  M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+  D   YN L+ G C  G L +A  L   +      P+   ++  + G+C++G V D
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A ++  +M  +   P+V  +N ++DGLCK+G+++ A  +  +M       L +       
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV------- 293

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T+V+  C  G   +A  ++  +A +G  PD++TY+SL+NG CK G I  A+
Sbjct: 294 -----VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----PQNGCTPSPAVYKS 571
           +  +E+ ++G +P++VTY +L++GL    R  +A R+  +M       + C PS + Y +
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNA 408

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           L+   C+  +   A   + +        D  S  +I E L +
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 204/417 (48%), Gaps = 25/417 (5%)

Query: 83  WQTLDEL------RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           W   +EL      R G  +     +  L+SGY K G  E++ E   ++     +PD  +Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             V+    +      AL +  EM++  C P ++TF+ LI+G  +    E+A  +L +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G+  +  TY  ++ GLC+  R  EA +L  +MK SGC+PD VAY++ + G CK  +V +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMI 315
           A  +L         P + +Y+ ++DGL ++ + D A     +M   +    +VV Y  ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL + G+ ++A  ++  M   G  PD   Y++L+ G C  G +++A     E+      
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKM-----EKAGCFPSVGMFNALIDGLCKAGELE 430
           PN  T+  L+ G+C  G + +A+++  +M         C PSV  +NALI GLCKAG ++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            A   F +M            SQG +   D  S  T+VE    +G   +A  IL ++
Sbjct: 421 DALKFFQRMR-----------SQGCD--PDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 179/393 (45%), Gaps = 54/393 (13%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+ V +  ++ G S+ G+  D  +LL  M  R I P+   YN L++G C L    +A  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 366 QVEIWKRD--SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
             ++  R   S P+  T++ L+ G C+ G V+++++L  ++   G  P   M+  ++  L
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK+  L +A  L  +M   G  PTL               +  T++   C    +  A  
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLI--------------TFNTLISGCCREKNLEMADS 173

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L ++A SG   D++TYN+L++G CK G +  A +L + ++  G  PD V Y + + GL 
Sbjct: 174 LLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  +  DA ++  QM  +   P+   Y +++   C+                  SG+ D 
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK------------------SGKIDT 275

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           +++ +E+                         +  Y+  + GLC+ G+ +EA ++   + 
Sbjct: 276 ALEMMEQMASSDGC---------------GLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 663 E--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              C+  V   S   L++GLCK G ++ A++  
Sbjct: 321 RAGCRPDVVTYS--SLVNGLCKAGKIEEAVEAV 351



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 41/310 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS   +    ++    L ++ +  V      +  L+ G  K G  ++A +   +MK 
Sbjct: 156 NTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV  Y++ +    +    L A  V  +M   +  PN+VT++ +++GL KSGK + 
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDT 275

Query: 187 AIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           A++M+++M +  G   N   Y+ V+ GLC++ R  EA  +   M  +GC PD V Y++L+
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPR--------------------------------- 272
           NG CK  +++EA+  +R    +G  P                                  
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395

Query: 273 -------LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                  + +Y+ LI GL +A R D+A  ++++M  +  +PD V Y  ++ GL+ +G+  
Sbjct: 396 GHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455

Query: 326 DAMKLLSDMR 335
            A  +LS++R
Sbjct: 456 QAEMILSEVR 465



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 164/383 (42%), Gaps = 58/383 (15%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G  P++  +NAL+ GF   G       L   +  RD  PN  ++  L+ G+C+   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 394 VDDAQKLFNKMEKAG--CFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
             +A++L   M   G    P +  ++ L+ G CKAG++E++  LL   +  G  P     
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP----- 115

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D      +V   C +  + +A ++L ++  +G  P +IT+N+LI+G C+  
Sbjct: 116 ---------DALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREK 166

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N+  A  L +++   G++ D VTY TL++GL +  R ++A ++  +M  +GC P    Y 
Sbjct: 167 NLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           S +   C+                                   G+V +A Q L +M    
Sbjct: 227 SFVYGLCK----------------------------------SGKVLDAHQVLEQMRDSH 252

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE---CKAIVTPPSCVKLIHGLCKRGYLD 687
           +D  +  Y   L GLC+ G++  AL +   +     C   V   S V  + GLCK G   
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV--VDGLCKLGRTQ 310

Query: 688 LAMDVFLYTLKNGFILRPRVCNY 710
            A  V     + G   RP V  Y
Sbjct: 311 EARSVMEAMARAG--CRPDVVTY 331



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 38/258 (14%)

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +G  P+ +T+N+L+NGF K G      +L + +  + ++P+ V+Y  L+ GL +++R  +
Sbjct: 4   TGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHE 63

Query: 550 AFRIFGQMPQNG--CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           A  +   M   G   TP    Y +L++  C+                  +G+ +ES + +
Sbjct: 64  AEELVRDMISRGGRSTPDMVTYSTLLSGYCK------------------AGKVEESRELL 105

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +E + +G   +A+                 YT  +  LC+  ++ EAL +   ++     
Sbjct: 106 KEVISRGLRPDALM----------------YTKVVASLCKSARLGEALELLEEMIRAGCC 149

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            T  +   LI G C+   L++A  +      +G        N L+  L   K  +   A 
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLC--KAGRLQEAE 207

Query: 728 HLLCRMKSVGYDLDACLY 745
            LL RMK+ G   D   Y
Sbjct: 208 QLLERMKASGCAPDVVAY 225


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 178/683 (26%), Positives = 309/683 (45%), Gaps = 102/683 (14%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P  Y +N ++           A  ++ EM +  C PN  TF +L+ G  K+G T+  +++
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA---------- 240
           L+ M   G+LPNK  Y  ++S  C+  R D++ ++  KM++ G  PD V           
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264

Query: 241 -----------------------------YNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                        YN +L GFCK+  +++A  L  S  ++  + 
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L SY+  + GL R  ++ EA    ++M ++ I P +  Y +++ GL + G + DA  ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M+  G+ PD   Y  L+ G+C +G +D A+SL  E+ + + LPN +T  IL+  + + 
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G + +A++L  KM + G        N ++DGLC +GEL+KA      +EI K        
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA------IEIVK-------- 490

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
              G RVH  A+L  +   Y   GL+  +      L E+  LPD+ITY++L+NG CK G 
Sbjct: 491 ---GMRVHGSAALGNLGNSY--IGLVDDS------LIENNCLPDLITYSTLLNGLCKAGR 539

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A  LF E+  + L+PDSV Y   I+   +  +   AFR+   M + GC  S   Y S
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599

Query: 572 L-MTWSCRRRKFSL-----------------AFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           L +    + + F +                  ++  +QYL +    +D +   ++E +QK
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED-ATNLLDEMMQK 658

Query: 614 GEVEN--AIQGLLEMDFKLNDFQLAP----------------YTIWLIGLCQDGQVKEAL 655
               N  + + L+E   K+ DF +A                 Y++    L   GQ+ +A 
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            +   +++    +       L+  LCK+  L++A  +    +  G+   P     ++  L
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778

Query: 716 LFSKDNKKVHAY-HLLCRMKSVG 737
               + K+ +++   +  M SVG
Sbjct: 779 GKMGNKKEANSFADKMMEMASVG 801



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 156/582 (26%), Positives = 269/582 (46%), Gaps = 58/582 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++  ++LL+    K  + E    +  +M   GI P  +T+ ++I  LC  +  D A  L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M + GC P+   +  L+ G+CK    D+ L LL + E  G +P    Y+ ++    R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV----P 341
             R D++     KM EE + PD+V +   I  L + GKV DA ++ SDM     +    P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           ++  YN ++KGFC +GLL+ A++L   I + D L +  ++ I + G+ R+G   +A+ + 
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---- 454
            +M   G  PS+  +N L+DGLCK G L  A  +   M+   +  +   +  L  G    
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 455 GNRVHDKASLQTMVEQYC---------------TAGLIHKAYKILMQLAESGNLPDIITY 499
           G     K+ LQ M+   C                 G I +A ++L ++ E G   D +T 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-----------------------PDSVTYGT 536
           N +++G C  G ++ A+++ K +++ G                         PD +TY T
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L+NGL +  R  +A  +F +M      P    Y   +   C++ K S AF    + L+D+
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF----RVLKDM 585

Query: 597 SGRD-DESMKSIEEFLQKGEVEN---AIQGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQV 651
             +   +S+++    +    ++N    I GL+ EM  K     +  Y   +  LC+  +V
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           ++A N+   +++        S   LI   CK    D+A +VF
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 187/732 (25%), Positives = 319/732 (43%), Gaps = 124/732 (16%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSF--ASNSAVISMLLKPNGFDLYWQTLDELRSGNV 94
           VI +  + ++G +FF WA+ R    S    ++S+++ +L     F      L+ +++ ++
Sbjct: 67  VIDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHL 126

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLAL 153
               + F  LI  Y + G  ++AL+ F  ++E  +C P     N +LN   +     +AL
Sbjct: 127 KPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVAL 186

Query: 154 AVYYEMVKLN---------------------------------------CLPNIVTFSLL 174
            +Y +M++ +                                       C+P++V ++++
Sbjct: 187 QLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMI 246

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD-------------- 220
           I+G  K G  + A + L+E+  +G+LP   TY  +I+G C+    +              
Sbjct: 247 IDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 306

Query: 221 ---------------------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
                                EA  +  +M + GC PD   YN ++N  CK  R++EA  
Sbjct: 307 NMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADE 366

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           LL   ++ G +P   SY+ L+    +   Y +A     ++ E   + D+V YG  I G+ 
Sbjct: 367 LLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVV 426

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
            AG++  A+ +   M E+G+ PD   YN L+ G C  G +   + L  E+  R+  P+ +
Sbjct: 427 VAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVY 486

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            F  LI G  RNG +D+A K+F  + + G  P +  +NA+I G CK G++  A     +M
Sbjct: 487 VFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEM 546

Query: 440 EIGKNPTLFLRLSQGGNRVH---DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
                           N VH   D+ +  T+++ Y     +  A K+  Q+ +    P++
Sbjct: 547 ----------------NSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 590

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITY SLINGFCK  ++  A K+F  ++   L P+ VTY TL+ G  +  + E A  IF  
Sbjct: 591 ITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFEL 650

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M  NGC P+ A +                      YL +       S   IEE   K   
Sbjct: 651 MLMNGCLPNDATF---------------------HYLINGLTNTATSPVLIEE---KDSK 686

Query: 617 ENAIQGLLE----MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           EN    +L+    M     D  +A Y   ++ LC+ G V  A  + + ++    ++    
Sbjct: 687 ENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVC 746

Query: 673 CVKLIHGLCKRG 684
              L+HGLC +G
Sbjct: 747 FTALLHGLCHKG 758



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/590 (23%), Positives = 257/590 (43%), Gaps = 96/590 (16%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L+EL+   V    + +  LI+G+ K G+ E   +   +M       +V ++N V++  
Sbjct: 261 RALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAE 320

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           ++  L   A  +   M ++ C P+I T++++IN   K G+ E A ++L++  +RG+LPNK
Sbjct: 321 YKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNK 380

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           F+YT ++   C+     +A  +  ++ + G   D V+Y A ++G      +D AL +   
Sbjct: 381 FSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREK 440

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G  P    Y+ L+ GL +  R         +M +  ++PDV ++  +I G    G+
Sbjct: 441 MMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGE 500

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + +A+K+   +  +G+ P    YNA+IKGFC  G +  A S   E+      P+ +T++ 
Sbjct: 501 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           +I G  +   +  A K+F +M K    P+V  + +LI+G CK  ++ +A  +F  M    
Sbjct: 561 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM---- 616

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                                              K++ +         +P+++TY +L+
Sbjct: 617 -----------------------------------KSFDL---------VPNVVTYTTLV 632

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL----------QRVDREEDA--- 550
            GF K G    A  +F+ + + G  P+  T+  LINGL          +  D +E+    
Sbjct: 633 GGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSL 692

Query: 551 -FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
               F  M  +G     A Y S++   C+                   G  D +   + +
Sbjct: 693 ILDFFTMMLLDGWDQVIAAYNSVIVCLCKH------------------GTVDTAQLLLTK 734

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            L KG + +++                 +T  L GLC  G+ KE  NI S
Sbjct: 735 MLTKGFLIDSV----------------CFTALLHGLCHKGKSKEWRNIIS 768



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 253/559 (45%), Gaps = 38/559 (6%)

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGF 248
           +L+ M  + + P +  ++ +I    +    D A +LF  +++   C P FVA N LLNG 
Sbjct: 117 VLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGL 176

Query: 249 CKLRRVDEALAL----LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            K  +VD AL L    L++ +  G V    + S ++ GL    + +E     +  + +  
Sbjct: 177 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCC 236

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P VV Y ++I G  + G ++ A + L++++ +G++P    Y ALI GFC  G  +    
Sbjct: 237 VPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQ 296

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+  R    N   F  +I    + G+V +A ++  +M + GC P +  +N +I+  C
Sbjct: 297 LLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSC 356

Query: 425 KAGELEKANLLFYKM-EIGKNPTLF----------------------LRLSQGGNRVHDK 461
           K G +E+A+ L  K  E G  P  F                       R+++ G +  D 
Sbjct: 357 KGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK-SDL 415

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            S    +     AG I  A  +  ++ E G  PD   YN L++G CK G I     L  E
Sbjct: 416 VSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSE 475

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  + ++PD   + TLI+G  R    ++A +IF  + + G  P    Y +++   C+  K
Sbjct: 476 MLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 535

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLA 636
            + A S  L  +  +    DE   S  I+ ++++ ++ +A++    +++  FK N   + 
Sbjct: 536 MTDALSC-LNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPN---VI 591

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT  + G C+   +  A  +FS +     +    +   L+ G  K G  + A  +F   
Sbjct: 592 TYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELM 651

Query: 697 LKNGFILRPRVCNYLLRSL 715
           L NG +      +YL+  L
Sbjct: 652 LMNGCLPNDATFHYLINGL 670


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 256/496 (51%), Gaps = 16/496 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G Y  G    A + F +M      P++  +N VL+   ++   L A  +  ++
Sbjct: 154 AYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV 213

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++     N+ T+++ I GL ++G+   A++++D M    + P+  TY  +I GLC+ +  
Sbjct: 214 IQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMP 272

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA     +M + GC PD   YN +++G+CK+  V EA  LL+     GFVP   +Y  L
Sbjct: 273 QEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSL 332

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL      + A   + +   + I+PD+V+Y  +++GL   G +  A++++++M E G 
Sbjct: 333 INGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGC 392

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN +I G C +G +  A  +  +   +  LP+  TF  LI G C+   +D A +
Sbjct: 393 HPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQ 452

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           L  +M + G  P    +N++++GLCKAG++ + N  F +M + G +P             
Sbjct: 453 LVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP------------- 499

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  +   ++E +C +  + +A K+++++++ G  PD +++N+LI GFC+ G++ GA  L
Sbjct: 500 -NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 558

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F++L+ KG    + T+ TLI           A +IF +M   G       Y+ L+  SC+
Sbjct: 559 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCK 618

Query: 579 RRKFSLAFSLWLQYLR 594
                 A+   ++ ++
Sbjct: 619 TANVDRAYMHLVEMIK 634



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 174/660 (26%), Positives = 302/660 (45%), Gaps = 37/660 (5%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           + +  ++   I  Y + G    A+++F +M  F C P    YNA+++          A  
Sbjct: 48  ATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY  M+     P++ T ++ +     + +  +A+++L  +  RG +     Y  V+ GL 
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLY 163

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                 +A +LF +M  +   P+  A+N +L+  CK   V EA  LL    + G    L 
Sbjct: 164 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 223

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+  I GL  A R  EA      M    + PDVV Y  +IRGL +    ++AM  L  M
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G +PD + YN +I G+C + ++ +A  L  +   +  +P+  T+  LI G+C  G V
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL------ 447
           + A +LFN+ +  G  P + ++N+L+ GLC  G +  A  +  +M E G +P +      
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 448 FLRLSQGGN---------------RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
              L + GN                + D  +  T+++ YC    +  A +++ ++ E G 
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD ITYNS++NG CK G +N   + F+E+ LKG  P+ +TY  LI    R ++ E+A +
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSIEEF 610
           +  +M Q G  P    + +L+   CR      A+ L  Q L +   S   D     I  F
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY-LLFQKLEEKGYSATADTFNTLIGAF 581

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
             K  +  A +   EM  K +      Y + + G C+   V  A      +++   I + 
Sbjct: 582 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 641

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +  ++I+ L     +  A+ +    +K G +  P V + +L +     D K++ A  +L
Sbjct: 642 STFGRVINSLTVNHRVFQAVGIIHIMVKIGVV--PEVVDTILNA-----DKKEIAAPKIL 694



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 4/389 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G    GD E+ALE F + +    +PD+ +YN+++     + L L AL V  EM +  
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+I T++++INGL K G    A  ++++   +G LP+ FT+  +I G C+  + D A 
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M + G +PD + YN++LNG CK  +V+E     +     G  P   +Y+ LI+  
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R+ + +EA     KM +E + PD V +  +I G    G ++ A  L   + E+G     
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 571

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             +N LI  F     +  A  +  E+  +    +++T+ +LI G C+   VD A     +
Sbjct: 572 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 631

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           M K G  PS+  F  +I+ L     + +A  ++   ++IG  P +   +     +  + A
Sbjct: 632 MIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNADKK--EIA 689

Query: 463 SLQTMVEQYCTAGLI-HKAYKILMQLAES 490
           + + +VE     G I +  Y++L +  +S
Sbjct: 690 APKILVEDLMKKGHISYPTYEVLHEGVQS 718


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 196/807 (24%), Positives = 356/807 (44%), Gaps = 106/807 (13%)

Query: 4   TLNEVLTILDTV---TPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR-KR 59
           T+++V  +LDT      +E AL           V  VI + K+ +V   +F W  ++ K+
Sbjct: 69  TVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVERKTKQ 128

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L S  + +A++ ++ +    +   Q L+E+        ++    +++ + K     +A  
Sbjct: 129 LHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFG 188

Query: 120 SFGKMKEFDCQP-----------------------------------DVYIYNAVLNIAF 144
               M++F  +P                                    V+++  ++ +  
Sbjct: 189 VIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFA 248

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R+     AL++  EM   +   ++V +++ I+   K GK ++A K   E+  +G++P+  
Sbjct: 249 REGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDV 308

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T+T +I  LC+  R DEA  LF ++  +   P   AYN ++ G+  + + +EA +LL   
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ 368

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           ++ G +P + +Y+C++  L R  + +EA      M +    P++  Y ++I  L +AG++
Sbjct: 369 KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGEL 427

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A+K+   M+E G+ P+    N +I   C    LD+A S+ + +  +   P++ TF  L
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSL 487

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM----- 439
           I G+ R+G V+DA  L+ KM  +G  P+  ++ +LI    K G  E  + ++ +M     
Sbjct: 488 IDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGC 547

Query: 440 ------------------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
                             EI K   LF  +   G    D  S   ++      G     Y
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTY 606

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+  ++ E G   D   YN +I+GFCK G +N A +L +E++ KGL+P  VTYG++I+GL
Sbjct: 607 KLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGL 666

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            ++DR ++A+ +F +        +  VY SL+    +                   GR D
Sbjct: 667 AKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGK------------------VGRID 708

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           E+   +EE +QKG   N                   +   L  L +  ++ EAL  F  +
Sbjct: 709 EAYLILEELMQKGLTPNTY----------------TWNCLLDALVKAEEIDEALVCFQNM 752

Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
              K +  PP+ V    +++GLCK    + A   +    K G  L+P    Y       +
Sbjct: 753 ---KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG--LKPNTITYTTMISGLA 807

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +    + A  L  R KS G   D+  Y
Sbjct: 808 RVGNVLEAKDLFERFKSSGGIPDSACY 834



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 270/556 (48%), Gaps = 23/556 (4%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K     + ++FF     +  +    + +++I +L K    D   +  +EL S        
Sbjct: 284 KVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVY 343

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY  VG   +A     + K   C P V  YN +L    RK     AL +  E 
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL-EA 402

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K++  PN+ ++++LI+ L K+G+ E A+K+ D M + G+ PN  T  I+I  LC+  R 
Sbjct: 403 MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  +FL +    C+PD V + +L++G  +  +V++A  L       G  P    Y+ L
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I   F+  R ++ +  Y++M      PD++L    +  + +AG+++    L  +++ +G+
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGL 582

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y+ LI G    G       L  E+ ++    +T  + I+I G C++G V+ A +
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQ 642

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGN 456
           L  +M+  G  P+V  + ++IDGL K   L++A +LF + +   +  N  ++  L  G  
Sbjct: 643 LLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFG 702

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAY----------------KILMQLAESGNL---PDII 497
           +V        ++E+    GL    Y                + L+      NL   P+ +
Sbjct: 703 KVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV 762

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY+ ++NG CKV   N A   ++E+Q +GL+P+++TY T+I+GL RV    +A  +F + 
Sbjct: 763 TYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERF 822

Query: 558 PQNGCTPSPAVYKSLM 573
             +G  P  A Y +++
Sbjct: 823 KSSGGIPDSACYNAMI 838



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 225/462 (48%), Gaps = 13/462 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI    K G+ E AL+    MKE    P++   N +++   + Q    A +++  + 
Sbjct: 414 YNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLD 473

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P+ VTF  LI+GL + GK   A  + ++M   G  PN   YT +I    +  R +
Sbjct: 474 HKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKE 533

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           + ++++ +M   GCSPD +  N  ++   K   +++  AL    +  G  P + SYS LI
Sbjct: 534 DGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILI 593

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL +     + Y  + +M E+ +  D   Y ++I G  ++GKV  A +LL +M+ +G+ 
Sbjct: 594 HGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQ 653

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y ++I G   +  LD+A  L  E   +    N   ++ LI G  + G +D+A  +
Sbjct: 654 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLI 713

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             ++ + G  P+   +N L+D L KA E+++A + F  M+  K P              +
Sbjct: 714 LEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPP-------------N 760

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + +   MV   C     +KA+    ++ + G  P+ ITY ++I+G  +VGN+  A  LF+
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFE 820

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
             +  G  PDS  Y  +I GL   ++  DA+ +F +    GC
Sbjct: 821 RFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGC 862



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 162/645 (25%), Positives = 293/645 (45%), Gaps = 36/645 (5%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFS 172
           E AL +F +M     QP++     V+ +  R +   +AL  Y+  V  K   L +   ++
Sbjct: 87  EDALNTFDEMP----QPEL-----VVGVIRRLKDVRVALH-YFRWVERKTKQLHSPEAYN 136

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            L+  ++++   E   ++L+EM+  G  P+  T   +++   +  +  EA+ +   M+  
Sbjct: 137 ALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKF 196

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
              P + AY  L+         D  L LLR  ++ G+   +  ++ LI    R  R D A
Sbjct: 197 KFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAA 256

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
            +   +M       D+VLY V I    + GKV  A K   +++ +G+VPD   + ++I  
Sbjct: 257 LSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGV 316

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C    +D+A  L  E+    S+P  + +  +I G    G  ++A  L  + ++ GC PS
Sbjct: 317 LCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPS 376

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           V  +N ++  L + G++E+A  +   M++   P L               S   +++  C
Sbjct: 377 VIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNL--------------TSYNILIDMLC 422

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            AG +  A K+   + E+G  P+IIT N +I+  CK   ++ A  +F  L  K   PDSV
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWL 590
           T+ +LI+GL R  +  DA+ ++ +M  +G TP+  VY SL+   + C R++      ++ 
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKED--GHKIYK 540

Query: 591 QYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           + +      D   + + ++   + GE+E       E+  +     +  Y+I + GL + G
Sbjct: 541 EMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGG 600

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
             K+   +F  + E    +   +   +I G CK G ++ A  +       G  L+P V  
Sbjct: 601 FSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG--LQPTVVT 658

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           Y       +K ++   AY L    KS   DL+  +Y    SL+ G
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYS---SLIDG 700



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%), Gaps = 4/360 (1%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + + LY + LD  ++ N  V +     LI  ++K G  E   + + +M    C PD+ + 
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTS----LIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  ++  F+        A++ E+      P++ ++S+LI+GL K G ++   K+  EM +
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +G+  +   Y IVI G C+  + ++AY+L  +MK  G  P  V Y ++++G  K+ R+DE
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE 674

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L    +       +  YS LIDG  +  R DEAY    ++ ++ + P+   +  ++ 
Sbjct: 675 AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLD 734

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
            L +A ++ +A+    +M+     P+   Y+ ++ G C +   ++A     E+ K+   P
Sbjct: 735 ALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKP 794

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           NT T+T +I G+ R G V +A+ LF + + +G  P    +NA+I+GL  A +   A +LF
Sbjct: 795 NTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 4/227 (1%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           +VI  L K +  D  +   +E +S  V +   V+  LI G+ KVG  ++A     ++ + 
Sbjct: 661 SVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQK 720

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P+ Y +N +L+   + +    AL  +  M  L C PN VT+S+++NGL K  K   A
Sbjct: 721 GLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA 780

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
                EM ++G+ PN  TYT +ISGL ++    EA  LF + K SG  PD   YNA++ G
Sbjct: 781 FVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEG 840

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEA 292
                +  +A  L       G   R+ S +C  L+D L +A   ++A
Sbjct: 841 LSNANKAMDAYILFEETRLKGC--RIYSKTCVVLLDALHKADCLEQA 885



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 3/210 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  L+EL    ++  +  +  L+    K  + ++AL  F  MK 
Sbjct: 695 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKN 754

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   Y+ ++N   + + F  A   + EM K    PN +T++ +I+GL++ G    
Sbjct: 755 LKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLE 814

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + +     G +P+   Y  +I GL   N+A +AY LF + +  GC         LL+
Sbjct: 815 AKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLD 874

Query: 247 GFCKLRRVDEAL---ALLRSFEKDGFVPRL 273
              K   +++A    A+LR   K     RL
Sbjct: 875 ALHKADCLEQAAIVGAVLREMAKSQHATRL 904


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 256/495 (51%), Gaps = 16/495 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  ++ G Y  G    A + F +M      P++  +N VL+   ++   L A  +  +++
Sbjct: 157 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 216

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     N+ T+++ I GL ++G+   A++++D M    + P+  TY  +I GLC+ +   
Sbjct: 217 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 275

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA     +M + GC PD   YN +++G+CK+  V EA  LL+     GFVP   +Y  LI
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL      + A   + +   + I+PD+V+Y  +++GL   G +  A++++++M E G  
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I G C +G +  A  +  +   +  LP+  TF  LI G C+   +D A +L
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
             +M + G  P    +N++++GLCKAG++ + N  F +M + G +P              
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHP-------------- 501

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +   ++E +C +  + +A K+++++++ G  PD +++N+LI GFC+ G++ GA  LF
Sbjct: 502 NPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLF 561

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++L+ KG    + T+ TLI           A +IF +M   G       Y+ L+  SC+ 
Sbjct: 562 QKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKT 621

Query: 580 RKFSLAFSLWLQYLR 594
                A+   ++ ++
Sbjct: 622 ANVDRAYMHLVEMIK 636



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/584 (27%), Positives = 270/584 (46%), Gaps = 30/584 (5%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           + +  ++   I  Y + G    A+++F +M  F C P    YNA+++          A  
Sbjct: 50  ATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY  M+     P++ T ++ +     + +  +A+++L  +  RG +     Y  V+ GL 
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLY 165

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                 +A +LF +M  +   P+  A+N +L+  CK   V EA  LL    + G    L 
Sbjct: 166 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 225

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+  I GL  A R  EA      M    + PDVV Y  +IRGL +    ++AM  L  M
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G +PD + YN +I G+C + ++ +A  L  +   +  +P+  T+  LI G+C  G V
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL------ 447
           + A +LFN+ +  G  P + ++N+L+ GLC  G +  A  +  +M E G +P +      
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 448 FLRLSQGGN---------------RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
              L + GN                + D  +  T+++ YC    +  A +++ ++ E G 
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD ITYNS++NG CK G +N   + F+E+ LKG  P+ +TY  LI    R ++ E+A +
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSIEEF 610
           +  +M Q G  P    + +L+   CR      A+ L  Q L +   S   D     I  F
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY-LLFQKLEEKGYSATADTFNTLIGAF 583

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
             K  +  A +   EM  K +      Y + + G C+   V  A
Sbjct: 584 SGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 627



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 212/470 (45%), Gaps = 50/470 (10%)

Query: 97  VSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           V DV  +  LI G  K    ++A+    +M    C PD + YN +++   +  +   A  
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +  + V    +P+ VT+  LINGL   G  E A+++ +E   +GI P+   Y  ++ GLC
Sbjct: 315 LLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLC 374

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                  A ++  +M + GC PD   YN ++NG CK+  + +A  ++      G++P + 
Sbjct: 375 LQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVF 434

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ LIDG  +  + D A     +M+E  I PD + Y  ++ GL +AGKV +  +   +M
Sbjct: 435 TFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEM 494

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G  P+   YN LI+ FC    +++A  + V++ +    P+  +F  LI G CRNG +
Sbjct: 495 ILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDL 554

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           + A  LF K+E+ G   +   FN LI     +G+L                         
Sbjct: 555 EGAYLLFQKLEEKGYSATADTFNTLIGAF--SGKLN------------------------ 588

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                                 +H A KI  ++   G+  D  TY  LI+G CK  N++ 
Sbjct: 589 ----------------------MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 626

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           A     E+  KG  P   T+G +IN L    R   A  I   M + G  P
Sbjct: 627 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 284/572 (49%), Gaps = 40/572 (6%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL---KPN-GFDLYWQTLDEL 89
           +   + +++N  + F  +        L SF S SA+I       KP  GF +    L   
Sbjct: 80  LVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRG 139

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
            + NV +++    +++ G  + G   +A+    +M      PD+  YN ++N   + +  
Sbjct: 140 FTVNVFIMN----IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A+ +  EM    C PN VT + L++GL K G+ + A+++L+ M ++G   +   Y  +
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           ISG C     D    LF +M   G S + V Y+ L++G C+L +  EA  +L +  + G 
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ LIDGL +  R   A      M E+  EP  V Y V++ GL + G V DA K
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICG 387
           +L  M E+G   D   YN L+KG CD G +D+A  L   ++  ++   PN  TF +LI G
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT 446
           +C+ G +  A K+  KM K G   ++  +N L+ G  KAG++++A  L+ + +++G  P 
Sbjct: 436 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 495

Query: 447 LF--------------LRLSQG---GNRVHDKA----SLQTMVEQYCTAGLIHKAYKILM 485
            F              L +++G     R H          T++   C  G + +A  +  
Sbjct: 496 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 555

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK----GLRPDSVTYGTLINGL 541
           ++  +   PDII++N++I+G  K G+     +  KELQ+K    GLRPD++T+ TLIN L
Sbjct: 556 EMGNANCEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ++   ++A     +M  +G TP   VY SL+
Sbjct: 612 SKLGELDEAKSALERMVASGFTPDALVYDSLL 643



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 172/652 (26%), Positives = 292/652 (44%), Gaps = 53/652 (8%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A+  F    +F+  P     N +++   R + + LA +VY  M  ++ LP+  + S LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
              + + K ++   ++  + +RG   N F   IV+ GLC+     EA  L  +M     S
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V+YN L+NG CK +++ EA+ LL   E  G  P   + + L+DGL +  R DEA   
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
              M ++  + DVVLYG +I G    G +    +L  +M  +GI  +   Y+ L+ G C 
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG   +A ++   + +    P+  T+T LI G+C++G    A  L N M + G  PS   
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 416 FNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +N L+ GLCK G +  A  +L   +E GK                D  +  T+++  C  
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKA--------------DVVTYNTLMKGLCDK 402

Query: 475 GLIHKAYKILMQLAESGNL--PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
           G + +A K+   + ++ N   P++ T+N LI G CK G +  A+K+ +++  KG   + V
Sbjct: 403 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 462

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  L+ G  +  + ++A  ++ Q+   G  P+   Y  L+   C+ R  ++A  L+   
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF--- 519

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                                   E    GL        +  L  Y   +  LC++G ++
Sbjct: 520 -----------------------CEMRTHGL--------NPALFDYNTLMASLCKEGSLE 548

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           +A ++F  +          S   +I G  K G      ++ +  ++ G  LRP    +  
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG--LRPDALTFST 606

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENM 764
                SK  +   A   L RM + G+  DA +Y      L    +T E+ N+
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINL 658



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 242/491 (49%), Gaps = 17/491 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++  L K    D   + L+ ++         ++  LISG+   G+ ++  E F +M  
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                +V  Y+ +++   R   +  A  V   M +    P++VT++ LI+GL K G+   
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L+ M ++G  P+  TY +++SGLC+     +A+++   M + G   D V YN L+ 
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 397

Query: 247 GFCKLRRVDEALALLRSF--EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           G C   +VDEAL L  S    ++   P + +++ LI GL +  R  +A   +RKM ++  
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 457

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             ++V Y +++ G  +AGK+K+AM+L   + + G VP+++ Y+ LI GFC + +L+ A+ 
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 517

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+      P    +  L+  +C+ G ++ A+ LF +M  A C P +  FN +IDG  
Sbjct: 518 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTL 577

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG+ +    L  KM E+G  P              D  +  T++ +    G + +A   
Sbjct: 578 KAGDFQFVKELQMKMVEMGLRP--------------DALTFSTLINRLSKLGELDEAKSA 623

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++  SG  PD + Y+SL+ G    G+    + L  ++  KG   D     T++  L  
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683

Query: 544 VDREEDAFRIF 554
             +E D   + 
Sbjct: 684 SIQEVDVMELL 694



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 169/360 (46%), Gaps = 12/360 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+SG  K G    A +    M E   + DV  YN ++     K     AL ++  M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 160 V-KLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
               NCL PN+ TF++LI GL K G+   A+K+  +M ++G   N  TY +++ G  +  
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA  L+ ++ D G  P+   Y+ L++GFCK+R ++ A  L       G  P L  Y+
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+  L +    ++A + +++M     EPD++ +  MI G  +AG  +   +L   M E 
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ PD   ++ LI     LG LD+A+S    +      P+   +  L+ G+   G   + 
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKA-GELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
             L ++M   G      + + ++  LC +  E++   LL         PT F   S+G +
Sbjct: 656 INLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL---------PTFFQGTSEGAS 706



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 147/358 (41%), Gaps = 20/358 (5%)

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
           N    +A  LF+        PS    N L+D L ++     A  ++ +M  +   P+   
Sbjct: 52  NSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSF-- 109

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        SL  ++E +  A      + ++  + + G   ++   N ++ G C+ 
Sbjct: 110 ------------GSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRN 157

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A+ L +E+  K + PD V+Y TLINGL +  + ++A  +  +M   GC P+    
Sbjct: 158 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 217

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMD 627
            +LM   C+  +   A  L L+ ++      D  +    I  F   G ++   +   EM 
Sbjct: 218 TTLMDGLCKDGRMDEAMEL-LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEML 276

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            K     +  Y+  + GLC+ GQ KEA  + + + E        +   LI GLCK G   
Sbjct: 277 GKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRAT 336

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            AMD+    ++ G        N LL  L   K+   + A+ +L  M   G   D   Y
Sbjct: 337 HAMDLLNLMVEKGEEPSNVTYNVLLSGL--CKEGLVIDAFKILRMMIEKGKKADVVTY 392



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R+  ++     +  L++   K G  E+A   F +M   +C+PD+  +N +++   +  
Sbjct: 521 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 580

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            F     +  +MV++   P+ +TFS LIN LSK G+ + A   L+ M   G  P+   Y 
Sbjct: 581 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYD 640

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            ++ GL       E   L  +M   G   D    + +L   C   +  + + LL +F
Sbjct: 641 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 697


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 179/686 (26%), Positives = 314/686 (45%), Gaps = 56/686 (8%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           D + ++    +  G   +A  +  KM+E     + Y YN +++   +      AL VY  
Sbjct: 160 DTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR 219

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV     P++ TFS L+    K    +  + +L+EM   G+ PN +TYTI I  L +  +
Sbjct: 220 MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGK 279

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEAYR+  +M D GC PD V Y  L++  C  R++D+A+ L    +     P   +Y  
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+D        D+    + +M  +   PDVV + +++  L +AG++ +A  LL  MR++G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           ++P+ + YN LI G      LD A  L   +      P  +T+ +LI    ++G    A 
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           + F KM+  G  P++   NA +  L + G L +A  +F ++             +     
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL-------------KSSGLA 506

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   M++ Y   G + +A K+L ++++    PD+I  NSLI+   K G +  A ++
Sbjct: 507 PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQM 566

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  ++   L P  VTY  L+ GL +  + + A ++F  M  +GC+P+   + +L+   C+
Sbjct: 567 FCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCK 626

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             +  LA  ++ + +  ++ R D    +  I  F+++ +++NAI    +M   L    + 
Sbjct: 627 NDEVDLALKMFYK-MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVT 685

Query: 637 PYTIWLIGLCQDGQVKEALNI-----------------------------------FSVL 661
             T+ L G+ + GQ+++A  I                                   F   
Sbjct: 686 LCTL-LPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGER 744

Query: 662 VECKAIVTPPSC-VKLIHGLCKRGYLDLAMDVFL-YTLKNGFILRPRVCNYLLRSLLFSK 719
           + C+AI    S  + +I  LCK     +A +VF+ +T + G     +V N L+   L   
Sbjct: 745 LVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFL-EV 803

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLY 745
            N +V A++L   MKS G   D   Y
Sbjct: 804 HNVEV-AWNLFEEMKSAGCAPDTFTY 828



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 169/676 (25%), Positives = 303/676 (44%), Gaps = 73/676 (10%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F +L++   K G   +A +    M++    P+++ YN +++   R      AL ++  M
Sbjct: 371  TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              L   P   T+ LLI+   KSG    A++  ++M  RGI PN       +  L ++ R 
Sbjct: 431  ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             EA  +F ++K SG +PD V YN ++  + K+ +VDEA+ LL    K    P +   + L
Sbjct: 491  GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            ID L++A R +EA+  + +M E  + P VV Y +++ GL + G+++ A++L   M   G 
Sbjct: 551  IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P+T  +N L+   C    +D A  +  ++   +  P+  TF  +I G  +   + +A  
Sbjct: 611  SPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIW 670

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA----NLLFYKMEIGKNPTLFLRLSQG- 454
            LF++M+K    P       L+ G+ K+G++E A       FY++    + + +  +  G 
Sbjct: 671  LFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGI 729

Query: 455  ------------GNRV------HDKASLQTMVEQYCTAGLIHKAYKILMQLA-ESGNLPD 495
                        G R+       D + L  +++  C       A  + ++   E G  P 
Sbjct: 730  LTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPT 789

Query: 496  IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            +  YN LI+GF +V N+  A  LF+E++  G  PD+ TY +LI+   +  +  + F ++ 
Sbjct: 790  LKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849

Query: 556  QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            +M   GC P+   Y  +++   +  +   A  L+                          
Sbjct: 850  EMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYY------------------------- 884

Query: 616  VENAIQGLLEMDFKLNDFQLAPYTI--WLIGLCQDGQVKEALNIFSVLVE--CKAIVTPP 671
              N + G         DF   P T    + GL + G++ +A  +F  +V   C+    P 
Sbjct: 885  --NLVSG---------DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR----PN 929

Query: 672  SCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
            S +   L++G  K G++D A + F   +K G  +RP + +Y +   +     +   A H 
Sbjct: 930  SAIYNILVNGYGKLGHVDTACEFFKRMVKEG--IRPDLKSYTILVDILCIAGRVDDALHY 987

Query: 730  LCRMKSVGYDLDACLY 745
              ++K  G D D   Y
Sbjct: 988  FEKLKQAGLDPDLVAY 1003



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 163/605 (26%), Positives = 270/605 (44%), Gaps = 69/605 (11%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+ T+ ++   L   G    A   L++M + G + N ++Y  +I  L Q     EA  ++
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M   G  P    ++AL+    K R +   + LL   E  G  P + +Y+  I  L R 
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD 277

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            + DEAY   ++M ++   PDVV Y V+I  L  A K+ DAM L + M+     PD   Y
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             L+  F D G LD+   +  E+      P+  TFTIL+  +C+ G +++A  L + M K
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P++  +N LI GL +A  L+ A  LF  ME +G  PT +  +              
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI-------------- 443

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ +  +G   KA +   ++   G  P+I+  N+ +    ++G +  A  +F EL+  
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL PDSVTY  ++    +V + ++A ++  +M +  C P   V  SL             
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL------------- 550

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIW 641
                                I+   + G VE A Q    M  ++ +  LAP    Y I 
Sbjct: 551 ---------------------IDTLYKAGRVEEAWQ----MFCRMEEMNLAPTVVTYNIL 585

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           L GL ++GQ+++A+ +F  +          +   L+  LCK   +DLA+ +F Y +    
Sbjct: 586 LAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMF-YKMTT-M 643

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTK---SLLPGPWNT 758
             RP V  +      F K N+  +A  L  +MK +       L P      +LLPG   +
Sbjct: 644 NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-------LRPDHVTLCTLLPGVIKS 696

Query: 759 REMEN 763
            ++E+
Sbjct: 697 GQIED 701



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/561 (25%), Positives = 253/561 (45%), Gaps = 53/561 (9%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    +  WQ    +   N++     + +L++G  K G  +KA++ F  M  
Sbjct: 548  NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              C P+   +N +L+   +     LAL ++Y+M  +NC P+++TF+ +I+G  K  + + 
Sbjct: 608  HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL---------------FLKMKD 231
            AI +  +M ++ + P+  T   ++ G+ +  + ++A+R+               F +   
Sbjct: 668  AIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVM 726

Query: 232  SGCSPDFVAYNALLNG---------------------FCKLRRVDEALALLRSFEKD-GF 269
             G   +     A+L G                      CK ++   A  +   F K+ G 
Sbjct: 727  GGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGV 786

Query: 270  VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
             P L  Y+ LIDG       + A+  + +M      PD   Y  +I    ++GK+ +   
Sbjct: 787  KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  +M  RG  P+T  YN +I        LD+A  L   +   D  P   TF  LI G+ 
Sbjct: 847  LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
            ++G +DDA ++F+ M   GC P+  ++N L++G  K G ++ A   F +M + G  P   
Sbjct: 907  KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP--- 963

Query: 449  LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                       D  S   +V+  C AG +  A     +L ++G  PD++ YN +ING  +
Sbjct: 964  -----------DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGR 1012

Query: 509  VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
                  AL LF E+Q +G+ PD  TY +LI  L  V   E+A +I+ ++   G  P+   
Sbjct: 1013 SQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFT 1072

Query: 569  YKSLMTWSCRRRKFSLAFSLW 589
            Y +L+          LA+ ++
Sbjct: 1073 YNALIRGYTLSGNSELAYGIY 1093



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 251/547 (45%), Gaps = 60/547 (10%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
             +EL+S  ++  S  + +++  Y KVG  ++A++   +M +  C+PDV + N++++  ++
Sbjct: 497  FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  A  ++  M ++N  P +VT+++L+ GL K G+ + A+++ + M   G  PN  T
Sbjct: 557  AGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTIT 616

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            +  ++  LC+ +  D A ++F KM    C PD + +N +++GF K  ++  A+ L    +
Sbjct: 617  FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676

Query: 266  KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF--------------------EEKIE 305
            K    P   +   L+ G+ ++ + ++A+      F                     E   
Sbjct: 677  K-LLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGT 735

Query: 306  PDVVLYGV----------------MIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNA 348
               +L+G                 +I+ L +  K   A  +     +E G+ P    YN 
Sbjct: 736  EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNL 795

Query: 349  LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            LI GF ++  ++ A +L  E+      P+T T+  LI    ++G +++   L+++M   G
Sbjct: 796  LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG 855

Query: 409  CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK---NPTLFLRLSQG----------- 454
            C P+   +N +I  L K+  L+KA  L+Y +  G     P  F  L  G           
Sbjct: 856  CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915

Query: 455  ---GNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                  VH     + A    +V  Y   G +  A +   ++ + G  PD+ +Y  L++  
Sbjct: 916  EMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975

Query: 507  CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            C  G ++ AL  F++L+  GL PD V Y  +INGL R  R E+A  +F +M   G  P  
Sbjct: 976  CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDL 1035

Query: 567  AVYKSLM 573
              Y SL+
Sbjct: 1036 YTYNSLI 1042



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 173/320 (54%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            V+ +LI G+ +V + E A   F +MK   C PD + YN++++   +         +Y EM
Sbjct: 792  VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM 851

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   C PN +T++++I+ L KS + + A+ +   +      P   T+  +I GL +  R 
Sbjct: 852  LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRL 911

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D+A+ +F  M   GC P+   YN L+NG+ KL  VD A    +   K+G  P L SY+ L
Sbjct: 912  DDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTIL 971

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +D L  A R D+A  ++ K+ +  ++PD+V Y +MI GL  + + ++A+ L  +M+ RGI
Sbjct: 972  VDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGI 1031

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            VPD Y YN+LI     +G++++A  +  E+      PN  T+  LI G   +G  + A  
Sbjct: 1032 VPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYG 1091

Query: 400  LFNKMEKAGCFPSVGMFNAL 419
            ++ KM   GC P+ G F  L
Sbjct: 1092 IYKKMMVGGCDPNTGTFAQL 1111



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/666 (23%), Positives = 290/666 (43%), Gaps = 54/666 (8%)

Query: 32   TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
            T + + + K       F       K+  L +  + + +IS LL+ N  D        + S
Sbjct: 373  TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
              V   +  + +LI  + K G   KALE+F KMK     P++   NA L           
Sbjct: 433  LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            A A++ E+      P+ VT+++++   SK G+ + AIK+L EM++    P+      +I 
Sbjct: 493  AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLID 552

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             L +  R +EA+++F +M++   +P  V YN LL G  K  ++ +A+ L  S    G  P
Sbjct: 553  TLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSP 612

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               +++ L+D L +    D A   + KM      PDV+ +  +I G  +  ++K+A+ L 
Sbjct: 613  NTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLF 672

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQA------------RSLQVEIWK-------- 371
              M++  + PD      L+ G    G ++ A             ++    W+        
Sbjct: 673  HQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILT 731

Query: 372  ----------------RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVG 414
                            R    +      +I  +C++     A+ +F K  K  G  P++ 
Sbjct: 732  EAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLK 791

Query: 415  MFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            ++N LIDG  +   +E A  LF +M+  G  P  F              +  ++++ +  
Sbjct: 792  VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF--------------TYNSLIDAHGK 837

Query: 474  AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            +G I++ + +  ++   G  P+ ITYN +I+   K   ++ A+ L+  L      P   T
Sbjct: 838  SGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCT 897

Query: 534  YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            +G LI+GL +  R +DA  +F  M   GC P+ A+Y  L+    +      A   + + +
Sbjct: 898  FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957

Query: 594  RDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            ++    D +S   + + L   G V++A+    ++     D  L  Y + + GL +  + +
Sbjct: 958  KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTE 1017

Query: 653  EALNIF 658
            EAL++F
Sbjct: 1018 EALSLF 1023



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 185/367 (50%), Gaps = 14/367 (3%)

Query: 174  LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            +I  L K  KT VA  +  + T+  G+ P    Y ++I G  +++  + A+ LF +MK +
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            GC+PD   YN+L++   K  +++E   L       G  P   +Y+ +I  L ++ R D+A
Sbjct: 820  GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879

Query: 293  YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               Y  +      P    +G +I GL ++G++ DA ++   M   G  P++  YN L+ G
Sbjct: 880  MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939

Query: 353  FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            +  LG +D A      + K    P+  ++TIL+  +C  G VDDA   F K+++AG  P 
Sbjct: 940  YGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPD 999

Query: 413  VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
            +  +N +I+GL ++   E+A  LF++M             Q    V D  +  +++    
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEM-------------QNRGIVPDLYTYNSLILNLG 1046

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
              G+I +A KI  +L   G  P++ TYN+LI G+   GN   A  ++K++ + G  P++ 
Sbjct: 1047 IVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTG 1106

Query: 533  TYGTLIN 539
            T+  L N
Sbjct: 1107 TFAQLPN 1113



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%)

Query: 112  GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
            G  + AL  F K+K+    PD+  YN ++N   R Q    AL++++EM     +P++ T+
Sbjct: 979  GRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038

Query: 172  SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
            + LI  L   G  E A K+ +E+   G+ PN FTY  +I G      ++ AY ++ KM  
Sbjct: 1039 NSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMV 1098

Query: 232  SGCSPDFVAYNALLN 246
             GC P+   +  L N
Sbjct: 1099 GGCDPNTGTFAQLPN 1113


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 166/589 (28%), Positives = 285/589 (48%), Gaps = 36/589 (6%)

Query: 87  DELRSGNVSVVSD----VFFVLISG--YYKVGDCEKALESFGKMKEFD-----CQP---- 131
           + LRSG V + +D    +F  +I       V D  +   +  K K++D     C+     
Sbjct: 58  ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117

Query: 132 ----DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
               ++Y  + ++N   R +   LA +   +++KL   PN +TFS LINGL   G+   A
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           ++++D M + G  P+  T   +++GLC   +  EA  L  KM + GC P+ V Y  +LN 
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK  +   A+ LLR  E+         YS +IDGL +    D A+  + +M  + I  +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y ++I G   AG+  D  KLL DM +R I P+   ++ LI  F   G L +A  L  
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  R   P+T T+T LI G C+   +D A ++ + M   GC P++  FN LI+G CKA 
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            ++    LF KM +                V D  +  T+++ +C  G ++ A ++  ++
Sbjct: 418 RIDDGLELFRKMSL-------------RGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                 P+I+TY  L++G C  G    AL++F++++   +  D   Y  +I+G+    + 
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
           +DA+ +F  +P  G  P    Y  ++   C++   S A  L+ +   D    D  +    
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI-WLIGLCQDGQVKEA 654
           I   L  G+   +++ L+E + K   F +   TI  +I +  DG++K++
Sbjct: 585 IRAHLGDGDATKSVK-LIE-ELKRCGFSVDASTIKMVIDMLSDGRLKKS 631



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 170/600 (28%), Positives = 282/600 (47%), Gaps = 67/600 (11%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +M+    LP ++ FS L + ++K+ + ++ + +  +M  +GI  N +T +I+I+
Sbjct: 72  AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  +   A+    K+   G  P+ + ++ L+NG C   RV EAL L+    + G  P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L + + L++GL  + +  EA     KM E   +P+ V YG ++  + ++G+   AM+LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M ER I  D   Y+ +I G C  G LD A +L  E+  +    N  T+ ILI G C  
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G  DD  KL   M K    P+V  F+ LID   K G+L +A  L  +M   G  P     
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP----- 366

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +  ++++ +C    + KA +++  +   G  P+I T+N LING+CK  
Sbjct: 367 ---------DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+  L+LF+++ L+G+  D+VTY TLI G   + +   A  +F +M      P+   YK
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C                      + ES K++E F      E   +  +E+D  +
Sbjct: 478 ILLDGLCD---------------------NGESEKALEIF------EKIEKSKMELDIGI 510

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--------LIHGLCK 682
                  Y I + G+C   +V +A ++F  L        P   VK        +I GLCK
Sbjct: 511 -------YNIIIHGMCNASKVDDAWDLFCSL--------PLKGVKPGVKTYNIMIGGLCK 555

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +G L  A  +F    ++G        N L+R+ L   D  K  +  L+  +K  G+ +DA
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK--SVKLIEELKRCGFSVDA 613



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 175/366 (47%), Gaps = 1/366 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K    D  +   +E+    ++     + +LI G+   G  +   +    M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  ++ +++   ++     A  ++ EM+     P+ +T++ LI+G  K    + 
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M+D M  +G  PN  T+ I+I+G C+ NR D+   LF KM   G   D V YN L+ 
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+L +++ A  L +        P + +Y  L+DGL      ++A   + K+ + K+E 
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+ +Y ++I G+  A KV DA  L   +  +G+ P    YN +I G C  G L +A  L 
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +    P+  T+ ILI     +G    + KL  ++++ G          +ID L   
Sbjct: 567 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SD 625

Query: 427 GELEKA 432
           G L+K+
Sbjct: 626 GRLKKS 631



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 155/370 (41%), Gaps = 58/370 (15%)

Query: 390 RNGMVD----DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           R+G+VD    DA  LF  M  +   P+V  F+ L   + K  + +    L  +ME+    
Sbjct: 61  RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK--- 117

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                        H+  +L  M+  +C    +  A+  + ++ + G  P+ IT+++LING
Sbjct: 118 ----------GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C  G ++ AL+L   +   G +PD +T  TL+NGL    +E +A  +  +M + GC P+
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y  ++   C+  + +LA                       E L+K E         E
Sbjct: 228 AVTYGPVLNVMCKSGQTALAM----------------------ELLRKME---------E 256

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHGLCKRG 684
            + KL+  +   Y+I + GLC+ G +  A N+F+ + E K I T       LI G C  G
Sbjct: 257 RNIKLDAVK---YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAG 312

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
             D    +    +K    + P V  + +    F K+ K   A  L   M   G   D   
Sbjct: 313 RWDDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370

Query: 745 YPKTKSLLPG 754
           Y    SL+ G
Sbjct: 371 YT---SLIDG 377


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 235/454 (51%), Gaps = 31/454 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    P +  +N +L+    +     AL ++++M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN+VTF+ L+NGL + G+   A+ +LD M + G+ PN+ TY  ++ G+C++    
Sbjct: 77  ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   PD V Y+A+++G  K  R  +A  L    +  G  P + +YSC+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G   + ++ EA    ++M   KI PDVV +  +I  L + G +  A  LL +M   G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 340 VPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSL-------PNTHTFTILICGM 388
            P+    N L+ G CD G L  A    +++Q  +   D+        P+  T+ ILI G+
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTL 447
              G   +A++L+ +M   G  P    ++++I+GLCK   L++A  +F  M     +P +
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          +  T++  YC AG++    ++  ++   G + + ITY +LI GF 
Sbjct: 374 --------------VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           KVGNING+L +F+E+   G+ PD++T   ++ GL
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 239/478 (50%), Gaps = 31/478 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D+Y +N ++           AL+ + ++ KL   P +VTF+ L++GL    +   A+ + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +M +    PN  T+T +++GLC+  R  EA  L  +M + G  P+ + Y  +++G CK+
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 252 RRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
                AL LLR  E+   + P +  YS +IDGL++  R+ +A   + +M ++ I PD+V 
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  MI G   +GK  +A +LL +M  R I PD   ++ LI      G L+ A+ L  E+ 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-----------GCFPSVGMFNAL 419
                PN  T   L+ G+C +G + DA ++F  M+K+           G  P V  +N L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I GL   G+  +A  L+ +M     P   +        V D  +  +M+   C    + +
Sbjct: 310 ISGLINEGKFLEAEELYEEM-----PHRGI--------VPDTVTYSSMINGLCKQSRLDE 356

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A ++   +      P+I+T+N+LI G+CK G ++  L+LF E+  +G+  +++TY TLI 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWLQYLRD 595
           G ++V     +  IF +M  +G  P     ++++T  WS    K +LA    LQ   D
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMD 474



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 218/440 (49%), Gaps = 33/440 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ G        +AL+ F +M    C+P+V  +  ++N   R+   + A+A+   M
Sbjct: 52  TFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 107

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINR 218
           V+    PN +T+  +++G+ K G T  A+ +L +M +   I P+   Y+ +I GL +  R
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A  LF++M+D G  PD V Y+ ++NGFC   +  EA  LL+        P + ++S 
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-- 336
           LI+ L +    + A    ++M    + P+VV    ++ GL ++GK+KDA+++   M++  
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 337 ---------RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                     G+ PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+   +D+A ++F+ M      P++  FN LI G CKAG ++    LF +M        
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM-------- 399

Query: 448 FLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  G R  V +  +  T++  +   G I+ +  I  ++  SG  PD IT  +++ G
Sbjct: 400 -------GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 506 FCKVGNINGALKLFKELQLK 525
                 +  AL + +ELQ+ 
Sbjct: 453 LWSKEELKKALAMLEELQMS 472



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 180/360 (50%), Gaps = 12/360 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  ++ G  K+GD   AL    KM+E    +PDV IY+A+++  ++      A  ++ E
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      P+IVT+S +ING   SGK   A ++L EM  R I P+  T++ +I+ L +   
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-----------D 267
            + A  L  +M  SG  P+ V  N LL+G C   ++ +AL + ++ +K           +
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ LI GL    ++ EA   Y +M    I PD V Y  MI GL +  ++ +A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            ++   M  +   P+   +N LI G+C  G++D    L  E+ +R  + N  T+  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             + G ++ +  +F +M  +G +P       ++ GL    EL+KA  +  ++++  +  L
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMDHHL 477



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 203/477 (42%), Gaps = 43/477 (9%)

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +I  D+  + ++I+      K+  A+     + + G  P    +N L+ G C    ++  
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC----VEDR 65

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            S  ++++ +   PN  TFT L+ G+CR G V +A  L ++M + G  P+   +  ++DG
Sbjct: 66  VSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           +CK G+   A  L  KME            +  +   D      +++     G    A  
Sbjct: 126 MCKMGDTVSALNLLRKME------------ELSHIKPDVVIYSAIIDGLWKDGRHTDAQN 173

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           + +++ + G  PDI+TY+ +INGFC  G  + A +L +E+ ++ + PD VT+  LIN L 
Sbjct: 174 LFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV 233

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-D 601
           +      A  +  +M  +G  P+     +L+   C   K   A  ++    + +   D  
Sbjct: 234 KEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293

Query: 602 ESMKSIEEFLQKGEVENAIQGLL-------------EMDFKLNDFQLAPYTIWLIGLCQD 648
            +   +E  +Q   +   I GL+             EM  +        Y+  + GLC+ 
Sbjct: 294 HAFNGVEPDVQTYNI--LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++ EA  +F  +          +   LI G CK G +D  +++F    + G +      
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT---KSLLPGPWNTREME 762
             L+R   F K      +  +   M S G      +YP T   +++L G W+  E++
Sbjct: 412 ITLIRG--FRKVGNINGSLDIFQEMISSG------VYPDTITIRNMLTGLWSKEELK 460



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L K +  D   Q  D + S + S     F  LI+GY K G  +  LE F +M  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLL-ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                +   Y  ++   FRK   +  +L ++ EM+     P+ +T   ++ GL    + +
Sbjct: 402 RGIVANAITYITLIR-GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 460

Query: 186 VAIKMLDEM 194
            A+ ML+E+
Sbjct: 461 KALAMLEEL 469


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 255/527 (48%), Gaps = 18/527 (3%)

Query: 48  FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           F+    +  R RL  F   S + S++ +   +DL      ++    ++       ++I+ 
Sbjct: 60  FQEMTRSRPRPRLIDF---SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
             +      A  + GK+ +   +PD   ++ ++N    +     AL +   MV++   P 
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           ++T + L+NGL  +GK   A+ ++D M + G  PN+ TY  V+  +C+  +   A  L  
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           KM++     D V Y+ +++G CK   +D A  L    E  GF   +  Y+ LI G   A 
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R+D+     R M + KI PDVV +  +I    + GK+++A +L  +M +RGI PDT  Y 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +LI GFC    LD+A  +   +  +   PN  TF ILI G C+  ++DD  +LF KM   
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQT 466
           G       +N LI G C+ G+LE A  LF +M                 RV  D  S + 
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMV--------------SRRVRPDIVSYKI 462

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C  G   KA +I  ++ +S    DI  YN +I+G C    ++ A  LF  L LKG
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           ++PD  TY  +I GL +     +A  +F +M ++G +P+   Y  L+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 167/629 (26%), Positives = 282/629 (44%), Gaps = 89/629 (14%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRS 91
           SV+ +TK     +   +   K+  L+  A N   +S+++    +     L +  + ++  
Sbjct: 80  SVVARTKQ----YDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIK 135

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
                 +  F  LI+G    G   +ALE   +M E   +P +   NA++N          
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ +   MV+    PN VT+  ++  + KSG+T +A+++L +M +R I  +   Y+I+I 
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+    D A+ LF +M+  G   D + Y  L+ GFC   R D+   LLR   K    P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY-------------------- 311
            + ++S LID   +  +  EA   +++M +  I PD V Y                    
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375

Query: 312 ---------------GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
                           ++I G  +A  + D ++L   M  RG+V DT  YN LI+GFC+L
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA--------- 407
           G L+ A+ L  E+  R   P+  ++ IL+ G+C NG  + A ++F K+EK+         
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495

Query: 408 --------------------------GCFPSVGMFNALIDGLCKAGELEKANLLFYKME- 440
                                     G  P V  +N +I GLCK G L +A+LLF KME 
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555

Query: 441 IGKNPT-----LFLRLSQGGNRVHDKASLQTMVEQ---YCTAGLIHKAYKILMQLAESGN 492
            G +P      + +R   G       A L   +++      A  +  A   L ++ ++G+
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGH 615

Query: 493 LPDIITYNSLINGFC--KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            PD+ T+ +L+  FC  +  ++  A  LFK ++  G +P+ VTY T+I GL   +     
Sbjct: 616 EPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQV 675

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +  QM + GC P+     + ++  C++
Sbjct: 676 PGVLDQMFERGCQPNAVTKSTFISGLCKQ 704



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 15/476 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A++ F +M     +P +  ++ + ++  R + + L L +  +M       N+ T S++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN   +  K  +A   + ++ + G  P+  T++ +I+GLC   R  EA  L  +M + G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  +  NAL+NG C   +V +A+ L+    + GF P   +Y  ++  + ++ +   A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             RKM E KI+ D V Y ++I GL + G + +A  L ++M  +G   D   Y  LI+GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G  D    L  ++ KR   P+   F+ LI    + G + +A++L  +M + G  P   
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-GNRVHDKASLQTMVEQYCT 473
            + +LIDG CK  +L+KAN +           L L +S+G G  +    +   ++  YC 
Sbjct: 354 TYTSLIDGFCKENQLDKANHM-----------LDLMVSKGCGPNIR---TFNILINGYCK 399

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           A LI    ++  +++  G + D +TYN+LI GFC++G +  A +LF+E+  + +RPD V+
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           Y  L++GL      E A  IF ++ ++       +Y  ++   C   K   A+ L+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 260/571 (45%), Gaps = 36/571 (6%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +  EMT+    P    ++ + S + +  + D    L  +M+  G + +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N  C+ R++  A + +    K G+ P   ++S LI+GL    R  EA     +M E 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +P ++    ++ GL   GKV DA+ L+  M E G  P+   Y  ++K  C  G    A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++ +R    +   ++I+I G+C++G +D+A  LFN+ME  G    + ++  LI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            C AG  +    L   M I +  T             D  +   +++ +   G + +A +
Sbjct: 292 FCYAGRWDDGAKLLRDM-IKRKIT------------PDVVAFSALIDCFVKEGKLREAEE 338

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  ++ + G  PD +TY SLI+GFCK   ++ A  +   +  KG  P+  T+  LING  
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           + +  +D   +F +M   G       Y +L+   C   K  +A  L+ + +      D  
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458

Query: 603 SMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           S K + + L   GE E A++   +++    +  +  Y I + G+C   +V +A ++F  L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518

Query: 662 VECKAIVTPPSCVK--------LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--L 711
                   P   VK        +I GLCK+G L  A  +F    ++G    P  C Y  L
Sbjct: 519 --------PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH--SPNGCTYNIL 568

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +R+ L   D  K  +  L+  +K  G+ +DA
Sbjct: 569 IRAHLGEGDATK--SAKLIEEIKRCGFSVDA 597



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 24/363 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I    K N  D     LD + S         F +LI+GY K    +  LE F KM  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D   YN ++          +A  ++ EMV     P+IV++ +L++GL  +G+ E 
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ +++ +  +  +   Y I+I G+C  ++ D+A+ LF  +   G  PD   YN ++ 
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI-------DGLFRAKRYDE-------- 291
           G CK   + EA  L R  E+DG  P   +Y+ LI       D    AK  +E        
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595

Query: 292 -------AYAWYRKMFEEKIEPDVVLYGVMIRG--LSEAGKVKDAMKLLSDMRERGIVPD 342
                  A +   +M +   EPDV  +  ++R   L E   V DA  L  +M+  G  P+
Sbjct: 596 DASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPN 655

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +IKG  +  ++ Q   +  ++++R   PN  T +  I G+C+  +   A  L  
Sbjct: 656 VVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLR 715

Query: 403 KME 405
           KME
Sbjct: 716 KME 718



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 182/409 (44%), Gaps = 24/409 (5%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KRK      + SA+I   +K        +   E+    +S  +  +  LI G+ K    +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA      M    C P++  +N ++N   +  L    L ++ +M     + + VT++ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G  + GK EVA ++  EM  R + P+  +Y I++ GLC     ++A  +F K++ S   
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            D   YN +++G C   +VD+A  L  S    G  P + +Y+ +I GL +     EA   
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549

Query: 296 YRKMFEEKIEPDVVLYGVMIR---------------------GLS-EAGKVKDAMKLLSD 333
           +RKM E+   P+   Y ++IR                     G S +A  ++ A+  L+ 
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLAR 609

Query: 334 MRERGIVPDTYCYNALIKGFC--DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           M + G  PD + +  L++ FC  +   +  A +L   +      PN  T+  +I G+   
Sbjct: 610 MLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNG 669

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            M+     + ++M + GC P+    +  I GLCK      A LL  KME
Sbjct: 670 NMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 88/248 (35%), Gaps = 24/248 (9%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
           P+     F    K K        + +I  +   +  D  W     L    V      + +
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL----------------------N 141
           +I G  K G   +A   F KM+E    P+   YN ++                       
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING--LSKSGKTEVAIKMLDEMTQRGI 199
            +        AL+    M+K    P++ TF+ L+    L ++     A  +   M   G 
Sbjct: 593 FSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGY 652

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            PN  TY  VI GL   N   +   +  +M + GC P+ V  +  ++G CK      A+ 
Sbjct: 653 KPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAIL 712

Query: 260 LLRSFEKD 267
           LLR  E D
Sbjct: 713 LLRKMEND 720


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 246/497 (49%), Gaps = 13/497 (2%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LR   VSV  +    L+ G  + G  + A E +G++     + +VY  N ++N   + + 
Sbjct: 213 LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRK 272

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F   +    +M       +IVT++ LIN   + G  E A ++L+  + RG+ P   TY  
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ GLC+I + D A  + ++M   G +P+   YN LL   C+   + EA  +     + G
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P L S+S LI  L R     +A   +R+M    I PD V+Y ++I G    G + DA+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M  RG   D   YN  + G C   +   A  L  E+ +R  +P+ +TFT LI G 
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C++G +D A  LF  M +    P    +N LIDG CKAGE+ +A  L+  M I K+    
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM-IRKDI--- 568

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    + D  S  T++  +C++GL+ +A  +  Q+ E G  P+++T N+LI G+C+
Sbjct: 569 ---------IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G++  A +   ++   G+ PDS +Y TLI+G  +    E AF +  +M + G   +   
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 569 YKSLMTWSCRRRKFSLA 585
           Y  ++   C   K   A
Sbjct: 680 YNLILNGFCAEGKMQEA 696



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 263/588 (44%), Gaps = 50/588 (8%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           G+V ++ D+   L+  Y +     +  E+F  ++       +   N +L    R     L
Sbjct: 184 GSVGLIYDL---LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +Y E+V+     N+ T ++++N L K  K E  +  L +M  +G+  +  TY  +I+
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+    +EA++L       G  P  + YNA+L G CK+ + D A  +L    + G  P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ L+  + R     EA   + +M    + PD+V +  +I  L+  G +  A+   
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M   GIVPD   Y  LI GFC  G L  A  ++ E+  R    +  T+   + G+C+ 
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            M  DA  LFN+M + G  P    F  LI G CK G ++KA  LF  M         +R 
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM---------VRT 531

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N   DK +  T+++ +C AG + +A ++   +     +PD I+Y +++NGFC  G 
Sbjct: 532 ----NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL L  ++  KG+RP+ VT  TLI G  R      A+    +M  NG  P    Y +
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L                                  I+ +L++  +E A   + EM+ +  
Sbjct: 648 L----------------------------------IDGYLKEANLEKAFILINEMEKRGL 673

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            F +  Y + L G C +G+++EA  +   ++E        +   LI+G
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 218/461 (47%), Gaps = 48/461 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G  K+G  ++A +   +M +    P+   YN +L    R+   L A  ++ EM +  
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LP++V+FS LI  L+++G    A+    EM + GI+P+   YTI+I G C+     +A 
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++  +M   GC  D V YN  LNG CK +   +A  L     + G VP   +++ LI G 
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +    D+A   +  M    ++PD V Y  +I G  +AG++  A +L  DM  + I+PD 
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  ++ GFC  GLL +A +L  ++ ++   PN  T   LI G CR+G +  A +  +K
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M   G  P    +N LIDG  K   LEKA +L  +ME                    K  
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME--------------------KRG 672

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
           LQ                             +IITYN ++NGFC  G +  A ++ +++ 
Sbjct: 673 LQF----------------------------NIITYNLILNGFCAEGKMQEAEQVLRKMI 704

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             G+ PD  TY +LING    D  ++AFR   +M Q G  P
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 239/561 (42%), Gaps = 25/561 (4%)

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y +++    Q  +  E    F  ++  G S    A N LL G  +   VD A  +     
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G    + + + +++ L + ++++    +   M  + +  D+V Y  +I      G V+
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +LL+    RG+ P    YNA++ G C +G  D+A+ + +E+ +    PN  T+  L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +CR   + +AQ++F++M + G  P +  F++LI  L + G L +A + F +ME     
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME----- 424

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                       V D      +++ +C  G +  A K+  ++   G   D++TYN+ +NG
Sbjct: 425 --------RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK      A  LF E+  +G+ PD  T+ TLI G  +    + A  +F  M +    P 
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKG---EVENAIQ 621
              Y +L+   C+  +   A  LW   +R     D  S  ++   F   G   E  N   
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
            +LE   + N   L      + G C+ G + +A    S ++    I    S   LI G  
Sbjct: 597 QMLEKGIRPN---LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           K   L+ A  +     K G        N +L    F  + K   A  +L +M  +G + D
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNG--FCAEGKMQEAEQVLRKMIEIGINPD 711

Query: 742 ACLYPKTKSLLPGPWNTREME 762
              Y    SL+ G  +   M+
Sbjct: 712 GATY---SSLINGHVSQDNMK 729



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    +R  +  F + + +I    K    D      + +   N+      +  LI G+ 
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G+  +A E +  M   D  PD   Y  VLN      L   AL +  +M++    PN+V
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T + LI G  +SG    A + L +M   GI+P+ F+Y  +I G  +    ++A+ L  +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +  G   + + YN +LNGFC   ++ EA  +LR   + G  P   +YS LI+G       
Sbjct: 669 EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM 728

Query: 290 DEAYAWYRKMFEEKIEPD 307
            EA+ ++ +M +  + PD
Sbjct: 729 KEAFRFHDEMLQRGLVPD 746


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 274/574 (47%), Gaps = 35/574 (6%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR 61
           SS  N  L+ L T +   P+  P + F  +   T  +  T        FF    +     
Sbjct: 12  SSIRNSNLSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTATH----ALHFFHLMMRSTPTP 67

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S +S + ++S L K   +   +   +++R   +S       +L++    V    +   +F
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +      P++  YN ++     +     A  ++  M KL C P++VT+  LI GL  +
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187

Query: 182 GKTEVAIKMLDEMT------QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK----- 230
           G   +A+K+  EM       +    PN  TY I++ GLC++ R DEA +LF +MK     
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 231 -----DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
                D G  PD V +N L++  CK  +V EA  LL    + G VP L +Y+ LI+G   
Sbjct: 248 PNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCM 307

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               + A   +  M  +  EPDV+ Y V+I G S+  KV++AMKL ++M   G  P+   
Sbjct: 308 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y++L+KG    G +D A+ L   +       N++T+ I + G+C+N  + +A KLF +++
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
            +     +   N LIDGLCKAG+LE A  LF K+   G  P +               + 
Sbjct: 428 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV--------------VTY 473

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             M+  +C  G + KA  ++ ++  +G  PDIITYN+L+ GF +   +   ++L   +  
Sbjct: 474 TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ 533

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           K + PD++T   +++ L + ++ ++   +  + P
Sbjct: 534 KDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFP 567



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 246/486 (50%), Gaps = 38/486 (7%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F  M      P +  +N +L+   + + +    ++Y +M       +  T ++L+N
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L    +          + +RG  PN  TY  +I GLC  +R  EA RLFL+M+  GC+P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKD------GFVPRLGSYSCLIDGLFRAKRYD 290
           D V Y  L+ G C    ++ AL L +    D         P + +Y+ ++DGL +  R D
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 291 EAYAWYR----------KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           EA   +           +M ++ ++PD+V + V+I  L + GKV +A KLL  M E GIV
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 292

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN+LI+GFC +G L+ AR L V +  +   P+  ++ +LI G  +   V++A KL
Sbjct: 293 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 352

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-----------------IGK 443
           +N+M   G  P+V  +++L+ G+  AG+++ A  LF  M+                 + K
Sbjct: 353 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCK 412

Query: 444 NPTLFLRLS-----QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           N  LF  +      +  N   +  +L  +++  C AG +  A+++  +L+  G+ P+++T
Sbjct: 413 NDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVT 472

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  +I+GFC+ G ++ A  L ++++  G  PD +TY TL+ G    ++ E+  ++  +M 
Sbjct: 473 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 532

Query: 559 QNGCTP 564
           Q   +P
Sbjct: 533 QKDVSP 538



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 32/454 (7%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A  A   F  M  S  +P   ++N LL+G  K++   +  +L       G      + + 
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++ L    R  E +A +  +      P++V Y  +I+GL    ++ +A +L   M++ G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEI------WKRDSLPNTHTFTILICGMCRNG 392
             PD   Y  LIKG C  G ++ A  L  E+      ++ +  PN  T+ I++ G+C+ G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 393 MVDDAQKLFNKMEKAGCFPS----------VGMFNALIDGLCKAGE-LEKANLLFYKMEI 441
             D+A++LF +M+  G  P+          +  FN LID LCK G+ +E   LL   +E 
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P              D  +  +++E +C  G ++ A ++ + +   G  PD+I+YN 
Sbjct: 290 GIVP--------------DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 335

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           LING+ K   +  A+KL+ E+ L G RP+ +TY +L+ G+    + +DA ++F  M  +G
Sbjct: 336 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 395

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAI 620
              +   Y   +   C+      A  L+ +        + E++   I+   + G++E A 
Sbjct: 396 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 455

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
           +   ++  + ++  +  YTI + G C++GQV +A
Sbjct: 456 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 489



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 242/523 (46%), Gaps = 52/523 (9%)

Query: 249 CKLRRVD--EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           CK   V    AL       +    P L S++ L+ GL + K Y + ++ Y +M    +  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D     +++  L    ++++     + +  RG  P+   YN LIKG C    + +A  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM------EKAGCFPSVGMFNALI 420
           + + K    P+  T+  LI G+C  G ++ A KL  +M       +  C P+V  +N ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 421 DGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           DGLCK G  ++A  LF +M+  G  P   L   QG     D  +   +++  C  G + +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEML--DQGLQP--DMVTFNVLIDTLCKEGKVIE 278

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A K+L  + ESG +PD++TYNSLI GFC VG++N A +LF  +  KG  PD ++Y  LIN
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 338

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  +  + E+A +++ +M   G  P+   Y SL+              ++L      +G+
Sbjct: 339 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLK------------GIFL------AGK 380

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            D++ K        G  EN+                  Y I+L GLC++  + EA+ +F+
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYT----------------YGIFLDGLCKNDCLFEAMKLFT 424

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            L      +   +   LI GLCK G L+ A ++F      G    P V  Y +    F +
Sbjct: 425 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH--EPNVVTYTIMIHGFCR 482

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
           + +   A  L+ +M++ G   D   Y    +L+ G + + ++E
Sbjct: 483 EGQVDKANVLIQKMEANGCTPDIITY---NTLMRGFYESNKLE 522



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 181/408 (44%), Gaps = 53/408 (12%)

Query: 89  LRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKM------KEFDCQPDVYIYNAVL 140
           LR   +    DV  +  LI G    G+   AL+   +M       E +C+P+V  YN ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 141 NIAFR-------KQLF---LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           +   +       KQLF        +  EM+     P++VTF++LI+ L K GK   A K+
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M + GI+P+  TY  +I G C +   + A  LF+ M   GC PD ++YN L+NG+ K
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             +V+EA+ L       G  P + +Y  L+ G+F A + D+A   +  M    I  +   
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402

Query: 311 YGV-----------------------------------MIRGLSEAGKVKDAMKLLSDMR 335
           YG+                                   +I GL +AGK++ A +L   + 
Sbjct: 403 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLS 462

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G  P+   Y  +I GFC  G +D+A  L  ++      P+  T+  L+ G   +  ++
Sbjct: 463 NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLE 522

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           +  +L ++M +    P     + ++D L K  + ++   L  +  I K
Sbjct: 523 EVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 175/682 (25%), Positives = 316/682 (46%), Gaps = 67/682 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
           LS   V  ++   KNP      F       R   ++    V   +LK    P       +
Sbjct: 8   LSPKRVIKLLKSEKNPHSALSIF---DSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSR 64

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIA 143
            ++ +R+       DV   +I  Y K    ++AL+ F +M E F CQP +  YN++LN  
Sbjct: 65  IVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNAL 124

Query: 144 FRKQLFLLALA--VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                +  A +  +Y+E + L+  PN+ T+++LI    +  + + A ++L+ M ++G  P
Sbjct: 125 IESNKWDEAESFFLYFETMGLS--PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSP 182

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + F+Y  +I+ L +     +A +LF +M + G +PD   YN L++GF K   +  A  + 
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 262 RSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
               K   V P + SY+ +I+GL +  ++DE++  + +M + +   D+  Y  +I GL  
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK---RDSLPN 377
           +G +  A ++  +M E G+ PD   YN ++ G+   G +++     +E+WK   ++    
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC----LELWKVMEKEGCRT 358

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             ++ ILI G+  N  VD+A  ++  + +  C      +  L+ GLCK G L KA  +  
Sbjct: 359 VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 418

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + E G+                D  +  +M+   C  G + +   +L Q+ + G  P+  
Sbjct: 419 EAENGRGDL-------------DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
             N++INGF +   +  AL+ F  +  KG  P  VTY TLINGL + +R  +A+ +  +M
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              G  P+   Y  LM   C+ +K  +A +LW Q                   L+KG   
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA------------------LEKG--- 564

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
                  + D K+       + I + GLC  G+V++AL ++S + + K +    +   L+
Sbjct: 565 ------FKPDVKM-------HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611

Query: 678 HGLCKRGYLDLAMDVFLYTLKN 699
            G  K    + A  ++ + L++
Sbjct: 612 EGFYKVRDFERASKIWDHILQS 633



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 248/505 (49%), Gaps = 52/505 (10%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    LI+   K G    AL+ F +M E    PDV  YN +++  F+K   L A  ++
Sbjct: 183 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 242

Query: 157 YEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
             ++K  +  PNI +++++INGL K GK + + ++   M +     + +TY+ +I GLC 
Sbjct: 243 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               D A R++ +M ++G SPD V YN +LNG+ +  R++E L L +  EK+G    + S
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVS 361

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI GLF   + DEA + +  + E+    D + YGV++ GL + G +  A+ +L +  
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
                 DT+ Y+++I G C  G LD+   +  ++ K    PN H    +I G  R   ++
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           DA + F  M   GCFP+V  +N LI+GL KA                       R S+  
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAE----------------------RFSE-- 517

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                                   AY ++ ++   G  P++ITY+ L+NG C+   ++ A
Sbjct: 518 ------------------------AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L L+ +   KG +PD   +  +I+GL    + EDA +++ +M Q  C P+   + +LM  
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEG 613

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRD 600
             + R F  A  +W   L+  S  +
Sbjct: 614 FYKVRDFERASKIWDHILQSWSSSN 638



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 207/458 (45%), Gaps = 17/458 (3%)

Query: 290 DEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           D+A   +++M E    +P +  Y  ++  L E+ K  +A          G+ P+   YN 
Sbjct: 95  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 154

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LIK  C     D+A+ L   +W++   P+  ++  LI  + +NG + DA KLF++M + G
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 214

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  +N LIDG  K G++  A+             ++ RL +G +   +  S   M+
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNAS------------EIWERLLKGPSVYPNIPSYNVMI 262

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G   ++++I  ++ ++    D+ TY++LI+G C  GN++GA +++KE+   G+ 
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD V Y T++NG  R  R E+   ++  M + GC  +   Y  L+       K   A S+
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381

Query: 589 W-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           W L   +D           +    + G +  A+  L E +    D     Y+  + GLC+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           +G++ E   +   + +      P  C  +I+G  +   L+ A+  F   +  G       
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 501

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N L+  L  SK  +   AY L+  M   G+  +   Y
Sbjct: 502 YNTLINGL--SKAERFSEAYALVKEMLHKGWKPNMITY 537



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 158/297 (53%), Gaps = 4/297 (1%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W+ ++  + G  +VVS  + +LI G ++    ++A+  +  + E DC  D   Y  +++ 
Sbjct: 348 WKVME--KEGCRTVVS--YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 403

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +      AL++  E        +   +S +INGL + G+ +    +LD+MT+ G  PN
Sbjct: 404 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 463

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
                 VI+G  + ++ ++A R F  M   GC P  V YN L+NG  K  R  EA AL++
Sbjct: 464 PHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 523

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G+ P + +YS L++GL + K+ D A   + +  E+  +PDV ++ ++I GL  +G
Sbjct: 524 EMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 583

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           KV+DA++L S+M++R  VP+   +N L++GF  +   ++A  +   I +  S  N +
Sbjct: 584 KVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 235/454 (51%), Gaps = 31/454 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  +        AL +FGK+ +    P +  +N +L+    +     AL ++++M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN+VTF+ L+NGL + G+   A+ +LD M + G+ PN+ TY  ++ G+C++    
Sbjct: 77  ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 221 EAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A  L  KM++ S   PD V Y+A+++G  K  R  +A  L    +  G  P + +YSC+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G   + ++ EA    ++M   KI PDVV +  +I  L + G +  A  LL +M   G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 340 VPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSL-------PNTHTFTILICGM 388
            P+    N L+ G CD G L  A    +++Q  +   D+        P+  T+ ILI G+
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTL 447
              G   +A++L+ +M   G  P    ++++I+GLCK   L++A  +F  M     +P +
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          +  T++  YC AG++    ++  ++   G + + ITY +LI GF 
Sbjct: 374 --------------VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFR 419

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           KVGNING+L +F+E+   G+ PD++T   ++ GL
Sbjct: 420 KVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 239/478 (50%), Gaps = 31/478 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D+Y +N ++           AL+ + ++ KL   P +VTF+ L++GL    +   A+ + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +M +    PN  T+T +++GLC+  R  EA  L  +M + G  P+ + Y  +++G CK+
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 252 RRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
                AL LLR  E+   + P +  YS +IDGL++  R+ +A   + +M ++ I PD+V 
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  MI G   +GK  +A +LL +M  R I PD   ++ LI      G L+ A+ L  E+ 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-----------GCFPSVGMFNAL 419
                PN  T   L+ G+C +G + DA ++F  M+K+           G  P V  +N L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I GL   G+  +A  L+ +M     P   +        V D  +  +M+   C    + +
Sbjct: 310 ISGLINEGKFLEAEELYEEM-----PHRGI--------VPDTVTYSSMINGLCKQSRLDE 356

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A ++   +      P+I+T+N+LI G+CK G ++  L+LF E+  +G+  +++TY TLI 
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIR 416

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWLQYLRD 595
           G ++V     +  IF +M  +G  P     ++++T  WS    K +LA    LQ   D
Sbjct: 417 GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMD 474



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 218/440 (49%), Gaps = 33/440 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ G        +AL+ F +M    C+P+V  +  ++N   R+   + A+A+   M
Sbjct: 52  TFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM 107

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINR 218
           V+    PN +T+  +++G+ K G T  A+ +L +M +   I P+   Y+ +I GL +  R
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A  LF++M+D G  PD V Y+ ++NGFC   +  EA  LL+        P + ++S 
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-- 336
           LI+ L +    + A    ++M    + P+VV    ++ GL ++GK+KDA+++   M++  
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 337 ---------RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                     G+ PD   YN LI G  + G   +A  L  E+  R  +P+T T++ +I G
Sbjct: 288 MDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMING 347

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +C+   +D+A ++F+ M      P++  FN LI G CKAG ++    LF +M        
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEM-------- 399

Query: 448 FLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  G R  V +  +  T++  +   G I+ +  I  ++  SG  PD IT  +++ G
Sbjct: 400 -------GRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 506 FCKVGNINGALKLFKELQLK 525
                 +  AL + +ELQ+ 
Sbjct: 453 LWSKEELKRALAMLEELQMS 472



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 180/360 (50%), Gaps = 12/360 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  ++ G  K+GD   AL    KM+E    +PDV IY+A+++  ++      A  ++ E
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      P+IVT+S +ING   SGK   A ++L EM  R I P+  T++ +I+ L +   
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-----------D 267
            + A  L  +M  SG  P+ V  N LL+G C   ++ +AL + ++ +K           +
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ LI GL    ++ EA   Y +M    I PD V Y  MI GL +  ++ +A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            ++   M  +   P+   +N LI G+C  G++D    L  E+ +R  + N  T+  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             + G ++ +  +F +M  +G +P       ++ GL    EL++A  +  ++++  +  L
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMDHHL 477



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 203/477 (42%), Gaps = 43/477 (9%)

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +I  D+  + ++I+      K+  A+     + + G  P    +N L+ G C    ++  
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLC----VEDR 65

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            S  ++++ +   PN  TFT L+ G+CR G V +A  L ++M + G  P+   +  ++DG
Sbjct: 66  VSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           +CK G+   A  L  KME            +  +   D      +++     G    A  
Sbjct: 126 MCKMGDTVSALNLLRKME------------ELSHIKPDVVIYSAIIDGLWKDGRHTDAQN 173

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           + +++ + G  PDI+TY+ +INGFC  G  + A +L +E+ ++ + PD VT+  LIN L 
Sbjct: 174 LFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV 233

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-D 601
           +      A  +  +M  +G  P+     +L+   C   K   A  ++    + +   D  
Sbjct: 234 KEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDAT 293

Query: 602 ESMKSIEEFLQKGEVENAIQGLL-------------EMDFKLNDFQLAPYTIWLIGLCQD 648
            +   +E  +Q   +   I GL+             EM  +        Y+  + GLC+ 
Sbjct: 294 HAFNGVEPDVQTYNI--LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++ EA  +F  +          +   LI G CK G +D  +++F    + G +      
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKT---KSLLPGPWNTREME 762
             L+R   F K      +  +   M S G      +YP T   +++L G W+  E++
Sbjct: 412 ITLIRG--FRKVGNINGSLDIFQEMISSG------VYPDTITIRNMLTGLWSKEELK 460



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L K +  D   Q  D + S + S     F  LI+GY K G  +  LE F +M  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLL-ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                +   Y  ++   FRK   +  +L ++ EM+     P+ +T   ++ GL    + +
Sbjct: 402 RGIVANAITYITLIR-GFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 460

Query: 186 VAIKMLDEM 194
            A+ ML+E+
Sbjct: 461 RALAMLEEL 469


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 306/627 (48%), Gaps = 21/627 (3%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLING 177
           F +M E    PDV+ YNA++     ++    AL +   M      NC PN+V+++ +I+G
Sbjct: 150 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDG 209

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             K G+ + A  +  EM  +G+ P+  TY  +I GLC+    D+A  +   M D G  PD
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              YN ++ G+C L +++EA+ LL+     G  P + +YS LI    +  R  EA + + 
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M  +  +P+  +Y +++ G +  G + D   LL  M   GI  +   +N LI  +   G
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +D+A +   E+ +    P+  +++ +I  +C+ G V+DA   FN+M   G  P++  F 
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFT 449

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGL 476
           +LI GLC  GE +K   L ++M           +++G   +H D   + T+++  C  G 
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEM-----------INRG---IHPDAIFMNTIMDNLCKEGR 495

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A      +   G  PD+++YN+LI+G+C VG ++ ++K    +   GLRPDS TY +
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RD 595
           L+NG  +  R EDA  ++ +M +            ++    +  +   A  L+++ + R 
Sbjct: 556 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRG 615

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
              R +     +    +   V+ A++   ++  K  +  +  ++I +  L + G++ EA 
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAK 675

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           ++FS +V    +    +   +I    + G L+ + ++FL   KNG      + N ++R L
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRL 735

Query: 716 LFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           L   D ++   Y  L ++    + L+A
Sbjct: 736 LEKGDVRRAGTY--LTKIDEKNFSLEA 760



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 283/630 (44%), Gaps = 70/630 (11%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKE---FDCQP 131
           +  D+ ++ + EL         DVF    LI G       ++ALE    M     ++C P
Sbjct: 144 DAMDMVFRRMPEL-----GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSP 198

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +V  YN V++  F++     A  +++EM+     P++VT++ LI+GL K+   + A+ +L
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAIL 258

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             M  +G++P+  TY I+I G C + + +EA RL  KM  SG  PD V Y+ L+  +CK+
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKI 318

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGL----------------------FRAKRY 289
            R  EA ++  S  + G  P    Y  L+ G                       F  + +
Sbjct: 319 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 378

Query: 290 -------------DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
                        D+A   + +M +  + PDVV Y  +I  L + G+V+DA+   + M  
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P+   + +LI G C +G   +   L  E+  R   P+      ++  +C+ G V +
Sbjct: 439 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 498

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT--LFLRLSQ 453
           AQ  F+ +   G  P V  +N LIDG C  G+++++     +M  IG  P    +  L  
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558

Query: 454 G---GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           G     RV D  +L                  M+     AG I  A ++ M++ + G   
Sbjct: 559 GYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQL 618

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            I TYN+++ G C+   ++ AL++F++L+ K    D  T+  +IN L +V R ++A  +F
Sbjct: 619 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLF 678

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQK 613
             M   G  P    Y  ++           + +L+L   ++    D   +  I    L+K
Sbjct: 679 SAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEK 738

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           G+V  A   L ++D K  +F L   T  L+
Sbjct: 739 GDVRRAGTYLTKIDEK--NFSLEASTAALL 766



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 171/640 (26%), Positives = 292/640 (45%), Gaps = 42/640 (6%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFR-------KQLFLLALAVYYEMVK--LNCL 165
           E AL  F ++        V+ +N+VL +  R       +    LA++++  MV+  +N +
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
             I+   +LI      G+ ++A        + G      T   +I GLC  NR D+A  +
Sbjct: 91  AAII--GILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDM 148

Query: 226 -FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG---FVPRLGSYSCLID 281
            F +M + G +PD  +YNAL+ G C  ++  EAL LL     DG     P + SY+ +ID
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G F+    D+AY  + +M  + + PDVV Y  +I GL +A  +  A+ +L  M ++G++P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           DT  YN +I+G+C LG L++A  L  ++      P+  T+++LI   C+ G   +A+ +F
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---------------------- 439
           + M + G  P+  +++ L+ G    G L     L   M                      
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             + K  T F  + Q G R  D  S  T++   C  G +  A     Q+   G  P+II+
Sbjct: 389 GAVDKAMTAFTEMRQNGLR-PDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIIS 447

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           + SLI+G C +G      +L  E+  +G+ PD++   T+++ L +  R  +A   F  + 
Sbjct: 448 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 507

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEV 616
             G  P    Y +L+   C   K   +    L  +  I  R D    +  +  + + G V
Sbjct: 508 HIGVKPDVVSYNTLIDGYCFVGKMDESIK-QLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           E+A+    EM  K   F      I L GL Q G++  A  ++  +V+    +   +   +
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           + GLC+   +D A+ +F       F L  R  + ++ +LL
Sbjct: 627 LGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 222/497 (44%), Gaps = 13/497 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L K    D     L  +    V   +  + ++I GY  +G  E+A+    KM  
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPDV  Y+ ++    +      A +V+  MV+    PN   + +L++G +  G    
Sbjct: 299 SGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 358

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +LD M + GI      + I+I    +    D+A   F +M+ +G  PD V+Y+ +++
Sbjct: 359 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIH 418

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  RV++A+        +G  P + S++ LI GL     + +      +M    I P
Sbjct: 419 ILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 478

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D +    ++  L + G+V +A      +   G+ PD   YN LI G+C +G +D++    
Sbjct: 479 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL 538

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P++ T+  L+ G  +NG V+DA  L+ +M +          N ++ GL +A
Sbjct: 539 DRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQA 598

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G +  A  L+ KM + +   L +             +  T++   C    + +A ++   
Sbjct: 599 GRIVAARELYMKM-VDRGTQLRIE------------TYNTVLGGLCENSCVDEALRMFED 645

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L       D+ T++ +IN   KVG I+ A  LF  + L+G  PD +TY  +I        
Sbjct: 646 LRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGL 705

Query: 547 EEDAFRIFGQMPQNGCT 563
            E++  +F  M +NGC 
Sbjct: 706 LEESDNLFLSMEKNGCA 722



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 153/356 (42%), Gaps = 35/356 (9%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI +L K    +      +++ S  +S     F  LI G   +G+ +K  E   +M
Sbjct: 412 SYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 471

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 PD    N +++   ++   + A   +  ++ +   P++V+++ LI+G    GK 
Sbjct: 472 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKM 531

Query: 185 EVAIKMLDEMTQRGILPNKFTYT-----------------------------------IV 209
           + +IK LD M   G+ P+ +TY                                    I+
Sbjct: 532 DESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIM 591

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           + GL Q  R   A  L++KM D G       YN +L G C+   VDEAL +        F
Sbjct: 592 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 651

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              + ++S +I+ L +  R DEA + +  M      PDV+ Y +MI+   E G ++++  
Sbjct: 652 ELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDN 711

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           L   M + G   D++  N +++   + G + +A +   +I +++      T  +LI
Sbjct: 712 LFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 232/444 (52%), Gaps = 13/444 (2%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y  +L        F  AL ++  MV    LP+IV F+ L++ ++K  + +V I + ++M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             GI P  +T  IV++ +C+ ++   A     KM   G  PD V + +LL+GFC   R++
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +ALAL       GF P + +Y+ LI  L + +  + A   + +M +  I P+VV Y  ++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL E G+  DA  LL DM +RGI P+   + ALI  F  +G + +A+ L   + +    
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+T LI G+C  G +D+A+++F  ME  G +P+   +  LI G CK+  +E    +
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           FY+M            SQ G  V +  +   +++ YC  G    A ++  Q+      PD
Sbjct: 350 FYEM------------SQKG-LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I TYN L++G C  G +  AL +FK ++ + +  + VTY  +I G+ +V + EDAF +F 
Sbjct: 397 IRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFC 456

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRR 579
            +   G  P+   Y ++++  CRR
Sbjct: 457 SLFSKGMKPNVITYTTMISGFCRR 480



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 217/433 (50%), Gaps = 19/433 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +  F +M+     P +Y  N V+N   R      A     +M+
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P++VTF+ L++G     + E A+ + D++   G  PN  TYT +I  LC+    +
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +F +M D+G  P+ V YN+L++G C++ R  +A  LLR   K G  P + +++ LI
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  +  EA   Y+ M +  + PDV  Y  +I GL   G++ +A ++   M   G  
Sbjct: 265 DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYY 324

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI GFC    ++    +  E+ ++  + NT T+T+LI G C  G  D AQ++
Sbjct: 325 PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEV 384

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNR 457
           FN+M      P +  +N L+DGLC  G +EKA ++F  M   E+  N   +  + QG   
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG--- 441

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                         C  G +  A+ +   L   G  P++ITY ++I+GFC+ G I+ A  
Sbjct: 442 -------------MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 518 LFKELQLKGLRPD 530
           LFK+++  G  P+
Sbjct: 489 LFKKMKEDGFLPN 501



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 233/505 (46%), Gaps = 36/505 (7%)

Query: 216 INRADEAYRLFLKMKDSGCSPD------------FVAYNALL-NGFCKLRRVDEALALLR 262
           + +    +R  L++ + G SP             F  Y  +L NG   L+  +EAL L  
Sbjct: 13  VKKGFHLHRHRLQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQ-FNEALDLFT 71

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                  +P +  ++ L+  + + KR+D   + + +M    I P +    +++  +  + 
Sbjct: 72  RMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSS 131

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +   A   L  M + G  PD   + +L+ GFC    ++ A +L  +I      PN  T+T
Sbjct: 132 QPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYT 191

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEI 441
            LI  +C+N  ++ A ++FN+M   G  P+V  +N+L+ GLC+ G    A  L    M+ 
Sbjct: 192 TLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKR 251

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA---YKILMQLAESGNLPDIIT 498
           G  P +               +   +++ +   G I +A   YK+++Q++     PD+ T
Sbjct: 252 GIQPNVI--------------TFTALIDAFVKVGKIMEAKELYKVMIQMSV---YPDVFT 294

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y +LING C  G ++ A ++F  ++  G  P+ VTY TLI+G  +  R ED  +IF +M 
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMS 354

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVE 617
           Q G   +   Y  L+   C   +  +A  ++ Q     +  D  +   + + L   G VE
Sbjct: 355 QKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE 414

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
            A+     M  +  D  +  YTI + G+C+ G+V++A ++F  L          +   +I
Sbjct: 415 KALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFI 702
            G C+RG++  A  +F    ++GF+
Sbjct: 475 SGFCRRGFIHEADALFKKMKEDGFL 499


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 255/527 (48%), Gaps = 18/527 (3%)

Query: 48  FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           F+    +  R RL  F   S + S++ +   +DL      ++    ++       ++I+ 
Sbjct: 60  FQEMTRSRPRPRLIDF---SRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
             +      A  + GK+ +   +PD   ++ ++N    +     AL +   MV++   P 
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           ++T + L+NGL  +GK   A+ ++D M + G  PN+ TY  V+  +C+  +   A  L  
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           KM++     D V Y+ +++G CK   +D A  L    E  GF   +  Y+ LI G   A 
Sbjct: 237 KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R+D+     R M + KI PDVV +  +I    + GK+++A +L  +M +RGI PDT  Y 
Sbjct: 297 RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +LI GFC    LD+A  +   +  +   PN  TF ILI G C+  ++DD  +LF KM   
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQT 466
           G       +N LI G C+ G+LE A  LF +M                 RV  D  S + 
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMV--------------SRRVRPDIVSYKI 462

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C  G   KA +I  ++ +S    DI  YN +I+G C    ++ A  LF  L LKG
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           ++PD  TY  +I GL +     +A  +F +M ++G +P+   Y  L+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 15/476 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A++ F +M     +P +  ++ + ++  R + + L L +  +M       N+ T S++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN   +  K  +A   + ++ + G  P+  T++ +I+GLC   R  EA  L  +M + G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  +  NAL+NG C   +V +A+ L+    + GF P   +Y  ++  + ++ +   A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             RKM E KI+ D V Y ++I GL + G + +A  L ++M  +G   D   Y  LI+GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G  D    L  ++ KR   P+   F+ LI    + G + +A++L  +M + G  P   
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG-GNRVHDKASLQTMVEQYCT 473
            + +LIDG CK  +L+KAN +           L L +S+G G  +    +   ++  YC 
Sbjct: 354 TYTSLIDGFCKENQLDKANHM-----------LDLMVSKGCGPNIR---TFNILINGYCK 399

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           A LI    ++  +++  G + D +TYN+LI GFC++G +  A +LF+E+  + +RPD V+
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           Y  L++GL      E A  IF ++ ++       +Y  ++   C   K   A+ L+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 260/571 (45%), Gaps = 36/571 (6%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +  EMT+    P    ++ + S + +  + D    L  +M+  G + +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N  C+ R++  A + +    K G+ P   ++S LI+GL    R  EA     +M E 
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +P ++    ++ GL   GKV DA+ L+  M E G  P+   Y  ++K  C  G    A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++ +R    +   ++I+I G+C++G +D+A  LFN+ME  G    + ++  LI G
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            C AG  +    L   M I +  T             D  +   +++ +   G + +A +
Sbjct: 292 FCYAGRWDDGAKLLRDM-IKRKIT------------PDVVAFSALIDCFVKEGKLREAEE 338

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  ++ + G  PD +TY SLI+GFCK   ++ A  +   +  KG  P+  T+  LING  
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           + +  +D   +F +M   G       Y +L+   C   K  +A  L+ + +      D  
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458

Query: 603 SMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           S K + + L   GE E A++   +++    +  +  Y I + G+C   +V +A ++F  L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518

Query: 662 VECKAIVTPPSCVK--------LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--L 711
                   P   VK        +I GLCK+G L  A  +F    ++G    P  C Y  L
Sbjct: 519 --------PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH--SPNGCTYNIL 568

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +R+ L   D  K  +  L+  +K  G+ +DA
Sbjct: 569 IRAHLGEGDATK--SAKLIEEIKRCGFSVDA 597



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 191/418 (45%), Gaps = 10/418 (2%)

Query: 17  PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP 76
           P E    P+L  + K+  T++ M+               +RK        S +I  L K 
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAME---------LLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
              D  +   +E+          ++  LI G+   G  +   +    M +    PDV  +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           +A+++   ++     A  ++ EM++    P+ VT++ LI+G  K  + + A  MLD M  
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +G  PN  T+ I+I+G C+ N  D+   LF KM   G   D V YN L+ GFC+L +++ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L +        P + SY  L+DGL      ++A   + K+ + K+E D+ +Y ++I 
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G+  A KV DA  L   +  +G+ PD   YN +I G C  G L +A  L  ++ +    P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           N  T+ ILI      G    + KL  ++++ G          ++D L   G L+K+ L
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLKKSFL 617


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 246/497 (49%), Gaps = 13/497 (2%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LR   VSV  +    L+ G  + G  + A E +G++     + +VY  N ++N   + + 
Sbjct: 213 LRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRK 272

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F   +    +M       +IVT++ LIN   + G  E A ++L+  + RG+ P   TY  
Sbjct: 273 FENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ GLC+I + D A  + ++M   G +P+   YN LL   C+   + EA  +     + G
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            +P L S+S LI  L R     +A   +R+M    I PD V+Y ++I G    G + DA+
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDAL 452

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+  +M  RG   D   YN  + G C   +   A  L  E+ +R  +P+ +TFT LI G 
Sbjct: 453 KMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGY 512

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C++G +D A  LF  M +    P    +N LIDG CKAGE+ +A  L+  M I K+    
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM-IRKDI--- 568

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    + D  S  T++  +C++GL+ +A  +  Q+ E G  P+++T N+LI G+C+
Sbjct: 569 ---------IPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G++  A +   ++   G+ PDS +Y TLI+G  +    E AF +  +M + G   +   
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 569 YKSLMTWSCRRRKFSLA 585
           Y  ++   C   K   A
Sbjct: 680 YNLILNGFCAEGKMQEA 696



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 263/588 (44%), Gaps = 50/588 (8%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           G+V ++ D+   L+  Y +     +  E+F  ++       +   N +L    R     L
Sbjct: 184 GSVGLIYDL---LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDL 240

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +Y E+V+     N+ T ++++N L K  K E  +  L +M  +G+  +  TY  +I+
Sbjct: 241 AWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLIN 300

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+    +EA++L       G  P  + YNA+L G CK+ + D A  +L    + G  P
Sbjct: 301 AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTP 360

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ L+  + R     EA   + +M    + PD+V +  +I  L+  G +  A+   
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M   GIVPD   Y  LI GFC  G L  A  ++ E+  R    +  T+   + G+C+ 
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            M  DA  LFN+M + G  P    F  LI G CK G ++KA  LF  M         +R 
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM---------VRT 531

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N   DK +  T+++ +C AG + +A ++   +     +PD I+Y +++NGFC  G 
Sbjct: 532 ----NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL L  ++  KG+RP+ VT  TLI G  R      A+    +M  NG  P    Y +
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L                                  I+ +L++  +E A   + EM+ +  
Sbjct: 648 L----------------------------------IDGYLKEANLEKAFILINEMEKRGL 673

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            F +  Y + L G C +G+++EA  +   ++E        +   LI+G
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 225/482 (46%), Gaps = 48/482 (9%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +Q L+   S  +      +  ++ G  K+G  ++A +   +M +    P+   YN +L  
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R+   L A  ++ EM +   LP++V+FS LI  L+++G    A+    EM + GI+P+
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
              YTI+I G C+     +A ++  +M   GC  D V YN  LNG CK +   +A  L  
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              + G VP   +++ LI G  +    D+A   +  M    ++PD V Y  +I G  +AG
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++  A +L  DM  + I+PD   Y  ++ GFC  GLL +A +L  ++ ++   PN  T  
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G CR+G +  A +  +KM   G  P    +N LIDG  K   LEKA +L  +ME  
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEME-- 669

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                             K  LQ                             +IITYN +
Sbjct: 670 ------------------KRGLQF----------------------------NIITYNLI 683

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           +NGFC  G +  A ++ +++   G+ PD  TY +LING    D  ++AFR   +M Q G 
Sbjct: 684 LNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGL 743

Query: 563 TP 564
            P
Sbjct: 744 VP 745



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 239/561 (42%), Gaps = 25/561 (4%)

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y +++    Q  +  E    F  ++  G S    A N LL G  +   VD A  +     
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G    + + + +++ L + ++++    +   M  + +  D+V Y  +I      G V+
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +LL+    RG+ P    YNA++ G C +G  D+A+ + +E+ +    PN  T+  L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +CR   + +AQ++F++M + G  P +  F++LI  L + G L +A + F +ME     
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME----- 424

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                       V D      +++ +C  G +  A K+  ++   G   D++TYN+ +NG
Sbjct: 425 --------RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK      A  LF E+  +G+ PD  T+ TLI G  +    + A  +F  M +    P 
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKG---EVENAIQ 621
              Y +L+   C+  +   A  LW   +R     D  S  ++   F   G   E  N   
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
            +LE   + N   L      + G C+ G + +A    S ++    I    S   LI G  
Sbjct: 597 QMLEKGIRPN---LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           K   L+ A  +     K G        N +L    F  + K   A  +L +M  +G + D
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNG--FCAEGKMQEAEQVLRKMIEIGINPD 711

Query: 742 ACLYPKTKSLLPGPWNTREME 762
              Y    SL+ G  +   M+
Sbjct: 712 GATY---SSLINGHVSQDNMK 729



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    +R  +  F + + +I    K    D      + +   N+      +  LI G+ 
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G+  +A E +  M   D  PD   Y  VLN      L   AL +  +M++    PN+V
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T + LI G  +SG    A + L +M   GI+P+ F+Y  +I G  +    ++A+ L  +M
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +  G   + + YN +LNGFC   ++ EA  +LR   + G  P   +YS LI+G       
Sbjct: 669 EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM 728

Query: 290 DEAYAWYRKMFEEKIEPD 307
            EA+ ++ +M +  + PD
Sbjct: 729 KEAFRFHDEMLQRGLVPD 746


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 268/587 (45%), Gaps = 55/587 (9%)

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
            A++    +F +   +I  L     F +  + L +++   +     +F +++  Y K G 
Sbjct: 90  GAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGL 149

Query: 114 CEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             +A      M   + C P    YN VL+I        +A  V+Y+M+     P + TF 
Sbjct: 150 PGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFG 209

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +++  L    + + A  +L +M + G +PN   Y  +I  LC+ NR  EA +L   M   
Sbjct: 210 VVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLM 269

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            C PD   +N +++G C+  R+ EA  LL      GF     +Y  L+ GL R  + DEA
Sbjct: 270 CCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA 329

Query: 293 YAWYRKM--------------------FEEK------------IEPDVVLYGVMIRGLSE 320
            A   K+                    FEE              EPD   + +MI GL +
Sbjct: 330 RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G +  A++LL++M  +   P+   Y  LI GFC  G L++A  +   +  +    NT  
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           +  LIC +C++G +++A +LF +M   GC P +  FN+LI+GLCK  ++E+A  L++ M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 440 ---EIGKNPT-------LFLR--LSQGGNRVH---------DKASLQTMVEQYCTAGLIH 478
               I    T         +R  + Q    V          D  +   +++  C  G + 
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           K   +  ++   G  P II+ N LI+G C+ G +N ALK  +++  +GL PD VTY +LI
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           NGL ++   ++A  +F ++   G  P    Y +L++  C    F+ A
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/579 (27%), Positives = 258/579 (44%), Gaps = 28/579 (4%)

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           LLI+ L   G  +V  K+L +M   G+L  +  + +++    +     +A RL L M   
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 233 -GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C P F +YN +L+          A  +       G  P + ++  ++  L      D 
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A +  R M +    P+ V+Y  +I  L E  +V +A++LL DM      PD   +N +I 
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G + +A  L   +  R    +  T+  L+ G+CR G VD+A+ L NK+      P
Sbjct: 284 GLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----P 339

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           +  ++N LI G   +G  E+A +LL+  M I G  P              D  +   M++
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP--------------DAYTFNIMID 385

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G +  A ++L ++      P++ITY  LINGFCK G +  A ++   +  KGL  
Sbjct: 386 GLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSL 445

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           ++V Y  LI  L +    E+A ++FG+M   GC P    + SL+   C+  K   A SL+
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLY 505

Query: 590 LQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
              +L  +          +  FL +  ++ A + + EM F+        Y   +  LC+ 
Sbjct: 506 HDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKT 565

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G V++ L +F  ++      T  SC  LI GLC+ G ++ A+      +  G  L P + 
Sbjct: 566 GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG--LTPDIV 623

Query: 709 NYLLRSLL--FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            Y   SL+    K      A +L  +++S G   DA  Y
Sbjct: 624 TY--NSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 210/425 (49%), Gaps = 20/425 (4%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD +     S  +  +  L+ G  ++G  ++A     K+      P+  +YN +++    
Sbjct: 298 LDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVA 353

Query: 146 KQLFLLALAVYYE-MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
              F  A  + Y  MV     P+  TF+++I+GL K G    A+++L+EM  +   PN  
Sbjct: 354 SGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVI 413

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TYTI+I+G C+  R +EA  +   M   G S + V YN L+   CK   ++EAL L    
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G  P + +++ LI+GL +  + +EA + Y  MF E +  + V Y  ++        +
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A KL+ +M  RG   D   YN LIK  C  G +++   L  E+  +   P   +  IL
Sbjct: 534 QQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNIL 593

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GK 443
           I G+CR G V+DA K    M   G  P +  +N+LI+GLCK G +++A+ LF K++  G 
Sbjct: 594 ISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGI 653

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              D  +  T++ ++C  G+ + A  +L +  +SG +P+ +T++ LI
Sbjct: 654 RP--------------DAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699

Query: 504 NGFCK 508
           N   K
Sbjct: 700 NYIVK 704



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 248/537 (46%), Gaps = 64/537 (11%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +L+  +   +      ++ S  VS     F V++     V + + A    
Sbjct: 169 TFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLL 228

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  IY  +++          AL +  +M  + C P++ TF+ +I+GL ++
Sbjct: 229 RDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRA 288

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+   A K+LD M  RG   +  TY  ++ GLC++ + DEA  L  K+ +    P+ V Y
Sbjct: 289 GRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLY 344

Query: 242 NALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           N L++G+    R +EA  LL  +    G+ P   +++ +IDGL +      A     +M 
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            ++ EP+V+ Y ++I G  + G++++A ++++ M  +G+  +T  YN LI   C  G ++
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM---------------- 404
           +A  L  E+  +   P+ +TF  LI G+C+N  +++A  L++ M                
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524

Query: 405 ---------EKA----------GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN- 444
                    ++A          GC      +N LI  LCK G +EK   LF +M +GK  
Sbjct: 525 HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEM-LGKGI 583

Query: 445 -PT------LFLRLSQGG----------NRVH-----DKASLQTMVEQYCTAGLIHKAYK 482
            PT      L   L + G          + +H     D  +  +++   C  G + +A  
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASN 643

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           +  +L   G  PD ITYN+LI+  C  G  N A  L  +    G  P+ VT+  LIN
Sbjct: 644 LFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 237/498 (47%), Gaps = 51/498 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F  L+S   K+G     + S  K  E     P++Y  +  +N   + Q   L  +V  ++
Sbjct: 95  FAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV 154

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P IVTF+ LINGL K G+   A+++ D+M  +G  P+ +TY  +I+GLC+I   
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGET 214

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  KM+++GC P+ V Y+ L++  C+ R V+EAL +    +  G  P + +Y+ L
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSL 274

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL +  R+ EA A   +M    I PD+V + V++    + GKV +A+ +L  M E G+
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334

Query: 340 VPDT-----------------------------------YCYNALIKGFCDLGLLDQARS 364
            P+                                    + YN LI G+C    +D+A  
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+  +   PN  ++  LI G C+ G + +AQ LF  M   G  P +  ++ L+DG C
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454

Query: 425 KAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           K G L KA  LF  M+     P L +                 +V   C +G    A K+
Sbjct: 455 KQGYLGKAFRLFRAMQSTYLKPNLVM--------------YTILVHAMCKSGNHKDARKL 500

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             +L   G  P +  Y ++ING CK G ++ AL+ F+ ++  G  PD ++Y  +I GL +
Sbjct: 501 FSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560

Query: 544 VDREEDAFRIFGQMPQNG 561
              E  A  + G+M   G
Sbjct: 561 HKDESRALLLVGEMRDRG 578



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 241/466 (51%), Gaps = 14/466 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
           + AL SF  M      P +  +  +L+ I    Q + + +++  +M  +   PNI T S+
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            +N   +  + ++   +L ++ + G+ P   T+T +I+GLC++    +A  LF  M   G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C PD   YN ++NG CK+     A  LL+  E+ G  P + +YS LID L R +  +EA 
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +  M  + I PD+  Y  +I+GL +  + K+A  LL++M    I+PD   +N L+  F
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G + +A  +   + +    PN  T++ L+ G      V +A+KLF+ M   GC P++
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNI 373

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N LI+G CKA  +++A  LF +M           + QG     +  S  T++  +C 
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEM-----------IHQG--LTPNNVSYNTLIHGFCQ 420

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + +A  +   +  +GNLPD+ TY+ L++GFCK G +  A +LF+ +Q   L+P+ V 
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           Y  L++ + +    +DA ++F ++   G  P   +Y +++   C+ 
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKE 526



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/432 (31%), Positives = 224/432 (51%), Gaps = 15/432 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G  KVG+  +A+E F  M    CQPDVY YN ++N   +      A  +  +M
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKM 224

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C PN+VT+S LI+ L +      A+ +   M  +GI P+ FTYT +I GLC+ +R 
Sbjct: 225 EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRW 284

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L  +M      PD V +N L++ FCK  +V EAL +L++  + G  P + +YS L
Sbjct: 285 KEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G        EA   +  M  +  +P++  Y ++I G  +A ++ +AM+L ++M  +G+
Sbjct: 345 MYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI GFC LG L +A+ L   +    +LP+  T++IL+ G C+ G +  A +
Sbjct: 405 TPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFR 464

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           LF  M+     P++ M+  L+  +CK+G  + A  LF ++ + G  P + L         
Sbjct: 465 LFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQL--------- 515

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                  T++   C  GL+ +A +    +   G  PD I+YN +I G  +  + + AL L
Sbjct: 516 -----YTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLL 570

Query: 519 FKELQLKGLRPD 530
             E++ +G   D
Sbjct: 571 VGEMRDRGFIAD 582



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 204/404 (50%), Gaps = 8/404 (1%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           +GF       K     +  + + +I+ L K   F    +  D++ +         +  +I
Sbjct: 146 LGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTII 205

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           +G  K+G+   A     KM+E  CQP++  Y+ +++   R +L   AL ++  M      
Sbjct: 206 NGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I T++ LI GL K  + + A  +L+EMT   I+P+  T+ +++   C+  +  EA  +
Sbjct: 266 PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGV 325

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M + G  P+ V Y++L+ G+     V EA  L       G  P + SY+ LI+G  +
Sbjct: 326 LKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCK 385

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           AKR DEA   + +M  + + P+ V Y  +I G  + GK+++A  L  +M   G +PD + 
Sbjct: 386 AKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFT 445

Query: 346 YNALIKGFCDLGLLDQA----RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           Y+ L+ GFC  G L +A    R++Q    K    PN   +TIL+  MC++G   DA+KLF
Sbjct: 446 YSILLDGFCKQGYLGKAFRLFRAMQSTYLK----PNLVMYTILVHAMCKSGNHKDARKLF 501

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           +++   G  P V ++  +I+GLCK G L++A   F  ME    P
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCP 545



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 249/530 (46%), Gaps = 21/530 (3%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL-RRVDEALALLRSFEKDGFVPRLGSYSC 278
           D+A   F  M      P  + +  LL+   K+ +  D  ++L +  E  G  P + + S 
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
            ++   + +R D  ++   K+ +  ++P +V +  +I GL + G+   A++L  DM  +G
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD Y YN +I G C +G    A  L  ++ +    PN  T++ LI  +CR+ +V++A 
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            +F+ M+  G  P +  + +LI GLCK    ++A+ L  +M                N +
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMT-------------SLNIM 300

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +V+ +C  G + +A  +L  + E G  P+++TY+SL+ G+    ++  A KL
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  +  KG +P+  +Y  LING  +  R ++A ++F +M   G TP+   Y +L+   C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             K   A  L+     +     D    SI  + F ++G +  A +    M        L 
Sbjct: 421 LGKLREAQDLFRNMCTN-GNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 479

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YTI +  +C+ G  K+A  +FS L              +I+GLCK G LD A++ F   
Sbjct: 480 MYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNM 539

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY--DLDACL 744
             +G        N ++R LL  KD  +  A  L+  M+  G+  D+  CL
Sbjct: 540 EADGCPPDEISYNVIIRGLLQHKDESR--ALLLVGEMRDRGFIADVRPCL 587



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 162/310 (52%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  K    ++A     +M   +  PD+  +N +++   ++     AL V   M ++ 
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT+S L+ G S       A K+   M  +G  PN F+Y I+I+G C+  R DEA 
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +LF +M   G +P+ V+YN L++GFC+L ++ EA  L R+   +G +P L +YS L+DG 
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     +A+  +R M    ++P++V+Y +++  + ++G  KDA KL S++  +G+ P  
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  +I G C  GLLD+A      +      P+  ++ ++I G+ ++     A  L  +
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGE 573

Query: 404 MEKAGCFPSV 413
           M   G    V
Sbjct: 574 MRDRGFIADV 583



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 17/273 (6%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL-LFYKME-IGKNPTLFLRL 451
           +DDA   FN M      P +  F  L+  + K G+     + L  +ME +G +P ++   
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIY--- 129

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +L   +  +C    +   + +L ++ + G  P I+T+ +LING CKVG 
Sbjct: 130 -----------TLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A++LF ++  KG +PD  TY T+INGL ++     A  +  +M + GC P+   Y +
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   CR R  + A  ++          D  +  S+ + L K         LL     LN
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298

Query: 632 DF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
               +  + + +   C++G+V EAL +   + E
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTE 331



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 10/269 (3%)

Query: 5   LNEVLTILDTVTP--IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           ++E L +L T+T   +EP +      +   ++ + +++ +       F +   K  +   
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARK-----LFHVMITKGCKPNI 373

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           F+ N  +I+   K    D   Q  +E+    ++  +  +  LI G+ ++G   +A + F 
Sbjct: 374 FSYN-ILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            M      PD++ Y+ +L+  F KQ +L  A  ++  M      PN+V +++L++ + KS
Sbjct: 433 NMCTNGNLPDLFTYSILLD-GFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  + A K+  E+  +G+ P+   YT +I+GLC+    DEA   F  M+  GC PD ++Y
Sbjct: 492 GNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISY 551

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFV 270
           N ++ G  + +    AL L+      GF+
Sbjct: 552 NVIIRGLLQHKDESRALLLVGEMRDRGFI 580


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 179/649 (27%), Positives = 303/649 (46%), Gaps = 47/649 (7%)

Query: 151 LALAVYYEMVK---LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           L ++++  MV+   +   PN  T+S+LI  L + G+ + +      + + G   N     
Sbjct: 78  LVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVIN 137

Query: 208 IVISGLCQINRADEAYRLFL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            ++ GLC   R  EA  + L +M + GC+PD V+Y+ LL GFC   R +EAL LLR    
Sbjct: 138 QLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAN 197

Query: 267 D---GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
           D      P + +Y+ +IDGL +A+ +D A   +++M +  ++P+   Y  +I G    GK
Sbjct: 198 DHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGK 257

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            K+ +++L  M  RG+ PD Y Y +L+   C L  +     L VE       P+ H F I
Sbjct: 258 WKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNI 314

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---E 440
                 + GM+D A  +FNKM + G  P+V  + ALID LCK G ++ A + F +M    
Sbjct: 315 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 374

Query: 441 IGKNPTLFLRLSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAY 481
           +  N  +F  L  G   V                    +     T++   C  G + +  
Sbjct: 375 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 434

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +++  +   G  PD  +Y  LI+G+C  G  + A K+F  +   GL P  VTY TL++G 
Sbjct: 435 RLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 494

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
               R +DA+ +F +M + G TP    Y +++    + ++FS A  L+L  +   +  D 
Sbjct: 495 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDI 554

Query: 602 ESMKSIEEFLQKG----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +   I   L K     E     Q L     +LN   +  +TI +  L + G+ ++A+++
Sbjct: 555 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN---IITFTIMIGALLKGGRKEDAMDL 611

Query: 658 FSVLVECKAIVTPPSCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           F+  +    +V      +L+   L + G L+    +F    KNG     ++ N L+R LL
Sbjct: 612 FAA-IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 670

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
              D  +  AY  L ++    + ++A     T SLL   + + E ++ +
Sbjct: 671 HRGDISRAGAY--LSKLDERNFSVEA----STTSLLISIFTSDEYQHHA 713



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 236/548 (43%), Gaps = 94/548 (17%)

Query: 66  NSAVISMLLKP--------NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           N  VI+ LLK            D+  Q + EL     +V    + +L+ G+      E+A
Sbjct: 132 NDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVS---YSILLKGFCNENRAEEA 188

Query: 118 LESFGKMKE---FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           LE    M       C P+V  Y  V++   + QLF  A  V+ +M+     PN  T++ L
Sbjct: 189 LELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCL 248

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA--------------- 219
           I+G    GK +  ++ML++M+ RG+ P+ +TY  +++ LC ++                 
Sbjct: 249 IHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPD 308

Query: 220 -----------------DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
                            D+A  +F KM+  G SP+ V Y AL++  CKL RVD+A     
Sbjct: 309 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 368

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
               +G  P +  ++ L+ GL    +++ A     +M ++ I P+ V +  +I  L   G
Sbjct: 369 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 428

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +V +  +L+  M   G+ PD + Y  LI G+C  G  D+A  +   +      P   T+ 
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            L+ G C    +DDA  LF +M + G  P V  +N ++ GL +     +A  L+  M   
Sbjct: 489 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM--- 545

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                                                          SG   DI TYN +
Sbjct: 546 ---------------------------------------------INSGTKCDIYTYNII 560

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           +NG CK   ++ A K+F+ L  KGL+ + +T+  +I  L +  R+EDA  +F  +P NG 
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620

Query: 563 TPSPAVYK 570
            P+   Y+
Sbjct: 621 VPNVVTYR 628



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 180/390 (46%), Gaps = 35/390 (8%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN---- 141
           LD +    +S    +F +  S Y K G  +KA++ F KM++    P+V  Y A+++    
Sbjct: 297 LDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCK 356

Query: 142 -----------------------IAFRKQLFLL--------ALAVYYEMVKLNCLPNIVT 170
                                  + F   ++ L        A  + YEM+     PN V 
Sbjct: 357 LGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 416

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           F+ LI  L   G+     +++D M   G+ P+ F+YT +ISG C   R DEA ++F  M 
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G SP  V YN LL+G+C   R+D+A  L R   + G  P + +Y+ ++ GLF+ KR+ 
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 536

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA   Y  M     + D+  Y +++ GL ++  V +A K+   +  +G+  +   +  +I
Sbjct: 537 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
                 G  + A  L   I     +PN  T+ ++   +   G +++   LF+ MEK G  
Sbjct: 597 GALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTA 656

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME 440
           P+  M NAL+  L   G++ +A     K++
Sbjct: 657 PNSQMLNALVRRLLHRGDISRAGAYLSKLD 686



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 221/523 (42%), Gaps = 59/523 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K   FD       ++    V   +D +  LI GY  +G  ++ ++   KM  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE----MVKLNCLPNIVTFSLLINGLSKSG 182
              +PD Y Y ++LN       +L AL+  +     MV+    P+   F++  +  +K G
Sbjct: 271 RGLKPDCYTYGSLLN-------YLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 323

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             + A+ + ++M Q G+ PN   Y  +I  LC++ R D+A   F +M + G +P+ V +N
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +L+ G C + + + A  L+      G  P    ++ LI  L    R  E       M   
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PD   Y  +I G   AG+  +A K+   M   G+ P    YN L+ G+C    +D A
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  E+ ++   P   T+  ++ G+ +     +A++L+  M  +G    +  +N +++G
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 563

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCK+  +++A  +F                                +  C+ GL      
Sbjct: 564 LCKSNCVDEAFKMF--------------------------------QSLCSKGL------ 585

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
              QL       +IIT+  +I    K G    A+ LF  +   GL P+ VTY  +   L 
Sbjct: 586 ---QL-------NIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLI 635

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
                E+   +F  M +NG  P+  +  +L+     R   S A
Sbjct: 636 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 224/528 (42%), Gaps = 53/528 (10%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE-----------ALALLRSFEKDG 268
           D+A +LF ++         VA+N +LN   +  R               ++L     ++ 
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVREC 90

Query: 269 FV---PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +   P   +YS LI  L R  R   ++A +  + +     + ++   +++GL +  +V 
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 326 DAMK-LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL---QVEIWKRDSLPNTHTF 381
           +AM  LL  M E G  PDT  Y+ L+KGFC+    ++A  L         R   PN  T+
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           T +I G+C+  + D A+ +F +M   G  P+   +N LI G    G+ ++   +  KM  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 442 -GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P              D  +  +++   C    +H    +++   E+G  PD   +N
Sbjct: 271 RGLKP--------------DCYTYGSLLNYLCALSEMHSFLDLMV---ENGLSPDHHIFN 313

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
              + + K G I+ A+ +F +++  GL P+ V YG LI+ L ++ R +DA   F QM   
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-----GE 615
           G TP+  V+ SL+   C   K+  A  L  + L       D+ +     F          
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEML-------DQGICPNAVFFNTLICNLCN 426

Query: 616 VENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           V   ++G   +D  +    + P    YT  + G C  G+  EA  +F  +V      T  
Sbjct: 427 VGRVMEGRRLIDL-MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEV 485

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           +   L+HG C    +D A  +F   L+ G        N +L  L  +K
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTK 533



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 2/275 (0%)

Query: 93  NVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +V V  D F    LISGY   G  ++A + F  M      P    YN +L+         
Sbjct: 442 HVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 501

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  ++ EM++    P +VT++ +++GL ++ +   A ++   M   G   + +TY I++
Sbjct: 502 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 561

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +GLC+ N  DEA+++F  +   G   + + +  ++    K  R ++A+ L  +   +G V
Sbjct: 562 NGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLV 621

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +Y  + + L      +E  + +  M +    P+  +   ++R L   G +  A   
Sbjct: 622 PNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAY 681

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           LS + ER    +    + LI  F        A+SL
Sbjct: 682 LSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 102/232 (43%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D + S  +S     +  L+ GY      + A   F +M      P V  YN +L+  
Sbjct: 470 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F+ + F  A  +Y  M+      +I T+++++NGL KS   + A KM   +  +G+  N 
Sbjct: 530 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 589

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+TI+I  L +  R ++A  LF  +  +G  P+ V Y  +     +   ++E  +L  +
Sbjct: 590 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 649

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            EK+G  P     + L+  L        A A+  K+ E     +     ++I
Sbjct: 650 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLI 701


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 250/501 (49%), Gaps = 37/501 (7%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +G  +VV+  +  LI GY + G  + AL     M      PD Y YN VL      + + 
Sbjct: 153 TGAANVVT--YTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWE 207

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  +  EM++  C PN VTF+  I    ++G  + A+++LD+M + G  P+   Y+ +I
Sbjct: 208 EAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +G  +    D+A  L   M    C P+ V YNA L G C   R ++   L+    + G  
Sbjct: 268 NGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCS 324

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++S LI  L +    D A     +M +   EPD V Y ++I  LSE G+V DA++L
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L+ M  +   PD   +NA++KGFC       A  L  ++++ D      TF ILI  +C+
Sbjct: 385 LNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQ 441

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF-- 448
           NG+V+ A ++F +M +  C P +  +++L++G  + G +E A  LF  M     P +F  
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPC--KPDIFSY 499

Query: 449 ----------LRLSQGGNRVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAE 489
                      R    G  + +         + +   ++   C  GL+ +A ++L Q+  
Sbjct: 500 NAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 559

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G+ PDI TYN+LINGF + G ++ ALKL   +  K   PD+++Y + + GL R +R +D
Sbjct: 560 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQD 616

Query: 550 AFRIFGQMPQNGCTPSPAVYK 570
           A  +  +M +N CTP+   +K
Sbjct: 617 AEELVAEMLRNKCTPNEVTFK 637



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 230/511 (45%), Gaps = 76/511 (14%)

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I  LC   R  +A R+   +K +  + D V++N L+ G+C+  R+ +A  +L +    
Sbjct: 95  ILIKKLCATGRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVLGAARAT 153

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G                                      +VV Y  +I G   +G++ DA
Sbjct: 154 GAA------------------------------------NVVTYTALIDGYCRSGRLDDA 177

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           ++L++ M    + PDTY YN ++KG C     ++A  L  E+ +    PN  TF   I  
Sbjct: 178 LRLIASM---PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRS 234

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C+NG++D A +L ++M + GC P V +++ LI+G  + G +++A  L   M    N   
Sbjct: 235 FCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVC 294

Query: 448 FLRLSQG---GNRVHD----------------KASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +    +G     R  D                +A+   ++   C   L+  A ++L Q+ 
Sbjct: 295 YNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQME 354

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  PD + YN +IN   + G ++ AL+L   +  K   PD++ +  ++ G  R +R  
Sbjct: 355 KYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWH 411

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-I 607
           DA  +  QM ++ C      +  L+   C+    + A  ++ Q  R     D  +  S +
Sbjct: 412 DASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 471

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECK 665
             F ++G VE AIQ    M  K + F    Y   L GLC+  + ++A  + + +V  +C 
Sbjct: 472 NGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIAEMVGKDC- 527

Query: 666 AIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
               PP+ V    LI+ LC++G +D A++V 
Sbjct: 528 ----PPNEVTFNILINSLCQKGLVDRAIEVL 554


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 244/507 (48%), Gaps = 21/507 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M       DVY    V+N            +V  ++ KL   P+  TF+ LI GL   G
Sbjct: 99  QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEG 158

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+ + D+M   G  PN  TY  +I GLC++  +  A RL   M    C P+ + YN
Sbjct: 159 KIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYN 218

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++   K R+V+EAL +       G  P + +Y+ +I GL +   +        +M + 
Sbjct: 219 TIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           KI P+VV++  ++  L + G V  A  ++  M +RG+ PD   Y AL+ G C    +D+A
Sbjct: 279 KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEA 338

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   + ++   PN  +++ LI G C+   +D A  LF +M +    P++  +N LI G
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  G L  A  LF++M                 ++ D  + + +++  C    + +A  
Sbjct: 399 LCHVGRLRDAIALFHEM-------------VASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  S   PDI +YN +I+G C+VG +  A  LF  L  KGL PD  TY  +INGL 
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR--- 599
                 +A ++F +M  +GC+P    Y +L+T    R   +L+    +Q L+++ GR   
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTY-NLITRGFLRNNETLS---AIQLLQEMLGRGFS 561

Query: 600 -DDESMKSIEEFLQKGEVENAIQGLLE 625
            D  ++  I E L    ++ +++ +L 
Sbjct: 562 ADASTITLIVEMLSDDGLDQSVKQILH 588



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 215/460 (46%), Gaps = 15/460 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI G    G   +AL  F KM     QP+   Y  +++   +      A+ +   MV
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           + NC PN++T++ +I+ L K  +   A+ +  EM  +GI PN  TY  +I GLC+ +   
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
               L  +M DS   P+ V +  L++  CK   V  A  ++    + G  P + +Y+ L+
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM 326

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG       DEA   +  M  +   P+V+ Y  +I G  +  ++  AM L  +M +R +V
Sbjct: 327 DGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELV 386

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YN LI G C +G L  A +L  E+     +P+  T+ IL+  +C+   +D A  +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
              +E +   P +  +N +IDG+C+ GELE A  LF  +   G +P              
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHP-------------- 492

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   M+   C  GL+ +A K+  ++   G  PD  TYN +  GF +      A++L 
Sbjct: 493 DVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLL 552

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           +E+  +G   D+ T   ++  L     ++   +I  +  Q
Sbjct: 553 QEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 244/552 (44%), Gaps = 66/552 (11%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N  DEA   F +M      P  V +  +L     ++     L+L +  +  G    + + 
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I+      R D  ++   K+F+   +PD   +  +IRGL   GK+ +A+ L   M  
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  P+   Y  LI G C +G    A  L   + +++  PN  T+  +I  + ++  V++
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQ 453
           A  +F++M   G  P+V  +N++I GLCK  E +    L  +M   +I  N  +F  L  
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 454 GGNR------VHDKASL-------------QTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
              +       HD   +               +++ +C    + +A K+   +   G  P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++I+Y++LING+CK+  I+ A+ LF+E+  + L P+ VTY TLI+GL  V R  DA  +F
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M  +G  P    Y+ L+ + C+ R    A ++    L+ I G +              
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM----LKAIEGSN-------------- 454

Query: 615 EVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
                               LAP    Y I + G+C+ G+++ A ++FS L         
Sbjct: 455 --------------------LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDV 494

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   +I+GLC +G L  A  +F     +G    P  C Y L +  F ++N+ + A  LL
Sbjct: 495 WTYTIMINGLCLQGLLAEATKLFREMNTDG--CSPDDCTYNLITRGFLRNNETLSAIQLL 552

Query: 731 CRMKSVGYDLDA 742
             M   G+  DA
Sbjct: 553 QEMLGRGFSADA 564



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 180/388 (46%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  N +   R      ++    +  + + +I  L K    +       E+ +  +S    
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G  K  + +       +M +    P+V I+  +++   ++ +  +A  V   M
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P++VT++ L++G     + + A K+ D M ++G  PN  +Y+ +I+G C+I R 
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  LF +M      P+ V YN L++G C + R+ +A+AL       G +P L +Y  L
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRIL 430

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +D L + +  D+A A  + +    + PD+  Y ++I G+   G+++ A  L S +  +G+
Sbjct: 431 LDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y  +I G C  GLL +A  L  E+      P+  T+ ++  G  RN     A +
Sbjct: 491 HPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQ 550

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           L  +M   G          +++ L   G
Sbjct: 551 LLQEMLGRGFSADASTITLIVEMLSDDG 578


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 233/438 (53%), Gaps = 15/438 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  V+ E  ++    N V+++++++ L + GK + A  +L +M  RG +P+  +Y++++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G CQ+ +  +  +L  +++  G  P+   YN++++  CK  RV EA  +LR  +     P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               Y+ LI G  ++      Y  + +M  +KI PD V Y  MI GL +AGKV +A KL 
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M  +G+ PD   Y ALI G+C  G + +A SL  ++ ++   PN  T+T L+ G+C+ 
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G VD A +L ++M + G  P+V  +NALI+GLCK G +E+A  L  +M++ G  P     
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP----- 530

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +  T+++ YC  G + KA+++L  + + G  P I+T+N L+NGFC  G
Sbjct: 531 ---------DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSG 581

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +    +L K +  KG+ P++ T+ +L+      +       I+  M   G  P    Y 
Sbjct: 582 MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641

Query: 571 SLMTWSCRRRKFSLAFSL 588
            L+   C+ R    A+ L
Sbjct: 642 ILIKGHCKARNMKEAWFL 659



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 277/585 (47%), Gaps = 52/585 (8%)

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS-GK 183
           K++   P   +++    +     L L A  ++ +++    L ++ + +L +  LS S   
Sbjct: 175 KDWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDG 232

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A ++  E ++ G+  N  +Y I++  LCQ+ +  EA+ L ++M+  G  PD V+Y+ 
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +++G+C++ ++ + L L+   ++ G  P   +Y+ +I  L +  R  EA    R M  ++
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I PD V+Y  +I G  ++G V    KL  +M+ + IVPD   Y ++I G C  G + +AR
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+  +   P+  T+T LI G C+ G + +A  L N+M + G  P+V  + AL+DGL
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK GE++ AN L ++M E G  P +               +   ++   C  G I +A K
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNV--------------CTYNALINGLCKVGNIEQAVK 518

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           ++ ++  +G  PD ITY ++++ +CK+G +  A +L + +  KGL+P  VT+  L+NG  
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
                ED  R+   M   G  P+   + SLM   C R        ++            +
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIY------------K 626

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            M +              QG++             Y I + G C+   +KEA  +   +V
Sbjct: 627 GMHA--------------QGVVP--------DTNTYNILIKGHCKARNMKEAWFLHKEMV 664

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           E    +T  S   LI G  KR   + A  +F     +GFI    +
Sbjct: 665 EKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEI 709



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 50/482 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E R     VVS  + V++ GY +V    K L+   +++    +P+ Y YN++++   +  
Sbjct: 279 EFRGNVPDVVS--YSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTG 336

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             + A  V   M      P+ V ++ LI+G  KSG   V  K+ DEM ++ I+P+  TYT
Sbjct: 337 RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYT 396

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I GLCQ  +  EA +LF +M   G  PD V Y AL++G+CK   + EA +L     + 
Sbjct: 397 SMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ L+DGL +    D A     +M E+ ++P+V  Y  +I GL + G ++ A
Sbjct: 457 GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +KL+ +M   G  PDT  Y  ++  +C +G + +A  L   +  +   P   TF +L+ G
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C +GM++D ++L   M   G  P+   FN+L+   C    + +A +  YK         
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNM-RATIEIYK--------- 626

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                                  +   G +PD  TYN LI G C
Sbjct: 627 --------------------------------------GMHAQGVVPDTNTYNILIKGHC 648

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K  N+  A  L KE+  KG    + +Y +LI G  +  + E+A ++F +M  +G      
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKE 708

Query: 568 VY 569
           +Y
Sbjct: 709 IY 710



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 204/377 (54%), Gaps = 8/377 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++IS L K        Q L  +++  +   + V+  LISG+ K G+     + F +MK 
Sbjct: 326 NSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y ++++   +    + A  ++ EM+     P+ VT++ LI+G  K+G+ + 
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKE 445

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + ++M ++G+ PN  TYT ++ GLC+    D A  L  +M + G  P+   YNAL+N
Sbjct: 446 AFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALIN 505

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK+  +++A+ L+   +  GF P   +Y+ ++D   +     +A+   R M ++ ++P
Sbjct: 506 GLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V + V++ G   +G ++D  +L+  M ++GI+P+   +N+L+K +C   + +  R+  
Sbjct: 566 TIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYC---IRNNMRA-T 621

Query: 367 VEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           +EI+K    +  +P+T+T+ ILI G C+   + +A  L  +M + G   +   +N+LI G
Sbjct: 622 IEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681

Query: 423 LCKAGELEKANLLFYKM 439
             K  + E+A  LF +M
Sbjct: 682 FYKRKKFEEARKLFEEM 698



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 265/595 (44%), Gaps = 88/595 (14%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ-INRADEAYRLFL 227
           + F +    L ++G    A K+ D++   G+L +  +  + ++ L    +    A+R+F 
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +  + G   + V+YN +L+  C+L +V EA +LL   E  G VP                
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVP---------------- 285

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
                              DVV Y V++ G  +  ++   +KL+ +++ +G+ P+ Y YN
Sbjct: 286 -------------------DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYN 326

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ++I   C  G + +A  +   +  +   P+   +T LI G  ++G V    KLF++M++ 
Sbjct: 327 SIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P    + ++I GLC+AG++ +A  LF +M           LS+G     D+ +   +
Sbjct: 387 KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-----------LSKGLKP--DEVTYTAL 433

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ YC AG + +A+ +  Q+ E G  P+++TY +L++G CK G ++ A +L  E+  KGL
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P+  TY  LINGL +V   E A ++  +M   G  P    Y ++M   C+  + + A  
Sbjct: 494 QPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHE 553

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L L+ + D                         +GL           +  + + + G C 
Sbjct: 554 L-LRIMLD-------------------------KGLQP--------TIVTFNVLMNGFCM 579

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G +++   +   +++   +    +   L+   C R  +   ++++      G +     
Sbjct: 580 SGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNT 639

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
            N L++    +++ K+  A+ L   M   G+ L A  Y    SL+ G +  ++ E
Sbjct: 640 YNILIKGHCKARNMKE--AWFLHKEMVEKGFSLTAASY---NSLIKGFYKRKKFE 689



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 127/277 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++  L K    D+  + L E+    +      +  LI+G  KVG+ E+A++   +M  
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDL 525

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y  +++   +      A  +   M+     P IVTF++L+NG   SG  E 
Sbjct: 526 AGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLED 585

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +++  M  +GI+PN  T+  ++   C  N       ++  M   G  PD   YN L+ 
Sbjct: 586 GERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK R + EA  L +   + GF     SY+ LI G ++ K+++EA   + +M       
Sbjct: 646 GHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIA 705

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           +  +Y + +    E G  ++ ++L  +  E+ +V  T
Sbjct: 706 EKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 264/517 (51%), Gaps = 31/517 (5%)

Query: 50  FFIWAAKRKRLR--SFASNSAVISMLLKPNGFDLYWQTLDEL----RSGNVSVVSDVFFV 103
           FF WA  R   +  ++  NS +   +      + Y    DEL    R  + +     +  
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFT-----YGT 57

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ K     +A+   G+MK     P +  + +++           AL ++++M+ + 
Sbjct: 58  LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+   ++++I  L K  K ++A    + M Q G LP+K TYT+++  L +  + ++ +
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++F +M   G SP+ V Y  ++NG+CK  R+D+AL+L+R  +  G  P    YS LIDGL
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237

Query: 284 FRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            +  R+DEA    R++FE       DV++Y   I GL +AGK+ +A  +   M E G  P
Sbjct: 238 CKHDRHDEA----RELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAP 293

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   YN +I   C    + +A+ L  +  +R  +P     T+L+ G+C++  V++A  + 
Sbjct: 294 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVIL 353

Query: 402 NKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            +M E     PSV  ++A+IDGLCKA  L+ A ++  KM             +    V D
Sbjct: 354 ERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKM-------------RRAGCVPD 400

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   +++ +C  G + +A ++  ++ E G   D++ YN LI G+C+   ++ A+ + +
Sbjct: 401 VVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIE 460

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           E+  +G++P+ V+  T+++GL +  R E+A  +  +M
Sbjct: 461 EMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 233/489 (47%), Gaps = 45/489 (9%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           Q + Y  N++L +         A  V+ + +     P+  T+  LI G  K+ +   A+ 
Sbjct: 14  QHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVN 73

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +L EM   GI P   T+  +I  LC++N  D+A ++F +M D    PD   Y  ++   C
Sbjct: 74  LLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLC 133

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K+ ++D A +      + G +P   +Y+ L+  LF+A ++++ +  + +M  +   P++V
Sbjct: 134 KINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 193

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP---------------------------- 341
            Y  ++ G  +AG++  A+ L+  ++  G  P                            
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA 253

Query: 342 -----DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
                D   Y + I G C  G LD+A+++ V++ +    P+  ++ ++I  +C++  V +
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A++L ++  +  C P V +   L+DGLCK+  +E+A ++              R+ + G+
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE------------RMLETGD 361

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           R     +   +++  C A  +  AY +L ++  +G +PD++TY ++I+ FCKVG ++ A 
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +LF+ +  +G   D V Y  LI G  R  + ++A  +  +M   G  P+     +++   
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481

Query: 577 CRRRKFSLA 585
           C+  +   A
Sbjct: 482 CKESRVEEA 490



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 197/412 (47%), Gaps = 34/412 (8%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           ++I  L + N  D   Q   ++    V   + ++ V+I    K+   + A   F +M + 
Sbjct: 92  SLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQS 151

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
            C PD   Y  +++  F+   +     ++ EM+     P +VT++ ++NG  K+G+ + A
Sbjct: 152 GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQA 211

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF--------------------- 226
           + ++  +   G  P+   Y+ +I GLC+ +R DEA  LF                     
Sbjct: 212 LSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSFISGLC 271

Query: 227 ------------LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                       +KM ++GC+PD V+YN ++   CK  RV EA  L+    +   +P + 
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 331

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             + L+DGL +++R +EA     +M E     P VV Y  +I GL +A ++ DA  +L  
Sbjct: 332 VCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQK 391

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR  G VPD   Y A+I  FC +G LD+AR L   + +R    +   + ILI G CR   
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           VD+A  +  +M   G  P+V   + ++DGLCK   +E+A LL  KM     P
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLP 503



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 222/494 (44%), Gaps = 58/494 (11%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY  +I G C+  +  +A  L  +MK +G +P  V + +L+   C+L   D+AL +
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                     P    Y+ +I  L +  + D A +++ +M +    PD V Y V++  L +
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           A K +   ++  +M  +G  P+   Y  ++ G+C  G +DQA SL   +      P+   
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           ++ LI G+C++   D+A++LF     AG    V ++ + I GLCKAG+L++A  +  KM 
Sbjct: 230 YSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E G  P              D  S   ++   C    + +A +++ Q  E   +P +   
Sbjct: 288 EAGCAP--------------DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 333

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-PDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
             L++G CK   +  A  + + +   G R P  VTY  +I+GL + DR +DA+ +  +M 
Sbjct: 334 TVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMR 393

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + GC P    Y +++   C+                   GR DE+ +  +   ++G    
Sbjct: 394 RAGCVPDVVTYTAIIDAFCK------------------VGRLDEARELFQRMHERGCA-- 433

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL-- 676
                           +  Y I + G C+  +V EA+   +++ E       P+ V L  
Sbjct: 434 --------------LDVVAYNILIRGYCRAAKVDEAI---AMIEEMAGRGIQPNVVSLST 476

Query: 677 -IHGLCKRGYLDLA 689
            + GLCK   ++ A
Sbjct: 477 IVDGLCKESRVEEA 490



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 206/477 (43%), Gaps = 60/477 (12%)

Query: 275 SYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +Y+C  L++       + EAY  ++        PD   YG +IRG  +A ++  A+ LL 
Sbjct: 17  TYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLG 76

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+  GI P    + +LI+  C+L   D+A  +  ++      P+   +T++I  +C+  
Sbjct: 77  EMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 136

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            +D A   F +M ++GC P    +  L+  L KA + E+ + +F +M   G +P L    
Sbjct: 137 KLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL---- 192

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  T+V  YC AG I +A  ++ +L  +G  P    Y++LI+G CK   
Sbjct: 193 ----------VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A +LF+     G   D + Y + I+GL +  + ++A  +  +M + GC P P  Y  
Sbjct: 243 HDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 300

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           ++   C+  + S A  L            D++M+              + G         
Sbjct: 301 IIYSLCKDNRVSEAKELM-----------DQAME-----------RKCMPG--------- 329

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
              +   T+ + GLC+  +V+EA  I   ++E       PS V    +I GLCK   LD 
Sbjct: 330 ---VPVCTVLVDGLCKSRRVEEACVILERMLETGD--RAPSVVTYSAVIDGLCKADRLDD 384

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           A  V     + G +  P V  Y      F K  +   A  L  RM   G  LD   Y
Sbjct: 385 AYVVLQKMRRAGCV--PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 39/280 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K +  D   + L E+ +G+V  V  V+   ISG  K G  ++A     KM E
Sbjct: 231 STLIDGLCKHDRHD-EARELFEMAAGDVQDVI-VYTSFISGLCKAGKLDEAKAVHVKMIE 288

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-------------------- 166
             C PD   YN ++    +      A  +  + ++  C+P                    
Sbjct: 289 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 348

Query: 167 ----------------NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
                           ++VT+S +I+GL K+ + + A  +L +M + G +P+  TYT +I
Sbjct: 349 ACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAII 408

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
              C++ R DEA  LF +M + GC+ D VAYN L+ G+C+  +VDEA+A++      G  
Sbjct: 409 DAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKM-FEEKIEPDVV 309
           P + S S ++DGL +  R +EA     KM FE   + D V
Sbjct: 469 PNVVSLSTIVDGLCKESRVEEARLLMEKMNFESLPDSDPV 508



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 165/383 (43%), Gaps = 51/383 (13%)

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G   +TY  N+L++ F + G   +A  +  +       P+  T+  LI G C+   +  A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
             L  +M+ AG  P++  F +LI  LC+    +KA  +F++M ++   P  FL       
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFL------- 124

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                     ++   C    +  A     ++ +SG LPD +TY  L++   K        
Sbjct: 125 -------YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           ++F+E+  KG  P+ VTY T++NG  +  R + A  +  ++   G +PS ++Y +L+   
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           C+                    R DE+ +  E  +  G+V++ I                
Sbjct: 238 CKH------------------DRHDEARELFE--MAAGDVQDVI---------------- 261

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT ++ GLC+ G++ EA  +   ++E      P S   +I+ LCK   +  A ++    
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321

Query: 697 LKNGFILRPRVCNYLLRSLLFSK 719
           ++   +    VC  L+  L  S+
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSR 344



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 44/246 (17%)

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           A  G   +  T NSL+  F   G    A ++FK+  +   RPD  TYGTLI G  + ++ 
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
             A  + G+M   G TP+   + SL+   C       A  ++ Q + D+  + D  + ++
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMI-DMKVKPDAFLYTV 127

Query: 608 ------------------EEFLQKG-------------------EVENAIQGLLEMDFKL 630
                             E  +Q G                   + E   Q   EM  K 
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLD 687
           +  +L  Y   + G C+ G++ +AL++   L   K     PS      LI GLCK    D
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRRL---KGTGRSPSGSLYSTLIDGLCKHDRHD 244

Query: 688 LAMDVF 693
            A ++F
Sbjct: 245 EARELF 250


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 285/564 (50%), Gaps = 53/564 (9%)

Query: 93  NVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           NV +  ++F    LI+GY K G   +A     +M ++D +P+ Y Y+ +++   R+ L  
Sbjct: 352 NVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVT 411

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A++VY EM+++    N+VT + L+ GL + G  E A+ +   M +RG+ P++ +Y  ++
Sbjct: 412 KAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             L ++     A  L+  +   G      A+N ++NGFCK+ ++ EA       ++ GF 
Sbjct: 472 DLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFE 531

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y  LIDG  +    +EA+    KM +E I P + LY  +I GL ++ K ++ M L
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           LS+M  +G+ P+   Y  LI G+CD G LD+A +   ++ ++   PN    + ++  + R
Sbjct: 592 LSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYR 651

Query: 391 NGMVDDAQKLFNKM-----------------------------------EKAGCFPSVGM 415
            G +D+A  L  KM                                    K+   P+  +
Sbjct: 652 LGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVV 711

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +N  I GLCK+G+++ A  +F         +L LR         D  +  T++  Y  AG
Sbjct: 712 YNIAIAGLCKSGKVDDAKKIF--------SSLLLR-----GFSPDNFTYCTLIHGYSAAG 758

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            ++ A+ +  ++ + G  P+IITYN+LING CK GN++ A KLF +L LKGL P+ ++Y 
Sbjct: 759 NVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYN 818

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            LI+G  +     +A  +  +M + G +PS   Y +L+   C++     A +L L  +R+
Sbjct: 819 ILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNL-LDEMRE 877

Query: 596 ISGRDDES--MKSIEEFLQKGEVE 617
           +    + +  +K +E  ++ GEV+
Sbjct: 878 LFADQNIAKFVKLVEGHVKCGEVK 901



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 198/748 (26%), Positives = 338/748 (45%), Gaps = 73/748 (9%)

Query: 21  ALEPLLPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNG 78
           AL+ L    S   + SV++K K NP     FF  A+K+   R +  S+  ++ +L +   
Sbjct: 50  ALKDLNFQFSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARM 109

Query: 79  FDLYWQTLDELRSGN-------------VSVVSD------VFFVLISGYYKVGDCEKALE 119
           +D     L+EL + +             V V  D      VF +++  Y + G  + AL 
Sbjct: 110 YDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALH 169

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F  M +  C P +   N +L+   RK     A+ VY  + +L  +P++ T S+++N   
Sbjct: 170 VFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC 229

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G   VA+  + EM   G   N  TY  +I G   I   + A  +   M + G   + V
Sbjct: 230 KDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKV 289

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEK-DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
               L+ G+C+  +++EA  +LR  E+ +G V    +Y  LIDG  R  + D+A     +
Sbjct: 290 TLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDE 349

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M    +  ++ +   +I G  + G+V +A +LL  M +  + P++Y Y+ L+ GFC  GL
Sbjct: 350 MLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGL 409

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           + +A S+  E+ +     N  T   L+ G+CR G  +DA  +++ M K G  P    +  
Sbjct: 410 VTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCT 469

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L+D L K GE  +A  L+  +           L++G  R     +  TM+  +C    + 
Sbjct: 470 LLDLLFKMGEFFRALALWNDI-----------LARGYGR--STYAFNTMINGFCKMEKMI 516

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A +   ++ E G  PD +TY +LI+G+CK+GN+  A K+ ++++ + + P    Y +LI
Sbjct: 517 EAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLI 576

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD--- 595
            GL +  +  +   +  +M   G +P+   Y +L+   C   +   AF+ +   +     
Sbjct: 577 GGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFA 636

Query: 596 ---------IS-----GRDDES------MKSIEEFLQKG---EVENAIQGLLE------- 625
                    +S     GR DE+      M +++ FL  G    +  A  G L+       
Sbjct: 637 PNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADT 696

Query: 626 MDFKLNDFQL---APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +D     F L     Y I + GLC+ G+V +A  IFS L+         +   LIHG   
Sbjct: 697 LDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSA 756

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            G ++ A  +    LK G  L P +  Y
Sbjct: 757 AGNVNDAFSLRDEMLKRG--LAPNIITY 782



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 184/687 (26%), Positives = 298/687 (43%), Gaps = 96/687 (13%)

Query: 94  VSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           + +V DVF   ++++ Y K G    A++   +M     + +V  YN++++          
Sbjct: 212 LGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMER 271

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKFTYTIVI 210
           A  V   M +   L N VT +LLI G  +  K E A K+L EM +  G++ +++ Y ++I
Sbjct: 272 AEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLI 331

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G C++ + D+A RL  +M + G   +    NAL+NG+CK  +V EA  LL         
Sbjct: 332 DGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE 391

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   SYS L+DG  R     +A + Y +M    I+ +VV +  +++GL   G  +DA+ +
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 331 LSDMRERGIVPD-----------------------------------TYCYNALIKGFCD 355
              M +RG+ PD                                   TY +N +I GFC 
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +  + +A      + +    P+  T+  LI G C+ G V++A K+  KMEK    PS+ +
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 416 FNALIDGL-----------------------------------CKAGELEKANLLFYKM- 439
           +N+LI GL                                   C  G L+KA   ++ M 
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI 631

Query: 440 EIGKNPTLFL------RLSQGGNRVHDKASLQTMV--EQYCTAGL---IHKA-------Y 481
           E G  P + +       L + G        LQ MV  + +   G    +HKA        
Sbjct: 632 EKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQ 691

Query: 482 KILMQLAESG---NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KI   L ES    +LP+ + YN  I G CK G ++ A K+F  L L+G  PD+ TY TLI
Sbjct: 692 KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDIS 597
           +G        DAF +  +M + G  P+   Y +L+   C+      A  L+ + +L+ ++
Sbjct: 752 HGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLA 811

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                    I+ + + G    A+    +M  +     L  Y+  + G C+ G + +A N+
Sbjct: 812 PNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNL 871

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRG 684
              + E  A       VKL+ G  K G
Sbjct: 872 LDEMRELFADQNIAKFVKLVEGHVKCG 898



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 151/641 (23%), Positives = 283/641 (44%), Gaps = 77/641 (12%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLL 174
            L  +  +K+ + Q   YI ++VL    + +   +A   ++++   + N  PN+ +   L
Sbjct: 44  VLGRYHALKDLNFQFSDYILDSVL---LKLKFNPIASLHFFKLASKQSNFRPNVNSHCKL 100

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++ LS++   +     L+E+    + P+K  Y+ ++         +E  R+F   +D   
Sbjct: 101 VHILSRARMYDETRSYLNEL----VTPSKNNYSSLVVW-------NELVRVF---EDFKF 146

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP    ++ +L  +C+   +  AL +  +  K G VP L S + L+  L R      A  
Sbjct: 147 SP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAIL 204

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            Y  +    I PDV    +M+    + G V  A+  + +M   G   +   YN+LI G  
Sbjct: 205 VYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCV 264

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSV 413
            +G +++A  +   + +R  L N  T T+LI G CR   +++A+K+  +ME++ G     
Sbjct: 265 SIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDE 324

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +  LIDG C+  +++ A  L  +M  +G    LF+                 ++  YC
Sbjct: 325 YAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI--------------CNALINGYC 370

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + +A ++LM++ +    P+  +Y++L++GFC+ G +  A+ ++ E+   G++ + V
Sbjct: 371 KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVV 430

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           T+ +L+ GL RV   EDA  ++  M + G TP    Y +L+    +  +F  A +LW   
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 593 LRDISGRDD-------------ESMKSIEEFLQK-----------------------GEV 616
           L    GR               E M   EE   +                       G V
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-- 674
           E A +   +M+ +     +  Y   + GL +  + +E +++ S +  C   ++P      
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM--CLKGLSPNVVTYG 608

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            LI G C  G LD A   +   ++ GF     +C+ ++ SL
Sbjct: 609 TLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSL 649



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 221/514 (42%), Gaps = 80/514 (15%)

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR--------------------KMFEE-K 303
           ++  F P + S+  L+  L RA+ YDE  ++                      ++FE+ K
Sbjct: 86  KQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFK 145

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P V  + ++++   E G +K+A+ +  +M + G VP     N L+      G    A 
Sbjct: 146 FSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAI 203

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +   I +   +P+  T +I++   C++G V+ A     +M+  G   +V  +N+LIDG 
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
              G++E+A ++             L+L      + +K +L  +++ YC    + +A K+
Sbjct: 264 VSIGDMERAEMV-------------LKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKV 310

Query: 484 LMQLAES-GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           L ++  S G + D   Y  LI+G+C+V  ++ A++L  E+   GLR +      LING  
Sbjct: 311 LREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYC 370

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  +  +A R+  +M      P    Y +LM   CR    + A S++             
Sbjct: 371 KNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVY------------- 417

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                 E L+ G   N +                 +   L GLC+ G  ++AL+++ +++
Sbjct: 418 -----NEMLRVGIQSNVV----------------THNSLLKGLCRVGAFEDALHVWHLML 456

Query: 663 ECKAIVTPP--SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
             K  VTP   S   L+  L K G    A+ ++   L  G+       N ++    F K 
Sbjct: 457 --KRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING--FCKM 512

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
            K + A     RMK +G++ D   Y   ++L+ G
Sbjct: 513 EKMIEAEETFNRMKELGFEPDGVTY---RTLIDG 543


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 291/631 (46%), Gaps = 61/631 (9%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M +  C P+   YN V+           AL +   M K    C P++V+F+ +I+G  K
Sbjct: 217 RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  +++EM Q+G+ P+  TY  ++  LC+    D+A  +  +M D G  PD + 
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y A+++G+       E+  + R     G +P + +++  +  L +  R  +A   ++ M 
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +   PD+V Y +++ G +  G+  D   L   M ++GIV + +C+N LI      G++D
Sbjct: 397 TKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMD 456

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  E+  +   P+  T++ LI   CR G + DA + F++M   G  P+  ++++LI
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLI 516

Query: 421 DGLCKAGELEKANLLFYKMEIGKNP--------TLFLRLSQGGNRVHDK----------- 461
            G C  G+L KA  L  +M     P        ++   L   G RV D            
Sbjct: 517 HGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEG-RVMDAHDVFNLVIHIG 575

Query: 462 -----ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +  ++++ YC  G + KA+ +L  +   G  PD++TYN+L++G+CK G I+  L
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+E+  K ++P +VTY  +++GL    R   A ++F +M  +G       YK L+   
Sbjct: 636 ILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGL 695

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           C                     R+D + ++I  F + G           MD K   F + 
Sbjct: 696 C---------------------RNDLTDEAITLFHKLG----------AMDCK---FDIT 721

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
                +  L +  + +EA ++F+ +     +    +   +IH L K G ++ A  +F   
Sbjct: 722 ILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSM 781

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            K+G     R+ N ++R LL   D  K   Y
Sbjct: 782 EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYY 812



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 236/485 (48%), Gaps = 18/485 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +I G++K G+  KA     +M +   +PDV  YN++++   + +    A  V  +MV
Sbjct: 267 FNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMV 326

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+ +T++ +I+G S SG  + + KM  +MT +G++P   T+   +S LC+  R+ 
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSK 386

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +F  M   G  PD V+Y+ LL+G+    R  +   L  S    G V     ++ LI
Sbjct: 387 DAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILI 446

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +    DEA   + +M  + + PDVV Y  +I      G++ DAM+  S M   G+ 
Sbjct: 447 SAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLE 506

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGMVDDAQK 399
           P+T  Y++LI GFC  G L +A+ L  E+  +    PN   F+ +I  +C  G V DA  
Sbjct: 507 PNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD 566

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +FN +   G  P++  FN+LIDG C  G++EKA  +L   + +G  P             
Sbjct: 567 VFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP------------- 613

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T+V  YC +G I     +  ++      P  +TY+ +++G    G  + A K+
Sbjct: 614 -DVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WS 576
           F E+   G   D  TY  L+ GL R D  ++A  +F ++    C     +  +++   + 
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732

Query: 577 CRRRK 581
            RRR+
Sbjct: 733 VRRRE 737



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/576 (23%), Positives = 253/576 (43%), Gaps = 34/576 (5%)

Query: 151 LALAVYYEMVKLNCLPNIV-----TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           L LA++  + +    P +      T+ +L++   ++ + ++       + + G+      
Sbjct: 134 LVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIE 193

Query: 206 YTIVISGLCQINRADEAYRLFL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
               +  LC   R DEA  + L +M D GC P+ ++YN ++   C   R  EAL +++  
Sbjct: 194 ANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRM 253

Query: 265 EKDG--FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
            K+G    P + S++ +I G F+     +A     +M ++ +EPDVV Y  ++  L +A 
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +  A  +L  M ++G+ PD   Y A+I G+   G   ++  +  ++  +  +P   TF 
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-- 440
             +  +C++G   DA+++F  M   G  P +  ++ L+ G    G     N LF+ M   
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433

Query: 441 --------------------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
                               +     L     QG     D  +  T++  +C  G +  A
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL-RPDSVTYGTLIN 539
            +   Q+   G  P+ + Y+SLI+GFC  G++  A +L  E+  KG+ RP+ V + ++I+
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
            L    R  DA  +F  +   G  P+   + SL+   C   K   AF + L  +  +   
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV-LDAMVSVGIE 612

Query: 600 DDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            D    +  +  + + G++++ +    EM  K        Y+I L GL   G+   A  +
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           F  +++    V   +   L+ GLC+    D A+ +F
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLF 708



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 183/376 (48%), Gaps = 36/376 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LIS + K G  ++A+  F +M+    +PDV  Y+ +++   R      A+  + +M+
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVISGLCQINRA 219
            +   PN V +  LI+G    G    A +++ EM  +GI  PN   ++ +I  LC   R 
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+ +F  +   G  P  V +N+L++G+C + ++++A  +L +    G  P + +Y+ L
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  ++ + D+    +R+M  +K++P  V Y +++ GL  AG+   A K+  +M + G 
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS------------------------- 374
             D   Y  L+KG C   L D+A +L  ++   D                          
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 375 ----------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
                     +PN  T+ ++I  + + G V++A  +F+ MEK+GC PS  + N +I  L 
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 425 KAGELEKANLLFYKME 440
           + G++ KA     K++
Sbjct: 802 QKGDIVKAGYYMSKVD 817



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 169/402 (42%), Gaps = 58/402 (14%)

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA-QKLFNKMEKAGCFPSV 413
           DLG    AR L+  +  R    NT     L C +C     D+A   L ++M   GC P+ 
Sbjct: 173 DLGPAFFARLLRAGLRTRTIEANT----FLKC-LCHAKRTDEAVDVLLHRMSDLGCVPNA 227

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N +I  LC     ++A  +  +M             +GG    D  S  T++  +  
Sbjct: 228 ISYNTVIKSLCGDSRSQEALDMVQRMA-----------KEGGRCSPDVVSFNTVIHGFFK 276

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + KA  ++ ++ + G  PD++TYNS+++  CK   ++ A  + +++  KG+ PD +T
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  +I+G       +++ ++F +M   G  P    + S M+  C+               
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKH-------------- 382

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
               GR  ++ +  +    KG + +                L  Y+I L G   +G+  +
Sbjct: 383 ----GRSKDAEEIFQYMTTKGHMPD----------------LVSYSILLHGYATEGRFAD 422

Query: 654 ALNIFSVLVECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
             N+F  + + K IV    C   LI    KRG +D AM VF  T   G  +RP V  Y  
Sbjct: 423 MNNLFHSMAD-KGIVANCHCFNILISAHAKRGMMDEAMLVF--TEMQGQGVRPDVVTYST 479

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
               F +  +   A     +M S+G + +  +Y    SL+ G
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVY---HSLIHG 518



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 6/252 (2%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  LD + S  +      +  L+SGY K G  +  L  F +M     +P    Y+ VL+ 
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDG 659

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F       A  +++EM+      +I T+ +L+ GL ++  T+ AI +  ++   G +  
Sbjct: 660 LFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL---GAMDC 716

Query: 203 KFTYTI---VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           KF  TI   VI+ L ++ R +EA  LF  +  SG  P+   Y  +++   K   V+EA  
Sbjct: 717 KFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADT 776

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +  S EK G  P     + +I  L +     +A  +  K+    I  +     +++   S
Sbjct: 777 MFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFS 836

Query: 320 EAGKVKDAMKLL 331
             GK ++ +K L
Sbjct: 837 SKGKHREQIKFL 848


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 241/474 (50%), Gaps = 20/474 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G +       A++ F +M E     D   Y  ++N   + +   LA+ ++ +M K 
Sbjct: 82  TLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KG 140

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           NC  ++ T+ ++I+ L K G T  A+ M  EM   GILP+   Y+ ++ GLC+  R  EA
Sbjct: 141 NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 200

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
              F +M+  G S D   YN+L++G  +     E    L      GF P   +++ LIDG
Sbjct: 201 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 260

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA      M  +  EPD++ Y  ++ GL   G+++DA KL   + +RGI  +
Sbjct: 261 LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YN LI G+C    +D+A  L  E+  +   P+T T+  LI  +C++G V  AQKLF 
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 380

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY---KMEIGKNPTLFLRLSQGGNRVH 459
           +M+  G F  +  +  L+DGLCK G LE+A  LF    K E   N  +F           
Sbjct: 381 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF----------- 429

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  +++  C AG + +A+K   +++++G  PD I YN LING C  G ++ A+KL 
Sbjct: 430 -----SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +++ KG  PDS+T+  +I  L + +   +A ++  +M     +P  AV   L+
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 229/476 (48%), Gaps = 48/476 (10%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+ VT + L+ G+        A+++ DEMT++G+  +  TY I+I+GLC+  +   A +L
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 226 FLKMK--------------DSGCS--------------------PDFVAYNALLNGFCKL 251
             KMK              DS C                     PD V Y++L++G C+ 
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            R+ EAL   +  E  G    + +Y+ LI GL RA  + E   +   M +    PD   +
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            ++I GL + GKV +A ++L  M  +G  PD   YN L+ G C +G L+ A  L   +  
Sbjct: 255 TILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 314

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R    N  ++ ILI G C++  +D+A +LF +M   G  PS   +N LI  LC++G +  
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  LF +M+       FL+LS          +   +++  C  G + +A  +   + ++ 
Sbjct: 375 AQKLFVEMQTCGQ---FLKLS----------TYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
           + P+I  ++ L++G C+ G +  A K F E+   GL PD++ Y  LINGL       +A 
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           ++  QM + GC P    +  ++    +  +   A  L L+ +R+ +   DE++ S+
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL-LEEMRNRNFSPDEAVTSM 536



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 234/517 (45%), Gaps = 88/517 (17%)

Query: 61  RSFASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R F  ++  ++ L+K     NG     Q  DE+    +   +  + +LI+G  K      
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++   KMK  +C+ DV+ Y  +++   +  +   AL ++ EM+    LP++V +S L++
Sbjct: 131 AIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 177 GLSKSGKTEVAIKMLDEMTQRGIL-----------------------------------P 201
           GL + G+ + A++   EM  RGI                                    P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + FT+TI+I GLC+  +  EA ++   M   G  PD + YN L+NG C + ++++A  L 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            S    G    + SY+ LI+G  + ++ DEA+  + +M  + ++P  V Y  +I  L ++
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+V+ A KL  +M+  G       Y  L+ G C  G L++A  L   I K +  PN   F
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           +IL+ GMCR G +++A K F+++ K G  P    +N LI+GLC  G L +A  L ++ME 
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME- 488

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                                                          E G LPD IT+N 
Sbjct: 489 -----------------------------------------------EKGCLPDSITFNV 501

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +I    K   I+ A++L +E++ +   PD      L+
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 247/531 (46%), Gaps = 51/531 (9%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           S    + +   A L+ F  LR V     +   F K GF P   + + L+ G++      +
Sbjct: 36  SNSKSEKIGTKASLSPFESLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPD 95

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + +M E+ +  D   YG++I GL +A K   A+KL   M+      D + Y  +I 
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIID 154

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C  G+  +A  +  E+     LP+   ++ L+ G+CR G + +A + F +ME  G   
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            V  +N+LI GL +AG             + K  T FL L        D  +   +++  
Sbjct: 215 DVYTYNSLIHGLSRAG-------------LWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A +IL  +   G  PDI+TYN+L+NG C VG +  A KLF+ L  +G++ + 
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            +Y  LING  +  + ++AFR+F +M   G  PS   Y +L+   C+  +   A  L+++
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 592 YLRDISGRDDESMKSIEEFL-------------QKGEVENAI---QGLLEMDFKLNDFQL 635
                       M++  +FL             + G +E AI   Q + + + K N   +
Sbjct: 382 ------------MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPN---I 426

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVF 693
             ++I L G+C+ G+++EA   F  +   K  + P +     LI+GLC +G L  A+ + 
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEI--SKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
               + G +      N ++++LL  K+N+   A  LL  M++  +  D  +
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLL--KENEIHEAIQLLEEMRNRNFSPDEAV 533



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 149/287 (51%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LI G  K G   +A +    M     +PD+  YN ++N          A  ++  +
Sbjct: 253 TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 312

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N+ ++++LING  K  K + A ++ +EM  +G+ P+  TY  +I  LCQ  R 
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRV 372

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A +LF++M+  G       Y  LL+G CK   ++EA+ L +S +K    P +  +S L
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSIL 432

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG+ RA + +EA+  + ++ +  +EPD + Y ++I GL   G + +A+KLL  M E+G 
Sbjct: 433 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 492

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           +PD+  +N +I+       + +A  L  E+  R+  P+    ++L+C
Sbjct: 493 LPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 539



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 116/294 (39%), Gaps = 51/294 (17%)

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR------- 546
           PD +T  +L+ G      I  A++LF E+  KGL  D+ TYG LINGL +  +       
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 547 ---------------------------EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
                                        +A  +F +M   G  P   VY SLM   CR 
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194

Query: 580 RKFSLAFSLWLQYLRDISGR----DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            +   A    L++ +++ GR    D  +  S+   L +  +   +   L +   + D   
Sbjct: 195 GRLKEA----LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL---MVDRGF 247

Query: 636 AP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           +P    +TI + GLC++G+V EA  I  ++          +   L++GLC  G L+ A  
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +F      G  L     N L+    + KD K   A+ L   M+  G       Y
Sbjct: 308 LFESLADRGIKLNVFSYNILING--YCKDQKIDEAFRLFEEMRPKGLKPSTVTY 359



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 66  NSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           N  V S+LL    +    +  W+  DE+    +   +  + +LI+G    G   +A++  
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M+E  C PD   +N ++    ++     A+ +  EM   N  P+    S+L+   S  
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFD 544

Query: 182 GKTEVAIKMLDEMTQRGI 199
            +   A+  L    Q+G+
Sbjct: 545 PQWHAALVSLPNALQKGV 562


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 270/601 (44%), Gaps = 63/601 (10%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           +P++  R F WA  +   R S     A++ +L + N     +  ++ + + N+  + DV 
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 102 F--------------VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
                          +LI  Y K    E+ L  F KM +    PDV   N +L I   K 
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD 213

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           L   A+ VY  M +    P IVT++ L++   K GK +  + +L EM +RG  PN  TY 
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I+GL +    ++A  L  +M  +G       YN L+ G+     + EAL+L       
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+  I GL +  R  +A      M    + PDVV Y  +I G    G +  A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             L  ++R   + P    YN L+ G C  G L+ A+ L+VE+      P+  T+TIL+ G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 388 MCRNGMVDDAQKLFNKMEKAGCF-----------------------------------PS 412
            C+ G +  AQ+ F++M   G                                     P 
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           + ++N ++DGLCK G LE+A+ L  KM           +S G   + D  +  +++  + 
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKM-----------VSDG--VIPDYVTYTSIIHAHL 560

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + K  +I  ++   G  P ++TY  LI+G    G +  A   F E+Q KG+ P+ +
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY +LINGL +V R + A+  F +M + G  P+   Y  L+  +C    +  A SL+ Q 
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680

Query: 593 L 593
           L
Sbjct: 681 L 681



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 228/494 (46%), Gaps = 50/494 (10%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA+E +  M EF  +P +  YN +L+   +       L +  EM +  C PN VT+++LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 176 NGLSKSGKTEVA-----------------------------------IKMLDEMTQRGIL 200
           NGLSK G+ E A                                   + + +EM  +G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   TY   I GLC++ R  +A +    M  +   PD V+YN L+ G+C+L  + +A  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                     P + +Y+ L+DGL R    + A     +M  E I PD+V Y +++ G  +
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G +  A +   +M   G+  D+Y Y   I G   LG   +A SLQ E+  +   P+   
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           + +++ G+C+ G +++A +L  KM   G  P    + ++I    + G L K   +FY+M 
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             G  P++               +   ++  +   G + +A+    ++ E G LP++ITY
Sbjct: 577 SKGLTPSV--------------VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITY 622

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           NSLING CKV  ++ A   F E+  KG+ P+  +Y  LIN    +   ++A  ++ QM  
Sbjct: 623 NSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD 682

Query: 560 NGCTPSPAVYKSLM 573
            G  P    + +L+
Sbjct: 683 RGVQPDSCTHSALL 696



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 181/354 (51%), Gaps = 4/354 (1%)

Query: 84  QTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           Q L ++ + N+   VVS  +  LI GY ++G+  KA   F +++     P +  YN +L+
Sbjct: 360 QQLSDMLANNLLPDVVS--YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              R+    +A  +  EM+     P+IVT+++L+NG  K G   +A +  DEM   G+  
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + + Y   I G  ++     A+ L  +M   G  PD + YN +++G CKL  ++EA  LL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           +    DG +P   +Y+ +I       R  +    + +M  + + P VV Y V+I G +  
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK 597

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+++ A    S+M+E+GI+P+   YN+LI G C +  +DQA +   E+ ++   PN +++
Sbjct: 598 GRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY 657

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           TILI   C  G   +A  L+ +M   G  P     +AL+  L K  +L+    L
Sbjct: 658 TILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 211/476 (44%), Gaps = 21/476 (4%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           ++  + + KM + ++ PDV     ++R L +   +  A+++   M E GI P    YN L
Sbjct: 181 EQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTL 240

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  +C  G + Q   L  E+ +R   PN  T+ +LI G+ + G  + A+ L  +M K G 
Sbjct: 241 LDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGL 300

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMV 468
             S   +N LI G    G L +A  L  +M + G +PT+              A+  + +
Sbjct: 301 KVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV--------------ATYNSFI 346

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G +  A + L  +  +  LPD+++YN+LI G+C++GN+  A  LF EL+   L 
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P  VTY TL++GL R    E A ++  +M   G  P    Y  L+  SC+    S+A   
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           + + L +    D  +  + I   L+ G+   A     EM  K     L  Y + + GLC+
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G ++EA  +   +V    I    +   +IH   + G L    ++F   L  G  L P V
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG--LTPSV 584

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
             Y +     +   +   A+     M+  G   +   Y    SL+ G    R M+ 
Sbjct: 585 VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITY---NSLINGLCKVRRMDQ 637



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 128/258 (49%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K     +  +  DE+    + + S  +   I G  K+GD  +A     +M      PD+ 
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 515

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           IYN V++   +      A  +  +MV    +P+ VT++ +I+   ++G+     ++  EM
Sbjct: 516 IYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEM 575

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             +G+ P+  TYT++I G     R + A+  F +M++ G  P+ + YN+L+NG CK+RR+
Sbjct: 576 LSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRM 635

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D+A        + G  P   SY+ LI+       + EA + Y++M +  ++PD   +  +
Sbjct: 636 DQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSAL 695

Query: 315 IRGLSEAGKVKDAMKLLS 332
           ++ L +  K++   +L S
Sbjct: 696 LKQLGKDCKLQAVRQLES 713



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 3/163 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I  + + G   K  E F +M      P V  Y  +++    K     A   + EM +  
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LPN++T++ LINGL K  + + A     EM ++GI PNK++YTI+I+  C +    EA 
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGF---CKLRRVDEALALLRS 263
            L+ +M D G  PD   ++ALL      CKL+ V +  +LL S
Sbjct: 675 SLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLDS 717


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 241/490 (49%), Gaps = 31/490 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+GY + G    AL     M      PD Y YN VL      + +  A A+  EM
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+ +C PN VTF+  I    ++G  + A+++LD M Q G  P+   Y+ +++G  +  R 
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L   M    C P+ + YNA L G C  +R ++   L+    +   +P   ++S L
Sbjct: 299 DDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
              L +    D A     +M +    PD V+Y  +I   SE G+V DA+KLL+ M     
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PC 412

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   +NA +KG C     D A  L V++ + D      TF ILI  +C+NG V++A +
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-----IGKNPTL-----FL 449
           +F +M K GC P +  +++LI+GL + G +E A  LF  M       G N  L       
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAA 532

Query: 450 RLSQGGNRVHDKA---------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           R    G  + + A         +   ++   C  GL+ +A ++  Q+ + G+ PDI TYN
Sbjct: 533 RWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYN 592

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +LINGF + G ++ A +L   +  K   PD+V+Y + + GL R +R ++A  +  +M + 
Sbjct: 593 ALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWKEAEEVVAEMLRM 649

Query: 561 GCTPSPAVYK 570
            C P+   +K
Sbjct: 650 KCPPNEVTFK 659



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 245/526 (46%), Gaps = 70/526 (13%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+VT++ LING  +SG+   A+ ++  M    + P+ +TY  V+ GLC   + ++A  L 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M  + C P+ V +   +  FC+   +D A+ LL          R+  Y C        
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLD---------RMPQYGC-------- 278

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
                              PDVV+Y  ++ G SE G+V DA++LL+ M  +   P+T CY
Sbjct: 279 ------------------TPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCK---PNTICY 317

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NA +KG C     +    L VE+ ++D LPN  TF++L   +C+NG+VD A ++  +M K
Sbjct: 318 NAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHK 377

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG---GNRVHDKAS 463
            GC P   ++N LI    + G ++ A  L   M    +   F    +G     R  D   
Sbjct: 378 YGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEE 437

Query: 464 L----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           L                  +++  C  G ++ A ++  Q+ + G  PDI+TY+SLING  
Sbjct: 438 LIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLS 497

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G +  A++LF+ +  K   PD   Y  ++ GL R  R EDA  +   M +  C P+  
Sbjct: 498 EQGLVESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEI 554

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            +  L+   C++     A  ++ Q  +  S  D  +  + I  F ++G +++A + L  M
Sbjct: 555 TFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM 614

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
             K +      Y   L GLC+  + KEA  + + ++  K    PP+
Sbjct: 615 SCKPDAVS---YNSALKGLCRAERWKEAEEVVAEMLRMKC---PPN 654



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 240/530 (45%), Gaps = 47/530 (8%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           VA N L+   C  RR+ +A  +L + +  G    + S++ L+ G  R  R  +A      
Sbjct: 113 VACNILIKKLCAQRRLADAERVLDALKAAGAADPV-SHNTLVAGYCRDGRLADAERLLAA 171

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
                   +VV Y  +I G   +G++ DA+ L++ M    + PDTY YN ++ G C    
Sbjct: 172 AGLSGAA-NVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQ 227

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            + A +L  E+ +    PN  TF   I   C+NG++D A +L ++M + GC P V +++ 
Sbjct: 228 WEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYST 287

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG---GNRVHD--------------- 460
           L++G  + G ++ A  L   M    N   +    +G     R  D               
Sbjct: 288 LVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLP 347

Query: 461 -KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            +A+   +    C  GL+  A ++L Q+ + G  PD + YN+LI  F + G ++ ALKL 
Sbjct: 348 NEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLL 407

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +      PD +++   + GL R +R +DA  +  QM +  C      +  L+   C+ 
Sbjct: 408 NSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQN 464

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            + + A  ++ Q  +     D  +  S I    ++G VE+AI+    M  K + F    Y
Sbjct: 465 GRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFG---Y 521

Query: 639 TIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
              L GLC+  + ++A  + S +   +C     PP+ +    LI+ LC++G +D A++VF
Sbjct: 522 NAVLKGLCRAARWEDAGELISNMARKDC-----PPNEITFNILINSLCQKGLVDRAIEVF 576

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL----CRMKSVGYD 739
               K G    P +  Y      FS+  +   A  LL    C+  +V Y+
Sbjct: 577 EQMPKYGST--PDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYN 624



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 6/247 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S +A +  L +   +D   + + ++   +  ++   F +LI    + G    A+E F +M
Sbjct: 418 SFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQM 477

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            ++ C PD+  Y++++N    + L   A+ ++  M    C P+I  ++ ++ GL ++ + 
Sbjct: 478 PKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARW 534

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A +++  M ++   PN+ T+ I+I+ LCQ    D A  +F +M   G +PD   YNAL
Sbjct: 535 EDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNAL 594

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NGF +  R+D+A  LL +       P   SY+  + GL RA+R+ EA     +M   K 
Sbjct: 595 INGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKC 651

Query: 305 EPDVVLY 311
            P+ V +
Sbjct: 652 PPNEVTF 658


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/643 (26%), Positives = 295/643 (45%), Gaps = 45/643 (6%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  +VG  ++ +  F KM+E DC P V  Y  +++  F     + A+ ++ EM +  
Sbjct: 45  LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C PNI T++++IN + K  K E   ++LDEM ++G++P+  TY  +I G C+    + A 
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M  + C+P+   YN L+ GFC+ + V  A+ALL    +    P + +Y+ LI G 
Sbjct: 165 EILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQ 224

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +    D AY     M E  + PD   Y V I  L + G++++A  L + ++E+GI  + 
Sbjct: 225 CKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANE 284

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y ALI G+C  G +D A SL   +   D LPN+ T+  LI G+C+   V +A  L   
Sbjct: 285 VIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMES 344

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M + G   +V  +  LI  + K G+ + A+ +  +M   G  P +++  +          
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA---------- 394

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                +  +CT G I +A  ++  + E G +PD +TY  +I+ +  +G +N A  + K +
Sbjct: 395 ----FIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450

Query: 523 QLKGLRPDSVTYGTLINGLQRVD-----------------------------REEDAFRI 553
              G  P   TY  LI  L + +                             + E A  +
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALEL 510

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQ 612
           F +M ++GC+P+   Y  L+   C+  +  +A  L+     R +S  +      +    +
Sbjct: 511 FEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCE 570

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G   +A++ +  M    +   L    +   GL ++G  ++A  +FS L++C       +
Sbjct: 571 LGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVA 630

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
              LI GL K G  D   ++       G  + P+    L+  L
Sbjct: 631 WKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 273/581 (46%), Gaps = 43/581 (7%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +V+  M K  C  N V+++ LI+GL + G+ +  I +  +M +    P   TYT+++ 
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            L +  R  EA  LF +M++ GC P+   Y  ++N  CK  +++E   +L    + G VP
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVP 142

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LIDG  +    + A      M      P+   Y  +I G      V  AM LL
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S M E  + P    YN+LI G C +G LD A  L   + +   +P+  T+++ I  +C+ 
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLF 448
           G +++A  LFN +++ G   +  ++ ALIDG CKAG+++ AN L  +M   +   N + +
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 449 LRLSQG---GNRVHDKASL-QTMVEQ--YCTA-------------GLIHKAYKILMQLAE 489
             L  G     +V +   L ++M+++   CT              G    A++IL Q+  
Sbjct: 323 NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           SG  PD+  Y + I+ FC  GNI  A  +   +  +G+ PD++TY  +I+    +     
Sbjct: 383 SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNP 442

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTW------SCRRRKFSLAFSLWLQYLRDISGRDDES 603
           AF +  +M   GC PS   Y  L+        + + +  +L  S+   +  D++  D   
Sbjct: 443 AFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVA--DVWK 500

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           M   E  L+        + +LE     N   +  Y   +IGLC+ G++  A  +F  + E
Sbjct: 501 MMKFETALE------LFEKMLEHGCSPN---INTYAKLIIGLCKVGRLGVAQKLFDHMNE 551

Query: 664 CKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
               V+P   +   L++  C+ G    A+ +    +++G +
Sbjct: 552 --RGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHL 590



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/607 (25%), Positives = 264/607 (43%), Gaps = 79/607 (13%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T +   + ++         F    +R    +  + + +I+ + K    +   + LDE+  
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             +      +  LI GY K G  E A E    M    C P+   YN ++    RK+    
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A+  +M++    P++VT++ LI+G  K G  + A ++L+ M + G++P+++TY++ I 
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257

Query: 212 GLCQINRADEAYRLFLKMKDSG-----------------------------------CSP 236
            LC+  R +EA  LF  +K+ G                                   C P
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   YNAL++G CK R+V EAL L+ S  + G    + +Y+ LI  + +   +D A+   
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M     +PDV +Y   I      G +K+A  ++S M ERG++PD   Y  +I  +  L
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGL 437

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV---------------------- 394
           GLL+ A  +   ++     P+ HT++ LI  + +  +                       
Sbjct: 438 GLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVAD 497

Query: 395 -------DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
                  + A +LF KM + GC P++  +  LI GLCK G L  A  LF  M E G +P+
Sbjct: 498 VWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPS 557

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                         +A   +++   C  G+   A +++  + E G+LP + + N L  G 
Sbjct: 558 --------------EAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGL 603

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            + G+   A  +F  L   G   D V +  LI+GL +    +    + G M   GC   P
Sbjct: 604 YEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP 663

Query: 567 AVYKSLM 573
             Y+ L+
Sbjct: 664 QTYRMLI 670



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 237/525 (45%), Gaps = 58/525 (11%)

Query: 209 VISGLCQI---------NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +++G C++         N  + A+ +F  M   GC  + V+Y  L++G C++ RVDE + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + +   +D   P + +Y+ ++  LF + R  EA   + +M E   EP++  Y VMI  + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  K+++  ++L +M E+G+VP    YNALI G+C  G+++ A+ +   +      PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+  LICG CR   V  A  L +KM ++   PSV  +N+LI G CK G L+         
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLD--------- 231

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                                                   AY++L  + E+G +PD  TY
Sbjct: 232 ---------------------------------------SAYRLLNLMNENGVVPDQWTY 252

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           +  I+  CK G I  A  LF  L+ KG++ + V Y  LI+G  +  + +DA  +  +M  
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVEN 618
             C P+ + Y +L+   C+ RK   A  L    + + +          I   L++G+ + 
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A + L +M        +  YT ++   C  G +KEA ++ S++ E   +    +   +I 
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
                G L+ A DV       G        + L++ LL  +  KK
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK 477



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 167/421 (39%), Gaps = 64/421 (15%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I  L K    +      + L+   +     ++  LI GY K G  + A     +M  
Sbjct: 253 SVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLT 312

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC P+   YNA+++   +++    AL +   M++      + T+++LI  + K G  + 
Sbjct: 313 EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++LD+M   G  P+ + YT  I   C      EA  +   M + G  PD + Y  +++
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR---AKRY-------------- 289
            +  L  ++ A  +L+     G  P   +YSCLI  L +    K+Y              
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFF 492

Query: 290 -DEAYAW-----------YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            D A  W           + KM E    P++  Y  +I GL + G++  A KL   M ER
Sbjct: 493 ADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER 552

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM--------- 388
           G+ P    YN+L+   C+LG+   A  L   + +   LP   +  +L CG+         
Sbjct: 553 GVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKA 612

Query: 389 --------------------------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
                                      +NG+ D   +L   ME  GC      +  LI+G
Sbjct: 613 KVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672

Query: 423 L 423
           L
Sbjct: 673 L 673



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA  + V  M+      +L+ + L+   S N+    + +  LI G  KVG    A + F 
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNI----NTYAKLIIGLCKVGRLGVAQKLFD 547

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M E    P   IYN++LN      ++  A+ +   M++   LP + + ++L  GL + G
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             E A  +   + Q G   ++  + I+I GL +   +D    L   M+  GC      Y 
Sbjct: 608 SKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYR 667

Query: 243 ALLNGF 248
            L+ G 
Sbjct: 668 MLIEGL 673


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ EMVK    P+IV F+ L++ + K  K +V I +  +M   GI  + +T+ IVI+
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C   +   A  +  KM   G  PD V   +L+NGFC+  RV +A++L+    + G+ P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +ID L + +R ++A  +++++  + I P+VV Y  ++ GL  +G+  DA +LL
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM +R I P+   Y+AL+  F   G + +A+ +  E+ +    P+  T++ LI G+C +
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A ++F+ M   GCFP V  +N LI+G CKA  +E    LF KM            
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM------------ 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V++  +  T+++ +   G + KA +   Q+   G  PDI TYN L+ G C  G 
Sbjct: 357 SQRG-LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL +F+++Q   +  D VTY T+I G+ +  + EDA+ +F  +   G  P    Y +
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTT 475

Query: 572 LMTWSCRR 579
           +M+  C +
Sbjct: 476 MMSGLCTK 483



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 233/446 (52%), Gaps = 15/446 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+  F +M +    P +  +N +L+   + + + + +++  +M  L    ++ TF+++IN
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                 +  +A+ +L +M + G  P++ T   +++G C+ NR  +A  L  KM + G  P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D VAYNA+++  CK RRV++AL   +   + G  P + +Y+ L++GL  + R+++A    
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R M + KI P+V+ Y  ++    + GKV +A ++  +M    I PD   Y++LI G C  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D+A  +   +  +   P+  ++  LI G C+   V+D  KLF KM + G   +   +
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 417 NALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N LI G  + G+++KA   F +M+  G +P ++              +   ++   C  G
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIW--------------TYNILLGGLCDNG 414

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           L+ KA  I   + +S    DI+TY ++I G CK G +  A  LF  L LKGL+PD VTY 
Sbjct: 415 LLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYT 474

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG 561
           T+++GL     + +   ++ +M Q G
Sbjct: 475 TMMSGLCTKGLQHEVEALYTKMKQEG 500



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 13/427 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    KM+    + D+Y +N V+N         LAL+V  +M+
Sbjct: 88  FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+ VT   L+NG  +  +   A+ ++D+M + G  P+   Y  +I  LC+  R +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A   F ++   G  P+ V Y AL+NG C   R ++A  LLR   K    P + +YS L+
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  +  EA   + +M    I+PD+V Y  +I GL    ++ +A ++   M  +G  
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN LI GFC    ++    L  ++ +R  + NT T+  LI G  + G VD AQ+ 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F++M+  G  P +  +N L+ GLC  G LEKA ++F  M             Q      D
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM-------------QKSEMDLD 434

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T+++  C  G +  A+ +   L+  G  PDI+TY ++++G C  G  +    L+ 
Sbjct: 435 IVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYT 494

Query: 521 ELQLKGL 527
           +++ +GL
Sbjct: 495 KMKQEGL 501



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 173/348 (49%), Gaps = 35/348 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++G+ +      A+    KM E   +PD+  YNA+++   + +    AL  + E+ +  
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV-------------- 209
             PN+VT++ L+NGL  SG+   A ++L +M +R I PN  TY+ +              
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 210 ---------------------ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
                                I+GLC  +R DEA ++F  M   GC PD V+YN L+NGF
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK +RV++ + L R   + G V    +Y+ LI G F+    D+A  ++ +M    + PD+
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y +++ GL + G ++ A+ +  DM++  +  D   Y  +I+G C  G ++ A  L   
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           +  +   P+  T+T ++ G+C  G+  + + L+ KM++ G   +  M 
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSML 508



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 207/432 (47%), Gaps = 24/432 (5%)

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R  +  +A   +R+M + +  P +V +  ++  + +  K    + L   M   GI  D 
Sbjct: 61  LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y +N +I  FC    +  A S+  ++ K    P+  T   L+ G CR   V DA  L +K
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M + G  P +  +NA+ID LCK   +  A L F+K EIG+           G R  +  +
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDA-LDFFK-EIGRK----------GIR-PNVVT 227

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +V   C +G  + A ++L  + +    P++ITY++L++ F K G +  A ++F+E+ 
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
              + PD VTY +LINGL   DR ++A ++F  M   GC P    Y +L+   C+ ++  
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 584 LAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----Y 638
               L+ +   R +          I+ F Q G+V+ A +   +MD     F ++P    Y
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD----SFGVSPDIWTY 403

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
            I L GLC +G +++AL IF  + + +  +   +   +I G+CK G ++ A  +F     
Sbjct: 404 NILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSL 463

Query: 699 NGFILRPRVCNY 710
            G  L+P +  Y
Sbjct: 464 KG--LKPDIVTY 473



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 157/313 (50%), Gaps = 6/313 (1%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G    G    A      M +    P+V  Y+A+L+   +    L A  ++ EMV
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +++  P+IVT+S LINGL    + + A +M D M  +G  P+  +Y  +I+G C+  R +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +  +LF KM   G   + V YN L+ GF ++  VD+A       +  G  P + +Y+ L+
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL      ++A   +  M + +++ D+V Y  +I+G+ + GKV+DA  L   +  +G+ 
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK 467

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y  ++ G C  GL  +  +L  ++ +   + N    ++L  G   +G +  + +L
Sbjct: 468 PDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND---SMLCLG---DGDITISAEL 521

Query: 401 FNKMEKAGCFPSV 413
             KM   G  PS+
Sbjct: 522 IKKMLSCGYAPSL 534



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 156/378 (41%), Gaps = 58/378 (15%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
           R+  + DA  LF +M K   FPS+  FN L+  + K  + +    L  KME+ G    L+
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 449 ----------------LRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
                           L LS  G  +      D+ ++ ++V  +C    +  A  ++ ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PDI+ YN++I+  CK   +N AL  FKE+  KG+RP+ VTY  L+NGL    R 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            DA R+   M +   TP+   Y +L+                                  
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALL---------------------------------- 267

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + F++ G+V  A +   EM     D  +  Y+  + GLC   ++ EA  +F ++V     
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               S   LI+G CK   ++  M +F    + G +      N L++      D  K  A 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDK--AQ 385

Query: 728 HLLCRMKSVGYDLDACLY 745
               +M S G   D   Y
Sbjct: 386 EFFSQMDSFGVSPDIWTY 403


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 179/664 (26%), Positives = 305/664 (45%), Gaps = 49/664 (7%)

Query: 27  PFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR---SFASNSAVISMLLKPNGFD--- 80
           P L  +    VI  +K P +G + F    K KRLR   +  + + +++ L++ N      
Sbjct: 139 PLLDTSLAAYVI--SKQPHLGHQIF---NKMKRLRFRPNLLTCNTLLNALVRSNSSHSLV 193

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
              +   +     V    + F +LI GY    + E+AL    +M E+ C PD   YN VL
Sbjct: 194 FSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVL 253

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               ++        +  +M      PN  T+++L++G  K    + A ++++ MT +G+L
Sbjct: 254 TALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGML 313

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ +TY  ++ GLC   + DEA RL  KM+     PD V YN L++G  + R  D A  L
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKL 373

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +   +  G      +++ +I       + DEA     KM E    PD   Y  MI G  +
Sbjct: 374 VEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCK 433

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AGK+ +A K++ +M  +G+  DT+  N L+   C    LD A +L ++  KR  + +  T
Sbjct: 434 AGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVT 493

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           +  LI G  ++   D A KL+ +M++ G   ++  +N +I GLC +G+ ++A + L   +
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E G  P              D+++   ++  YC  G + KA++   ++ E    PDI T 
Sbjct: 554 EKGLVP--------------DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTC 599

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N L+ G C+ G +   L LF     KG   D+VTY  +I+   +  R EDAF +  +M  
Sbjct: 600 NILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEG 659

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
               P    Y +++T   +                  +GR +E+ K   +F +KG+    
Sbjct: 660 KNLEPDRYTYNAIVTGLTK------------------AGRTEEAEKLALKFAEKGQQVKT 701

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
                E+    +D     Y+  +  LC  G+ K+A+ +F    +    +   + +KL+ G
Sbjct: 702 QDTSPELG--TSDMM---YSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDG 756

Query: 680 LCKR 683
           L KR
Sbjct: 757 LLKR 760



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 183/433 (42%), Gaps = 50/433 (11%)

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NAL++      L+      Q  + K    PN +TF ILI G C +   ++A +L N+M +
Sbjct: 181 NALVRSNSSHSLVFSREVFQDAV-KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGE 239

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            GC P    +N ++  LCK  +L +   L  +M   KN  LF           ++ +   
Sbjct: 240 YGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM---KNSGLF----------PNRNTYNI 286

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +V  YC    + +A +++  +   G LPD+ TYN+++ G C  G I+ A++L  +++   
Sbjct: 287 LVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L PD VTY TLI+G       + AF++  +M   G   +   +  ++ W C   K   A 
Sbjct: 347 LVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEAS 406

Query: 587 SLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGE-----VENAIQGLL 624
           ++ ++ +                    +G+  E+ K ++E  +KG        N +   +
Sbjct: 407 NVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466

Query: 625 EMDFKLND--------------FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            ++ +L+D                   Y   ++G  +D Q   AL ++  + E   + T 
Sbjct: 467 CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATI 526

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   +I GLC  G  D A+D     L+ G +      N ++    +    +K   +H  
Sbjct: 527 ITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNK 586

Query: 731 CRMKSVGYDLDAC 743
               S+  D+  C
Sbjct: 587 MVEHSLKPDIFTC 599



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 46/205 (22%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++I GY   G  EKA +   KM E   +PD++  N +L    R+ +    L ++   +  
Sbjct: 566 IIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISK 625

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               + VT++++I+   K  + E A  ++ EM  + + P+++TY  +++GL +  R +EA
Sbjct: 626 GKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685

Query: 223 YRLFLKMKDSG-------CSPDF------------------------------------- 238
            +L LK  + G        SP+                                      
Sbjct: 686 EKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSL 745

Query: 239 --VAYNALLNGFCKLRRVDEALALL 261
               Y  L++G  K R+     +LL
Sbjct: 746 NKYTYIKLMDGLLKRRKSFTTTSLL 770


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 275/577 (47%), Gaps = 55/577 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSKSGKTEVAI 188
           PDV+ YN +LN    +     AL + + M     +C P++V++S +ING  K G  +   
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
              +EM  + I PN  TY  +I+ LC+    D+A  +   M  SG  PD + YN++++GF
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 168

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C   +  EA+  L+    DG  P + +Y+ L+D L +  R  EA   +  M +  ++P++
Sbjct: 169 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEI 228

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             YG +++G +  G + +   LL  M   GI P+ Y ++ L+  +     +++A  +  +
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 288

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + ++   PN  T+  +I  +C++G V+DA   F +M   G  P   ++N+LI GLC   +
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348

Query: 429 LEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            E+A  L  +M    I  N   F                 ++++ +C  G + ++ K+  
Sbjct: 349 WERAEELILEMLDRGICLNTIFF----------------NSIIDSHCKEGRVIESEKLFD 392

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  PDIITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING  ++ 
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G +P    Y  ++    + R+ + A  L++   +  SGR      
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITK--SGR------ 504

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                                       +L+ Y I L GLC++    +AL +F  L    
Sbjct: 505 --------------------------QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +   +   +I  L K G  D A D+F+    NG +
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 575



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 255/537 (47%), Gaps = 44/537 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +K   ++ +M +    P+V  YN+++    + Q    A+ V   MV
Sbjct: 91  YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 150

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +P+ +T++ +++G   SG+ + AI  L +M   G+ P+  TY  ++  LC+  R  
Sbjct: 151 KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  P+   Y  LL G+     + E   LL    ++G  P    +S L+
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               + ++ +EA   + KM ++ + P+ V YG +I  L ++G+V+DAM     M + G+ 
Sbjct: 271 CAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 330

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+LI G C     ++A  L +E+  R    NT  F  +I   C+ G V +++KL
Sbjct: 331 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 390

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+ M + G  P +  ++ LIDG C AG++++A  L   M  +G  P              
Sbjct: 391 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP-------------- 436

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++  YC    +  A  +  ++  SG  PDIITYN ++ G  +      A +L+
Sbjct: 437 DCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 496

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +   G + +  TY  +++GL +    +DA R+F    QN C         LM      
Sbjct: 497 VGITKSGRQLELSTYNIILHGLCKNKLTDDALRMF----QNLC---------LMDLKLEA 543

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV----------ENAI-QGLLE 625
           R F++     L+      GR+DE+      F   G V          EN I QGLLE
Sbjct: 544 RTFNIMIDALLKV-----GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 595



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/590 (24%), Positives = 254/590 (43%), Gaps = 54/590 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+ L K    D   + L  +    V      +  ++ G+   G  ++A+    KM+ 
Sbjct: 127 NSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS 186

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  YN++++   +      A  ++  M K    P I T+  L+ G +  G    
Sbjct: 187 DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 246

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +LD M + GI PN + ++I++    +  + +EA  +F KM+  G +P+ V Y A++ 
Sbjct: 247 MHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIG 306

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  RV++A+        +G  P    Y+ LI GL    +++ A     +M +  I  
Sbjct: 307 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 366

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + + +  +I    + G+V ++ KL   M   G+ PD   Y+ LI G+C  G +D+A  L 
Sbjct: 367 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P+  T++ LI G C+   + DA  LF +ME +G  P +  +N ++ GL + 
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                A  L+                                                + 
Sbjct: 487 RRTAAAKELY------------------------------------------------VG 498

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + +SG   ++ TYN +++G CK    + AL++F+ L L  L+ ++ T+  +I+ L +V R
Sbjct: 499 ITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 558

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            ++A  +F     NG  P+   Y+ LM  +   +            + D     D  M +
Sbjct: 559 NDEAKDLFVAFSSNGLVPNYWTYR-LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 617

Query: 607 --IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL-IGLCQDGQVKE 653
             + E LQ+GE+  A   L  +D K   F L   T  L I L   G+ +E
Sbjct: 618 FIVRELLQRGEITRAGTYLSMIDEK--HFSLEASTASLFIDLLSGGKYQE 665



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 36/241 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+GY K+   + AL  F +M+     PD+  YN +L   F+ +    A  +Y  +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K      + T++++++GL K+  T+ A++M   +    +     T+ I+I  L ++ R 
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559

Query: 220 DEA------------------YRL-----------------FLKMKDSGCSPDFVAYNAL 244
           DEA                  YRL                 FL M+D+GC+ D    N +
Sbjct: 560 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    +   +  A   L   ++  F     + S  ID L    +Y E + +  + ++  I
Sbjct: 620 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYHRFLPEKYKSFI 678

Query: 305 E 305
           E
Sbjct: 679 E 679


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 250/501 (49%), Gaps = 37/501 (7%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +G  +VV+  +  LI GY + G  + AL     M      PD Y YN VL      + + 
Sbjct: 153 TGAANVVT--YTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWE 207

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  +  EM++  C PN VTF+  I    ++G  + A+++LD+M + G  P+   Y+ +I
Sbjct: 208 EAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLI 267

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +G  +    D+A  L   M    C P+ V YNA L G C   R ++   L+    + G  
Sbjct: 268 NGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCS 324

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++S LI  L +    D A     +M +   EPD V Y ++I  LSE G+V DA++L
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L+ M  +   PD   +NA++KGFC       A  L  ++++ D      TF ILI  +C+
Sbjct: 385 LNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQ 441

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF-- 448
           NG+V+ A ++F +M +  C P +  +++L++G  + G +E A  LF  M     P +F  
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPC--KPDIFSY 499

Query: 449 ----------LRLSQGGNRVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAE 489
                      R    G  + +         + +   ++   C  GL+ +A ++L Q+  
Sbjct: 500 NAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPN 559

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G+ PDI TYN+LINGF + G ++ ALKL   +  K   PD+++Y + + GL R +R +D
Sbjct: 560 YGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKGLCRAERWQD 616

Query: 550 AFRIFGQMPQNGCTPSPAVYK 570
           A  +  +M +N CTP+   +K
Sbjct: 617 AEELVAEMLRNKCTPNEVTFK 637



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 226/482 (46%), Gaps = 45/482 (9%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           ++ N L+   C  RR+ +A  +L + +       + S++ L+ G  R  R  +A    R 
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAADAV-SHNTLVAGYCRDGRLADAE---RV 146

Query: 299 MFEEKI--EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           +   +     +VV Y  +I G   +G++ DA++L++ M    + PDTY YN ++KG C  
Sbjct: 147 LGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIA 203

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
              ++A  L  E+ +    PN  TF   I   C+NG++D A +L ++M + GC P V ++
Sbjct: 204 KKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIY 263

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG---GNRVHD------------- 460
           + LI+G  + G +++A  L   M    N   +    +G     R  D             
Sbjct: 264 STLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGC 323

Query: 461 ---KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
              +A+   ++   C   L+  A ++L Q+ + G  PD + YN +IN   + G ++ AL+
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 383

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +  K   PD++ +  ++ G  R +R  DA  +  QM ++ C      +  L+   C
Sbjct: 384 LLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLC 440

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           +    + A  ++ Q  R     D  +  S +  F ++G VE AIQ    M  K + F   
Sbjct: 441 QNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS-- 498

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVK---LIHGLCKRGYLDLAMD 691
            Y   L GLC+  + ++A  + + +V  +C     PP+ V    LI+ LC++G +D A++
Sbjct: 499 -YNAVLKGLCRAARWEDAGELIAEMVGKDC-----PPNEVTFNILINSLCQKGLVDRAIE 552

Query: 692 VF 693
           V 
Sbjct: 553 VL 554


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 270/601 (44%), Gaps = 63/601 (10%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           +P++  R F WA  +   R S     A++ +L + N     +  ++ + + N+  + DV 
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 102 F--------------VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
                          +LI  Y K    E+ L  F KM +    PDV   N +L I   K 
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD 213

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           L   A+ VY  M +    P IVT++ L++   K GK +  + +L EM +RG  PN  TY 
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I+GL +    ++A  L  +M  +G       YN L+ G+     + EAL+L       
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+  I GL +  R  +A      M    + PDVV Y  +I G    G +  A
Sbjct: 334 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 393

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             L  ++R   + P    YN L+ G C  G L+ A+ L+VE+      P+  T+TIL+ G
Sbjct: 394 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 388 MCRNGMVDDAQKLFNKMEKAGCF-----------------------------------PS 412
            C+ G +  AQ+ F++M   G                                     P 
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           + ++N ++DGLCK G LE+A+ L  KM           +S G   + D  +  +++  + 
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKM-----------VSDG--VIPDYVTYTSIIHAHL 560

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + K  +I  ++   G  P ++TY  LI+G    G +  A   F E+Q KG+ P+ +
Sbjct: 561 ENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVI 620

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY +LINGL +V R + A+  F +M + G  P+   Y  L+  +C    +  A SL+ Q 
Sbjct: 621 TYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQM 680

Query: 593 L 593
           L
Sbjct: 681 L 681



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 228/494 (46%), Gaps = 50/494 (10%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA+E +  M EF  +P +  YN +L+   +       L +  EM +  C PN VT+++LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 176 NGLSKSGKTEVA-----------------------------------IKMLDEMTQRGIL 200
           NGLSK G+ E A                                   + + +EM  +G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   TY   I GLC++ R  +A +    M  +   PD V+YN L+ G+C+L  + +A  L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                     P + +Y+ L+DGL R    + A     +M  E I PD+V Y +++ G  +
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G +  A +   +M   G+  D+Y Y   I G   LG   +A SLQ E+  +   P+   
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           + +++ G+C+ G +++A +L  KM   G  P    + ++I    + G L K   +FY+M 
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             G  P++               +   ++  +   G + +A+    ++ E G LP++ITY
Sbjct: 577 SKGLTPSV--------------VTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITY 622

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           NSLING CKV  ++ A   F E+  KG+ P+  +Y  LIN    +   ++A  ++ QM  
Sbjct: 623 NSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD 682

Query: 560 NGCTPSPAVYKSLM 573
            G  P    + +L+
Sbjct: 683 RGVQPDSCTHSALL 696



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 4/352 (1%)

Query: 84  QTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           Q L ++ + N+   VVS  +  LI GY ++G+  KA   F +++     P +  YN +L+
Sbjct: 360 QQLSDMLANNLLPDVVS--YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLD 417

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              R+    +A  +  EM+     P+IVT+++L+NG  K G   +A +  DEM   G+  
Sbjct: 418 GLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLEL 477

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + + Y   I G  ++     A+ L  +M   G  PD + YN +++G CKL  ++EA  LL
Sbjct: 478 DSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 537

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           +    DG +P   +Y+ +I       R  +    + +M  + + P VV Y V+I G +  
Sbjct: 538 QKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK 597

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+++ A    S+M+E+GI+P+   YN+LI G C +  +DQA +   E+ ++   PN +++
Sbjct: 598 GRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY 657

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           TILI   C  G   +A  L+ +M   G  P     +AL+  L K  +L+  +
Sbjct: 658 TILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 191/417 (45%), Gaps = 18/417 (4%)

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + KM + ++ PDV     ++R L +   +  A+++   M E GI P    YN L+  +C 
Sbjct: 187 FDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCK 246

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G + Q   L  E+ +R   PN  T+ +LI G+ + G  + A+ L  +M K G   S   
Sbjct: 247 GGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYT 306

Query: 416 FNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +N LI G    G L +A  L  +M + G +PT+              A+  + +   C  
Sbjct: 307 YNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV--------------ATYNSFIYGLCKL 352

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A + L  +  +  LPD+++YN+LI G+C++GN+  A  LF EL+   L P  VTY
Sbjct: 353 GRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTY 412

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TL++GL R    E A ++  +M   G  P    Y  L+  SC+    S+A   + + L 
Sbjct: 413 NTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLH 472

Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           +    D  +  + I   L+ G+   A     EM  K     L  Y + + GLC+ G ++E
Sbjct: 473 EGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEE 532

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           A  +   +V    I    +   +IH   + G L    ++F   L  G  L P V  Y
Sbjct: 533 ASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG--LTPSVVTY 587


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 225/439 (51%), Gaps = 16/439 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G++ + +  KA+     +++F  QPDV+ YNA++N   +      A  V   M   +
Sbjct: 126 LIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 184

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ VT++++I  L   GK ++A+K+LD++      P   TYTI+I         DEA 
Sbjct: 185 FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEAL 244

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M   G  PD   YN ++ G CK   VD A  ++R+ E  G  P + SY+ L+  L
Sbjct: 245 KLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRAL 304

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +++E      KMF EK +P+VV Y ++I  L   GK+++AM LL  M+E+G+ PD 
Sbjct: 305 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 364

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y+ LI  FC  G LD A      +     LP+   +  ++  +C+NG  D A ++F K
Sbjct: 365 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 424

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           + + GC P+   +N +   L  +G+  +A +++   +  G +P              D+ 
Sbjct: 425 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP--------------DEI 470

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  +M+   C  G++ KA+++L+ +      P ++TYN ++ GFCK   I  A+ +   +
Sbjct: 471 TYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSM 530

Query: 523 QLKGLRPDSVTYGTLINGL 541
              G RP+  TY  LI G+
Sbjct: 531 VGNGCRPNETTYTVLIEGI 549



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 213/450 (47%), Gaps = 14/450 (3%)

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           + + + R   ++ +L +   MV+    P+++  + LI G         A+++++ + + G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             P+ F Y  +I+G C++NR D+A R+  +M+    SPD V YN ++   C   ++D AL
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            +L     D   P + +Y+ LI+        DEA     +M    ++PD+  Y  +IRG+
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + G V  A +++ ++  +G  PD   YN L++   + G  ++   L  +++     PN 
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T++ILI  +CR+G +++A  L   M++ G  P    ++ LI   C+ G L+ A      
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 389

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M           +S G   + D  +  T++   C  G   +A +I  +L E G  P+  +
Sbjct: 390 M-----------ISDGC--LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 436

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN++ +     G+   AL +  E+   G+ PD +TY ++I+ L R    + AF +   M 
Sbjct: 437 YNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR 496

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
                PS   Y  ++   C+  +   A  +
Sbjct: 497 SCEFHPSVVTYNIVLLGFCKAHRIEDAIDV 526



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 227/483 (46%), Gaps = 21/483 (4%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+     E+  L   M   G +PD +    L+ GF  LR V +A+ ++   EK G  P +
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI+G  +  R D+A     +M  +   PD V Y +MI  L   GK+  A+K+L  
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +      P    Y  LI+     G +D+A  L  E+  R   P+  T+  +I GMC+ GM
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLS 452
           VD A ++   +E  GC P V  +N L+  L   G+ E+   L  KM   K +P +     
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV----- 329

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   ++   C  G I +A  +L  + E G  PD  +Y+ LI  FC+ G +
Sbjct: 330 ---------VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 380

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A++  + +   G  PD V Y T++  L +  + + A  IFG++ + GC+P+ + Y ++
Sbjct: 381 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 440

Query: 573 MT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK 629
            +  WS   +    A  + L+ + +    D+ +  S I    ++G V+ A + L++M   
Sbjct: 441 FSALWSSGDK--IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSC 498

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  Y I L+G C+  ++++A+++   +V         +   LI G+   GY   A
Sbjct: 499 EFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEA 558

Query: 690 MDV 692
           M++
Sbjct: 559 MEL 561



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 188/375 (50%), Gaps = 4/375 (1%)

Query: 57  RKRLRSFASNSA----VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R R + F+ ++     +I  L      DL  + LD+L S N       + +LI      G
Sbjct: 179 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEG 238

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             ++AL+   +M     +PD++ YN ++    ++ +   A  +   +    C P++++++
Sbjct: 239 GVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +L+  L   GK E   K++ +M      PN  TY+I+I+ LC+  + +EA  L   MK+ 
Sbjct: 299 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 358

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD  +Y+ L+  FC+  R+D A+  L +   DG +P + +Y+ ++  L +  + D+A
Sbjct: 359 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 418

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + K+ E    P+   Y  M   L  +G    A+ ++ +M   GI PD   YN++I  
Sbjct: 419 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISC 478

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G++D+A  L V++   +  P+  T+ I++ G C+   ++DA  + + M   GC P+
Sbjct: 479 LCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPN 538

Query: 413 VGMFNALIDGLCKAG 427
              +  LI+G+  AG
Sbjct: 539 ETTYTVLIEGIGFAG 553



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 178/372 (47%), Gaps = 5/372 (1%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I+   K N  D   + LD +RS + S  +  + ++I      G  + AL+   
Sbjct: 155 FAYN-ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++   +CQP V  Y  ++     +     AL +  EM+     P++ T++ +I G+ K G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             + A +M+  +  +G  P+  +Y I++  L    + +E  +L  KM    C P+ V Y+
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+   C+  +++EA+ LL+  ++ G  P   SY  LI    R  R D A  +   M  +
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PD+V Y  ++  L + GK   A+++   + E G  P++  YN +       G  D+ 
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKI 451

Query: 363 RSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           R+L   +E+      P+  T+  +I  +CR GMVD A +L   M      PSV  +N ++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 421 DGLCKAGELEKA 432
            G CKA  +E A
Sbjct: 512 LGFCKAHRIEDA 523



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 199/465 (42%), Gaps = 58/465 (12%)

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R+  Y E+      M  +   PDV+L   +I+G      V  A++++  + + G  PD +
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVF 155

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YNALI GFC +  +D A  +   +  +D  P+T T+ I+I  +C  G +D A K+ +++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
               C P+V  +  LI+                                           
Sbjct: 216 LSDNCQPTVITYTILIEA------------------------------------------ 233

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            TM+E     G + +A K+L ++   G  PD+ TYN++I G CK G ++ A ++ + L+L
Sbjct: 234 -TMLE-----GGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLEL 287

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG  PD ++Y  L+  L    + E+  ++  +M    C P+   Y  L+T  CR  K   
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347

Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM--DFKLNDFQLAPYTI 640
           A +L L+ +++     D       I  F ++G ++ AI+ L  M  D  L D  +  Y  
Sbjct: 348 AMNL-LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--IVNYNT 404

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L  LC++G+  +AL IF  L E        S   +   L   G    A+ + L  + NG
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + P    Y        ++     A+ LL  M+S  +      Y
Sbjct: 465 --IDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 150/344 (43%), Gaps = 35/344 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I   +   G D   + LDE+ S  +      +  +I G  K G  ++A E    ++ 
Sbjct: 228 TILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLEL 287

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE- 185
             C+PDV  YN +L     +  +     +  +M    C PN+VT+S+LI  L + GK E 
Sbjct: 288 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 347

Query: 186 ----------------------------------VAIKMLDEMTQRGILPNKFTYTIVIS 211
                                             VAI+ L+ M   G LP+   Y  V++
Sbjct: 348 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 407

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+  +AD+A  +F K+ + GCSP+  +YN + +          AL ++     +G  P
Sbjct: 408 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDP 467

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ +I  L R    D+A+     M   +  P VV Y +++ G  +A +++DA+ +L
Sbjct: 468 DEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVL 527

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             M   G  P+   Y  LI+G    G   +A  L  ++ + +++
Sbjct: 528 DSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI+   + G  E+A+     MKE    PD Y Y+ ++    R+    +A+     M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   CLP+IV ++ ++  L K+GK + A+++  ++ + G  PN  +Y  + S L      
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  + L+M  +G  PD + YN++++  C+   VD+A  LL       F P + +Y+ +
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +A R ++A      M      P+   Y V+I G+  AG   +AM+L +D+     
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA 570

Query: 340 VPDTYCYNALIKGFCDLGLLDQA 362
           + + Y +  L + F  L +L ++
Sbjct: 571 ISE-YSFKRLHRTFPLLNVLQRS 592


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/477 (31%), Positives = 235/477 (49%), Gaps = 27/477 (5%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L SFG M +    P+   YN ++N   +  L   A A    M +    P+  T++ L+ G
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 178 LSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           L ++G    A  +  +M +R G   ++++YTI+I GLC   R D+A R+F KM    C P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               Y  LL+G CK+RRV EA ALL      G VP + +Y+ LI GL +  R+D+     
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM  ++  PD   Y  ++ GL + GKV    K+L +   +G+  +   YNALI G+C  
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKG 314

Query: 357 GLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           G +  A  + +++ KR+ + P   TF  +I G C  G V  A     +M  AG  P+   
Sbjct: 315 GDMKAALDV-LQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVT 373

Query: 416 FNALIDGLCKAGELEKANLLFYKME-----------------------IGKNPTLFLRLS 452
           FN+LI G C  GE + A  L   ME                       + +  +LF  L 
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLP 433

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             G + H+     ++V  YC  G I  A+ ++ ++A    +PD+ TYN+LI+G CKV  +
Sbjct: 434 MKGIKAHN-VIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRL 492

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           + A+ L  +++ +G+ P + T+  LI  +    +  DA +++ QM  +GC P    Y
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTY 549



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 282/640 (44%), Gaps = 74/640 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G    G  + A   F KM    C+P V+ Y  +L+   + +    A A+  EMV
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN+VT++ LI GL + G+ +   K+L++M  +   P+ +TYT V+ GLC+  +  
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
              ++  +    G + + + YNAL+NG+CK   +  AL +L+  +++   P + +++ +I
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G     +  +A A+  +M    + P+ V +  +I G    G+ K A++LL  M E G++
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y   I   CD G L++A SL   +  +    +   +T L+ G C+ G +D A  L
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT-----LFLRLSQG 454
             KM    C P V  +N LIDGLCK   L++A  L  KM + G  PT     + ++    
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523

Query: 455 GNRVHDKASL-QTMVEQYCTAGLIHKAYKI-----------------LMQLAESGNLPDI 496
             +  D A + + M+   C         KI                 ++++ E+G  PD+
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDV 583

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF----- 551
            TYN++I  +   G    A     ++    + PD  TY  L+N +   D + DAF     
Sbjct: 584 ETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD-DSDAFDNEKI 642

Query: 552 ----------RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
                      +F QM ++   P  + YK+L+   C + +                    
Sbjct: 643 WKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCR-------------------- 682

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
             ++ +E  L K +  + +     +D  ++D+ L  Y       C     +EA   F  +
Sbjct: 683 --LEEVEWLLLKMQGNSIL-----LDEDMSDYLLGCY-------CNLEMYREACEQFRSM 728

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
                     SC  L+ GLC  G   +A+ +F   L  G+
Sbjct: 729 AHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGY 768



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 241/558 (43%), Gaps = 64/558 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + V+  L K        + L E     V++    +  LI+GY K GD + AL+    MK 
Sbjct: 270 TQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKR 329

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P V  +N V++          A+A   +M      PN VTF+ LI+G    G+ ++
Sbjct: 330 NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKI 389

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++LD M + G+LP++ TY I I  LC   + +EA+ LF  +   G     V Y +L++
Sbjct: 390 ALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVH 449

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C++  +D A  L+     +  +P + +Y+ LIDGL + KR D A     KM ++ IEP
Sbjct: 450 GYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEP 509

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKL------------------------------------ 330
               + ++I+ +    K  DA K+                                    
Sbjct: 510 TTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDM 569

Query: 331 -LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            + +M E G+ PD   YNA+IK + D GL ++A    V++      P+  T++IL+  MC
Sbjct: 570 AVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMC 629

Query: 390 RNG------------MVD--DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
                          MVD  + Q+LF +M ++   P +  + AL+ GLC    LE+   L
Sbjct: 630 NKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWL 689

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             KM             QG + + D+     ++  YC   +  +A +    +A     P 
Sbjct: 690 LLKM-------------QGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPG 736

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + +   L++G C  G+   A+ +F ++   G   D V +  LI+ L           +  
Sbjct: 737 LKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLS 796

Query: 556 QMPQNGCTPSPAVYKSLM 573
            M    C  S   Y SL+
Sbjct: 797 VMDAKKCVASTRTYASLV 814



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 194/397 (48%), Gaps = 16/397 (4%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M + G  PN+ TY  +I+  C++    +A    ++M+++G +PD   YN L+ G C+   
Sbjct: 81  MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140

Query: 254 VDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           +  A  L     +  G      SY+ LI GL  A R D+A   + KM      P V  Y 
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           V++ GL +  +V +A  LL +M  +G+VP+   YNALI G C  G  D    L  ++  +
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+  T+T ++ G+C++G V    K+ ++    G    V  +NALI+G CK G+++ A
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAA 320

Query: 433 NLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +   M+  + NP +               +   ++  +C  G +HKA   L Q+A +G
Sbjct: 321 LDVLQLMKRNRVNPGV--------------QTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+ +T+NSLI+G C VG    AL+L   ++  G+ PD  TY   I+ L    + E+A 
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +F  +P  G      +Y SL+   C+      AF L
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 225/518 (43%), Gaps = 27/518 (5%)

Query: 237 DFVAYNALLNGFC----KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           D  ++NA L  +     +  R+   LA   +  K G  P   +Y+ LI+   +     +A
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIK 351
            A   +M E  + PD   Y  ++ GL  AG +  A  L   M  R G   D Y Y  LIK
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G +D A  +  ++ +    P  HT+T+L+ G+C+   V +A+ L  +M   G  P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +V  +NALI GLC+ G  +    L  KMEI ++               D  +   +V   
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP-------------DCWTYTQVVHGL 276

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G +    K+L +    G   +++TYN+LING+CK G++  AL + + ++   + P  
Sbjct: 277 CKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGV 336

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            T+  +I+G     +   A     QM   G +P+   + SL++  C   +  +A  L L 
Sbjct: 337 QTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRL-LD 395

Query: 592 YLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
            + +     D    +  I+    +G++E A      +  K        YT  + G CQ G
Sbjct: 396 LMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVG 455

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC- 708
            +  A  +   +     +    +   LI GLCK   LD A+D+     K G  + P  C 
Sbjct: 456 DIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG--IEPTTCT 513

Query: 709 -NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N L++ +L+  D K   A  +  +M S G   D   Y
Sbjct: 514 FNILIKQMLW--DKKHADAAKMYEQMISSGCKPDKQTY 549



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 14/243 (5%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL---- 178
           +M E    PDV  YNA++       L   A   + +M+ +   P+  T+S+L+N +    
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632

Query: 179 -SKSGKTEVAIKMLD---------EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            S +   E   KM+D         +M +    P   TY  ++ GLC   R +E   L LK
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLK 692

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+ +    D    + LL  +C L    EA    RS     F P L S   L+ GL  +  
Sbjct: 693 MQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGD 752

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           +  A + +  M       D V++ ++I  L E G     +++LS M  +  V  T  Y +
Sbjct: 753 HGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYAS 812

Query: 349 LIK 351
           L++
Sbjct: 813 LVR 815


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 183/732 (25%), Positives = 319/732 (43%), Gaps = 124/732 (16%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSF--ASNSAVISMLLKPNGFDLYWQTLDELRSGNV 94
           VI +  + ++  +FF WA+ R    S    ++S+++ +L     F      L+ +++ ++
Sbjct: 63  VIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHL 122

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLAL 153
               + F  LI  Y + G  ++AL+ F  ++E  +C P V   N++LN   +     +AL
Sbjct: 123 KPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVAL 182

Query: 154 AVYYEMVKLN---------------------------------------CLPNIVTFSLL 174
            +Y +M++ +                                       C+P++V ++++
Sbjct: 183 QLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMI 242

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ------------------- 215
           I+G  K G  + A + L E+  +G+LP   TY  +I+G C+                   
Sbjct: 243 IDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 302

Query: 216 -------------------INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
                              + +A E  R   +M + GC PD   YN ++N  CK  R+ E
Sbjct: 303 NMNVKVFNNVIDAEFKYGLVTKAAETMR---RMAEMGCGPDITTYNTMINFSCKGGRIKE 359

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A   L   ++ G +P   SY+ L+    +   Y +A     ++ E   +PD+V YG  I 
Sbjct: 360 ADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIH 419

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G+   G++  A+ +   M E+G+ PD   YN L+ G C  G     + L  E+  R+  P
Sbjct: 420 GVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQP 479

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           + + F  L+ G  RNG +D+A K+F  + + G  P +  +NA+I G CK G++  A    
Sbjct: 480 DVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCL 539

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            KM             +  +   D+ +  T+++ Y     +  A K+  Q+ +    P++
Sbjct: 540 NKM-------------KNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 586

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITY SLINGFCK  ++  A K+F+ ++   L P+ VTY TL+ G  +  + E A  IF  
Sbjct: 587 ITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFEL 646

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M  NGC P+ A +                      YL +       S   IEE   K  +
Sbjct: 647 MLMNGCPPNDATF---------------------HYLINGLTNTATSPVLIEE---KDSM 682

Query: 617 ENAIQGLLE----MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           EN    +L+    M  +  D  +A Y   ++ LC+ G V  A  + + ++    ++    
Sbjct: 683 ENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVC 742

Query: 673 CVKLIHGLCKRG 684
              ++HGLC +G
Sbjct: 743 FTAMLHGLCHKG 754



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 153/647 (23%), Positives = 286/647 (44%), Gaps = 35/647 (5%)

Query: 83  WQ-TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF--GKMKEFDCQPDVYIYNAV 139
           WQ +L+   + +  VVSDV   +I    +V D E AL+ F     + F C  D   ++++
Sbjct: 41  WQDSLESRFAESKVVVSDVAHFVID---RVHDAELALKFFDWASTRPFSCSLDGVAHSSL 97

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RG 198
           L +    ++F     V   M   +  P    FS LI    +SG  + A+++   + +   
Sbjct: 98  LKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHN 157

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKM----KDSGCSPDFVAYNALLNGFCKLRRV 254
            LP       +++GL +  + D A +L+ KM      +G   D    + ++ G C L ++
Sbjct: 158 CLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKI 217

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           +E   L++     G VP +  Y+ +IDG  +      A    +++  + + P V  YG +
Sbjct: 218 EEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGAL 277

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I G  +AG+ +   +LL++M  RG+  +   +N +I      GL+ +A      + +   
Sbjct: 278 INGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGC 337

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKAN 433
            P+  T+  +I   C+ G + +A +   K ++ G  P+   +  L+   CK G+ ++ A 
Sbjct: 338 GPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAG 397

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +LF   EIG+ P              D  S    +      G I  A  +  ++ E G  
Sbjct: 398 MLFRIAEIGEKP--------------DLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVF 443

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD   YN L++G CK G       L  E+  + ++PD   + TL++G  R    ++A +I
Sbjct: 444 PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKI 503

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFL 611
           F  + + G  P    Y +++   C+  K + A S  L  ++++    DE   S  I+ ++
Sbjct: 504 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSC-LNKMKNVHHAPDEYTYSTVIDGYV 562

Query: 612 QKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           ++ ++ +A++    +++  FK N   +  YT  + G C+   +  A  +F  +     + 
Sbjct: 563 KQHDMSSALKMFGQMMKHKFKPN---VITYTSLINGFCKKADMIRAEKVFRGMKSFDLVP 619

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
              +   L+ G  K G  + A  +F   L NG        +YL+  L
Sbjct: 620 NVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 269/593 (45%), Gaps = 48/593 (8%)

Query: 188 IKMLDEMTQRGILPNKFTYT-IVISGLCQ--INRADEAYRLFLKMKDSG------CSPDF 238
           I++L     +  L ++F  + +V+S +    I+R  +A  L LK  D        CS D 
Sbjct: 33  IRILKTHQWQDSLESRFAESKVVVSDVAHFVIDRVHDA-ELALKFFDWASTRPFSCSLDG 91

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           VA+++LL      R   E   +L + +     P   ++S LI     +   D A   +  
Sbjct: 92  VAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHT 151

Query: 299 MFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER----GIVPDTYCYNALIKGF 353
           + E     P VV    ++ GL ++GKV  A++L   M +     G V D Y  + ++KG 
Sbjct: 152 VREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGL 211

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C+LG +++ R L  + W +  +P+   + ++I G C+ G +  A +   +++  G  P+V
Sbjct: 212 CNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTV 271

Query: 414 GMFNALIDGLCKAGELEKANLLFYKME-----------------------IGKNPTLFLR 450
             + ALI+G CKAGE E  + L  +M                        + K      R
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRR 331

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           +++ G    D  +  TM+   C  G I +A + L +  E G LP+  +Y  L++ +CK G
Sbjct: 332 MAEMGCG-PDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG 390

Query: 511 N-INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           + +  A  LF+  ++ G +PD V+YG  I+G+      + A  +  +M + G  P   +Y
Sbjct: 391 DYVKAAGMLFRIAEI-GEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIY 449

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMD 627
             LM+  C+  +F  A  L L  + D + + D  + +  ++ F++ GE++ AI+    + 
Sbjct: 450 NVLMSGLCKNGRFP-AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVII 508

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            K  D  +  Y   + G C+ G++ +AL+  + +          +   +I G  K+  + 
Sbjct: 509 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMS 568

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDL 740
            A+ +F   +K+ F  +P V  Y      F K    + A  +   MKS  +DL
Sbjct: 569 SALKMFGQMMKHKF--KPNVITYTSLINGFCKKADMIRAEKVFRGMKS--FDL 617



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 168/372 (45%), Gaps = 33/372 (8%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
             S  A I  ++     D+     +++    V   + ++ VL+SG  K G          
Sbjct: 411 LVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLS 470

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M + + QPDVY++  +++   R      A+ ++  +++    P IV ++ +I G  K G
Sbjct: 471 EMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFG 530

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+  L++M      P+++TY+ VI G  + +    A ++F +M      P+ + Y 
Sbjct: 531 KMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYT 590

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +L+NGFCK   +  A  + R  +    VP + +Y+ L+ G F+A + ++A + +  M   
Sbjct: 591 SLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMN 650

Query: 303 KIEPDVVLYGVMIRGLSEAG------KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
              P+   +  +I GL+         + KD+M+      ER ++ D +            
Sbjct: 651 GCPPNDATFHYLINGLTNTATSPVLIEEKDSME-----NERSLILDFFTM---------- 695

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
                   +  E W  D +   +  ++++C +C++GMVD AQ L  KM   G       F
Sbjct: 696 --------MLSEGW--DQVIAAYN-SVIVC-LCKHGMVDTAQLLLTKMLTKGFLIDSVCF 743

Query: 417 NALIDGLCKAGE 428
            A++ GLC  G+
Sbjct: 744 TAMLHGLCHKGK 755


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 293/637 (45%), Gaps = 52/637 (8%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY- 157
           DV++V I+    +G  +   +   +MKE               I FR+ +F++ +  Y  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKE-------------EGIVFRESIFMIIMKHYGK 159

Query: 158 -----EMVKLN--------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                + ++L         C P   ++ L++  L      +VA  +  +M  +G+ P  F
Sbjct: 160 AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF 219

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T+ IV+  LC  N  D A  L   M   GC P+ + Y  L++   +  +V EAL LL   
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G +P + +++ +I GL +  +  +A     +M      PD + YG ++ GL   GK+
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTI 383
            +A K+L  +      P+    N LI G+   G L +A+S   E        P+  T+ I
Sbjct: 340 NEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+C+ G +  A+ L N+M + GC P+V  +  L++GLCKAG LE+A L+ ++M   +
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS-AR 454

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             T+            +      ++   C    +H A  +L ++   G  PD+ TYNSLI
Sbjct: 455 GLTI------------NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            G CKV  I+ A +LF  + L G   ++VTY TLI+ L R    + A  +   M   GCT
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQG 622
                Y  L+   C+         L+ Q + D  G D  S    I    + G+V+NA + 
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL-VECKAIVTPPSCV--KLIHG 679
           L +   +     +  Y   L GLC+ G++KEALN+F  L VE    V P +      I  
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG---VRPDAFTYNTFISW 679

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            CK G ++ A   F   ++NGF+      N L+ +LL
Sbjct: 680 QCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLL 716



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 261/566 (46%), Gaps = 55/566 (9%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYN 137
           F L  + L +++   +     +F +++  Y K G   +A+     M+  + C+P    Y+
Sbjct: 128 FKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYD 187

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            VL I        +A  V+Y+M+     P + TF +++  L    + + A  +L +MT+ 
Sbjct: 188 LVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G +PN   Y  +I  L Q N+  EA +L  +M   GC PD   +N +++G CK+ ++ +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA---------------------YAWY 296
             L+      GF P   +Y  L+ GL R  + +EA                     Y   
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMS 367

Query: 297 RKMFEEK-----------IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            ++ E +            +PD+  Y +++ GL + G +  A  L+++M  RG  P+   
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  L+ G C  GLL++A  +  E+  R    N+  +  LIC +CR   V  A  L ++M 
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------EIGKNPTLFLRLSQGGNR 457
             GC P +  +N+LI GLCK   +++A  LF+ M         +  N  +   L +G  +
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 458 --------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                           DK +   +++ +C  G I K  ++  Q+   G   D I+ N +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG CKVG ++ A +  ++   +G  PD VTY +++NGL +V R ++A  +F ++   G  
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW 589
           P    Y + ++W C+    + A S +
Sbjct: 668 PDAFTYNTFISWQCKEGMVNDACSFF 693



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 255/564 (45%), Gaps = 49/564 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S   V+ +L+  N   +      ++ S  VS     F +++       + + A    
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  +Y  +++   +K     AL +  EM  + C+P++ TF+ +I+GL K 
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------- 228
            K   A K++D M  RG  P+  TY  ++ GLC+I + +EA ++ +K             
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 229 -------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                              M + G  PD   YN L++G CK   +  A  L+    + G 
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ L++GL +A   +EA     +M    +  + V+Y  +I  L    KV  A+ 
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LLS+M  +G  PD + YN+LI G C +  +D+A  L   +    ++ N  T+  LI  + 
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G    A  L N M   GC      +N LI   CK G +EK   L+ +M +        
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD------- 594

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
               G     D  S   M+   C  G +  A++ L      G +PDI+TYNS++NG CKV
Sbjct: 595 --GLGA----DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I  AL LF  LQ++G+RPD+ TY T I+   +     DA   F +  +NG  PS   +
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708

Query: 570 K----SLMTWSCRRRKFSLAFSLW 589
                +L+  S +   F +   LW
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDELW 732


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 230/438 (52%), Gaps = 15/438 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++V++S +ING    G+ +  +K++ EM  +G+ PN +TY  +I  LC+  + D+A R+
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M + G  PD V Y  L++GFCKL  +  A  L    EK   VP   +Y+ +I GL R
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  EA   + KMF   +EPD V Y  +I G  ++G+++ A  L + M + G+ P+   
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y AL  G C LG +D A  L  E+  +    N  T+  L+ G+C++G +  A KL  +ME
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
            AG +P    F  L+D  CK GE+ KA+ L  +M + G  PT+               + 
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI--------------TF 293

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  +C +G++    ++L  + E G +P+  TYNSL+  +C   N+    +++K +  
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCA 353

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G+ PDS TY  LI G  +    ++A+ +  +M + G   + + Y S++    +++K S 
Sbjct: 354 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISE 413

Query: 585 AFSLWLQYLRDISGRDDE 602
           A  L+ +  R+    D E
Sbjct: 414 ARELFEEMRREGMAADAE 431



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 201/396 (50%), Gaps = 15/396 (3%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  RG  P+  +Y+ VI+G C      +  +L  +M+  G  P+   YN+++   CK  +
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           VD+A  +LR     G VP    Y+ LIDG  +      AY  + +M +++I PD + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL   GK+ +A K+ + M  RG+ PD   Y  LI G+C  G +++A SL  ++ +  
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  T+T L  G+C+ G VD A +L ++M   G   ++  +N+L++GLCK+G + +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            L  +ME+ G  P              D  +  T+++ YC  G + KA+++L ++ + G 
Sbjct: 241 KLMEEMEVAGMYP--------------DTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P +IT+N L+NGFC  G +    +L   +  KG+ P++ TY +L+      +       
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           I+  M   G  P    Y  L+   C+ R    A+ L
Sbjct: 347 IYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFL 382



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 228/482 (47%), Gaps = 50/482 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           + R     VVS  +  +I+GY   G+ +K L+   +M+    +P++Y YN+++ +  +  
Sbjct: 2   KFRGDAPDVVS--YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG 59

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  V  EM+    +P+ V ++ LI+G  K G  + A K+ DEM ++ I+P+   YT
Sbjct: 60  KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI GLC+  +  EA ++F KM   G  PD V Y  L++G+CK   +++A +L     + 
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ L DGL +  + D A     +M  + ++ ++  Y  ++ GL ++G ++ A
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +KL+ +M   G+ PDT  +  L+  +C  G + +A  L  E+  R   P   TF +L+ G
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C +GM++D ++L   M + G  P+   +N+L+                           
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM--------------------------- 332

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                +QYC    +    +I   +   G +PD  TYN LI G C
Sbjct: 333 ---------------------KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K  N+  A  L KE+  KG    + +Y ++I G  +  +  +A  +F +M + G      
Sbjct: 372 KARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAE 431

Query: 568 VY 569
           +Y
Sbjct: 432 IY 433



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 199/377 (52%), Gaps = 8/377 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I +L K    D   + L E+ +  +   + V+  LI G+ K+G+ + A + F +M++
Sbjct: 49  NSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK 108

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y AV+    R    + A  V+ +M      P+ VT++ LI+G  KSG+ E 
Sbjct: 109 QRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEK 168

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + ++M Q G+ PN  TYT +  GLC++ + D A  L  +M   G   +   YN+L+N
Sbjct: 169 AFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVN 228

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   + +A+ L+   E  G  P   +++ L+D   +     +A+   R+M +  ++P
Sbjct: 229 GLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V+ + V++ G   +G ++D  +LL+ M E+GI+P+T  YN+L+K +C    +       
Sbjct: 289 TVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYC----IRNNMRCT 344

Query: 367 VEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            EI+K    R  +P+++T+ ILI G C+   + +A  L  +M + G   +   +N++I G
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKG 404

Query: 423 LCKAGELEKANLLFYKM 439
             K  ++ +A  LF +M
Sbjct: 405 FFKKKKISEARELFEEM 421



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 205/441 (46%), Gaps = 51/441 (11%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVV Y  +I G    G+++  +KL+ +M+ +G+ P+ Y YN++I   C  G +D A  +
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+  +  +P+T  +T LI G C+ G +  A KLF++MEK    P    + A+I GLC+
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G++ +A+ +F KM   G  P              D+ +  T+++ YC +G + KA+ + 
Sbjct: 128 CGKMMEADKVFNKMFSRGVEP--------------DEVTYTTLIDGYCKSGEMEKAFSLH 173

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            Q+ +SG  P+++TY +L +G CK+G ++ A +L  E+  KGL+ +  TY +L+NGL + 
Sbjct: 174 NQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
                A ++  +M   G  P    + +LM   C+  +   A  L                
Sbjct: 234 GNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL---------------- 277

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             + E L +G     I                 + + + G C  G +++   + + ++E 
Sbjct: 278 --LREMLDRGLQPTVI----------------TFNVLMNGFCMSGMLEDGERLLAWMLEK 319

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
             +    +   L+   C R  +    +++      G +      N L++    +++ K+ 
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKE- 378

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A+ L   M   G++L A  Y
Sbjct: 379 -AWFLHKEMAEKGFNLTASSY 398



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 162/354 (45%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           TT+     K  N Q  ++ F    K++ +  F + +AVI  L +        +  +++ S
Sbjct: 84  TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             V      +  LI GY K G+ EKA     +M +    P+V  Y A+ +   +      
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + +EM       NI T++ L+NGL KSG    A+K+++EM   G+ P+  T+T ++ 
Sbjct: 204 ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMD 263

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+     +A+ L  +M D G  P  + +N L+NGFC    +++   LL    + G +P
Sbjct: 264 AYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP 323

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ L+               Y+ M    + PD   Y ++I+G  +A  +K+A  L 
Sbjct: 324 NTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLH 383

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +M E+G       YN++IKGF     + +AR L  E+ +     +   + + +
Sbjct: 384 KEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 36/287 (12%)

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G+ PD+++Y+++ING+C  G +   LKL +E+Q+KGL+P+  TY ++I  L +  + +DA
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
            R+  +M   G  P   VY +L+   C+      A+ L+ +          E  + + +F
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM---------EKQRIVPDF 115

Query: 611 LQKGEVENAIQGL------LEMDFKLNDF-------QLAPYTIWLIGLCQDGQVKEALNI 657
           +    V   I GL      +E D   N             YT  + G C+ G++++A ++
Sbjct: 116 IAYTAV---ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSL 172

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
            + +V+        +   L  GLCK G +D A ++       G  L     N L+  L  
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLYPKT---KSLLPGPWNTREM 761
           S + ++  A  L+  M+  G      +YP T    +L+     T EM
Sbjct: 233 SGNIRQ--AVKLMEEMEVAG------MYPDTITFTTLMDAYCKTGEM 271



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 124/270 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+   L K    D   + L E+    + +    +  L++G  K G+  +A++   +M+ 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   +  +++   +    + A  +  EM+     P ++TF++L+NG   SG  E 
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             ++L  M ++GI+PN  TY  ++   C  N       ++  M   G  PD   YN L+ 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK R + EA  L +   + GF     SY+ +I G F+ K+  EA   + +M  E +  
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAA 428

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           D  +Y + +      G ++ A++L  +  E
Sbjct: 429 DAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 252/487 (51%), Gaps = 16/487 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  ++ G Y  G    A   F +M   D  PDV  +N VL+   +K   + + A+  +++
Sbjct: 83  YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVL 142

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K     N  T ++ I GL + G+ E A+ +++ M    I P+  TY  ++ GLC+ ++  
Sbjct: 143 KRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQ 201

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA +   +M + GC PD   YN +++G+CK   + EA  LL+     GFVP   +Y  LI
Sbjct: 202 EAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLI 261

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL      + A   + +   + ++PD+V+Y  +++GL   G +  A++++++M E G  
Sbjct: 262 NGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH 321

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD + YN +I G C +G +  A  +  +   +  LP+  TF  +I G C+   +D A +L
Sbjct: 322 PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQL 381

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
             +M   G  P    +N++++GLCKAG+ ++ N  F +M + G  P              
Sbjct: 382 VERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRP-------------- 427

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +   ++E +C    + +A  +++++++ G +PD I++N+LI+GFC+ G+++GA  LF
Sbjct: 428 NAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLF 487

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++L  KG    + T+  LI         + A +IFG+M   G  P    Y+ L+  SC+ 
Sbjct: 488 QKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKA 547

Query: 580 RKFSLAF 586
                A+
Sbjct: 548 ANVDRAY 554



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 162/631 (25%), Positives = 287/631 (45%), Gaps = 18/631 (2%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M  F C P    YNA+++          A  VY  M+     P+  T ++ I     +G+
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
             VA+++L  + +RG       Y  V+ GL       +A  LF +M      PD   +N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +L+  C+   + E+ ALL    K G      + +  I GL    R +EA A    M +  
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I PDVV Y  ++RGL +  KV++A + L  M  +G +PD + YN +I G+C   +L +A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  +   +  +P+  T+  LI G+C  G V+ A +LFN+ +     P + ++N+L+ GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C+ G +  A  +  +M E G +P ++              +   ++   C  G I  A  
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIW--------------TYNIVINGLCKMGNISDAAV 345

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           ++      G LPD+ T+N++I+G+CK   ++ AL+L + + + G+ PD++TY +++NGL 
Sbjct: 346 VMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLC 405

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  + ++    F +M   GC P+   Y  L+   C+  +   A  + ++  +D    D  
Sbjct: 406 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTI 465

Query: 603 SMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           S  + I  F + G+++ A     ++D K        + I +        ++ A  IF  +
Sbjct: 466 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 525

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS-KD 720
           +         +   L+ G CK   +D A       +  GF+        +L SL  + + 
Sbjct: 526 ISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRV 585

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
           ++ V   H++ RM  V   +D  L    K +
Sbjct: 586 SEAVAIIHIMVRMGVVPEVVDTILSTDKKEI 616



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 217/447 (48%), Gaps = 17/447 (3%)

Query: 89  LRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           + S +  +  DV  +  L+ G  K    ++A +   +M    C PD + YN +++   ++
Sbjct: 173 VESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
            +   A  +  + +    +P+ VT+  LINGL   G  E A+++ +E   + + P+   Y
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ GLC+      A ++  +M + GC PD   YN ++NG CK+  + +A  ++     
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G++P + +++ +IDG  +  + D A     +M+   I PD + Y  ++ GL +AGK K+
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
             +   +M  +G  P+   YN LI+ FC +  L++A  + V + +   +P+T +F  LI 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G CRNG +D A  LF K+++ G   +   FN LI        ++ A  +F +M   G  P
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            L+              + + +V+  C A  + +AY  L ++   G +P + T+  ++N 
Sbjct: 533 DLY--------------TYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNS 578

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSV 532
                 ++ A+ +   +   G+ P+ V
Sbjct: 579 LAMNHRVSEAVAIIHIMVRMGVVPEVV 605



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 241/529 (45%), Gaps = 58/529 (10%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P   +Y+ ++D L     +D+A+  Y +M    + PD   + V I+     G+   A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 328 MKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           ++LL  + ERG  + P  YC   +++G    G    AR L  E+ +RD  P+  TF  ++
Sbjct: 65  LRLLRSLPERGCDVKPLAYC--TVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C+ G + ++  L  K+ K G   +    N  I GLC+ G LE+A  L   M+    P
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP 182

Query: 446 TL---------------------FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            +                     +LR       + D  +  T+++ YC   ++ +A ++L
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                 G +PD +TY SLING C  G++  AL+LF E Q K L+PD V Y +L+ GL R 
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF-----SLWLQYLRDISGR 599
                A ++  +M ++GC P    Y  ++   C+    S A      ++   YL D+   
Sbjct: 303 GLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEAL 655
           +      I+ + ++ ++++A+Q L+E   ++  + +AP    Y   L GLC+ G+ KE  
Sbjct: 363 N----TMIDGYCKRLKLDSALQ-LVE---RMWMYGIAPDAITYNSVLNGLCKAGKAKEVN 414

Query: 656 NIFS--VLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             F   +L  C+     P+ +    LI   CK   L+ A  V +   ++G +      N 
Sbjct: 415 ETFEEMILKGCR-----PNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNT 469

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTR 759
           L+    F ++     AY L  ++   GY   A     T ++L G ++++
Sbjct: 470 LIHG--FCRNGDLDGAYLLFQKLDEKGYSATA----DTFNILIGAYSSK 512



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +G  L +Q LDE      S  +D F +LI  Y    + + A + FG+M     +PD+Y Y
Sbjct: 481 DGAYLLFQKLDE---KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTY 537

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             +++ + +      A     EMV    +P++ TF  ++N L+ + +   A+ ++  M +
Sbjct: 538 RVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVR 597

Query: 197 RGILP 201
            G++P
Sbjct: 598 MGVVP 602


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 290/598 (48%), Gaps = 40/598 (6%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V V ++ F +LI G        +A+   GKMK+F C PD   YN +L++  +K     A 
Sbjct: 208 VKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEAR 267

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  +M     LPN  TF++L++G  K G  + A +++D M Q  +LP+ +TY ++I GL
Sbjct: 268 DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGL 327

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  + DEA+RL  +M++    PD V YN L+NG        +   L+   E  G  P  
Sbjct: 328 CKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNA 387

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ ++    +  + D A    RKM E    PD V +  +I G  +AG++ +A +++ +
Sbjct: 388 VTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDE 447

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  +G+  ++   N ++   C    LD A  L     KR    +  ++  LI G  ++G 
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLS 452
             +A KL+++M++    PS+  +N +I GLC +G+ +++ + L   +E G  P       
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP------- 560

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D+ +  T++  YC  G + KA++   ++ +    PD+ T N L+ G C  G +
Sbjct: 561 -------DETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGML 613

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + ALKLF     KG   D+VTY T+I+GL + DR E+AF +  +M +    P    Y ++
Sbjct: 614 DKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAI 673

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF---- 628
                            L  L D +GR  E+ + +   +++G++++    L +       
Sbjct: 674 -----------------LSALAD-AGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSS 715

Query: 629 ---KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
              + +D     ++  +  LC  G+ K+A+++     +    +   + + L+ GL KR
Sbjct: 716 ETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKR 773



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 253/553 (45%), Gaps = 39/553 (7%)

Query: 55  AKRKRLRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
            K K    F  N   + ++ +L K    +     L ++++  +    + F +L+SGY K+
Sbjct: 236 GKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKL 295

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  ++A +    M + +  PDV+ YN ++    +      A  +  EM  L  LP++VT+
Sbjct: 296 GWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTY 355

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LING      +    +++D+M  +G+ PN  TY +V+    +  + D A     KM++
Sbjct: 356 NTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 415

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           SG SPD V +N L+NG+CK  R+ EA  ++    + G      + + ++  L   ++ D+
Sbjct: 416 SGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 475

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           AY       +     D V YG +I G  + GK  +AMKL  +M+E+ I+P    YN +I 
Sbjct: 476 AYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIG 535

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G  DQ+     E+ +   +P+  T+  +I G CR G V+ A +  NKM K    P
Sbjct: 536 GLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKP 595

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            +   N L+ GLC  G L+KA  LF              +S+G  +  D  +  T++   
Sbjct: 596 DLFTCNILLRGLCTEGMLDKALKLFNTW-----------ISKG--KAIDAVTYNTIISGL 642

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG----- 526
           C      +A+ +L ++ E    PD  TYN++++     G +  A +    +  +G     
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702

Query: 527 ------------------LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
                               P+SVT+   IN L    + +DA  +  +  Q G T   + 
Sbjct: 703 TISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKST 762

Query: 569 YKSLMTWSCRRRK 581
           Y SLM    +RRK
Sbjct: 763 YISLMEGLIKRRK 775



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 262/569 (46%), Gaps = 29/569 (5%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR---KQLFLLALAVYYEMVK 161
           I  Y        A + F +MK    +P++   N ++N   R   K    L+ A++ +++K
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           L    N  TF++LI G     K   AI ++ +M      P+  +Y  ++  LC+  + +E
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  L L MK++G  P+   +N L++G+CKL  + EA  ++    ++  +P + +Y+ LI 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +  + DEA+    +M   K+ PDVV Y  +I G  +        +L+  M  +G+ P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   YN ++K +   G +D A +   ++ +    P+  TF  LI G C+ G + +A ++ 
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-- 459
           ++M + G   +    N ++  LC   +L+ A    YK+           LS    R +  
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDA----YKL-----------LSSASKRGYFV 490

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D+ S  T++  Y   G   +A K+  ++ E   +P IITYN++I G C  G  + ++   
Sbjct: 491 DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKL 550

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            EL   GL PD  TY T+I G  R  + E AF+   +M +    P       L+   C  
Sbjct: 551 NELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAP- 637
                A  L+  ++      D  +  +I   L K +  E A   L EM+ K    +L P 
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK----KLGPD 666

Query: 638 ---YTIWLIGLCQDGQVKEALNIFSVLVE 663
              Y   L  L   G++KEA    S +VE
Sbjct: 667 CYTYNAILSALADAGRMKEAEEFMSRIVE 695



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 237/523 (45%), Gaps = 52/523 (9%)

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR---VDEALALLRSFEK 266
           I      NR   A ++F +MK     P+ +  N L+N   +      V  + A+     K
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G      +++ LI G     +  EA     KM +    PD V Y  ++  L + GK+ +
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A  LL DM+  G++P+   +N L+ G+C LG L +A  +   + + + LP+  T+ +LI 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G+C++G +D+A +L ++ME     P V  +N LI+G        K   L  KME      
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME------ 379

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                  G     +  +   +V+ Y   G +  A   L ++ ESG  PD +T+N+LING+
Sbjct: 380 -------GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK G ++ A ++  E+  KGL+ +SVT  T+++ L    + +DA+++     + G     
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 567 AVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDI-----SGRDDESMKSIEE 609
             Y +L+    +  K   A  LW            + Y   I     SG+ D+S+  + E
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 610 FLQKGEVENAI-----------QGLLEMDFKLND------FQLAPYT--IWLIGLCQDGQ 650
            L+ G V +             +G +E  F+ ++      F+   +T  I L GLC +G 
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           + +AL +F+  +     +   +   +I GLCK    + A D+ 
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLL 655



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 177/405 (43%), Gaps = 53/405 (13%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           NT+TF ILI G C    + +A  L  KM+   CFP    +N ++D LCK G+L +A  L 
Sbjct: 211 NTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL 270

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
             M   KN  L          + ++ +   +V  YC  G + +A +++  +A++  LPD+
Sbjct: 271 LDM---KNNGL----------LPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDV 317

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            TYN LI G CK G I+ A +L  E++   L PD VTY TLING          F +  +
Sbjct: 318 WTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDK 377

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLA-----------FS--------LWLQYLRDIS 597
           M   G  P+   Y  ++ W  +  K   A           FS        L   Y +  +
Sbjct: 378 MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK--A 435

Query: 598 GRDDESMKSIEEFLQKG-----EVENAIQGLLEMDFKLND-FQL-------------APY 638
           GR  E+ + ++E  +KG        N I   L  + KL+D ++L               Y
Sbjct: 436 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 495

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
              ++G  +DG+  EA+ ++  + E + I +  +   +I GLC  G  D ++D     L+
Sbjct: 496 GTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLE 555

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           +G +      N ++         +K   +H     KS   DL  C
Sbjct: 556 SGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTC 600


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 173/684 (25%), Positives = 304/684 (44%), Gaps = 50/684 (7%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F++ + +I      N  D+      +++         +F  LI G+ K G  + AL   
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK      D+ +YN  ++   +     +A   ++E+      P+ VT++ +I  L K+
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + + A++M + + +   +P  + Y  +I G     + DEAY L  + +  G  P  +AY
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N +L    K+ +VDEAL +    +KD   P L +Y+ LID L RA + D A+     M +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + P+V    +M+  L ++ K+ +A  +  +M  +   PD   + +LI G   +G +D 
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +  ++   D   N+  +T LI     +G  +D  K++  M    C P + + N  +D
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            + KAGE EK   +F +++  +              V D  S   ++     AG  ++ Y
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARR-------------FVPDARSYSILIHGLIKAGFANETY 572

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++   + E G + D   YN +I+GFCK G +N A +L +E++ KG  P  VTYG++I+GL
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            ++DR ++A+ +F +        +  +Y SL+    +                   GR D
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK------------------VGRID 674

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           E+   +EE +QKG   N                L  +   L  L +  ++ EAL  F  +
Sbjct: 675 EAYLILEELMQKGLTPN----------------LYTWNSLLDALVKAEEINEALVCFQSM 718

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            E K      +   LI+GLCK    + A   +    K G  ++P   +Y       +K  
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG--MKPSTISYTTMISGLAKAG 776

Query: 722 KKVHAYHLLCRMKSVGYDLDACLY 745
               A  L  R K+ G   D+  Y
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACY 800



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 169/686 (24%), Positives = 310/686 (45%), Gaps = 87/686 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I    K    D     LDE++S ++     ++ V I  + KVG  + A + F +++ 
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   Y +++ +  +      A+ ++  + K   +P    ++ +I G   +GK + 
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L+    +G +P+   Y  +++ L ++ + DEA ++F +MK    +P+   YN L++
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILID 385

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+  ++D A  L  S +K G  P + + + ++D L ++++ DEA A + +M  +   P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF------------- 353
           D + +  +I GL + G+V DA K+   M +     ++  Y +LIK F             
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505

Query: 354 -------C--DLGLL-------------DQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                  C  DL LL             ++ R++  EI  R  +P+  +++ILI G+ + 
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G  ++  +LF  M++ GC      +N +IDG CK G++ KA  L  +M+  G  PT+   
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKV 509
               G+ +   A +  + E Y           +L + A+S  +  +++ Y+SLI+GF KV
Sbjct: 626 ----GSVIDGLAKIDRLDEAY-----------MLFEEAKSKRIELNVVIYSSLIDGFGKV 670

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I+ A  + +EL  KGL P+  T+ +L++ L + +   +A   F  M +  CTP+   Y
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+   C+ RKF+ AF  W                  +E  ++G   + I         
Sbjct: 731 GILINGLCKVRKFNKAFVFW------------------QEMQKQGMKPSTIS-------- 764

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                   YT  + GL + G + EA  +F        +        +I GL        A
Sbjct: 765 --------YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSL 715
             +F  T + G  +  + C  LL +L
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTL 842



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 275/567 (48%), Gaps = 16/567 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T++  V+ K          F    K +R+    + + +I        FD  +  L+ 
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
            R+         +  +++   K+G  ++AL+ F +MK+ D  P++  YN ++++  R   
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGK 392

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +   M K    PN+ T +++++ L KS K + A  M +EM  +   P++ T+  
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I GL ++ R D+AY+++ KM DS C  + + Y +L+  F    R ++   + +      
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P L   +  +D +F+A   ++  A + ++   +  PD   Y ++I GL +AG   +  
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L   M+E+G V DT  YN +I GFC  G +++A  L  E+  +   P   T+  +I G+
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTL 447
            +   +D+A  LF + +      +V ++++LIDG  K G +++A L+  + M+ G  P L
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           +              +  ++++    A  I++A      + E    P+ +TY  LING C
Sbjct: 693 Y--------------TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           KV   N A   ++E+Q +G++P +++Y T+I+GL +     +A  +F +   NG  P  A
Sbjct: 739 KVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            Y +++       +   AFSL+ +  R
Sbjct: 799 CYNAMIEGLSNGNRAMDAFSLFEETRR 825



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/557 (24%), Positives = 246/557 (44%), Gaps = 50/557 (8%)

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L EM+  G  P+  T   ++ G  + N+  E Y +   M+     P F AY  L+  F
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
             +   D  L L +  ++ G+ P +  ++ LI G  +  R D A +   +M    ++ D+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           VLY V I    + GKV  A K   ++   G+ PD   Y ++I   C    LD+A  +   
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + K   +P T+ +  +I G    G  D+A  L  +    G  PSV  +N ++  L K G+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +++A  +F +M+    P L              ++   +++  C AG +  A+++   + 
Sbjct: 359 VDEALKVFEEMKKDAAPNL--------------STYNILIDMLCRAGKLDTAFELRDSMQ 404

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           ++G  P++ T N +++  CK   ++ A  +F+E+  K   PD +T+ +LI+GL +V R +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           DA++++ +M  + C  +  VY SL                                  I+
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSL----------------------------------IK 490

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F   G  E+  +   +M  +     L     ++  + + G+ ++   +F  +   + + 
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              S   LIHGL K G+ +   ++F    + G +L  R  N ++    F K  K   AY 
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG--FCKCGKVNKAYQ 608

Query: 729 LLCRMKSVGYDLDACLY 745
           LL  MK+ G++     Y
Sbjct: 609 LLEEMKTKGFEPTVVTY 625



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 158/648 (24%), Positives = 283/648 (43%), Gaps = 58/648 (8%)

Query: 110 KVGDCEKALESF---GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           ++ D  +A+E F    +  E    P+ Y  N++L +  R + F     +  EM      P
Sbjct: 74  RLKDVNRAIEYFRWYERRTELPHCPESY--NSLLLVMARCRNFDALDQILGEMSVAGFGP 131

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++ T   ++ G  K+ K      ++  M +    P    YT +I     +N +D    LF
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M++ G  P    +  L+ GF K  RVD AL+LL   +       +  Y+  ID   + 
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            + D A+ ++ ++    ++PD V Y  MI  L +A ++ +A+++   + +   VP TY Y
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N +I G+   G  D+A SL      + S+P+   +  ++  + + G VD+A K+F +M+K
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
               P++  +N LID LC+AG+L+ A  L   M+      LF  +           ++  
Sbjct: 372 DAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQ---KAGLFPNVR----------TVNI 417

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           MV++ C +  + +A  +  ++      PD IT+ SLI+G  KVG ++ A K+++++    
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            R +S+ Y +LI       R+ED  +I+  M    C+P   +  + M    +        
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK-------- 529

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                     +G  ++     EE   +  V +A                  Y+I + GL 
Sbjct: 530 ----------AGEPEKGRAMFEEIKARRFVPDA----------------RSYSILIHGLI 563

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G   E   +F  + E   ++   +   +I G CK G ++ A  +       GF   P 
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF--EPT 621

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           V  Y       +K ++   AY L    KS   +L+  +Y    SL+ G
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY---SSLIDG 666



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 164/327 (50%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F ++K     PD   Y+ +++   +         ++Y M +  C+ + 
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++++I+G  K GK   A ++L+EM  +G  P   TY  VI GL +I+R DEAY LF +
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            K      + V Y++L++GF K+ R+DEA  +L    + G  P L +++ L+D L +A+ 
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +EA   ++ M E K  P+ V YG++I GL +  K   A     +M+++G+ P T  Y  
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G    G + +A +L         +P++  +  +I G+       DA  LF +  + G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLL 435
                     L+D L K   LE+A ++
Sbjct: 828 LPIHNKTCVVLLDTLHKNDCLEQAAIV 854



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 111/225 (49%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           +VI  L K +  D  +   +E +S  + +   ++  LI G+ KVG  ++A     ++ + 
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P++Y +N++L+   + +    AL  +  M +L C PN VT+ +LINGL K  K   A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
                EM ++G+ P+  +YT +ISGL +     EA  LF + K +G  PD   YNA++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
                R  +A +L     + G      +   L+D L +    ++A
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 169/596 (28%), Positives = 270/596 (45%), Gaps = 59/596 (9%)

Query: 180 KSG--KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           KSG  K   A  + + +      P   ++  ++  + +I R  +   L+ +M   G +PD
Sbjct: 67  KSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPD 126

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           F+  N L+N +C L +VD  LA+L    + G  P   +++ L+ GL    R  EA    R
Sbjct: 127 FITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLR 186

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG------IVPDTYCYNALIK 351
           KM      P+VV YG ++ GL   G    A+KL  +M          I P+  CY  +I 
Sbjct: 187 KMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIID 246

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C  GL+D+ + L +E+  R   P+   ++ +I GMC  G  + A+ LFN+M   G  P
Sbjct: 247 SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP 306

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +V  FN LID LCKAG++E+AN L   M + G++P  F              +  T+++ 
Sbjct: 307 NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF--------------TYNTLIDG 352

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C  G I  A  + + +   G   D ++YN LING+CK G +  A KL++E+  K + P 
Sbjct: 353 FCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPT 412

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +TY TL+ GL R  +  DA+ +FG+M  +  TP    Y  L+   C+    S A  L+ 
Sbjct: 413 VITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELF- 471

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                              +L+  + + +IQ                +   + GLC+  +
Sbjct: 472 ------------------HYLENHDFQPSIQ---------------IFNCLIDGLCKARK 498

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           ++ A  +F+ L          +   +IHGLCK G L+ A D+FL   + G        N 
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMSP 766
           L+R   F ++++      LL  M    +  DA        LL      RE  ++ P
Sbjct: 559 LMRG--FCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLP 612



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 235/490 (47%), Gaps = 27/490 (5%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ Y  +   +  L   G+M      P+   + +++           A  +  +MV++
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG------ILPNKFTYTIVISGLCQI 216
              PN+VT+  L+NGL  +G T +A+K+ +EM          I PN   Y  +I  LC+ 
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              D+   LFL+MK  G SPD VAY+++++G C   R + A  L      +G  P + ++
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID L +A + +EA    + M +    PD   Y  +I G    G++ DA  L   M  
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +GI  D   YN LI G+C  G + +A+ L  E+  ++ +P   T+  L+ G+ R G V D
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  LF +M+     P    +N L+DGLCK   L +A  LF+ +E                
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE---------------- 475

Query: 457 RVHD-KASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             HD + S+Q    +++  C A  I  A ++  +L+  G  P++ITY  +I+G CK G +
Sbjct: 476 -NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQL 534

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  LF  ++ KG  P+ VT+ TL+ G  + D  +    +  +M +   +P  +    +
Sbjct: 535 ENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIV 594

Query: 573 MTWSCRRRKF 582
           +    +  K+
Sbjct: 595 VDLLSKDEKY 604



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 263/572 (45%), Gaps = 31/572 (5%)

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           A  R +L +F  ++     + +   F ++   +D   +  +S     F  L+    K+  
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISS----FNTLLGAVAKIKR 107

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
               +  + +M      PD    N ++N           LAV  EM++    PN VTF+ 
Sbjct: 108 YFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTS 167

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+ GL    +   A  +L +M + G  PN  TY  +++GLC       A +L  +M +  
Sbjct: 168 LVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGN 227

Query: 234 ------CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
                   P+ V Y  +++  CK   +D+   L    +  G  P + +YS +I G+    
Sbjct: 228 GGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTG 287

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R++ A   + +M +E + P+VV + V+I  L +AGK+++A  LL  M +RG  PDT+ YN
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI GFC  G +D AR L V +  +    +  ++ +LI G C++G + +A+KL+ +M   
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD----KAS 463
              P+V  +N L+ GL + G++  A  LF +M                 +VHD      +
Sbjct: 408 EIMPTVITYNTLLTGLFREGKVRDAWNLFGEM-----------------KVHDLTPESCT 450

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +++  C    + +A ++   L      P I  +N LI+G CK   I  A +LF  L 
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            +GL P+ +TY  +I+GL +  + E+A  +F  M + GC P+   + +LM   C+  +  
Sbjct: 511 HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQ 570

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
               L  +        D  ++  + + L K E
Sbjct: 571 KVVELLQEMAEKDFSPDASTISIVVDLLSKDE 602



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 263/554 (47%), Gaps = 31/554 (5%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFF--IWAAKRKRLRSFASNSAVISMLLKP--- 76
           ++P  P  S  T+   + K K      R+F  I   KR  L   A +   +++L+     
Sbjct: 86  MQPTPPISSFNTLLGAVAKIK------RYFDVISLYKRMSLIGLAPDFITLNILINCYCN 139

Query: 77  -NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
            N  D     L E+     S  +  F  L+ G        +A     KM     +P+V  
Sbjct: 140 LNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVT 199

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLN------CLPNIVTFSLLINGLSKSGKTEVAIK 189
           Y  +LN        +LA+ ++ EM+  N        PN+V +  +I+ L K G  +   +
Sbjct: 200 YGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKE 259

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +  EM  RGI P+   Y+ +I G+C   R + A  LF +M D G  P+ V +N L++  C
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALC 319

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  +++EA  LL+   + G  P   +Y+ LIDG     R D+A   +  M  + IE D V
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV 379

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y V+I G  ++G++ +A KL  +M  + I+P    YN L+ G    G +  A +L  E+
Sbjct: 380 SYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
              D  P + T+ IL+ G+C+N  + +A +LF+ +E     PS+ +FN LIDGLCKA ++
Sbjct: 440 KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKI 499

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           E A              LF RLS  G    +  +   M+   C +G +  A  + + + E
Sbjct: 500 EIAR------------ELFNRLSHEGLEP-NVITYTVMIHGLCKSGQLENAKDLFLGMEE 546

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P+++T+N+L+ GFC+   +   ++L +E+  K   PD+ T   +++ L + ++  +
Sbjct: 547 KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606

Query: 550 AFRIFGQMPQNGCT 563
              +    P  G T
Sbjct: 607 YLHLLPTFPAQGQT 620


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 175/681 (25%), Positives = 308/681 (45%), Gaps = 85/681 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI    +VG+ ++ L  F +M+E   + +V++   ++ +  R+     AL++  EM
Sbjct: 63  AYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM 122

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  +IV +++ I+   K GK ++A K   EM   G++P+  TYT ++  LC+ NR 
Sbjct: 123 KSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRL 182

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  +F +M+ +   P   AYN ++ G+    + DEA +LL      G +P + +Y+C+
Sbjct: 183 DEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCI 242

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +  L +  + D+A   + +M  + + P++  Y ++I  L +AG V+ A K+   M+E G+
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL 301

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA-- 397
            P+    N +I   C    LD+A S+   +  +   P+  TF  LI G+ + G VDDA  
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYR 361

Query: 398 ---------------------------------QKLFNKMEKAGCFPSVGMFNALIDGLC 424
                                             K++ +M ++GC P + + N  +D + 
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVF 421

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KAGE EK   LF ++             +    + D  S   ++     AG   + Y++ 
Sbjct: 422 KAGETEKGRALFEEI-------------KARGFLPDTRSYSILIHSLVKAGFARETYELY 468

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             + + G + D   YN++I+GFCK G +N A +L +E++  G  P  VTYG++++GL ++
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
           DR ++A+ +F +   NG   +  +Y SL+    +                   GR DE+ 
Sbjct: 529 DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGK------------------VGRVDEAY 570

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             +EE +QKG   N                +  +   L GL +  ++ EAL  F  + + 
Sbjct: 571 LVMEEMMQKGLTPN----------------VYTWNCLLDGLVKAEEINEALVCFQSMKDL 614

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           K      +   LI+GLCK    + A   +    K G  L+P    Y       +K     
Sbjct: 615 KCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG--LKPNTITYTAMISGLAKSGNVA 672

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A  L  R ++ G   D+  Y
Sbjct: 673 QASSLFERFRASGGIPDSASY 693



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 261/526 (49%), Gaps = 14/526 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++ +L K N  D   +  +++        +  +  +I GY   G  ++A     + + 
Sbjct: 170 TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRA 229

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P V  YN +L    +K     AL ++ EM K + +PN+ T++++I  L K+G  E 
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEA 288

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+ D M + G+ PN  T  I+I  LC+  + DEA  +F  M    CSPD   + +L++
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLID 348

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  K  RVD+A  +         +P +  Y+ LI   F+  R ++ +  Y++M      P
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++L    +  + +AG+ +    L  +++ RG +PDT  Y+ LI      G   +   L 
Sbjct: 409 DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELY 468

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +  + +T  +  +I G C++G V+ A +L  +M+  G  P+V  + +++DGL K 
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             L++A +LF   E  K+  + L          ++    ++++ +   G + +AY ++ +
Sbjct: 529 DRLDEAYMLF---EEAKSNGIEL----------NQVIYSSLIDGFGKVGRVDEAYLVMEE 575

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G  P++ T+N L++G  K   IN AL  F+ ++     P+ +TY  LINGL +V +
Sbjct: 576 MMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRK 635

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
              AF  + +M + G  P+   Y ++++   +    + A SL+ ++
Sbjct: 636 FNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERF 681



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/684 (23%), Positives = 297/684 (43%), Gaps = 83/684 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I +  +    D     LDE++S        ++ V I  + KVG  + A + F +MK 
Sbjct: 100 TTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKA 159

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y +++ +  +      A+ ++ +M +   +P    ++ +I G   +GK + 
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDE 219

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------------ 228
           A  +L+    +G +P+   Y  +++ L +  + D+A R+F +                  
Sbjct: 220 AYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGM 279

Query: 229 ----------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
                           MK++G  P+    N +++  CK +++DEA ++    +     P 
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             ++  LIDGL +  R D+AY  Y +M +    P+VV+Y  +IR   +  + +D  K+  
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYK 399

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M   G  PD    N  +      G  ++ R+L  EI  R  LP+T +++ILI  + + G
Sbjct: 400 EMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAG 459

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
              +  +L+  M+  GC      +N +IDG CK+G++ KA  L  +M+ +G +PT+    
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTV---- 515

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  ++V+       + +AY +  +   +G   + + Y+SLI+GF KVG 
Sbjct: 516 ----------VTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A  + +E+  KGL P+  T+  L++GL + +   +A   F  M    CTP+   Y  
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+ RKF+ AF  W                  +E  ++G   N I           
Sbjct: 626 LINGLCKVRKFNKAFVFW------------------QEMQKQGLKPNTI----------- 656

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + GL + G V +A ++F        I    S   +I GL        A  
Sbjct: 657 -----TYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQ 711

Query: 692 VFLYTLKNGFILRPRVCNYLLRSL 715
           +F  T   G  +  + C  LL +L
Sbjct: 712 LFEETRLKGCSIHTKTCVALLDAL 735



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 254/571 (44%), Gaps = 28/571 (4%)

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L EM+  G  P  +T   +++   +  +  EA+ L   M+     P F AY  L+   
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            ++   D  LAL    ++ G+   +   + LI    R  R D A +   +M     + D+
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           VLY V I    + GKV  A K   +M+  G+VPD   Y +++   C    LD+A  +  +
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +   +P  + +  +I G    G  D+A  L  +    GC PSV  +N ++  L K G+
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            +KA  +F +M+    P L               +   ++   C AG +  A+K+   + 
Sbjct: 252 TDKALRIFEEMKRDAMPNL--------------PTYNIIIGMLCKAGNVEAAFKVRDAMK 297

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E+G  P++ T N +I+  CK   ++ A  +F+ +  K   PD  T+ +LI+GL +  R +
Sbjct: 298 EAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVD 357

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
           DA+RI+ +M      P+  VY SL+   + C R++      ++ + +R     D   + +
Sbjct: 358 DAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKED--GHKMYKEMMRSGCSPDLMLLNT 415

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            ++   + GE E   + L E + K   F      Y+I +  L + G  +E   ++  + +
Sbjct: 416 YMDCVFKAGETEKG-RALFE-EIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKD 473

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              ++   +   +I G CK G ++ A  +       G    P V  Y       +K ++ 
Sbjct: 474 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH--HPTVVTYGSVVDGLAKIDRL 531

Query: 724 VHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
             AY L    KS G +L+  +Y    SL+ G
Sbjct: 532 DEAYMLFEEAKSNGIELNQVIYS---SLIDG 559



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 22/473 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I    K G+ E A +    MKE    P+V   N +++   + Q    A +++  M
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGM 331

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+  TF  LI+GL K G+ + A ++ + M     +PN   YT +I    + +R 
Sbjct: 332 DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRK 391

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++ ++++ +M  SGCSPD +  N  ++   K    ++  AL    +  GF+P   SYS L
Sbjct: 392 EDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSIL 451

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L +A    E Y  Y  M ++    D   Y  +I G  ++GKV  A +LL +M+  G 
Sbjct: 452 IHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGH 511

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y +++ G   +  LD+A  L  E        N   ++ LI G  + G VD+A  
Sbjct: 512 HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYL 571

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK---NPTLFLRLSQGGN 456
           +  +M + G  P+V  +N L+DGL KA E+ +A + F  M+  K   N   +  L  G  
Sbjct: 572 VMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLC 631

Query: 457 RVH--DKA-----------------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +V   +KA                 +   M+     +G + +A  +  +   SG +PD  
Sbjct: 632 KVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSA 691

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           +YN++I G         A +LF+E +LKG    + T   L++ L + +  E A
Sbjct: 692 SYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 171/327 (52%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F ++K     PD   Y+ +++   +         +YY M    C+ + 
Sbjct: 421 FKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDT 480

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++ +I+G  KSGK   A ++L+EM   G  P   TY  V+ GL +I+R DEAY LF +
Sbjct: 481 RAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEE 540

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            K +G   + V Y++L++GF K+ RVDEA  ++    + G  P + +++CL+DGL +A+ 
Sbjct: 541 AKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEE 600

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +EA   ++ M + K  P+ + Y ++I GL +  K   A     +M+++G+ P+T  Y A
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTA 660

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G    G + QA SL         +P++ ++  +I G+       DA +LF +    G
Sbjct: 661 MISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKG 720

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLL 435
           C        AL+D L KA  LE+A ++
Sbjct: 721 CSIHTKTCVALLDALHKAECLEQAAIV 747



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 110/225 (48%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           +V+  L K +  D  +   +E +S  + +   ++  LI G+ KVG  ++A     +M + 
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P+VY +N +L+   + +    AL  +  M  L C PN +T+ +LINGL K  K   A
Sbjct: 580 GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKA 639

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
                EM ++G+ PN  TYT +ISGL +     +A  LF + + SG  PD  +YNA++ G
Sbjct: 640 FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
                R  +A  L       G      +   L+D L +A+  ++A
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 252/526 (47%), Gaps = 17/526 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   ++      L  + +M  F    + Y  N ++N          A +V  +++
Sbjct: 57  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+  TF+ LI GL   GK   A+++ D+MT  G  P+  TY  +I+GLC++    
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A R    M+   C P  V Y+ +++  CK R++ EAL+L       G  P   +YS LI
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL     + EA   +  M   KI PD + +  ++  L + G V  A  ++  M +  + 
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN+L+ G C    + +  ++   + ++  +P+  ++T LI G C+  ++D A  L
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
           F +M + G  P    +N LI GLC  G L  A  LF++M + G+ P              
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP-------------- 402

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKL 518
           D  + + + +  C    + +A  +L+++ E  NL PDI  Y+ +++G C+ G +  A  L
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAM-VLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F +L  KGL PD  TY  +INGL +     +A ++FG+M +NGC+P+   Y  +     R
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLR 521

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
             +   A  L+ + L      D  +   + E L    ++ +++ +L
Sbjct: 522 NNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/591 (27%), Positives = 273/591 (46%), Gaps = 84/591 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL+++  M+++   P+IV FS L+  +++       + +  +M   GI  N +T  I+I+
Sbjct: 38  ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C +NR   A+ +   +   G  P    +  L+ G C   ++ EAL L      +GF P
Sbjct: 98  SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y  LI+GL +      A  + R M +    P VV+Y  +I  L +  ++ +A+ L 
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLF 217

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM  +GI P+ + Y++LI G C LG   +A  L   +  R  +P+  TF  L+  +C+ 
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 277

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           GMV  A  + + M ++   P V  +N+L+DG C             + E+GK   +F   
Sbjct: 278 GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHC------------LRSEMGKTVNVF--- 322

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                         TMV + C                    +P +I+Y +LING+CK+  
Sbjct: 323 -------------DTMVRKGC--------------------VPSVISYTTLINGYCKIQI 349

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A+ LF+E+  +GL PD+VTY TLI+GL  V R  DA  +F +M   G  P    Y+ 
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L  + C+  + + A  L    L+ I G +                       L+ D  + 
Sbjct: 410 LFDYLCKNHRLAEAMVL----LKVIEGTN-----------------------LDPDIHI- 441

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 Y+I + G+C+ G+++ A ++FS L          +   +I+GLC++G L  A  
Sbjct: 442 ------YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +F    +NG    P  C Y L +  F ++N+ + A  L   M S G+ +D 
Sbjct: 496 LFGEMDENG--CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDV 544



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 203/421 (48%), Gaps = 48/421 (11%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  KVG+   A+     M++ +C+P V +Y+ +++   + +    AL+++ +M+   
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKG 224

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN  T+S LI+GL   G  + AI++   M  R I+P++ T+  ++  LC+     +A+
Sbjct: 225 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAH 284

Query: 224 -----------------------------------RLFLKMKDSGCSPDFVAYNALLNGF 248
                                               +F  M   GC P  ++Y  L+NG+
Sbjct: 285 YVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGY 344

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK++ +D+A+ L     + G +P   +Y+ LI GL    R  +A A + +M      PD+
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 404

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y ++   L +  ++ +AM LL  +    + PD + Y+ ++ G C  G L+ AR L  +
Sbjct: 405 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 464

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   P+  T+TI+I G+C+ G++ +A KLF +M++ GC P+   +N +  G  +  E
Sbjct: 465 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNE 524

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             +A  LF +M           LS+G +   D ++   +VE     GL     +IL +  
Sbjct: 525 TLRAIQLFQEM-----------LSRGFSI--DVSTTTLLVEMLSDDGLDQSVKQILCEFV 571

Query: 489 E 489
           +
Sbjct: 572 Q 572



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 201/426 (47%), Gaps = 10/426 (2%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           + E L + D +T      +P    L+  T+ + + K  N     RF     +R    +  
Sbjct: 140 IGEALQLFDKMTG--EGFQP--DVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVV 195

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
             S +I  L K            ++ +  +S  +  +  LI G   +G  ++A+  F  M
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL---SKS 181
                 PD   +N +++   ++ + + A  V   M++ +  P++VT++ L++G    S+ 
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GKT   + + D M ++G +P+  +YT +I+G C+I   D+A  LF +M   G  PD V Y
Sbjct: 316 GKT---VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTY 372

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L++G C + R+ +A+AL       G +P L +Y  L D L +  R  EA    + +  
Sbjct: 373 NTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEG 432

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             ++PD+ +Y +++ G+  AG+++ A  L S +  +G+ PD   Y  +I G C  GLL +
Sbjct: 433 TNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAE 492

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ +    PN  T+ ++  G  RN     A +LF +M   G    V     L++
Sbjct: 493 ASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVE 552

Query: 422 GLCKAG 427
            L   G
Sbjct: 553 MLSDDG 558



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 55/361 (15%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +DDA  LFN+M +    PS+  F+ L+  + +         L+ +M+    P        
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIP-------- 86

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                H+  +L  ++  +C    +  A+ +L  + + G  P   T+ +LI G C  G I 
Sbjct: 87  -----HNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG 141

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL+LF ++  +G +PD +TYGTLINGL +V     A R    M Q  C P+  VY +++
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 574 TWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKS---------- 606
              C+ R+ + A SL+   L                   I G   E+++           
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 607 ---------IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                    ++   ++G V  A   +  +++ D K +   +  Y   + G C   ++ + 
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPD---VVTYNSLMDGHCLRSEMGKT 318

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           +N+F  +V    + +  S   LI+G CK   +D AM +F    + G I      N L+  
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378

Query: 715 L 715
           L
Sbjct: 379 L 379



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 173/433 (39%), Gaps = 36/433 (8%)

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + DA+ L + M      P    ++ L+     +       SL  ++       NT+T  I
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI   C    +  A  +   + K G  PS   F  LI GLC  G++ +A  LF KM    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM---- 150

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                     G     D  +  T++   C  G    A + L  + +    P ++ Y+++I
Sbjct: 151 ---------TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  CK   +  AL LF ++  KG+ P++ TY +LI+GL  +   ++A R+F  M      
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE-EFLQKGEVENAIQG 622
           P    + +L+   C+         +   Y+ D+  + D     +    L  G    +   
Sbjct: 262 PDQLTFNTLVDALCKE-----GMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRS--- 313

Query: 623 LLEMDFKLNDF----------QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
             EM   +N F           +  YT  + G C+   + +A+ +F  + +   I    +
Sbjct: 314 --EMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              LIHGLC  G L  A+ +F   +  G I  P +  Y +      K+++   A  LL  
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQI--PDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 733 MKSVGYDLDACLY 745
           ++    D D  +Y
Sbjct: 430 IEGTNLDPDIHIY 442


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 303/618 (49%), Gaps = 31/618 (5%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLING 177
           F +M E    PDV+ YNA++     ++    AL +   M      NC PN+V++S +I+G
Sbjct: 153 FRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDG 212

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             K G+ + A  + DEM  +G  P+  TY+ +I GLC+    ++A  +   M D G  P+
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              YN ++ G+C L +++EA+ LL+     G  P + +Y  LI    +  R  EA + + 
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M  +  +P+  +Y +++ G +  G + D   LL  M   GI  +   +N LI  +   G
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +D+A +   E+ +    P+  +++ +I  +C+ G V+DA   FN+M   G  P++  F 
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGL 476
           +LI GLC  GE +K   L ++M           +++G   +H D   + T+++  C  G 
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEM-----------INRG---IHPDAIFMNTIMDNLCKEGR 498

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A      +   G  P++++YN+LI+G+C VG ++ ++K F  +   GLRPDS TY  
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L+NG  +  R EDA  ++ +M +            ++    +  +   A  L+++ +   
Sbjct: 559 LLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMV--- 615

Query: 597 SGRDDESMKSIEEF--LQKGEVENA-IQGLLEM--DFKLNDFQLAPYTIWLI--GLCQDG 649
              D  +   IE +  +  G  EN+ +   L M  D +  +F+L  +T  ++   L + G
Sbjct: 616 ---DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVG 672

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++ EA ++FS +V    +    +   +I    + G L+ + D+FL   KNG      + N
Sbjct: 673 RIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLN 732

Query: 710 YLLRSLLFSKDNKKVHAY 727
            ++R LL   D ++   Y
Sbjct: 733 VIIRRLLEKGDVRRAGTY 750



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/630 (26%), Positives = 283/630 (44%), Gaps = 70/630 (11%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKE---FDCQP 131
           +  D+ ++ + EL         DVF    LI G       ++ALE    M     ++C P
Sbjct: 147 DAMDMVFRRMPEL-----GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +V  Y+ +++  F++     A  ++ EM+     P++VT+S LI+GL K+     A  +L
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL 261

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             M  +G++PN  TY I+I G C + + +EA RL  KM  SG  PD V Y  L+  +CK+
Sbjct: 262 QHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKI 321

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGL----------------------FRAKRY 289
            R  EA ++  S  + G  P    Y  L+ G                       F  + +
Sbjct: 322 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 381

Query: 290 -------------DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
                        D+A   + +M +  + PDVV Y  +I  L + G+V+DA+   + M  
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P+   + +LI G C +G   +   L  E+  R   P+      ++  +C+ G V +
Sbjct: 442 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 501

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT--LFLRLSQ 453
           AQ  F+ +   G  P+V  +N LIDG C  G+++++   F +M  IG  P    +  L  
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561

Query: 454 G---GNRVHDKASL-QTMVE---QYCT------------AGLIHKAYKILMQLAESGNLP 494
           G     RV D  +L + M     ++C             AG I  A ++ M++ + G   
Sbjct: 562 GYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQL 621

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            I TYN+++ G C+   ++ AL++F++L+ K    D  T+  +IN L +V R ++A  +F
Sbjct: 622 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLF 681

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
             M   G  P    Y  ++           +  L+L   ++    D   +   I   L+K
Sbjct: 682 SAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEK 741

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           G+V  A   L ++D K  +F +   T  L+
Sbjct: 742 GDVRRAGTYLTKIDEK--NFSVEASTAALL 769



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 168/641 (26%), Positives = 286/641 (44%), Gaps = 41/641 (6%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFR-------KQLFLLALAVYYEMVK--LNCL 165
           E AL  F ++        V+ +N+VL +  R       +    LA++++  M +  +N +
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 166 P-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
             N     +LI      G+ ++A        + G      T   +I GLC   R D+A  
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 225 L-FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV---PRLGSYSCLI 280
           + F +M + G +PD  +YNAL+ G C  ++  EAL LL     DG     P + SYS +I
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG F+    D+AY  + +M  +   PDVV Y  +I GL +A  +  A  +L  M ++G++
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+T  YN +I+G+C LG L++A  L  ++      P+  T+ +LI   C+ G   +A+ +
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M + G  P+  +++ L+ G    G L     L   M                     
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              + K  T F  + Q G R  D  S  T++   C  G +  A     Q+   G  P+II
Sbjct: 391 HGAVDKAMTAFTEMRQNGLR-PDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           ++ SLI+G C +G      +L  E+  +G+ PD++   T+++ L +  R  +A   F  +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGE 615
              G  P+   Y +L+   C   K   +   +   +  I  R D    +  +  + + G 
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQF-DRMVSIGLRPDSWTYNALLNGYFKNGR 568

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           VE+A+    EM  K   F      I L GL Q G++  A  ++  +V+    +   +   
Sbjct: 569 VEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 628

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           ++ GLC+   +D A+ +F       F L     N ++ +LL
Sbjct: 629 VLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALL 669



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 221/497 (44%), Gaps = 13/497 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L K    +     L  +    V   +  + ++I GY  +G  E+A+    KM  
Sbjct: 242 SSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPDV  Y  ++    +      A +V+  MV+    PN   + +L++G +  G    
Sbjct: 302 SGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 361

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +LD M + GI      + I+I    +    D+A   F +M+ +G  PD V+Y+ +++
Sbjct: 362 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIH 421

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK+ RV++A+        +G  P + S++ LI GL     + +      +M    I P
Sbjct: 422 ILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D +    ++  L + G+V +A      +   G+ P+   YN LI G+C +G +D++    
Sbjct: 482 DAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQF 541

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P++ T+  L+ G  +NG V+DA  L+ +M +          N ++ GL +A
Sbjct: 542 DRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQA 601

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G +  A  L+ KM + +   L +             +  T++   C    + +A ++   
Sbjct: 602 GRIVAARELYMKM-VDRGTQLRIE------------TYNTVLGGLCENSCVDEALRMFED 648

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L       D+ T+N +IN   KVG I+ A  LF  + L+G  P  +TY  +I        
Sbjct: 649 LRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGL 708

Query: 547 EEDAFRIFGQMPQNGCT 563
            E++  +F  M +NGC 
Sbjct: 709 LEESDDLFLSMEKNGCA 725



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 151/356 (42%), Gaps = 35/356 (9%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI +L K    +      +++ S  +S     F  LI G   +G+ +K  E   +M
Sbjct: 415 SYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEM 474

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 PD    N +++   ++   + A   +  ++ +   PN+V+++ LI+G    GK 
Sbjct: 475 INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKM 534

Query: 185 EVAIKMLDEMTQRGILPNKFTYT-----------------------------------IV 209
           + +IK  D M   G+ P+ +TY                                    I+
Sbjct: 535 DESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNII 594

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           + GL Q  R   A  L++KM D G       YN +L G C+   VDEAL +        F
Sbjct: 595 LHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEF 654

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              + +++ +I+ L +  R DEA + +  M      P V+ Y +MI+   E G ++++  
Sbjct: 655 ELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDD 714

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           L   M + G   D++  N +I+   + G + +A +   +I +++      T  +LI
Sbjct: 715 LFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 140/438 (31%), Positives = 231/438 (52%), Gaps = 13/438 (2%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y  +L    R      +L +++ MV+   LP+I  FS L++ +SK  K +V I + ++M 
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             GI  N  T  I+++  C+ ++   A     KM   G  PD V + +LLNGFC+  R+ 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +AL +     + G+ P +  Y+ +IDGL ++K+ D A     +M  + I PD V Y  +I
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL  +G+  DA +++S M +R I PD + +NALI      G + +A  L  E+ +R   
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+++LI G+C    +D+A+++F  M   GCFP V  ++ LI+G CK+ ++E    L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F +M            SQ G  V +  +   +++ YC AG ++ A +I   +   G  P+
Sbjct: 349 FCEM------------SQRG-VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPN 395

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           IITYN L++G C  G I  AL +  ++Q  G+  D VTY  +I G+ +     DA+ ++ 
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYC 455

Query: 556 QMPQNGCTPSPAVYKSLM 573
            +   G TP    Y ++M
Sbjct: 456 SLNLKGLTPDIWTYTAMM 473



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 226/486 (46%), Gaps = 71/486 (14%)

Query: 99  DVFFVLISG--YYKVGDCEKALESFGKMKEFDCQPDVYIY-----------------NAV 139
           D+FF ++       + D  + L +  KMK++D    V IY                 N +
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYD----VVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           LN   R     LAL+   +M+KL   P+IVTF  L+NG  +  +   A+ M D M + G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            PN   Y  +I GLC+  + D A  L  +M+  G  PD V YN+L++G C   R D+A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           ++    K    P + +++ LID   +  R  EA   Y +M    ++PD+V Y ++I GL 
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
              ++ +A ++   M  +G  PD   Y+ LI G+C    ++    L  E+ +R  + NT 
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+T+LI G CR G ++ A+++F  M   G  P++  +N L+ GLC  G++EKA ++   M
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +                                                +SG   DI+TY
Sbjct: 423 Q------------------------------------------------KSGMDADIVTY 434

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +I G CK G +  A  L+  L LKGL PD  TY  ++ GL +     +A  +F +M +
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494

Query: 560 NGCTPS 565
           +G  P+
Sbjct: 495 DGILPN 500



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 192/444 (43%), Gaps = 47/444 (10%)

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + D++  LF  M      P    ++ LL+   K+++ D  + L    +  G    L + +
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L++   R  +   A ++  KM +   EPD+V +G ++ G     ++ DA+ +   M E 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P+   YN +I G C    +D A  L   +      P+  T+  LI G+C +G  DDA
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            ++ + M K   +P V  FNALID   K G + +A  L+ +M         +R S     
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM---------IRRSLD--- 288

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   ++   C    + +A ++   +   G  PD++TY+ LING+CK   +   +K
Sbjct: 289 -PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF E+  +G+  ++VTY  LI G  R  +   A  IF  M   G  P+   Y  L+   C
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLC 407

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
                                               G++E A+  L +M     D  +  
Sbjct: 408 ----------------------------------DNGKIEKALVILADMQKSGMDADIVT 433

Query: 638 YTIWLIGLCQDGQVKEALNIFSVL 661
           Y I + G+C+ G+V +A +++  L
Sbjct: 434 YNIIIRGMCKAGEVADAWDLYCSL 457



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 205/466 (43%), Gaps = 57/466 (12%)

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R  + D++   +  M + +  P +  +  ++  +S+  K    + L   M+  GI  + 
Sbjct: 57  IRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
              N L+  FC    L  A S   ++ K    P+  TF  L+ G CR   + DA  +F++
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDR 176

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKA 462
           M + G  P+V ++N +IDGLCK+ +++ A  L  +ME+ G  P              D  
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRP--------------DAV 222

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  +++   C +G    A +++  + +    PD+ T+N+LI+   K G I+ A +L++E+
Sbjct: 223 TYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             + L PD VTY  LI GL    R ++A ++FG M   GC P    Y  L+   C+ +K 
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                             +  MK   E  Q+G V N +                 YT+ +
Sbjct: 343 ------------------EHGMKLFCEMSQRGVVRNTVT----------------YTVLI 368

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKN 699
            G C+ G++  A  IF  +V C     PP+ +    L+HGLC  G ++ A+ +     K+
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCG---VPPNIITYNVLLHGLCDNGKIEKALVILADMQKS 425

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           G        N ++R +   K  +   A+ L C +   G   D   Y
Sbjct: 426 GMDADIVTYNIIIRGM--CKAGEVADAWDLYCSLNLKGLTPDIWTY 469



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 157/311 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D     L+ +    +   +  +  LISG    G  + A      M +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK 249

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  PDV+ +NA+++   ++     A  +Y EM++ +  P+IVT+SLLI GL    + + 
Sbjct: 250 REIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M   M  +G  P+  TY+I+I+G C+  + +   +LF +M   G   + V Y  L+ 
Sbjct: 310 AEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQ 369

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C+  +++ A  + +     G  P + +Y+ L+ GL    + ++A      M +  ++ 
Sbjct: 370 GYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDA 429

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y ++IRG+ +AG+V DA  L   +  +G+ PD + Y A++ G    GL  +A +L 
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALF 489

Query: 367 VEIWKRDSLPN 377
            ++ +   LPN
Sbjct: 490 RKMKEDGILPN 500



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 70/164 (42%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G + F   ++R  +R+  + + +I    +    ++  +    +    V     
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+ G    G  EKAL     M++     D+  YN ++    +      A  +Y  +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                 P+I T++ ++ GL K G    A  +  +M + GILPN+
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 220/448 (49%), Gaps = 13/448 (2%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F   PDVY    V+N          A +   +++KL   P+  TF+ LI GL   G
Sbjct: 95  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+ + D+M   G  PN  TY  +I+GLC++     A RL   M+   C P+ V ++
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++  CK R+V EA  +       G  P + +Y+ LI GL +   +        +M + 
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS 274

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           KI PDV     ++  L + G V +A  ++  M  RG+ P+   YNAL+ G C    +D A
Sbjct: 275 KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVA 334

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +  +D + N  ++  LI G C+   VD A  LF +M +    P+   +N LI G
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  G L+ A  LF++M           +++G  ++ D  + +T+ +  C    + KA  
Sbjct: 395 LCHVGRLQDAISLFHEM-----------VARG--QIPDLVTYRTLSDYLCKNRHLDKAMA 441

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  S   PDI  Y ++++G C+ G +  A  LF  L  KGL+P+  TY  +I+GL 
Sbjct: 442 LLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +     +A ++F +M +NGC+P+   Y 
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYN 529



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 22/542 (4%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  DEA   F +M      P  V +N LL    K +     L+L R  +  G  P + 
Sbjct: 47  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I+ L    R D A++   K+ +   +PD   +  +IRGL   GK+ +A+ L   M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  P+   Y  LI G C +G    A  L   + + +  PN   F+ LI  +C++  V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQ 453
            +A  +F++M   G  P++  +N+LI GLCK  E +    L  +M   K  P +F     
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF----- 281

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +L T+V+  C  G++ +A+ ++  +   G  P+++TYN+L++G C    ++
Sbjct: 282 ---------TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+K+F  +  K    + ++Y TLING  ++   + A  +F +M +   TP+   Y +L+
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-D 632
              C   +   A SL+ + +      D  + +++ ++L K    +    LL+     N D
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  YT  L G+C+ G++++A ++FS L          +   +IHGLCK+G L  A  +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           F    KNG    P  C Y L +  F ++N+ +    LL  M + G+ +D      T +LL
Sbjct: 513 FSEMNKNG--CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV----STTTLL 566

Query: 753 PG 754
            G
Sbjct: 567 VG 568



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 218/476 (45%), Gaps = 16/476 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+ L   N  D  +  L ++        +  F  LI G    G   +AL  F KM  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP+V  Y  ++N   +      A+ +   M + NC PN+V FS LI+ L K  +   
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  EM  +GI PN  TY  +I GLC++        L  +M DS   PD    N +++
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V EA  ++      G  P + +Y+ L+DG       D A   +  M  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +V+ Y  +I G  +   V  AM L  +M  + + P+T  YN LI G C +G L  A SL 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  R  +P+  T+  L   +C+N  +D A  L   +E +   P + ++  ++DG+C+A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           GELE A  LF  +   G  P ++              +   M+   C  GL+ +A K+  
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVW--------------TYNIMIHGLCKQGLLAEASKLFS 514

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++ ++G  P+  TYN +  GF +       ++L +E+  +G   D V+  TL+ G+
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGM 569



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 173/361 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K       +    E+ +  +S     +  LI G  K+ + +       +M +
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+  N V++   ++ +   A  V   M+     PN+VT++ L++G     + +V
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ D M  +  + N  +Y  +I+G C+I   D+A  LF +M     +P+ V YN L++
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C + R+ +A++L       G +P L +Y  L D L + +  D+A A  + +     +P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+ +Y  ++ G+  AG+++DA  L S++  +G+ P+ + YN +I G C  GLL +A  L 
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 513

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ K    PN  T+ ++  G  RN       +L  +M   G    V     L+  L   
Sbjct: 514 SEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573

Query: 427 G 427
           G
Sbjct: 574 G 574



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+    + + A++ F  M   DC  +V  YN ++N   + Q    A+ ++ EM
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    PN VT++ LI+GL   G+ + AI +  EM  RG +P+  TY  +   LC+    
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL 436

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L   ++ S   PD   Y  +L+G C+   +++A  L  +    G  P + +Y+ +
Sbjct: 437 DKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 496

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL +     EA   + +M +    P+   Y ++ RG     +    ++LL +M  RG 
Sbjct: 497 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 556

Query: 340 VPDTYCYNALIKGFCDLGLLDQA 362
             D      L+    D G LDQ+
Sbjct: 557 SVDVSTTTLLVGMLSDDG-LDQS 578



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           V  + F     +  + +  S + +I+   K    D      +E+    ++  +  +  LI
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
            G   VG  + A+  F +M      PD+  Y  + +   + +    A+A+   +   N  
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  ++ +++G+ ++G+ E A  +   ++ +G+ PN +TY I+I GLC+     EA +L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M  +GCSP+   YN +  GF +       + LL      GF   + + + L+ G+  
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLS 571

Query: 286 AKRYDEA 292
               D++
Sbjct: 572 DDGLDQS 578


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 226/470 (48%), Gaps = 13/470 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K       L    +M  F   PDVY    V+N          A +   +++
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+  TF+ LI GL   GK   A+ + D+M   G  PN  TY  +I+GLC++    
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A RL   M+   C P+ V ++ L++  CK R+V EA  +       G  P + +Y+ LI
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL +   +        +M + KI PDV     ++  L + G V +A  ++  M  RG+ 
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YNAL+ G C    +D A  +   +  +D + N  ++  LI G C+   VD A  L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M +    P+   +N LI GLC  G L+ A  LF++M           +++G  ++ D
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM-----------VARG--QIPD 419

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             + +T+ +  C    + KA  +L  +  S   PDI  Y ++++G C+ G +  A  LF 
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            L  KGL+P+  TY  +I+GL +     +A ++F +M +NGC+P+   Y 
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 529



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 22/542 (4%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  DEA   F +M      P  V +N LL    K +     L+L R  +  G  P + 
Sbjct: 47  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 106

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I+ L    R D A++   K+ +   +PD   +  +IRGL   GK+ +A+ L   M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  P+   Y  LI G C +G    A  L   + + +  PN   F+ LI  +C++  V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQ 453
            +A  +F++M   G  P++  +N+LI GLCK  E +    L  +M   K  P +F     
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF----- 281

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +L T+V+  C  G++ +A+ ++  +   G  P+++TYN+L++G C    ++
Sbjct: 282 ---------TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+K+F  +  K    + ++Y TLING  ++   + A  +F +M +   TP+   Y +L+
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-D 632
              C   +   A SL+ + +      D  + +++ ++L K    +    LL+     N D
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  YT  L G+C+ G++++A ++FS L          +   +IHGLCK+G L  A  +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           F    KNG    P  C Y L +  F ++N+ +    LL  M + G+ +D      T +LL
Sbjct: 513 FSEMNKNG--CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV----STTTLL 566

Query: 753 PG 754
            G
Sbjct: 567 VG 568



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 218/476 (45%), Gaps = 16/476 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+ L   N  D  +  L ++        +  F  LI G    G   +AL  F KM  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP+V  Y  ++N   +      A+ +   M + NC PN+V FS LI+ L K  +   
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  EM  +GI PN  TY  +I GLC++        L  +M DS   PD    N +++
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V EA  ++      G  P + +Y+ L+DG       D A   +  M  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +V+ Y  +I G  +   V  AM L  +M  + + P+T  YN LI G C +G L  A SL 
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  R  +P+  T+  L   +C+N  +D A  L   +E +   P + ++  ++DG+C+A
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           GELE A  LF  +   G  P ++              +   M+   C  GL+ +A K+  
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVW--------------TYNIMIHGLCKQGLLAEASKLFS 514

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++ ++G  P+  TYN +  GF +       ++L +E+  +G   D V+  TL+ G+
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLVGM 569



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 173/361 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K       +    E+ +  +S     +  LI G  K+ + +       +M +
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+  N V++   ++ +   A  V   M+     PN+VT++ L++G     + +V
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ D M  +  + N  +Y  +I+G C+I   D+A  LF +M     +P+ V YN L++
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C + R+ +A++L       G +P L +Y  L D L + +  D+A A  + +     +P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+ +Y  ++ G+  AG+++DA  L S++  +G+ P+ + YN +I G C  GLL +A  L 
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 513

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ K    PN  T+ ++  G  RN       +L  +M   G    V     L+  L   
Sbjct: 514 SEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573

Query: 427 G 427
           G
Sbjct: 574 G 574



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           V  + F     +  + +  S + +I+   K    D      +E+    ++  +  +  LI
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
            G   VG  + A+  F +M      PD+  Y  + +   + +    A+A+   +   N  
Sbjct: 393 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 452

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  ++ +++G+ ++G+ E A  +   ++ +G+ PN +TY I+I GLC+     EA +L
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M  +GCSP+   YN +  GF +       + LL      GF   + + + L+ G+  
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLS 571

Query: 286 AKRYDEA 292
               D++
Sbjct: 572 DDGLDQS 578


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 246/524 (46%), Gaps = 15/524 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K+      L    +M  F   PDVY  N ++N     +    A +V  +++
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL C P+  TF+ LI GL   GK   A+ + D+    G  P+  TY  +++GLC++    
Sbjct: 213 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 272

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A RL   M    C P+ +AYN +++  CK R+V EA  L       G  P + +Y+ LI
Sbjct: 273 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 332

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L     +        +M   KI P+VV++  ++  L + G +  A  ++  M +RG+ 
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y AL+ G C    +D+A  +   +  +  +PN  ++ ILI G C+   +D A  L
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             +M   G       +N LI GLC  G L+ A  LF++M                 ++ D
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM-------------VASGQIPD 499

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLF 519
             + + +++  C    + +A  +L++  E  NL  DI+ YN  I+G C+ G +  A  LF
Sbjct: 500 LVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 558

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             L  KGL+PD  TY  +I+GL +    ++A ++F +M +NGC+    +Y +++    R 
Sbjct: 559 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRS 618

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
            +   A  L  + L +    D  +   I E L    ++ + + L
Sbjct: 619 NETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 268/592 (45%), Gaps = 86/592 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL+ +  M+ ++  P+ V F+ L+  ++K       + +  +M   GI P+ +T  I+I+
Sbjct: 134 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 193

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C + R   A+ +  K+   GC PD   +N L+ G C   ++ EAL L      +GF P
Sbjct: 194 SFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQP 253

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y  L++GL +      A    R M ++   P+V+ Y  +I  L +  +V +A  L 
Sbjct: 254 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLF 313

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M  +GI PD + YN+LI   C+L             WK       H  T+L       
Sbjct: 314 SEMITKGISPDIFTYNSLIHALCNLCE-----------WK-------HVTTLL------- 348

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
                     N+M  +   P+V +F+ ++D LCK G +  A+ +   M + G  P     
Sbjct: 349 ----------NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP----- 393

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   +++ +C    + +A K+   +   G +P++ +YN LING+C++ 
Sbjct: 394 ---------DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 444

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A+ L +++ L+GL  D+VTY TLI+GL  V R + A  +F +M  +G  P    Y+
Sbjct: 445 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 504

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+ + C+    + A  L    L+ I G +                              
Sbjct: 505 ILLDYLCKNHHLAEAMVL----LKAIEGSN------------------------------ 530

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            D  +  Y I + G+C+ G+++ A ++FS L          +   +IHGLCKRG LD A 
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +F    +NG      + N ++R   F + N+   A  LL  M + G+  D 
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRG--FLRSNETFGATQLLQEMLAEGFSADV 640



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 181/407 (44%), Gaps = 35/407 (8%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+ + + K  N     R      ++    +  + + +I  L K       +    E+ + 
Sbjct: 260 TLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK 319

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            +S     +  LI     + + +       +M      P+V +++ V++   ++ +  +A
Sbjct: 320 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 379

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             V   M+K    P++VT++ L++G     + + A+K+ D M  +G +PN  +Y I+I+G
Sbjct: 380 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 439

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQI R D+A  L  +M   G   D V YN L++G C + R+  A+AL       G +P 
Sbjct: 440 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 499

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L +Y  L+D L +     EA    + +    ++ D+++Y + I G+  AG+++ A  L S
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 559

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           ++  +G+ PD   YN +I G C  GLLD+                               
Sbjct: 560 NLSSKGLQPDVRTYNIMIHGLCKRGLLDE------------------------------- 588

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
               A KLF KM++ GC     ++N +I G  ++ E   A  L  +M
Sbjct: 589 ----ANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEM 631



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 1/296 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S V+  L K     +    +D +    V      +  L+ G+    + ++A++ F  M  
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+V  YN ++N   + Q    A+ +  +M     + + VT++ LI+GL   G+ + 
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  EM   G +P+  TY I++  LC+ +   EA  L   ++ S    D + YN  ++
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 543

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+   ++ A  L  +    G  P + +Y+ +I GL +    DEA   +RKM E     
Sbjct: 544 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSR 603

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           D  +Y  +IRG   + +   A +LL +M   G   D      +++   D G LDQ+
Sbjct: 604 DGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQS 658


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 185/691 (26%), Positives = 306/691 (44%), Gaps = 93/691 (13%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLK-----PNGFDLYWQTLDEL 89
           S   + + P +  +      +R+ +R S  + +AV+S L +     P      +++L EL
Sbjct: 143 SAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIEL 202

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R   +      F +L+  +   G    AL +   M+ F   PD   YN +LN   RK + 
Sbjct: 203 R---LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGML 259

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A A+   M +    P   T++ L++  ++ G  + A K+++ MT  G  P+  TY ++
Sbjct: 260 GEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319

Query: 210 ISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
             GLCQ  + DEA+RL  +M+  S   PD V YN L++   K R   +AL LL      G
Sbjct: 320 AVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P L +++ ++  L +  + +EA     K+ EE + PDV+ Y  +I    +AG V  A 
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL----------------------- 365
            L+ +M  +G+  DT+  N ++   C +   + A  L                       
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499

Query: 366 --------QVEIW----KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                    + +W    +R  +P+  T+  LI G+CR   + +A    N++ + G  P  
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDE 559

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N +I   CK G+LE A     KM E    P              D  +  T++   C
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP--------------DVVTCNTLMNGLC 605

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + KA K+     E G   D+ITYN+LI   CKVG+++ AL  F ++++KGL+PD+ 
Sbjct: 606 LHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAF 665

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  +++ L    R E+A  +  ++  +G                   K S +F+  L  
Sbjct: 666 TYNVVLSALSEAGRSEEAHNMLHKLADSG-------------------KLSQSFACPL-- 704

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           L+  S   DE+   ++E   K E E++         K  D  L  Y   L GLC  GQ+K
Sbjct: 705 LKPSSA--DEA--DVKEHEGKPEAESS--------EKAQDNALETYMERLNGLCTGGQLK 752

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           EA  +   +++    V   + + L+ GL KR
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLMEGLIKR 783



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 226/489 (46%), Gaps = 25/489 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + VL  G  + G  ++A     +M+      PDV  YN +++  F+ +    AL +  E
Sbjct: 315 TYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      P +VT ++++  L K GK E A+  L+++ + G+ P+  TY  +I   C+   
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A+ L  +M   G   D    N +L   CK++R ++A  LL S  + GFVP   SY  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++   F+    + A   + +M E K+ P +  Y  +I+GL    ++K+A+  L+++ E+G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +VPD   YN +I  +C  G L+ A     ++ +    P+  T   L+ G+C +G +D A 
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           KLF    + G    V  +N LI  +CK G+++ A   F  ME+ G  P  F         
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAF--------- 665

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD-----IITYNSLINGFCKVGNI 512
                +   ++     AG   +A+ +L +LA+SG L       ++  +S      K    
Sbjct: 666 -----TYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
               +  ++ Q   L     TY   +NGL    + ++A  +  +M Q G     + Y +L
Sbjct: 721 KPEAESSEKAQDNALE----TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITL 776

Query: 573 MTWSCRRRK 581
           M    +R+K
Sbjct: 777 MEGLIKRQK 785



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 250/563 (44%), Gaps = 55/563 (9%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRY--DEAYAWYRK 298
           +A L+ + +LR    A  LL S  +  G  P L + + ++  L R+       +   +R 
Sbjct: 139 DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRS 198

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           + E ++ P+   + +++      G + DA+  LS M+  G+ PD   YN L+   C  G+
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258

Query: 359 LDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           L +AR+L   + KRD + P   T+  L+    R G +  A K+   M   G  P +  +N
Sbjct: 259 LGEARALLARM-KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317

Query: 418 ALIDGLCKAGELEKANLLFYKME--------IGKNPTLF------------LRLSQGGNR 457
            L  GLC+AG++++A  L  +ME        +    TL             LRL +    
Sbjct: 318 VLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 458 VHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              K +L T   +V+  C  G + +A   L ++AE G  PD+ITYN+LI+ +CK GN+  
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  L  E+  KGL+ D+ T  T++  L ++ R EDA  +    PQ G  P    Y ++M 
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF------ 628
              +      A  LW Q +      + + + SI  +         I+GL  M+       
Sbjct: 498 AYFKEYNPEPALRLWDQMI------ERKLIPSISTY------NTLIKGLCRMERLKEAID 545

Query: 629 KLNDF---QLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
           KLN+     L P    Y I +   C++G ++ A    + +VE        +C  L++GLC
Sbjct: 546 KLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLC 605

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
             G LD A+ +F   ++ G  +     N L++S+    D     A H    M+  G   D
Sbjct: 606 LHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDT--ALHFFDDMEVKGLQPD 663

Query: 742 ACLYPKTKSLLPGPWNTREMENM 764
           A  Y    S L     + E  NM
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNM 686



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 37/301 (12%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K  NP+   R +    +RK + S ++ + +I  L +          L+E
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNE 549

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L    +      + ++I  Y K GD E A     KM E   +PDV   N ++N       
Sbjct: 550 LVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL ++   V+     +++T++ LI  + K G  + A+   D+M  +G+ P+ FTY +
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 209 VISGLCQINRADEAYRLFLKMKDSG-------C-----------------------SPDF 238
           V+S L +  R++EA+ +  K+ DSG       C                       S + 
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEK 729

Query: 239 VAYNAL------LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF-RAKRYDE 291
              NAL      LNG C   ++ EA A+L    + G      +Y  L++GL  R KR   
Sbjct: 730 AQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQTH 789

Query: 292 A 292
           A
Sbjct: 790 A 790


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 226/439 (51%), Gaps = 16/439 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G++ + +  KA+     +++F  QPDV+ YNA++N   +      A  V   M   +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ VT++++I  L   GK ++A+K+L+++      P   TYTI+I         DEA 
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M   G  PD   YN ++ G CK   VD A  ++R+ E  G  P + SY+ L+  L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRAL 308

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +++E      KMF EK +P+VV Y ++I  L   GK+++AM LL  M+E+G+ PD 
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y+ LI  FC  G LD A      +     LP+   +  ++  +C+NG  D A ++F K
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           + + GC P+   +N +   L  +G+  +A +++   M  G +P              D+ 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP--------------DEI 474

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  +M+   C  G++ +A+++L+ +      P ++TYN ++ GFCK   I  A+ + + +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 523 QLKGLRPDSVTYGTLINGL 541
              G RP+  TY  LI G+
Sbjct: 535 VGNGCRPNETTYTVLIEGI 553



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 212/444 (47%), Gaps = 14/444 (3%)

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R   ++ +L +   MV+    P+++  + LI G         A+++++ + + G  P+ F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+G C++NR D+A R+  +M+    SPD V YN ++   C   ++D AL +L   
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
             D   P + +Y+ LI+        DEA     +M    ++PD+  Y  +IRG+ + G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A +++ ++  +G  PD   YN L++   + G  ++   L  +++     PN  T++IL
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I  +CR+G +++A  L   M++ G  P    ++ LI   C+ G L+ A      M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM----- 394

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                 +S G   + D  +  T++   C  G   +A +I  +L E G  P+  +YN++ +
Sbjct: 395 ------ISDGC--LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
                G+   AL +  E+   G+ PD +TY ++I+ L R    ++AF +   M      P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSL 588
           S   Y  ++   C+  +   A ++
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINV 530



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 227/483 (46%), Gaps = 21/483 (4%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+     E+  L   M   G +PD +    L+ GF  LR + +A+ ++   EK G  P +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI+G  +  R D+A     +M  +   PD V Y +MI  L   GK+  A+K+L+ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +      P    Y  LI+     G +D+A  L  E+  R   P+  T+  +I GMC+ GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLS 452
           VD A ++   +E  G  P V  +N L+  L   G+ E+   L  KM   K +P +     
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV----- 333

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   ++   C  G I +A  +L  + E G  PD  +Y+ LI  FC+ G +
Sbjct: 334 ---------VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A++  + +   G  PD V Y T++  L +  + + A  IFG++ + GC+P+ + Y ++
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444

Query: 573 MT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK 629
            +  WS   +    A  + L+ + +    D+ +  S I    ++G V+ A + L++M   
Sbjct: 445 FSALWSSGDK--IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  Y I L+G C+  ++++A+N+   +V         +   LI G+   GY   A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562

Query: 690 MDV 692
           M++
Sbjct: 563 MEL 565



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 186/375 (49%), Gaps = 4/375 (1%)

Query: 57  RKRLRSFASNSA----VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R R + F+ ++     +I  L      DL  + L++L S N       + +LI      G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             ++AL+   +M     +PD++ YN ++    ++ +   A  +   +      P++++++
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYN 302

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +L+  L   GK E   K++ +M      PN  TY+I+I+ LC+  + +EA  L   MK+ 
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD  +Y+ L+  FC+  R+D A+  L +   DG +P + +Y+ ++  L +  + D+A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + K+ E    P+   Y  M   L  +G    A+ ++ +M   GI PD   YN++I  
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G++D+A  L V++   +  P+  T+ I++ G C+   ++DA  +   M   GC P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542

Query: 413 VGMFNALIDGLCKAG 427
              +  LI+G+  AG
Sbjct: 543 ETTYTVLIEGIGFAG 557



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 5/372 (1%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I+   K N  D   + LD +RS + S  +  + ++I      G  + AL+   
Sbjct: 159 FAYN-ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++   +CQP V  Y  ++     +     AL +  EM+     P++ T++ +I G+ K G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             + A +M+  +  +G  P+  +Y I++  L    + +E  +L  KM    C P+ V Y+
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+   C+  +++EA+ LL+  ++ G  P   SY  LI    R  R D A  +   M  +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PD+V Y  ++  L + GK   A+++   + E G  P++  YN +       G  D+ 
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKI 455

Query: 363 RSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           R+L   +E+      P+  T+  +I  +CR GMVD+A +L   M      PSV  +N ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 421 DGLCKAGELEKA 432
            G CKA  +E A
Sbjct: 516 LGFCKAHRIEDA 527



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 157/338 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I   +   G D   + +DE+ S  +      +  +I G  K G  ++A E    ++ 
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  YN +L     +  +     +  +M    C PN+VT+S+LI  L + GK E 
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M ++G+ P+ ++Y  +I+  C+  R D A      M   GC PD V YN +L 
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  + D+AL +     + G  P   SY+ +   L+ +     A     +M    I+P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D + Y  MI  L   G V +A +LL DMR     P    YN ++ GFC    ++ A ++ 
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             +      PN  T+T+LI G+   G   +A +L N +
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 58/465 (12%)

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R+  Y E+      M  +   PDV+L   +I+G      +  A++++  + + G  PD +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YNALI GFC +  +D A  +   +  +D  P+T T+ I+I  +C  G +D A K+ N++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
               C P+V  +  LI+                                           
Sbjct: 220 LSDNCQPTVITYTILIEA------------------------------------------ 237

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            TM+E     G + +A K++ ++   G  PD+ TYN++I G CK G ++ A ++ + L+L
Sbjct: 238 -TMLE-----GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG  PD ++Y  L+  L    + E+  ++  +M    C P+   Y  L+T  CR  K   
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM--DFKLNDFQLAPYTI 640
           A +L L+ +++     D       I  F ++G ++ AI+ L  M  D  L D  +  Y  
Sbjct: 352 AMNL-LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--IVNYNT 408

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L  LC++G+  +AL IF  L E        S   +   L   G    A+ + L  + NG
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + P    Y        ++     A+ LL  M+S  +      Y
Sbjct: 469 --IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 169/642 (26%), Positives = 297/642 (46%), Gaps = 50/642 (7%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K    D+ W+   E+++  +      +  LI    K    ++A+E F ++      P VY
Sbjct: 285 KVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVY 344

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN ++        F  A ++     +  C+P+++ ++ ++  L + GK E A+++ DEM
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            Q    PN  TY I+I  LC+    + A ++   MK++G  P+ +  N +++  CK +++
Sbjct: 405 RQDAA-PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DEA ++    +     P   ++  LIDGL R  R D+AY+ Y KM +    P+VV+Y  +
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I+   + G+ +D  K+  +M  RG  PD    N+ +      G +++ R+L  EI  +  
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           +P+  +++ILI G+ + G   +  KLF +M++ G    V  +N +IDG CK+G+++KA  
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQ 643

Query: 435 LFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           L  +M+  G  PT+               +  ++V+       + +AY +  +    G  
Sbjct: 644 LLEEMKTKGLQPTV--------------VTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            +++ Y+SLI+GF KVG I+ A  + +EL  KGL P+S T+  L++ L + +  ++A   
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F  M    C+P+   Y  ++   C  RKF+ AF  W                  +E  ++
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW------------------QEMQKQ 791

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G   N I                 YT  + GL + G V EA  +F        +      
Sbjct: 792 GLKPNNI----------------TYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
             +I GL        A  VF  T   G  +  + C  LL +L
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 268/556 (48%), Gaps = 23/556 (4%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K     + ++FF     +  +    + + +I +L K    D   +  +EL          
Sbjct: 285 KVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVY 344

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY   G  ++A     + K   C P V  YN +L    RK     AL ++ EM
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + +  PN+ T+++LI+ L K+G+ E A+K+ D M + G+ PN  T  I+I  LC+  + 
Sbjct: 405 -RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA  +FL +    CSPD   + +L++G  +  RVD+A +L         +P +  Y+ L
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I   F+  R ++ +  Y++M      PD++L    +  + +AG+V+    L  +++ +G+
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD   Y+ LI G    G   +   L  E+ ++    +   +  +I G C++G VD A +
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQ 643

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGN 456
           L  +M+  G  P+V  + +++DGL K   L++A +LF + +   +  N  ++  L  G  
Sbjct: 644 LLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFG 703

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYK---ILMQLAESGNL----------------PDII 497
           +V        ++E+    GL   +Y    +L  L ++  +                P+ +
Sbjct: 704 KVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAM 763

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY+ +ING C +   N A   ++E+Q +GL+P+++TY T+I GL +     +A  +F + 
Sbjct: 764 TYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRF 823

Query: 558 PQNGCTPSPAVYKSLM 573
             +G  P  A Y +++
Sbjct: 824 KASGGVPDSACYNAMI 839



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 169/667 (25%), Positives = 297/667 (44%), Gaps = 33/667 (4%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
            G    V D+  VL +G +   D E+AL  F +M + +    V      +N+AF  Q F 
Sbjct: 65  EGMRKTVYDLCGVLENGLWG-PDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAF--QYFR 121

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
               V  +  + +C P +    L++  ++++   +   ++L+EM+  G   +      ++
Sbjct: 122 W---VERKTQQAHC-PEVYNAFLMV--MARTRNLDYLEQILEEMSVAGFGLSNHVSVELV 175

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +   + ++  EA+ +   M+     P F AY  L+       R D  L L    ++ G+ 
Sbjct: 176 ASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYE 235

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             +  ++ L+    R  R D A +   +M       D+VLY V I    + GKV  A K 
Sbjct: 236 ANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKF 295

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M+ +G+VPD   Y  LI   C    LD+A  L  E+    S+P  + +  +I G   
Sbjct: 296 FHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGS 355

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G  D+A  L  + ++ GC PSV  +N ++  L + G++E+A  +  +M     P L   
Sbjct: 356 AGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNL--- 412

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +   +++  C AG +  A K+   + E+G  P+I+T N +I+  CK  
Sbjct: 413 -----------TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A  +F  L  K   PDS T+ +LI+GL R  R +DA+ ++ +M  +   P+  VY 
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521

Query: 571 SLMT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           SL+   + C R++      ++ + +      D   + S ++   + GEVE       E+ 
Sbjct: 522 SLIQNFFKCGRKED--GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIK 579

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            +     +  Y+I + GL + G  +E   +F  + E    +   +   +I G CK G +D
Sbjct: 580 AQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVD 639

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
            A  +       G  L+P V  Y       +K ++   AY L    KS+G DL+  +Y  
Sbjct: 640 KAYQLLEEMKTKG--LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS- 696

Query: 748 TKSLLPG 754
             SL+ G
Sbjct: 697 --SLIDG 701



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 168/327 (51%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F ++K     PDV  Y+ +++   +         ++YEM +     ++
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + ++ +I+G  KSGK + A ++L+EM  +G+ P   TY  V+ GL +I+R DEAY LF +
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            K  G   + V Y++L++GF K+ R+DEA  +L    + G  P   +++CL+D L +A+ 
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            DEA   ++ M   K  P+ + Y +MI GL    K   A     +M+++G+ P+   Y  
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G    G + +AR L         +P++  +  +I G+       DA  +F +    G
Sbjct: 803 MIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKG 862

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLL 435
           C  +      L+D L KA  LE+A ++
Sbjct: 863 CRVNSKTCVVLLDALHKADCLEQAAIV 889



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 4/227 (1%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           +V+  L K +  D  +   +E +S  V +   ++  LI G+ KVG  ++A     ++ + 
Sbjct: 662 SVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 721

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P+ Y +N +L+   + +    A   +  M  L C PN +T+S++INGL    K   A
Sbjct: 722 GLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKA 781

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
                EM ++G+ PN  TYT +I+GL +     EA  LF + K SG  PD   YNA++ G
Sbjct: 782 FVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEG 841

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEA 292
                +  +A  +       G   R+ S +C  L+D L +A   ++A
Sbjct: 842 LSSANKAMDAYIVFEETRLKG--CRVNSKTCVVLLDALHKADCLEQA 886



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 3/210 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  L+EL    ++  S  +  L+    K  + ++A   F  MK 
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKN 755

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   Y+ ++N     + F  A   + EM K    PN +T++ +I GL+K+G    
Sbjct: 756 LKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVME 815

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + D     G +P+   Y  +I GL   N+A +AY +F + +  GC  +      LL+
Sbjct: 816 ARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLD 875

Query: 247 GFCKLRRVDEAL---ALLRSFEKDGFVPRL 273
              K   +++A    A+LR   K     RL
Sbjct: 876 ALHKADCLEQAAIVGAVLREMAKSQHATRL 905


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 254/528 (48%), Gaps = 59/528 (11%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           + + VLI+GY    + E+A     +M+E F   P +  +N VL+    K   +LA   ++
Sbjct: 155 ETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLH-GLCKSGKVLAAMDHF 213

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           E V+ +   +  TFS+LINGL K+G    A  +  E T  G   +  TYT +++ L +  
Sbjct: 214 EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNK 273

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA  L  K+  +GC+P    YNALLNG CK+ R++EA+ LLR    +G  P + +Y+
Sbjct: 274 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 333

Query: 278 CLIDGLFRAKRYDEAY-----------------------------------AWYRKMFEE 302
            LIDGL + KR  EAY                                   + Y+ M   
Sbjct: 334 SLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH 393

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PDVV    MI GLS+AG++  A+++   M  RG+ P+   Y+ALI G C    +D A
Sbjct: 394 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 453

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +  ++ K    P+T T+ ILI G+C++G V+ A+  F++M +AGC P V  +N LI G
Sbjct: 454 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 513

Query: 423 LCKAGELEKANLLFYKMEIGK------------------NPTLFLRLSQGGNRVHDKASL 464
           LCKAG  + A  +   M   +                     LF  + + G  V +  + 
Sbjct: 514 LCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSG--VANSQTR 571

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C A  + +A  +   + + G +P    YNS+I+   K G +N    +++E+  
Sbjct: 572 TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMT- 629

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           +  +PD VTY  L+NG+   +R + A   + +M   G  P  ++   L
Sbjct: 630 RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 256/574 (44%), Gaps = 59/574 (10%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEK 116
           RLR   S  AV+ +       DL W+    L S        V     L+  + +     +
Sbjct: 78  RLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHRE 137

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLI 175
           A            +PDV  +N ++      +    A AV  EM +     P++ T +L++
Sbjct: 138 AGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVL 197

Query: 176 NGLSKSGKTEVAI----------------------------------KMLDEMTQRGILP 201
           +GL KSGK   A+                                   +  E T  G   
Sbjct: 198 HGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTI 257

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           +  TYT +++ L +  +  EA  L  K+  +GC+P    YNALLNG CK+ R++EA+ LL
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 317

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           R    +G  P + +Y+ LIDGL + KR  EAY  +++M    +  D V Y  +IRGL + 
Sbjct: 318 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQT 377

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           GK+  A  +   M   G VPD    + +I G    G +  A  +   +  R   PN   +
Sbjct: 378 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 437

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
           + LI G+C+   +D A ++  +M+KA C P    +N LIDGLCK+G++E A   F +M E
Sbjct: 438 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 497

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P ++              +   ++   C AG    A  +L  ++ S        Y+
Sbjct: 498 AGCKPDVY--------------TYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYS 538

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           SL++G CK G + G   LF E++  G+  +S T   LI  L + +R ++A  +F  + + 
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKE 597

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
           G  P P  Y S+++   +  K +   +++ +  R
Sbjct: 598 G-MPHPYAYNSIISALIKSGKVNEGQAVYQEMTR 630



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 252/541 (46%), Gaps = 35/541 (6%)

Query: 219 ADEAYRLF--LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           AD A+ LF  L     G        NALL+ F + +R  EA  LL++     F P + ++
Sbjct: 98  ADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETW 157

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           + LI G   A+  +EA+A  R+M E+  + P +  + +++ GL ++GKV  AM     +R
Sbjct: 158 NVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR 217

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            R +      ++ LI G    G++ QA SL  E        + HT+T ++  + +N  + 
Sbjct: 218 -RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQ 276

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP--------- 445
           +A  L  K+   GC P++  +NAL++GLCK G LE+A +LL   ++ G  P         
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 336

Query: 446 -------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                         LF  ++  G  + D      ++      G I +A  +   +   G 
Sbjct: 337 DGLGKEKRSFEAYKLFKEMASRGLAL-DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGC 395

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           +PD++T +++I+G  K G I  A+++FK ++ +GL P+ V Y  LI+GL +  + + A  
Sbjct: 396 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 455

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +  QM +  CTP    Y  L+   C+      A + + + L      D  +   +   L 
Sbjct: 456 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLC 515

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           K    +A  G+L+ D   + F    Y+  + GLC+ G+++    +F  + E   +    +
Sbjct: 516 KAGNTDAACGVLD-DMSSSRFV---YSSLVDGLCKSGKLEGGCMLFHEM-ERSGVANSQT 570

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS-KDNKKVHAYHLLC 731
             +LI  LCK   +D A+ +F    K G +  P   N ++ +L+ S K N+    Y  + 
Sbjct: 571 RTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMT 629

Query: 732 R 732
           R
Sbjct: 630 R 630



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 217/438 (49%), Gaps = 21/438 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+++ L K          ++++ +   +     +  L++G  K+G  E+A++   K+ +
Sbjct: 263 TAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 322

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV  Y ++++   +++    A  ++ EM       + V ++ LI GL ++GK   
Sbjct: 323 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQ 382

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +   MT  G +P+  T + +I GL +  R   A R+F  M+  G +P+ V Y+AL++
Sbjct: 383 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 442

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK R++D AL +L   +K    P   +Y+ LIDGL ++   + A A++ +M E   +P
Sbjct: 443 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 502

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  Y ++I GL +AG    A  +L DM     V     Y++L+ G C  G L+    L 
Sbjct: 503 DVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLF 557

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +R  + N+ T T LI  +C+   VD+A  LFN + K G  P    +N++I  L K+
Sbjct: 558 HEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKS 615

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G++ +   ++ +M     P          +RV   A L  M+     A  + +A+   ++
Sbjct: 616 GKVNEGQAVYQEMTRWWKP----------DRVTYNALLNGMI----GANRMDRAHYYYLE 661

Query: 487 LAESGNLPDIITYNSLIN 504
           +   G +P +   + L +
Sbjct: 662 MTGRGYVPPVSILHKLAD 679


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 185/691 (26%), Positives = 306/691 (44%), Gaps = 93/691 (13%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLK-----PNGFDLYWQTLDEL 89
           S   + + P +  +      +R+ +R S  + +AV+S L +     P      +++L EL
Sbjct: 143 SAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIEL 202

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R   +      F +L+  +   G    AL +   M+ F   PD   YN +LN   RK + 
Sbjct: 203 R---LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGML 259

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A A+   M +    P   T++ L++  ++ G  + A K+++ MT  G  P+  TY ++
Sbjct: 260 GEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCS-PDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
             GLCQ  + DEA+RL  +M+  G + PD V YN L++   K R   +AL LL      G
Sbjct: 320 AMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKG 379

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P L +++ ++  L +  + +EA     K+ EE + PDV+ Y  +I    +AG V  A 
Sbjct: 380 VKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAF 439

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL----------------------- 365
            L+ +M  +G+  DT+  N ++   C +   + A  L                       
Sbjct: 440 TLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY 499

Query: 366 --------QVEIW----KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                    + +W    +R  +P+  T+  LI G+CR   + +A    N+  + G  P  
Sbjct: 500 FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDE 559

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N +I   CK G+LE A     KM E    P              D  +  T++   C
Sbjct: 560 TTYNIIIHAYCKEGDLENAFRFHNKMVENSFKP--------------DVVTCNTLMNGLC 605

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + KA K+     E G   D+ITYN+LI   CKVG+++ AL  F ++++KGL+PD+ 
Sbjct: 606 LHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAF 665

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  +++ L    R E+A  +  ++  +G                   K S +F+  L  
Sbjct: 666 TYNVVLSALSEAGRSEEAHNMLHKLADSG-------------------KLSQSFACPL-- 704

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           L+  S   DE+   ++E   K E E++         K  D  L  Y   L GLC  GQ+K
Sbjct: 705 LKPSSA--DEA--DVKEHEGKPEAESS--------EKAQDNALETYMERLNGLCTGGQLK 752

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           EA  +   +++    V   + + L+ GL KR
Sbjct: 753 EAKAVLDEMMQKGMPVDCSTYITLMEGLIKR 783



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 218/501 (43%), Gaps = 62/501 (12%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRY--DEAYAWYRK 298
           +A L+ + +LR    A  LL S  +  G  P L + + ++  L R+       +   +R 
Sbjct: 139 DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRS 198

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           + E ++ P+   + +++      G + DA+  LS M+  G+ PD   YN L+   C  G+
Sbjct: 199 LIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258

Query: 359 LDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           L +AR+L   + KRD + P   T+  L+    R G +  A K+   M   G  P +  +N
Sbjct: 259 LGEARALLARM-KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317

Query: 418 ALIDGLCKAGELEKANLLFYKME--------IGKNPTLF------------LRLSQGGNR 457
            L  GLC+AG++++A  L  +ME        +    TL             LRL +    
Sbjct: 318 VLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377

Query: 458 VHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              K +L T   +V+  C  G + +A   L ++AE G  PD+ITYN+LI+ +CK GN+  
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  L  E+  KGL+ D+ T  T++  L ++ R EDA  +    PQ G  P    Y ++M 
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
              +      A  LW Q               IE  L                       
Sbjct: 498 AYFKEYNPEPALRLWDQM--------------IERKLIPS-------------------- 523

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           ++ Y   + GLC+  ++KEA++  +  VE   +    +   +IH  CK G L+ A     
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 695 YTLKNGFILRPRVCNYLLRSL 715
             ++N F      CN L+  L
Sbjct: 584 KMVENSFKPDVVTCNTLMNGL 604



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 37/301 (12%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K  NP+   R +    +RK + S ++ + +I  L +          L+E
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNE 549

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
                +      + ++I  Y K GD E A     KM E   +PDV   N ++N       
Sbjct: 550 FVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL ++   V+     +++T++ LI  + K G  + A+   D+M  +G+ P+ FTY +
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 209 VISGLCQINRADEAYRLFLKMKDSG-------C-----------------------SPDF 238
           V+S L +  R++EA+ +  K+ DSG       C                       S + 
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEK 729

Query: 239 VAYNAL------LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF-RAKRYDE 291
              NAL      LNG C   ++ EA A+L    + G      +Y  L++GL  R KR   
Sbjct: 730 AQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKRQTH 789

Query: 292 A 292
           A
Sbjct: 790 A 790


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 270/564 (47%), Gaps = 21/564 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +++GY + G  E A      +      P+ Y Y  V+     +     ALAV  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C P    + +++    + G    A+++L+++  RG   +     +V++ +C     D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L   +   GC PD V+YNA+L G C  +R      L+    +    P + +++ LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R   ++  +    +M E    PD+ +Y  +I G+ + G ++ A ++L+ M   G+ 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+  CYN L+KG C     ++   L  E++ +D   +  TF IL+   C+NG+VD   +L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
             +M + GC P V  +  +I+G CK G +++A +L   M   G  P              
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP-------------- 472

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  S   +++  C+A     A  ++ Q+ + G   + IT+N+LIN  CK G +  A++L 
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K++ + G  PD ++Y T+I+GL +  + ++A  +   M   G +P+  +Y S+ +   R 
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 592

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + +    ++   ++D + R D  + +  I    ++GE E AI+ L  M         + 
Sbjct: 593 GRINKVIQMF-DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 651

Query: 638 YTIWLIGLCQDGQVKEALNIFSVL 661
           YTI + GL  +G VKEA  + + L
Sbjct: 652 YTILIRGLASEGFVKEAQEMLTEL 675



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 255/546 (46%), Gaps = 17/546 (3%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ ++ G  ++G+ E A ++   +    + PN +TY  V+  LC   R  +A  +  +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             GC+P    Y+ +L   C+      A+ +L      G    +G+ + +++ +      D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA    R +     EPDVV Y  +++GL  A +     +L+ +M      P+   +N LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
              C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M   G  
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+V  +N L+ GLC A   E+   L  +M     P              D  +   +V+ 
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL-------------DDVTFNILVDF 413

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G I+ A+ L K +   G +P+
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +++Y  ++ GL   +R  DA  +  QM Q GC  +P  + +L+ + C++     A  L  
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533

Query: 591 QYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           Q L +    D  S  ++ + L K G+ + A++ L  M  K        Y+     L ++G
Sbjct: 534 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++ + + +F  + +            +I  LCKRG  + A++   Y + +G +       
Sbjct: 594 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653

Query: 710 YLLRSL 715
            L+R L
Sbjct: 654 ILIRGL 659



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  L+ G       E+  E   +M +
Sbjct: 338 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 397

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M++  C+P+++T++ +ING  K G  + 
Sbjct: 398 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 457

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  MT  G  PN  +YTIV+ GLC   R  +A  L  +M   GC  + + +N L+N
Sbjct: 458 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 517

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + DEA      M  + + P
Sbjct: 518 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 577

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G++   +++  ++++  I  D   YNA+I   C  G  ++A    
Sbjct: 578 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 637

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+TILI G+   G V +AQ++  ++   G
Sbjct: 638 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 209/478 (43%), Gaps = 19/478 (3%)

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++ G  RA + + A    R      + P+   Y  ++R L   G++ DA+ +L +M 
Sbjct: 130 YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG  P    Y+ +++  C  G    A  +  ++  R    +     +++  +C  G VD
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           +A  L   +   GC P V  +NA++ GLC A        L  +M         +R++   
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM---------VRMACPP 297

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           N V    +  T++   C  GL  + +++L Q+ E G  PDI  Y ++I+G CK G++  A
Sbjct: 298 NIV----TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            ++   +   GL+P+ V Y TL+ GL   +R E+   +  +M    C      +  L+ +
Sbjct: 354 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+         L  Q L      D  +  + I  F ++G ++ A+  L  M        
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              YTI L GLC   +  +A ++ S +++    + P +   LI+ LCK+G ++ A+++  
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             L NG    P + +Y        K  K   A  LL  M + G   +  +Y    S L
Sbjct: 534 QMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 139/276 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+  + + G  ++ +E   +M E  C PDV  Y  V+N   ++ L   A+ +   M
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 465

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C PN +++++++ GL  + +   A  ++ +M Q+G   N  T+  +I+ LC+    
Sbjct: 466 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 525

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M  +GCSPD ++Y+ +++G  K  + DEAL LL      G  P    YS +
Sbjct: 526 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 585

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
              L R  R ++    +  + +  I  D VLY  +I  L + G+ + A++ L+ M   G 
Sbjct: 586 ASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGC 645

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
           VP+   Y  LI+G    G + +A+ +  E+  + +L
Sbjct: 646 VPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 67/136 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    D   + L+ + +  +S  + ++  + S   + G   K ++ F  +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+     MV   C+PN  T+++LI GL+  G  
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665

Query: 185 EVAIKMLDEMTQRGIL 200
           + A +ML E+  +G L
Sbjct: 666 KEAQEMLTELCSKGAL 681


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 201/779 (25%), Positives = 338/779 (43%), Gaps = 119/779 (15%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD-LYWQTLD 87
           L++T V  V+   KNP++G +FFIWA ++            +  +L   G D +  Q L 
Sbjct: 127 LNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLR 186

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R  +  ++  +  VLI    + G    ALE  G++K+   +P    YNA++ +     
Sbjct: 187 EIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEAD 246

Query: 148 LFLLALAVYYEM---------VKLNCLPNI-----------------------VTFSLLI 175
               A  V+ EM           L C  ++                       V ++ +I
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMI 306

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL---------------------- 213
           +GL ++   E A+  L  M     +PN  TY I++ G                       
Sbjct: 307 SGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY 366

Query: 214 -------------CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
                        C+      AY+L  KM D GC P +V YN L+ G C   ++  +L +
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PSLDV 425

Query: 261 LRSFEKDGFVPRLGSYSCL----IDGLFR----AKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           L   EK  +   L ++  L    +  L R    A ++++AY+  R+M  +   PD   Y 
Sbjct: 426 LELAEK-AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I  L  A KV +A  L  +M+   +VPD + Y  LI  FC +GLL QAR    E+ + 
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN  T+T LI    +   +  A +LF  M   GC P+V  + ALIDG CK+G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 433 NLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             ++ +M       +  ++ ++  G  R  +  +   +V+  C A  + +A  +L  ++ 
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P+ I Y++LI+GFCKVG ++ A  +F ++  +G  P+  TY +LI+ L +  R + 
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDI- 596
           A ++  +M +N C P+  +Y  ++   C+  K   A+ L             + Y   I 
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784

Query: 597 ----SGRDDESMKSIEEFLQKGEVENAIQ-----------GLLEMDFKLNDFQLAPYTIW 641
               +G+ D+ ++ + +   KG   N +            GLL+   +L D     Y  W
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTY--W 842

Query: 642 LIGLCQDGQVKEALN--------IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
              +    +V E  N        +   + E  A+   P+   LI   CK G L+LA+++
Sbjct: 843 PKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL 901



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 290/627 (46%), Gaps = 45/627 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQL-----FLLAL 153
           +F  LI  Y + GD   A +   KM +  CQP   +YN ++  I   ++L       LA 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+  + + N V  S L   L  +GK E A  ++ EM  +G +P+  TY+ VI  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  ++ D A+ LF +MK +   PD   Y  L++ FCK+  + +A        +DG  P +
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +A++   A   +  M  E   P+VV Y  +I G  ++G+++ A ++ + 
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR    +PD   Y  +  G                   RD  PN  T+  L+ G+C+   
Sbjct: 611 MRGNADIPDVDMYFKIDDGNI-----------------RD--PNIFTYGALVDGLCKAHK 651

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V +A+ L + M   GC P+  +++ALIDG CK G+L++A ++F KM E G  P ++    
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY---- 707

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +  +++++      +  A K+L ++ E+   P++I Y  +I+G CKVG  
Sbjct: 708 ----------TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A +L   ++ KG  P+ VTY  +I+G  +  + +    +  QM   GC P+   Y+ L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C       A  L  +  +    +     + + E   +  + +   GLL+   +   
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL--GLLDEIAENVA 875

Query: 633 FQLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLA 689
             + P Y I +   C+ G+++ AL +   +  C +       +   LI  L     +D A
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKA 935

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLL 716
            +++   +K G I    +  YL++ L+
Sbjct: 936 FELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 252/503 (50%), Gaps = 37/503 (7%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESF 121
           ++ S VI +L   +  D  +   +E++S +V  V DVF   +LI  + KVG  ++A + F
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHV--VPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M    C P+V  Y A+++   + +    A  ++  M+   C+PN+VT++ LI+G  KS
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 182 GKTEVAIKMLDEMTQRGILP----------------NKFTYTIVISGLCQINRADEAYRL 225
           G+ E A ++   M     +P                N FTY  ++ GLC+ ++  EA  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC P+ + Y+AL++GFCK+ ++DEA  +     + G+ P + +YS LID LF+
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            KR D A     +M E    P+V++Y  MI GL + GK  +A +L+S M E+G  P+   
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y A+I GF   G +D+   L  ++  +   PN  T+ +LI   C  G++DDA +L ++M+
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +      +  +  +I+G  +   +    L     EI +N  + +             + +
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFIISLGLL----DEIAENVAVPI-----------IPAYR 883

Query: 466 TMVEQYCTAGLIHKAYKI--LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            +++ +C AG +  A ++   M    S +  D   Y+SLI        ++ A +L+ ++ 
Sbjct: 884 ILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 524 LKGLRPDSVTYGTLINGLQRVDR 546
            +G  P+   +  L+ GL R++R
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINR 966



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 253/574 (44%), Gaps = 52/574 (9%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LI    ++G   VA++ L  +   G  P++ TY  ++    + +R D AY +  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           DSG + D       ++  CK  R  EALAL+   EK+ F      Y+ +I GL  A  ++
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA  +  +M      P+VV Y +++ G     ++    ++LS M   G  P    +N+LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN------GMVDDAQKLFNKM 404
             +C  G    A  L  ++      P    + ILI G+C N       +++ A+K + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
             A    +    + L   LC AG+ EKA  +  +M           +S+G   + D ++ 
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM-----------MSKG--FIPDTSTY 483

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C A  +  A+ +  ++  +  +PD+ TY  LI+ FCKVG +  A K F E+  
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  P+ VTY  LI+   +  +   A  +F  M   GC P+   Y +L+   C+  +   
Sbjct: 544 DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           A  ++ +       R +  +  ++ + +              D  + D  +  Y   + G
Sbjct: 604 ACQIYARM------RGNADIPDVDMYFKID------------DGNIRDPNIFTYGALVDG 645

Query: 645 LCQDGQVKEALNIFSVL----VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           LC+  +VKEA ++  V+     E   IV       LI G CK G LD A  VF    + G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDA----LIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 701 FILRPRVCNY-LLRSLLFSKDNKKVHAYHLLCRM 733
           +   P V  Y  L   LF KD +   A  +L RM
Sbjct: 702 Y--GPNVYTYSSLIDRLF-KDKRLDLALKVLSRM 732


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 175/616 (28%), Positives = 284/616 (46%), Gaps = 20/616 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V  VL+  Y K G    A +    M +    P     N +L    R     L   +   M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P++ T+S  +    K+   + A K+ +EM +R    N+ TY ++ISGLC+    
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA+    +M D G SPD   Y AL+NG CK  R+ EA ALL      G  P +  Y+ L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG  +  +  EA+    +M    ++P+ ++Y  +IRGL + G++  A KLL++M + G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PDT+ Y+ L++G       D A  L  E+     LPN +T+ I+I G+C+NG   +A  
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L  +M   G  P+  M+  LI G  K G +  A      M                N + 
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM-------------TKANVLP 523

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D     ++++   T G I +A +   Q+ + G +PD  TY+ LI+G+CK  N+  A +L 
Sbjct: 524 DLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLL 583

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +++   GL+P++ TY  L+ G  + +  E    I   M  +G  P   +Y  ++    R 
Sbjct: 584 QQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRS 643

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
               +AF +  +  ++    D     S I    +  ++E A+  L EM  +  +  +  Y
Sbjct: 644 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCY 703

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLY 695
              + G C+ G +  A N+F  ++  K ++  P+CV    LI G CK G +  A D++  
Sbjct: 704 NALIDGFCRSGDISRARNVFDSIL-AKGLL--PNCVTYTALIDGNCKNGDITDAFDLYKD 760

Query: 696 TLKNGFILRPRVCNYL 711
            L  G      V N L
Sbjct: 761 MLDRGIAPDAFVYNVL 776



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/648 (25%), Positives = 298/648 (45%), Gaps = 32/648 (4%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           LL+ +  +L W+    +    +      +   +  + K  D + A + F +M+  DC  +
Sbjct: 220 LLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMN 279

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
              YN +++   R      A     EMV     P+  T+  L+NGL K G+ + A  +LD
Sbjct: 280 EVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLD 339

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM+  G+ PN   Y  ++ G  +  +A EA+ +  +M  +G  P+ + Y+ L+ G CK+ 
Sbjct: 340 EMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIG 399

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           ++  A  LL    K G  P   +Y  L+ G F+    D A+    +M    I P+   YG
Sbjct: 400 QLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYG 459

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           +MI GL + G+ K+A  LL +M   G+ P+ + Y  LI G    G +  A      + K 
Sbjct: 460 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA 519

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           + LP+   +  LI G+   G +++A++ + +++K G  P    ++ LI G CK   LEKA
Sbjct: 520 NVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKA 579

Query: 433 NLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG-------------- 475
           + L  +M    +  N   +  L +G  + +D   + ++++    +G              
Sbjct: 580 DQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRN 639

Query: 476 -----LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
                 +  A+ +L ++ ++G +PD+  Y+SLI+G CK+ ++  A+ L  E+  +GL P 
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V Y  LI+G  R      A  +F  +   G  P+   Y +L+  +C+    + AF L+ 
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLY- 758

Query: 591 QYLRDISGRDDESMKSIEEFLQKG-----EVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
              +D+  R       +   L  G     ++E A+    EM F      ++ ++  + G 
Sbjct: 759 ---KDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYAHVSLFSTLVRGF 814

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           C+ G+++E   +  V+++ + +    +   +I    K G L  A  VF
Sbjct: 815 CKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVF 862



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 233/477 (48%), Gaps = 20/477 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+++  D + A E   +M+     P+ Y Y  ++N   +      A  +  EM
Sbjct: 422 TYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM 481

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PN   ++ LI G SK G   +A + L+ MT+  +LP+ F Y  +I GL  + R 
Sbjct: 482 ISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA   + +++  G  PD   Y+ L++G+CK R +++A  LL+     G  P   +Y+ L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++G F++  +++  +  + M     +PD  +YG++IR LS +  ++ A  +L+++ + G+
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD + Y++LI G C +  +++A  L  E+ K    P    +  LI G CR+G +  A+ 
Sbjct: 662 VPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARN 721

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQGGN 456
           +F+ +   G  P+   + ALIDG CK G++  A  L+  M + G  P  F+   L+ G +
Sbjct: 722 VFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS 781

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D      + E+    G  H                 +  +++L+ GFCK G +    
Sbjct: 782 DAADLEQALFLTEEMFNRGYAH-----------------VSLFSTLVRGFCKRGRLQETE 824

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           KL   +  + + P++ T   +I    +  +  +A R+F ++ Q   + S     SL+
Sbjct: 825 KLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 156/347 (44%), Gaps = 2/347 (0%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
            ++    KR  +    + S +I    K    +   Q L ++ +  +   +D +  L+ GY
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGY 605

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K  D EK       M     +PD +IY  V+    R +   +A  V  E+ K   +P++
Sbjct: 606 FKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL 665

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +S LI+GL K    E A+ +LDEM + G+ P    Y  +I G C+      A  +F  
Sbjct: 666 HIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDS 725

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+ V Y AL++G CK   + +A  L +     G  P    Y+ L  G   A  
Sbjct: 726 ILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAAD 785

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A     +MF       V L+  ++RG  + G++++  KLL  M +R IVP+      
Sbjct: 786 LEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVEN 844

Query: 349 LIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMV 394
           +I  F   G L +A  +  E+  K+ S  +T  F++L   M   G++
Sbjct: 845 VITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDMINKGLI 891



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 137/344 (39%), Gaps = 23/344 (6%)

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDK-------- 461
           PS   F  L   LC A    +AN L ++M +   +P L L   Q   +  D         
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPS 172

Query: 462 ---ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
              A L  +V+ Y   G +  A ++++ + + G  P     N L+    +   +    KL
Sbjct: 173 HSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL 232

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              ++  G+ PD  TY T +    +    + A ++F +M +  C  +   Y  +++  CR
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL-EMDFKLNDFQLAP 637
                 AF    + +      D  +  ++   L KG      + LL EM        +  
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLY 695
           Y   + G  ++G+  EA +I + ++   A V P   +   LI GLCK G L  A  +   
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMI--SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410

Query: 696 TLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            +K G   RP    Y  L++      D  K  A+ LL  M++ G
Sbjct: 411 MIKVGH--RPDTFTYHPLMQGHFQHYD--KDGAFELLNEMRNSG 450



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 36/266 (13%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           + +++N +V F       K   +      S++IS L K    +     LDE+    +   
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
              +  LI G+ + GD  +A                 +++++L                 
Sbjct: 700 IVCYNALIDGFCRSGDISRARN---------------VFDSILAKGL------------- 731

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
                  LPN VT++ LI+G  K+G    A  +  +M  RGI P+ F Y ++ +G     
Sbjct: 732 -------LPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAA 784

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             ++A  L  +M + G +     ++ L+ GFCK  R+ E   LL        VP   +  
Sbjct: 785 DLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVE 843

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEK 303
            +I    +A +  EA+  + ++ ++K
Sbjct: 844 NVITEFGKAGKLCEAHRVFAELQQKK 869


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 202/782 (25%), Positives = 339/782 (43%), Gaps = 125/782 (15%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD----LYWQ 84
           L++T V  V+   KNP++G +FFIWA ++     +     V   LL+  G      +  Q
Sbjct: 127 LNETLVVDVLSLVKNPELGVKFFIWAGRQI---GYGHTGPVYHALLEVLGCGGNDRVPEQ 183

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            L E+R  +  ++  +  VLI    + G    ALE  G++K+   +P    YNA++ +  
Sbjct: 184 FLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 145 RKQLFLLALAVYYEM---------VKLNCLPNI-----------------------VTFS 172
                  A  V+ EM           L C  ++                       V ++
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYT 303

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL------------------- 213
            +I+GL ++   E A+  L  M     +PN  TY I++ G                    
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 214 ----------------CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                           C+      AY+L  KM D GC P +V YN L+ G C   ++  +
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PS 422

Query: 258 LALLRSFEKDGFVPRLGSYSCL----IDGLFR----AKRYDEAYAWYRKMFEEKIEPDVV 309
           L +L   EK  +   L ++  L    +  L R    A ++++AY+  R+M  +   PD  
Sbjct: 423 LDVLELAEK-AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTS 481

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I  L  A KV +A  L  +M+   +VPD + Y  LI  FC +GLL QAR    E+
Sbjct: 482 TYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEM 541

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            +    PN  T+T LI    +   +  A +LF  M   GC P+V  + ALIDG CK+G++
Sbjct: 542 VRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQI 601

Query: 430 EKANLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           EKA  ++ +M       +  ++ ++  G  R  +  +   +V+  C A  + +A  +L  
Sbjct: 602 EKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDV 661

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           ++  G  P+ I Y++LI+GFCKVG ++ A  +F ++  +G  P+  TY +LI+ L +  R
Sbjct: 662 MSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKR 721

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLR 594
            + A ++  +M +N C P+  +Y  ++   C+  K   A+ L             + Y  
Sbjct: 722 LDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTA 781

Query: 595 DI-----SGRDDESMKSIEEFLQKGEVENAIQ-----------GLLEMDFKLNDFQLAPY 638
            I     +G+ D+ ++ + +   KG   N +            GLL+   +L D     Y
Sbjct: 782 MIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTY 841

Query: 639 TIWLIGLCQDGQVKEALN--------IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
             W   +    +V E  N        +   + E  A+   P+   LI   CK G L+LA+
Sbjct: 842 --WPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELAL 899

Query: 691 DV 692
           ++
Sbjct: 900 EL 901



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 178/705 (25%), Positives = 313/705 (44%), Gaps = 67/705 (9%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
            E  + FLS+   +S I       V +R  +    RKR         ++SM++    +  
Sbjct: 315 FEEAMDFLSRMRSSSCIPNV----VTYRILLCGCLRKR--QLGRCKRILSMMITEGCYP- 367

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
                             +F  LI  Y + GD   A +   KM +  CQP   +YN ++ 
Sbjct: 368 ---------------SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG 412

Query: 142 -IAFRKQL-----FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
            I   ++L       LA   Y EM+  + + N V  S L   L  +GK E A  ++ EM 
Sbjct: 413 GICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM 472

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            +G +P+  TY+ VI  LC  ++ D A+ LF +MK +   PD   Y  L++ FCK+  + 
Sbjct: 473 SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQ 532

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +A        +DG  P + +Y+ LI    +A++   A   +  M  E   P+VV Y  +I
Sbjct: 533 QARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  ++G+++ A ++ + MR    +PD   Y  +  G                   RD  
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI-----------------RD-- 633

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN  T+  L+ G+C+   V +A+ L + M   GC P+  +++ALIDG CK G+L++A ++
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 436 FYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F KM E G  P ++              +  +++++      +  A K+L ++ E+   P
Sbjct: 694 FTKMSERGYGPNVY--------------TYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++I Y  +I+G CKVG  + A +L   ++ KG  P+ VTY  +I+G  +  + +    + 
Sbjct: 740 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            QM   GC P+   Y+ L+   C       A  L  +  +    +     + + E   + 
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE 859

Query: 615 EVENAIQGLLEMDFKLNDFQLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            + +   GLL+   +     + P Y I +   C+ G+++ AL +   +  C +       
Sbjct: 860 FIISL--GLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKD 917

Query: 674 V--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           +   LI  L     +D A +++   +K G I    +  YL++ L+
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 259/510 (50%), Gaps = 37/510 (7%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESF 121
           ++ S VI +L   +  D  +   +E++S +V  V DVF   +LI  + KVG  ++A + F
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHV--VPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M    C P+V  Y A+++   + +    A  ++  M+   C+PN+VT++ LI+G  KS
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 182 GKTEVAIKMLDEMTQRGILP----------------NKFTYTIVISGLCQINRADEAYRL 225
           G+ E A ++   M     +P                N FTY  ++ GLC+ ++  EA  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC P+ + Y+AL++GFCK+ ++DEA  +     + G+ P + +YS LID LF+
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            KR D A     +M E    P+V++Y  MI GL + GK  +A +L+S M E+G  P+   
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y A+I GF   G +D+   L  ++  +   PN  T+ +LI   C  G++DDA +L ++M+
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +      +  +  +I+G  +   +    L     EI +N  + +             + +
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFIISLGLL----DEIAENVAVPI-----------IPAYR 883

Query: 466 TMVEQYCTAGLIHKAYKILMQLAE--SGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            +++ +C AG +  A ++  +++   S +  D   Y+SLI        ++ A +L+ ++ 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            +G  P+   +  L+ GL R++R E+A ++
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 253/574 (44%), Gaps = 52/574 (9%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LI    ++G   VA++ L  +   G  P++ TY  ++    + +R D AY +  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           DSG + D       ++  CK  R  EALAL+   EK+ F      Y+ +I GL  A  ++
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA  +  +M      P+VV Y +++ G     ++    ++LS M   G  P    +N+LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN------GMVDDAQKLFNKM 404
             +C  G    A  L  ++      P    + ILI G+C N       +++ A+K + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
             A    +    + L   LC AG+ EKA  +  +M           +S+G   + D ++ 
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM-----------MSKG--FIPDTSTY 483

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C A  +  A+ +  ++  +  +PD+ TY  LI+ FCKVG +  A K F E+  
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  P+ VTY  LI+   +  +   A  +F  M   GC P+   Y +L+   C+  +   
Sbjct: 544 DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           A  ++ +       R +  +  ++ + +              D  + D  +  Y   + G
Sbjct: 604 ACQIYARM------RGNADIPDVDMYFKID------------DGNIRDPNIFTYGALVDG 645

Query: 645 LCQDGQVKEALNIFSVL----VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           LC+  +VKEA ++  V+     E   IV       LI G CK G LD A  VF    + G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDA----LIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 701 FILRPRVCNY-LLRSLLFSKDNKKVHAYHLLCRM 733
           +   P V  Y  L   LF KD +   A  +L RM
Sbjct: 702 Y--GPNVYTYSSLIDRLF-KDKRLDLALKVLSRM 732


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 201/779 (25%), Positives = 338/779 (43%), Gaps = 119/779 (15%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD-LYWQTLD 87
           L++T V  V+   KNP++G +FFIWA ++            +  +L   G D +  Q L 
Sbjct: 127 LNETLVVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLR 186

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R  +  ++  +  VLI    + G    ALE  G++K+   +P    YNA++ +     
Sbjct: 187 EIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEAD 246

Query: 148 LFLLALAVYYEM---------VKLNCLPNI-----------------------VTFSLLI 175
               A  V+ EM           L C  ++                       V ++ +I
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMI 306

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG----------------------- 212
           +GL ++   E A+  L  M     +PN  TY I++ G                       
Sbjct: 307 SGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY 366

Query: 213 ------------LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
                        C+      AY+L  KM D GC P +V YN L+ G C   ++  +L +
Sbjct: 367 PSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PSLDV 425

Query: 261 LRSFEKDGFVPRLGSYSCL----IDGLFR----AKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           L   EK  +   L ++  L    +  L R    A ++++AY+  R+M  +   PD   Y 
Sbjct: 426 LELAEK-AYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I  L  A KV +A  L  +M+   +VPD + Y  LI  FC +GLL QAR    E+ + 
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN  T+T LI    +   +  A +LF  M   GC P+V  + ALIDG CK+G++EKA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 433 NLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             ++ +M       +  ++ ++  G  R  +  +   +V+  C A  + +A  +L  ++ 
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSV 664

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P+ I Y++LI+GFCKVG ++ A  +F ++  +G  P+  TY +LI+ L +  R + 
Sbjct: 665 EGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDL 724

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDI- 596
           A ++  +M +N C P+  +Y  ++   C+  K   A+ L             + Y   I 
Sbjct: 725 ALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMID 784

Query: 597 ----SGRDDESMKSIEEFLQKGEVENAIQ-----------GLLEMDFKLNDFQLAPYTIW 641
               +G+ D+ ++ + +   KG   N +            GLL+   +L D     Y  W
Sbjct: 785 GFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTY--W 842

Query: 642 LIGLCQDGQVKEALN--------IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
              +    +V E  N        +   + E  A+   P+   LI   CK G L+LA+++
Sbjct: 843 PKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALEL 901



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 290/627 (46%), Gaps = 45/627 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQL-----FLLAL 153
           +F  LI  Y + GD   A +   KM +  CQP   +YN ++  I   ++L       LA 
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+  + + N V  S L   L  +GK E A  ++ EM  +G +P+  TY+ VI  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  ++ D A+ LF +MK +   PD   Y  L++ FCK+  + +A        +DG  P +
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +A++   A   +  M  E   P+VV Y  +I G  ++G+++ A ++ + 
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR    +PD   Y  +  G                   RD  PN  T+  L+ G+C+   
Sbjct: 611 MRGNADIPDVDMYFKIDDGNI-----------------RD--PNIFTYGALVDGLCKAHK 651

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V +A+ L + M   GC P+  +++ALIDG CK G+L++A ++F KM E G  P ++    
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY---- 707

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +  +++++      +  A K+L ++ E+   P++I Y  +I+G CKVG  
Sbjct: 708 ----------TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A +L   ++ KG  P+ VTY  +I+G  +  + +    +  QM   GC P+   Y+ L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C       A  L  +  +    +     + + E   +  + +   GLL+   +   
Sbjct: 818 INHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL--GLLDEIAENVA 875

Query: 633 FQLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLA 689
             + P Y I +   C+ G+++ AL +   +  C +       +   LI  L     +D A
Sbjct: 876 VPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKA 935

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLL 716
            +++   +K G I    +  YL++ L+
Sbjct: 936 FELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 259/510 (50%), Gaps = 37/510 (7%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESF 121
           ++ S VI +L   +  D  +   +E++S +V  V DVF   +LI  + KVG  ++A + F
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHV--VPDVFTYTILIDSFCKVGLLQQARKWF 538

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M    C P+V  Y A+++   + +    A  ++  M+   C+PN+VT++ LI+G  KS
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598

Query: 182 GKTEVAIKMLDEMTQRGILP----------------NKFTYTIVISGLCQINRADEAYRL 225
           G+ E A ++   M     +P                N FTY  ++ GLC+ ++  EA  L
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC P+ + Y+AL++GFCK+ ++DEA  +     + G+ P + +YS LID LF+
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            KR D A     +M E    P+V++Y  MI GL + GK  +A +L+S M E+G  P+   
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y A+I GF   G +D+   L  ++  +   PN  T+ +LI   C  G++DDA +L ++M+
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK 838

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +      +  +  +I+G  +   +    L     EI +N  + +             + +
Sbjct: 839 QTYWPKHMAGYRKVIEGFNREFIISLGLL----DEIAENVAVPI-----------IPAYR 883

Query: 466 TMVEQYCTAGLIHKAYKILMQLAE--SGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            +++ +C AG +  A ++  +++   S +  D   Y+SLI        ++ A +L+ ++ 
Sbjct: 884 ILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMI 943

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            +G  P+   +  L+ GL R++R E+A ++
Sbjct: 944 KRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 253/574 (44%), Gaps = 52/574 (9%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LI    ++G   VA++ L  +   G  P++ TY  ++    + +R D AY +  +M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           DSG + D       ++  CK  R  EALAL+   EK+ F      Y+ +I GL  A  ++
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFE 316

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA  +  +M      P+VV Y +++ G     ++    ++LS M   G  P    +N+LI
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLI 376

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN------GMVDDAQKLFNKM 404
             +C  G    A  L  ++      P    + ILI G+C N       +++ A+K + +M
Sbjct: 377 HAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEM 436

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
             A    +    + L   LC AG+ EKA  +  +M           +S+G   + D ++ 
Sbjct: 437 LDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREM-----------MSKG--FIPDTSTY 483

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C A  +  A+ +  ++  +  +PD+ TY  LI+ FCKVG +  A K F E+  
Sbjct: 484 SKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVR 543

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  P+ VTY  LI+   +  +   A  +F  M   GC P+   Y +L+   C+  +   
Sbjct: 544 DGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEK 603

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           A  ++ +       R +  +  ++ + +              D  + D  +  Y   + G
Sbjct: 604 ACQIYARM------RGNADIPDVDMYFKID------------DGNIRDPNIFTYGALVDG 645

Query: 645 LCQDGQVKEALNIFSVL----VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           LC+  +VKEA ++  V+     E   IV       LI G CK G LD A  VF    + G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDA----LIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 701 FILRPRVCNY-LLRSLLFSKDNKKVHAYHLLCRM 733
           +   P V  Y  L   LF KD +   A  +L RM
Sbjct: 702 Y--GPNVYTYSSLIDRLF-KDKRLDLALKVLSRM 732


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 180/641 (28%), Positives = 304/641 (47%), Gaps = 17/641 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G+ K G+ E+AL    +M     + +V  YNA++    +      A++++ EM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P+  T++LLI+G  KS     A ++L EM  R + P+ FTY+++ISGLC  +  
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  +  +M  +G  P+   Y  L+  + +  R + A+ LL+    +G +P L  Y+CL
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL RAK+ +EA      M E+ I+P+   YG  I   S++G+++ A +   DM   GI
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+   Y  LIKG CD+G   +A S    + ++  +P+   ++ +I  + +NG   +A  
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F K  K G  P V ++N+LI G CK G++EKA+ L+ +M   G NP + +        +
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVY----NTLI 703

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           +D          YC +G + +A+K+  ++   G  PD   Y  LI+G  K GN+  AL L
Sbjct: 704 NDYG--------YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 755

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F E Q K +   S  + +LI+   +  +  +A  +F  M     TP+   Y  L+    +
Sbjct: 756 FHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 814

Query: 579 RRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
                 A  L+L    R+I          +  + Q G     I    +M+ +        
Sbjct: 815 AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 874

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y +     C++G+  EAL + +  +     +       LI  LCK   +   +++     
Sbjct: 875 YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 934

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           K    L  + CN LL  L F K   +  A  +L  M+ +G+
Sbjct: 935 KEELSLSSKTCNTLL--LGFYKSGNEDEASKVLGVMQRLGW 973



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 284/625 (45%), Gaps = 55/625 (8%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQ 130
           LLK N   L+W+    +      +V DV+    +I  + KVGD  K      +M E +C+
Sbjct: 217 LLKANMMGLFWKVYGSMVEA--KIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECK 273

Query: 131 PDVYIYNAVLN-----------IAFRKQLFLLALA------------------------V 155
           P+++ YNA +            +  +K +    L                         +
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +  M      PN  T++ LI+G  K G  E A+++ DEM  RG+  N  TY  +I G+ +
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                +A  LF +M  +G  PD   YN L++G+ K   + +A  LL   +     P   +
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS LI GL  +    +A     +M    ++P+V +YG +I+   +  + + A++LL  M 
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G++PD +CYN LI G C    +++A+ L V++ ++   PN HT+   I    ++G + 
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQ 573

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A++ F  M  +G  P+  ++  LI G C  G   +A   F  M           L +G 
Sbjct: 574 VAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM-----------LEKG- 621

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
             + D  +   ++      G   +A  + ++  ++G +PD+  YNSLI+GFCK G+I  A
Sbjct: 622 -LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680

Query: 516 LKLFKELQLKGLRPDSVTYGTLIN--GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +L+ E+   G+ P+ V Y TLIN  G  +     +AF++F +M   G +P   +Y  L+
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 740

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
               +      A SL+ +  +   G        I+ F + G+V  A +   +M  K    
Sbjct: 741 DGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTP 800

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIF 658
            +  YTI +    +   ++EA  +F
Sbjct: 801 NIVTYTILIDAYGKAEMMEEAEQLF 825



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/597 (26%), Positives = 273/597 (45%), Gaps = 60/597 (10%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           +G M E    PDVY Y  V+    +    +    V  EM K  C PN+ T++  I GL +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQ 288

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G  + A+++   M ++G+ P+  TYT+++ G C+  R+ EA  +F  M  SG +P+   
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y AL++GF K   ++EAL +       G    + +Y+ +I G+ +A    +A + + +M 
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              IEPD   Y ++I G  ++  +  A +LL++M+ R + P  + Y+ LI G C    L 
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  ++ +    PN   +  LI    +    + A +L   M   G  P +  +N LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            GLC+A ++E+A +L   M E G  P              +  +    +  Y  +G I  
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKP--------------NAHTYGAFINLYSKSGEIQV 574

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A +    +  SG +P+ + Y  LI G C VGN   AL  FK +  KGL PD   Y  +I+
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD---- 595
            L +  + ++A  +F +  + G  P   +Y SL++  C+      A  L+ + L +    
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694

Query: 596 ---------------ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--- 637
                           SG   E+ K  +E + KG                    ++P   
Sbjct: 695 NIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG--------------------ISPDGY 734

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            Y I + G  ++G +++AL++F    + K++ +  +   LI   CK G +  A ++F
Sbjct: 735 IYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELF 790



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 249/535 (46%), Gaps = 29/535 (5%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           RK   S  + S +IS L   +      + LD++    V     ++  LI  Y +    E 
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+E    M      PD++ YN ++    R +    A  +  +M +    PN  T+   IN
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
             SKSG+ +VA +   +M   GI+PN   YTI+I G C +    EA   F  M + G  P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  AY+A+++   K  +  EA+ +   F K G VP +  Y+ LI G  +    ++A   Y
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684

Query: 297 RKMFEEKIEPDVVLYGVMIR--GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            +M    I P++V+Y  +I   G  ++G + +A KL  +M  +GI PD Y Y  LI G  
Sbjct: 685 DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 744

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G L++A SL  E  ++ S+ +   F  LI   C++G V +A++LF+ M      P++ 
Sbjct: 745 KEGNLEKALSLFHEAQQK-SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 803

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKN--------PTLFLRLSQGGNRVH------- 459
            +  LID   KA  +E+A  LF  ME  +N         +L L  +Q GNR         
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMET-RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 862

Query: 460 --------DKASLQTMVEQYCTAGLIHKAYKILMQ-LAESGNLPDIITYNSLINGFCKVG 510
                   D  +   M   YC  G   +A K+L + L E   L D + +++LI   CK  
Sbjct: 863 MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV-FDALIFHLCKEK 921

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            I+  L+L  E+  + L   S T  TL+ G  +   E++A ++ G M + G  P+
Sbjct: 922 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 976



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 158/605 (26%), Positives = 261/605 (43%), Gaps = 56/605 (9%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           ++S+L   L  SG    A  ML+++ Q    P +   ++V             YR F   
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLV-----------RCYREF--- 167

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
                  +   ++  ++ F  L  ++EA ++  +   +GF P L   + L+  L +A   
Sbjct: 168 ----GGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMM 223

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
              +  Y  M E KI PDV  Y  +I+   + G V     +LS+M E+   P+ + YNA 
Sbjct: 224 GLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAF 282

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G C  G +D+A  ++  + ++   P+ HT+T+L+ G C+     +A+ +F  M  +G 
Sbjct: 283 IGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL 342

Query: 410 FPSVGMFNALIDGLCKAGELEKA--------------NLLFYKMEIG---------KNPT 446
            P+   + ALIDG  K G +E+A              N++ Y   IG         K  +
Sbjct: 343 NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           LF  +   G    D  +   +++ Y  +  + KA ++L ++      P   TY+ LI+G 
Sbjct: 403 LFNEMLMAGIE-PDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C   ++  A ++  ++   G++P+   YGTLI    +  R E A  +   M  NG  P  
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENA---IQG 622
             Y  L+   CR +K   A  L +    + I          I  + + GE++ A    + 
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +L      N+     YTI + G C  G   EAL+ F  ++E   I    +   +IH L K
Sbjct: 582 MLSSGIVPNN---VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRMKSVGYDL 740
            G    AM VFL  LK G +  P V  +L  SL+  F K+     A  L   M   G + 
Sbjct: 639 NGKTKEAMGVFLKFLKTGVV--PDV--FLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694

Query: 741 DACLY 745
           +  +Y
Sbjct: 695 NIVVY 699


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 172/622 (27%), Positives = 281/622 (45%), Gaps = 65/622 (10%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE------LRSGNVSVV 97
           P V  RFF WA ++   +    + +VI  +L  NG       + E      + +G + VV
Sbjct: 61  PVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVV 120

Query: 98  SD------------------------------VFFVLISG--YYKVGDCEKAL------- 118
           S                               VF+ ++S      V +C + L       
Sbjct: 121 SSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRD 180

Query: 119 -------ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
                  E +  M E    P V  YN +L+   +K +   AL + ++M  + C PN VT+
Sbjct: 181 NNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTY 240

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++L+NGLS SG+ E A +++ +M + G+  + +TY  +I G C+  + +EA RL  +M  
Sbjct: 241 NVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLS 300

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  P  V YN ++ G CK  RV +A  LL        +P L SY+ LI G  R     E
Sbjct: 301 RGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 360

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+  + ++    + P VV Y  +I GL   G +  AM+L  +M + G  PD + +   ++
Sbjct: 361 AFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVR 420

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           GFC +G L  A+ L  E+  R   P+   +   I G  + G    A  +  +M   G  P
Sbjct: 421 GFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPP 480

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            +  +N  IDGL K G L++A+ L  KM           L  G   V D  +  +++  +
Sbjct: 481 DLITYNVFIDGLHKLGNLKEASELVKKM-----------LYNG--LVPDHVTYTSIIHAH 527

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
             AG + KA  + +++   G  P ++TY  LI+ +   G +  A+  F E+  KG+ P+ 
Sbjct: 528 LMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNV 587

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TY  LINGL +V + + A+  F +M   G +P+   Y  L+  +C    +  A  L+  
Sbjct: 588 ITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKD 647

Query: 592 YLRDISGRDDESMKSIEEFLQK 613
            L      D  + +S+ + L K
Sbjct: 648 MLDREIQPDSCTHRSLLKHLNK 669



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 206/441 (46%), Gaps = 27/441 (6%)

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD-AMKLLSDMRERGIVPDTYCYNALIKGFC 354
           + KM  + + PDV     ++R L +     D A ++ + M E GI P    YN ++  FC
Sbjct: 154 FYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFC 213

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++ +A  L  ++      PN  T+ +L+ G+  +G ++ A++L   M + G   SV 
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++ LI G C+ G++E+A+ L  +M           LS+G   V    +  T++   C  
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEM-----------LSRGA--VPTVVTYNTIMYGLCKW 320

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A K+L  +     +PD+++YN+LI G+ ++GNI  A  LF EL+ + L P  VTY
Sbjct: 321 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTY 380

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL- 593
            TLI+GL R+   + A R+  +M ++G  P    + + +   C+     +A  L+ + L 
Sbjct: 381 NTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN 440

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           R +       +  I   L+ G+   A     EM  +     L  Y +++ GL + G +KE
Sbjct: 441 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 500

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A  +   ++    +    +   +IH     G+L  A  +FL  L  G    P V  Y + 
Sbjct: 501 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF--PSVVTYTVL 558

Query: 714 SLLFSKDNKKVHAYHLLCRMK 734
                     +H+Y +  R+K
Sbjct: 559 ----------IHSYAVRGRLK 569



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 37/322 (11%)

Query: 41  TKNPQVGFRFFIWAAKRKR--LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           T+   +G  F ++A  R R    S  + + +I  L +    D+  +  DE+         
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             F   + G+ K+G+   A E F +M     QPD + Y   +    +      A  +  E
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGK----TEVAIKMLD---------------------- 192
           M+     P+++T+++ I+GL K G     +E+  KML                       
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 193 ---------EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
                    EM  +GI P+  TYT++I       R   A   F +M + G  P+ + YNA
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+NG CK+R++D+A       +  G  P   +Y+ LI+       + EA   Y+ M + +
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652

Query: 304 IEPDVVLYGVMIRGLSEAGKVK 325
           I+PD   +  +++ L++  K+ 
Sbjct: 653 IQPDSCTHRSLLKHLNKDYKLH 674



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 90/218 (41%), Gaps = 41/218 (18%)

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC-KVGNINGALKLFKELQLKGLRP 529
           Y    L+ K   +  ++   G LPD+   N ++     +  NI+ A +++  +   G+ P
Sbjct: 141 YVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICP 200

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             VTY T+++   +    ++A ++  QM   GC+P+   Y  L                 
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL----------------- 243

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                            +      GE+E A   IQ +L +  +++ +   P    + G C
Sbjct: 244 -----------------VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDP---LIRGYC 283

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           + GQ++EA  +   ++   A+ T  +   +++GLCK G
Sbjct: 284 EKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWG 321


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 226/439 (51%), Gaps = 16/439 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G++ + +  KA+     +++F  QPDV+ YNA++N   +      A  V   M   +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ VT++++I  L   GK ++A+K+L+++      P   TYTI+I         DEA 
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M   G  PD   YN ++ G CK   VD A  ++R+ E  G  P + SY+ L+  L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +++E      KMF EK +P+VV Y ++I  L   GK+++AM LL  M+E+G+ PD 
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y+ LI  FC  G LD A      +     LP+   +  ++  +C+NG  D A ++F K
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           + + GC P+   +N +   L  +G+  +A +++   M  G +P              D+ 
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP--------------DEI 474

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  +M+   C  G++ +A+++L+ +      P ++TYN ++ GFCK   I  A+ + + +
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534

Query: 523 QLKGLRPDSVTYGTLINGL 541
              G RP+  TY  LI G+
Sbjct: 535 VGNGCRPNETTYTVLIEGI 553



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 15/409 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++  ++ LING  K  + + A ++LD M  +   P+  TY I+I  LC   + D A ++
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             ++    C P  + Y  L+        VDEAL L+      G  P + +Y+ +I G+ +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               D A+   R +  +  EPDV+ Y +++R L   GK ++  KL++ M      P+   
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI   C  G +++A +L   + ++   P+ +++  LI   CR G +D A +    M 
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
             GC P +  +N ++  LCK G+ ++A  +F K+ E+G +P              + +S 
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP--------------NSSSY 441

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            TM     ++G   +A  +++++  +G  PD ITYNS+I+  C+ G ++ A +L  +++ 
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
               P  VTY  ++ G  +  R EDA  +   M  NGC P+   Y  L+
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 212/444 (47%), Gaps = 14/444 (3%)

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R   ++ +L +   MV+    P+++  + LI G         A+++++ + + G  P+ F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+G C++NR D+A R+  +M+    SPD V YN ++   C   ++D AL +L   
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
             D   P + +Y+ LI+        DEA     +M    ++PD+  Y  +IRG+ + G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A +++ ++  +G  PD   YN L++   + G  ++   L  +++     PN  T++IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I  +CR+G +++A  L   M++ G  P    ++ LI   C+ G L+ A      M     
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM----- 394

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                 +S G   + D  +  T++   C  G   +A +I  +L E G  P+  +YN++ +
Sbjct: 395 ------ISDGC--LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
                G+   AL +  E+   G+ PD +TY ++I+ L R    ++AF +   M      P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSL 588
           S   Y  ++   C+  +   A ++
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINV 530



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 228/483 (47%), Gaps = 21/483 (4%)

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+     E+  L   M   G +PD +    L+ GF  LR + +A+ ++   EK G  P +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI+G  +  R D+A     +M  +   PD V Y +MI  L   GK+  A+K+L+ 
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +      P    Y  LI+     G +D+A  L  E+  R   P+  T+  +I GMC+ GM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLS 452
           VD A ++   +E  GC P V  +N L+  L   G+ E+   L  KM   K +P +     
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV----- 333

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   ++   C  G I +A  +L  + E G  PD  +Y+ LI  FC+ G +
Sbjct: 334 ---------VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A++  + +   G  PD V Y T++  L +  + + A  IFG++ + GC+P+ + Y ++
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444

Query: 573 MT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK 629
            +  WS   +    A  + L+ + +    D+ +  S I    ++G V+ A + L++M   
Sbjct: 445 FSALWSSGDK--IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                +  Y I L+G C+  ++++A+N+   +V         +   LI G+   GY   A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562

Query: 690 MDV 692
           M++
Sbjct: 563 MEL 565



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 187/375 (49%), Gaps = 4/375 (1%)

Query: 57  RKRLRSFASNSA----VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R R + F+ ++     +I  L      DL  + L++L S N       + +LI      G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             ++AL+   +M     +PD++ YN ++    ++ +   A  +   +    C P++++++
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +L+  L   GK E   K++ +M      PN  TY+I+I+ LC+  + +EA  L   MK+ 
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD  +Y+ L+  FC+  R+D A+  L +   DG +P + +Y+ ++  L +  + D+A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + K+ E    P+   Y  M   L  +G    A+ ++ +M   GI PD   YN++I  
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G++D+A  L V++   +  P+  T+ I++ G C+   ++DA  +   M   GC P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542

Query: 413 VGMFNALIDGLCKAG 427
              +  LI+G+  AG
Sbjct: 543 ETTYTVLIEGIGFAG 557



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 5/372 (1%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I+   K N  D   + LD +RS + S  +  + ++I      G  + AL+   
Sbjct: 159 FAYN-ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++   +CQP V  Y  ++     +     AL +  EM+     P++ T++ +I G+ K G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             + A +M+  +  +G  P+  +Y I++  L    + +E  +L  KM    C P+ V Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+   C+  +++EA+ LL+  ++ G  P   SY  LI    R  R D A  +   M  +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PD+V Y  ++  L + GK   A+++   + E G  P++  YN +       G  D+ 
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKI 455

Query: 363 RSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           R+L   +E+      P+  T+  +I  +CR GMVD+A +L   M      PSV  +N ++
Sbjct: 456 RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515

Query: 421 DGLCKAGELEKA 432
            G CKA  +E A
Sbjct: 516 LGFCKAHRIEDA 527



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 158/338 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I   +   G D   + +DE+ S  +      +  +I G  K G  ++A E    ++ 
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C+PDV  YN +L     +  +     +  +M    C PN+VT+S+LI  L + GK E 
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M ++G+ P+ ++Y  +I+  C+  R D A      M   GC PD V YN +L 
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLA 411

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  + D+AL +     + G  P   SY+ +   L+ +     A     +M    I+P
Sbjct: 412 TLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP 471

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D + Y  MI  L   G V +A +LL DMR     P    YN ++ GFC    ++ A ++ 
Sbjct: 472 DEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             +      PN  T+T+LI G+   G   +A +L N +
Sbjct: 532 ESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 58/465 (12%)

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R+  Y E+      M  +   PDV+L   +I+G      +  A++++  + + G  PD +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YNALI GFC +  +D A  +   +  +D  P+T T+ I+I  +C  G +D A K+ N++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
               C P+V  +  LI+                                           
Sbjct: 220 LSDNCQPTVITYTILIEA------------------------------------------ 237

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            TM+E     G + +A K++ ++   G  PD+ TYN++I G CK G ++ A ++ + L+L
Sbjct: 238 -TMLE-----GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG  PD ++Y  L+  L    + E+  ++  +M    C P+   Y  L+T  CR  K   
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351

Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM--DFKLNDFQLAPYTI 640
           A +L L+ +++     D       I  F ++G ++ AI+ L  M  D  L D  +  Y  
Sbjct: 352 AMNL-LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD--IVNYNT 408

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L  LC++G+  +AL IF  L E        S   +   L   G    A+ + L  + NG
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + P    Y        ++     A+ LL  M+S  +      Y
Sbjct: 469 --IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 240/474 (50%), Gaps = 20/474 (4%)

Query: 103  VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
             L+ G +       A++ F +M +     D   Y  ++N   + +   LA+ ++ +M K 
Sbjct: 1021 TLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KG 1079

Query: 163  NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            NC  ++ T+ ++I+ L K G T  A+ M  EM   GILP+   Y+ ++ GLC+  R  EA
Sbjct: 1080 NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEA 1139

Query: 223  YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
               F +M+  G S D   YN+L++G  +     E    L      GF P   +++ LIDG
Sbjct: 1140 LEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDG 1199

Query: 283  LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            L +  +  EA      M  +  EPD++ Y  ++ GL   G+++DA KL   + +RGI  +
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 1259

Query: 343  TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             + YN LI G+C    +D+A     E+  +   P+T T+  LI  +C++G V  AQKLF 
Sbjct: 1260 VFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFV 1319

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY---KMEIGKNPTLFLRLSQGGNRVH 459
            +M+  G F  +  +  L+DGLCK G LE+A  LF    K E   N  +F           
Sbjct: 1320 EMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF----------- 1368

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                   +++  C AG + +A+K   +++++G  PD I YN LING C  G ++ A+KL 
Sbjct: 1369 -----SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +++ KG  PDS+T+  +I  L + +   +A ++  +M     +P  AV   L+
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 256/544 (47%), Gaps = 48/544 (8%)

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            +D F  L++   K+G        + K+ +   QPD+Y  N +++     +       V+ 
Sbjct: 946  TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005

Query: 158  EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
              +K    P+ VT + L+ G+        A+++ DEMT++G+L +  TY I+I+GLC+  
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKAR 1065

Query: 218  RADEAYRLFLKMK----------------------------------DSGCSPDFVAYNA 243
            +   A +L  KMK                                   +G  PD V Y++
Sbjct: 1066 KTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125

Query: 244  LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            L++G C+  R+ EAL   +  E  G    + +Y+ LI GL RA  + E   +   M +  
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185

Query: 304  IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
              PD   + ++I GL + GKV +A ++L  MR +G  PD   YN L+ G C +G L+ A 
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245

Query: 364  SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
             L   +  R    N  ++ ILI G C++  +D+A + F +M   G  PS   +N LI  L
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305

Query: 424  CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            C++G +  A  LF +M+       FL+LS          +   +++  C  G + +A  +
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQ---FLKLS----------TYCVLLDGLCKNGHLEEAMDL 1352

Query: 484  LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
               + ++ + P+I  ++ L++G C+ G +  A K F E+   GL PD++ Y  LINGL  
Sbjct: 1353 FQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCN 1412

Query: 544  VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
                 +A ++  QM + GC P    +  ++    +  +   A  L L+ +R+ +   DE+
Sbjct: 1413 KGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL-LEEMRNRNFSPDEA 1471

Query: 604  MKSI 607
            + S+
Sbjct: 1472 VTSM 1475



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 236/517 (45%), Gaps = 88/517 (17%)

Query: 61   RSFASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
            R F  ++  ++ L+K     NG     Q  DE+    +   +  + +LI+G  K      
Sbjct: 1010 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGL 1069

Query: 117  ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
            A++   KMK  +C+ DV+ Y  +++   +  +   AL ++ EM+    LP++V +S L++
Sbjct: 1070 AIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 1128

Query: 177  GLSKSGKTEVAIKMLDEMTQRGIL-----------------------------------P 201
            GL + G+ + A++   EM  RGI                                    P
Sbjct: 1129 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 1188

Query: 202  NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
            + FT+TI+I GLC+  +  EA ++   M+  G  PD + YN L+NG C + ++++A  L 
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 1248

Query: 262  RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
             S    G    + SY+ LI+G  + ++ DEA+ ++ +M  + ++P  V Y  +I  L ++
Sbjct: 1249 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQS 1308

Query: 322  GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            G+V+ A KL  +M+  G       Y  L+ G C  G L++A  L   I K +  PN   F
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVF 1368

Query: 382  TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
            +IL+ GMCR G +++A K F+++ K G  P    +N LI+GLC  G L +A  L ++ME 
Sbjct: 1369 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME- 1427

Query: 442  GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                                                           E G LPD IT+N 
Sbjct: 1428 -----------------------------------------------EKGCLPDSITFNV 1440

Query: 502  LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            +I    K   I+ A++L +E++ +   PD      L+
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 268/576 (46%), Gaps = 51/576 (8%)

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            AIK+ D       +P   T+  +++ + ++      + ++ K+ D G  PD    N L++
Sbjct: 930  AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
              C LR V     +   F K GF P   + + L+ G++      +A   + +M ++ +  
Sbjct: 990  CCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLG 1049

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            D   YG++I GL +A K   A+KL   M+      D + Y  +I   C  G+  +A  + 
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMF 1108

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             E+     LP+   ++ L+ G+CR G + +A + F +ME  G    V  +N+LI GL +A
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168

Query: 427  GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            G             + K  T FL L        D  +   +++  C  G + +A +IL  
Sbjct: 1169 G-------------LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            +   G  PDI+TYN+L+NG C VG +  A KLF+ L  +G++ +  +Y  LING  +  +
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             ++AFR F +M   G  PS   Y +L+   C+  +   A  L+++            M++
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE------------MQT 1323

Query: 607  IEEFL-------------QKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
              +FL             + G +E A+   Q + + + K N   +  ++I L G+C+ G+
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPN---IEVFSILLDGMCRAGK 1380

Query: 651  VKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++EA   F  +   K  + P +     LI+GLC +G L  A+ +     + G +      
Sbjct: 1381 LEEAWKQFDEI--SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 1438

Query: 709  NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            N ++++LL  K+N+   A  LL  M++  +  D  +
Sbjct: 1439 NVIIQNLL--KENEIHEAIQLLEEMRNRNFSPDEAV 1472



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 149/287 (51%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F +LI G  K G   +A +    M+    +PD+  YN ++N          A  ++  +
Sbjct: 1192 TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESL 1251

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                   N+ ++++LING  K  K + A +  +EM  +G+ P+  TY  +I  LCQ  R 
Sbjct: 1252 ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRV 1311

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
              A +LF++M+  G       Y  LL+G CK   ++EA+ L +S +K    P +  +S L
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +DG+ RA + +EA+  + ++ +  +EPD + Y ++I GL   G + +A+KLL  M E+G 
Sbjct: 1372 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 1431

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
            +PD+  +N +I+       + +A  L  E+  R+  P+    ++L+C
Sbjct: 1432 LPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 1478



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 66   NSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            N  V S+LL    +    +  W+  DE+    +   +  + +LI+G    G   +A++  
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +M+E  C PD   +N ++    ++     A+ +  EM   N  P+    S+L+   S  
Sbjct: 1424 WQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFD 1483

Query: 182  GKTEVAIKMLDEMTQRGI 199
             +   A+  L    Q+G+
Sbjct: 1484 PQWHAALVSLPNALQKGV 1501


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 261/515 (50%), Gaps = 33/515 (6%)

Query: 59  RLRSFASNSAVISMLLK--------PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           RL   +S+   +++LL           GF  +   L    S N+      +  LI G   
Sbjct: 96  RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVT----YNTLIKGLCM 151

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV------KLNC 164
                +A   F +M++  C PDV  Y  ++          +AL ++ EM+      ++NC
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            PN++T++++++GL K G+ + A ++ +EM  +G++P+  +Y  +I G C   + +E+ R
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKR 271

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  +M D G  PD V +N L++  CK  +V EA  LL    + G VP L +Y+ LI+G  
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
                + A   +  M  +  EPDV+ Y V+I G S+  KV++AMKL ++M   G  P+  
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 391

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y++L+KG    G +D A+ L   +       N++T+ I + G+C+N  + +A KLF ++
Sbjct: 392 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 451

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKAS 463
           + +     +   N LIDGLCKAG+LE A  LF K+   G  P +               +
Sbjct: 452 KSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV--------------VT 497

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              M+  +C  G + KA  ++ ++  +G  PDIITYN+L+ GF +   +   ++L   + 
Sbjct: 498 YTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMA 557

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            K + PD++T   +++ L + ++ ++   +  + P
Sbjct: 558 QKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFP 592



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 249/511 (48%), Gaps = 63/511 (12%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F  M      P +  +N +L+   + + +    ++Y +M       +  T ++L+N
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L    +          + +RG  PN  TY  +I GLC  +R  EA RLFL+M+  GC+P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 237 DFV-----------------------------------------AYNALLNGFCKLRRVD 255
           D V                                          YN +++G CK+ R D
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA  L    +  G +P + SY+ LI G   A +++E+     +M ++ ++PD+V + V+I
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             L + GKV +A KLL  M E GIVPD   YN+LI+GFC +G L+ AR L V +  +   
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 352

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  ++ +LI G  +   V++A KL+N+M   G  P+V  +++L+ G+  AG+++ A  L
Sbjct: 353 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKL 412

Query: 436 FYKME-----------------IGKNPTLFLRLS-----QGGNRVHDKASLQTMVEQYCT 473
           F  M+                 + KN  LF  +      +  N   +  +L  +++  C 
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCK 472

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           AG +  A+++  +L+  G+ P+++TY  +I+GFC+ G ++ A  L ++++  G  PD +T
Sbjct: 473 AGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           Y TL+ G    ++ E+  ++  +M Q   +P
Sbjct: 533 YNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 260/552 (47%), Gaps = 58/552 (10%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A  A   F  M  S  +P   ++N LL+G  K++   +  +L       G      + + 
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++ L    R  E +A +  +      P++V Y  +I+GL    ++ +A +L   M++ G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEI------WKRDSLPNTHTFTILICGMCRNG 392
             PD   Y  LIKG C  G ++ A  L  E+      ++ +  PN  T+ I++ G+C+ G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
             D+A++LF +M+  G  PS+  +N+LI G C AG+ E++  L  +M           L 
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM-----------LD 278

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           QG     D  +   +++  C  G + +A K+L  + ESG +PD++TYNSLI GFC VG++
Sbjct: 279 QGLQP--DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           N A +LF  +  KG  PD ++Y  LING  +  + E+A +++ +M   G  P+   Y SL
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +              ++L      +G+ D++ K        G  EN+             
Sbjct: 397 LK------------GIFL------AGKVDDAKKLFSVMKAHGIAENSYT----------- 427

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
                Y I+L GLC++  + EA+ +F+ L      +   +   LI GLCK G L+ A ++
Sbjct: 428 -----YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWEL 482

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           F      G    P V  Y +    F ++ +   A  L+ +M++ G   D   Y    +L+
Sbjct: 483 FEKLSNEGH--EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITY---NTLM 537

Query: 753 PGPWNTREMENM 764
            G + + ++E +
Sbjct: 538 RGFYESNKLEEV 549



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 244/510 (47%), Gaps = 55/510 (10%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  ++ M++    P++ +F+ L++GL+K         + ++M   G+  ++ T  I+++
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC +NR  E +  F  +   G SP+ V YN L+ G C   R+ EA  L    +K G  P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKM------FEEKIEPDVVLYGVMIRGLSEAGKVK 325
            + +Y  LI GL      + A   +++M      +E   +P+V+ Y +++ GL + G+  
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +L  +M+ +G++P    YN+LI GFC  G  ++++ L  E+  +   P+  TF +LI
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C+ G V +A+KL   M ++G  P +  +N+LI+G C  G+L  A  LF  M      
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM------ 346

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                                        G  PD+I+YN LING
Sbjct: 347 ------------------------------------------PSKGCEPDVISYNVLING 364

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           + K   +  A+KL+ E+ L G RP+ +TY +L+ G+    + +DA ++F  M  +G   +
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLL 624
              Y   +   C+      A  L+ +        + E++   I+   + G++E A +   
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
           ++  + ++  +  YTI + G C++GQV +A
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 185/403 (45%), Gaps = 37/403 (9%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
              L+ + L+++    ++   +V  + +++ G  KVG  ++A + F +MK     P +  
Sbjct: 193 ALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIIS 252

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YN++++       +  +  +  EM+     P++VTF++LI+ L K GK   A K+L  M 
Sbjct: 253 YNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 312

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           + GI+P+  TY  +I G C +   + A  LF+ M   GC PD ++YN L+NG+ K  +V+
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 372

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV-- 313
           EA+ L       G  P + +Y  L+ G+F A + D+A   +  M    I  +   YG+  
Sbjct: 373 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 432

Query: 314 ---------------------------------MIRGLSEAGKVKDAMKLLSDMRERGIV 340
                                            +I GL +AGK++ A +L   +   G  
Sbjct: 433 DGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHE 492

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  +I GFC  G +D+A  L  ++      P+  T+  L+ G   +  +++  +L
Sbjct: 493 PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQL 552

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
            ++M +    P     + ++D L K  + ++   L  +  I K
Sbjct: 553 LHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 172/630 (27%), Positives = 288/630 (45%), Gaps = 17/630 (2%)

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           N  ++  L + + FD     L +L+S      +  F  LI  +    + E  L+      
Sbjct: 58  NETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN-- 115

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           E   +PD   YN  LN         L   ++ +MV    + ++ TF++LI  L K+ +  
Sbjct: 116 ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            AI ML+EM   G+ P++ T+T ++ G  +    + A ++  +M   GC    V+   L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NGFCK  RV+EAL  +    ++GF P   +++ L++G  R    ++A      M E+  +
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV  Y  +I G+ + G+ + A+++L  M  R   P+T  YN LI   C    ++ A  L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +  +  LP+  TF  LI G+C +   D A ++F +M+  GC P    ++ LID LC 
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
              L++A +L  +ME           S G  R  +     T+++  C +  I  A +I  
Sbjct: 416 ERRLKEALMLLKEME-----------SSGCAR--NAVVYNTLIDGLCKSRRIEDAEEIFD 462

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           Q+   G     +TYN+LI+G CK   +  A +L  ++ ++GL+PD  TY +L+    RV 
Sbjct: 463 QMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVG 522

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESM 604
             E A  I   M  NGC P    Y +L+   CR  +  +A  L     ++ I        
Sbjct: 523 DIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYN 582

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLVE 663
             I+    +   +  ++   EM  K +      + I   GLC   G ++EA++    ++E
Sbjct: 583 PVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLE 642

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              +   PS   L  GLC     D  +++ 
Sbjct: 643 KGILPEFPSFGFLAEGLCSLSMEDTLIELI 672



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G+ ++G+   AL+    M E    PDVY YN++++   +   F  A+ +  +M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   C PN VT++ LI+ L K  + E A  +   +  +G+LP+  T+  +I GLC     
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  +F +MK+ GC PD   Y+ L++  C  RR+ EAL LL+  E  G       Y+ L
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +++R ++A   + +M    +    V Y  +I GL +  +V++A +L+  M   G+
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + YN+L+  FC +G +++A  +   +      P+  T+  LI G+CR G VD A K
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L   ++  G   +   +N +I  L      ++   LF +M    +P              
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPP------------- 611

Query: 460 DKASLQTMVEQYCT-AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           D  + + +    C   G I +A    +++ E G LP+  ++  L  G C +   +  ++L
Sbjct: 612 DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIEL 671

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              +  K    +  T  ++I G  ++ +  DA    G
Sbjct: 672 INMVMEKAQMSERET--SMIRGFLKIRKFNDALANLG 706



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 246/550 (44%), Gaps = 22/550 (4%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L++S   +    +L ++   G +PN  T+  +I      +  +   ++     + G  PD
Sbjct: 65  LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKIL--ENELGFKPD 122

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              YN  LN   +  ++     L      +G V  + +++ LI  L +A +   A     
Sbjct: 123 TNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLE 182

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M    ++PD + +  +++G  E G +  A+K+   M   G +        L+ GFC  G
Sbjct: 183 EMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEG 242

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A    +E+ +    P+  TF  L+ G CR G V+DA  + + M + G  P V  +N
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYN 302

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +LI G+CK GE EKA  +  +M         LR         +  +  T++   C    I
Sbjct: 303 SLISGMCKLGEFEKAIEILQQM--------ILRECS-----PNTVTYNTLISALCKENEI 349

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A  +   L   G LPD+ T+N+LI G C   N + A+++F+E++ KG +PD  TY  L
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDI 596
           I+ L    R ++A  +  +M  +GC  +  VY +L+   C+ R+   A  ++ Q  L  +
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEM---DFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           S         I+   +   VE A Q + +M     K + F    Y   L   C+ G +++
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT---YNSLLTYFCRVGDIEK 526

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A +I   +          +   LI GLC+ G +D+A  +       G +L P   N +++
Sbjct: 527 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQ 586

Query: 714 SLLFSKDNKK 723
           +L   K  K+
Sbjct: 587 ALFMRKRTKE 596


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 270/564 (47%), Gaps = 21/564 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +++GY + G  E A      +      P+ Y Y  V+     +     ALAV  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C P    + +++    + G    A+++L+++  RG   +     +V++ +C     D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L   +   GC PD V+YNA+L G C  +R      L+    +    P + +++ LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R   ++  +    +M E    PD+ +Y  +I G+ + G ++ A ++L+ M   G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+  CYN L+KG C     ++   L  E++ +D   +  TF IL+   C+NG+VD   +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
             +M + GC P V  +  +I+G CK G +++A +L   M   G  P              
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP-------------- 435

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  S   +++  C+A     A  ++ Q+ + G   + IT+N+LIN  CK G +  A++L 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K++ + G  PD ++Y T+I+GL +  + ++A  +   M   G +P+  +Y S+ +   R 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + +    ++   ++D + R D  + +  I    ++GE E AI+ L  M         + 
Sbjct: 556 GRINKVIQMF-DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614

Query: 638 YTIWLIGLCQDGQVKEALNIFSVL 661
           YTI + GL  +G VKEA  + + L
Sbjct: 615 YTILIRGLASEGFVKEAQEMLTEL 638



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 255/546 (46%), Gaps = 17/546 (3%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ ++ G  ++G+ E A ++   +    + PN +TY  V+  LC   R  +A  +  +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             GC+P    Y+ +L   C+      A+ +L      G    +G+ + +++ +      D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA    R +     EPDVV Y  +++GL  A +     +L+ +M      P+   +N LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
              C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M   G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+V  +N L+ GLC A   E+   L  +M     P              D  +   +V+ 
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL-------------DDVTFNILVDF 376

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G I+ A+ L K +   G +P+
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +++Y  ++ GL   +R  DA  +  QM Q GC  +P  + +L+ + C++     A  L  
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 591 QYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           Q L +    D  S  ++ + L K G+ + A++ L  M  K        Y+     L ++G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++ + + +F  + +            +I  LCKRG  + A++   Y + +G +       
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 710 YLLRSL 715
            L+R L
Sbjct: 617 ILIRGL 622



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  L+ G       E+  E   +M +
Sbjct: 301 ATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M++  C+P+++T++ +ING  K G  + 
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDE 420

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  MT  G  PN  +YTIV+ GLC   R  +A  L  +M   GC  + + +N L+N
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + DEA      M  + + P
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G++   +++  ++++  I  D   YNA+I   C  G  ++A    
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+TILI G+   G V +AQ++  ++   G
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 209/478 (43%), Gaps = 19/478 (3%)

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++ G  RA + + A    R      + P+   Y  ++R L   G++ DA+ +L +M 
Sbjct: 93  YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG  P    Y+ +++  C  G    A  +  ++  R    +     +++  +C  G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           +A  L   +   GC P V  +NA++ GLC A        L  +M         +R++   
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM---------VRMACPP 260

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           N V    +  T++   C  GL  + +++L Q+ E G  PDI  Y ++I+G CK G++  A
Sbjct: 261 NIV----TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            ++   +   GL+P+ V Y TL+ GL   +R E+   +  +M    C      +  L+ +
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+         L  Q L      D  +  + I  F ++G ++ A+  L  M        
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              YTI L GLC   +  +A ++ S +++    + P +   LI+ LCK+G ++ A+++  
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             L NG    P + +Y        K  K   A  LL  M + G   +  +Y    S L
Sbjct: 497 QMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 139/276 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+  + + G  ++ +E   +M E  C PDV  Y  V+N   ++ L   A+ +   M
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 428

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C PN +++++++ GL  + +   A  ++ +M Q+G   N  T+  +I+ LC+    
Sbjct: 429 TACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLV 488

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M  +GCSPD ++Y+ +++G  K  + DEAL LL      G  P    YS +
Sbjct: 489 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
              L R  R ++    +  + +  I  D VLY  +I  L + G+ + A++ L+ M   G 
Sbjct: 549 ASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGC 608

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
           VP+   Y  LI+G    G + +A+ +  E+  + +L
Sbjct: 609 VPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 67/136 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    D   + L+ + +  +S  + ++  + S   + G   K ++ F  +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+     MV   C+PN  T+++LI GL+  G  
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 185 EVAIKMLDEMTQRGIL 200
           + A +ML E+  +G L
Sbjct: 629 KEAQEMLTELCSKGAL 644


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 293/637 (45%), Gaps = 52/637 (8%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY- 157
           DV++V I+    +G  +   +   +MKE               I FR+ +F++ +  Y  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKE-------------EGIVFRESIFMIIMKHYGK 159

Query: 158 -----EMVKLN--------CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                + ++L         C P   ++ L++  L      +VA  +  +M  +G+ P  F
Sbjct: 160 AGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVF 219

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T+ IV+  LC  N  D A  L   M   GC P+ + Y  L++   +  +V EAL LL   
Sbjct: 220 TFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM 279

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G +P + +++ +I GL +  +  +A     +M      PD + YG ++ GL   GK+
Sbjct: 280 FVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKL 339

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTI 383
            +A K+L  +      P+    N LI G+   G L +A+S   E        P+  T+ I
Sbjct: 340 NEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+C+ G +  A+ L N+M + GC P+V  +  L++GLCKAG LE+A L+ ++M   +
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS-AR 454

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             T+            +      ++   C    +H A  +L ++   G  PD+ TYNSLI
Sbjct: 455 GLTI------------NSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            G CKV  I+ A +LF  + L G   ++VTY TLI+ L R    + A  +   M   GCT
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQG 622
                Y  L+   C+         L+ Q + D  G D  S    I    + G+V+NA + 
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL-VECKAIVTPPSCV--KLIHG 679
           L +   +     +  Y   L GLC+ G++KEALN+F  L VE    V P +      I  
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG---VRPDAFTYNTFISW 679

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            CK G ++ A   F   ++NGF+      N L+ +LL
Sbjct: 680 QCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLL 716



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 257/556 (46%), Gaps = 55/556 (9%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYN 137
           F L  + L +++   +     +F +++  Y K G   +A+     M+  + C+P    Y+
Sbjct: 128 FKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYD 187

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            VL I        +A  V+Y+M+     P + TF +++  L    + + A  +L +MT+ 
Sbjct: 188 LVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKH 247

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G +PN   Y  +I  L Q N+  EA +L  +M   GC PD   +N +++G CK+ ++ +A
Sbjct: 248 GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDA 307

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA---------------------YAWY 296
             L+      GF P   +Y  L+ GL R  + +EA                     Y   
Sbjct: 308 TKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMS 367

Query: 297 RKMFEEK-----------IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            ++ E +            +PD+  Y +++ GL + G +  A  L+++M  RG  P+   
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  L+ G C  GLL++A  +  E+  R    N+  +  LIC +CR   V  A  L ++M 
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------EIGKNPTLFLRLSQGGNR 457
             GC P +  +N+LI GLCK   +++A  LF+ M         +  N  +   L +G  +
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547

Query: 458 --------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                           DK +   +++ +C  G I K  ++  Q+   G   D I+ N +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG CKVG ++ A +  ++   +G  PD VTY +++NGL +V R ++A  +F ++   G  
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667

Query: 564 PSPAVYKSLMTWSCRR 579
           P    Y + ++W C+ 
Sbjct: 668 PDAFTYNTFISWQCKE 683



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 255/564 (45%), Gaps = 49/564 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S   V+ +L+  N   +      ++ S  VS     F +++       + + A    
Sbjct: 182 TFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLL 241

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +  C P+  +Y  +++   +K     AL +  EM  + C+P++ TF+ +I+GL K 
Sbjct: 242 RDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKV 301

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------- 228
            K   A K++D M  RG  P+  TY  ++ GLC+I + +EA ++ +K             
Sbjct: 302 NKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLI 361

Query: 229 -------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                              M + G  PD   YN L++G CK   +  A  L+    + G 
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGC 421

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ L++GL +A   +EA     +M    +  + V+Y  +I  L    KV  A+ 
Sbjct: 422 EPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LLS+M  +G  PD + YN+LI G C +  +D+A  L   +    ++ N  T+  LI  + 
Sbjct: 482 LLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALL 541

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G    A  L N M   GC      +N LI   CK G +EK   L+ +M +        
Sbjct: 542 RRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMD------- 594

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
               G     D  S   M+   C  G +  A++ L      G +PDI+TYNS++NG CKV
Sbjct: 595 --GLGA----DTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G I  AL LF  LQ++G+RPD+ TY T I+   +     DA   F +  +NG  PS   +
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTW 708

Query: 570 K----SLMTWSCRRRKFSLAFSLW 589
                +L+  S +   F +   LW
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDELW 732


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 250/518 (48%), Gaps = 32/518 (6%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYK------VGDCEKALESFGKMKEFD-----CQP---- 131
           + LRSG V + +D    L            V D  +   +  K K++D     C+     
Sbjct: 156 ERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 215

Query: 132 ----DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
               ++Y  + ++N   R +   LA +   +++KL   PN +TFS LINGL   G+   A
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           ++++D M + G  P+  T   +++GLC   +  EA  L  KM + GC P+ V Y  +LN 
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 335

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK  +   A+ LLR  E+         YS +IDGL +    D A+  + +M  + I  +
Sbjct: 336 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 395

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y ++I G   AG+  D  KLL DM +R I P+   ++ LI  F   G L +A  L  
Sbjct: 396 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 455

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  R   P+T T+T LI G C+   +D A ++ + M   GC P++  FN LI+G CKA 
Sbjct: 456 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            ++    LF KM +                V D  +  T+++ +C  G ++ A ++  ++
Sbjct: 516 RIDDGLELFRKMSL-------------RGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 562

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                 P+I+TY  L++G C  G    AL++F++++   +  D   Y  +I+G+    + 
Sbjct: 563 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 622

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           +DA+ +F  +P  G  P    Y  ++   C++   S A
Sbjct: 623 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 227/457 (49%), Gaps = 13/457 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A  + GK+ +   +P+   ++ ++N    +     AL +   MV++   P+++T + L+N
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL  SGK   A+ ++D+M + G  PN  TY  V++ +C+  +   A  L  KM++     
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 359

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V Y+ +++G CK   +D A  L    E  G    + +Y+ LI G   A R+D+     
Sbjct: 360 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 419

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R M + KI P+VV + V+I    + GK+++A +L  +M  RGI PDT  Y +LI GFC  
Sbjct: 420 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 479

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             LD+A  +   +  +   PN  TF ILI G C+   +DD  +LF KM   G       +
Sbjct: 480 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 539

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N LI G C+ G+L  A  LF +M   K P              +  + + +++  C  G 
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPP-------------NIVTYKILLDGLCDNGE 586

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             KA +I  ++ +S    DI  YN +I+G C    ++ A  LF  L LKG++P   TY  
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +I GL +     +A  +F +M ++G  P    Y  L+
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 226/440 (51%), Gaps = 13/440 (2%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L++G    G   +A+    KM E+ CQP+   Y  VLN+  +     LA+ +  +M + 
Sbjct: 296 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 355

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N   + V +S++I+GL K G  + A  + +EM  +GI  N  TY I+I G C   R D+ 
Sbjct: 356 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 415

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +L   M     +P+ V ++ L++ F K  ++ EA  L +     G  P   +Y+ LIDG
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +    D+A      M  +  +P++  + ++I G  +A ++ D ++L   M  RG+V D
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 535

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN LI+GFC+LG L+ A+ L  E+  R   PN  T+ IL+ G+C NG  + A ++F 
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 595

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           K+EK+     +G++N +I G+C A +++ A  LF         +L L+  + G + ++  
Sbjct: 596 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC--------SLPLKGVKPGVKTYN-- 645

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               M+   C  G + +A  +  ++ E G+ PD  TYN LI      G+   ++KL +EL
Sbjct: 646 ---IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702

Query: 523 QLKGLRPDSVTYGTLINGLQ 542
           +  G   D+ T   +I+ L 
Sbjct: 703 KRCGFSVDASTIKMVIDMLS 722



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 280/592 (47%), Gaps = 51/592 (8%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +M+    LP ++ FS L + ++K+ + ++ + +  +M  +GI  N +T +I+I+
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  +   A+    K+   G  P+ + ++ L+NG C   RV EAL L+    + G  P
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 289

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L + + L++GL  + +  EA     KM E   +P+ V YG ++  + ++G+   AM+LL
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M ER I  D   Y+ +I G C  G LD A +L  E+  +    N  T+ ILI G C  
Sbjct: 350 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 409

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G  DD  KL   M K    P+V  F+ LID   K G+L +A  L  +M   G  P     
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP----- 464

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +  ++++ +C    + KA +++  +   G  P+I T+N LING+CK  
Sbjct: 465 ---------DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 515

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+  L+LF+++ L+G+  D+VTY TLI G   + +   A  +F +M      P+   YK
Sbjct: 516 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 575

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C                      + ES K++E F      E   +  +E+D  +
Sbjct: 576 ILLDGLCD---------------------NGESEKALEIF------EKIEKSKMELDIGI 608

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y I + G+C   +V +A ++F  L          +   +I GLCK+G L  A 
Sbjct: 609 -------YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 661

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +F    ++G        N L+R+ L   D  K  +  L+  +K  G+ +DA
Sbjct: 662 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK--SVKLIEELKRCGFSVDA 711



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 4/367 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K    D  +   +E+    ++     + +LI G+   G  +   +    M +
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  ++ +++   ++     A  ++ EM+     P+ +T++ LI+G  K    + 
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M+D M  +G  PN  T+ I+I+G C+ NR D+   LF KM   G   D V YN L+ 
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 544

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+L +++ A  L +        P + +Y  L+DGL      ++A   + K+ + K+E 
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 604

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+ +Y ++I G+  A KV DA  L   +  +G+ P    YN +I G C  G L +A  L 
Sbjct: 605 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 664

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +    P+  T+ ILI     +G    + KL  ++++ G          +ID L   
Sbjct: 665 RKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD- 723

Query: 427 GELEKAN 433
              +KAN
Sbjct: 724 ---DKAN 727



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 151/361 (41%), Gaps = 55/361 (15%)

Query: 390 RNGMVD----DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           R+G+VD    DA  LF  M  +   P+V  F+ L   + K  + +    L  +ME+    
Sbjct: 159 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK--- 215

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                        H+  +L  M+  +C    +  A+  + ++ + G  P+ IT+++LING
Sbjct: 216 ----------GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 265

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C  G ++ AL+L   +   G +PD +T  TL+NGL    +E +A  +  +M + GC P+
Sbjct: 266 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 325

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y  ++   C+  + +LA                       E L+K E         E
Sbjct: 326 AVTYGPVLNVMCKSGQTALAM----------------------ELLRKME---------E 354

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHGLCKRG 684
            + KL+  +   Y+I + GLC+ G +  A N+F+ + E K I T       LI G C  G
Sbjct: 355 RNIKLDAVK---YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAG 410

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
             D    +    +K    + P V  + +    F K+ K   A  L   M   G   D   
Sbjct: 411 RWDDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 468

Query: 745 Y 745
           Y
Sbjct: 469 Y 469


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 172/637 (27%), Positives = 289/637 (45%), Gaps = 103/637 (16%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V+ Y  ++    R     L  A    +VK       +TF+ L+ GL    +T  A+ +
Sbjct: 85  PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 191 -LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD---SGCSPDFVAYNALLN 246
            L  MT+   +P+ F+ TI++ GLC  NR+ EA  L   M D    G +PD V+Y  ++N
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 247 GF-----------------------------------CKLRRVDEALALLRSFEKDGFVP 271
           GF                                   CK + +D+A+ +L +  K+G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ ++ G   +++  EA  + +KM  + +EPDVV Y  ++  L + G+  +A K+ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y  L++G+   G L +  +L   + +    P+ H F ILIC   + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             VD+A  +F+KM + G  P+V  + A+I  LCK+G ++ A L F +M + G  P + + 
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 451 LSQGGNRVH--------DKAS-----------------LQTMVEQYCTAGLIHKAYKILM 485
            S     +H        DKA                    +++  +C  G + ++ K+  
Sbjct: 445 TSL----IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFD 500

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  P++ITY++LI+G+C  G ++ A KL   +   G++PD VTY TLING  RV 
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G +P+   Y  ++      R+ + A  L++               
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYV--------------- 605

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                   G  ++  Q            +L+ Y I L GLC++    EAL +F  L    
Sbjct: 606 --------GITKSGTQ-----------LELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +   +   +I  L K G  D A D+F+    NG +
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLV 683



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 286/615 (46%), Gaps = 68/615 (11%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR---GILPNKFTYTIVIS 211
           V   M +L+C+P++ + ++L+ GL    +++ A+++L  M      G  P+  +YT VI+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +   +D+AY  + +M D   SPD V Y++++   CK + +D+A+ +L +  K+G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ ++ G   +++  EA  + +KM  + +EPDVV Y  ++  L + G+  +A K+ 
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y  L++G+   G L +  +L   + +    P+ H F ILIC   + 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             VD+A  +F+KM + G  P+V  + A+I  LCK+G ++ A L F +M + G  P + + 
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
            S              ++   C      KA ++++++ + G   + I +NS+I+  CK G
Sbjct: 445 TS--------------LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  + KLF  +   G++P+ +TY TLI+G     + ++A ++   M   G  P    Y 
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +L+   CR  +   A +L+                  +E +  G   N I          
Sbjct: 551 TLINGYCRVSRMDDALALF------------------KEMVSSGVSPNII---------- 582

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y I L GL    +   A  ++  + +    +   +   ++HGLCK    D A+
Sbjct: 583 ------TYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKS 750
            +F         L  R  N ++ +LL  K  +   A  L     S G             
Sbjct: 637 RMFQNLCLTDLQLETRTFNIMIGALL--KVGRNDEAKDLFVAFSSNG------------- 681

Query: 751 LLPGPWNTREM-ENM 764
           L+P  W  R M EN+
Sbjct: 682 LVPNYWTYRLMAENI 696



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 271/592 (45%), Gaps = 56/592 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+G++K GD +KA  ++ +M +    PDV  Y++++    + Q    A+ V   MV
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMV 258

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K   +PN +T++ +++G   S + + AI  L +M   G+ P+  TY  ++  LC+  R+ 
Sbjct: 259 KNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRST 318

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  PD   Y  LL G+     + E  ALL    ++G  P    ++ LI
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               + ++ DEA   + KM +  + P+VV YG +I  L ++G V DAM     M + G+ 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y +LI   C     D+A  L +E+  R    NT  F  +I   C+ G V +++KL
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+ M + G  P+V  ++ LIDG C AG++++A  L   M  +G  P              
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP-------------- 544

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI---------------- 503
           D  +  T++  YC    +  A  +  ++  SG  P+IITYN ++                
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604

Query: 504 -------------------NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                              +G CK    + AL++F+ L L  L+ ++ T+  +I  L +V
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R ++A  +F     NG  P+   Y+ LM  +   +            + D     D  M
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPNYWTYR-LMAENIIGQGLLEELDQLFFSMEDNGCTVDSGM 723

Query: 605 KS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL-IGLCQDGQVKE 653
            +  + E LQ+GE+  A   L  +D K   F L   T  L I L   G+ +E
Sbjct: 724 LNFIVRELLQRGEITRAGTYLSMIDEK--HFSLEASTASLFIDLLSGGKYQE 773



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 182/381 (47%), Gaps = 10/381 (2%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L+ +A+  A++ M             LD +    +     VF +LI  Y K    ++A+ 
Sbjct: 343 LQGYATKGALVEM----------HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F KM++    P+V  Y AV+ I  +      A+  + +M+     PNI+ ++ LI+ L 
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
              K + A +++ EM  RGI  N   +  +I   C+  R  E+ +LF  M   G  P+ +
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            Y+ L++G+C   ++DEA  LL S    G  P   +Y+ LI+G  R  R D+A A +++M
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
               + P+++ Y ++++GL    +   A +L   + + G   +   YN ++ G C   L 
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D+A  +   +   D    T TF I+I  + + G  D+A+ LF      G  P+   +  +
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 420 IDGLCKAGELEKANLLFYKME 440
            + +   G LE+ + LF+ ME
Sbjct: 693 AENIIGQGLLEELDQLFFSME 713



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/573 (25%), Positives = 259/573 (45%), Gaps = 47/573 (8%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P    Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL---SDMRERGIVPDTYCYNALIKGFCDLG 357
           E    PDV    ++++GL +  + ++A++LL   +D R  G  PD   Y  +I GF   G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A S   E+  R   P+  T++ +I  +C+   +D A ++   M K G  P+   +N
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVH----------- 459
           +++ G C + + ++A     KM   G  P      +L   L + G               
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 460 ----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D A+  T+++ Y T G + + + +L  +  +G  PD   +N LI  + K   ++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + +F +++  GL P+ VTYG +I  L +    +DA   F QM   G TP+  VY SL+  
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 576 SCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEV---ENAIQGLLEMDFKLN 631
            C   K+  A  L L+ L R I          I    ++G V   E     ++ +  K N
Sbjct: 451 LCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPN 510

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
              +  Y+  + G C  G++ EA  + S +    ++   P CV    LI+G C+   +D 
Sbjct: 511 ---VITYSTLIDGYCLAGKMDEATKLLSSMF---SVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 689 AMDVFLYTLKNGFILRPRVCNY--LLRSLLFSK 719
           A+ +F   + +G  + P +  Y  +L+ L  ++
Sbjct: 565 ALALFKEMVSSG--VSPNIITYNIILQGLFHTR 595



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 35/263 (13%)

Query: 485 MQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           M  A +G + P + TY  LI   C+ G ++        +  KG R +++T+  L+ GL  
Sbjct: 75  MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134

Query: 544 VDREEDAFRI-FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
             R  DA  I   +M +  C P       L+   C   +   A  L      D  G    
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGG---- 190

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                      G   + +                 YT  + G  ++G   +A + +  ++
Sbjct: 191 -----------GSAPDVVS----------------YTTVINGFFKEGDSDKAYSTYHEML 223

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           + +      +   +I  LCK   +D AM+V    +KNG +      N +L     S+  K
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
           +  A   L +M+S G + D   Y
Sbjct: 284 E--AIGFLKKMRSDGVEPDVVTY 304


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 149/492 (30%), Positives = 243/492 (49%), Gaps = 19/492 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYN 137
           F    + LD +R     VV   F V+   Y K    EKA+  F +M  EF+C+  V  +N
Sbjct: 76  FKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFN 135

Query: 138 AVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           +VLN+  ++ LF  AL  Y  ++    +N  PN++TF+L+I  + K G  + A++M  +M
Sbjct: 136 SVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDM 195

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
                 P+ +TY  ++ GLC+ +R DEA  L  +M+  GC P  V +N L+NG CK   +
Sbjct: 196 PVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDL 255

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                L+ +    G  P   +Y+ LI GL    + ++A +   +M   K  P+VV YG +
Sbjct: 256 ARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTI 315

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL + G+  D  ++L+ M ERG   + Y Y+ALI G    G   +A  L  E+  ++ 
Sbjct: 316 INGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKEC 375

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             NT  ++ +I G+CR+G  D+A ++ ++M    C P+   +++L+ G  +AG   KA  
Sbjct: 376 ELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIE 435

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           ++  M                N   ++     ++   C  G + +A  +  Q+   G  P
Sbjct: 436 MWKDM-------------AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKP 482

Query: 495 DIITYNSLINGFCKVGNINGALKLFKEL--QLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           D++ Y S+ING    G +  AL+L+ E+  Q    +PD VTY  L+N L +      A  
Sbjct: 483 DVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAID 542

Query: 553 IFGQMPQNGCTP 564
           +   M   GC P
Sbjct: 543 LLNSMLDRGCDP 554



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 254/551 (46%), Gaps = 72/551 (13%)

Query: 61  RSFASNSAVISMLLKPNGF----DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R+  S ++V++++++   F    + Y   +   +  N+S     F ++I    KVG  + 
Sbjct: 129 RTVKSFNSVLNVIIQEGLFYRALEFYNHVIGA-KGVNISPNVLTFNLVIKTMCKVGLVDD 187

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++ F  M    CQPDVY Y  +++   +      A+++  EM    C P+ VTF++LIN
Sbjct: 188 AVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 247

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K G      K++D M  +G  PN+ TY  +I GLC   + ++A  L  +M  S C P
Sbjct: 248 GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 307

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V Y  ++NG  K  R  +   +L   E+ G+      YS LI GLF+  +  EA   +
Sbjct: 308 NVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLF 367

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           ++M  ++ E + ++Y  +I GL   GK  +A+++LS+M      P+ Y Y++L+KGF + 
Sbjct: 368 KEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEA 427

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G   +A  +  ++ K +   N   +++LI G+C++G V +A  ++ +M   GC P V  +
Sbjct: 428 GNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAY 487

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            ++I+GL  AG +E A                               LQ   E  C    
Sbjct: 488 GSMINGLSNAGLVEDA-------------------------------LQLYNEMLCQ--- 513

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
                       E  + PD++TYN L+N  CK  +I+ A+ L   +  +G  PD VT   
Sbjct: 514 ------------EPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCII 561

Query: 537 LINGL-QRVDREED--------------------AFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +  L +++D  +D                    A +I   M Q    P P+ +  ++  
Sbjct: 562 FLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVED 621

Query: 576 SCRRRKFSLAF 586
            C  +K   A 
Sbjct: 622 LCNPKKVQAAI 632



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 258/602 (42%), Gaps = 70/602 (11%)

Query: 161 KLNCLPNIVT---FSLLINGLSKSGKTEVAIKMLDEMT-----QRGILP-NKFTYTIVIS 211
           ++ C   +V    F ++     K+   E A+ + D M      +R +   N     I+  
Sbjct: 85  RMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQE 144

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GL    RA E Y   +  K    SP+ + +N ++   CK+  VD+A+ + R        P
Sbjct: 145 GL--FYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQP 202

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y  L+DGL +A R DEA +   +M  +   P  V + V+I GL + G +    KL+
Sbjct: 203 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLV 262

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  +G  P+   YN LI G C  G L++A SL   +     +PN  T+  +I G+ + 
Sbjct: 263 DNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 322

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G   D  ++   ME+ G   +  +++ALI GL K G+ ++A  LF +M + +     +  
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S              +++  C  G   +A ++L ++  +   P+  TY+SL+ GF + GN
Sbjct: 383 S-------------AVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGN 429

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A++++K++       + V Y  LI+GL +  + ++A  ++ QM   GC P    Y S
Sbjct: 430 GHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGS 489

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           +                                  I      G VE+A+Q   EM  +  
Sbjct: 490 M----------------------------------INGLSNAGLVEDALQLYNEMLCQEP 515

Query: 632 DFQ--LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           D Q  +  Y I L  LC+   +  A+++ + +++        +C+  +  L  R  LD  
Sbjct: 516 DSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL--REKLDPP 573

Query: 690 MD--VFLYTLKNGFILRPRV------CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            D   FL  L    + R RV         +L+ LL  K +        LC  K V   + 
Sbjct: 574 QDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633

Query: 742 AC 743
            C
Sbjct: 634 KC 635


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 270/593 (45%), Gaps = 54/593 (9%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           ++ A +  L      D    TL E+R   V+         I  + + G  ++AL++F + 
Sbjct: 57  AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116

Query: 125 K-EFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           + +  C  P V +YN +L+   R+ L    + VY  M K    PN+ T++LLI  L ++ 
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQND 176

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           +   A +MLDEM ++G  P++ ++T +IS LC+++R DEA  +  +M   G S     YN
Sbjct: 177 RVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YN 231

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           A+++  C   R+ E   ++      G  P   +Y+ ++    +A+    A A   +M  E
Sbjct: 232 AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTE 291

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+V  + V+++G  + GKV DA+ + + M   G  P T  YN LI+G C +G L +A
Sbjct: 292 GCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRA 351

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   + K D LP+  T++ LI G  + G +D A  ++N M  AGC P+V ++  ++D 
Sbjct: 352 LFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDV 411

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCK    ++A  L  KM +   P              +  +  T++   C  G   +A  
Sbjct: 412 LCKKVMFDQAENLIDKMSLENCPP-------------NTLTFNTLIRSLCDLGRAGRALN 458

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +   +   G  P+  TYN L++G  + GN   AL++  E+   G     V+Y T I+GL 
Sbjct: 459 VFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLC 518

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           ++   ++A  + G+M   G  P    + ++                              
Sbjct: 519 QMRMIKEAMILLGRMIIQGIQPDAFTFNAI------------------------------ 548

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
               I  + ++G V  A   L  MD       +  YT  + GLC   ++ +A+
Sbjct: 549 ----IHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAM 597



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 209/489 (42%), Gaps = 52/489 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P    Y  ++  L + N       ++  M+ +G  P+   YN L+   C+  RV  A  +
Sbjct: 125 PTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRM 184

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    + G  P   S++ +I  L +  R DEA    R +  E + P    Y  ++  L  
Sbjct: 185 LDEMARKGCRPDEVSHTTIISALCKLDRLDEA----RGILAE-MTPVGASYNAVVHALCG 239

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++++   ++ +M  RG+ PDT  Y +++  FC    L  A ++   +     +PN  T
Sbjct: 240 QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQT 299

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           FT+L+ G   +G V DA  ++N M   G  PS   +N LI GLC  G+L++A  +F  M 
Sbjct: 300 FTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM- 358

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            GK+  L            D  +  T+++ +  AG +  A  I   +  +G  P+++ Y 
Sbjct: 359 -GKSDCL-----------PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYT 406

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           ++++  CK    + A  L  ++ L+   P+++T+ TLI  L  + R   A  +F  M + 
Sbjct: 407 NMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRY 466

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC P+   Y  L+                                      ++G  E+A+
Sbjct: 467 GCPPNDRTYNELL----------------------------------HGLFREGNCEDAL 492

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           + L EM     +  L  Y   + GLCQ   +KEA+ +   ++         +   +IH  
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552

Query: 681 CKRGYLDLA 689
           CK G +  A
Sbjct: 553 CKEGNVRAA 561



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 200/459 (43%), Gaps = 20/459 (4%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S++ +IS L K +  D     L E+    V    +     + G +++    +      +M
Sbjct: 199 SHTTIISALCKLDRLDEARGILAEMTP--VGASYNAVVHALCGQFRM---REVFLVVDEM 253

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                +PD   Y +++    + +   +A A+   MV   C+PN+ TF++L+ G    GK 
Sbjct: 254 VHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKV 313

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A+ M + M   G  P+  +Y ++I GLC I     A  +F  M  S C PD   Y+ L
Sbjct: 314 HDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTL 373

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++GF K   +D A+++       G  P +  Y+ ++D L +   +D+A     KM  E  
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENC 433

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+ + +  +IR L + G+   A+ +   MR  G  P+   YN L+ G    G  + A  
Sbjct: 434 PPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALR 493

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  E+       +  ++   I G+C+  M+ +A  L  +M   G  P    FNA+I   C
Sbjct: 494 MLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYC 553

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K G +  A  +  +M+    P              +  +  +++   C+   +  A   L
Sbjct: 554 KEGNVRAAAWMLGRMDAVNCP-------------RNIVAYTSLMSGLCSQHKLDDAMVYL 600

Query: 485 MQLAESGNLPDIITYNSLING-FCKVGNINGALKLFKEL 522
           +++   G  P+  T+N L+ G F  +G I G + L   +
Sbjct: 601 LKMLYEGICPNEATWNVLVRGIFTHLGTI-GPMHLIDHI 638



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 190/466 (40%), Gaps = 57/466 (12%)

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGF-----VPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           AL+   C   R   A   L++F +         P +  Y+ L+D L R          Y 
Sbjct: 92  ALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYD 151

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M +  +EP+V  Y ++I+ L +  +V  A ++L +M  +G  PD   +  +I   C L 
Sbjct: 152 NMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLD 211

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+AR +  E+      P   ++  ++  +C    + +   + ++M   G  P    + 
Sbjct: 212 RLDEARGILAEM-----TPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYT 266

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +++   CKA EL  A  +  +M           +++G   V +  +   +V+ +   G +
Sbjct: 267 SIVGAFCKARELRMACAILARM-----------VTEGC--VPNVQTFTVLVKGFFDDGKV 313

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           H A  +   +   G  P  I+YN LI G C +G++  AL +F  +      PD  TY TL
Sbjct: 314 HDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTL 373

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+G  +    + A  I+  M   GC P+  VY +++   C++  F  A            
Sbjct: 374 IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQA------------ 421

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                     E  + K  +EN     L             +   +  LC  G+   ALN+
Sbjct: 422 ----------ENLIDKMSLENCPPNTLT------------FNTLIRSLCDLGRAGRALNV 459

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           F  +          +  +L+HGL + G  + A+ +    L +GF L
Sbjct: 460 FHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFEL 505



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 148/352 (42%), Gaps = 23/352 (6%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           + A ++     G LD  +    E+  R            IC   R G  D A K F +  
Sbjct: 58  HEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRAR 117

Query: 406 KA-GCF-PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
              GC  P+V ++N L+D L +   +     ++  M + G  P ++              
Sbjct: 118 HDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVY-------------- 163

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++  C    +  A ++L ++A  G  PD +++ ++I+  CK+  ++ A  +  E+
Sbjct: 164 TYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM 223

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
                 P   +Y  +++ L    R  + F +  +M   G  P    Y S++   C+ R+ 
Sbjct: 224 T-----PVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAREL 278

Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
            +A ++  + + +    + ++    ++ F   G+V +A+     M  +        Y + 
Sbjct: 279 RMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVL 338

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           + GLC  G +K AL +FS + +   +    +   LI G  K G LD+AM ++
Sbjct: 339 IRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIW 390


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/627 (26%), Positives = 298/627 (47%), Gaps = 59/627 (9%)

Query: 103 VLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           ++   Y K    ++AL+ F +M E F CQP +  YN++LN       +  A + +     
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 117

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           +   PN+ T+++LI    +  + + A ++L+ M  +G  P+ F+Y  +I+ L +     +
Sbjct: 118 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSD 177

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLI 280
           A +LF +M + G +PD   YN L++GF K   +  A  +     K   V P + SY+ +I
Sbjct: 178 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 237

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL +  ++DE++  + +M + +   D+  Y  +I GL  +G +  A ++  +M E G+ 
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWK---RDSLPNTHTFTILICGMCRNGMVDDA 397
           PD   YN ++ G+   G +++     +E+WK   ++      ++ ILI G+  N  VD+A
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEEC----LELWKVMEKEGCRTVVSYNILIRGLFENAKVDEA 353

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             ++  + +  C      +  L+ GLCK G L KA  +  + E G+              
Sbjct: 354 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL----------- 402

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  +M+   C  G + +   +L Q+ + G  P+    N++INGF +   +  AL+
Sbjct: 403 --DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALR 460

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            F  +  KG  P  VTY TLINGL + +R  +A+ +  +M Q G  P+   Y  LM   C
Sbjct: 461 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLC 520

Query: 578 RRRKFSLAFSLWLQYLR-----DI------------SGRDDESMKSIEEFLQKGEVENAI 620
           + +K  +A +LW Q L      D+            SG+ +++++   E  Q+  V N +
Sbjct: 521 QGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLV 580

Query: 621 --QGLLEMDFKLNDFQLA-----------------PYTIWLIGLCQDGQVKEALNIFSVL 661
               L+E  +K+ DF+ A                  Y I L GLC   ++ +A+   +  
Sbjct: 581 THNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDA 640

Query: 662 VECKAIVTPPSCVKLIHG-LCKRGYLD 687
           V+   + T  +   L+ G L  +GY++
Sbjct: 641 VDRGVLPTAITWNILVQGYLALKGYME 667



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/491 (30%), Positives = 246/491 (50%), Gaps = 19/491 (3%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    LI+   K G    AL+ F +M E    PDV  YN +++  F+K   L A  ++
Sbjct: 158 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 217

Query: 157 YEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
             ++K  +  PNI +++++INGL K GK + + ++   M +     + +TY+ +I GLC 
Sbjct: 218 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 277

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               D A R++ +M ++G SPD V YN +LNG+ +  R++E L L +  EK+G    + S
Sbjct: 278 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVS 336

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI GLF   + DEA + +  + E+    D + YGV++ GL + G +  A+ +L +  
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
                 DT+ Y+++I G C  G LD+   +  ++ K    PN +    +I G  R   ++
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA + F  M   GCFP+V  +N LI+GL KA    +A  L  +M + G  P +       
Sbjct: 457 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI------ 510

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +   ++   C    +  A  +  Q  E G  PD+  +N +I+G C  G +  
Sbjct: 511 --------TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL+L+ E++ +   P+ VT+ TL+ G  +V   E A +I+  + Q G  P    Y   + 
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622

Query: 575 WSCRRRKFSLA 585
             C   + S A
Sbjct: 623 GLCSCHRISDA 633



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 241/553 (43%), Gaps = 92/553 (16%)

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEA 257
           IL   F   +V     + +  D+A  +F +M +  GC P   +YN+LLN   +  + DEA
Sbjct: 49  ILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 108

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
            +    FE  G  P L +Y+ LI    R K++D+A      M+ +   PDV  YG +I  
Sbjct: 109 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINS 168

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF------------------------ 353
           L++ G + DA+KL  +M ERG+ PD  CYN LI GF                        
Sbjct: 169 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 228

Query: 354 ------------CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
                       C  G  D++  +   + K +   + +T++ LI G+C +G +D A +++
Sbjct: 229 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 288

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT-----LFLRLSQGGN 456
            +M + G  P V ++N +++G  +AG +E+   L+  ME     T     + +R      
Sbjct: 289 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENA 348

Query: 457 RVHDKASLQTM----------------VEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +V +  S+  +                V   C  G ++KA  IL +        D   Y+
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           S+ING C+ G ++    +  ++   G +P+      +ING  R  + EDA R FG M   
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC P+   Y +L+    +  +FS A++L                  ++E LQKG   N I
Sbjct: 469 GCFPTVVTYNTLINGLSKAERFSEAYAL------------------VKEMLQKGWKPNMI 510

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
                            Y++ + GLCQ  ++  ALN++   +E            +IHGL
Sbjct: 511 T----------------YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554

Query: 681 CKRGYLDLAMDVF 693
           C  G ++ A+ ++
Sbjct: 555 CSSGKVEDALQLY 567



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W+ ++  + G  +VVS  + +LI G ++    ++A+  +  + E DC  D   Y  +++ 
Sbjct: 323 WKVME--KEGCRTVVS--YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHG 378

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +      AL++  E        +   +S +INGL + G+ +    +LD+MT+ G  PN
Sbjct: 379 LCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN 438

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            +    VI+G  + ++ ++A R F  M   GC P  V YN L+NG  K  R  EA AL++
Sbjct: 439 PYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVK 498

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              + G+ P + +YS L++GL + K+ D A   + +  E+  +PDV ++ ++I GL  +G
Sbjct: 499 EMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSG 558

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           KV+DA++L S+M++R  VP+   +N L++GF  +   ++A  +   I +    P+  ++ 
Sbjct: 559 KVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYN 618

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG-LCKAGELEKANLLFYKMEI 441
           I + G+C    + DA    N     G  P+   +N L+ G L   G +E    +F    +
Sbjct: 619 ITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEP---VFVPASM 675

Query: 442 GKNPTLFLR 450
             NP + +R
Sbjct: 676 KGNPGMQMR 684



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 17/458 (3%)

Query: 290 DEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           D+A   +++M E    +P +  Y  ++  L E+ K  +A          G+ P+   YN 
Sbjct: 70  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LIK  C     D+A+ L   +W +   P+  ++  LI  + +NG + DA KLF++M + G
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  +N LIDG  K G++  A+             ++ RL +G +   +  S   M+
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNAS------------EIWERLLKGPSVYPNIPSYNVMI 237

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G   ++++I  ++ ++    D+ TY++LI+G C  GN++GA +++KE+   G+ 
Sbjct: 238 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 297

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD V Y T++NG  R  R E+   ++  M + GC  +   Y  L+       K   A S+
Sbjct: 298 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 356

Query: 589 W-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           W L   +D           +    + G +  A+  L E +    D     Y+  + GLC+
Sbjct: 357 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 416

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           +G++ E   +   + +      P  C  +I+G  +   L+ A+  F   +  G       
Sbjct: 417 EGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            N L+  L  SK  +   AY L+  M   G+  +   Y
Sbjct: 477 YNTLINGL--SKAERFSEAYALVKEMLQKGWKPNMITY 512



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 1/261 (0%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R  L +FA  S++I+ L +    D     LD++          V   +I+G+ +    E 
Sbjct: 399 RGDLDTFAY-SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLED 457

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  FG M    C P V  YN ++N   + + F  A A+  EM++    PN++T+SLL+N
Sbjct: 458 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMN 517

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL +  K ++A+ +  +  ++G  P+   + I+I GLC   + ++A +L+ +MK   C P
Sbjct: 518 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVP 577

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V +N L+ GF K+R  + A  +     + G  P + SY+  + GL    R  +A  + 
Sbjct: 578 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFL 637

Query: 297 RKMFEEKIEPDVVLYGVMIRG 317
               +  + P  + + ++++G
Sbjct: 638 NDAVDRGVLPTAITWNILVQG 658


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 268/545 (49%), Gaps = 51/545 (9%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           + L +F +M      P V   N VL +      +    AVY +M++L   P+I T++ L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 176 NGLSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +   K+G+ + A+ +L +M  R  G LPN  TY +VI+GL +    ++A +L   M+ S 
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK 296

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            +  F  YN L+ G      V++A ALL   E +G VP + +Y+ LIDGLF+    + A 
Sbjct: 297 KASAFT-YNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M  + + PD++ Y  +I G  +AG +K A+ L  D++  G+ P    YN LI G+
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC--RN-------------------- 391
           C LG L+ AR L+ E+ + D LP+  T+TIL+ G C  RN                    
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDC 475

Query: 392 -------------GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
                        G + +A +L  +M   G       +N LIDGLCK G L+ A +L+ K
Sbjct: 476 FAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMK 535

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M      T  LRL        D  +   ++  +C  G + +A  I   +  SG  P ++T
Sbjct: 536 MV-----TDGLRL--------DCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVT 582

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y   I+ +C+ GN+  A   F+++  +G+ P+ VTY  L++ L R+ R E A++ F +M 
Sbjct: 583 YTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEML 642

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + G  P+   Y  L+  SC+   +  A  L+ +  +     D  +  ++ +   +G + +
Sbjct: 643 ERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYD 702

Query: 619 AIQGL 623
           A+Q L
Sbjct: 703 AVQYL 707



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 250/565 (44%), Gaps = 62/565 (10%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L+ + EM +    P +   + ++  L  + + +    +  +M Q G+ P+ FTY  ++  
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 213 LCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLR----SFEK 266
            C+  R D+A  L   M  + +GC P+ V YN ++NG  +   +++A  L+     S + 
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA 298

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
             F     +Y+ LI GL      ++A A   +M  E I P VV Y  +I GL + G  + 
Sbjct: 299 SAF-----TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEA 353

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A     +MR +G++PD   YN+LI G+C  G L QA  L  ++ +    P   T+ ILI 
Sbjct: 354 AQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G CR G ++ A++L  +M +  C P V  +  L++G C    L    + F +M   G  P
Sbjct: 414 GYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             F              +  T +    T G I  A+++  ++   G   D +TYN LI+G
Sbjct: 474 DCF--------------AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDG 519

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK G++  A  L+ ++   GLR D VTY  LI+      R  +A  IF  M  +G +PS
Sbjct: 520 LCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS 579

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y   +   CRR    LA+  W +             K +EE ++  EV         
Sbjct: 580 VVTYTIFIHTYCRRGNLYLAYG-WFR-------------KMLEEGVEPNEVT-------- 617

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                       Y + +  LC+ G+ + A   F  ++E   +    +   LI G CK G 
Sbjct: 618 ------------YNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGN 665

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNY 710
              A+ ++    + G  + P  C +
Sbjct: 666 WVHAIRLYCEMHQKG--IHPDHCTH 688



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 213/493 (43%), Gaps = 54/493 (10%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           + L+  +   + G  P +   +C++  L  A R+D+  A Y  M +  +EP +  Y  ++
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 316 RGLSEAGKVKDAMKLLSDMRER--GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
               +AG++  A+ LL DM  R  G +P+   YN +I G    G L++A  L V+I +  
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLS 295

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
              +  T+  LI G+     V+ A  L  +ME  G  P+V  +N LIDGL K G  E A 
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           + F +M                                                   G L
Sbjct: 356 VKFDEMR------------------------------------------------AKGLL 367

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD+ITYNSLING+CK GN+  AL LF +L+  GL P  +TY  LI+G  R+   E A R+
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
             +M +  C P    Y  LM  SC  R  ++    + + L      D  +  + I   L 
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G + NA Q   EM  +        Y + + GLC+ G +K+A  ++  +V     +   +
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              LIH  C+RG L  A ++F   + +G  L P V  Y +    + +      AY    +
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASG--LSPSVVTYTIFIHTYCRRGNLYLAYGWFRK 605

Query: 733 MKSVGYDLDACLY 745
           M   G + +   Y
Sbjct: 606 MLEEGVEPNEVTY 618



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 232/527 (44%), Gaps = 27/527 (5%)

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M   G +P     N +L       R D+  A+     + G  P + +Y+ L+D   +
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 286 AKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           A R D+A A  + M        P+ V Y V+I GL+  G+++ A +L+  MR        
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA-SA 300

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + YN LI G      +++A +L +E+     +P   T+  LI G+ + G  + AQ  F++
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           M   G  P +  +N+LI+G CKAG L++A  LF  ++  G  PT+               
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVL-------------- 406

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++ YC  G +  A ++  ++ E   LPD+ TY  L+NG C V N+      F E+
Sbjct: 407 TYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEM 466

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KGL PD   Y T I+    +    +AF++  +M   G +     Y  L+   C+    
Sbjct: 467 LSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSL 526

Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG---EVENAIQGLLEMDFKLNDFQLAPY 638
             A+ LW++ + D    D  +    I    ++G   E +N   G++      +   +  Y
Sbjct: 527 KDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPS---VVTY 583

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           TI++   C+ G +  A   F  ++E        +   L+H LC+ G  + A   F   L+
Sbjct: 584 TIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLE 643

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G +  P    Y L      K+   VHA  L C M   G   D C +
Sbjct: 644 RGLV--PNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTH 688



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 170/381 (44%), Gaps = 1/381 (0%)

Query: 23  EPLLP-FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           E ++P  ++  T+   + KT N +     F     +  L    + +++I+   K      
Sbjct: 329 EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
                 +L+   +      + +LI GY ++GD E A     +M E DC PDV  Y  ++N
Sbjct: 389 ALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMN 448

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
            +   +   +    + EM+     P+   ++  I+     G    A ++ +EM  RGI  
Sbjct: 449 GSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISS 508

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           +  TY ++I GLC+     +AY L++KM   G   D V Y  L++  C+  R+ EA  + 
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
                 G  P + +Y+  I    R      AY W+RKM EE +EP+ V Y V++  L   
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+ + A +   +M ERG+VP+ Y Y  LI G C  G    A  L  E+ ++   P+  T 
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTH 688

Query: 382 TILICGMCRNGMVDDAQKLFN 402
             L  G     M D  Q L N
Sbjct: 689 NALFKGFGEGHMYDAVQYLEN 709



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 163/362 (45%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  + + +I  L K    +      DE+R+  +      +  LI+GY K G+ ++AL  F
Sbjct: 334 TVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLF 393

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           G +K     P V  YN +++   R      A  +  EM + +CLP++ T+++L+NG    
Sbjct: 394 GDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMV 453

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
               +     DEM  +G+ P+ F Y   IS    I     A++L  +M   G S D V Y
Sbjct: 454 RNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTY 513

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L++G CK   + +A  L      DG      +Y+CLI       R  EA   +  M  
Sbjct: 514 NVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVA 573

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + P VV Y + I      G +  A      M E G+ P+   YN L+   C +G  + 
Sbjct: 574 SGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTES 633

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A     E+ +R  +PN +T+T+LI G C+ G    A +L+ +M + G  P     NAL  
Sbjct: 634 AYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFK 693

Query: 422 GL 423
           G 
Sbjct: 694 GF 695



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 14/261 (5%)

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           R+  K S +   ++   A    +      ++A  G  P +   N ++         +   
Sbjct: 155 RMSTKFSAECQAQKSVPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMR 214

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN--GCTPSPAVYKSLMT 574
            ++ ++   G+ P   TY TL++   +  R + A  +   M     GC P+   Y  ++ 
Sbjct: 215 AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVIN 274

Query: 575 WSCRRRKFSLAFSL--WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
              R+ +   A  L   ++  +  S      +  I   L +  VE A   LLEM+ +   
Sbjct: 275 GLARKGELEKAAQLVDIMRLSKKASAFTYNPL--ITGLLARDFVEKAGALLLEMENEGIV 332

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLA 689
             +  Y   + GL + G  + A   F    E +A    P  +    LI+G CK G L  A
Sbjct: 333 PTVVTYNTLIDGLFKTGNAEAAQVKFD---EMRAKGLLPDLITYNSLINGYCKAGNLKQA 389

Query: 690 MDVFLYTLKNGFILRPRVCNY 710
           + +F    + G  L P V  Y
Sbjct: 390 LCLFGDLKRAG--LGPTVLTY 408


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/637 (26%), Positives = 300/637 (47%), Gaps = 28/637 (4%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY--KVGDCEKALE 119
           S  + +A+I + L+ +  D  +    E+ S   + V D + +    Y   K G C +A +
Sbjct: 210 SQTTYNALIQVFLRADKLDTAYLVKREMLS--YAFVMDRYTLSCFAYSLCKGGKCREAFD 267

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
              + ++F   PD   YN +++      LF  A+ + + M   +C+PN+VT+ +L++G  
Sbjct: 268 LIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCL 325

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           + G+     ++L  M   G  PN+  +  +I   C+      AY+LF KM   GC P ++
Sbjct: 326 RKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 385

Query: 240 AYNALLNGFCK---------LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
            YN  +   C          L  V++A + +      G V    + S     L  A ++D
Sbjct: 386 VYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL---GVVLNKVNVSNFARCLCGAGKFD 442

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A+    +M  +   PD   Y  +I  L +A KV+ A  L  +M+  GIVP  Y Y  LI
Sbjct: 443 QAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILI 502

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC  GL+ QAR    E+  +   PN  T+T LI    +   +  A +LF  M   GC 
Sbjct: 503 DSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCK 562

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTM 467
           P+V  + ALIDG CKAG++EKA  ++ +M       +   + +L        +  +   +
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGAL 622

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V+  C A  + +A+++L  +   G  P+ I Y+++I+GFCK+G +  A ++F ++  +G 
Sbjct: 623 VDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGY 682

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  TY + I+ L + +R +   ++  +M +N CTP+  +Y  ++   C+  K   A+ 
Sbjct: 683 SPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYK 742

Query: 588 LWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L L+        +  +  + I+ F + G++E  ++   +M  K        Y + +   C
Sbjct: 743 LMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCC 802

Query: 647 QDGQVKEALNIFSVLVECKAIVTPP---SCVKLIHGL 680
            +G + EA   + +L E K    P    S  K+I G 
Sbjct: 803 SNGLLDEA---YKLLDEMKQTYWPKHILSHRKIIEGF 836



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 249/516 (48%), Gaps = 37/516 (7%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI  L   +  +  +   +E++   +      + +LI  + K G  ++A + F +
Sbjct: 461 STYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDE 520

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M    C P+V  Y A+++   + +   +A  ++  M+   C PN+VT++ LI+G  K+G+
Sbjct: 521 MLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580

Query: 184 TEVAIKMLDEMTQRGIL------------------PNKFTYTIVISGLCQINRADEAYRL 225
            E A ++   M  RG +                  PN  TY  ++ GLC+ NR  EA+ L
Sbjct: 581 IEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC P+ + Y+A+++GFCK+ ++ +A  +     + G+ P L +YS  ID LF+
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R D       KM E    P+VV+Y  M+ GL + GK  +A KL+  M E+G  P+   
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVT 758

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y A+I GF   G ++Q   L  ++  +   PN  T+ +LI   C NG++D+A KL ++M+
Sbjct: 759 YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +      +     +I+G              +  E   +  L   LS+  +   D +  +
Sbjct: 819 QTYWPKHILSHRKIIEG--------------FSQEFITSIGLLDELSENESVPVD-SLYR 863

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGN--LPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            +++ Y  AG +  A  +L +++ S +  + +   Y SLI        ++ AL+L+  + 
Sbjct: 864 ILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMI 923

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            K + P+      LI GL +VD+ ++A ++   + Q
Sbjct: 924 SKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQ 959



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 35/341 (10%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L K N      + LD + +        V+  +I G+ K+G  + A E F KM E 
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P++Y Y++ ++  F+     L L V  +M++ +C PN+V ++ +++GL K GKT+ A
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEA 740

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K++ +M ++G  PN  TYT +I G  +  + ++   LF  M   GC+P+F+ Y  L+N 
Sbjct: 741 YKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINH 800

Query: 248 FCKLRRVDEALALLRSFEK--------------DGF-------------------VPRLG 274
            C    +DEA  LL   ++              +GF                   VP   
Sbjct: 801 CCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDS 860

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP--DVVLYGVMIRGLSEAGKVKDAMKLLS 332
            Y  LID   +A R + A     ++         +  LY  +I  LS A KV  A++L +
Sbjct: 861 LYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYA 920

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
            M  + +VP+      LIKG   +    +A  L   I + D
Sbjct: 921 SMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMD 961


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 251/500 (50%), Gaps = 22/500 (4%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFL 150
           G   +  D+FF ++    ++G   +A +   K+  +     V   NA L+ IA   +   
Sbjct: 187 GPNPIAFDIFFQVL---VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +A+ V+ E        N  +++++I  L + GK + A ++L +M  R   P+  +Y+ VI
Sbjct: 244 MAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G C +    +A +L   M+  G  P+   YN+++   CK+ +  EA  +LR       +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P    Y+ LI G F+      A  W+ +M  +KI PD + Y  +I+G  + GKV +   L
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M  RG+ PD   Y  LI  +C  G +  A SL  E+ +    PN  T+  LI G+C+
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFL 449
           +G +D A +L ++M K G   +V ++N++++G+CKAG +E+A  L  +ME+ G +P    
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP---- 536

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  T+++ YC  G I KA+K+L ++ + G  P ++T+N L+NGFC +
Sbjct: 537 ----------DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +    +L   +  KG+ PD++TY TL+      +      +I+ +M   G  P    Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 570 KSLMTWSCRRRKFSLAFSLW 589
             L+   C+ R    A+ L+
Sbjct: 647 NILIKGHCKARNLKEAWFLY 666



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 220/452 (48%), Gaps = 15/452 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           + RS    VVS  +  +I GY  +G+ +KAL+    M+    +P+ Y YN+++ +  +  
Sbjct: 285 DFRSSTPDVVS--YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG 342

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  V  EM+    +P+ V ++ LI+G  K G    A K  DEM  + I P+  TYT
Sbjct: 343 KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G  Q  +  E   LF +M   G  PD V Y  L++ +CK   +  A +L     + 
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y  LIDGL +    D A     +M ++ ++ +V +Y  M+ G+ +AG ++ A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +KL+ +M   GI PD   Y  +I  +C LG +D+A  L  E+  R   P   TF +L+ G
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C  GM++D  +L   M + G  P    +N L+   C    +     ++ +M        
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR------- 635

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
               +QG     D  +   +++ +C A  + +A+ +  ++ E G +P + +YN+LI  F 
Sbjct: 636 ----NQG--VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           K   I  A +LF+E++  GL  D   Y   ++
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 60  LRSFASNSAVISMLLKP-NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           L   A+NS  I M +K    + + W T               + ++I    ++G  ++A 
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGISWNTTS-------------YNIIIYSLCRLGKVKEAH 278

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
               +M      PDV  Y+ V++          AL +  +M      PN  T++ +I  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K GK+  A K+L EM  + I+P+   YT +I G  ++     A + F +M     SPD+
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + Y  L+ GF +  +V E   L       G  P   +Y+ LID   +A     A++ + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M +  + P++V YG +I GL + G++  A +LL +MR++G+  +   YN+++ G C  G 
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++QA  L  E+      P+  T+T +I   CR G +D A KL  +M   G  P+V  FN 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 419 LIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           L++G C  G LE  + LL + +E G  P              D  +  T+++Q+C    +
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVP--------------DAITYNTLMKQHCIRNSM 624

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           +   KI  ++   G  PD  TYN LI G CK  N+  A  L+KE+  KG  P   +Y  L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           I    +  +  +A  +F +M  +G      +Y
Sbjct: 685 IKRFYKKKKILEARELFEEMRGHGLVADGEIY 716



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 177/348 (50%), Gaps = 6/348 (1%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ S  +S     +  LI G+ + G   +    F +M     +PD   Y  ++++  +
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               + A +++ EMV++   PNIVT+  LI+GL K G+ + A ++LDEM ++G+  N   
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++G+C+    ++A +L  +M+ +G  PD + Y  +++ +C+L  +D+A  LL+   
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565

Query: 266 KDGFVPRLGSYSCLIDG---LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             G  P + +++ L++G   L   +  D    W   M E+ I PD + Y  +++      
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW---MLEKGIVPDAITYNTLMKQHCIRN 622

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +    K+   MR +G+ PD+  YN LIKG C    L +A  L  E+ ++  +P   ++ 
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            LI    +   + +A++LF +M   G      ++N  +D   + G++E
Sbjct: 683 ALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 48/421 (11%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL--------------IK 351
           P+ + + +  + L E G + +A KLL  +   G+V      NA               IK
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            FC+ G+           W      NT ++ I+I  +CR G V +A +L  +M+     P
Sbjct: 248 VFCEYGI----------SW------NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP 291

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  ++ +IDG C  GEL+KA  L   M+I G  P              ++ +  +++  
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKP--------------NRYTYNSIILL 337

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G   +A K+L ++     +PD + Y +LI+GF K+G++  A K F E+  K + PD
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPD 397

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +TY TLI G  +  +  +   +F +M   G  P    Y +L+   C+  +   AFSL  
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 591 QYLR-DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           + ++  ++         I+   + GE++ A + L EM  K     +  Y   + G+C+ G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
            +++A+ +   +          +   +I   C+ G +D A  +    L  G  L+P V  
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG--LQPTVVT 575

Query: 710 Y 710
           +
Sbjct: 576 F 576



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 134/276 (48%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  +  A+I  L K    D   + LDE+R   + +   ++  +++G  K G+ E+A++  
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M+     PD   Y  V++   R      A  +  EM+     P +VTF++L+NG    
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E   ++L  M ++GI+P+  TY  ++   C  N  +   +++ +M++ G +PD   Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G CK R + EA  L +   + G+VP + SY+ LI   ++ K+  EA   + +M  
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
             +  D  +Y   +    E G V+  + L  +  E+
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 170/378 (44%), Gaps = 32/378 (8%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANL 434
           PN   F I    +   G + +A+KL +K+   G   +V   NA +  +    E +E A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +F +  I  N T                S   ++   C  G + +A+++LMQ+    + P
Sbjct: 248 VFCEYGISWNTT----------------SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP 291

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+++Y+++I+G+C +G +  ALKL  ++Q+KGL+P+  TY ++I  L ++ +  +A ++ 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQK 613
            +M      P   VY +L+    +      A   + + L + IS         I+ F Q 
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 614 GEV---ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           G+V   +N    ++    K ++     YT  +   C+ G   E +N FS+  E   +   
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDE---VTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMT 465

Query: 671 PSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           P+ V    LI GLCK G LD A ++     K G  L   + N ++  +   K      A 
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI--CKAGNIEQAI 523

Query: 728 HLLCRMKSVGYDLDACLY 745
            L+  M+  G D DA  Y
Sbjct: 524 KLMKEMEVAGIDPDAITY 541


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 179/681 (26%), Positives = 304/681 (44%), Gaps = 66/681 (9%)

Query: 27  PFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQT 85
           P LS + V  V+M   +    F +F   A    L         +   L+ +G  +     
Sbjct: 83  PDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYV 142

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D ++   +   ++ +  +       G   +A  +  KM+EF    + Y YN ++++  +
Sbjct: 143 FDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLK 202

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A+ VY  M+     P++ T+S L+ GL K    E  + +L EM   G+ PN +T
Sbjct: 203 SRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYT 262

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +TI I  L +  + +EAY +  +M D GC PD V Y  L++  C  R++D A  +    +
Sbjct: 263 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMK 322

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P   +Y  L+D     +  D    ++ +M ++   PDVV + +++  L +AG   
Sbjct: 323 TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 382

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A   L  MR++GI+P+ + YN LI G   +  LD A  +   +      P  +T+ + I
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
               ++G    A + F KM+  G  P++   NA +  L KAG   +A  +FY + +IG  
Sbjct: 443 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 502

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  +   M++ Y   G I +A K+L ++ E+   PD+I  NSLIN
Sbjct: 503 P--------------DSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
              K   ++ A K+F  ++   L+P  VTY TL+ GL +  + ++A  +F  M Q GC P
Sbjct: 549 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 608

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           +   + +L    C+  + +LA                                      L
Sbjct: 609 NTITFNTLFDCLCKNDEVTLA--------------------------------------L 630

Query: 625 EMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIH 678
           +M FK+ D    P    Y   + GL ++GQVKEA+  F    + K +V P   +   L+ 
Sbjct: 631 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH---QMKKLVYPDFVTLCTLLP 687

Query: 679 GLCKRGYLDLAMDV---FLYT 696
           G+ K G ++ A  +   FLY+
Sbjct: 688 GVVKAGLIEDAYKIIANFLYS 708



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 183/732 (25%), Positives = 311/732 (42%), Gaps = 82/732 (11%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + +I  L      D   +   ++++G        +  L+  +    D +   + + +M++
Sbjct: 299  TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                PDV  +  +++   +   F  A A    M     LPN+ T++ LI GL +  + + 
Sbjct: 359  DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A+++ D M   G+ P  +TY + I    +   +  A   F KMK  G +P+ VA NA L 
Sbjct: 419  ALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  R  EA  +    +  G VP   +Y+ ++    +    DEA     +M E   EP
Sbjct: 479  SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEP 538

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            DV++   +I  L +A +V +A K+   M+E  + P    YN L+ G    G + +A  L 
Sbjct: 539  DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 598

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
              + ++   PNT TF  L   +C+N  V  A K+  KM   GC P V  +N +I GL K 
Sbjct: 599  EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 658

Query: 427  GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            G++++A   F++M+    P              D  +L T++     AGLI  AYKI+  
Sbjct: 659  GQVKEAMCFFHQMKKLVYP--------------DFVTLCTLLPGVVKAGLIEDAYKIIAN 704

Query: 487  ---------------------LAESGNLPDIITYNS--LINGFCKVG------------- 510
                                 LAE+G + + ++++   + NG C+ G             
Sbjct: 705  FLYSCADQPANLFWEDLMGSILAEAG-IDNAVSFSERLVANGICRDGDSILVPIIRYSFK 763

Query: 511  --NINGALKLFKELQLK-GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
              N +GA  LF++     G++P   TY  LI GL   D  E A  +F Q+   GC P  A
Sbjct: 764  HNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVA 823

Query: 568  VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-----SIEEFLQKGEVENAIQG 622
             Y  L+    +  K    F ++    +++S  + E         I   ++ G V++A+  
Sbjct: 824  TYNFLLDAYGKSGKIDELFEIY----KEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879

Query: 623  LLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCV-- 674
              ++   ++D   +P    Y   + GL + G++ EA  +F  + +  C+     P+C   
Sbjct: 880  YYDL---MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR-----PNCAIY 931

Query: 675  -KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
              LI+G  K G  D A  +F   +K G  +RP +  Y +         +     H    +
Sbjct: 932  NILINGFGKAGEADAACALFKRMVKEG--VRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989

Query: 734  KSVGYDLDACLY 745
            K  G + D   Y
Sbjct: 990  KESGLNPDVVCY 1001



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 247/558 (44%), Gaps = 91/558 (16%)

Query: 93   NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
            ++ +V D   + +++  Y KVG+ ++A++   +M E  C+PDV + N+++N  ++     
Sbjct: 498  DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVD 557

Query: 151  LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
             A  ++  M ++   P +VT++ L+ GL K+GK + AI++ + M Q+G  PN  T+  + 
Sbjct: 558  EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 617

Query: 211  SGLCQINRADEAYRLFLKMKDSGCSP---------------------------------- 236
              LC+ +    A ++  KM D GC P                                  
Sbjct: 618  DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP 677

Query: 237  DFVAYNALLNGFCKLRRVDEALALLRSF---------------------------EKDGF 269
            DFV    LL G  K   +++A  ++ +F                               F
Sbjct: 678  DFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSF 737

Query: 270  VPRLGSYSCLIDG------LFRAKRYDEAYAWYRKMFEE-----KIEPDVVLYGVMIRGL 318
              RL +     DG      + R        +  R +FE+      ++P +  Y ++I GL
Sbjct: 738  SERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGL 797

Query: 319  SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
             EA  ++ A  +   ++  G +PD   YN L+  +   G +D+   +  E+   +  PNT
Sbjct: 798  LEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNT 857

Query: 379  HTFTILICGMCRNGMVDDAQKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T  I+I G+ + G VDDA  L+ + M      P+   +  LIDGL K+G L +A  LF 
Sbjct: 858  ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 917

Query: 438  KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
             M + G  P                A    ++  +  AG    A  +  ++ + G  PD+
Sbjct: 918  GMSDYGCRPNC--------------AIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 963

Query: 497  ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
             TY+ L++  C VG ++  L  F+EL+  GL PD V Y  +INGL +  R E+A  +F +
Sbjct: 964  KTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNE 1023

Query: 557  MPQN-GCTPSPAVYKSLM 573
            M ++ G TP    Y SL+
Sbjct: 1024 MKKSRGITPDLYTYNSLI 1041



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 261/565 (46%), Gaps = 58/565 (10%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I+ L K +  D  W+    ++   +      +  L++G  K G  ++A+E F  M +
Sbjct: 544  NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              C P+   +N + +   +     LAL + ++M+ + C+P++ T++ +I GL K+G+ + 
Sbjct: 604  KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 663

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------------ 228
            A+    +M ++ + P+  T   ++ G+ +    ++AY++                     
Sbjct: 664  AMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLM 722

Query: 229  ---MKDSGCSPDFVAYNALL--NGFC---------------KLRRVDEALALLRSFEKD- 267
               + ++G   + V+++  L  NG C               K      A  L   F KD 
Sbjct: 723  GSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDL 781

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            G  P+L +Y+ LI GL  A   + A   + ++      PDV  Y  ++    ++GK+ + 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILIC 386
             ++  +M      P+T  +N +I G    G +D A  L  ++   RD  P   T+  LI 
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901

Query: 387  GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
            G+ ++G + +A++LF  M   GC P+  ++N LI+G  KAGE + A  LF +M + G  P
Sbjct: 902  GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961

Query: 446  TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                          D  +   +V+  C  G + +      +L ESG  PD++ YN +ING
Sbjct: 962  --------------DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIING 1007

Query: 506  FCKVGNINGALKLFKELQ-LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
              K   +  AL LF E++  +G+ PD  TY +LI  L      E+A +I+ ++ + G  P
Sbjct: 1008 LGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1067

Query: 565  SPAVYKSLMTWSCRRRKFSLAFSLW 589
            +   + +L+       K   A++++
Sbjct: 1068 NVFTFNALIRGYSLSGKPEHAYAVY 1092



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 169/322 (52%), Gaps = 2/322 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             + +LI G  +    E A + F ++K   C PDV  YN +L+   +         +Y EM
Sbjct: 789  TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML-DEMTQRGILPNKFTYTIVISGLCQINR 218
                C PN +T +++I+GL K+G  + A+ +  D M+ R   P   TY  +I GL +  R
Sbjct: 849  SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908

Query: 219  ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              EA +LF  M D GC P+   YN L+NGF K    D A AL +   K+G  P L +YS 
Sbjct: 909  LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968

Query: 279  LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-R 337
            L+D L    R DE   ++R++ E  + PDVV Y ++I GL +  ++++A+ L ++M++ R
Sbjct: 969  LVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSR 1028

Query: 338  GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            GI PD Y YN+LI      G++++A  +  EI +    PN  TF  LI G   +G  + A
Sbjct: 1029 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1088

Query: 398  QKLFNKMEKAGCFPSVGMFNAL 419
              ++  M   G  P+ G +  L
Sbjct: 1089 YAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 195/394 (49%), Gaps = 31/394 (7%)

Query: 165  LPNIVTFS--LLINGLSKSGKT--------------EVAIKMLDEMTQR--GILPNKFTY 206
            + N V+FS  L+ NG+ + G +                  +ML E   +  G+ P   TY
Sbjct: 731  IDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTY 790

Query: 207  TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++I GL + +  + A  +FL++K++GC PD   YN LL+ + K  ++DE   + +    
Sbjct: 791  NLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850

Query: 267  DGFVPRLGSYSCLIDGLFRAKRYDEAYA-WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P   +++ +I GL +A   D+A   +Y  M +    P    YG +I GLS++G++ 
Sbjct: 851  HECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 910

Query: 326  DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +A +L   M + G  P+   YN LI GF   G  D A +L   + K    P+  T+++L+
Sbjct: 911  EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 970

Query: 386  CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
              +C  G VD+    F +++++G  P V  +N +I+GL K   LE+A +LF +M+  +  
Sbjct: 971  DCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGI 1030

Query: 446  TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            T             D  +  +++     AG++ +A KI  ++  +G  P++ T+N+LI G
Sbjct: 1031 T------------PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1078

Query: 506  FCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            +   G    A  +++ +   G  P++ TY  L N
Sbjct: 1079 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 198/481 (41%), Gaps = 81/481 (16%)

Query: 283 LFRAKRYD---EAYAWYRKMFEEKI-EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +  A R D   E  A+   + +++I + D   Y  + + LS  G ++ A   L  MRE G
Sbjct: 126 MLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFG 185

Query: 339 IVPDTYCYNALIKGFCDLGLLDQAR--SLQVEIWKRDSL----PNTHTFTILICGMCRNG 392
            V + Y YN LI       LL ++R  +  +E+++R  L    P+  T++ L+ G+ +  
Sbjct: 186 FVLNAYSYNGLIH------LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR 239

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRL 451
            ++    L  +ME  G  P+V  F   I  L +AG++ +A  +  +M+  G  P      
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP------ 293

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF----- 506
                   D  +   +++  CTA  +  A ++  ++    + PD +TY +L++ F     
Sbjct: 294 --------DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345

Query: 507 ------------------------------CKVGNINGALKLFKELQLKGLRPDSVTYGT 536
                                         CK GN   A      ++ +G+ P+  TY T
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRD 595
           LI GL RV R +DA  IF  M   G  P+   Y   + +  +      A   + +   + 
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQV 651
           I+        S+    + G    A Q    + + L D  L P    Y + +    + G++
Sbjct: 466 IAPNIVACNASLYSLAKAGRDREAKQ----IFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 521

Query: 652 KEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
            EA+ + S +VE  C+  V   +   LI+ L K   +D A  +F+   +    L+P V  
Sbjct: 522 DEAIKLLSEMVENCCEPDVIVVN--SLINTLYKADRVDEAWKMFMRMKE--MKLKPTVVT 577

Query: 710 Y 710
           Y
Sbjct: 578 Y 578


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 253/505 (50%), Gaps = 20/505 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L +++        D+F  +IS Y +VG  E+A+E F ++KEF C P V IYN VL+    
Sbjct: 98  LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 157

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +    +   VY +M +    PN+ T+++L+  L K+ K + A K+L EM+ +G  PN  +
Sbjct: 158 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVS 217

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT VIS +C++    E  +L  + +     P    YNAL+NG CK R     + L+    
Sbjct: 218 YTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKGGVELMSEMV 272

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + SYS LI+ L  + + + A++   +M +    P++     +++G    G   
Sbjct: 273 EKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTF 332

Query: 326 DAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           DA+ + + M R  G+ P+   YN L++GFC  G +D+A S+ + + +    PN  T+  L
Sbjct: 333 DALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSL 392

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I G  + G ++ A  ++NKM  +GC P+V ++ ++++ LC+  + ++A  L         
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESL--------- 443

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLI 503
               + +    N      +    ++  C AG +  A K+  Q+ +     P+I+TYN L+
Sbjct: 444 ----IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELL 499

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G  K   I  A  L +E+ ++G+   + TY TL++G         A ++ G+M  NG +
Sbjct: 500 DGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKS 559

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSL 588
           P       ++   C++ K   A  +
Sbjct: 560 PDEITMNMIILAYCKQGKAERAVQM 584



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/589 (24%), Positives = 268/589 (45%), Gaps = 58/589 (9%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI-VTFSLLINGLSKSGKTEVAIKMLDEMT 195
           +AVL    ++    LAL  +  +   N   +  +TF ++I  L+  G+ +    +L +M 
Sbjct: 43  SAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 102

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            +G   ++  +  VIS   Q+  A+ A  +F ++K+ GC P    YN +L+      R+ 
Sbjct: 103 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 162

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM---------------- 299
               + R  ++DGF P + +Y+ L+  L +  + D A     +M                
Sbjct: 163 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222

Query: 300 --------------FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                           E+ EP V +Y  +I GL +    K  ++L+S+M E+GI P+   
Sbjct: 223 SSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVIS 282

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI    + G ++ A SL  ++ KR   PN HT + L+ G    G   DA  ++N+M 
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342

Query: 406 KA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS----------- 452
           +  G  P+V  +N L+ G C  G ++KA  +F  M EIG +P +    S           
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSL 402

Query: 453 QGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
           +G   + +K              +MVE  C      +A  ++  +++    P + T+N+ 
Sbjct: 403 EGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 462

Query: 503 INGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           I G C  G ++ A K+F+++ Q     P+ VTY  L++GL + +R E+A+ +  ++   G
Sbjct: 463 IKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 522

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAI 620
              S + Y +L+  SC      +A  L  + + +    D+ +M   I  + ++G+ E A+
Sbjct: 523 VEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAV 582

Query: 621 QGLLEMDFKLNDFQ--LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           Q L  +      ++  +  YT  + GLC+    ++ + +F  ++  + I
Sbjct: 583 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERII 631



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 38/279 (13%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ G+   G+ +KA+  F  M+E  C P++  Y +++N   ++     A+ ++ +M+
Sbjct: 354 YNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKML 413

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN+V ++ ++  L +  K + A  +++ M++    P+  T+   I GLC   R D
Sbjct: 414 TSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 473

Query: 221 EAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A ++F +M+    C P+ V YN LL+G  K  R++EA  L R     G      +Y+ L
Sbjct: 474 WAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTL 533

Query: 280 IDG-----------------LFRAKRYDE--------AYAWYRK------MFE------E 302
           + G                 +   K  DE        AY    K      M +       
Sbjct: 534 LHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRR 593

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           K  PDV+ Y  +I GL  +   +D + L   M    I+P
Sbjct: 594 KWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/213 (19%), Positives = 96/213 (45%), Gaps = 5/213 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-K 125
           ++++  L + + F      ++ +   N +     F   I G    G  + A + F +M +
Sbjct: 425 TSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 484

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           ++ C P++  YN +L+   +      A  +  E+       +  T++ L++G   +G   
Sbjct: 485 QYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPG 544

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG---CSPDFVAYN 242
           +A++++ +M   G  P++ T  ++I   C+  +A+ A ++ L +   G     PD ++Y 
Sbjct: 545 IALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM-LDLVSCGRRKWRPDVISYT 603

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            ++ G C+    ++ + L      +  +P L S
Sbjct: 604 NVIWGLCRSNCREDGVILFERMISERIIPILRS 636


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 251/500 (50%), Gaps = 22/500 (4%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFL 150
           G   +  D+FF ++    ++G   +A +   K+  +     V   NA L+ IA   +   
Sbjct: 187 GPNPIAFDIFFQVL---VEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIE 243

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +A+ V+ E        N  +++++I  L + GK + A ++L +M  R   P+  +Y+ VI
Sbjct: 244 MAIKVFCE---YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G C +    +A +L   M+  G  P+   YN+++   CK+ +  EA  +LR       +
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P    Y+ LI G F+      A  W+ +M  +KI PD + Y  +I+G  + GKV +   L
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M  RG+ PD   Y  LI  +C  G +  A SL  E+ +    PN  T+  LI G+C+
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFL 449
           +G +D A +L ++M K G   +V ++N++++G+CKAG +E+A  L  +ME+ G +P    
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDP---- 536

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  T+++ YC  G I KA+K+L ++ + G  P ++T+N L+NGFC +
Sbjct: 537 ----------DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +    +L   +  KG+ PD++TY TL+      +      +I+ +M   G  P    Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 570 KSLMTWSCRRRKFSLAFSLW 589
             L+   C+ R    A+ L+
Sbjct: 647 NILIKGHCKARNLKEAWFLY 666



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 219/452 (48%), Gaps = 15/452 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           + RS    VVS  +  +I GY  +G+ +KAL+    M+    +P+ Y YN+++ +  +  
Sbjct: 285 DFRSSTPDVVS--YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG 342

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  V  EM+    +P+ V ++ LI+G  K G    A K  DEM  + I P+  TYT
Sbjct: 343 KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G  Q  +  E   LF +M   G  PD V Y  L++ +CK   +  A +L     + 
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y  LIDGL +    D A     +M ++ ++ +V +Y  M+ G+ +AG ++ A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +KL+ +M   GI PD   Y  +I  +C LG +D+A  L  E+  R   P   TF +L+ G
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C  GM++D  +L   M + G  P    +N L+   C    +     ++ +M        
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR------- 635

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
               +QG     D  +   +++ +C A  + +A+ +  ++ E G +P + +YN+LI  F 
Sbjct: 636 ----NQG--VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           K      A +LF+E++  GL  D   Y   ++
Sbjct: 690 KKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 60  LRSFASNSAVISMLLKP-NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           L   A+NS  I M +K    + + W T               + ++I    ++G  ++A 
Sbjct: 232 LSRIANNSEGIEMAIKVFCEYGISWNTTS-------------YNIIIYSLCRLGKVKEAH 278

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
               +M      PDV  Y+ V++          AL +  +M      PN  T++ +I  L
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K GK+  A K+L EM  + I+P+   YT +I G  ++     A + F +M     SPD+
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + Y  L+ GF +  +V E   L       G  P   +Y+ LID   +A     A++ + +
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M +  + P++V YG +I GL + G++  A +LL +MR++G+  +   YN+++ G C  G 
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++QA  L  E+      P+  T+T +I   CR G +D A KL  +M   G  P+V  FN 
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 419 LIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           L++G C  G LE  + LL + +E G  P              D  +  T+++Q+C    +
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVP--------------DAITYNTLMKQHCIRNSM 624

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           +   KI  ++   G  PD  TYN LI G CK  N+  A  L+KE+  KG  P   +Y  L
Sbjct: 625 NTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           I    +  +  +A  +F +M  +G      +Y
Sbjct: 685 IKRFYKKRKFXEARELFEEMRGHGLVADGEIY 716



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ S  +S     +  LI G+ + G   +    F +M     +PD   Y  ++++  +
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               + A +++ EMV++   PNIVT+  LI+GL K G+ + A ++LDEM ++G+  N   
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++G+C+    ++A +L  +M+ +G  PD + Y  +++ +C+L  +D+A  LL+   
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565

Query: 266 KDGFVPRLGSYSCLIDG---LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             G  P + +++ L++G   L   +  D    W   M E+ I PD + Y  +++      
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW---MLEKGIVPDAITYNTLMKQHCIRN 622

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +    K+   MR +G+ PD+  YN LIKG C    L +A  L  E+ ++  +P   ++ 
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYN 682

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            LI    +     +A++LF +M   G      ++N  +D   + G++E
Sbjct: 683 ALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 48/421 (11%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL--------------IK 351
           P+ + + +  + L E G + +A KLL  +   G+V      NA               IK
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            FC+ G+           W      NT ++ I+I  +CR G V +A +L  +M+     P
Sbjct: 248 VFCEYGI----------SW------NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP 291

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  ++ +IDG C  GEL+KA  L   M+I G  P              ++ +  +++  
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKP--------------NRYTYNSIILL 337

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G   +A K+L ++     +PD + Y +LI+GF K+G++  A K F E+  K + PD
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPD 397

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +TY TLI G  +  +  +   +F +M   G  P    Y +L+   C+  +   AFSL  
Sbjct: 398 YITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHN 457

Query: 591 QYLR-DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           + ++  ++         I+   + GE++ A + L EM  K     +  Y   + G+C+ G
Sbjct: 458 EMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAG 517

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
            +++A+ +   +          +   +I   C+ G +D A  +    L  G  L+P V  
Sbjct: 518 NIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG--LQPTVVT 575

Query: 710 Y 710
           +
Sbjct: 576 F 576



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  +  A+I  L K    D   + LDE+R   + +   ++  +++G  K G+ E+A++  
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLM 526

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M+     PD   Y  V++   R      A  +  EM+     P +VTF++L+NG    
Sbjct: 527 KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E   ++L  M ++GI+P+  TY  ++   C  N  +   +++ +M++ G +PD   Y
Sbjct: 587 GMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G CK R + EA  L +   + G+VP + SY+ LI   ++ +++ EA   + +M  
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
             +  D  +Y   +    E G V+  + L  +  E+
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 170/378 (44%), Gaps = 32/378 (8%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANL 434
           PN   F I    +   G + +A+KL +K+   G   +V   NA +  +    E +E A  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +F +  I  N T                S   ++   C  G + +A+++LMQ+    + P
Sbjct: 248 VFCEYGISWNTT----------------SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTP 291

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+++Y+++I+G+C +G +  ALKL  ++Q+KGL+P+  TY ++I  L ++ +  +A ++ 
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQK 613
            +M      P   VY +L+    +      A   + + L + IS         I+ F Q 
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 614 GEV---ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           G+V   +N    ++    K ++     YT  +   C+ G   E +N FS+  E   +   
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDE---VTYTTLIDVYCKAG---EMVNAFSLHNEMVQMGMT 465

Query: 671 PSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           P+ V    LI GLCK G LD A ++     K G  L   + N ++  +   K      A 
Sbjct: 466 PNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGI--CKAGNIEQAI 523

Query: 728 HLLCRMKSVGYDLDACLY 745
            L+  M+  G D DA  Y
Sbjct: 524 KLMKEMEVAGIDPDAITY 541


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 181/676 (26%), Positives = 324/676 (47%), Gaps = 38/676 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE- 158
            + V+I    +VG  + A  + G++       +   ++ +L     K+    A+ +    
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-----TQRGILPNKFTYTIVISGL 213
           M  L C PN+ ++++L+ GL    +++ A+ +L  M     T+ G  P+  +Y  VI+GL
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 214 CQINRA-DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            +  R  D AY LF +M D G SPD V YN++++   K R +D+A  +L    K+G +P 
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +++ L+ G   + + ++A   +++M  + +EPDV  Y  ++  L + G+  +A K+  
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M +RG  P++  Y  L+ G+   G L +   L   + +    P+ + F ILI    ++G
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFL 449
            VDDA  LF+KM + G  P    +  ++D LC  G+++ A   F ++    +  +  +F 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 450 RLSQG--GNRVHDKAS-----------------LQTMVEQYCTAGLIHKAYKILMQLAES 490
            L  G       DKA                    T++   C  G++ +A  I   +   
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
               D+ITYN+LI+G+C  G ++ A KL + + L G++P+ VTY T+ING  +  R EDA
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           F +F QM   G  P    Y +++    + R+ + A  L+L  ++     D  +   I   
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLG 632

Query: 611 L-QKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           L Q    ++A+   Q L  +DF L +     + I +  L + G+  EA ++F+ L+    
Sbjct: 633 LCQNNCTDDALRIFQNLYLIDFHLEN---RTFNIMIDALLKGGRHDEAKDLFASLLARGL 689

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   ++  L ++G L+   D+FL   KNG     R+ N L+  LL   + +K   
Sbjct: 690 VPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGV 749

Query: 727 YHLLCRMKSVGYDLDA 742
           Y  L ++    + L+A
Sbjct: 750 Y--LSKIDENNFSLEA 763



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 176/710 (24%), Positives = 299/710 (42%), Gaps = 145/710 (20%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL---NCLPNIV 169
           D   A  +F ++        +   N  L+ A R     +A++++  MV +      PN++
Sbjct: 34  DSHHAHHAFDELLHRPTTSSIVDLNRALSDAARHSP-AVAISLFRRMVMVARPKVPPNLI 92

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQR-------------------------------- 197
           T+S++I+  S+ G  ++A   L  + +                                 
Sbjct: 93  TYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRR 152

Query: 198 ----GILPNKFTYTIVISGLCQINRA---------------------------------- 219
               G  PN F+YTI++ GLC  NR+                                  
Sbjct: 153 MPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGL 212

Query: 220 -------DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
                  D AY LF +M D G SPD V YN++++   K R +D+A  +L    K+G +P 
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +++ L+ G   + + ++A   +++M  + +EPDV  Y  ++  L + G+  +A K+  
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M +RG  P++  Y  L+ G+   G L +   L   + +    P+ + F ILI    ++G
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFL 449
            VDDA  LF+KM + G  P    +  ++D LC  G+++ A   F ++    +  +  +F 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 450 RLSQG--GNRVHDKAS-----------------LQTMVEQYCTAGLIHKAYKILMQLAES 490
            L  G       DKA                    T++   C  G++ +A  I   +   
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
               D+ITYN+LI+G+C  G ++ A KL + + L G++P+ VTY T+ING  +  R EDA
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMT--WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           F +F QM   G  P    Y +++   +  RR   +    LW+                  
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM------------------ 614

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
                  +++ I+           F +  Y I L+GLCQ+    +AL IF  L      +
Sbjct: 615 -------IKSGIK-----------FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHL 656

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
              +   +I  L K G  D A D+F   L  G +  P V  Y  +++SL+
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV--PNVVTYWLMMKSLI 704



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 249/543 (45%), Gaps = 37/543 (6%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           D+ R G    VVS  +  +I+G  + G   + A   F +M +    PDV  YN++++   
Sbjct: 192 DDTRGGYPPDVVS--YNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALS 249

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           + +    A  V   MVK   +PN +T + L++G   SGK   AI +   M + G+ P+ F
Sbjct: 250 KARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVF 309

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY  ++  LC+  R+ EA ++F  M   G  P+   Y  LL+G+     + +   LL   
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            ++G  P    ++ LI    +  + D+A   + KM  + + PD V YG+++  L   GKV
Sbjct: 370 VRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKV 429

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            DAM     +   G+ PD   +  LI G C     D+A  L VE+  R   PN   F  L
Sbjct: 430 DDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTL 489

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GK 443
           +  +C+ GMV  A+ +F+ M +      V  +N LIDG C  G++++A  L   M + G 
Sbjct: 490 LNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGV 549

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              ++ +  TM+  YC  G I  A+ +  Q+A  G  P I+TY++++
Sbjct: 550 KP--------------NEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            G  +      A +L+  +   G++ D  TY  ++ GL + +  +DA RIF  +      
Sbjct: 596 QGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNL------ 649

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
                   L+ +    R F++     L+      GR DE+       L +G V N +   
Sbjct: 650 -------YLIDFHLENRTFNIMIDALLK-----GGRHDEAKDLFASLLARGLVPNVVTYW 697

Query: 624 LEM 626
           L M
Sbjct: 698 LMM 700



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 224/530 (42%), Gaps = 45/530 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY   G    A+  F +M     +PDV+ YN ++    +    + A  ++  MVK  
Sbjct: 279 LLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRG 338

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN  T+  L++G +  G       +LD M + GI P+ + + I+I    +  + D+A 
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF KM+  G +PD V Y  +++  C + +VD+A+A       +G  P    +  LI GL
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               ++D+A     +M    I P+ + +  ++  L + G V  A  +   M    +  D 
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN LI G+C  G +D+A  L   +      PN  T+  +I G C+NG ++DA  LF +
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-------YKMEIGKNPTLFLRLSQGGN 456
           M   G  P +  ++ ++ GL +A     A  L+        K +IG    + L L Q  N
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQ--N 636

Query: 457 RVHDKA-----------------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
              D A                 +   M++     G   +A  +   L   G +P+++TY
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             ++    + G +     LF  L+  G   +S     L+                G++ Q
Sbjct: 697 WLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV----------------GKLLQ 740

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
            G      VY S +  +    + S A SL L      SG+ D+ + +I E
Sbjct: 741 KGEVRKAGVYLSKIDENNFSLEASTAESLVLLV---SSGKYDQHINAIPE 787


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 249/509 (48%), Gaps = 40/509 (7%)

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           + + + Y  N +++   +   F     V  EM K    P++VT +++++   ++G  E A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + ++D M  +GI P   TY  V+ GL +  R D+A  +F  M   G +PD  ++N L+ G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FC+   ++EAL   +        P + S+SCLI    R    D A  + R+M E  + PD
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V+Y ++I G   AG + +A+++  +M   G +PD   YN L+ G C    L  A  L  
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLN 393

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ +R   P+  TFT LI G CR+G ++ A + F+ +      P +  +N LIDG+C+ G
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453

Query: 428 ELEKANLLFYKM--------------------EIGKNPTLFLRLSQGGNR--VHDKASLQ 465
           +L KAN L+  M                    E G+    F  L +  N+  V +  +  
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++ YC +G + K  + L ++     +PD+ITYN+LI+G+ K G ++ A  L K ++ +
Sbjct: 514 SIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            ++PD+VTY  +I+G       ++A  ++ +M   G  P    Y S++            
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHV-------- 625

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKG 614
                     ++G   +S +  +E LQKG
Sbjct: 626 ----------VAGNSKKSFQLHDEMLQKG 644



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 226/467 (48%), Gaps = 23/467 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           V++   ++ GD E A+     M     +P +  YN+VL    R   +  A  V+  M   
Sbjct: 199 VMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDAC 258

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++ +F++LI G  ++G+ E A++   EM  R + P+  +++ +I    +    D A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
                +M++ G  PD V Y  ++ GFC+   + EAL +       G +P + +Y+ L++G
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + +R  +A     +M E  + PD+  +  +I G    G ++ A++    + ++ + PD
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C  G L +A  L  ++  R+  PN  T++ILI   C  G VD+A    +
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P++  +N++I G C++G + K      KM                   HDK 
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR------------------HDKV 540

Query: 463 -----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                +  T++  Y   G +H+A+ +L  +      PD +TYN +I+GF   GN+  A  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           ++K++  +G+ PD  TY ++ING       + +F++  +M Q G  P
Sbjct: 601 VYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 209/427 (48%), Gaps = 13/427 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G  + G  +KA E F  M      PDV  +N ++    R      AL  Y EM    
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++V+FS LI   ++ G+ + A + L EM + G++P+   YT+VI G C+     EA 
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           R+  +M   GC PD V YN LLNG CK RR+ +A  LL   ++ G  P L +++ LI G 
Sbjct: 355 RVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGY 414

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R    ++A  ++  + ++++ PD+V Y  +I G+   G +  A +L  DM  R I P+ 
Sbjct: 415 CRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNH 474

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y+ LI   C+ G +D A +   E+  +  +PN  T+  +I G CR+G V   Q+   K
Sbjct: 475 VTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M      P +  +N LI G  K G++ +A  L             L++ +  N   D  +
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL-------------LKIMENENVQPDAVT 581

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  +   G + +A  +  ++   G  PD  TY S+ING    GN   + +L  E+ 
Sbjct: 582 YNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEML 641

Query: 524 LKGLRPD 530
            KGL PD
Sbjct: 642 QKGLAPD 648



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 211/430 (49%), Gaps = 15/430 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V+  LL+   +D   +    + +  V+     F +LI G+ + G+ E+AL  + +M+ 
Sbjct: 233 NSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRG 292

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  ++ ++ +  R+     A     EM +   +P+ V ++++I G  ++G    
Sbjct: 293 RRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLE 352

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ DEM   G LP+  TY  +++GLC+  R  +A  L  +MK+ G  PD   +  L++
Sbjct: 353 ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIH 412

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C+   +++AL    +       P + +Y+ LIDG+ R     +A   +  M   +I P
Sbjct: 413 GYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFP 472

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y ++I    E G+V +A   L +M  +GIVP+   YN++IKG+C  G + + +   
Sbjct: 473 NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL 532

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++     +P+  T+  LI G  + G + +A  L   ME     P    +N +I G    
Sbjct: 533 PKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVH 592

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A+ ++ KM   G  P              D+ +  +M+  +  AG   K++++  
Sbjct: 593 GNMQEADWVYKKMGARGIEP--------------DRYTYMSMINGHVVAGNSKKSFQLHD 638

Query: 486 QLAESGNLPD 495
           ++ + G  PD
Sbjct: 639 EMLQKGLAPD 648



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 180/390 (46%), Gaps = 16/390 (4%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDVV + VM+     AG V+ AM L+  M  +GI P    YN+++KG    G  D+AR +
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+  +F +LI G CR G +++A + + +M      P V  F+ LI    +
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            GE++ A     +M E G  P              D      ++  +C AGL+ +A ++ 
Sbjct: 312 RGEMDHAAEYLREMREFGLMP--------------DGVIYTMVIGGFCRAGLMLEALRVR 357

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++   G LPD++TYN+L+NG CK   ++ A +L  E++ +G+ PD  T+ TLI+G  R 
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDES 603
              E A + F  +      P    Y +L+   CR+     A  LW   + R+I       
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
              I+   +KG+V+NA   L EM  K     +  Y   + G C+ G V +       +  
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            K +    +   LIHG  K G +  A ++ 
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 173/365 (47%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
             RF+     R+      S S +I +  +    D   + L E+R   +     ++ ++I 
Sbjct: 283 ALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIG 342

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           G+ + G   +AL    +M  F C PDV  YN +LN   +++    A  +  EM +    P
Sbjct: 343 GFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++ TF+ LI+G  + G  E A++  D ++ + + P+  TY  +I G+C+     +A  L+
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M      P+ V Y+ L++  C+  +VD A A L      G VP + +Y+ +I G  R+
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
               +   +  KM  +K+ PD++ Y  +I G  + GK+ +A  LL  M    + PD   Y
Sbjct: 523 GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTY 582

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N +I GF   G + +A  +  ++  R   P+ +T+  +I G    G    + +L ++M +
Sbjct: 583 NMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642

Query: 407 AGCFP 411
            G  P
Sbjct: 643 KGLAP 647


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 259/545 (47%), Gaps = 40/545 (7%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M++    PN+ T+++LI G    G+ +  +    EM + G LPN  TY  +I   C++ R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA+ L   M   G  P+ ++YN ++NG C+   + EA  +L      GF P   +Y+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++G  +   + +A   + +M    + P VV Y  +I  + +A  +  AM+    MR RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P+   Y  LI GF   GLL++A  +  E+ +    P+  T+   I G C    +++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
            +  +M + G  P V  ++ +I G C+ GEL++A  +  +M E G +P            
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP------------ 288

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  ++++  C    + +A  +  ++ + G  PD  TY +LIN +C  G++N AL 
Sbjct: 289 --DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L  E+  KG  PD+VTY  LINGL +  R  +A R+  ++      PS   Y +L+  +C
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE-NC 405

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG---EVENAIQGLLEMDFKLNDFQ 634
              +F    +L                  I+ F  KG   E +   + ++E + K  +  
Sbjct: 406 SNIEFKSVVAL------------------IKGFCMKGLMHEADRVFESMVERNHKPGE-- 445

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
            A Y + + G C+ G + +A N++  ++    +    + + LI  L K G  +   +V  
Sbjct: 446 -AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504

Query: 695 YTLKN 699
            TL++
Sbjct: 505 DTLRS 509



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 238/480 (49%), Gaps = 30/480 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+VY YN ++            L  + EM +  CLPN+VT++ LI+   K G+ + A  +
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M+ +G+ PN  +Y ++I+GLC+     EA+ +  +M   G +PD V YN LLNG+CK
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
                +AL +     ++G  P + +Y+ LI+ + +A+  + A  ++ +M    + P+   
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G S  G + +A ++L++M E G  P    YNA I G C L  +++A  +  E+ 
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           ++   P+  +++ +I G CR G +D A ++  +M + G  P    +++LI GLC+   L 
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A  L  +M ++G  P              D+ +  T++  YC  G ++KA  +  ++  
Sbjct: 308 EACDLSQEMLDMGLPP--------------DEFTYTTLINAYCVEGDLNKALHLHDEMIH 353

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE-- 547
            G LPD +TY+ LING  K      A +L  +L  +   P  VTY TLI     ++ +  
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413

Query: 548 -------------EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
                         +A R+F  M +    P  AVY  ++   CR      AF+L+ + + 
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 237/494 (47%), Gaps = 39/494 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+  VG+ +K L  FG+M+   C P+V  YN +++   +      A  +   M
Sbjct: 12  TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+++++++INGL + G  + A ++L+EM  +G  P++ TY  +++G C+    
Sbjct: 72  SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  +  +M  +G SP  V Y AL+N  CK R ++ A+         G  P   +Y+ L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191

Query: 280 IDGLFRA-----------------------------------KRYDEAYAWYRKMFEEKI 304
           IDG  R                                    +R +EA    ++M E+ +
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDVV Y  +I G    G++  A ++  +M E+G+ PD   Y++LI+G C++  L +A  
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+      P+  T+T LI   C  G ++ A  L ++M   G  P    ++ LI+GL 
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 371

Query: 425 KAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           K     +A  L +K+   E   +   +  L +  + +  K S+  +++ +C  GL+H+A 
Sbjct: 372 KQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFK-SVVALIKGFCMKGLMHEAD 430

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++   + E  + P    YN +I+G C+ GN+  A  L+KE+   G  P +VT  TLI  L
Sbjct: 431 RVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490

Query: 542 QRVDREEDAFRIFG 555
            +    E+   + G
Sbjct: 491 FKEGMNEEMSEVIG 504



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 245/513 (47%), Gaps = 31/513 (6%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M  S  SP+   YN L+ GFC +  + + L      E++G +P + +Y+ LID   +  R
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            DEA+   + M  + ++P+++ Y V+I GL   G +K+A ++L +M  +G  PD   YN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ G+C  G   QA  +  E+ +    P+  T+T LI  MC+   ++ A + F++M   G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P+   +  LIDG  + G L +A  +  +M E G +P++               +    
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV--------------VTYNAF 226

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +C    + +A  ++ ++ E G  PD+++Y+++I+GFC+ G ++ A ++ +E+  KG+
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD+VTY +LI GL  + R  +A  +  +M   G  P    Y +L+   C     + A  
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 588 LWLQYLRD------------ISGRDDES-MKSIEEFLQKGEVENAIQGLLEMDFKL---N 631
           L  + +              I+G + ++  +  +  L K   E ++   +  D  +   +
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           + +       + G C  G + EA  +F  +VE            +IHG C+ G L  A +
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           ++   + +GF+        L+++L     N+++
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 499



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 15/390 (3%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I+ L +       W+ L+E+     +     +  L++GY K G+  +AL    +M
Sbjct: 82  SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 141

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                 P V  Y A++N   + +    A+  + +M      PN  T++ LI+G S+ G  
Sbjct: 142 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 201

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++L+EMT+ G  P+  TY   I G C + R +EA  +  +M + G +PD V+Y+ +
Sbjct: 202 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 261

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++GFC+   +D A  + +   + G  P   +YS LI GL   +R  EA    ++M +  +
Sbjct: 262 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGL 321

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD   Y  +I      G +  A+ L  +M  +G +PD   Y+ LI G        +A+ 
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKR 381

Query: 365 LQVEIWKRDSLPNTHTFTILI--C-------------GMCRNGMVDDAQKLFNKMEKAGC 409
           L  ++   +S+P+  T+  LI  C             G C  G++ +A ++F  M +   
Sbjct: 382 LLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNH 441

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            P   ++N +I G C+ G L KA  L+ +M
Sbjct: 442 KPGEAVYNVIIHGHCRGGNLPKAFNLYKEM 471



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 172/366 (46%), Gaps = 20/366 (5%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +A+I+ + K    +   +  D++R   +      +  LI G+ + G   +A    
Sbjct: 149 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 208

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M E    P V  YNA ++     +    AL V  EMV+    P++V++S +I+G  + 
Sbjct: 209 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 268

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A +M  EM ++G+ P+  TY+ +I GLC++ R  EA  L  +M D G  PD   Y
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             L+N +C    +++AL L       GF+P   +YS LI+GL +  R  EA     K+  
Sbjct: 329 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 388

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           E+  P  V Y  +I                S++  + +V       ALIKGFC  GL+ +
Sbjct: 389 EESVPSDVTYDTLIEN-------------CSNIEFKSVV-------ALIKGFCMKGLMHE 428

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +   + +R+  P    + ++I G CR G +  A  L+ +M  +G  P       LI 
Sbjct: 429 ADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIK 488

Query: 422 GLCKAG 427
            L K G
Sbjct: 489 ALFKEG 494


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 243/480 (50%), Gaps = 15/480 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL+ F +  E     +   YN + +   +    + A  +  +M    C+P+++++S +IN
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  + G+ +  +K+++EM  +G+ PN +TY  VI  LC+  +  EA R+  +M   G +P
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V Y  L++GFCKL  V  A  L    +K    P   +Y+ +I GL +  R  EA   +
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M  +++EPD V Y  +I G  + GK+K+A  L + M + G+ P+   Y AL  G C  
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 476

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +D A  L  E+ ++    N +T+  L+ G+C+ G +D A KL   ME AG  P    +
Sbjct: 477 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 536

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
             L+D  CK+ E+ +A+ L  +M +    PT+               +   ++  +C +G
Sbjct: 537 TTLMDAYCKSREMVRAHELLRQMLDRELQPTV--------------VTFNVLMNGFCMSG 582

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           ++    K+L  + E G +P+  TYNSLI  +C   N+    ++++ +  KG+ PD  TY 
Sbjct: 583 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYN 642

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            LI G  +    ++A+ +   M   G   + + Y +L+    +R+KF  A  L+ Q  R+
Sbjct: 643 ILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE 702



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 287/610 (47%), Gaps = 50/610 (8%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFR----FFIWAAKRK----RLRSFASNSAVI 70
           EP    L P+ SK     +I    N +  +R    FF WA  R+      R   +  A  
Sbjct: 79  EPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATA 138

Query: 71  SMLLK------------PN-----GFDLYWQTLDELRS--GNVSVVSDVFFVLISGYYKV 111
           S  LK            PN      F  + + L       G+   V D+FF ++    + 
Sbjct: 139 SKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVL---VEA 195

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           G  ++A + F KM  +     V   N  + +++       +AL V+ E  ++    N  +
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++++ + L + G+   A ++L +M  RG +P+  +Y+ VI+G CQ+       +L  +M+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G  P+   YN ++   CK  +V EA  +LR    +G  P    Y+ LIDG  +     
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            AY  + +M + KI PD + Y  +I GL + G+V +A KL  +M  + + PD   Y ALI
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G+C  G + +A SL  ++ +    PN  T+T L  G+C+ G VD A +L ++M + G  
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            ++  +N+L++GLCKAG +++A  L   ME+ G +P              D  +  T+++
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP--------------DAVTYTTLMD 541

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            YC +  + +A+++L Q+ +    P ++T+N L+NGFC  G +    KL K +  KG+ P
Sbjct: 542 AYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 601

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           ++ TY +LI      +       I+  M   G  P    Y  L+   C+ R    A+ L 
Sbjct: 602 NATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLH 661

Query: 590 LQYLRDISGR 599
               RD+ G+
Sbjct: 662 ----RDMVGK 667



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 221/482 (45%), Gaps = 50/482 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ELR     V+S  +  +I+GY +VG+ ++ L+   +M+    +P+ Y YN V+ +  +  
Sbjct: 280 ELRGCIPDVIS--YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  V  EM+     P+ V ++ LI+G  K G    A ++ DEM +R I P+  TYT
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI GLCQ  R  EA +LF +M      PD V Y AL++G+CK  ++ EA +L     + 
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ L DGL +    D A     +M  + +E ++  Y  ++ GL +AG +  A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +KL+ DM   G  PD   Y  L+  +C    + +A  L  ++  R+  P   TF +L+ G
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C +GM++D +KL   M + G  P+   +N+LI                           
Sbjct: 578 FCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLI--------------------------- 610

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                +QYC    +    +I   +   G +PD  TYN LI G C
Sbjct: 611 ---------------------KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K  N+  A  L +++  KG      +Y  LI G  +  +  +A  +F QM + G      
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 568 VY 569
           +Y
Sbjct: 710 IY 711



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 192/373 (51%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI +L K        + L E+ S  ++    ++  LI G+ K+G+   A   F +M++
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y AV+    +    + A  +++EMV     P+ VT++ LI+G  K GK + 
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + ++M Q G+ PN  TYT +  GLC+    D A  L  +M   G   +   YN+L+N
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   +D+A+ L++  E  GF P   +Y+ L+D   +++    A+   R+M + +++P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            VV + V++ G   +G ++D  KLL  M E+GI+P+   YN+LIK +C    +     + 
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 626

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +  +P+ +T+ ILI G C+   + +A  L   M   G   +V  +NALI G  K 
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 427 GELEKANLLFYKM 439
            +  +A  LF +M
Sbjct: 687 KKFLEARELFEQM 699



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 135/577 (23%), Positives = 248/577 (42%), Gaps = 85/577 (14%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ-INRADEAYRLFLK 228
            F +    L ++G  + A K+ D+M   G+L +  +  + IS L + ++    A ++F++
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
             + G   +  +YN + +  C+L RV EA  LL   E  G +                  
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI------------------ 285

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
                            PDV+ Y  +I G  + G+++  +KL+ +M+ +G+ P+ Y YN 
Sbjct: 286 -----------------PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNG 328

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I   C  G + +A  +  E+      P+   +T LI G C+ G V  A +LF++M+K  
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 388

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P    + A+I GLC+ G + +A+ LF++M       +  RL        D+ +   ++
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEM-------VCKRLEP------DEVTYTALI 435

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + YC  G + +A+ +  Q+ + G  P+I+TY +L +G CK G ++ A +L  E+  KGL 
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            +  TY +L+NGL +    + A ++   M   G  P    Y +LM   C+ R+   A  L
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 555

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
             Q L      D E   ++  F                             + + G C  
Sbjct: 556 LRQML------DRELQPTVVTF----------------------------NVLMNGFCMS 581

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G +++   +   ++E   +    +   LI   C R  +    +++      G +      
Sbjct: 582 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 641

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           N L++    +++ K+  A+ L   M   G++L    Y
Sbjct: 642 NILIKGHCKARNMKE--AWFLHRDMVGKGFNLTVSSY 676



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 181/391 (46%), Gaps = 18/391 (4%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +D   +   F I    +   GM+D+A+KLF+KM   G   SV   N  I  L +  +  K
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             L            +F+   + G    + AS   +    C  G + +A+++L+Q+   G
Sbjct: 236 IAL-----------KVFVEFPEVG-VCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG 283

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            +PD+I+Y+++ING+C+VG +   LKL +E+Q+KGL+P+  TY  +I  L +  +  +A 
Sbjct: 284 CIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAE 343

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEF 610
           R+  +M   G  P   +Y +L+   C+    S A+ L+ +   R IS         I   
Sbjct: 344 RVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGL 403

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            Q G V  A +   EM  K  +     YT  + G C++G++KEA ++ + +++       
Sbjct: 404 CQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   L  GLCK G +D A ++     + G  L     N L+  L   K      A  L+
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL--CKAGNIDQAVKLM 521

Query: 731 CRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
             M+  G+  DA  Y    +L+     +REM
Sbjct: 522 KDMEVAGFHPDAVTYT---TLMDAYCKSREM 549



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 133/287 (46%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  + +A+   L K    D   + L E+    + +    +  L++G  K G+ ++A++  
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M+     PD   Y  +++   + +  + A  +  +M+     P +VTF++L+NG   S
Sbjct: 522 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 581

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E   K+L  M ++GI+PN  TY  +I   C  N       ++  M   G  PD   Y
Sbjct: 582 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 641

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G CK R + EA  L R     GF   + SY+ LI G ++ K++ EA   + +M  
Sbjct: 642 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           E +  D  +Y +      + GK++  ++L  +  E+ +V D    N 
Sbjct: 702 EGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 264/549 (48%), Gaps = 60/549 (10%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           + SVV+  +  LI G  K GD + A     KM +  C P+V  Y A+++   + +    A
Sbjct: 7   DASVVT--YTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 64

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +     M++  C P++VT++ LI+GL  + + + A  +L E+ + G  PN  TY+ ++  
Sbjct: 65  IQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIW 124

Query: 213 LCQINRADEAYRLFL-------------------------------------KMKDSGCS 235
            C+  R D+A  L                                       +M +SG  
Sbjct: 125 NCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI 184

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V YN  ++G CK  ++D+ L +L   ++ G  P + ++  +I GL +A R D+A+  
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR--ERGIVPDTYCYNALIKGF 353
           ++ M E    PD + Y +M+  LS A ++    ++L  M+  + G V + Y +NA I   
Sbjct: 245 FKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGAL 304

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF-PS 412
           C  G    A+++ + + +  SLPN  ++  +I G+C++G VDDA KL  KM  +GC  P 
Sbjct: 305 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 364

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           V  FN LI G CKAG L +A+ L  +M+  KN             V D  +  T+++   
Sbjct: 365 VIFFNTLISGFCKAGRLSQAHQLLIEMK-AKNIC-----------VPDVVTYNTLIDGQS 412

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + +A  +L ++   G  P+++TY +LING+ K G    A  LF E+  KG  PD +
Sbjct: 413 KFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDII 472

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNG--CTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           TY T+++   +      A  ++ Q+      C+P    Y+ L+   CR        +L  
Sbjct: 473 TYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTL-- 530

Query: 591 QYLRDISGR 599
             L++++ R
Sbjct: 531 --LQEMTAR 537



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 227/439 (51%), Gaps = 22/439 (5%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM++   +P++VT++  I+GL K+GK +  ++ML+EM + GI P+  T+  +ISGLC+ N
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE--KDGFVPRLGS 275
           R D+A+++F  M + GC PD + Y+ +L+   +  R+D    +L   +  K G V  + +
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++  I  L R+ ++  A      M E    P+++ Y  +I GL ++G V DA KL   M 
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356

Query: 336 ERGIV-PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGM 393
           + G   PD   +N LI GFC  G L QA  L +E+  ++  +P+  T+  LI G  + G 
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLS 452
           +  A+ L  +M+  GC P+V  + ALI+G  K G  E+A  LF +M   G  P       
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFP------- 469

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL--PDIITYNSLINGFCKVG 510
                  D  +  T++  +  AG++ KA  +  QL    +   PD ITY  LI+G+C+  
Sbjct: 470 -------DIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAE 522

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR-EEDAFRIFGQMPQNGCTPSPAVY 569
           +    L L +E+  +G   DS TY  LI  L   +     A  ++ QM    C PS +++
Sbjct: 523 DTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIF 582

Query: 570 KSLMTWSCRRRKFSLAFSL 588
            SL+    R    + A S+
Sbjct: 583 NSLVRLFLRTGDVNSARSM 601



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 235/532 (44%), Gaps = 55/532 (10%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M   G   +  TYT +I GLC+    D A  L  KM D+GC+P+ V Y AL++G CK RR
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             +A+  ++   + G  P L +Y+ LI GL  A R D+A    +++      P+ + Y  
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 314 MI------RGLSEAGKVKDAMKLLS-------------------------------DMRE 336
           ++      R L +A  +   M L                                 +M E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G +PD   YN  I G C  G LD+   +  E+ +    P+  TF  +I G+C+   +DD
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A ++F  M + GC P    ++ ++D L +A  L+  + +   M+  K             
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMK-----------AG 289

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            V +  +    +   C +G    A  IL+ + ESG+LP++++YN +I+G CK GN++ A 
Sbjct: 290 CVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAW 349

Query: 517 KLFKELQLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQM-PQNGCTPSPAVYKSLMT 574
           KL +++   G  +PD + + TLI+G  +  R   A ++  +M  +N C P    Y +L+ 
Sbjct: 350 KLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLID 409

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              +      A  L LQ ++ +  + +    +  I  + + G  E A     EM  K   
Sbjct: 410 GQSKFGSLKQA-KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCF 468

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCK 682
             +  Y   L    + G + +A  ++  L    +  +P +     LI G C+
Sbjct: 469 PDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCR 520



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 53/479 (11%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           R+    + +  IS L K    D   + L+E+  G +      F  +ISG  K    + A 
Sbjct: 183 RIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAF 242

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV--YYEMVKLNCLPNIVTFSLLIN 176
           + F  M E  C PD   Y+ +L+   R         V  + + +K  C+  + T +  I 
Sbjct: 243 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIG 302

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CS 235
            L +SGK  +A  +L  M + G LPN  +Y  VI GLC+    D+A++L  KM DSG C 
Sbjct: 303 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 362

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           PD + +N L++GFCK  R+ +A  LL   + K+  VP + +Y+ LIDG  +     +A  
Sbjct: 363 PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKL 422

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             ++M     +P+VV Y  +I G ++ G  ++A  L  +M  +G  PD   YN ++  F 
Sbjct: 423 LLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFS 482

Query: 355 DLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
             G++ +A  +  ++  + S   P+  T+ ILI G CR    +    L  +M   G    
Sbjct: 483 KAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCD 542

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
              +N LI  L +  E+    L  Y                           Q M++Q C
Sbjct: 543 SYTYNVLIAKLAETEEVPSKALAVY---------------------------QQMLDQDC 575

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
                               +P    +NSL+  F + G++N A  + +E+  KG   D+
Sbjct: 576 --------------------VPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 45/309 (14%)

Query: 53  WAAKRKRLRSFASNSAVI------SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF-VLI 105
           W   RK L S      VI      S   K        Q L E+++ N+ V   V +  LI
Sbjct: 349 WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLI 408

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
            G  K G  ++A     +M+   C+P+V  Y A++N   +  ++  A +++ EM    C 
Sbjct: 409 DGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCF 468

Query: 166 PNIVTFSLLINGLSKSG---KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           P+I+T++ +++  SK+G   K E   + L   T     P+  TY I+I G C+    ++ 
Sbjct: 469 PDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSY-CSPDAITYRILIDGYCRAEDTEQG 527

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   G S D   YN L+    KL   +E             VP           
Sbjct: 528 LTLLQEMTARGWSCDSYTYNVLI---AKLAETEE-------------VP----------- 560

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                   +A A Y++M ++   P   ++  ++R     G V  A  ++ +M E+G + D
Sbjct: 561 -------SKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVD 613

Query: 343 TYCYNALIK 351
                AL K
Sbjct: 614 ASNLEALNK 622


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 239/499 (47%), Gaps = 64/499 (12%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL ++ E++     PN  T+++LI G  K G+   A+ +  +M   G+LPN  T   ++ 
Sbjct: 16  ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 75

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+I +   A +LF +M+     P   ++N LL GF    RV +ALA L+   K     
Sbjct: 76  GLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSV 135

Query: 272 RLGSYSCLIDGLF----RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             G+Y+ ++ GL      A R ++A  ++++M    +EPD+  Y +++  LS++G++ +A
Sbjct: 136 ATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEA 195

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK---------------- 371
             L S M      PD   YN L+ G+C +G   +A+SL  EI K                
Sbjct: 196 HALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINC 252

Query: 372 -------------------RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
                               + +PN  TF  LI G C+ GM++DA KLF +MEK GC  +
Sbjct: 253 YCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKAT 312

Query: 413 VGMFNALIDGLCKA-GELEKANLLFYKME-IGKNPTLFL------------RLSQG---- 454
           +  +N LID LCK  G +  A  LF K+E  G  PT+              RLS+     
Sbjct: 313 IVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYF 372

Query: 455 ----GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
               G    +  +   +++  C    + +A K L  +   G  P ++TY  LINGFCK G
Sbjct: 373 DEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  AL  F++++L G  P++V + TLI+GL + +R  D  R+   M   GC P    Y 
Sbjct: 433 ELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYN 492

Query: 571 SLMTWSCRRRKFSLAFSLW 589
            L++  C   +   A  L+
Sbjct: 493 CLISGLCSANRVEDAQRLF 511



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 199/409 (48%), Gaps = 44/409 (10%)

Query: 86  LDELRSGNVSVVSDVFFVLISGY----YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           L ++R  + SV +  + +++ G           E+A+E F +MK    +PD+  Y+ +L+
Sbjct: 125 LQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLS 184

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                     A A++  M    C P+I+T+++L++G  K G+T  A  ++ E+ + G  P
Sbjct: 185 ALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 241

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N FTY+I+I+  C++++ +EA+ +F+KM +S C P+ V +N L+ GFCK   +++A+ L 
Sbjct: 242 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 301

Query: 262 RSFEK------------------------------------DGFVPRLGSYSCLIDGLFR 285
              EK                                     G  P + +Y+ LI G   
Sbjct: 302 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCD 361

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R  EA  ++ +M E K  P+V+ Y ++I GL +  ++K+A K L DM+  G  P    
Sbjct: 362 ARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVT 420

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI GFC  G L  A     ++      PNT  F  LI G+C+    +D  +L   M 
Sbjct: 421 YGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMH 480

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
             GC P V  +N LI GLC A  +E A  LF  M    N T F  L +G
Sbjct: 481 AEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACAPNVTTFNFLIRG 529



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 154/304 (50%), Gaps = 5/304 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I+ Y K+   E+A E F KM E +C P+   +N ++    +  +   A+ ++ EM
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 160 VKLNCLPNIVTFSLLINGLSKS-GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            K+ C   IVT++ LI+ L K  G    A+ + +++   G+ P   TY  +I G C   R
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA + F +M +  C+P+ + Y+ L++G CK+RR+ EA   L   +  G+ P + +Y  
Sbjct: 365 LSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  +      A  ++ KM      P+ V++  +I GL +A +  D ++LL  M   G
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   YN LI G C    ++ A+ L          PN  TF  LI G+C    V++A+
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRL---FDGMACAPNVTTFNFLIRGLCAQKKVEEAR 540

Query: 399 KLFN 402
            + +
Sbjct: 541 NILD 544



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 235/531 (44%), Gaps = 67/531 (12%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NALL+G    R+ D+AL L +      F P   +Y+ LI G  +  +  +A + +  M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + P+      ++ GL E G++  A+KL  +M+    +P +  +N L++GF   G +  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMC----RNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           A +   ++ K  S   T T+ +++ G+C        ++ A + F +M+ +G  P +  ++
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ------- 470
            L+  L  +G + +A+ LF  M    +   +  L  G  ++      Q+++++       
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE 240

Query: 471 ------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                       YC    + +A+++ M++ ES  +P+ +T+N+LI GFCK G +  A+KL
Sbjct: 241 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 300

Query: 519 FKELQLKGLRPDSVTYGTLINGL-QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           F E++  G +   VTY TLI+ L ++      A  +F ++   G TP+   Y SL+   C
Sbjct: 301 FAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC 360

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             R+ S A    +QY  ++ G+                  N I                 
Sbjct: 361 DARRLSEA----MQYFDEMEGKC---------------APNVI----------------T 385

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFL 694
           Y+I + GLC+  ++KEA      L + KA    P+ V    LI+G CK G L  A+  F 
Sbjct: 386 YSILIDGLCKVRRMKEAAK---TLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFE 442

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                G      + N L+  L   K  +      LLC M + G   D   Y
Sbjct: 443 KMKLAGCAPNTVIFNTLIDGL--CKAERANDGLRLLCHMHAEGCKPDVITY 491



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 153/300 (51%), Gaps = 5/300 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I+   K +  +  W+   ++   N    +  F  LI+G+ K G  E A++ F +M++
Sbjct: 247 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
             C+  +  YN +++   +K+  +  A+ ++ ++      P IVT++ LI G   + +  
Sbjct: 307 IGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLS 366

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A++  DEM  +   PN  TY+I+I GLC++ R  EA +    MK  G +P  V Y  L+
Sbjct: 367 EAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLI 425

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NGFCK   +  AL      +  G  P    ++ LIDGL +A+R ++       M  E  +
Sbjct: 426 NGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCK 485

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+ Y  +I GL  A +V+DA +L   M      P+   +N LI+G C    +++AR++
Sbjct: 486 PDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNI 542


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 269/564 (47%), Gaps = 21/564 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +++GY + G  E A      +      P+ Y Y  V+     +     ALAV  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C P    + +++    + G    A+++L+++  RG   +     +V++ +C     D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L   +   GC PD V+YNA+L G C  +R      L+    +    P + +++ LI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R   ++  +    +M E    PD+ +Y  +I G+ + G +K A ++L+ M   G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+  CYN L+KG C     ++   L  E++ +D   +  TF IL+   C+NG+VD   +L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
             +M   GC P V  +  +I+G CK G +++A +L   M   G  P              
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP-------------- 435

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  S   +++  C+A     A  ++ Q+ + G   + IT+N+LIN  CK G +  A++L 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K++ + G  PD ++Y T+I+GL +  + ++A  +   M   G +P+  +Y S+ +   R 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + +    ++   ++D + R D  + +  I    ++GE E AI+ L  M         + 
Sbjct: 556 GRINKVIQMF-DNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614

Query: 638 YTIWLIGLCQDGQVKEALNIFSVL 661
           YTI + GL  +G VKEA  + + L
Sbjct: 615 YTILIRGLASEGFVKEAQEMLTEL 638



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 246/551 (44%), Gaps = 49/551 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  T+  ++  L   G+   A+ +LDEM +RG  P    Y +++   C+      A R+
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              +   GC+ D    N +LN  C    VD+AL LLR          L S+ C       
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRD---------LPSFGC------- 223

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              EPDVV Y  +++GL  A +     +L+ +M      P+   
Sbjct: 224 -------------------EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 264

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL ++   +  ++ +    P+   +  +I G+C+ G +  A ++ N+M 
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMP 324

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N L+ GLC A   E+   L  +M     P              D  +  
Sbjct: 325 SYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPL-------------DDVTFN 371

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ +C  GL+ +  ++L Q+   G +PD+ITY ++INGFCK G I+ A+ L K +   
Sbjct: 372 ILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P++++Y  ++ GL   +R  DA  +  QM Q GC  +P  + +L+ + C++     A
Sbjct: 432 GCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQA 491

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G+ + A++ L  M  K        Y+     
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L ++G++ + + +F  + +            +I  LCKRG  + A++   Y + +G +  
Sbjct: 552 LSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPN 611

Query: 705 PRVCNYLLRSL 715
                 L+R L
Sbjct: 612 ESTYTILIRGL 622



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 169/342 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K     +  + L+ + S  +      +  L+ G       E+  E   +M +
Sbjct: 301 ATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFD 360

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M+   C+P+++T++ +ING  K G  + 
Sbjct: 361 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDE 420

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  MT  G  PN  +YTIV+ GLC   R  +A  L  +M   GC  + + +N L+N
Sbjct: 421 AVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLIN 480

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + DEA      M  + + P
Sbjct: 481 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 540

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G++   +++  ++++  I  D   YNA+I   C  G  ++A    
Sbjct: 541 NTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFL 600

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+TILI G+   G V +AQ++  ++   G
Sbjct: 601 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 209/478 (43%), Gaps = 19/478 (3%)

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++ G  RA + + A    R      + P+   Y  ++R L   G++ DA+ +L +M 
Sbjct: 93  YNAMVAGYCRAGQLESAR---RLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG  P    Y+ +++  C  G    A  +  ++  R    +     +++  +C  G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A  L   +   GC P V  +NA++ GLC A        L  +M         +R++   
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM---------VRMACPP 260

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           N V    +  T++   C  GL  + +++L Q+AE G  PDI  Y ++I+G CK G++  A
Sbjct: 261 NIV----TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVA 316

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            ++   +   GL+P+ V Y TL+ GL   +R E+   +  +M    C      +  L+ +
Sbjct: 317 HEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+         L  Q L      D  +  + I  F ++G ++ A+  L  M        
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              YTI L GLC   +  +A ++ S +++    + P +   LI+ LCK+G ++ A+++  
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
             L NG    P + +Y        K  K   A  LL  M + G   +  +Y    S L
Sbjct: 497 QMLVNG--CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 138/275 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +L+  + + G  ++ +E   +M    C PDV  Y  V+N   ++ L   A+ +   M 
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN +++++++ GL  + +   A  ++ +M Q+G   N  T+  +I+ LC+    +
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M  +GCSPD ++Y+ +++G  K  + DEAL LL      G  P    YS + 
Sbjct: 490 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 549

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R  R ++    +  + +  I  D VLY  +I  L + G+ + A++ L+ M   G V
Sbjct: 550 SALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCV 609

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
           P+   Y  LI+G    G + +A+ +  E+  + +L
Sbjct: 610 PNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 67/136 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    D   + L+ + +  +S  + ++  + S   + G   K ++ F  +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+     MV   C+PN  T+++LI GL+  G  
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 185 EVAIKMLDEMTQRGIL 200
           + A +ML E+  +G L
Sbjct: 629 KEAQEMLTELCSKGAL 644


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 308/723 (42%), Gaps = 108/723 (14%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGN 93
           V  + ++ ++G + F W +  K+   F++    S+ + +L +   F+     L  LR+ N
Sbjct: 70  VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNEN 129

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLA 152
           V +  +    ++  Y + G   KA+E +  + E +D  PDV   N++L++  + +    A
Sbjct: 130 VKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDA 189

Query: 153 LAVYYEMV----------------------------KL-------NCLPNIVTFSLLING 177
             VY EM                             KL        C+PNIV ++ +I G
Sbjct: 190 RKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGG 249

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG---- 233
             K G  E A  +  E+  +G +P   T+  +I+G C+      + RL  ++K+ G    
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS 309

Query: 234 -------------------------------CSPDFVAYNALLNGFCKLRRVDEALALLR 262
                                          C PD   YN L+N  CK  + + A+  L 
Sbjct: 310 VWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              K G +P   SY+ LI    ++K YD A     +M E   +PD+V YG++I GL  +G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            + DA+ +   + +RG+ PD   YN L+ G C  G    A+ L  E+  R+ LP+ + + 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G  R+G  D+A+K+F+   + G    V   NA+I G C++G L++A     +M   
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM--- 546

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                        + V DK +  T+++ Y     +  A KI   + ++   P+++TY SL
Sbjct: 547 ----------NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSL 596

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE-EDAFRIFGQMPQNG 561
           INGFC  G+   A + FKE+QL+ L P+ VTY TLI  L +     E A   +  M  N 
Sbjct: 597 INGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNK 656

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           C P+   +  L+    ++    +        L +  G +        EF  + + +    
Sbjct: 657 CVPNEVTFNCLLQGFVKKTSGKV--------LAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
                         A Y   L+ LC  G VK A      +V+      P S   ++HG C
Sbjct: 709 ------------HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756

Query: 682 KRG 684
             G
Sbjct: 757 VVG 759



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 205/446 (45%), Gaps = 39/446 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I   Y+ G      ES G +   DC+PDV  YN ++N   ++    +A+    E  K  
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN ++++ LI    KS + ++A K+L +M +RG  P+  TY I+I GL      D+A 
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            + +K+ D G SPD   YN L++G CK  R   A  L         +P    Y+ LIDG 
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R+  +DEA   +    E+ ++ DVV +  MI+G   +G + +A+  ++ M E  +VPD 
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + Y+ +I G+     +  A  +   + K    PN  T+T LI G C  G    A++ F +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615

Query: 404 MEKAGCFPSVGMFNALIDGLCK-AGELEKA-------------------NLL---FYKME 440
           M+     P+V  +  LI  L K +  LEKA                   N L   F K  
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKT 675

Query: 441 IGK---NP------------TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            GK    P              F R+   G   H  A+  + +   C  G++  A     
Sbjct: 676 SGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDH-AAAYNSALVCLCVHGMVKTACMFQD 734

Query: 486 QLAESGNLPDIITYNSLINGFCKVGN 511
           ++ + G  PD +++ ++++GFC VGN
Sbjct: 735 KMVKKGFSPDPVSFAAILHGFCVVGN 760



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 25/428 (5%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+    ++  L ++ ++ DA K+  +M +RG   D Y    L+KG C+ G ++  R L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
               W +  +PN   +  +I G C+ G +++A  +F +++  G  P++  F  +I+G CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 426 AGELEKANLLF----------------------YKMEIGKNPTLFLRLSQGGNRVHDKAS 463
            G+   ++ L                       Y+     +P   +      +   D A+
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++ + C  G    A   L + ++ G +P+ ++Y  LI  +CK    + A KL  ++ 
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            +G +PD VTYG LI+GL      +DA  +  ++   G +P  A+Y  LM+  C+  +F 
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467

Query: 584 LAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            A  L+ + L R+I          I+ F++ G+ + A +       K     +  +   +
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            G C+ G + EAL   + + E   +    +   +I G  K+  +  A+ +F Y  KN   
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK-- 585

Query: 703 LRPRVCNY 710
            +P V  Y
Sbjct: 586 CKPNVVTY 593



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 161/398 (40%), Gaps = 51/398 (12%)

Query: 19  EPALEPLLPF-LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           E + + L+P  LS   +     K+K   +  +  +  A+R       +   +I  L+   
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             D       +L    VS  + ++ +L+SG  K G    A   F +M + +  PD Y+Y 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   R   F  A  V+   V+     ++V  + +I G  +SG  + A+  ++ M + 
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            ++P+KFTY+ +I G  +      A ++F  M+ + C P+ V Y +L+NGFC       A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFR-AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
               +  +    VP + +Y+ LI  L + +   ++A  ++  M   K  P+ V +  +++
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669

Query: 317 G-------------------------------------------------LSEAGKVKDA 327
           G                                                 L   G VK A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
                 M ++G  PD   + A++ GFC +G   Q R++
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 226/422 (53%), Gaps = 13/422 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           +L +++ MV+   LP+I  FS L++ +SK  K +V I + ++M   GI  N  T  I+++
Sbjct: 65  SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ ++   A     KM   G  P  V + +LLNGFC+  RV +AL +       G+ P
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKP 184

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ +IDGL ++K+ D A     +M ++ I PDVV Y  +I GL  +G+  DA +++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMV 244

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S M +R I PD + +NALI      G + +A     E+ +R   P+  T+++LI G+C  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A+++F  M   GCFP V  ++ LI+G CK+ ++E    LF +M            
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM------------ 352

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V +  +   +++ YC AG ++ A +I  ++   G  P+IITYN L++G C  G 
Sbjct: 353 SQRG-VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I  AL +  ++Q  G+  D VTY  +I G+ +     DA+ I+  +   G  P    Y +
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471

Query: 572 LM 573
           +M
Sbjct: 472 MM 473



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 219/451 (48%), Gaps = 36/451 (7%)

Query: 99  DVFFVLISG--YYKVGDCEKALESFGKMKEFDCQPDVYIY-----------------NAV 139
           D+FF ++       + D  + L +  KMK++D    V IY                 N +
Sbjct: 67  DLFFHMVQCRPLPSIADFSRLLSAISKMKKYD----VVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           LN   R     LAL+   +M+KL   P+IVTF  L+NG  +  +   A+ M D+M   G 
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            PN   Y  +I GLC+  + D A  L  +M+  G  PD V YN+L++G C   R  +A  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           ++    K    P + +++ LID   +  R  EA  +Y +M    ++PD+V Y ++I GL 
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
              ++ +A ++   M  +G  PD   Y+ LI G+C    ++    L  E+ +R  + NT 
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+TILI G CR G ++ A+++F +M   G  P++  +N L+ GLC  G++EKA ++   M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        Q      D  +   ++   C AG +  A+ I   L   G +PDI TY
Sbjct: 423 -------------QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            +++ G  K G    A  LF++++  G+ P+
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 210/492 (42%), Gaps = 51/492 (10%)

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + D++  LF  M      P    ++ LL+   K+++ D  + L    +  G    L + +
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L++   R  +   A ++  KM +   EP +V +G ++ G     +V DA+ +   M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P+   YN +I G C    +D A  L   + K    P+  T+  LI G+C +G   DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            ++ + M K   +P V  FNALID   K G + +A   + +M         +R S     
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM---------IRRSLD--- 288

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   ++   C    + +A ++   +   G  PD++TY+ LING+CK   +   +K
Sbjct: 289 -PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF E+  +G+  ++VTY  LI G  R  +   A  IF +M   G  P+   Y  L+   C
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
                                               G++E A+  L +M     D  +  
Sbjct: 408 ----------------------------------DNGKIEKALVILADMQKNGMDADIVT 433

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP-SCVKLIHGLCKRGYLDLAMDVFLYT 696
           Y I + G+C+ G+V +A +I+  L  C+ ++    +   ++ GL K+G L    D     
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKG-LRREADALFRK 491

Query: 697 LKNGFILRPRVC 708
           +K   IL P  C
Sbjct: 492 MKEDGIL-PNEC 502



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 212/516 (41%), Gaps = 79/516 (15%)

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC  RR     +  R   ++G                R  + D++   +  M + +  P
Sbjct: 35  GFCFSRRAYSNGSDYREMLRNGI---------------RFMKLDDSLDLFFHMVQCRPLP 79

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +  +  ++  +S+  K    + L   M+  GI  +    N L+  FC    L  A S  
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ K    P+  TF  L+ G CR   V DA  +F++M   G  P+V ++N +IDGLCK+
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            +++ A  L  +ME  G  P              D  +  +++   C++G    A +++ 
Sbjct: 200 KQVDNALDLLNRMEKDGIGP--------------DVVTYNSLISGLCSSGRWSDATRMVS 245

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + +    PD+ T+N+LI+   K G ++ A + ++E+  + L PD VTY  LI GL    
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R ++A  +FG M   GC P    Y  L+   C+ +K                   +  MK
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV------------------EHGMK 347

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
              E  Q+G V N +                 YTI + G C+ G++  A  IF  +V C 
Sbjct: 348 LFCEMSQRGVVRNTV----------------TYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
                 +   L+HGLC  G ++ A+ +     KNG        N ++R +   K  +   
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM--CKAGEVAD 449

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
           A+ + C +   G             L+P  W    M
Sbjct: 450 AWDIYCSLNCQG-------------LMPDIWTYTTM 472



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 154/311 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D     L+ +    +      +  LISG    G    A      M +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  PDV+ +NA+++   ++     A   Y EM++ +  P+IVT+SLLI GL    + + 
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M   M  +G  P+  TY+I+I+G C+  + +   +LF +M   G   + V Y  L+ 
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C+  +++ A  + R     G  P + +Y+ L+ GL    + ++A      M +  ++ 
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y ++IRG+ +AG+V DA  +   +  +G++PD + Y  ++ G    GL  +A +L 
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489

Query: 367 VEIWKRDSLPN 377
            ++ +   LPN
Sbjct: 490 RKMKEDGILPN 500



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 6/167 (3%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K  + G + F   ++R  +R+  + + +I    +    ++  +    +    V     
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+ G    G  EKAL     M++     D+  YN ++    +      A  +Y   
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY--- 454

Query: 160 VKLNC---LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             LNC   +P+I T++ ++ GL K G    A  +  +M + GILPN+
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 246/461 (53%), Gaps = 29/461 (6%)

Query: 98  SDVFFVLISGYYKVG---DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           S  F  L++G+ K G   DCE+ LE+   M     QP+V  YN +L    + + +  A  
Sbjct: 10  SVTFNALVNGFSKQGRPGDCERLLET---MAARGIQPNVVSYNGLLEGLCKLERWHEAEE 66

Query: 155 VYYEMVKLN--CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +  +M+       P++VT+S L++G  K+GK E + ++L E+  RG+ P+   YT V++ 
Sbjct: 67  LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+  R  EA  L  +M  +GC P  + +N L++G C+ + ++ A +LL++    G    
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+ L+DGL +A R  EA     +M      PDVV Y   + GL ++GKV +A ++L 
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRN 391
            MR+    P+   YN ++ G C  G +D A  +  ++   D    N   ++ ++ G+C+ 
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G   +A+ +   M +AGC P V  +++L++GLCKAG++E+A     +M + G  P     
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP----- 361

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-----PDIITYNSLING 505
                    +  +  ++V   C+ G + +A +++ +++  G       P + TYN+LI G
Sbjct: 362 ---------NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGG 412

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            CK G I+ ALK F+ ++ +G  PD V+Y T++ GL R  R
Sbjct: 413 LCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 228/462 (49%), Gaps = 19/462 (4%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +  C PN VTF+ L+NG SK G+     ++L+ M  RGI PN  +Y  ++ GLC++ R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 219 ADEAYRLFLKMKDSG--CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             EA  L   M   G   +PD V Y+ LL+G+CK  +V+E+  LL+     G  P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + ++  L ++ R  EA     +M      P ++ +  +I G      ++ A  LL  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+  D   YN L+ G C  G L +A  L   +      P+   ++  + G+C++G V +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A ++  +M  +   P+V  +N ++DGLCK+G+++ A  +  +M       L +       
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV------- 293

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T+V+  C  G   +A  ++  +A +G  PD++TY+SL+NG CK G I  A+
Sbjct: 294 -----VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAV 348

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-----PQNGCTPSPAVYKS 571
           +  +E+ ++G +P++VTY +L++GL    R  +A R+  +M       + C PS + Y +
Sbjct: 349 EAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNA 408

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           L+   C+  +   A   + +        D  S  +I E L +
Sbjct: 409 LIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 184/397 (46%), Gaps = 47/397 (11%)

Query: 83  WQTLDEL------RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           W   +EL      R G  +     +  L+SGY K G  E++ E   ++     +PD  +Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             V+    +      AL +  EM++  C P ++TF+ LI+G  +    E+A  +L  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY--------------- 241
            G+  +  TY  ++ GLC+  R  EA +L  +MK SGC+PD VAY               
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 242 --------------------NALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLI 280
                               N +L+G CK  ++D AL ++      DG    +  YS ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL +  R  EA +    M      PDVV Y  ++ GL +AGK+++A++ + +M   G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-----PNTHTFTILICGMCRNGMVD 395
           P+   Y +L+ G C  G L +A  +  E+           P+  T+  LI G+C+ G +D
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           DA K F +M   GC P    ++ +++GL ++G   +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 6/302 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS   +    ++    L  + +  V      +  L+ G  K G  ++A +   +MK 
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV  Y++ +    +    L A  V  +M   +  PN+VT++ +++GL KSGK + 
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDT 275

Query: 187 AIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           A++M+++M +  G   N   Y+ V+ GLC++ R  EA  +   M  +GC PD V Y++L+
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM-----F 300
           NG CK  +++EA+  +R    +G  P   +Y  L+ GL    R  EA     +M      
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +   P V  Y  +I GL +AG++ DA+K    MR +G  PD   Y+ +++G    G   
Sbjct: 396 GDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455

Query: 361 QA 362
           QA
Sbjct: 456 QA 457



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 163/359 (45%), Gaps = 56/359 (15%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN+ TF  L+ G  + G   D ++L   M   G  P+V  +N L++GLCK     +A  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
              M           +S+GG    D  +  T++  YC AG + ++ ++L ++   G  PD
Sbjct: 68  VRDM-----------ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116

Query: 496 -----------------------------------IITYNSLINGFCKVGNINGALKLFK 520
                                              +IT+N+LI+G C+  N+  A  L +
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G++ D VTY TL++GL +  R ++A ++  +M  +GC P    Y S +   C+  
Sbjct: 177 TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSG 236

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLN-DFQLA 636
           K   A  + L+ +RD S  D   +     ++   + G+++ A++ + +M         + 
Sbjct: 237 KVLNAHQV-LEQMRD-SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            Y+  + GLC+ G+ +EA ++   +    C+  V   S   L++GLCK G ++ A++  
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYS--SLVNGLCKAGKIEEAVEAV 351


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 181/721 (25%), Positives = 326/721 (45%), Gaps = 77/721 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +++ Y K G C+ AL     M++   + D+Y YN +++   + +    A  +   M
Sbjct: 266 TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM 325

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++N  P+  +++ LI+G    GK  +AI + ++M ++ + P+  TYT +I G C+  R 
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA R+  +M+ +G  P  + Y+ALLNG+CK  ++  AL L++             Y+ L
Sbjct: 386 DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTIL 445

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  +     +A    + M  + I+PDV+ Y  +I G+ + G + +  ++LS M++ G+
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 505

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+   Y  L+  FC  G   +A    V+I++   + N+     L+C   R GM+ +A++
Sbjct: 506 LPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 565

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLS 452
               M +      V  FN +ID  C+ G + +A  ++  M       +I    +L   L 
Sbjct: 566 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 625

Query: 453 QGGNRVH---------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           QGG+ V                D+ +L T++   C  G + +A  +  ++     LPD  
Sbjct: 626 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 685

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL-------------QRV 544
           TY  L++GFCK G +  AL L + +  KGL PD++ Y  L+NGL             Q +
Sbjct: 686 TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 745

Query: 545 DREEDAF-----------------------RIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
             +E  +                       R+   M +N   PS A Y  LM    ++ +
Sbjct: 746 ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 805

Query: 582 FSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
            S    L+   +++    D+ + +  I    + G +E A++ L +M  +        + I
Sbjct: 806 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI 865

Query: 641 WLIGLCQDGQVKEALNIFSVL-------------VECKAIVTPPSCV---KLIHGLCKRG 684
            +    +  ++  AL +FS +              + KA+   PS V    ++ GLCK G
Sbjct: 866 LIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 925

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            ++ A+ VF   ++ G +  P +  +        K+ K   A+HL   M+S G  +D   
Sbjct: 926 KVEEAIIVFSSIMRAGMV--PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 983

Query: 745 Y 745
           Y
Sbjct: 984 Y 984



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 308/713 (43%), Gaps = 101/713 (14%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L  +R  N++     +  LI G++  G    A+  F +M     +P V  Y A+++   R
Sbjct: 322  LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  A  V YEM      P+ +T+S L+NG  K  K   A+ ++  +  R I  N+  
Sbjct: 382  NGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTM 441

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG------------------ 247
            YTI+I G CQ+    +A ++   M   G  PD + Y+AL+NG                  
Sbjct: 442  YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 501

Query: 248  -----------------FCKLRRVDEAL-------------------ALLRSFEKDGFVP 271
                             FCK     EAL                   ALL SF ++G + 
Sbjct: 502  KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 561

Query: 272  R----------------LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
                             + S++C+ID   +     EA++ Y  M      PD+  YG ++
Sbjct: 562  EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 621

Query: 316  RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            RGL + G +  A + +  + E+    D    N L+ G C  G LD+A  L  ++  R+ L
Sbjct: 622  RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 681

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            P+T+T+TIL+ G C+ G V  A  L   M + G  P    +  L++GL   G+++ A+ +
Sbjct: 682  PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 741

Query: 436  FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            F   EI     L+           D  +  +M+  Y   G I++  +++  + E+   P 
Sbjct: 742  F--QEIICKEGLY----------ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 789

Query: 496  IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              +YN L++G+ K G ++  L L++++  +G++PD+VTY  LI GL      E A +   
Sbjct: 790  SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 849

Query: 556  QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL--WLQYLRDISGRDD--ESMKS----- 606
            +M   G  P    +  L+     + K S A  L  +++++ DI G  +  E MK+     
Sbjct: 850  KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVP 909

Query: 607  --------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                    +    + G+VE AI     +        +A +T  + GLC++ ++ +A ++ 
Sbjct: 910  SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 969

Query: 659  SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             ++  C   V   +   LI GLC +  +  A+D++      G +  P +  Y+
Sbjct: 970  QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL--PNITTYI 1020



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 264/578 (45%), Gaps = 20/578 (3%)

Query: 129 CQP-DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           C P +++  + ++N   ++   L A A  + M +     ++ + + ++N L    K+E  
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS-PDFVAYNALLN 246
              L E   R    +  T  IV++ LC   +  +A  +  KMK+  C  P+ V YN +LN
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILN 272

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            + K  R   AL +L   EK+G    L +Y+ +ID L + KR   AY   ++M E  + P
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP 332

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D   Y  +I G    GK+  A+ + + M  + + P    Y ALI G+C  G  D+AR + 
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+      P+  T++ L+ G C++  +  A  L   +       +  M+  LIDG C+ 
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           GE+ KA  +L   +  G +P              D  +   ++   C  G+IH+  +IL 
Sbjct: 453 GEVSKAKQILKCMLADGIDP--------------DVITYSALINGMCKMGMIHETKEILS 498

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ +SG LP+ + Y +L+  FCK G+   ALK F ++   GL  +SV +  L+    R  
Sbjct: 499 RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREG 558

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
              +A +    M +   +   A +  ++   C+R     AFS++   +R     D  +  
Sbjct: 559 MIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYG 618

Query: 606 SIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           S+   L Q G +  A + ++ +  K            L+G+C+ G + EAL++   +V  
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR 678

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +    +   L+ G CKRG +  A+ +    L+ G +
Sbjct: 679 NILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLV 716



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 219/484 (45%), Gaps = 34/484 (7%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            F  +I  Y + G+  +A   +  M      PD+  Y ++L    +    + A      ++
Sbjct: 582  FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 641

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +  C  +  T + L+ G+ K G  + A+ + ++M  R ILP+ +TYTI++ G C+  +  
Sbjct: 642  EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 701

Query: 221  EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRLGSYSCL 279
             A  L   M + G  PD +AY  LLNG     +V  A  + +    K+G      +Y+ +
Sbjct: 702  PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 761

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            ++G  +  + +E     R M E ++ P    Y +++ G  + G++   + L  DM + GI
Sbjct: 762  MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 821

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             PD   Y  LI G C+ GL++ A     ++      P+   F ILI        + +A +
Sbjct: 822  KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 881

Query: 400  LFN----------------KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIG 442
            LF+                 M+  G  PS    ++++ GLCK G++E+A ++F   M  G
Sbjct: 882  LFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 941

Query: 443  KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNS 501
              PT+              A+  T++   C    I  A+  L QL ES  L  D++TYN 
Sbjct: 942  MVPTI--------------ATFTTLMHGLCKEFKIDDAFH-LKQLMESCGLKVDVVTYNV 986

Query: 502  LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            LI G C    I  AL L++E++ KGL P+  TY TL   +      +D  ++   +   G
Sbjct: 987  LITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046

Query: 562  CTPS 565
              PS
Sbjct: 1047 IVPS 1050



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 145/337 (43%), Gaps = 21/337 (6%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  +  +L+    + G V DA      M++ G   S+   N +++ L             
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNAL------------- 205

Query: 437 YKMEIGKNPTLFLRLSQGGNRVH--DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             + I K+  ++L L +  +R    D  +   ++   CT G + KA  +L ++ ++  LP
Sbjct: 206 --VGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLP 262

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + +TYN+++N + K G    AL++  +++  G+  D  TY  +I+ L ++ R   A+ + 
Sbjct: 263 NAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLL 322

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M +   TP    Y +L+       K +LA  ++ Q LR        +  + I+ + + 
Sbjct: 323 KRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRN 382

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G  + A + L EM           Y+  L G C+  ++  AL++   L      +     
Sbjct: 383 GRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMY 442

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             LI G C+ G +  A  +    L +G  + P V  Y
Sbjct: 443 TILIDGFCQLGEVSKAKQILKCMLADG--IDPDVITY 477



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            ++ G  K G  E+A+  F  +      P +  +  +++   ++  F +  A + + +  +
Sbjct: 917  IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE--FKIDDAFHLKQLMES 974

Query: 164  C--LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
            C    ++VT+++LI GL        A+ + +EM  +G+LPN  TY  +   +       +
Sbjct: 975  CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 1034

Query: 222  AYRLFLKMKDSGCSPDF 238
              +L   ++D G  P +
Sbjct: 1035 GEKLLKDIEDRGIVPSY 1051


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 297/635 (46%), Gaps = 53/635 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K+ +   A + F  M +  C  +   Y  +++          AL ++++M +  
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P++ T+++L+    + GK   A+K  +EM + GI PN +TYT++I   C++ + DE  
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M + G     V +NAL++G+CK   +++A+ +L S + +   P   +Y+ LI G 
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R K  D A A   KM+E K+ P++V Y  +I GL +A  V  A +L   M + G VPD 
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             + A I   C +G ++QA  +   + ++ +  N   +T LI G C+     DA  LF +
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL---------FLRLS- 452
           M   GCFP+   FN L+DGL K G++E A  L   M +    PT+          LR S 
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 453 -QGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
               N   D+           +    ++ YC  G + +A ++++++ E G L D   Y+ 
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL--QRVDRE------------ 547
           L+N +  +G ++ A  +   +   G  P   TY  L+  L  ++ ++E            
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710

Query: 548 ------------EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
                       E    +F +M + GC P+   Y  L+   C+    SLAF L+  ++++
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF-NHMKE 769

Query: 596 --ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVK 652
             IS  ++     +    + G  E A++ LL+   + N    L  Y + + GL + G  +
Sbjct: 770 SGISPSENIHNSLLSSCCKLGMHEEALR-LLDSMMEYNHLAHLESYKLLVCGLFEQGNQE 828

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           +A  IF  L+ C           L+ GL ++GY+D
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVD 863



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 179/706 (25%), Positives = 314/706 (44%), Gaps = 67/706 (9%)

Query: 20  PALEPLLPFLSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           P+   L+P L+ T ++S+      +P     FF W   +        +   +  +L  NG
Sbjct: 58  PSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNG 117

Query: 79  FDLYWQTLDELRSGNV-SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           F    +  + +R+  + S VS                 +A      +   +    V  YN
Sbjct: 118 F---LRAAENVRNSMIKSCVSS---------------HEARFVLNLLTHHEFSLSVTSYN 159

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +  +  R  L      ++ +M+     PN+++F+ ++N   K G   VA      + + 
Sbjct: 160 RLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKF 219

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G   + FTYT +I G C+I+   +AY++F  M   GC  + V+Y  L++GFC++ ++DEA
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L    ++DG  P + +Y+ L+       +  EA  ++ +M E  IEP+V  Y V+I  
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDY 339

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+ + M++LS M E+G+V     +NALI G+C  G+++ A  +   +      PN
Sbjct: 340 FCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
           + T+  LICG CR   +D A  L NKM +    P++  +N LI GLCKA  ++ A  L +
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
            M           +  G   V D+ +    ++  C  G + +A+++   L E     +  
Sbjct: 460 LM-----------IKDG--FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            Y +LI+G+CK    + A  LFK +  +G  P+S+T+  L++GL++  + EDA  +   M
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            +    P+   Y  L                                  IEE L++ + +
Sbjct: 567 GKFDAKPTVHTYTIL----------------------------------IEEILRESDFD 592

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
            A   L +M        +  YT ++   C+ G++ EA  +   + E   ++       L+
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
           +     G LD A  V +     G     +  + LL+ L+F K NK+
Sbjct: 653 NAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKE 698



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 41/505 (8%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            LD ++   V   S  +  LI G+ +    ++A+    KM E    P++  YN +++   
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLC 446

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           + ++   A  +++ M+K   +P+  TF   I+ L K GK E A ++ + + ++    N+F
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            YT +I G C+  +  +A+ LF +M   GC P+ + +N LL+G  K  +V++A++L+   
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            K    P + +Y+ LI+ + R   +D A  +  +M     +P+VV Y   I+     G++
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A +++  ++E GI+ D++ Y+ L+  +  +G LD A  + + ++     P+  T++IL
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686

Query: 385 ICGMC-----RNGM----------VDDAQ-----------KLFNKMEKAGCFPSVGMFNA 418
           +  +      + GM          VD+A             LF KM + GC P+V  ++ 
Sbjct: 687 LKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSK 746

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LI GLCK   L  A  LF  M E G +P+           +H+     +++   C  G+ 
Sbjct: 747 LIKGLCKVEHLSLAFRLFNHMKESGISPS---------ENIHN-----SLLSSCCKLGMH 792

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A ++L  + E  +L  + +Y  L+ G  + GN   A ++F+ L   G   D V +  L
Sbjct: 793 EEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVL 852

Query: 538 INGLQRVDREEDAFRIFGQMPQNGC 562
           ++GL R    ++  ++   M + GC
Sbjct: 853 LDGLVRKGYVDECSQLRDIMEKTGC 877



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 244/541 (45%), Gaps = 49/541 (9%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           +Y  +   L +    DE   LF  M + G  P+ +++N ++N  CK+  V  A A     
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            K GF     +Y+ LI G  +     +AY  +  M +E    + V Y  +I G  E GK+
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A++L   M+E G  PD   Y  L+  FC++G   +A     E+ +    PN +T+T+L
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I   C+ G +D+  ++ + M + G   SV  FNALIDG CK G +E A  +   M++ K 
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK- 395

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                          +  +   ++  +C    + +A  +L ++ E+   P+++TYN+LI+
Sbjct: 396 ------------VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH 443

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G CK   ++ A +L   +   G  PD  T+   I+ L ++ + E A ++F  + +     
Sbjct: 444 GLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEA 503

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           +  +Y +L+   C+  KFS A  L+                  +  L +G   N+I    
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLF------------------KRMLFEGCFPNSI---- 541

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        + + L GL ++G+V++A+++  V+ +  A  T  +   LI  + +  
Sbjct: 542 ------------TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRES 589

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
             D A       + +G   +P V  Y      + +  + + A  ++ ++K  G  LD+ +
Sbjct: 590 DFDRANMFLDQMISSG--CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647

Query: 745 Y 745
           Y
Sbjct: 648 Y 648


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 182/657 (27%), Positives = 310/657 (47%), Gaps = 51/657 (7%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           L+ L P L    V  ++   K+ +   +FF W +KR   +   + +  ISML +    D 
Sbjct: 66  LKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKH--NMNCFISMLNRLVR-DR 122

Query: 82  YWQTLDELR---------SGNVSVVSDVFFVLISGY---YKVGDC-------------EK 116
            +   D +R            +  V+D F   ISG    + +  C             E 
Sbjct: 123 VFAPADHIRILMIKACRNEEEIRRVAD-FLNEISGMGFGFSLYSCNTLLIQLAKFEMVEG 181

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A   + +M     QP +  +N ++NI  +K     A  +  ++ + +  P++ T++ LI 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  ++   ++A  + D M + G  PN  TY+ +I+GLC   R DEA  +  +M + G  P
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEP 301

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               Y   +   C +   +EA+ L+   +K G  P + +Y+ LI GL R  + + A   Y
Sbjct: 302 TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLY 361

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM +E + P+ V Y  +I  L   G+   A+K+   M   G + +T  YN +IKG C  
Sbjct: 362 HKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLG 421

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +++A  L  ++ K   LP   T+  LI G    G V++A +L + M++ GC P    +
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N L+ G  K G+LE A+  F +M E G NP              +  S   +++ +   G
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNP--------------NPVSYTALIDGHSKDG 527

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A  +L ++ E G  P++ +YN++ING  K    + A K+  ++  +GL P+ +TY 
Sbjct: 528 KVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           TLI+GL R  R + AF+IF  M +  C P+   Y SL+   C+  K   A  L  +  R 
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647

Query: 596 ISGRDDESMKS-IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
               D+ +  S I+ F+  G +++A   ++ +++M  K N      Y++ L GL ++
Sbjct: 648 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN---YRTYSVLLKGLQKE 701



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/581 (29%), Positives = 273/581 (46%), Gaps = 80/581 (13%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           +LLI  L+K    E A  +  +M   GI P+  T+  +I+ L +  +  EA  +  ++  
Sbjct: 168 TLLIQ-LAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
              SPD   Y +L+ G C+ R +D A  +     K+G  P   +YS LI+GL    R DE
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A     +M E+ IEP V  Y + I  L      ++A++L++ M++RG  P+   Y ALI 
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G   LG L+ A  L  ++ K   +PNT T+  LI  +C  G    A K+F+ ME  G   
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   +N +I GLC  G++EKA +LF KM ++G  PT+               +  T++  
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV--------------VTYNTLING 452

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           Y T G ++ A ++L  + E+G  PD  TYN L++GF K G +  A   F+E+   GL P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V+Y  LI+G  +  + + A  +  +M + GC P+   Y +++    +  +FS       
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS------- 565

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                      E+ K  ++ +++G + N I                 YT  + GLC++G+
Sbjct: 566 -----------EAEKICDKMVEQGLLPNVIT----------------YTTLIDGLCRNGR 598

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD-------------LAMDVFLYT- 696
            + A  IF  + + K +    +   LI+GLC+ G  D             LA D   +T 
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           L +GF++  R+                 HA+ LL RM  +G
Sbjct: 659 LIDGFVVLGRI----------------DHAFLLLRRMVDMG 683


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 251/489 (51%), Gaps = 16/489 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G Y  G    A   F +M   D  PDV  +N VL+   +K   + + A+  ++
Sbjct: 178 AYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKV 237

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K     N  T ++ I GL + G+ E A+ +++ M    + P+  TY  ++ GLC+ ++ 
Sbjct: 238 LKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKV 296

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +   +M + GC PD   YN +++G+CK   + EA  LL+     GFVP   +Y  L
Sbjct: 297 QEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSL 356

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL      + A   + +   + ++PD+V+Y  +++GL   G +  A++++++M E G 
Sbjct: 357 INGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGC 416

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + YN +I G C +G +  A  +  +   +  LP+  TF  LI G C+   +D A +
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           L  +M   G  P V  +N++++GLCKAG+ ++ N  F +M + G  P             
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAI---------- 526

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++E +C    + +A  +++++ + G +PD +++N+LI+GFC+ G+++GA  L
Sbjct: 527 ----TYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F++L  KG    + T+  LI         + A +IFG+M   G  P    Y+ L+   C+
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCK 642

Query: 579 RRKFSLAFS 587
                 A++
Sbjct: 643 AANVDRAYA 651



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 298/655 (45%), Gaps = 18/655 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++   I  Y + G    A+++F +M  F C P    YNA+++          A  VY  M
Sbjct: 73  LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM 132

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P+  T ++ +     +G+  VA+++L  +++RG       Y  V+ GL      
Sbjct: 133 LAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHG 192

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +M      PD   +N +L+  C+   V E+ ALL    K G      + +  
Sbjct: 193 YNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIW 252

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    R +EA A   +M    + PDVV Y  ++RGL +  KV++A + L  M  +G 
Sbjct: 253 IRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD + YN +I G+C  G+L +A  L  +   +  +P+  T+  LI G+C  G ++ A +
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           LFN+ +     P + ++N+L+ GLC+ G +  A  +  +M E G +P ++          
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIW---------- 421

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++   C  G I  A  ++      G LPD+ T+N+LI+G+CK   ++ AL+L
Sbjct: 422 ----TYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQL 477

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            + +   G+ PD +TY +++NGL +  + ++    F +M   GC P+   Y  L+   C+
Sbjct: 478 VERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCK 537

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             +   A  + ++  +D    D  S  + I  F + G+++ A     ++D K        
Sbjct: 538 INQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADT 597

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           + I +        ++ A  IF  ++         +   L+ GLCK   +D A       +
Sbjct: 598 FNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMI 657

Query: 698 KNGFILRPRVCNYLLRSLLFS-KDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
             GF+        +L  L  + + ++ V   H++ RM  V   +D  L    K +
Sbjct: 658 SKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEI 712



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 265/592 (44%), Gaps = 57/592 (9%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA--YNALLNGFCKLRRVDEALALLR 262
            Y  +I  L    R D+        + S  +PD +   Y A +  + +  R+  A+    
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASAR-SHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             +     P   +Y+ ++D L  A  +D+A+  Y +M    + PD   + V ++     G
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +   A++LL  + ERG       Y  +++G    G    AR L  E+  RD  P+  TF 
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-- 440
            ++  +C+ G V ++  L  K+ K G   +    N  I GLC+ G LE+A  L  +M   
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 441 IGKNPTLFLRLSQG---GNRVHDKA----------------SLQTMVEQYCTAGLIHKAY 481
           +  +   +  L +G    ++V + A                +  T+++ YC +G++ +A 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++L      G +PD +TY SLING C  G+I  AL+LF E Q K L+PD V Y +L+ GL
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF-----SLWLQYLRDI 596
            R      A ++  +M + GC P    Y  ++   C+    S A      ++   YL D+
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVK 652
              +      I+ + ++ ++++A+Q L+E   ++  + +AP    Y   L GLC+ G+ K
Sbjct: 456 FTFN----TLIDGYCKRLKLDSALQ-LVE---RMWTYGIAPDVITYNSVLNGLCKAGKAK 507

Query: 653 EALNIFS--VLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           E    F   +L  C+     P+ +    LI   CK   L+ A  V +   ++G +     
Sbjct: 508 EVNETFEEMILKGCR-----PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTR 759
            N L+    F ++     AY L  ++   GY   A     T ++L G ++++
Sbjct: 563 FNTLIHG--FCRNGDLDGAYLLFQKLDEKGYSATA----DTFNILIGAYSSK 608



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +G  L +Q LDE      S  +D F +LI  Y    + + A + FG+M     +PD+Y Y
Sbjct: 577 DGAYLLFQKLDE---KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTY 633

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             +++   +      A A   EM+    +P++ TF  ++N L+ + +   A+ ++  M +
Sbjct: 634 RILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVR 693

Query: 197 RGILP 201
            G++P
Sbjct: 694 MGVVP 698


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 240/484 (49%), Gaps = 17/484 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY K G+ ++  +   +M+   C+ DV  YNA++N   +      A   +  M
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   + N+VTFS  ++   K G    A+K+  +M  RG+  N+FTYT +I G C+  R 
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L  +M   G   + V Y  L++G CK R+V EA  +LR  EK G       Y+ L
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G F  K  ++A     +M  + +E D+ LYG +I+GL    K+ +A  LL+ M E G+
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  ++      G + +A ++  +I      PN  T+  LI G+C+ G +D+A  
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            FNKM   G  P+V  + AL+DGLCK G L +A  LF +M + K  +L            
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM-VHKGMSL------------ 571

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           DK     +++ Y   G +H A+ +  ++ +SG   D+  Y   I+GFC +  +  A ++F
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 631

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ--NGCTPSPAVYK--SLMTW 575
            E+   G+ PD   Y  LI+  Q++   E+A  +  +M +    CT S       S+ T 
Sbjct: 632 SEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTATDAGSVCTT 691

Query: 576 SCRR 579
            C R
Sbjct: 692 KCIR 695



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 238/480 (49%), Gaps = 50/480 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+V+ +N V++   ++     A +++  M ++ CLP++VTF+ LI+G  K G+ +   ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           ++EM + G   +  TY  +I+  C+  R + AY  F  MK  G   + V ++  ++ FCK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              V EA+ L       G      +Y+CLIDG  +A R D+A     +M  + +  +VV 
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 311 YGVMIRGLSEAGKVKD-----------------------------------AMKLLSDMR 335
           Y V++ GL +  KV +                                   A+ LLS+M+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G+  D   Y ALI+G C++  LD+A+SL  ++ +    PN   +T ++    ++G V 
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           +A  +  K+  +G  P+V  + ALIDGLCKAG +++A   F KM ++G +P +       
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV------- 538

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +   +V+  C  G +++A ++  ++   G   D + Y +L++G+ K GN++ 
Sbjct: 539 -------QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  L  ++   GL+ D   Y   I+G   ++   +A  +F +M  +G  P  AVY  L++
Sbjct: 592 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 255/529 (48%), Gaps = 18/529 (3%)

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           + + +L++   + L   A+     + +L   PN  T + ++  L++     +  ++ +++
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
                 PN FT+ IVI  LC+     EA  LF +MK+ GC PD V +N+L++G+ K   +
Sbjct: 184 PA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DE   L+    + G    + +Y+ LI+   +  R + AY ++  M  E +  +VV +   
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +    + G V++AMKL + MR RG+  + + Y  LI G C  G LD A  L  E+ ++  
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             N  T+T+L+ G+C+   V +A+ +   MEKAG   +  ++  LI G       EKA  
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L  +M   KN  L L +S  G           +++  C    + +A  +L ++ ESG  P
Sbjct: 420 LLSEM---KNKGLELDISLYG----------ALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + I Y ++++   K G +  A+ + +++   G +P+ +TY  LI+GL +    ++A   F
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M   G  P+   Y +L+   C+    + A  L+ + +      D     + ++ +L++
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           G + +A     +M        L  YT ++ G C    + EA  +FS ++
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 15/446 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D   Q ++E+R          +  LI+ + K G  E A   F  MK      +V  ++ 
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
            ++   ++ L   A+ ++ +M       N  T++ LI+G  K+G+ + AI +LDEM ++G
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  N  TYT+++ GLC+  +  EA  +   M+ +G   + + Y  L++G    +  ++AL
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL   +  G    +  Y  LI GL    + DEA +   KM E  +EP+ ++Y  M+   
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            ++GKV +A+ +L  + + G  P+   Y ALI G C  G +D+A S   ++      PN 
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +T L+ G+C+NG +++A +LFN+M   G      ++ AL+DG  K G L  A  L  K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598

Query: 439 M-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M + G    LF                   +  +C   ++ +A ++  ++   G  PD  
Sbjct: 599 MIDSGLQLDLF--------------CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644

Query: 498 TYNSLINGFCKVGNINGALKLFKELQ 523
            YN LI+ + K+GN+  A+ L  E++
Sbjct: 645 VYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 230/522 (44%), Gaps = 53/522 (10%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R   ++++    P+    N +L    +L R D +  L+R   +    P + +++ +
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHIL---LRLAR-DRSGRLVRRLFEQLPAPNVFTFNIV 194

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L +     EA + + +M E    PDVV +  +I G  + G++ +  +L+ +MR  G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YNALI  FC  G ++ A      + +   + N  TF+  +   C+ G+V +A K
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF +M   G   +   +  LIDG CKAG L+ A +L  +M     P              
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------------- 361

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +   +V+  C    + +A  +L  + ++G   + + Y +LI+G     N   AL L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E++ KGL  D   YG LI GL  V + ++A  +  +M ++G  P+  +Y ++M  +C +
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD-ACFK 480

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                            SG+  E++  +++ L  G   N I                 Y 
Sbjct: 481 -----------------SGKVPEAIAMLQKILDSGFQPNVIT----------------YC 507

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + GLC+ G + EA++ F+ + +        +   L+ GLCK G L+ A+ +F   +  
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           G  L   V   LL   L  K      A+ L  +M   G  LD
Sbjct: 568 GMSLDKVVYTALLDGYL--KQGNLHDAFALKAKMIDSGLQLD 607



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 165/352 (46%), Gaps = 4/352 (1%)

Query: 59  RLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R+R  A N    + L+    K    D     LDE+    V +    + VL+ G  K    
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            +A +    M++   + +  +Y  +++  F  +    AL +  EM       +I  +  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I GL    K + A  +L +M + G+ PN   YT ++    +  +  EA  +  K+ DSG 
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ + Y AL++G CK   +DEA++        G  P + +Y+ L+DGL +    +EA  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + +  D V+Y  ++ G  + G + DA  L + M + G+  D +CY   I GFC
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           +L ++ +AR +  E+      P+   +  LI    + G +++A  L ++ME+
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER 671



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 163/416 (39%), Gaps = 91/416 (21%)

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + L+    D GLLD A      + +    PNT T   ++  + R+      ++LF ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
               P+V  FN +ID L                                           
Sbjct: 186 ----PNVFTFNIVIDFL------------------------------------------- 198

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
                C  G + +A  +  ++ E G LPD++T+NSLI+G+ K G ++   +L +E++  G
Sbjct: 199 -----CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            + D VTY  LIN   +  R E A+  F  M + G   +   + + +   C+        
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK-------- 305

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                      G   E+MK   +   +G               LN+F    YT  + G C
Sbjct: 306 ----------EGLVREAMKLFAQMRVRG-------------MALNEFT---YTCLIDGTC 339

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G++ +A+ +   +V     +   +   L+ GLCK   +  A DV     K G      
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
           +   L+     +K+++K  A  LL  MK+ G +LD  LY    +L+ G  N  +++
Sbjct: 400 LYTTLIHGHFMNKNSEK--ALGLLSEMKNKGLELDISLY---GALIQGLCNVHKLD 450


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 271/565 (47%), Gaps = 22/565 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +++GY + G   +   +          P+ Y Y  ++     +     ALAV  +M 
Sbjct: 82  YNAMVAGYCRAG---QLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C P    + + +    ++     A+ +L ++  RG   +     +V+  +C     D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 221 EAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           EA RL   +  S GC PD V+YNA+L G C  RR      L+      G  P + ++S L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L R   ++  +  + +M E    PDV +Y  +I G+ +  +++ A  +L+ M   G+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+  CYN L+KG C     ++A  L  E++ +D   +  TF IL+  +C+NG+VD   +
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +  +M + GC P V  +  +I+G CK G +++A +L   M   G  P             
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP------------- 425

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  S   +++  C+A     A +++ Q+ + G  P+ +T+N+LIN  CK G +  A++L
Sbjct: 426 -NTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 484

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            K++ + G  PD ++Y T+I+GL +    ++A  +   M + G +P+  +Y S+ +    
Sbjct: 485 LKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSG 544

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             + +    ++ + ++D + R D  + +  I    ++GE + AI+ L  M         +
Sbjct: 545 EGRINKVIQMF-ENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNES 603

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVL 661
            YTI + GL  +G VKEA  I + L
Sbjct: 604 TYTILIRGLASEGFVKEAQEILTEL 628



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/563 (26%), Positives = 250/563 (44%), Gaps = 51/563 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  T+  L+  L   G+   A+ +LD+M +RG  P    Y + +   C+ +    A  +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              +   GC+ D    N +L   C    VDEA+ LLR          L S+ C       
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDL--------LPSFGC------- 213

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              EPDVV Y  ++RGL  A +      L+ +M   G  P+   
Sbjct: 214 -------------------EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVT 254

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           ++ LI   C  GL ++   +  ++ +    P+   +  +I G+C+   ++ A+ + N+M 
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N L+ GLC A   E+A  L  +M     P              D  +  
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL-------------DDVTFN 361

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+  C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G I+ A+ L + +   
Sbjct: 362 ILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G RP++V+Y  ++ GL   +R  DA  +  QM Q GC P+P  + +L+ + C++     A
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G  + A++ L  M  K        Y+     
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASA 541

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L  +G++ + + +F  + +            +I  LCKRG  D A++   Y + +G +  
Sbjct: 542 LSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPN 601

Query: 705 PRVCNYLLRSLL---FSKDNKKV 724
                 L+R L    F K+ +++
Sbjct: 602 ESTYTILIRGLASEGFVKEAQEI 624



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 213/452 (47%), Gaps = 22/452 (4%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           +  F C+PDV  YNAVL      + +     +  EMV   C PNIVTFS LI  L ++G 
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E   ++  +M + G  P+   Y  +I G+C+  R + A  +  +M   G SP+ V YN 
Sbjct: 268 FERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNT 327

Query: 244 LLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           LL G C   R +EA  LL   F+KD  +  + +++ L+D L +    D       +M E 
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDV-TFNILVDFLCQNGLVDRVIEVLEQMLEH 386

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PDV+ Y  +I G  + G + +A+ LL  M   G  P+T  Y  ++KG C       A
Sbjct: 387 GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDA 446

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++ ++   PN  TF  LI  +C+ G+V+ A +L  +M   GC P +  ++ +IDG
Sbjct: 447 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 506

Query: 423 LCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           L KAG  ++A  LL   ++ G +P   +                ++       G I+K  
Sbjct: 507 LGKAGNTDEALELLNVMVKKGMSPNTII--------------YSSIASALSGEGRINKVI 552

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++   + ++    D + YN++I+  CK G  + A++    +   G  P+  TY  LI GL
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
                 ++A  I  ++   G     A+ K LM
Sbjct: 613 ASEGFVKEAQEILTELCSKG-----ALRKHLM 639



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++    L+ + S  +S     +  L+ G       E+A     +M +
Sbjct: 291 ATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFD 350

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + V  +M++  C+P+++T++ +ING  K G  + 
Sbjct: 351 KDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDE 410

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M   G  PN  +YTIV+ GLC   R  +A  L  +M   GC P+ V +N L+N
Sbjct: 411 AVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLIN 470

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A   DEA      M ++ + P
Sbjct: 471 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSP 530

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G++   +++  ++++  +  D   YNA+I   C  G  D+A    
Sbjct: 531 NTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFL 590

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+TILI G+   G V +AQ++  ++   G
Sbjct: 591 AYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 186/394 (47%), Gaps = 15/394 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI    + G  E+  E   +M E  C PDV +Y  +++   +++   +A  +   M 
Sbjct: 255 FSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMP 314

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                PN+V ++ L+ GL  + + E A  +L EM  +    +  T+ I++  LCQ    D
Sbjct: 315 SYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVD 374

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
               +  +M + GC PD + Y  ++NGFCK   +DEA+ LLRS    G  P   SY+ ++
Sbjct: 375 RVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVL 434

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL  A+R+ +A     +M ++   P+ V +  +I  L + G V+ A++LL  M   G  
Sbjct: 435 KGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y+ +I G    G  D+A  L   + K+   PNT  ++ +   +   G ++   ++
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           F  ++         ++NA+I  LCK GE ++A   L Y +  G  P              
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVP-------------- 600

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           ++++   ++    + G + +A +IL +L   G L
Sbjct: 601 NESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 198/481 (41%), Gaps = 20/481 (4%)

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++ G  RA +   A      +    + P+   Y  ++R L   G++ DA+ +L DM 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            RG  P    Y+  ++  C       A  +  ++  R    +     +++  +C  G VD
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 396 DAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           +A +L   +  + GC P V  +NA++ GLC A        L  +M     P   +  S  
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS-- 256

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                      T++   C  GL  + +++  Q+AE G  PD+  Y ++I+G CK   +  
Sbjct: 257 -----------TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  +   +   GL P+ V Y TL+ GL   DR E+A  +  +M    C      +  L+ 
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDF 633
           + C+         +  Q L      D  +  + I  F ++G ++ A+  L  M       
Sbjct: 366 FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP 425

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
               YTI L GLC   +  +A  + S +++      P +   LI+ LCK+G ++ A+++ 
Sbjct: 426 NTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 485

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLP 753
              L NG    P + +Y        K      A  LL  M   G   +  +Y    S L 
Sbjct: 486 KQMLVNG--CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALS 543

Query: 754 G 754
           G
Sbjct: 544 G 544


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 285/600 (47%), Gaps = 17/600 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I + L+ +  D  +    E+ +    +             K G C  AL    K +E
Sbjct: 209 NALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK-EE 267

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F   PD   YN +++      LF  A+ +   M  ++C+PN+VT+ +L++G    G+   
Sbjct: 268 F--VPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGR 325

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             ++L  M   G  PN+  +  ++   C+      AY+LF KM   GC P ++ YN  + 
Sbjct: 326 CKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIG 385

Query: 247 GFCKLRRVDEALALLRSFEKD-------GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
             C    +  +  LL   EK        G V    + S     L  A ++D+A+    +M
Sbjct: 386 SICSNEELPGS-DLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEM 444

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             +   PD   Y  +I  L +A KV+ A  L  +M++ GIVP  Y Y  LI  FC  GL+
Sbjct: 445 MSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLI 504

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            QAR+   E+ + +  PN  T+T LI    +   V DA KLF  M   G  P+V  + AL
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTAL 564

Query: 420 IDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           IDG CKAG+++KA  ++ +M+      +  ++ +L        +  +   +V+  C A  
Sbjct: 565 IDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANR 624

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A+++L  ++ +G  P+ I Y++LI+GFCK G +  A ++F ++  +G  P+  TY +
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS 684

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LIN L +  R +   ++  +M +N CTP+  +Y  ++   C+  K   A+ L L+ + ++
Sbjct: 685 LINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLK-MEEV 743

Query: 597 SGRDD--ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               +       I+ F + G++E  ++   +M  K        Y + +   C  G + EA
Sbjct: 744 GCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEA 803



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 251/518 (48%), Gaps = 35/518 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI  L   +  +  +   +E++   +      + +LI  + K G  ++A   F +
Sbjct: 454 STYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDE 513

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M   +C P+V  Y ++++   + +    A  ++  M+     PN+VT++ LI+G  K+G+
Sbjct: 514 MLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQ 573

Query: 184 TEVAIKMLDEMTQRGI-----------------LPNKFTYTIVISGLCQINRADEAYRLF 226
            + A ++   M Q  I                  PN  TY  ++ GLC+ NR +EA+ L 
Sbjct: 574 IDKACQIYARM-QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELL 632

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M  +GC P+ + Y+AL++GFCK  +++ A  +     + G+ P L +YS LI+ LF+ 
Sbjct: 633 DTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKE 692

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           KR D       KM E    P+VV+Y  MI GL + GK ++A +L+  M E G  P+   Y
Sbjct: 693 KRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITY 752

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            A+I GF  +G ++Q   L  ++  +   PN  T+ +LI   C  G++D+A +L ++M++
Sbjct: 753 TAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                 +  +  +I+G              +  E   +  L   LS+    V  ++  + 
Sbjct: 813 TYWPRHISSYRKIIEG--------------FNREFITSIGLLDELSE-NESVPVESLYRI 857

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNL--PDIITYNSLINGFCKVGNINGALKLFKELQL 524
           +++ +  AG +  A  +L +++ S +L   +   Y SLI        ++ A +L+  +  
Sbjct: 858 LIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMIN 917

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           K + P+  T+  LI GL RV + ++A ++   + Q  C
Sbjct: 918 KNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVC 955



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 252/593 (42%), Gaps = 47/593 (7%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            + LI    ++G   VA++ L  +   G   +  TY  +I    + ++ D A+ +  +M 
Sbjct: 173 LNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMS 232

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           +SG   D           CK  R  +AL+LL   EK+ FVP    Y+ ++ GL  A  + 
Sbjct: 233 NSGFRMDGCTLGCFAYSLCKAGRCGDALSLL---EKEEFVPDTVFYNRMVSGLCEASLFQ 289

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA     +M      P+VV Y +++ G    G++    ++LS M   G  P+   +N+L+
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN------GMVDDAQKLFNKM 404
             +C       A  L  ++ K    P    + I I  +C N       +++ A+K +++M
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEM 409

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
              G   +    +     LC AG+ +KA  +  +M           +S+G   V D ++ 
Sbjct: 410 LDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEM-----------MSKG--FVPDDSTY 456

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C A  + KA+ +  ++ ++G +P + TY  LI+ FCK G I  A   F E+  
Sbjct: 457 SKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLR 516

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
               P+ VTY +LI+   +  +  DA ++F  M   G  P+   Y +L+   C+  +   
Sbjct: 517 DNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDK 576

Query: 585 AFSLWLQYLRDISGR--------DDESMKS---------IEEFLQKGEVENAIQGLLEMD 627
           A  ++ +   DI           DD   ++         ++   +   VE A + L  M 
Sbjct: 577 ACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMS 636

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE---CKAIVTPPSCVKLIHGLCKRG 684
               +     Y   + G C+ G+++ A  +F  + E   C  + T  S   LI+ L K  
Sbjct: 637 VNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS---LINSLFKEK 693

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            LDL + V    L+N     P V  Y        K  K   AY L+ +M+ VG
Sbjct: 694 RLDLVLKVLSKMLENS--CTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG 744



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 159/341 (46%), Gaps = 26/341 (7%)

Query: 1   ESSTLNEVLTILDTVT-----PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAA 55
           +++ + E   +LDT++     P +   + L+    KT       K +N Q     F+  +
Sbjct: 621 KANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG------KLENAQ---EVFVKMS 671

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R    +  + S++I+ L K    DL  + L ++   + +    ++  +I G  KVG  E
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A     KM+E  C P+V  Y A+++   +       L +Y +M    C PN +T+ +LI
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA-DEAYRLFLKMKDSGC 234
           N    +G  + A ++LDEM Q     +  +Y  +I G    NR    +  L  ++ ++  
Sbjct: 792 NHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF---NREFITSIGLLDELSENES 848

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS-----YSCLIDGLFRAKRY 289
            P    Y  L++ F K  R++ AL LL         P L       Y+ LI+ L  A + 
Sbjct: 849 VPVESLYRILIDNFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKV 905

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           D+A+  Y  M  + + P++  +  +I+GL+  GK ++A++L
Sbjct: 906 DKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 238/470 (50%), Gaps = 19/470 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           F V+   Y K    EKA++ F +M  EF C+  V  +N+VLN+  ++ LF  AL  Y  +
Sbjct: 99  FIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHV 158

Query: 160 V---KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           V    LN  PN +TF+L+I  + + G  + AI++  E+  R   P+ +TY+ ++ GLC+ 
Sbjct: 159 VASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKE 218

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R DEA  L  +M+  G  P+ VA+N L++  CK   +  A  L+ +    G VP   +Y
Sbjct: 219 ERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTY 278

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + L+ GL    + ++A +   +M   K  P+ V +G +I G    G+  D  ++L  +  
Sbjct: 279 NALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEA 338

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG   + Y Y++LI G C  G  +QA  L  E+  +   PNT  ++ LI G+CR G +D+
Sbjct: 339 RGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDE 398

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A+   ++M+  G  P+   +++L+ G  +AG+  KA L++ +M                N
Sbjct: 399 ARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEM-------------ANNN 445

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            +H++     ++   C  G   +A  +  Q+   G   D++ Y+S+I+GFC    +   L
Sbjct: 446 CIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGL 505

Query: 517 KLFKELQLKG--LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           KLF ++  +G  ++PD +TY  L+N          A  I   M   GC P
Sbjct: 506 KLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDP 555



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 231/445 (51%), Gaps = 17/445 (3%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDL---YWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           ++ ++SF S   V++++++   F+    ++  +   +S N+   +  F ++I    ++G 
Sbjct: 129 KQTVKSFNS---VLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGL 185

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            +KA+E F ++   +C PD Y Y+ +++   +++    A+++  EM      PN+V F++
Sbjct: 186 VDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNV 245

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI+ L K G    A K++D M  +G +PN+ TY  ++ GLC   + ++A  L  +M  + 
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C P+ V +  L+NGF    R  +   +L S E  G       YS LI GL +  ++++A 
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +++M  +   P+ ++Y  +I GL   GK+ +A   LS+M+ +G +P+++ Y++L++G+
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGY 425

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
            + G   +A  +  E+   + + N   ++ILI G+C++G   +A  ++ +M   G    V
Sbjct: 426 FEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDV 485

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             ++++I G C A  +E+   LF +M           L QG     D  +   ++  +C 
Sbjct: 486 VAYSSMIHGFCNANLVEQGLKLFNQM-----------LCQGPVVQPDVITYNILLNAFCI 534

Query: 474 AGLIHKAYKILMQLAESGNLPDIIT 498
              I +A  IL  + + G  PD IT
Sbjct: 535 QKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 195/410 (47%), Gaps = 28/410 (6%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N     IV  GL   NRA E Y   +  K     P+ + +N ++   C+L  VD+A+ + 
Sbjct: 136 NSVLNVIVQEGL--FNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           R        P   +YS L+ GL + +R DEA +   +M  E   P++V + V+I  L + 
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G +  A KL+ +M  +G VP+   YNAL+ G C  G L++A SL  ++     +PN  TF
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-- 439
             LI G    G   D  ++   +E  G   +  ++++LI GLCK G+  +A  L+ +M  
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 440 -EIGKNPTLFLRLSQGGNR-------------------VHDKASLQTMVEQYCTAGLIHK 479
              G N  ++  L  G  R                   + +  +  +++  Y  AG  HK
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  +  ++A +  + + + Y+ LING CK G    AL ++K++  +G++ D V Y ++I+
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIH 493

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           G    +  E   ++F QM   G    P V   ++T++     F +  S++
Sbjct: 494 GFCNANLVEQGLKLFNQMLCQG----PVVQPDVITYNILLNAFCIQKSIF 539



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 54/405 (13%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSL---PNTHTFTILICGMCRNGMVDDAQKLFN 402
           +N+++      GL ++A      +    SL   PN  TF ++I  MCR G+VD A ++F 
Sbjct: 135 FNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFR 194

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           ++    C P    ++ L+ GLCK   +++A  L  +M++ G  P L              
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNL-------------- 240

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++   C  G + +A K++  +   G +P+ +TYN+L++G C  G +  A+ L  +
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +      P+ VT+GTLING     R  D  R+   +   G   +  VY SL++  C+  K
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360

Query: 582 FSLAFSLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGEVENAI--QG 622
           F+ A  LW + +                     G+ DE+   + E   KG + N+     
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSS 420

Query: 623 LLEMDFKLNDFQLAP-----------------YTIWLIGLCQDGQVKEALNIFSVLVECK 665
           L+   F+  D   A                  Y+I + GLC+DG+  EAL ++  ++   
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +   +   +IHG C    ++  + +F   L  G +++P V  Y
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/421 (32%), Positives = 218/421 (51%), Gaps = 16/421 (3%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TFS+LINGL K+G    A  +  E T  G   +  TYT ++  L +  +  EA  L  K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
             +GC+P    YNALLNG CK+ R++EA+ LLR    +G  P + +Y+ LIDGL + KR 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EAY  +++M    +  D V Y  +IRGL +AGK+  A  +   M  +G VPD    + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G C  G +  A  +   +  R   PN   ++ LI G+C+   +D A ++  +M+KA C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P    +N LIDGLCK+G++  A   F +M E G  P ++              +   ++
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVY--------------TYNILI 286

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             +C AG    A  +   ++ S   P+++TY +LI+G CK   +  A   ++ ++ +G  
Sbjct: 287 SGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCP 346

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PDS  Y +L++GL +  + E    +F +M ++G   S    + L+   C+  +   A SL
Sbjct: 347 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRVDEAVSL 405

Query: 589 W 589
           +
Sbjct: 406 F 406



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 231/475 (48%), Gaps = 50/475 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LI+G  K G   +A     +     C  D++ Y  +++   + +    A+A+  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P I T++ L+NGL K G+ E AI +L ++   G  P+  TYT +I GL +  R+
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EAY+LF +M   G + D V Y AL+ G  +  ++ +A ++ ++    G VP + + S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +A R   A   ++ M    + P+ V+Y  +I GL +A K+  A+++L+ M++   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PDT  YN LI G C  G +  AR+   E+ +    P+ +T+ ILI G C+ G  D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F+ M  + C P+V  +  LI GLCK  +L KA+L +  M+                   
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMK------------------- 341

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                        E G  PD   Y+SL++G CK G + G   LF
Sbjct: 342 -----------------------------ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLF 372

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            E++  G+  +S T   LI  L + +R ++A  +F  + + G  P P  Y S+++
Sbjct: 373 DEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIIS 425



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 222/454 (48%), Gaps = 14/454 (3%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T++I+I+GL +     +A+ L  +   +GC+ D   Y  +++   K +++ EA+AL+   
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
             +G  P + +Y+ L++GL +  R +EA    RK+ +    PDVV Y  +I GL +  + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A KL  +M  RG+  DT CY ALI+G    G + QA S+   +  +  +P+  T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I G+C+ G +  A ++F  ME  G  P+  +++ALI GLCKA +++ A  +  +M+    
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK---- 236

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
              F           D  +   +++  C +G +  A     ++ E+G  PD+ TYN LI+
Sbjct: 237 -KAFC--------TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILIS 287

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GFCK GN + A  +F ++      P+ VTYGTLI+GL +  +   A   +  M + GC P
Sbjct: 288 GFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPP 347

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
              VY SL+   C+  K      L+ +  R          + I    +   V+ A+  L 
Sbjct: 348 DSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVS-LF 406

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
               K        Y   +  L + G+V E   ++
Sbjct: 407 NAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVY 440



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 193/389 (49%), Gaps = 37/389 (9%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++++ +   +     +  L++G  K+G  E+A++   K+ +  C PDV  Y ++++   +
Sbjct: 57  MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 116

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K+    A  ++ EM       + V ++ LI GL ++GK   A  +   MT +G +P+  T
Sbjct: 117 KKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 176

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            + +I GLC+  R   A R+F  M+  G +P+ V Y+AL++G CK R++D AL +L   +
Sbjct: 177 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K    P   +Y+ LIDGL ++     A A++ +M E   +PDV  Y ++I G  +AG   
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 296

Query: 326 DAMKLLSD-----------------------------------MRERGIVPDTYCYNALI 350
            A  +  D                                   M+ERG  PD++ Y++L+
Sbjct: 297 AACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G C  G L+    L  E+ +R  + N+ T T LI  +C+   VD+A  LFN + K G  
Sbjct: 357 DGLCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-M 414

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM 439
           P    +N++I  L K+G++ +   ++ +M
Sbjct: 415 PHPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 151/351 (43%), Gaps = 53/351 (15%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           ++ LI G    G+L QA SL  E        + HT+T ++  + +N  + +A  L  K+ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
             GC P++  +NAL++GLCK G LE+A +LL   ++ G  P              D  + 
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP--------------DVVTY 107

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            ++++         +AYK+  ++A  G   D + Y +LI G  + G I  A  ++K +  
Sbjct: 108 TSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTS 167

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G  PD VT  T+I+GL +  R   A RIF  M   G  P+  VY +L+   C+ RK   
Sbjct: 168 QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 227

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           A  +  Q  +     D  +                                  Y I + G
Sbjct: 228 ALEMLAQMKKAFCTPDTIT----------------------------------YNILIDG 253

Query: 645 LCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           LC+ G V  A   F  ++E  CK  V   +   LI G CK G  D A  VF
Sbjct: 254 LCKSGDVAAARAFFDEMLEAGCKPDVYTYNI--LISGFCKAGNTDAACGVF 302



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           K  ++G    I+  K    R  A N    SA+I  L K    D   + L +++    +  
Sbjct: 186 KAGRIGAAVRIF--KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  + +LI G  K GD   A   F +M E  C+PDVY YN +++   +      A  V+ 
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M    C PN+VT+  LI+GL K  +   A      M +RG  P+ F Y+ ++ GLC+  
Sbjct: 304 DMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSG 363

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + +    LF +M+ SG + +      L+   CK  RVDEA++L  +  K+G +P   +Y+
Sbjct: 364 KLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYN 421

Query: 278 CLIDGLFRAKRYDEAYAWYRKM 299
            +I  L ++ + +E  A Y++M
Sbjct: 422 SIISALIKSGKVNEGQAVYQEM 443



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 136/315 (43%), Gaps = 53/315 (16%)

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           F+ LI+GL KAG L +A+            +L    +  G  + D  +  T+V+      
Sbjct: 2   FSILINGLVKAGMLIQAH------------SLAQETTTNGCTI-DIHTYTTIVDWLAKNK 48

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I +A  ++ ++  +G  P I TYN+L+NG CK+G +  A+ L +++   G  PD VTY 
Sbjct: 49  KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 108

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +LI+GL +  R  +A+++F +M   G       Y +L                       
Sbjct: 109 SLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTAL----------------------- 145

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                      I   LQ G++  A      M  +     +   +  + GLC+ G++  A+
Sbjct: 146 -----------IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAV 194

Query: 656 NIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC-NYLL 712
            IF  + E + +  P   V   LIHGLCK   +D A+++ L  +K  F     +  N L+
Sbjct: 195 RIFKSM-EARGLA-PNEVVYSALIHGLCKARKMDCALEM-LAQMKKAFCTPDTITYNILI 251

Query: 713 RSLLFSKDNKKVHAY 727
             L  S D     A+
Sbjct: 252 DGLCKSGDVAAARAF 266


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 247/476 (51%), Gaps = 15/476 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+ Y +      A + F + + F C P V+ +  +++I      F  A  VY ++V+  
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  +   +++LI    +SG+ + A++M  EM  +G  P+++TY  +++ L +  R  EA 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F  M + G +P+   YN L++ F K+ ++D AL L    ++ GF P + +Y+ L+D L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             A R   A   + KM  +   PD   Y  ++ GL ++G+V++A K+  +M +RG+  D 
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN+L+      G +D+   L  E+ ++   P+  +F  ++  + +    D A+++F +
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M ++GC P +  +N LID   + G+  +A  +  +M E G  P              +  
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIP--------------ETK 381

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  +++    T G + +A+ +L ++  +G  PD++TYN L++   K G    A +LF+++
Sbjct: 382 TYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQM 441

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + KG+ PD+++Y   I+GL   DR ++A  +F  M   GC    A+Y+ L+  + R
Sbjct: 442 KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 202/449 (44%), Gaps = 48/449 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI  + + G  + A+E F +MK    +PD Y Y  ++N   +      A + +  M
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    PNI T++LL++   K G+ ++A+ +  EM +RG  P+  TY I++  LC   R 
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A +LF KM   GCSPD   Y+ L+NG  K  RV+EA  + R     G    L +Y+ L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +  L +A   D  +   ++M  +   PD   +  ++  L +A K   A ++ + M E G 
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI  +   G   QAR +  E+ +   +P T T+  LI  +  +G VD+A  
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +  +ME AGC P V  +N L+D L K GE ++A  LF +M+                   
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMK------------------- 442

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                        + G  PD ++Y   I+G      ++ AL LF
Sbjct: 443 -----------------------------DKGVEPDTLSYAVRIDGLAFDDRLDEALVLF 473

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREE 548
           K+++  G   D   Y  LI    R    E
Sbjct: 474 KDMKAVGCPVDKAMYRILIRAAHRAGDTE 502



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 228/505 (45%), Gaps = 55/505 (10%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+  + +  +  +A  L    E     P + +++ LID L  +  ++ A   Y+K+ ++ 
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            + D   Y V+IR    +G++  AM++  +M+ +G  PD Y Y  L+      G + +AR
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           S    + +R   PN  T+ +L+    + G +D A  LF +M++ G  PSV  +N L+D L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           C AG +  A  LF+KM              G     D  +  T+V     +G + +A+K+
Sbjct: 216 CSAGRVGAARKLFHKM-------------TGDGCSPDSYTYSTLVNGLGKSGRVEEAHKV 262

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++ + G   D++ YNSL+    K GN++   KL KE+  KG  PD+ ++ T+++ L +
Sbjct: 263 FREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
            ++ + A  +F +M ++GC P    Y  L+    R                   G   ++
Sbjct: 323 ANKPDAAREVFARMVESGCKPDLISYNILIDSYAR------------------FGDAAQA 364

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            + +EE ++ G +                 +   Y   +  L  DGQV EA   F+VL E
Sbjct: 365 RQMLEEMVEAGFIP----------------ETKTYNSLIHWLATDGQVDEA---FAVLEE 405

Query: 664 CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
            +     P  V   +L+  L KRG    A  +F      G  + P   +Y +R    + D
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG--VEPDTLSYAVRIDGLAFD 463

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLY 745
           ++   A  L   MK+VG  +D  +Y
Sbjct: 464 DRLDEALVLFKDMKAVGCPVDKAMY 488



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 7/196 (3%)

Query: 518 LFKELQLKG--LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L KE+  +G  LRP+++    LI    R ++  DAF +F Q     C+P+   +  L+  
Sbjct: 17  LLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                +F  A  ++ + ++     D  +    I  F + G++++A++   EM  K ++  
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD 134

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y   +  L + G+V+EA + F  ++E       P+   L+    K G LD+A+ +F 
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFA 194

Query: 695 YTLKNGFILRPRVCNY 710
              + GF  +P V  Y
Sbjct: 195 EMKRRGF--QPSVVTY 208



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 35/162 (21%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L+E+        +  +  LI      G  ++A     +M+   C+PDV  YN ++++ 
Sbjct: 366 QMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDM- 424

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                                             L K G+ + A ++  +M  +G+ P+ 
Sbjct: 425 ----------------------------------LGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            +Y + I GL   +R DEA  LF  MK  GC  D   Y  L+
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 268/570 (47%), Gaps = 21/570 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I+GY + G   +   +          P+ Y Y  ++     + L   AL V  EM 
Sbjct: 79  YNAMIAGYCRAG---QVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMP 135

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C        +++    + G    A++ L  +  +G   +     +V+S +C+    D
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E   L  K+   GC PD V+YNA+L G C  +R D+   L+    + G  P + +++ LI
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLI 255

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R   +++ +    +M E    PD+ +Y  +I G+ + G  + A  +LS M   G+ 
Sbjct: 256 AYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 315

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+  CYN ++KG C     ++A  L  E+++ D   +  TF IL+   C+NG+VD   +L
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 375

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVH 459
             +M + GC P V  +  +I+G CK G +++A +L   M   G  P              
Sbjct: 376 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI----------- 424

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              S   +++  C A     A +++  + + G LP+ +T+N+LIN  CK G +  A++L 
Sbjct: 425 ---SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           K++ + G  PD ++Y T+I+GL +  + E+A  +   M   G TP+  +Y S+ +   R 
Sbjct: 482 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            +      ++   ++D + R D ++ +  I    ++ E + AI     M         + 
Sbjct: 542 GRTDKIIQMF-DSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           YTI + GL  +G V+EA ++ S L   +A+
Sbjct: 601 YTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 252/549 (45%), Gaps = 17/549 (3%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +V ++ +I G  ++G+   A ++   +    + PN +TY  ++  LC      +A  +  
Sbjct: 76  VVAYNAMIAGYCRAGQVAAARRLAAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLD 132

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   GC+      + +L   C+      A+  L+     G     G+ + ++  +    
Sbjct: 133 EMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQG 192

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             DE     RK+     EPD+V Y  +++GL  A +  D  +L+ +M   G  P+   +N
Sbjct: 193 CVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI   C  GL +Q      ++ +    P+   +  +I G+C++G  + A  + ++M   
Sbjct: 253 TLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSY 312

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P+V  +N ++ GLC A   E+A  L  +M     P              D  +   +
Sbjct: 313 GLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL-------------DDVTFNIL 359

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V+ +C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G ++ A+ L K +   G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P++++Y  ++ GL R +R  DA  +   M Q GC P+P  + +L+ + C++     A  
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+     L 
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           ++G+  + + +F  + +            +I  LCKR   D A+D F Y + NG +    
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 707 VCNYLLRSL 715
               L+R L
Sbjct: 600 TYTILIRGL 608



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 232/519 (44%), Gaps = 54/519 (10%)

Query: 60  LRSFASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           LR  A+   +  ++L+      GF    + L  L +   ++ S    +++S   + G  +
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           + +E   K+  F C+PD+  YNAVL      + +     +  EMV++ C PN+ TF+ LI
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLI 255

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
             L ++G  E   + L +M + G  P+   Y  +I G+C+    + A  +  +M   G  
Sbjct: 256 AYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 315

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           P+ V YN +L G C   R +EA  LL   F++D  +  + +++ L+D   +    D    
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV-TFNILVDFFCQNGLVDRVIE 374

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M E    PDV+ Y  +I G  + G V +A+ LL +M   G  P+T  Y  ++KG C
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
                  A+ L   + ++  LPN  TF  LI  MC+ G+V+ A +L  +M   GC P + 
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLI 494

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++ +IDGL KAG+ E+                                           
Sbjct: 495 SYSTVIDGLGKAGKTEE------------------------------------------- 511

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                A ++L  +   G  P+ I Y+S+ +   + G  +  +++F  +Q   +R D+  Y
Sbjct: 512 -----ALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +I+ L +    + A   F  M  NGC P+ + Y  L+
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 178/378 (47%), Gaps = 35/378 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + A+ + +I+ L +   F+   + L ++     +    ++  +I G  K G  E A +  
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 306

Query: 122 GKMKEFDCQPDVYIYNAVL---------------------------NIAF--------RK 146
            +M  +  +P+V  YN VL                           ++ F        + 
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 366

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
            L    + +  +M++  C+P+++T++ +ING  K G  + A+ +L  M+  G  PN  +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           TIV+ GLC+  R  +A  L   M   GC P+ V +N L+N  CK   V++A+ LL+    
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV 486

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           +G  P L SYS +IDGL +A + +EA      M  + I P+ ++Y  M   LS  G+   
Sbjct: 487 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 546

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
            +++   +++  +  D   YNA+I   C     D+A      +     +PN  T+TILI 
Sbjct: 547 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR 606

Query: 387 GMCRNGMVDDAQKLFNKM 404
           G+   G+V +AQ L +++
Sbjct: 607 GLASEGLVREAQDLLSEL 624



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 228/526 (43%), Gaps = 26/526 (4%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           +AL+   C   R  +A    R+ +  G    + +Y+ +I G  RA +   A      +  
Sbjct: 48  SALIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV-- 102

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + P+   Y  ++R L   G + DA+ +L +M  RG        + +++  C  G    
Sbjct: 103 -PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 362 A-RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           A R+LQV   K  +L ++    +++  +C  G VD+  +L  K+   GC P +  +NA++
Sbjct: 162 AVRALQVLHAKGCTL-DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            GLC A   +    L  +M  +G  P +              A+  T++   C  GL  +
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNV--------------ATFNTLIAYLCRNGLFEQ 266

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            ++ L Q+ E G  PD+  Y ++I+G CK G+   A  +   +   GL+P+ V Y T++ 
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL   +R E+A  +  +M Q  C      +  L+ + C+         L  Q L      
Sbjct: 327 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 386

Query: 600 DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           D  +  + I  F ++G V+ A+  L  M           YTI L GLC+  +  +A  + 
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           S +++   +  P +   LI+ +CK+G ++ A+++    L NG    P + +Y        
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG--CSPDLISYSTVIDGLG 504

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENM 764
           K  K   A  LL  M + G   +  +Y    S L     T ++  M
Sbjct: 505 KAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 550



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  ++  + ++  + S   + G  +K ++ F  +
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 554

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 555 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 614

Query: 185 EVAIKMLDEMTQR 197
             A  +L E+  R
Sbjct: 615 REAQDLLSELCSR 627


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 262/535 (48%), Gaps = 24/535 (4%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            +I  L + N  D     L +++  NV    ++F  +I  Y +    E+ L+ F +++EF
Sbjct: 79  TMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREF 138

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
            C+P V IYN VL+    + LF +  A+Y  M      PN+ T+++L+  L ++GK + A
Sbjct: 139 GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGA 198

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+L EM+ +G  P+  +YT VIS +C++   D+A  L +K +     P    YNAL++G
Sbjct: 199 CKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHG 253

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK  R  EA  L+      G  P + SYS +I  L      + + A + +MF     P+
Sbjct: 254 VCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPN 313

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V  +  +I+G    G+V DA+ L + M   G+ P+   YN LI G C  G +D+A S+  
Sbjct: 314 VQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWN 373

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ K    PN  T++ +I G  ++G +  A + +NKM   GC P+V ++  ++D LC+  
Sbjct: 374 QMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMS 433

Query: 428 ELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             ++A +L+   +  G  PT+               +    ++  C AG +  A  +L Q
Sbjct: 434 MFDQAFDLIDNMISDGCPPTVI--------------TFNNFIKGLCRAGRVEWAMNVLDQ 479

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + +   LP+I TYN L++G  +      A  L +EL+ + +  D VTY T++ G      
Sbjct: 480 MEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGM 539

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +   ++ G+M  NG         + +   C+  K   A    ++ L +IS   +
Sbjct: 540 HQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTA----IKVLDNISAEKE 590



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 207/442 (46%), Gaps = 19/442 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +IS   K+GD +KA E   K      +P V +YNA+++   ++  F  A  +  EMV
Sbjct: 217 YTTVISSMCKLGDVDKARELAMKF-----EPVVPVYNALIHGVCKECRFKEAFDLMNEMV 271

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                PN++++S +I+ LS  G  E+++ +   M  RG  PN  T+T +I G     R  
Sbjct: 272 DRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVG 331

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L+  M   G SP+ VAYN L++G C    +DEA+++    EKD   P + +YS +I
Sbjct: 332 DAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTII 391

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  ++     A   + KM      P+VV+Y  M+  L +      A  L+ +M   G  
Sbjct: 392 YGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCP 451

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    +N  IKG C  G ++ A ++  ++ K + LPN  T+  L+ G+ R     +A  L
Sbjct: 452 PTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGL 511

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             ++E+         +N ++ G    G  ++   L  KM +       ++L        D
Sbjct: 512 IRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG-----IKL--------D 558

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQL-AESGNLPDIITYNSLINGFCKVGNINGALKLF 519
             ++ T V  YC  G +  A K+L  + AE     DIIT+  ++ G C       A+   
Sbjct: 559 TITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYL 618

Query: 520 KELQLKGLRPDSVTYGTLINGL 541
            E+  +G+ P+  T+  L+ G 
Sbjct: 619 HEMLKRGIFPNIATWNVLVRGF 640



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 40/382 (10%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDL  + +D  R  + +V+S  +  +IS    +G+ E +L  FG+M    C+P+V  + 
Sbjct: 263 AFDLMNEMVD--RGVDPNVIS--YSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFT 318

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           +++   F +     A+ ++  M++    PN+V ++ LI+GL   G  + AI + ++M + 
Sbjct: 319 SLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD 378

Query: 198 GILPNKFTYTIVISG-----------------------------------LCQINRADEA 222
            I PN  TY+ +I G                                   LCQ++  D+A
Sbjct: 379 SIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQA 438

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + L   M   GC P  + +N  + G C+  RV+ A+ +L   EK   +P + +Y+ L+DG
Sbjct: 439 FDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDG 498

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           LFRA  + EA    R++ E K+E D V Y  ++ G S  G  +  ++LL  M   GI  D
Sbjct: 499 LFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLD 558

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           T   N  +  +C LG +  A  +   I  +++   +  T TI++ G+C     ++A    
Sbjct: 559 TITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYL 618

Query: 402 NKMEKAGCFPSVGMFNALIDGL 423
           ++M K G FP++  +N L+ G 
Sbjct: 619 HEMLKRGIFPNIATWNVLVRGF 640



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/557 (22%), Positives = 242/557 (43%), Gaps = 86/557 (15%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T+  +I+ L ++ + +    +L +M    +  ++  +  VI    + N  ++  ++F +
Sbjct: 75  LTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYR 134

Query: 229 MKDSGC-----------------------------------SPDFVAYNALLNGFCKLRR 253
           +++ GC                                    P+   YN LL   C+  +
Sbjct: 135 IREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGK 194

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           VD A  LL      G  P   SY+ +I  + +    D+A     +    K EP V +Y  
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVPVYNA 249

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G+ +  + K+A  L+++M +RG+ P+   Y+ +I    D+G ++ + ++   ++ R 
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG 309

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  TFT LI G    G V DA  L+N M + G  P+V  +N LI GLC  G +++A 
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAI 369

Query: 434 LLFYKME---IGKNPTLFLRLSQGGNRVHDKAS-------------------LQTMVEQY 471
            ++ +ME   I  N T +  +  G  +  D  S                      MV+  
Sbjct: 370 SVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVL 429

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C   +  +A+ ++  +   G  P +IT+N+ I G C+ G +  A+ +  +++     P+ 
Sbjct: 430 CQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI 489

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            TY  L++GL R +   +A  +  ++ +         Y ++M        +  +F+   Q
Sbjct: 490 RTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIM--------YGFSFNGMHQ 541

Query: 592 YLRDISGR--------DDESMK-SIEEFLQKGEVENAIQGL----LEMDFKLNDFQLAPY 638
            +  + G+        D  ++  ++  + + G+V+ AI+ L     E +F+ +   +  +
Sbjct: 542 QVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRAD---IITH 598

Query: 639 TIWLIGLCQDGQVKEAL 655
           TI L G+C     +EA+
Sbjct: 599 TIILWGICNWLGTEEAV 615



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 195/447 (43%), Gaps = 27/447 (6%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y  +ID L R    D      ++M  E +     L+  +I+    +   +  +K+   +
Sbjct: 76  TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           RE G  P    YN ++       L     +L   +      PN  T+ +L+  +C+NG V
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           D A KL  +M   GC P    +  +I  +CK G+++KA  L  K E    P +       
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFE----PVV------- 244

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                       ++   C      +A+ ++ ++ + G  P++I+Y+++I+    +GN+  
Sbjct: 245 -------PVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVEL 297

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +L +F  + ++G RP+  T+ +LI G     R  DA  ++  M + G +P+   Y +L+ 
Sbjct: 298 SLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIH 357

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
             C       A S+W Q  +D S R + +  S  I  F + G++ +A +   +M      
Sbjct: 358 GLCSDGNMDEAISVWNQMEKD-SIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCR 416

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLA 689
             +  YT  +  LCQ     +A ++   ++   +   PP+ +     I GLC+ G ++ A
Sbjct: 417 PNVVVYTCMVDVLCQMSMFDQAFDLIDNMI---SDGCPPTVITFNNFIKGLCRAGRVEWA 473

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLL 716
           M+V     K   +   R  N LL  L 
Sbjct: 474 MNVLDQMEKYECLPNIRTYNELLDGLF 500



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 1/219 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++ +L + + FD  +  +D + S         F   I G  + G  E A+    +M++
Sbjct: 423 TCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           ++C P++  YN +L+  FR   F  A  +  E+ +     + VT++ ++ G S +G  + 
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQ 542

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALL 245
            +++L +M   GI  +  T    ++  C++ +   A ++   +  +     D + +  +L
Sbjct: 543 VLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIIL 602

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            G C     +EA+  L    K G  P + +++ L+ G F
Sbjct: 603 WGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 247/492 (50%), Gaps = 19/492 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYN 137
           F    + LD ++     +    F V+   Y K    EKA++ F +M  EF+C+     +N
Sbjct: 106 FKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFN 165

Query: 138 AVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           +VLN+  ++ LF  AL  Y  ++    ++  PN++TF+L+I  + K G  + AI++  +M
Sbjct: 166 SVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDM 225

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           T R   P+ +TY  ++ GLC+ +R DEA  L  +M+  GC P  V +N L+NG CK   +
Sbjct: 226 TIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDL 285

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
             A  L+ +    G +P   +Y+ LI GL    + ++A +   +M   K  P+VV YG +
Sbjct: 286 SRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTI 345

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL + G+  D   +L+ M ERG   + Y Y+ LI G    G   +A  L  E+  +  
Sbjct: 346 INGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGY 405

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             NT  ++ +I G+CR+G  DDA ++ ++M   GC P+    ++L+ G  +AG   +A  
Sbjct: 406 ELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRA-- 463

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
               +E+ K+           N   ++     ++   C  G + +A  +  Q+   G  P
Sbjct: 464 ----VEVWKD-------MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKP 512

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKG--LRPDSVTYGTLINGLQRVDREEDAFR 552
           D++ Y+S+ING    G +  A++L+ E+  +G   +PD VTY  L+N L +      A  
Sbjct: 513 DVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAID 572

Query: 553 IFGQMPQNGCTP 564
           +   M   GC P
Sbjct: 573 LLNSMLDRGCDP 584



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 231/441 (52%), Gaps = 14/441 (3%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDV--FFVLISGYYKVGDCEKA 117
           R+  S ++V++++++   F    +  +  + +  VS+  +V  F ++I    KVG  + A
Sbjct: 159 RTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDA 218

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           ++ F  M    C+PDVY Y  +++   +      A+++  EM    C P+ VTF++LING
Sbjct: 219 IQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLING 278

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L K G    A K++D M  +G +PN+ TY  +I GLC   + ++A  L  +M  S C P+
Sbjct: 279 LCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPN 338

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            V Y  ++NG  K  R  +   +L   E+ G+      YS LI GLF+  +  EA   ++
Sbjct: 339 VVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFK 398

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M  +  E + ++Y  +I GL   GK  DA+++LS+M  +G  P+ Y  ++L+KGF + G
Sbjct: 399 EMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAG 458

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
              +A  +  ++ K +   N   +++LI G+C++G V +A  ++ +M   GC P V  ++
Sbjct: 459 NSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYS 518

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ++I+GL  AG +E A  L+ +M           L QG +   D  +   ++   C    I
Sbjct: 519 SMINGLSIAGLVEDAMQLYNEM-----------LCQGPDSQPDVVTYNILLNTLCKQSSI 567

Query: 478 HKAYKILMQLAESGNLPDIIT 498
            +A  +L  + + G  PD++T
Sbjct: 568 SRAIDLLNSMLDRGCDPDLVT 588



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 199/409 (48%), Gaps = 24/409 (5%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C +GL+D A  +  ++  R   P+ +T+  L+ G+C+   +D+A 
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  GCFPS   FN LI+GLCK G+L +A  L   M        FL+       +
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNM--------FLK-----GCI 301

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +  T++   C  G + KA  +L ++  S  +P+++TY ++ING  K G       +
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV 361

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              ++ +G   +   Y TLI+GL +  + ++A  +F +M   G   +  VY +++   CR
Sbjct: 362 LALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCR 421

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEM---DFKLNDFQ 634
             K   A  +  +        +  +  S+ + F + G    A++   +M   +F  N+  
Sbjct: 422 DGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNE-- 479

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
              Y++ + GLC+DG+VKEA+ +++ ++   CK  V   S   +I+GL   G ++ AM +
Sbjct: 480 -VCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYS--SMINGLSIAGLVEDAMQL 536

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           +   L  G   +P V  Y +      K +    A  LL  M   G D D
Sbjct: 537 YNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPD 585



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 39/286 (13%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNL---PDIITYNSLINGFCKVGNINGALKLF 519
           S  +++      GL H+A +    +  +  +   P+++T+N +I   CKVG ++ A+++F
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +++ ++   PD  TY TL++GL + DR ++A  +  +M  +GC PSP  +  L+   C++
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
              S A  L                  ++    KG + N +                 Y 
Sbjct: 283 GDLSRAAKL------------------VDNMFLKGCIPNEVT----------------YN 308

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + GLC  G++++A+++   +V  K +    +   +I+GL K+G       V     + 
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           G+ +   V + L+  L   K+ K   A HL   M   GY+L+  +Y
Sbjct: 369 GYCVNEYVYSTLISGLF--KEGKSQEAMHLFKEMTVKGYELNTIVY 412


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/653 (24%), Positives = 300/653 (45%), Gaps = 52/653 (7%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           F +   K + LR   S     S+L      D+ W   ++++       +    +++ G  
Sbjct: 104 FVLVKMKEQNLR--PSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLC 161

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
                  A+    +    +  P V  +N +++   +  L  +A + +  M+K   LP+  
Sbjct: 162 GQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTY 221

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           ++++LI+GL  +G  E A+++ ++M ++G+ P+  TY IV  G   +     A  +  KM
Sbjct: 222 SYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKM 281

Query: 230 -KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
             D G  PD V Y  L+ G C++  ++EAL L R     GF   +  YS L+  L +  +
Sbjct: 282 LTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ 341

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            DEA     +M    ++PD+V Y ++I GL + GKV+ A++L  +M    I P+++ ++ 
Sbjct: 342 VDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSG 401

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++KG C+ G+L  AR     +   +  P+   + I+I G  + G V++A +L+ ++    
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTM 467
             PS+  FN+LI G CK  ++ +A  L   +++ G  P+                +  T+
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS--------------AVTYTTL 507

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  YC  G I+K +++L+++      P ++TY  +I G CK   +  +++L ++++ KGL
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD +TY T+I    +      AF +   M  +   P+PA Y  L+   CR         
Sbjct: 568 APDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRY-------- 619

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                                     G+VE+A + L+ +  +  +     YT  +   C 
Sbjct: 620 --------------------------GDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCV 653

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            G  + A+ +F  +VE    V+      +I+ LCKR  ++ A   F   L +G
Sbjct: 654 KGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDG 706



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 219/461 (47%), Gaps = 13/461 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLI G+ ++G+ E+AL     +     Q +V +Y+ +L+   ++     AL + YEM 
Sbjct: 294 YTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEME 353

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             N  P++VT+S+LI+GL K GK + AI++  EM    I PN F ++ ++ GLC+     
Sbjct: 354 ANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLS 413

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A   F  +  S   PD   YN +++G+ KL  V+EA+ L +        P + +++ LI
Sbjct: 414 DARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLI 473

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  + ++  EA      +    +EP  V Y  ++    E G +    +LL +M  + I 
Sbjct: 474 YGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE 533

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y  +IKG C    L+++  L  ++  +   P+  T+  +I   C+   +  A +L
Sbjct: 534 PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFEL 593

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            + M      P+   +N LIDGLC+ G++E A+ +   ++  +N  L             
Sbjct: 594 LDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ-DRNINL------------T 640

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           K +  TM++ +C  G   +A K+  Q+ E G    I  Y+++IN  CK   IN A   F 
Sbjct: 641 KVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFC 700

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            +   G+ PD   +  ++N   R       F +   M + G
Sbjct: 701 IMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/579 (26%), Positives = 273/579 (47%), Gaps = 37/579 (6%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL V  +M + N  P+I T++ L+  L     T++   + +++   G   +  T +I++ 
Sbjct: 102 ALFVLVKMKEQNLRPSIQTYNSLLYNLRH---TDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 212 GLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           GLC  +R  +A  LFL+  D    +P  V++N +++ +CKL   D A +      K G +
Sbjct: 159 GLCGQSRFRDAV-LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   SY+ LI GL  A   +EA      M ++ ++PD+V Y ++ +G    G +  A ++
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 331 LSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  M  + G+ PD   Y  LI G C +G +++A  L+ ++       N   +++L+  +C
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLF 448
           + G VD+A +L  +ME     P +  ++ LI GLCK G++++A  L+ +M   +  P  F
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 449 LR------LSQGG---------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                   L + G               N   D      M++ Y   G + +A ++  +L
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            +    P I+T+NSLI GFCK   +  A +L + ++L GL P +VTY TL+N        
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDES 603
                +  +M      P+   Y  ++   C++RK   +    +Q L D+  +    D  +
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES----VQLLEDMRAKGLAPDQIT 573

Query: 604 MKSIEE-FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
             +I + F +  ++  A + L +M     +   A Y + + GLC+ G V++A  +   L 
Sbjct: 574 YNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQ 633

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           +    +T  +   +I   C +G    A+ VF   ++ GF
Sbjct: 634 DRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 247/521 (47%), Gaps = 61/521 (11%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALL--------------------------------NGF 248
           +A  + +KMK+    P    YN+LL                                +G 
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGL 160

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C   R  +A+  LR  +   F P + S++ ++    +    D A +++  M +  I PD 
Sbjct: 161 CGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDT 220

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y ++I GL  AG +++A++L +DM ++G+ PD   Y  + KGF  LGL+  AR +  +
Sbjct: 221 YSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQK 280

Query: 369 IWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           +   + L P+  T+T+LICG C+ G +++A +L   +  +G   +V +++ L+  LCK G
Sbjct: 281 MLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRG 340

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++++A  L Y+ME               N   D  +   ++   C  G + +A ++  ++
Sbjct: 341 QVDEALQLLYEME-------------ANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +   P+   ++ ++ G C+ G ++ A   F  L +  LRPD   Y  +I+G  ++   
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
           E+A R++ ++     TPS   + SL+   C+ RK   A  L L+ ++ + G +  ++   
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRL-LESIK-LHGLEPSAVTYT 505

Query: 607 --IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             +  + ++G +    + LLEM+ K  +  +  YT+ + GLC+  +++E++ +   L + 
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQL---LEDM 562

Query: 665 KAIVTPPSCV---KLIHGLCK----RGYLDLAMDVFLYTLK 698
           +A    P  +    +I   CK    R   +L  D+ ++ L+
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 205/483 (42%), Gaps = 68/483 (14%)

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKG----------FCDL----------------- 356
           V DA+ +L  M+E+ + P    YN+L+            + D+                 
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 357 GLLDQARSLQVEIWKRDS-----LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           GL  Q+R     ++ R +      P+  +F  ++   C+ G+ D A+  F  M K G  P
Sbjct: 159 GLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILP 218

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTL-----------FLRLSQGGNRVH 459
               +N LI GL  AG +E+A  L   ME  G  P +            L L  G   + 
Sbjct: 219 DTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREII 278

Query: 460 DK-----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
            K            +   ++  +C  G I +A ++   L  SG   ++I Y+ L++  CK
Sbjct: 279 QKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCK 338

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ AL+L  E++   L+PD VTY  LI+GL +  + + A +++ +M  N   P+   
Sbjct: 339 RGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFA 398

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           +  ++   C +   S A  ++   L   + R D ++ +  I+ +++ G+VE A++    +
Sbjct: 399 HSGILKGLCEKGMLSDA-RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKR 683
             K     +  +   + G C++ +V EA  +   +   K     PS V    L++  C+ 
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESI---KLHGLEPSAVTYTTLMNAYCEE 514

Query: 684 GYLDLAMDVFL-YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           G ++   ++ L   LK+   + P V  Y +      K  K   +  LL  M++ G   D 
Sbjct: 515 GNINKLHELLLEMNLKD---IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQ 571

Query: 743 CLY 745
             Y
Sbjct: 572 ITY 574



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 113/242 (46%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++ Y + G+  K  E   +M   D +P V  Y  V+    +++    ++ +  +M 
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+ +T++ +I    K+     A ++LD+M    + P   TY ++I GLC+    +
Sbjct: 564 AKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVE 623

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+ + ++D   +   VAY  ++   C       A+ +     + GF   +  YS +I
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           + L +    +EA  ++  M  + + PD  ++ +M+     AG V    +LL+ M + G++
Sbjct: 684 NRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743

Query: 341 PD 342
            D
Sbjct: 744 HD 745



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 42/284 (14%)

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
           L  M+++   + ++H A  +L+++ E    P I TYNSL+     + + +    ++ +++
Sbjct: 86  LDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYN---LRHTDIMWDVYNDIK 142

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G    + T   +++GL    R  DA     Q       PS   + ++M+  C+     
Sbjct: 143 DSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLAD 202

Query: 584 LA---FSLWLQY--LRD------------ISGRDDESMKSIEEFLQKG------------ 614
           +A   F + L+Y  L D            ++G  +E+++   +  ++G            
Sbjct: 203 VAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVA 262

Query: 615 ---EVENAIQGLLEMDFK-LNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKA 666
               +   + G  E+  K L D  L P    YT+ + G CQ G ++EAL +   L+    
Sbjct: 263 KGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            +       L+  LCKRG +D A+ +      N   L+P +  Y
Sbjct: 323 QLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN--LQPDLVTY 364


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 165/611 (27%), Positives = 284/611 (46%), Gaps = 77/611 (12%)

Query: 52  IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           +W+ KR RL   ++ S V S     +G +   Q  D L SG+ +   +       G++  
Sbjct: 46  LWSRKRNRLVLVSAASQVES-----SGLNGRAQKFDTLASGHSNSNGN-------GHFSS 93

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
            +    LE        D + + ++   V      +    L   VY+  V     P+I+  
Sbjct: 94  ANSSFVLE--------DVESNNHLRQLVRTGELEEGFKFLENMVYHGNV-----PDIIPC 140

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI G  + GKT  A K+L+ +   G +P+  TY ++ISG C+    + A  +  +M  
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
              SPD V YN +L   C   ++ +A+ +L R  ++D + P + +Y+ LI+   R     
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVG 256

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A     +M +    PDVV Y V++ G+ + G++ +A+K L+DM   G  P+   +N ++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
           +  C  G    A  L  ++ ++   P+  TF ILI  +CR G++  A  +  KM K GC 
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+   +N L+ G CK  ++++A     +M           +S+G     D  +  TM+  
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERM-----------VSRGC--YPDIVTYNTMLTA 423

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G +  A +IL QL+  G  P +ITYN++I+G  K G    A+KL  E++ K L+PD
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           ++TY +L+ GL R  + ++A + F +  + G  P+   + S+M   C+ R+   A   +L
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAID-FL 542

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            Y+ +   +  E+                                  YTI + GL  +G 
Sbjct: 543 VYMINRGCKPTET---------------------------------SYTILIEGLAYEGM 569

Query: 651 VKEALNIFSVL 661
            KEAL + + L
Sbjct: 570 AKEALELLNEL 580



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 202/401 (50%), Gaps = 17/401 (4%)

Query: 94  VSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           +SV  DV  +  ++      G  ++A+E   +M + DC PDV  Y  ++    R      
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ +  EM    C P++VT+++L+NG+ K G+ + AIK L++M   G  PN  T+ I++ 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            +C   R  +A +L   M   G SP  V +N L+N  C+   +  A+ +L    K G  P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY+ L+ G  + K+ D A  +  +M      PD+V Y  M+  L + GKV+DA+++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + +  +G  P    YN +I G    G   +A  L  E+  +D  P+T T++ L+ G+ R 
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
           G VD+A K F++ E+ G  P+   FN+++ GLCK  + ++A + L Y +  G  PT    
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPT---- 553

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
                     + S   ++E     G+  +A ++L +L   G
Sbjct: 554 ----------ETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 227/492 (46%), Gaps = 58/492 (11%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L +    +E ++    M   G  PD +    L+ GFC++ +  +A  +L   E  G VP 
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+ +I G  +A   + A +   +M    + PDVV Y  ++R L ++GK+K AM++L 
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M +R   PD   Y  LI+  C    + QA  L  E+  R   P+  T+ +L+ G+C+ G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEIGKNPTLFLRL 451
            +D+A K  N M  +GC P+V   N ++  +C  G  ++   LL   +  G +P++    
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV--- 345

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +   ++   C  GL+ +A  IL ++ + G  P+ ++YN L++GFCK   
Sbjct: 346 -----------TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A++  + +  +G  PD VTY T++  L +  + EDA  I  Q+   GC+P    Y +
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           +                                  I+   + G+   AI+ L EM  K  
Sbjct: 455 V----------------------------------IDGLAKAGKTGKAIKLLDEMRAKDL 480

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
                 Y+  + GL ++G+V EA+  F    E + +   P+ V    ++ GLCK    D 
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFH---EFERMGVRPNAVTFNSIMLGLCKTRQTDR 537

Query: 689 AMDVFLYTLKNG 700
           A+D  +Y +  G
Sbjct: 538 AIDFLVYMINRG 549



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 173/340 (50%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I    + +G     + LDE+R    +     + VL++G  K G  ++A++    M    
Sbjct: 245 LIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQP+V  +N +L        ++ A  +  +M++    P++VTF++LIN L + G    AI
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L++M + G  PN  +Y  ++ G C+  + D A     +M   GC PD V YN +L   
Sbjct: 365 DILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  +V++A+ +L      G  P L +Y+ +IDGL +A +  +A     +M  + ++PD 
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  ++ GLS  GKV +A+K   +    G+ P+   +N+++ G C     D+A    V 
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +  R   P   ++TILI G+   GM  +A +L N++   G
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 140/255 (54%), Gaps = 3/255 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   + G   +A++   KM +  CQP+   YN +L+   +
Sbjct: 334 DMLRKGFSPSVVT--FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCK 391

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ ++  L K GK E A+++L++++ +G  P   T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL +  +  +A +L  +M+     PD + Y++L+ G  +  +VDEA+     FE
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +++ ++ GL + ++ D A  +   M     +P    Y ++I GL+  G  K
Sbjct: 512 RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAK 571

Query: 326 DAMKLLSDMRERGIV 340
           +A++LL+++  +G++
Sbjct: 572 EALELLNELCNKGLM 586



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 81/173 (46%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +++   K G  E A+E   ++    C P +  YN V++   +      A+ +  EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              +  P+ +T+S L+ GLS+ GK + AIK   E  + G+ PN  T+  ++ GLC+  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           D A    + M + GC P   +Y  L+ G        EAL LL      G + R
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +++ L K    +   + L++L S   S V   +  +I G  K G   KA++   +M+ 
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +PD   Y++++    R+     A+  ++E  ++   PN VTF+ ++ GL K+ +T+ 
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDR 537

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           AI  L  M  RG  P + +YTI+I GL     A EA  L  ++ + G
Sbjct: 538 AIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           D ES   + + ++ GE+E   + L  M +  N   + P T  + G C+ G+ ++A  I  
Sbjct: 102 DVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILE 161

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLF 717
           VL    A+    +   +I G CK G ++ A+ V      +   + P V  Y  +LRSL  
Sbjct: 162 VLEGSGAVPDVITYNVMISGYCKAGEINNALSVL-----DRMSVSPDVVTYNTILRSLCD 216

Query: 718 SKDNKKVHAYHLLCRM 733
           S   K   A  +L RM
Sbjct: 217 S--GKLKQAMEVLDRM 230


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 263/560 (46%), Gaps = 17/560 (3%)

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G   +A  + GKM++     + Y YN ++    +      AL VY  M+     P++ T+
Sbjct: 171 GGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTY 230

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L+  L +   T   + +L+EM   G+ PN +TYTI I  L +  R D+AY +   M+D
Sbjct: 231 SALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMED 290

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC PD V Y  L++  C   ++D+A  L          P L +Y  L+         + 
Sbjct: 291 EGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLET 350

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
              ++ +M  +   PDVV Y +++  L ++GKV  A  +L  MR RGIVP+ + YN LI 
Sbjct: 351 VKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLIS 410

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G  +L  LD+A  L   +      P  +++ + I    + G  + A   F KM+K G  P
Sbjct: 411 GLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMP 470

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           S+   NA +  L + G + +A  +F  +   G +P              D  +   M++ 
Sbjct: 471 SIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSP--------------DSVTYNMMMKC 516

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           Y  AG I KA K+L ++   G  PDII  NSLI+   K G ++ A ++F  L+   L P 
Sbjct: 517 YSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            VTY  LI GL +  +   A  +FG M ++GC P+   + +L+   C+     LA  ++ 
Sbjct: 577 VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFC 636

Query: 591 QYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           +        D  +  + I   +++G    A     +M   L+   +  YT+ L G+ +DG
Sbjct: 637 RMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLYTL-LPGVVKDG 695

Query: 650 QVKEALNIFSVLVECKAIVT 669
           +V++A+ I    V    + T
Sbjct: 696 RVEDAIKIVMEFVHQSGLQT 715



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 191/713 (26%), Positives = 310/713 (43%), Gaps = 77/713 (10%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             + VLI      G  +KA E + KM+    +PD+  Y  +++              + EM
Sbjct: 299  TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  P++VT+++L+  L KSGK + A  MLD M  RGI+PN  TY  +ISGL  + R 
Sbjct: 359  EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL 418

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            DEA  LF  M+  G +P   +Y   ++ + KL   ++AL      +K G +P + + +  
Sbjct: 419  DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS 478

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +  L    R  EA   +  +    + PD V Y +M++  S+AG++  A KLL++M   G 
Sbjct: 479  LYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             PD    N+LI      G +D+A  +   +      P   T+ ILI G+ + G +  A  
Sbjct: 539  EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NP------TLFLRLS 452
            LF  M+++GC P+   FNAL+D LCK   ++ A  +F +M I   +P      T+   L 
Sbjct: 599  LFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLI 658

Query: 453  QGGNRVH--------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL----- 493
            + G   +              D  +L T++      G +  A KI+M+      L     
Sbjct: 659  KEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718

Query: 494  ---------------PDIITY------NS----------LINGFCKVGNINGALKLFKEL 522
                            + I++      NS          LI   CK      A KLF + 
Sbjct: 719  VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKF 778

Query: 523  QLK-GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
                G  P   +Y  L++GL   +  E A ++F +M   GC P+   Y  L+    + ++
Sbjct: 779  TKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKR 838

Query: 582  FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL--NDFQLAP-- 637
                F L+ + L      +  +   I   L K    N+I   L++ +++   DF   P  
Sbjct: 839  IDELFELYNEMLCRGCKPNIITHNIIISALVK---SNSINKALDLYYEIISGDFSPTPCT 895

Query: 638  YTIWLIGLCQDGQVKEALNIFSVL--VECKAIVTPPSCV---KLIHGLCKRGYLDLAMDV 692
            Y   + GL + G+ +EA+ IF  +   +CK     P+C     LI+G  K G +++A D+
Sbjct: 896  YGPLIGGLLKAGRSEEAMKIFEEMPDYQCK-----PNCAIYNILINGFGKAGNVNIACDL 950

Query: 693  FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            F   +K G  +RP + +Y +         +   A H    +K  G D D   Y
Sbjct: 951  FKRMIKEG--IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 192/727 (26%), Positives = 330/727 (45%), Gaps = 70/727 (9%)

Query: 59   RLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            R+R    N    + +IS LL     D   +  + + S  V+  +  + + I  Y K+GD 
Sbjct: 394  RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453

Query: 115  EKALESFGKMKE---------------------------------FDC--QPDVYIYNAV 139
            EKAL++F KMK+                                  +C   PD   YN +
Sbjct: 454  EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513

Query: 140  LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
            +    +      A  +  EM+   C P+I+  + LI+ L K+G+ + A +M   +    +
Sbjct: 514  MKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKL 573

Query: 200  LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             P   TY I+I+GL +  +  +A  LF  MK+SGC P+ V +NALL+  CK   VD AL 
Sbjct: 574  APTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALK 633

Query: 260  LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
            +          P + +Y+ +I GL +  R   A+ +Y +M ++ + PD V    ++ G+ 
Sbjct: 634  MFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVV 692

Query: 320  EAGKVKDAMKLLSD-MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + G+V+DA+K++ + + + G+      +  L++       +++A S    +       + 
Sbjct: 693  KDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDD 752

Query: 379  HTFTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFY 437
            +    LI  +C+     DA+KLF+K  K+ G  P+   +N L+DGL      E A  LF 
Sbjct: 753  NLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFV 812

Query: 438  KME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +M+  G  P +F              +   +++ +  +  I + +++  ++   G  P+I
Sbjct: 813  EMKNAGCCPNIF--------------TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858

Query: 497  ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            IT+N +I+   K  +IN AL L+ E+      P   TYG LI GL +  R E+A +IF +
Sbjct: 859  ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEE 918

Query: 557  MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGE 615
            MP   C P+ A+Y  L+    +    ++A  L+ + +++    D +S   + E L   G 
Sbjct: 919  MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR 978

Query: 616  VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            V++A+    E+     D     Y + + GL +  +++EAL++FS   E K     P    
Sbjct: 979  VDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFS---EMKNRGISPELYT 1035

Query: 676  ---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLL 730
               LI      G +D A  +F      G  L P V  Y  L+R    SK   K  A+ + 
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMG--LEPNVFTYNALIRG--HSKSGNKDRAFSVF 1091

Query: 731  CRMKSVG 737
             +M  VG
Sbjct: 1092 KKMMIVG 1098



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 172/316 (54%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            L+ G       E AL+ F +MK   C P+++ YN +L+   + +       +Y EM+   
Sbjct: 794  LMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG 853

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            C PNI+T +++I+ L KS     A+ +  E+      P   TY  +I GL +  R++EA 
Sbjct: 854  CKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAM 913

Query: 224  RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            ++F +M D  C P+   YN L+NGF K   V+ A  L +   K+G  P L SY+ L++ L
Sbjct: 914  KIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973

Query: 284  FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            F   R D+A  ++ ++    ++PD V Y +MI GL ++ ++++A+ L S+M+ RGI P+ 
Sbjct: 974  FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPEL 1033

Query: 344  YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
            Y YNALI  F + G++DQA  +  E+      PN  T+  LI G  ++G  D A  +F K
Sbjct: 1034 YTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKK 1093

Query: 404  MEKAGCFPSVGMFNAL 419
            M   GC P+ G F  L
Sbjct: 1094 MMIVGCSPNAGTFAQL 1109



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 247/578 (42%), Gaps = 86/578 (14%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    D  WQ    L+   ++     + +LI+G  K G   KAL+ FG MKE
Sbjct: 546  NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKE 605

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL-------- 178
              C P+   +NA+L+   +     LAL ++  M  +NC P+++T++ +I GL        
Sbjct: 606  SGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGY 665

Query: 179  --------------------------SKSGKTEVAIKMLDEMTQRGILPNK--------- 203
                                       K G+ E AIK++ E   +  L            
Sbjct: 666  AFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELME 725

Query: 204  -------------FTYTIVISGLCQIN--------------RADEAYRLFLKMKDS-GCS 235
                         F   +V + +CQ +              +A +A +LF K   S G  
Sbjct: 726  CILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTH 785

Query: 236  PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            P   +YN L++G       + AL L    +  G  P + +Y+ L+D   ++KR DE +  
Sbjct: 786  PTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            Y +M     +P+++ + ++I  L ++  +  A+ L  ++      P    Y  LI G   
Sbjct: 846  YNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLK 905

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
             G  ++A  +  E+      PN   + ILI G  + G V+ A  LF +M K G  P +  
Sbjct: 906  AGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKS 965

Query: 416  FNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L++ L   G ++ A   F ++++ G +P              D  S   M+     +
Sbjct: 966  YTILVECLFMTGRVDDAVHYFEELKLTGLDP--------------DTVSYNLMINGLGKS 1011

Query: 475  GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
              + +A  +  ++   G  P++ TYN+LI  F   G ++ A K+F+ELQ  GL P+  TY
Sbjct: 1012 RRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTY 1071

Query: 535  GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              LI G  +   ++ AF +F +M   GC+P+   +  L
Sbjct: 1072 NALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 187/368 (50%), Gaps = 16/368 (4%)

Query: 174  LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            LI  L K  K   A K+ D+ T+  G  P   +Y  ++ GL   N  + A +LF++MK++
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            GC P+   YN LL+   K +R+DE   L       G  P + +++ +I  L ++   ++A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 293  YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               Y ++      P    YG +I GL +AG+ ++AMK+  +M +    P+   YN LI G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 353  FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            F   G ++ A  L   + K    P+  ++TIL+  +   G VDDA   F +++  G  P 
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 413  VGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
               +N +I+GL K+  LE+A  LF +M+  G +P L+              +   ++  +
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELY--------------TYNALILHF 1043

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
              AG++ +A K+  +L   G  P++ TYN+LI G  K GN + A  +FK++ + G  P++
Sbjct: 1044 GNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNA 1103

Query: 532  VTYGTLIN 539
             T+  L N
Sbjct: 1104 GTFAQLPN 1111



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 78/256 (30%)

Query: 65   SNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
            +++ +IS L+K N      DLY+    E+ SG+ S     +  LI G  K G  E+A++ 
Sbjct: 860  THNIIISALVKSNSINKALDLYY----EIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKI 915

Query: 121  FGKMKEFDCQPDVYIYNAVLN---------IA---FRKQ------------------LFL 150
            F +M ++ C+P+  IYN ++N         IA   F++                   LF+
Sbjct: 916  FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975

Query: 151  LA----LAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP---- 201
                     Y+E +KL  L P+ V+++L+INGL KS + E A+ +  EM  RGI P    
Sbjct: 976  TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035

Query: 202  -------------------------------NKFTYTIVISGLCQINRADEAYRLFLKMK 230
                                           N FTY  +I G  +    D A+ +F KM 
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095

Query: 231  DSGCSPDFVAYNALLN 246
              GCSP+   +  L N
Sbjct: 1096 IVGCSPNAGTFAQLPN 1111


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 264/524 (50%), Gaps = 25/524 (4%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI+ L K        +   E++ G     S  F  LI G+ K GD E+      +M
Sbjct: 166 SYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM 225

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + DV++Y+A+++    K        ++ EM++ N  PN+VT+S L+N L K  K 
Sbjct: 226 EKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKW 285

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A +MLD MT   + P+   YT++  GL +  RA +A ++   M   G  P+ V YNA+
Sbjct: 286 KEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK- 303
           +NG CK  RVD+AL +L +  K G  P + +YS L+ GL    + DEA      +  ++ 
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEF 405

Query: 304 -IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I+PDV  + ++I+ L +  +++ A ++   M ERG   +   YN LI G+   G L +A
Sbjct: 406 HIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465

Query: 363 RSLQVEIWKRDSL-----PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
               +E+WK D++     PN  T+T+LI G+C+  M+  A+ LFNK   +G  P+V  +N
Sbjct: 466 ----LELWK-DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            L+  LC+   +E+A  LF +M             +  N   D  S   +++    AG +
Sbjct: 521 TLMASLCRESSVEQARNLFQEM-------------RNANHDPDVVSFNIIIDGTLKAGDV 567

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A ++L+++     +PD IT++ LIN F K+G ++ A  L++ +   G  PD+V + +L
Sbjct: 568 ESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSL 627

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           + G     + E    +  QM          +  +++   C   K
Sbjct: 628 LKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 15/496 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I    K    +  +  L+E+    +     V+  LISG+   GD E+  E F +M  
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR 262

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  P+V  Y+ ++N   +KQ +  A  +   M      P++V +++L +GLSK+G+   
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD 322

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AIK+LD M +RG  PN  TY  +I+GLC+  R D+A  +   M   G  PD V Y+ L+ 
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVK 382

Query: 247 GFCKLRRVDEALALLRSFEKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           G C + ++DEA+ LL       F   P + +++ +I  L + +R   A   Y  M E   
Sbjct: 383 GLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             ++V Y ++I G   AGK+  A++L  D  + GI P+   Y  LI G C + +L  A+ 
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKG 502

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  +     + P    +  L+  +CR   V+ A+ LF +M  A   P V  FN +IDG  
Sbjct: 503 LFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTL 562

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KAG++E A  L  +M                  V D  +   ++ ++   G + +A  + 
Sbjct: 563 KAGDVESAKELLLEMLNMN-------------LVPDNITFSILINRFLKLGQLDEAASLY 609

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++   G++PD + ++SL+ G+   G     + + +++  K +  DS    T++  L  +
Sbjct: 610 ERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNM 669

Query: 545 DREEDAFRIFGQMPQN 560
            ++ D  +I  +  Q+
Sbjct: 670 SKDVDIEKILPKFSQH 685



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/625 (27%), Positives = 285/625 (45%), Gaps = 23/625 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI    K    +  +    KM      P     +A++      Q    A  V   ++K 
Sbjct: 64  TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               N+  F+LL+ G  +SG +  A+ +   M +  ++P+  +Y  VI+GLC+  R  EA
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             LF +MK   C P+ V ++AL++GFCK   V+E   LL   EK G    +  YS LI G
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                  +     + +M  + + P+VV Y  ++  L +  K K+A ++L  M    + PD
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  L  G    G    A  +   + KR   PN  T+  +I G+C+ G VDDA  +  
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKA----NLLFYKMEIGKNPTLFLRLSQGGNRV 458
            M K G  P V  ++ L+ GLC  G++++A    NLL  K E    P +F          
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSK-EFHIKPDVF---------- 412

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++++ C    +  A ++   + E G   +I+TYN LI+G+   G +  AL+L
Sbjct: 413 ----AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALEL 468

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           +K+    G+ P++ TY  LINGL ++     A  +F +   +G  P+ + Y +LM   CR
Sbjct: 469 WKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCR 528

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
                 A +L+ Q +R+ +   D    +  I+  L+ G+VE+A + LLEM          
Sbjct: 529 ESSVEQARNLF-QEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNI 587

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            ++I +    + GQ+ EA +++  +V C  +        L+ G   +G  +  + +    
Sbjct: 588 TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647

Query: 697 LKNGFILRPRVCNYLLRSLL-FSKD 720
                +L  ++ + +L  L   SKD
Sbjct: 648 ADKDVVLDSKLTSTILACLCNMSKD 672



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 257/522 (49%), Gaps = 31/522 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +L+ G+ + GD  KA++ F  MK     PD   YN V+N   + +  + A  ++ EM 
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN VTFS LI+G  K+G  E    +L+EM + G+  + F Y+ +ISG C     +
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
               LF +M     +P+ V Y+ L+N  CK ++  EA  +L +       P + +Y+ L 
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL +  R  +A      M +   EP+ V Y  +I GL + G+V DA+ +L  M ++G  
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRNGMVDDAQ 398
           PD   Y+ L+KG C +G +D+A  L   +  ++    P+   F ++I  +C+   +  A+
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 399 KLFNKMEKAGCFPS-VGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPT--------- 446
           +++  M + G FPS +  +N LIDG   AG+L KA L  +K  ++ G +P          
Sbjct: 432 RVYYTMVERG-FPSNIVTYNILIDGYLSAGKLTKA-LELWKDAVDSGISPNAATYTVLIN 489

Query: 447 -------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                        LF +    G R    +   T++   C    + +A  +  ++  + + 
Sbjct: 490 GLCKMQMLSIAKGLFNKKRASGTR-PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD 548

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++++N +I+G  K G++  A +L  E+    L PD++T+  LIN   ++ + ++A  +
Sbjct: 549 PDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASL 608

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           + +M   G  P   ++ SL+     + K     S+ LQ + D
Sbjct: 609 YERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSM-LQQMAD 649



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 202/441 (45%), Gaps = 13/441 (2%)

Query: 7   EVLTILDTVT--PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           E   +LDT+T   + P +      ++ T +   + K        +      KR    +  
Sbjct: 287 EAAQMLDTMTGCKVRPDV------VAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNV 340

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + +A+I+ L K    D     L+ +           +  L+ G   VG  ++A++    +
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 125 --KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
             KEF  +PDV+ +N V+    +++    A  VYY MV+     NIVT+++LI+G   +G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+++  +    GI PN  TYT++I+GLC++     A  LF K + SG  P    YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+   C+   V++A  L +        P + S++ +IDG  +A   + A     +M   
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PD + + ++I    + G++ +A  L   M   G VPD   +++L+KG+   G  ++ 
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640

Query: 363 RSLQVEIWKRDSLPNTH-TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            S+  ++  +D + ++  T TIL C +C      D +K+  K  +     +    N L+ 
Sbjct: 641 VSMLQQMADKDVVLDSKLTSTILAC-LCNMSKDVDIEKILPKFSQHTSVGASIKCNELLM 699

Query: 422 GLCKAGELEKANLLFYKMEIG 442
            L K    + AN+L     +G
Sbjct: 700 KLNKV-HPDNANILVANTAMG 719


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 255/499 (51%), Gaps = 32/499 (6%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +++ G  + G   +A+    +M      PD+  YN ++N   + +    A+ +  EM   
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN VT + L++GL K G+ + A+++L+ M ++G   +   Y  +ISG C     D  
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             LF +M   G S + V Y+ L++G C+L +  EA  +L +  + G  P + +Y+ LIDG
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  R   A      M E+  EP  V Y V++ GL + G V DA K+L  M E+G   D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKL 400
              YN L+KG CD G +D+A  L   ++  ++   PN  TF +LI G+C+ G +  A K+
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLF----------- 448
             KM K G   ++  +N L+ G  KAG++++A  L+ + +++G  P  F           
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362

Query: 449 ---LRLSQG---GNRVHDKA----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
              L +++G     R H          T++   C  G + +A  +  ++  +   PDII+
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 422

Query: 499 YNSLINGFCKVGNINGALKLFKELQLK----GLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +N++I+G  K G+     +  KELQ+K    GLRPD++T+ TLIN L ++   ++A    
Sbjct: 423 FNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSAL 478

Query: 555 GQMPQNGCTPSPAVYKSLM 573
            +M  +G TP   VY SL+
Sbjct: 479 ERMVASGFTPDALVYDSLL 497



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 183/600 (30%), Positives = 276/600 (46%), Gaps = 28/600 (4%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N VL    R      A+ +  EM + +  P+IV+++ LINGL K+ K + A+ +L EM  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G  PN  T T ++ GLC+  R DEA  L   MK  G   D V Y  L++GFC    +D 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
              L       G    + +YSCL+ GL R  ++ EA      M E  I PDVV Y  +I 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G+   AM LL+ M E+G  P    YN L+ G C  GL+  A  +   + ++    
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCF-PSVGMFNALIDGLCKAGELEKANL 434
           +  T+  L+ G+C  G VD+A KLFN M +   C  P+V  FN LI GLCK G L KA  
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +  KM         ++    GN V    +   ++     AG I +A ++  Q+ + G +P
Sbjct: 302 IHRKM---------VKKGSCGNLV----TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 348

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +  TY+ LI+GFCK+  +N A  LF E++  GL P    Y TL+  L +    E A  +F
Sbjct: 349 NSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLF 408

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK- 613
            +M    C P    + +++  + +   F     L ++ +      D  +  ++   L K 
Sbjct: 409 QEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKL 468

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF------SVLVECKAI 667
           GE++ A   L  M           Y   L GL   G   E +N+         +++ K +
Sbjct: 469 GELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIV 528

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            T  +C  L H + +   ++L    F  T +   I     CN LL  L  S    ++H +
Sbjct: 529 STILTC--LCHSIQEVDVMELLPTFFQGTSEGASI----SCNELLMQLHQSHPKLQLHPF 582



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 242/491 (49%), Gaps = 17/491 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++  L K    D   + L+ ++         ++  LISG+   G+ ++  E F +M  
Sbjct: 72  TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 131

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                +V  Y+ +++   R   +  A  V   M +    P++VT++ LI+GL K G+   
Sbjct: 132 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 191

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L+ M ++G  P+  TY +++SGLC+     +A+++   M + G   D V YN L+ 
Sbjct: 192 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 251

Query: 247 GFCKLRRVDEALALLRSF--EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           G C   +VDEAL L  S    ++   P + +++ LI GL +  R  +A   +RKM ++  
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 311

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             ++V Y +++ G  +AGK+K+AM+L   + + G VP+++ Y+ LI GFC + +L+ A+ 
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKG 371

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+      P    +  L+  +C+ G ++ A+ LF +M  A C P +  FN +IDG  
Sbjct: 372 LFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTL 431

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG+ +    L  KM E+G  P              D  +  T++ +    G + +A   
Sbjct: 432 KAGDFQFVKELQMKMVEMGLRP--------------DALTFSTLINRLSKLGELDEAKSA 477

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++  SG  PD + Y+SL+ G    G+    + L  ++  KG   D     T++  L  
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537

Query: 544 VDREEDAFRIF 554
             +E D   + 
Sbjct: 538 SIQEVDVMELL 548



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 119/282 (42%), Gaps = 36/282 (12%)

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
           +  +++  C  G + +A  ++ ++      PDI++YN+LING CK   +  A+ L  E++
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G  P+SVT  TL++GL +  R ++A  +   M + G      +Y +L++  C      
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCN----- 115

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
                        +G  D   +  +E L KG   N +                 Y+  + 
Sbjct: 116 -------------NGNLDRGKELFDEMLGKGISANVV----------------TYSCLVH 146

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GLC+ GQ KEA  + + + E        +   LI GLCK G    AMD+    ++ G   
Sbjct: 147 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                N LL  L   K+   + A+ +L  M   G   D   Y
Sbjct: 207 SNVTYNVLLSGL--CKEGLVIDAFKILRMMIEKGKKADVVTY 246



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 81/177 (45%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+R+  ++     +  L++   K G  E+A   F +M   +C+PD+  +N +++   +  
Sbjct: 375 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 434

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            F     +  +MV++   P+ +TFS LIN LSK G+ + A   L+ M   G  P+   Y 
Sbjct: 435 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYD 494

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            ++ GL       E   L  +M   G   D    + +L   C   +  + + LL +F
Sbjct: 495 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 551


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 263/564 (46%), Gaps = 47/564 (8%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSF-------------- 63
           I+   EP    ++ TT+     K   PQVG +    A KR R   F              
Sbjct: 34  IDNGCEP--DVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGD 91

Query: 64  -----------------ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
                             S + VI  L      D   +  +EL++   S     +  +I 
Sbjct: 92  LDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVID 151

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           G  K G  E  L++F +M    C P    Y  V++   + Q+   A  V+ +MV+  C+P
Sbjct: 152 GLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 211

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           + +T++ LI+G SK+ K + A K+LD M  +G  P   TY  ++ G C+++  +EA  + 
Sbjct: 212 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 271

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M++ GC P    + +LL+ +    R +EA  +L      G  P +  Y+ LID LF  
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 331

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R  EA   +  M E+   PD + YG +I+  S+ G V+ A ++L  M + G+ PD + Y
Sbjct: 332 GRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAY 391

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-E 405
           N+L+ G+  L  +DQA  +   +      PN  TF +L+ G+ ++G  D A  LF +M E
Sbjct: 392 NSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLE 451

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K    P++  +  LIDGL KAG + +A L F +M           + +G   + +  +  
Sbjct: 452 KEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM-----------IDRG--IIPECHTYT 498

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +++     AG I +A K++  + + G  PD+  Y++LI G      ++ A  +F+E+  +
Sbjct: 499 SLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKR 558

Query: 526 GLRPDSVTYGTLINGLQRVDREED 549
           G  P+ VTY  L  G +   R  D
Sbjct: 559 GCAPNEVTYKVLRRGFRAAGRALD 582



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/575 (26%), Positives = 269/575 (46%), Gaps = 21/575 (3%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P +  YN V++          A   +  M+   C P+++ F+ LI+G  K+G+ +V  
Sbjct: 3   CEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGH 62

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+L++  +R   P+ F YT VI G C+    D  Y   +  K    S D ++Y  ++ G 
Sbjct: 63  KLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPK---ASLDVISYTTVIKGL 118

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
              +R+DEA  L    +  G  P + +Y+ +IDGL +A R ++    + +M      P  
Sbjct: 119 ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y V+I GL +A  + DA K+   M ++G VPDT  Y  LI GF     +D+AR L   
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDV 238

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   P   T+  ++ G C+  M+++A+++  +M + GC P + +F +L+      G 
Sbjct: 239 MLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR 298

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            E+A  +  +M   G  P + L  S              +++   + G + +A  +   +
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTS--------------LIDLLFSTGRVPEARHVFDSM 344

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PD +TY ++I  F K+GN+  A ++ + +   G+ PD   Y +L++G  +++R 
Sbjct: 345 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 404

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR--DISGRDDESMK 605
           + AF ++ +M  +G  P+   +  LM    +  K   AFSL+ + L   ++         
Sbjct: 405 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTI 464

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I+   + G V  A     EM  +    +   YT  +  L + G++ EA  +   +V+  
Sbjct: 465 LIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG 524

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
                 +   LI GL     +D A DVF   +K G
Sbjct: 525 VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 559



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 256/577 (44%), Gaps = 75/577 (12%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  P   +Y  VISGL  I++ DEAY+ F  M D+GC PD +A+  L++GFCK  +    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             LL    K  F P +  Y+ +I G  +A   D  Y  +R +   K   DV+ Y  +I+G
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGY--FRAV-TPKASLDVISYTTVIKG 117

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L+++ ++ +A +L  +++  G  P+   Y A+I G    G ++       E+     +P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLF 436
             T+T++I G+C+  M+ DA K+F +M + GC P    +  LIDG  KA ++++A  LL 
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHD----------KASLQTMVEQYCTAGLI--------- 477
             +  G  PT        G+ VH           K  +  M E+ C  GL          
Sbjct: 238 VMLTKGPEPTAVTY----GSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 478 ------HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
                  +AY++L ++   G  PD+I Y SLI+     G +  A  +F  +  KG  PD+
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TYGT+I    ++   E A  I   M ++G  P    Y SLM    +  +   AF ++  
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY-- 411

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                           +  +  G   NA+                 + + + GL +DG+ 
Sbjct: 412 ----------------DRMVASGIKPNAVT----------------FNVLMHGLFKDGKT 439

Query: 652 KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
             A ++F  ++E + +  PP+ V    LI GL K G +  A   F   +  G I      
Sbjct: 440 DRAFSLFKEMLEKEEV--PPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             L+ SL  +K  +   A  L+  M  +G + D   Y
Sbjct: 498 TSLIYSL--AKAGRIPEAKKLVEDMVKLGVNPDVQAY 532



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 274/605 (45%), Gaps = 56/605 (9%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  S + VIS L   +  D  ++  + +           F  LI G+ K G  +   +  
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 122 GK-MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            + +K F  +PDV++Y +V++   +          Y+  V      ++++++ +I GL+ 
Sbjct: 66  NQALKRF--RPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLAD 120

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           S + + A ++ +E+   G  PN   YT VI GL +  R ++  + F +M  S C P    
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y  +++G CK + + +A  +     + G VP   +Y+ LIDG  +A + DEA      M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  EP  V YG ++ G  +   + +A ++++ MRERG  P  + + +L+  +   G  +
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  E+  R   P+   +T LI  +   G V +A+ +F+ M + GC P    +  +I
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
               K G +E A  +   M + G  P  F              +  ++++ Y     + +
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCF--------------AYNSLMDGYVKLERVDQ 406

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE-LQLKGLRPDSVTYGTLI 538
           A+ +  ++  SG  P+ +T+N L++G  K G  + A  LFKE L+ + + P  V+Y  LI
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +GL +  R  +AF  F +M   G  P    Y SL+        +SLA           +G
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI--------YSLA----------KAG 508

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           R  E+ K +E+ ++ G V   +Q                Y+  + GL     V  A ++F
Sbjct: 509 RIPEAKKLVEDMVKLG-VNPDVQA---------------YSALITGLIDSSMVDTAWDVF 552

Query: 659 SVLVE 663
             +++
Sbjct: 553 QEMMK 557



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 157/382 (41%), Gaps = 63/382 (16%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P   ++  +I G+     +D+A K FN M   GC P V  F  LI G CKAG+ +  + L
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +      P +FL  S              ++  YC AG +   Y     +    +L D
Sbjct: 65  LNQALKRFRPDVFLYTS--------------VIHGYCKAGDLDTGY--FRAVTPKASL-D 107

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +I+Y ++I G      I+ A +LF+EL+  G  P+ V Y  +I+GL +  R ED  + F 
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M  + C P+   Y  ++   C+            Q L D       + K  E+ +QKG 
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKA-----------QMLPD-------ACKVFEQMVQKGC 209

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           V + I                 YT  + G  +  ++ EA  +  V++      T  +   
Sbjct: 210 VPDTIT----------------YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGS 253

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN---YLLRSLL--FSKDNKKVHAYHLL 730
           ++HG CK   ++ A +V          +R R C    ++  SLL  +    +   AY +L
Sbjct: 254 IVHGFCKLDMINEAKEVIAQ-------MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 306

Query: 731 CRMKSVGYDLDACLYPKTKSLL 752
             M + G   D  LY     LL
Sbjct: 307 TEMTARGCAPDVILYTSLIDLL 328



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 2/205 (0%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA NS ++   +K    D  +   D + +  +   +  F VL+ G +K G  ++A   F 
Sbjct: 389 FAYNS-LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447

Query: 123 KMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           +M E  +  P +  Y  +++   +      A   + EM+    +P   T++ LI  L+K+
Sbjct: 448 EMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKA 507

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+   A K++++M + G+ P+   Y+ +I+GL   +  D A+ +F +M   GC+P+ V Y
Sbjct: 508 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 567

Query: 242 NALLNGFCKLRRVDEALALLRSFEK 266
             L  GF    R  +  A+ + F +
Sbjct: 568 KVLRRGFRAAGRALDLEAVKQHFSQ 592


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 180/679 (26%), Positives = 321/679 (47%), Gaps = 16/679 (2%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V+   L+ +  D +     ++    VS  +    +LI+G    G  E A E F KM    
Sbjct: 122 VLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKG 181

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P+ + +  ++    R  L + AL +   M      PN V ++ LI+   + G+ E A 
Sbjct: 182 CRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAE 241

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK---DSGC-SPDFVAYNAL 244
           ++++ M + G+ P+  T+   IS LC   +  EA R+F  M+   + G   P+   +N +
Sbjct: 242 RLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLM 301

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L GFCK   ++EA  L+ S +++G +  L SY+  + GL R  +  EA    ++M ++ I
Sbjct: 302 LEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGI 361

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EP++  +  ++ GL + G + DA  ++  M   GI PDT  Y+ L+ G C  G + +A +
Sbjct: 362 EPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANN 421

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  E+ +R   PNT+T  IL+  + + G + +A+KL  KM +          N +IDGLC
Sbjct: 422 ILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLC 481

Query: 425 KAGELEKANLLFYKMEIGKNPTL------FLRL----SQGGNRVHDKASLQTMVEQYCTA 474
           K+G+L++A  +   M I  +  L      F+ L    S G   + D  +   ++   C A
Sbjct: 482 KSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKA 541

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K  +++      PD I Y++ I+ FCK G I+ A ++ K+++ +G      TY
Sbjct: 542 GRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTY 601

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            +LI GL   ++  + + +   M + G TP+   Y ++++  C   +   A SL  + L+
Sbjct: 602 NSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQ 661

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                +  S + + +   K      ++ + E+   +   + A Y++    L   G+V EA
Sbjct: 662 KGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEA 721

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +F   ++    +       LI  LCK   L+ A D+    +  G+   P     ++  
Sbjct: 722 KELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDG 781

Query: 715 LLFSKDNKKVHAYHLLCRM 733
           L   K  KK  A  L  RM
Sbjct: 782 L--GKRGKKHDADELAERM 798



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 270/587 (45%), Gaps = 60/587 (10%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P +  +++++    +  K +    +  +M   G+ P  +T  ++I+GLC   R ++A  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM   GC P+  ++  L+ G+C+      AL LL      G  P    Y+ LI    R
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR---ERGIV-P 341
             R +EA     +M E+ + PDVV +   I  L  AGK+ +A ++  DM+   E G+  P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   +N +++GFC  G+L++A++L   + +  +L    ++ I + G+ RNG + +AQ   
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---- 454
            +M   G  P++  FN ++DGLCK G +  A ++   M    IG +   +  L  G    
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 455 GNRVHDKASLQTMVEQYCT---------------AGLIHKAYKILMQLAESGNLPDIITY 499
           G  +     L  M+ + C+                G I +A K+L ++ E     D +T 
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLR-----------------------PDSVTYGT 536
           N +I+G CK G ++ A+++ + + + G                         PD +TY  
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +INGL +  R ++A + F +M      P   +Y + +   C+  K S AF    + L+D+
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAF----RVLKDM 589

Query: 597 SGRD-DESMKSIEEFLQKGEVENA---IQGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQV 651
             R  ++S+++    +     +N    I GLL +M  K     +  Y   +  LC+ G++
Sbjct: 590 EKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRI 649

Query: 652 KEALNIFSVLVECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTL 697
           K+A ++   +++ K I    S  + LI   CK     +  +VF   L
Sbjct: 650 KDATSLLDEMLQ-KGISPNISSFRLLIKAFCKASDFGVVKEVFEIAL 695



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 203/432 (46%), Gaps = 50/432 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G    G   KA     +M    C P+ Y  N +L+  +++     A  +  +M
Sbjct: 402 TYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKM 461

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--------------------- 198
            + +   + VT +++I+GL KSGK + A+++++ M   G                     
Sbjct: 462 NERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNG 521

Query: 199 --ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
              LP+  TY+I+I+GLC+  R DEA + F++M      PD + Y+  ++ FCK  ++  
Sbjct: 522 KKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISS 581

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  +L+  EK G    L +Y+ LI GL    +  E Y     M E+ I P++  Y  MI 
Sbjct: 582 AFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMIS 641

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC---DLGLLDQARSLQVEIWKRD 373
            L E G++KDA  LL +M ++GI P+   +  LIK FC   D G++ +   + + I    
Sbjct: 642 CLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHK 701

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF--NALIDGLCKAGELEK 431
               +  F  L+ G    G V +A++LF+      CF  +G F  N LI+ LCK   LE 
Sbjct: 702 EALYSLMFNELLIG----GEVSEAKELFDAALDR-CF-DLGNFQYNDLIEKLCKDEMLEN 755

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI---LMQLA 488
           A+ + +KM I K           G R  D AS   +++     G  H A ++   +M +A
Sbjct: 756 ASDILHKM-IDK-----------GYRF-DPASFMPVIDGLGKRGKKHDADELAERMMDMA 802

Query: 489 ESGNLPDIITYN 500
             G + + IT N
Sbjct: 803 SEGMVENKITRN 814



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 15/236 (6%)

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            N P +  YN ++    +   ++    L+K++ + G+ P++ T   LI GL    R EDA
Sbjct: 111 ANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDA 170

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IE 608
             +F +M   GC P+   +  L+   CR      A  L L  +     + ++ + +  I 
Sbjct: 171 REVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALEL-LDGMGSFGVQPNKVIYNTLIS 229

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVEC 664
            F ++G  E A + L+E   ++ +  L P    +   +  LC  G++ EA  IF  +   
Sbjct: 230 SFCREGRNEEA-ERLVE---RMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQID 285

Query: 665 KAIVTPPSCVK----LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           + +  P   +     ++ G CK G L+ A  +     +NG ++     N  L  L+
Sbjct: 286 EELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLV 341


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 235/468 (50%), Gaps = 15/468 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY K G+ ++  +   +M+   C+ DV  YNA++N   +      A   +  M
Sbjct: 225 TFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAM 284

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   + N+VTFS  ++   K G    A+K+  +M  RG+  N+FTYT +I G C+  R 
Sbjct: 285 KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRL 344

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L  +M   G   + V Y  L++G CK R+V EA  +LR  EK G       Y+ L
Sbjct: 345 DDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G F  K  ++A     +M  + +E D+ LYG +I+GL    K+ +A  LL+ M E G+
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  ++      G + +A ++  +I      PN  T+  LI G+C+ G +D+A  
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            FNKM   G  P+V  + AL+DGLCK G L +A  LF +M + K  +L            
Sbjct: 525 HFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEM-VHKGMSL------------ 571

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           DK     +++ Y   G +H A+ +  ++ +SG   D+  Y   I+GFC +  +  A ++F
Sbjct: 572 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVF 631

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ--NGCTPS 565
            E+   G+ PD   Y  LI+  Q++   E+A  +  +M +    CT S
Sbjct: 632 SEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDS 679



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 243/476 (51%), Gaps = 15/476 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F ++I    K G+  +A   F +MKE  C PDV  +N++++   +         +  EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C  ++VT++ LIN   K G+ E A      M + G++ N  T++  +   C+    
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +LF +M+  G + +   Y  L++G CK  R+D+A+ LL    + G    + +Y+ L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL + ++  EA    R M +  +  + +LY  +I G       + A+ LLS+M+ +G+
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   Y ALI+G C++  LD+A+SL  ++ +    PN   +T ++    ++G V +A  
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +  K+  +G  P+V  + ALIDGLCKAG +++A   F KM ++G +P +           
Sbjct: 490 MLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV----------- 538

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   +V+  C  G +++A ++  ++   G   D + Y +L++G+ K GN++ A  L
Sbjct: 539 ---QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL 595

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
             ++   GL+ D   Y   I+G   ++   +A  +F +M  +G  P  AVY  L++
Sbjct: 596 KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIS 651



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 255/529 (48%), Gaps = 18/529 (3%)

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           + + +L++   + L   A+     + +L   PN  T + ++  L++     +  ++ +++
Sbjct: 124 VVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQL 183

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
                 PN FT+ IVI  LC+     EA  LF +MK+ GC PD V +N+L++G+ K   +
Sbjct: 184 PA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DE   L+    + G    + +Y+ LI+   +  R + AY ++  M  E +  +VV +   
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +    + G V++AMKL + MR RG+  + + Y  LI G C  G LD A  L  E+ ++  
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             N  T+T+L+ G+C+   V +A+ +   MEKAG   +  ++  LI G       EKA  
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L  +M   KN  L L +S  G           +++  C    + +A  +L ++ ESG  P
Sbjct: 420 LLSEM---KNKGLELDISLYG----------ALIQGLCNVHKLDEAKSLLTKMDESGLEP 466

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + I Y ++++   K G +  A+ + +++   G +P+ +TY  LI+GL +    ++A   F
Sbjct: 467 NYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHF 526

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M   G  P+   Y +L+   C+    + A  L+ + +      D     + ++ +L++
Sbjct: 527 NKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQ 586

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           G + +A     +M        L  YT ++ G C    + EA  +FS ++
Sbjct: 587 GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMI 635



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 15/446 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D   Q ++E+R          +  LI+ + K G  E A   F  MK      +V  ++ 
Sbjct: 239 LDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFST 298

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
            ++   ++ L   A+ ++ +M       N  T++ LI+G  K+G+ + AI +LDEM ++G
Sbjct: 299 FVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQG 358

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  N  TYT+++ GLC+  +  EA  +   M+ +G   + + Y  L++G    +  ++AL
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKAL 418

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL   +  G    +  Y  LI GL    + DEA +   KM E  +EP+ ++Y  M+   
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            ++GKV +A+ +L  + + G  P+   Y ALI G C  G +D+A S   ++      PN 
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +T L+ G+C+NG +++A +LFN+M   G      ++ AL+DG  K G L  A  L  K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAK 598

Query: 439 M-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M + G    LF                   +  +C   ++ +A ++  ++   G  PD  
Sbjct: 599 MIDSGLQLDLF--------------CYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRA 644

Query: 498 TYNSLINGFCKVGNINGALKLFKELQ 523
            YN LI+ + K+GN+  A+ L  E++
Sbjct: 645 VYNCLISKYQKLGNLEEAISLQDEME 670



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 230/522 (44%), Gaps = 53/522 (10%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R   ++++    P+    N +L    +L R D +  L+R   +    P + +++ +
Sbjct: 139 DDAVRAVARVRELRVPPNTRTCNHIL---LRLAR-DRSGRLVRRLFEQLPAPNVFTFNIV 194

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L +     EA + + +M E    PDVV +  +I G  + G++ +  +L+ +MR  G 
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YNALI  FC  G ++ A      + +   + N  TF+  +   C+ G+V +A K
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMK 314

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF +M   G   +   +  LIDG CKAG L+ A +L  +M     P              
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------------- 361

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +   +V+  C    + +A  +L  + ++G   + + Y +LI+G     N   AL L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E++ KGL  D   YG LI GL  V + ++A  +  +M ++G  P+  +Y ++M  +C +
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD-ACFK 480

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                            SG+  E++  +++ L  G   N I                 Y 
Sbjct: 481 -----------------SGKVPEAIAMLQKILDSGFQPNVIT----------------YC 507

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + GLC+ G + EA++ F+ + +        +   L+ GLCK G L+ A+ +F   +  
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           G  L   V   LL   L  K      A+ L  +M   G  LD
Sbjct: 568 GMSLDKVVYTALLDGYL--KQGNLHDAFALKAKMIDSGLQLD 607



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 6/368 (1%)

Query: 59  RLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R+R  A N    + L+    K    D     LDE+    V +    + VL+ G  K    
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            +A +    M++   + +  +Y  +++  F  +    AL +  EM       +I  +  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I GL    K + A  +L +M + G+ PN   YT ++    +  +  EA  +  K+ DSG 
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ + Y AL++G CK   +DEA++        G  P + +Y+ L+DGL +    +EA  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + +  D V+Y  ++ G  + G + DA  L + M + G+  D +CY   I GFC
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFC 619

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           +L ++ +AR +  E+      P+   +  LI    + G +++A  L ++ME+    PS  
Sbjct: 620 NLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV--LPSCT 677

Query: 415 MFNALIDG 422
             +   DG
Sbjct: 678 DSDTATDG 685



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 163/416 (39%), Gaps = 91/416 (21%)

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + L+    D GLLD A      + +    PNT T   ++  + R+      ++LF ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
               P+V  FN +ID L                                           
Sbjct: 186 ----PNVFTFNIVIDFL------------------------------------------- 198

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
                C  G + +A  +  ++ E G LPD++T+NSLI+G+ K G ++   +L +E++  G
Sbjct: 199 -----CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG 253

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            + D VTY  LIN   +  R E A+  F  M + G   +   + + +   C+        
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK-------- 305

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                      G   E+MK   +   +G               LN+F    YT  + G C
Sbjct: 306 ----------EGLVREAMKLFAQMRVRG-------------MALNEFT---YTCLIDGTC 339

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G++ +A+ +   +V     +   +   L+ GLCK   +  A DV     K G      
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
           +   L+     +K+++K  A  LL  MK+ G +LD  LY    +L+ G  N  +++
Sbjct: 400 LYTTLIHGHFMNKNSEK--ALGLLSEMKNKGLELDISLY---GALIQGLCNVHKLD 450


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 253/490 (51%), Gaps = 32/490 (6%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           ++ +N +L    + + +    ++Y +M      P+++T ++LIN L    +    +  + 
Sbjct: 91  IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
            + +RG +P+  T+T +I GLC  +R  EA +LF++M+  GC+P+ V Y  L+ G C L 
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210

Query: 253 RVDEALALLRSFEKDG--FV----PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            ++ AL   +    D   +V    P + SYS +IDGL +   ++EA   + +M ++ ++P
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP 270

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +VV + V+I  L + G+V  A KLL  M + GIVP+ + Y +LIKGFC +G L+ A+ L 
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           V +  +   P+  ++ +LI G C+   V++A KLFN+M   G +P V     L+  L  A
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390

Query: 427 GELEKANLLF-----YKME------------IGKNPTLFLRLS-----QGGNRVHDKASL 464
           G+++ A  LF     Y M             + KN  +F  +      +  N   D  + 
Sbjct: 391 GKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETF 450

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++  C AG +  A+++  +L E G  PD + Y+S+I+GFCK G ++ A  LF++++ 
Sbjct: 451 GCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEE 510

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  PD +TY  L+ G    ++ E   ++  +M +    P   +Y  +    C+  K   
Sbjct: 511 NGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEK--- 567

Query: 585 AFSLWLQYLR 594
            +  WL  L+
Sbjct: 568 -YKEWLDLLQ 576



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 219/443 (49%), Gaps = 27/443 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDV  +  ++     +   + A  ++  M KL C PN+VT+  LI GL   G   +A+K 
Sbjct: 159 PDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKW 218

Query: 191 LDEMTQR------GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             EM            PN  +Y+I+I GLC++   +EA  LF +M D G  P+ V ++ L
Sbjct: 219 HQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVL 278

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  CK  +V +A  LL    + G VP L +Y+ LI G       + A   +  M  +  
Sbjct: 279 IDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGY 338

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EPDV+ Y ++I G  +  KV++AMKL ++M   G+ PD      L+K     G +D A+ 
Sbjct: 339 EPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKE 398

Query: 365 LQVEIWKRDSLPNTHTF-TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           L   + K  ++P       I + G+C+NG + +A KLFN++E       +  F  LIDGL
Sbjct: 399 L-FRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGL 457

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CKAG+LE A  LF K+ E G  P              D  +  +M+  +C  G + KA  
Sbjct: 458 CKAGKLETAWELFEKLYEEGIQP--------------DAMAYSSMIHGFCKKGQVDKANI 503

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  ++ E+G  PD+ITY+ L+ GF +   +   ++L   +  K + PD   Y  + + + 
Sbjct: 504 LFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVC 563

Query: 543 RVDREEDAF----RIFGQMPQNG 561
           + ++ ++      R F Q  +NG
Sbjct: 564 KDEKYKEWLDLLQRFFVQKHRNG 586



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 184/342 (53%), Gaps = 6/342 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKE------FDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           LI G   +G+   AL+   +M        F+C+P+V  Y+ +++   +   +  A+ ++ 
Sbjct: 202 LIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFN 261

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EMV     PN+VTFS+LI+ L K G+   A K+L+ M Q GI+PN FTYT +I G C + 
Sbjct: 262 EMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVG 321

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             + A  LF+ M   G  PD ++YN L+NG+CK  +V+EA+ L       G  P + +  
Sbjct: 322 DLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSG 381

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+  LF A + D+A   +R +    +  D+ +  + + GL + G + +AMKL +++   
Sbjct: 382 VLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESY 441

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            +  D   +  LI G C  G L+ A  L  ++++    P+   ++ +I G C+ G VD A
Sbjct: 442 NMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKA 501

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
             LF KME+ GC P +  ++ L+ G  ++ +LEK   L ++M
Sbjct: 502 NILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRM 543



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 65/476 (13%)

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           F++  +++GL +I    + + L+ +M  +G  PD +  N L+N  C + R++E LA +  
Sbjct: 92  FSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAG 151

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G++P + +++ LI GL    R  EA   + +M +    P+VV YG +I+GL   G 
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 324 VKDAMK-----------------------------------------LLSDMRERGIVPD 342
           +  A+K                                         L ++M ++G+ P+
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              ++ LI   C  G + +A+ L   + +   +PN  T+T LI G C  G ++ A++LF 
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV 331

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG-----KNPTLFLRLSQGGN 456
            M   G  P V  +N LI+G CK  ++E+A  LF +M  +G     K   + L+      
Sbjct: 332 SMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG 391

Query: 457 RVHDKASLQTMVEQY----------------CTAGLIHKAYKILMQLAESGNLP-DIITY 499
           +V D   L  +++ Y                C  G I +A K+  +L ES N+  DI T+
Sbjct: 392 KVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL-ESYNMKLDIETF 450

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             LI+G CK G +  A +LF++L  +G++PD++ Y ++I+G  +  + + A  +F +M +
Sbjct: 451 GCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEE 510

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           NGC+P    Y  LM       K      L  + +      DD     +E+ + K E
Sbjct: 511 NGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDE 566



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 220/468 (47%), Gaps = 26/468 (5%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           S++ L+ GL + + Y + ++ Y++M    + PD++   ++I  L    ++ + +  ++ +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             RG +PD   +  LIKG C    + +A  L + + K    PN  T+  LI G+C  G +
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 395 DDAQKLFNKMEKA------GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           + A K   +M          C P+V  ++ +IDGLCK G  E+A  LF +M + G  P +
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          +   +++  C  G + KA K+L  + + G +P++ TY SLI GFC
Sbjct: 273 --------------VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFC 318

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
            VG++N A +LF  +  KG  PD ++Y  LING  +  + E+A ++F +M   G  P   
Sbjct: 319 LVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLE 625
               L+       K   A  L+ + ++  +   D  +  I  +   + G +  A++   E
Sbjct: 379 TSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNE 437

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           ++       +  +   + GLC+ G+++ A  +F  L E        +   +IHG CK+G 
Sbjct: 438 LESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQ 497

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
           +D A  +F    +NG    P +  Y +    F + NK      LL RM
Sbjct: 498 VDKANILFQKMEENG--CSPDLITYSILMRGFYESNKLEKVVQLLHRM 543



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 162/347 (46%), Gaps = 39/347 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  KVG+ E+A+  F +M +   QP+V  ++ ++++  ++   + A  +   M+
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMI 299

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           ++  +PN+ T++ LI G    G    A ++   M  +G  P+  +Y ++I+G C+  + +
Sbjct: 300 QIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVE 359

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALL----------------------------------- 245
           EA +LF +M   G  PD      LL                                   
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFL 419

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G CK   + EA+ L    E       + ++ CLIDGL +A + + A+  + K++EE I+
Sbjct: 420 DGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQ 479

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD + Y  MI G  + G+V  A  L   M E G  PD   Y+ L++GF +   L++   L
Sbjct: 480 PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQL 539

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRN----GMVDDAQKLFNKMEKAG 408
              + ++D  P+   + I+   +C++      +D  Q+ F +  + G
Sbjct: 540 LHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHRNG 586



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 4/144 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +EL S N+ +  + F  LI G  K G  E A E F K+ E   QPD   Y+++++   +
Sbjct: 435 FNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCK 494

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K     A  ++ +M +  C P+++T+S+L+ G  +S K E  +++L  M ++ + P+   
Sbjct: 495 KGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGI 554

Query: 206 YTIVISGLCQINRADEAYRLFLKM 229
           Y IV   +C+    DE Y+ +L +
Sbjct: 555 YAIVEDMVCK----DEKYKEWLDL 574


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 276/564 (48%), Gaps = 55/564 (9%)

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           D +PDVY Y  V+N   +    + AL V+ EM +   +P+++ ++++I+G  K G     
Sbjct: 179 DLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQG 238

Query: 188 IKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            ++ + + +   + PN  TY ++I+GLC++ R DE+  ++ +MK + C  D   Y++L+ 
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLIC 298

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C +  VD A+ + +   K   V  + +Y+ L++G  RA +  E++  +  M +E    
Sbjct: 299 GLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH- 357

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +VV Y + IRGL E  KV++A+ +   +R RG   D+  Y  LI G C  G L++A  + 
Sbjct: 358 NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKIL 417

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E        +   ++ ++ G+ + G VD+A  + ++M+K GC  S  + N LI+G  +A
Sbjct: 418 KEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRA 477

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            +LE+A   F +ME  G +PT+               S  T++   C A     AY  + 
Sbjct: 478 SKLEEAICFFREMETKGCSPTV--------------VSYNTLINGLCKAERFSDAYSFVK 523

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ E    PD+ITY+ L++G C+   I+ AL L++++ +KGL PD   +  L++GL    
Sbjct: 524 EMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAG 583

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + EDA  ++  M Q+ C P+   + +LM    + R+  +A  +W    +           
Sbjct: 584 KIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFK----------- 632

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                                    N FQ  +  Y I L GLC  G++ + + +F   ++
Sbjct: 633 -------------------------NGFQPDIISYNITLKGLCSCGRISDGIALFDDALK 667

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLD 687
              + T  +   L+  + K G LD
Sbjct: 668 NGILPTSITWYILVRAVLKLGPLD 691



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 251/516 (48%), Gaps = 44/516 (8%)

Query: 209 VISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           V+    +    +EA   F KM++  GC P   +YNALLN F +   +++A + L  FE  
Sbjct: 84  VLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV 143

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P L +Y+ LI    + +++ EA      M+ + ++PDV  YG +I G+ ++G +  A
Sbjct: 144 GILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSA 203

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFT 382
           +++  +M ERG+VPD  CYN +I GF   G   Q +    EIW+R        PN  T+ 
Sbjct: 204 LEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGK----EIWERLVKGSCVYPNVVTYN 259

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--- 439
           ++I G+C+ G  D++ +++ +M+K  C   +  +++LI GLC  G ++ A  ++ +M   
Sbjct: 260 VMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319

Query: 440 -----------------EIGKNPTLF-LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
                              GK    F L +  G    H+  S    +        + +A 
Sbjct: 320 SVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAI 379

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +   L   G+  D  TY  LI+G CK G++N ALK+ KE +  G + D+  Y ++++GL
Sbjct: 380 SVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGL 439

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  R ++A  I  QM + GC  SP V   L+    R  K   A   + +          
Sbjct: 440 SKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTV 499

Query: 602 ESMKSIEEFLQKGE----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            S  ++   L K E      + ++ +LE D+K +   +  Y++ + GLCQ  ++  ALN+
Sbjct: 500 VSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPD---MITYSLLMDGLCQGKKIDMALNL 556

Query: 658 F-SVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAM 690
           +  VLV+    + P   +   L+HGLC  G ++ A+
Sbjct: 557 WRQVLVKG---LEPDVTMHNILMHGLCSAGKIEDAL 589



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 231/480 (48%), Gaps = 53/480 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L K   FD   +  + ++     +    +  LI G   VG+ + A+E + +M +
Sbjct: 259 NVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVK 318

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                DV  YNA+LN   R      +  ++  M K NC  N+V++++ I GL ++ K E 
Sbjct: 319 RSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEE 377

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI + + + +RG   +  TY ++I GLC+    ++A ++  + KD G   D  AY+++++
Sbjct: 378 AISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVD 437

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKI 304
           G  K  RVDEAL ++   +K G    L  + C  LI+G  RA + +EA  ++R+M  +  
Sbjct: 438 GLSKQGRVDEALGIVHQMDKYGC--ELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P VV Y  +I GL +A +  DA   + +M E+   PD   Y+ L+ G C    +D A +
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALN 555

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++  +   P+     IL+ G+C  G ++DA  L++ M+++ C P++   N L+DGL 
Sbjct: 556 LWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY 615

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KA E E A++++  M                                             
Sbjct: 616 KARECEMASVIWACM--------------------------------------------- 630

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
               ++G  PDII+YN  + G C  G I+  + LF +    G+ P S+T+  L+  + ++
Sbjct: 631 ---FKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKL 687



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 189/399 (47%), Gaps = 36/399 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L      D   +   E+   +V V    +  L++G+ + G  +++ E +  M +
Sbjct: 294 SSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGK 353

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +C  +V  YN  +   F  +    A++V+  + +     +  T+ +LI+GL K+G    
Sbjct: 354 ENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNK 412

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL--------------------- 225
           A+K+L E    G   + F Y+ ++ GL +  R DEA  +                     
Sbjct: 413 ALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLIN 472

Query: 226 --------------FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                         F +M+  GCSP  V+YN L+NG CK  R  +A + ++   +  + P
Sbjct: 473 GFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKP 532

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +YS L+DGL + K+ D A   +R++  + +EPDV ++ +++ GL  AGK++DA+ L 
Sbjct: 533 DMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLY 592

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M++   +P+   +N L+ G       + A  +   ++K    P+  ++ I + G+C  
Sbjct: 593 SNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSC 652

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           G + D   LF+   K G  P+   +  L+  + K G L+
Sbjct: 653 GRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLD 691



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 164/322 (50%), Gaps = 2/322 (0%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNS--AVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           +N +V     +W   R+R     S +   +I  L K    +   + L E + G   + + 
Sbjct: 371 ENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAF 430

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G  K G  ++AL    +M ++ C+   ++ N ++N   R      A+  + EM
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM 490

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P +V+++ LINGL K+ +   A   + EM ++   P+  TY++++ GLCQ  + 
Sbjct: 491 ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKI 550

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  L+ ++   G  PD   +N L++G C   ++++AL L  + ++   +P L +++ L
Sbjct: 551 DMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTL 610

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL++A+  + A   +  MF+   +PD++ Y + ++GL   G++ D + L  D  + GI
Sbjct: 611 MDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGI 670

Query: 340 VPDTYCYNALIKGFCDLGLLDQ 361
           +P +  +  L++    LG LD 
Sbjct: 671 LPTSITWYILVRAVLKLGPLDS 692


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 264/559 (47%), Gaps = 76/559 (13%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P+++ ++ ++  LS +  T  A +  D M   G+ PN +TY I++  LC      EA  
Sbjct: 153 VPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +   M+ +GC P+ V YN L+  F +   VD A  L+    + G  P L +++ +++G+ 
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A + ++A   + +M  E + PD V Y  ++ G  +AG   +A+ + ++M ++GI+PD  
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            + +LI   C  G L++A +L  ++ +R    N  TFT LI G C+ G +DDA      M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKAS 463
           ++    PSV  +NALI+G C  G +++A  L ++ME  G  P              D  +
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP--------------DVVT 437

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN----------------------- 500
             T++  YC     H A+++  Q+ E G LPD ITY+                       
Sbjct: 438 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI 497

Query: 501 ------------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
                       SLI+G CK GN+  AL L  ++   G+ PD VTY  LINGL +  R  
Sbjct: 498 KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 557

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           +A ++  ++      P+   Y +LM   CR+ +     +L                  ++
Sbjct: 558 EAQQLLFKLYHEDPIPANTKYDALM-HCCRKAELKSVLAL------------------LK 598

Query: 609 EFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            F  KG   E +   Q +L+ ++ L+    + Y++ + G C+ G V +AL+    +++  
Sbjct: 599 GFCMKGLMNEADKVYQSMLDRNWNLDG---SVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655

Query: 666 AIVTPPSCVKLIHGLCKRG 684
                 S + LI GL + G
Sbjct: 656 FAPNSTSTISLIRGLFENG 674



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 234/494 (47%), Gaps = 41/494 (8%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D + S  V+     + +L+      G  ++AL     M+   C P+V  YN ++   FR 
Sbjct: 179 DSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRA 238

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +   M +    PN+VTF+ ++NG+ K+GK E A K+ DEM + G+ P+  +Y
Sbjct: 239 GEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSY 298

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ G C+   + EA  +F +M   G  PD V + +L++  CK   ++ A+ L+R   +
Sbjct: 299 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRE 358

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G      +++ LIDG  +    D+A    R M + +I+P VV Y  +I G    G++ +
Sbjct: 359 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDE 418

Query: 327 AMKLLSDMR-----------------------------------ERGIVPDTYCYNALIK 351
           A +LL +M                                    E+G++PD   Y++LI+
Sbjct: 419 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 478

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C    L  A  L   + K    P+  T+T LI G C+ G V+ A  L +KM KAG  P
Sbjct: 479 VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM----EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
            V  ++ LI+GL K+    +A  L +K+     I  N T +  L     +   K+ L  +
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN-TKYDALMHCCRKAELKSVL-AL 596

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ +C  GL+++A K+   + +     D   Y+ LI+G C+ GN+  AL   K++   G 
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656

Query: 528 RPDSVTYGTLINGL 541
            P+S +  +LI GL
Sbjct: 657 APNSTSTISLIRGL 670



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 240/520 (46%), Gaps = 46/520 (8%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSF----EKDGFVPRLGSYSCLIDGLFRAKR 288
           G  P  +AYNA+L     L   D +L   R F      DG  P + +Y+ L+  L     
Sbjct: 151 GYVPSVLAYNAVL-----LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGH 205

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA +  R M      P+VV Y  ++     AG+V  A +L+  MRE G+ P+   +N+
Sbjct: 206 RKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNS 265

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++ G C  G ++ AR +  E+ +    P+  ++  L+ G C+ G   +A  +F +M + G
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  F +LI  +CKAG LE+A             TL  ++ + G ++ ++ +   ++
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERA------------VTLVRQMRERGLQM-NEVTFTALI 372

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +C  G +  A   +  + +    P ++ YN+LING+C VG ++ A +L  E++ KGL+
Sbjct: 373 DGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 432

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD VTY T+I+   +      AF +  QM + G  P    Y SL+   C  ++ S A  L
Sbjct: 433 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVL 492

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLI 643
           +   ++     D+ +  S I+   ++G VE+A    L +  K+    + P    Y++ + 
Sbjct: 493 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVESA----LSLHDKMVKAGVLPDVVTYSVLIN 548

Query: 644 GLCQDGQVKEALNI---------------FSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
           GL +  +  EA  +               +  L+ C       S + L+ G C +G ++ 
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 608

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
           A  V+   L   + L   V + L+     + +  K  ++H
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFH 648



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 15/370 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I ++ K    +     + ++R   + +    F  LI G+ K G  + AL +   MK+
Sbjct: 334 TSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ 393

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P V  YNA++N          A  + +EM      P++VT+S +I+   K+  T  
Sbjct: 394 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 453

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++  +M ++G+LP+  TY+ +I  LC   R  +A+ LF  M   G  PD   Y +L++
Sbjct: 454 AFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 513

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   V+ AL+L     K G +P + +YS LI+GL ++ R  EA     K++ E   P
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573

Query: 307 DVVLYG---------------VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               Y                 +++G    G + +A K+   M +R    D   Y+ LI 
Sbjct: 574 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 633

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G + +A S   ++ +    PN+ +   LI G+  NGMV +A ++  ++       
Sbjct: 634 GHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLA 693

Query: 412 SVGMFNALID 421
                 ALID
Sbjct: 694 DAEASKALID 703



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 20/334 (5%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D   + L E+ +  +      +  +IS Y K  D   A E   +M E    PD   Y++
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++ +   ++    A  ++  M+KL   P+  T++ LI+G  K G  E A+ + D+M + G
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAG 535

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +LP+  TY+++I+GL +  RA EA +L  K+      P    Y+AL++  C+   +   L
Sbjct: 536 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVL 594

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           ALL+ F   G +                   +EA   Y+ M +     D  +Y V+I G 
Sbjct: 595 ALLKGFCMKGLM-------------------NEADKVYQSMLDRNWNLDGSVYSVLIHGH 635

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
             AG V  A+     M + G  P++    +LI+G  + G++ +A  +  ++    SL + 
Sbjct: 636 CRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADA 695

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
                LI      G VD    + + M K G  PS
Sbjct: 696 EASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 166/594 (27%), Positives = 276/594 (46%), Gaps = 65/594 (10%)

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  ++A  +  KM+EF    + Y YN ++++  + +    A+ VY  M+     P++ T+
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L+ GL K    +  + +L EM   G+ PN +T+TI I  L +  + +EAY +  +M D
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC PD V Y  L++  C  R++D A  +    +     P   +Y  L+D     +  D 
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
              ++ +M ++   PDVV + +++  L +AG   +A   L  MR++GI+P+ + YN LI 
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G   +  LD A  L   +      P  +T+ + I    ++G    A + F KM+  G  P
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           ++   NA +  L KAG   +A  +FY + +IG  P              D  +   M++ 
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP--------------DSVTYNMMMKC 512

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           Y   G I +A K+L ++ E+G  PD+I  NSLIN   K   ++ A K+F  ++   L+P 
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            VTY TL+ GL +  + ++A  +F  M Q GC P+   + +L    C+  + +LA     
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA----- 627

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLC 646
                                            L+M FK+ D    P    Y   + GL 
Sbjct: 628 ---------------------------------LKMLFKMMDMGCVPDVFTYNTIIFGLV 654

Query: 647 QDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMDV---FLY 695
           ++GQVKEA+  F    + K +V P   +   L+ G+ K   ++ A  +   FLY
Sbjct: 655 KNGQVKEAMCFFH---QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 191/708 (26%), Positives = 315/708 (44%), Gaps = 93/708 (13%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTF 171
           DC K  E F KMK    +PD   Y  +L+  F     L ++  ++ EM K   +P++VTF
Sbjct: 310 DCAK--EVFEKMKTGRHKPDRVTYITLLD-RFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++L++ L K+G    A   LD M  +GILPN  TY  +I GL +++R D+A  LF  M+ 
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G  P    Y   ++ + K      AL      +  G  P + + +  +  L +A R  E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   +  + +  + PD V Y +M++  S+ G++ +A+KLLS+M E G  PD    N+LI 
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
                  +D+A  + + + +    P   T+  L+ G+ +NG + +A +LF  M + GC P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TLFLRLSQGGNRVH----- 459
           +   FN L D LCK  E+  A  +LF  M++G  P      T+   L + G         
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666

Query: 460 ---------DKASLQTMVEQYCTAGLIHKAYKILMQ---------------------LAE 489
                    D  +L T++     A LI  AYKI+                       LAE
Sbjct: 667 HQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726

Query: 490 SGNLPDIITYNS--LINGFCKVG---------------NINGALKLFKELQLK-GLRPDS 531
           +G + + ++++   + NG C+ G               N++GA  LF++     G++P  
Sbjct: 727 AG-IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            TY  LI GL   D  E A  +F Q+   GC P  A Y  L+    +  K    F L+  
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY-- 843

Query: 592 YLRDISGRDDESMK-----SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWL 642
             +++S  + E+        I   ++ G V++A+    ++   ++D   +P    Y   +
Sbjct: 844 --KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL---MSDRDFSPTACTYGPLI 898

Query: 643 IGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
            GL + G++ EA  +F  +++  C+     P+C     LI+G  K G  D A  +F   +
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCR-----PNCAIYNILINGFGKAGEADAACALFKRMV 953

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           K G  +RP +  Y +         +     H    +K  G + D   Y
Sbjct: 954 KEG--VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 169/705 (23%), Positives = 311/705 (44%), Gaps = 63/705 (8%)

Query: 48  FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           +R  I    R  L++++S   ++  L K    D     L E+ +  +      F + I  
Sbjct: 211 YRRMILEGFRPSLQTYSS---LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
             + G   +A E   +M +  C PDV  Y  +++     +    A  V+ +M      P+
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            VT+  L++  S +   +   +   EM + G +P+  T+TI++  LC+     EA+    
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M+D G  P+   YN L+ G  ++ R+D+AL L  + E  G  P   +Y   ID   ++ 
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
               A   + KM  + I P++V     +  L++AG+ ++A ++   +++ G+VPD+  YN
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            ++K +  +G +D+A  L  E+ +    P+      LI  + +   VD+A K+F +M++ 
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P+V  +N L+ GL K G++++A  LF  M     P              +  +  T+
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP-------------NTITFNTL 614

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
            +  C    +  A K+L ++ + G +PD+ TYN++I G  K G +  A+  F +++ K +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLV 673

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA-------------------- 567
            PD VT  TL+ G+ +    EDA++I      N C   PA                    
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN-CADQPANLFWEDLIGSILAEAGIDNA 732

Query: 568 ------------------VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
                             +   ++ +SC+    S A +L+ ++ +D+  +      +  I
Sbjct: 733 VSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI 792

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECK 665
              L+   +E A    L++        +A Y   L    + G++ E   ++  +   EC+
Sbjct: 793 GGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECE 852

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           A     + V  I GL K G +D A+D++ Y L +     P  C Y
Sbjct: 853 ANTITHNIV--ISGLVKAGNVDDALDLY-YDLMSDRDFSPTACTY 894



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 246/558 (44%), Gaps = 91/558 (16%)

Query: 93   NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
            ++ +V D   + +++  Y KVG+ ++A++   +M E  C+PDV + N+++N  ++     
Sbjct: 496  DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555

Query: 151  LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
             A  ++  M ++   P +VT++ L+ GL K+GK + AI++ + M Q+G  PN  T+  + 
Sbjct: 556  EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615

Query: 211  SGLCQINRADEAYRLFLKMKDSGCS----------------------------------P 236
              LC+ +    A ++  KM D GC                                   P
Sbjct: 616  DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP 675

Query: 237  DFVAYNALLNGFCKLRRVDEALALLRSFEKD---------------------------GF 269
            DFV    LL G  K   +++A  ++ +F  +                            F
Sbjct: 676  DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSF 735

Query: 270  VPRLGSYSCLIDG------LFRAKRYDEAYAWYRKMFEE-----KIEPDVVLYGVMIRGL 318
              RL +     DG      + R        +  R +FE+      ++P +  Y ++I GL
Sbjct: 736  SERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795

Query: 319  SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
             EA  ++ A  +   ++  G +PD   YN L+  +   G +D+   L  E+   +   NT
Sbjct: 796  LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855

Query: 379  HTFTILICGMCRNGMVDDAQKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T  I+I G+ + G VDDA  L+ + M      P+   +  LIDGL K+G L +A  LF 
Sbjct: 856  ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915

Query: 438  KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
             M + G  P                A    ++  +  AG    A  +  ++ + G  PD+
Sbjct: 916  GMLDYGCRPNC--------------AIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961

Query: 497  ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
             TY+ L++  C VG ++  L  FKEL+  GL PD V Y  +INGL +  R E+A  +F +
Sbjct: 962  KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021

Query: 557  MPQN-GCTPSPAVYKSLM 573
            M  + G TP    Y SL+
Sbjct: 1022 MKTSRGITPDLYTYNSLI 1039



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 168/322 (52%), Gaps = 2/322 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             + +LI G  +    E A + F ++K   C PDV  YN +L+   +         +Y EM
Sbjct: 787  TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML-DEMTQRGILPNKFTYTIVISGLCQINR 218
                C  N +T +++I+GL K+G  + A+ +  D M+ R   P   TY  +I GL +  R
Sbjct: 847  STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906

Query: 219  ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              EA +LF  M D GC P+   YN L+NGF K    D A AL +   K+G  P L +YS 
Sbjct: 907  LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966

Query: 279  LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR-ER 337
            L+D L    R DE   +++++ E  + PDVV Y ++I GL ++ ++++A+ L ++M+  R
Sbjct: 967  LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026

Query: 338  GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            GI PD Y YN+LI      G++++A  +  EI +    PN  TF  LI G   +G  + A
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086

Query: 398  QKLFNKMEKAGCFPSVGMFNAL 419
              ++  M   G  P+ G +  L
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 221/529 (41%), Gaps = 120/529 (22%)

Query: 117  ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL-------------- 162
            AL+   KM +  C PDV+ YN ++    +      A+  +++M KL              
Sbjct: 627  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686

Query: 163  -------------------NC---------------------LPNIVTFS--LLINGLSK 180
                               NC                     + N V+FS  L+ NG+ +
Sbjct: 687  VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746

Query: 181  SGKTEV---------------AIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYR 224
             G + +               A  + ++ T+  G+ P   TY ++I GL + +  + A  
Sbjct: 747  DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806

Query: 225  LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            +FL++K +GC PD   YN LL+ + K  ++DE   L +            +++ +I GL 
Sbjct: 807  VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866

Query: 285  RAKRYDEAYA-WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +A   D+A   +Y  M +    P    YG +I GLS++G++ +A +L   M + G  P+ 
Sbjct: 867  KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926

Query: 344  YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
              YN LI GF   G  D A +L   + K    P+  T+++L+  +C  G VD+    F +
Sbjct: 927  AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986

Query: 404  MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
            ++++G  P V  +N +I+GL K+  LE+A +LF +M+  +  T                 
Sbjct: 987  LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT----------------- 1029

Query: 464  LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
                                          PD+ TYNSLI      G +  A K++ E+Q
Sbjct: 1030 ------------------------------PDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059

Query: 524  LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              GL P+  T+  LI G     + E A+ ++  M   G +P+   Y+ L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/592 (27%), Positives = 272/592 (45%), Gaps = 57/592 (9%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY-KVGDC 114
           +R  + SF     +I  L     F +  + L +++     V  +  F+LI  YY K G  
Sbjct: 87  QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGC-VFKESLFILIMRYYGKAGLP 145

Query: 115 EKALESFGKMKEFDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            +A      M    C +P    YN VL I        +A  V+Y+M+     P + TF +
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGV 205

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++       + + A  +L +MT+ G +PN   Y ++I  L + NR +EA +L  +M   G
Sbjct: 206 VMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG 265

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALA-----LLRSFEKDGFVP--------RLGS----- 275
           C PD   +N +++G CK  R+ EA       LLR F  D  +         R+G      
Sbjct: 266 CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325

Query: 276 -------------YSCLIDGLFRAKRYDEAY-AWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
                        Y+ LI+G   + R++EA    Y+ M     EPD   + +MI GL + 
Sbjct: 326 AMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKK 385

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G +  A++ L +M ++G  P+   Y  LI GFC  G  ++A  +   +  +    NT  +
Sbjct: 386 GYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-- 439
             LI  +C++G + DA +++ +M   GC P +  FN+LI GLCK  ++E+A  L+  M  
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505

Query: 440 ------EIGKNPTL--FLRLS--QGGNRVH----------DKASLQTMVEQYCTAGLIHK 479
                  +  N  +  FLRL   Q  +++           D  +   +++  C  G   K
Sbjct: 506 EGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              ++ Q+      P I + N LIN FC+ G +N AL+  +++  +GL PD VTY +LIN
Sbjct: 566 CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           GL ++ R ++A  +F  +   G  P    Y +L++  C    F+ A  L  +
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFK 677



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/611 (27%), Positives = 270/611 (44%), Gaps = 57/611 (9%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF-TYTIVISGLCQINRADEAYRLFLKM 229
           F L++    K+G    A ++L +M         F +Y +V+  L   N    A  +F  M
Sbjct: 132 FILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDM 191

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G SP    +  ++  FC +  VD A +LLR   K G VP    Y  LI  L    R 
Sbjct: 192 LSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRV 251

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +EA     +MF    EPDV  +  +I GL +AG++ +A KL   M  R    D      L
Sbjct: 252 NEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYL 311

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSL--------------------------------PN 377
           + G C +G +D+AR++  +I   +++                                P+
Sbjct: 312 MHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD 371

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             TF I+I G+C+ G +  A +  ++M K G  P+V  +  LIDG CK G  E+A+ +  
Sbjct: 372 AFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVN 431

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
            M   K  +L            +      ++   C  G I  A ++  +++  G  PDI 
Sbjct: 432 SMS-AKGLSL------------NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIY 478

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           T+NSLI G CK   +  AL L++++ L+G+  ++VTY TLI+   R++  + A ++ G+M
Sbjct: 479 TFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM 538

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEV 616
              GC      Y  L+   C+         L  Q +  +I    +     I  F + G+V
Sbjct: 539 RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV 598

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-- 674
            +A+Q L +M  +     +  Y   + GLC+ G+ +EALN+F+ L + K I   P  V  
Sbjct: 599 NDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL-QAKGI--HPDAVTY 655

Query: 675 -KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             LI   C  G  + A  +    + NGFI  P    + +    F K+N     + +L  M
Sbjct: 656 NTLISRYCYEGLFNDACQLLFKGVSNGFI--PNEITWSILINYFVKNNSDSEQFTIL--M 711

Query: 734 KSVGYDLDACL 744
            + G+ L A +
Sbjct: 712 GNWGFWLAAII 722



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 204/407 (50%), Gaps = 20/407 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE-MVKL 162
           L+ G  ++G  ++A     K+      P+  +YN ++N       F  A  + Y+ MV  
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+  TF+++I+GL K G    A++ LDEM ++G  PN  TYTI+I G C+    +EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++   M   G S + V YN L+   CK  ++ +AL +       G  P + +++ LI G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  + +EA   YR M  E +  + V Y  +I        ++ A KL+ +MR RG   D
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LIK  C  G  ++   L  +++  +  P+ ++  ILI   CR G V+DA +   
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
            M + G  P +  +N+LI+GLCK G  ++A  LF  ++  G +P              D 
Sbjct: 607 DMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHP--------------DA 652

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
            +  T++ +YC  GL + A ++L +   +G +P+ IT++ LIN F K
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LDE+           + +LI G+ K G  E+A +    M       +   YN ++    +
Sbjct: 395 LDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCK 454

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 AL +Y EM    C P+I TF+ LI GL K+ K E A+ +  +M   G++ N  T
Sbjct: 455 DGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVT 514

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I    ++    +A +L  +M+  GC  D + YN L+   CK    ++ L L+    
Sbjct: 515 YNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMF 574

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +   P + S + LI+   R  + ++A  + R M +  + PD+V Y  +I GL + G+ +
Sbjct: 575 GEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQ 634

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L + ++ +GI PD   YN LI  +C  GL + A  L  +      +PN  T++ILI
Sbjct: 635 EALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILI 694

Query: 386 CGMCRN 391
               +N
Sbjct: 695 NYFVKN 700



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 142/297 (47%), Gaps = 4/297 (1%)

Query: 61  RSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           + F  N    ++L+    K   F+   + ++ + +  +S+ +  +  LI    K G  + 
Sbjct: 401 KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQD 460

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL+ +G+M    C+PD+Y +N+++    +      AL +Y +M+    + N VT++ LI+
Sbjct: 461 ALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              +    + A K++ EM  RG   +  TY  +I  LC+    ++   L  +M      P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
              + N L+N FC+  +V++AL  LR   + G  P + +Y+ LI+GL +  R+ EA   +
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +  + I PD V Y  +I      G   DA +LL      G +P+   ++ LI  F
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYF 697



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI    K G  EK L    +M   +  P +   N ++N   R      AL    +M++  
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+IVT++ LINGL K G+ + A+ + + +  +GI P+  TY  +IS  C     ++A 
Sbjct: 613 LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDAC 672

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           +L  K   +G  P+ + ++ L+N F K     E   +L
Sbjct: 673 QLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 185/692 (26%), Positives = 318/692 (45%), Gaps = 62/692 (8%)

Query: 29  LSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVISMLL------------- 74
           L+   V+  ++K K +P+   +FF  A  R   R  A +  V++ +L             
Sbjct: 92  LAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVI 151

Query: 75  -----------KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
                        + FD+ W T +  R G   V   +F VL+     +G  E+A + F K
Sbjct: 152 KEWILLGREFPGCDFFDMLWSTRNVCRPG-FGVFDTLFNVLVD----LGMLEEARQCFWK 206

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M +F   P V   N +L+   +     LAL+ + +MV     P++ T++++I  L++ G 
Sbjct: 207 MNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGD 266

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E A  + +EM  +G+ P+  TY  +I G  ++     A  +F +MKD+GC PD + YN+
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNS 326

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+N FCK  R+ +A   L   ++ G  P + +YS LID   +A    EA  ++  M    
Sbjct: 327 LINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++P+   Y  +I    + G + +A KL S+M++ G+  +   Y AL+ G C+ G + +A 
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L   + K     N   +T L  G  +  M++ A  +  +M K    P + ++   I GL
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGL 506

Query: 424 CKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C+  E+E +  +  + M+ G     ++                T+++ Y   G   +A  
Sbjct: 507 CRQNEIEDSMAVIREMMDCGLTANSYI--------------YTTLIDAYFKVGKTTEAVN 552

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L ++ + G    ++TY  LI+G CK+G +  A++ F  +   GL+P+ + Y  LI+GL 
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           + D  E+A  +F +M   G +P   VY SL+  + +      A SL  + +      D  
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672

Query: 603 SMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD----GQVKEALNI 657
           +  S I  F + G+V+ A   L EM  K     + P  +  I L +     G + EAL +
Sbjct: 673 AYTSLIWGFSRYGQVQLAKSLLDEMLRK----GIIPDQVLCICLLRKYYELGDINEALAL 728

Query: 658 FSVLVECKAI-----VTPPSC---VKLIHGLC 681
              +     I     +T PSC   V  +H LC
Sbjct: 729 HDDMARRGLISGTIDITVPSCLTAVTKLHKLC 760



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 235/515 (45%), Gaps = 20/515 (3%)

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C P F  ++ L N    L  ++EA        K   +P++ S + L+  L ++ +   A 
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           ++++ M    + P V  Y ++I  L+  G ++ A  L  +M+ +G+ PD   YN+LI G+
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             +G+L  A S+  E+      P+  T+  LI   C+   +  A +  + M++ G  P+V
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             ++ LID  CKAG L +AN  F  M  +G  P  F              +  ++++  C
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEF--------------TYTSLIDANC 402

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G +++A+K+  ++ ++G   +I+TY +L++G C+ G +  A +LF  L   G   +  
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
            Y +L +G  +    E A  I  +M +    P   +Y + +   CR+ +   + ++ ++ 
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAV-IRE 521

Query: 593 LRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           + D     +  + +  I+ + + G+   A+  L EM        +  Y + + GLC+ G 
Sbjct: 522 MMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGL 581

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V++A+  F  +              LI GLCK   L+ A ++F   L  G      V   
Sbjct: 582 VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTS 641

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L+   +  K      A  L  RM  +G +LD C Y
Sbjct: 642 LIDGNM--KHGNPGEALSLRNRMVEIGMELDLCAY 674



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 231/503 (45%), Gaps = 34/503 (6%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P  G +  L + L      +EA   + KM + ++ P V     ++  LS++ K   A+  
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             DM   G+ P  + YN +I      G L+ ARSL  E+  +   P+  T+  LI G  +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
            GM+  A  +F +M+ AGC P V  +N+LI+  CK   + +A    + M + G  P +  
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV-- 356

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  T+++ +C AG++ +A K  + +   G  P+  TY SLI+  CK+
Sbjct: 357 ------------VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKI 404

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++N A KL  E+Q  G+  + VTY  L++GL    R  +A  +FG + + G T +  +Y
Sbjct: 405 GDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIY 464

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM--KSIEEFLQKGEVENAIQGLLEM- 626
            SL     + +    A  + L+ +   + + D  +    I    ++ E+E+++  + EM 
Sbjct: 465 TSLFHGYIKAKMMEKAMDI-LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523

Query: 627 --DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                 N +    YT  +    + G+  EA+N+   + +    +T  +   LI GLCK G
Sbjct: 524 DCGLTANSY---IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +  A+  F +  +NG  L+P +  Y        K++    A +L   M   G   D  +
Sbjct: 581 LVQQAVRYFDHMTRNG--LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638

Query: 745 YPKTKSLLPGPWNTREMENMSPG 767
           Y    SL+ G      M++ +PG
Sbjct: 639 Y---TSLIDG-----NMKHGNPG 653


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 248/500 (49%), Gaps = 35/500 (7%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLF 149
           SG  +VV+  +  LI GY + G    AL     M      PD Y YN VL  + F KQ +
Sbjct: 182 SGAANVVT--YTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQ-W 235

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  +  EM++ NC PN VTF+  I    ++G  + A+++L++M + G +P+   Y+ +
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           ++G  +  R D+A +L   M    C P+ V YNA L G C   R DE   L+    +   
Sbjct: 296 VNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   ++S LI+ L + +  + A     +M +    PDVV Y  +I   SE     DA+K
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL+ M  +   PDT  +NA++K  C       A  L  ++ K D   N  TF ILI  +C
Sbjct: 413 LLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLC 469

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-----IGKN 444
           +NG V DA ++F  M K  C P +  +++LI+G  + G  + A  LF  M         N
Sbjct: 470 QNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYN 529

Query: 445 PTL-----FLRLSQGGNRVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            TL       R    G  + D         + +   ++   C  GL+++A ++  Q+ + 
Sbjct: 530 ATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKY 589

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  PDI TYN+LING+ + G ++ ALK    +  +   PD+++Y +++ GL R +R +DA
Sbjct: 590 GITPDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDA 646

Query: 551 FRIFGQMPQNGCTPSPAVYK 570
            ++  +M +  CTP+   +K
Sbjct: 647 EKLVTEMLRKNCTPNEVTFK 666



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 230/521 (44%), Gaps = 66/521 (12%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   T  I+I  LC   R  +A R+   +K SG + D V++N L+ G+C+          
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCR---------- 165

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                 DG              L+ A+R  EA              +VV Y  +I G   
Sbjct: 166 ------DG-------------SLWDAERVLEAA-------RASGAANVVTYTALIDGYCR 199

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           +G++ DA++L++ M    + PDTY YN ++KG C     ++A  L  E+ + +  PN  T
Sbjct: 200 SGRLTDALRLIASM---PVAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVT 256

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F   I   C+NG++D A +L  +M K GC P V +++ L++G  + G ++ A  L   M 
Sbjct: 257 FATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML 316

Query: 441 IGKNPTLFL----------RLSQGGNRVHD---------KASLQTMVEQYCTAGLIHKAY 481
              N   +           R  + G  + +          A+  T++   C   L   A 
Sbjct: 317 CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAI 376

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++L Q+ + G +PD+++YN++I+ F +    + ALKL   +  K   PD++++  ++  L
Sbjct: 377 EVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCL 433

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            R +R  DA  +  +M +  C  +   +  L+   C+  +   A  ++    +     D 
Sbjct: 434 CRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDI 493

Query: 602 ESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
            +  S I  F ++G  + A      M  + + F    Y   L GLC   +  +A  + + 
Sbjct: 494 VTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFS---YNATLKGLCMAARWDDAGELIAD 550

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           +V    +    +   LI+ LC++G ++ A++V+    K G 
Sbjct: 551 MVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGI 591


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 241/503 (47%), Gaps = 13/503 (2%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F   P++Y  N ++N     Q    A +V  +++KL   PNI TF+ LI GL   G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K    + + D+M   G  PN  TY  +I+GLC++     A RL   M+   C PD V Y 
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           ++++  CK R+V +A  L       G  P + +Y+ LI  L     +    A   +M   
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           KI P+VV++  ++  L + GKV +A  ++  M +RG+ P+   YNAL+ G C    +D+A
Sbjct: 264 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 323

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +  +   P+  +++ LI G C+   ++ A  LF +M +    P+   ++ L+ G
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  G L+ A  LF++M           +++G  ++ D  S   +++  C    + +A  
Sbjct: 384 LCHVGRLQDAIALFHEM-----------VTRG--QIPDFVSYCILLDYLCKNRRLDEAIA 430

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  S   PDI  Y  +I+G C+ G +  A  LF  L  KGL P+  TY  +INGL 
Sbjct: 431 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 490

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +     +A ++FG+M + G +P+   Y  +     R  +      L  + L      D  
Sbjct: 491 QQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVS 550

Query: 603 SMKSIEEFLQKGEVENAIQGLLE 625
           +   + E L    ++ +++ +L 
Sbjct: 551 TSTVLVEMLSDDGLDQSVKQILS 573



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 220/459 (47%), Gaps = 13/459 (2%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +     A     K+ +   QP++  +N ++     +      L ++ +M+  
Sbjct: 99  ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+VT+  LINGL K G T  AI++L  M Q    P+   YT +I  LC+  +  +A
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF +M   G SP    YN+L++  C L       ALL        +P +  +S ++D 
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA+     M +  +EP+VV Y  ++ G     ++ +A+K+   M  +G  PD
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ LI G+C +  +++A  L  E+ +++ +PNT T++ L+ G+C  G + DA  LF+
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P    +  L+D LCK   L++A  L   +E             G N   D  
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE-------------GSNMDPDIQ 445

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               +++  C AG +  A  +   L+  G  P++ TY  +ING C+ G +  A KLF E+
Sbjct: 446 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 505

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           + KG  P+  TY  +  G  R +      ++  +M   G
Sbjct: 506 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 245/530 (46%), Gaps = 22/530 (4%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N  D+A   F +M      P    +  LL    K++     L+L    +  G  P + + 
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+     +R   A++   K+ +   +P++  +  +IRGL   GK+ + + L   M  
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  P+   Y  LI G C +G    A  L   + + +  P+   +T +I  +C++  V  
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQ 453
           A  LF++M   G  PS+  +N+LI  LC   E +    L  +M   +I  N  +F     
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF----- 272

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                       T+V+  C  G + +A+ ++  + + G  P+++TYN+L++G C    ++
Sbjct: 273 -----------STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 321

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+K+F  +  KG  PD V+Y TLING  ++ R E A  +F +M +    P+   Y +LM
Sbjct: 322 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 381

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLND 632
              C   +   A +L+ + +      D  S   + ++L K   ++ AI  L  ++    D
Sbjct: 382 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 441

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  YTI + G+C+ G+++ A ++FS L          +   +I+GLC++G L  A  +
Sbjct: 442 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 501

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           F    + G+   P  C Y L +  F ++N+ +    LL  M + G+  D 
Sbjct: 502 FGEMKRKGY--SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 549



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+    + ++A++ F  M      PDV  Y+ ++N   + Q    A+ ++ EM +  
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN VT+S L++GL   G+ + AI +  EM  RG +P+  +Y I++  LC+  R DEA 
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 429

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   ++ S   PD   Y  +++G C+   ++ A  L  +    G  P + +Y+ +I+GL
Sbjct: 430 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     EA   + +M  +   P+   Y ++ RG     +    ++LL +M  RG   D 
Sbjct: 490 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 549

Query: 344 YCYNALIKGFCDLGLLDQA 362
                L++   D G LDQ+
Sbjct: 550 STSTVLVEMLSDDG-LDQS 567



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 74/169 (43%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F     R ++  F S   ++  L K    D     L  +   N+     ++ ++
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I G  + G+ E A + F  +      P+V+ Y  ++N   ++ L   A  ++ EM +   
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            PN  T++L+  G  ++ +T   I++L EM  RG   +  T T+++  L
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 313/658 (47%), Gaps = 58/658 (8%)

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E  G  +EF   P V+  + +L +   K L   AL V+  M K   +P++ + + L+N L
Sbjct: 144 ELVGVYREFAFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNL 201

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K+G+T  A  +  +M + GI+P+ F  +I+++  C+  + DEA     KM++ G  P+ 
Sbjct: 202 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 261

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y++L+NG+  L  V+ A  +L+   + G    + +Y+ LI G  +  + DEA    R 
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321

Query: 299 MFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           M EE  + PD   YGV+I G    GK+ DA++LL +M   G+  + +  N+LI G+C  G
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 381

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            + +A  +   +   +  P+++++  L+ G CR G   +A  L +KM + G  P+V  +N
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--FLRLS--QGGNRV------- 458
            L+ GLC+ G  + A  +++ M        E+G +  L    ++   +G + +       
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501

Query: 459 ---HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                + +  TM+   C  G + +A +I  ++ + G  PD ITY +LI+G+CK  N+  A
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 561

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            K+   ++ + + P    Y +LI+GL +  R  +   +  +M   G TP+   Y +L+  
Sbjct: 562 FKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDG 621

Query: 576 SCRRRKFSLAFSLWLQYLRD------------IS-----GRDDESMKSIEEFLQKGEVEN 618
            C+      AFS + +   +            +S     GR DE+   +++ +  G   +
Sbjct: 622 WCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681

Query: 619 ------------AIQGLLE-MDFKLNDFQLAP---YTIWLIGLCQDGQVKEALNIFSVLV 662
                       AIQ + + +D     F L     Y I + GLC+ G+V +A   FS+L 
Sbjct: 682 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
               +    +   LIHG    G +D A  +    L+ G +      N L+  L  S++
Sbjct: 742 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 245/505 (48%), Gaps = 45/505 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY + G   +A     KM +   +P V  YN +L    R   F  AL +++ M+
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P+ V +S L++GL K    E A  +  ++  RG   ++ T+  +ISGLC++ +  
Sbjct: 465 KXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F KMKD GCSPD + Y  L++G+CK   V +A  +  + E++   P +  Y+ LI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLI 584

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLF+++R  E      +M    + P++V YG +I G  + G +  A     +M E G+ 
Sbjct: 585 SGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-----------------------DS--- 374
            +    + ++ G   LG +D+A  L  ++                          DS   
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 704

Query: 375 ------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
                 LPN   + I I G+C+ G VDDA++ F+ +   G  P    +  LI G   AG 
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +++A  L  +M           L +G   V +  +   ++   C +  + +A ++  +L 
Sbjct: 765 VDEAFRLRDEM-----------LRRG--LVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P+++TYN+LI+G+CK+GN++ A KL  ++  +G+ P  VTY  LINGL +    E
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLM 573
            + ++  QM + G       Y +L+
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLV 896



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 174/672 (25%), Positives = 298/672 (44%), Gaps = 64/672 (9%)

Query: 100 VFFVLISGYYK---VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            + +LI GY K   + + EK L   G  +E    PD   Y  +++   R      A+ + 
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM++L    N+   + LING  K G+   A  ++  M    + P+ ++Y  ++ G C+ 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               EA+ L  KM   G  P  + YN LL G C++   D+AL +     K G  P    Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGY 475

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S L+DGLF+ + ++ A   ++ +         + +  MI GL + GK+ +A ++   M++
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PD   Y  LI G+C    + QA  ++  + +    P+   +  LI G+ ++  + +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVE 595

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQ 453
              L  +M   G  P++  + ALIDG CK G L+KA   +++M    +  N  +   +  
Sbjct: 596 XTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655

Query: 454 GGNRVH--DKASL--QTMVEQ--------YCTAGLIHKAY-KILMQLAESGN---LPDII 497
           G  R+   D+A+L  Q MV+         +  + + + A  KI   L ES     LP+ I
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 715

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            YN  I G CK G ++ A + F  L LKG  PD+ TY TLI+G       ++AFR+  +M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            + G  P+   Y +L+   C+                  S   D + +   +  QKG   
Sbjct: 776 LRRGLVPNIVTYNALINGLCK------------------SENVDRAQRLFHKLHQKGLFP 817

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           N +                 Y   + G C+ G +  A  +   ++E     +  +   LI
Sbjct: 818 NVVT----------------YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           +GLCK G ++ +M +    +K G      V + L+      +   K   Y+ + + +++ 
Sbjct: 862 NGLCKHGDIERSMKLLNQMIKAG------VDSKLIEYCTLVQGGFKTSNYNEMSKPEALK 915

Query: 738 YDLDACLYPKTK 749
            +++  L PK K
Sbjct: 916 QNMNCFLLPKFK 927



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 172/371 (46%), Gaps = 32/371 (8%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D+++    S     +  LI GY K  +  +A +  G M+     P + +YN++++  
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F+ +  +    +  EM      PNIVT+  LI+G  K G  + A     EMT+ G+  N 
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF------------------------- 238
              + ++SGL ++ R DEA  L  KM D G  PD                          
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707

Query: 239 -------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
                  + YN  + G CK  +VD+A          GFVP   +Y  LI G   A   DE
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+    +M    + P++V Y  +I GL ++  V  A +L   + ++G+ P+   YN LI 
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C +G +D A  L+ ++ +    P+  T++ LI G+C++G ++ + KL N+M KAG   
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887

Query: 412 SVGMFNALIDG 422
            +  +  L+ G
Sbjct: 888 KLIEYCTLVQG 898



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 7/275 (2%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            F  Y++  +   S N+ + S     ++SG Y++G  ++A     KM +    PD   + 
Sbjct: 631 AFSSYFEMTENGLSANIIICS----TMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HE 683

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             L    R            E  K   LPN + +++ I GL K+GK + A +    ++ +
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G +P+ FTY  +I G       DEA+RL  +M   G  P+ V YNAL+NG CK   VD A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L     + G  P + +Y+ LIDG  +    D A+    KM EE I P VV Y  +I G
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           L + G ++ +MKLL+ M + G+      Y  L++G
Sbjct: 864 LCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 249/507 (49%), Gaps = 21/507 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F   P++Y  N ++N     Q    A +V  +++KL   PNI TF+ LI GL   G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K    + + D+M   G  PN  TY  +I+GLC++     A RL   M+   C PD V Y 
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           ++++  CK R+V +A  L       G  P + +Y+ LI  L     +    A   +M   
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           KI P+VV++  ++  L + GKV +A  ++  M +RG+ P+   YNAL+ G C    +D+A
Sbjct: 273 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 332

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +  +   P+  +++ LI G C+   ++ A  LF +M +    P+   ++ L+ G
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  G L+ A  LF++M           +++G  ++ D  S   +++  C    + +A  
Sbjct: 393 LCHVGRLQDAIALFHEM-----------VTRG--QIPDFVSYCILLDYLCKNRRLDEAIA 439

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  S   PDI  Y  +I+G C+ G +  A  LF  L  KGL P+  TY  +INGL 
Sbjct: 440 LLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLC 499

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR--- 599
           +     +A ++FG+M + G +P+   Y +L+T    R   +L     +Q L+++  R   
Sbjct: 500 QQGLLAEASKLFGEMKRKGYSPNGCTY-NLITRGFLRNNETLR---GIQLLQEMLARGFS 555

Query: 600 -DDESMKSIEEFLQKGEVENAIQGLLE 625
            D  +   + E L    ++ +++ +L 
Sbjct: 556 ADVSTSTVLVEMLSDDGLDQSVKQILS 582



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 220/459 (47%), Gaps = 13/459 (2%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +     A     K+ +   QP++  +N ++     +      L ++ +M+  
Sbjct: 108 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+VT+  LINGL K G T  AI++L  M Q    P+   YT +I  LC+  +  +A
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF +M   G SP    YN+L++  C L       ALL        +P +  +S ++D 
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA+     M +  +EP+VV Y  ++ G     ++ +A+K+   M  +G  PD
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ LI G+C +  +++A  L  E+ +++ +PNT T++ L+ G+C  G + DA  LF+
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P    +  L+D LCK   L++A  L   +E             G N   D  
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE-------------GSNMDPDIQ 454

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               +++  C AG +  A  +   L+  G  P++ TY  +ING C+ G +  A KLF E+
Sbjct: 455 IYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEM 514

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           + KG  P+  TY  +  G  R +      ++  +M   G
Sbjct: 515 KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 245/530 (46%), Gaps = 22/530 (4%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N  D+A   F +M      P    +  LL    K++     L+L    +  G  P + + 
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+     +R   A++   K+ +   +P++  +  +IRGL   GK+ + + L   M  
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  P+   Y  LI G C +G    A  L   + + +  P+   +T +I  +C++  V  
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQ 453
           A  LF++M   G  PS+  +N+LI  LC   E +    L  +M   +I  N  +F     
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF----- 281

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                       T+V+  C  G + +A+ ++  + + G  P+++TYN+L++G C    ++
Sbjct: 282 -----------STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD 330

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+K+F  +  KG  PD V+Y TLING  ++ R E A  +F +M +    P+   Y +LM
Sbjct: 331 EAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLM 390

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLND 632
              C   +   A +L+ + +      D  S   + ++L K   ++ AI  L  ++    D
Sbjct: 391 HGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMD 450

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  YTI + G+C+ G+++ A ++FS L          +   +I+GLC++G L  A  +
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKL 510

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           F    + G+   P  C Y L +  F ++N+ +    LL  M + G+  D 
Sbjct: 511 FGEMKRKGY--SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 558



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+    + ++A++ F  M      PDV  Y+ ++N   + Q    A+ ++ EM +  
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN VT+S L++GL   G+ + AI +  EM  RG +P+  +Y I++  LC+  R DEA 
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 438

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   ++ S   PD   Y  +++G C+   ++ A  L  +    G  P + +Y+ +I+GL
Sbjct: 439 ALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     EA   + +M  +   P+   Y ++ RG     +    ++LL +M  RG   D 
Sbjct: 499 CQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 558

Query: 344 YCYNALIKGFCDLGLLDQA 362
                L++   D G LDQ+
Sbjct: 559 STSTVLVEMLSDDG-LDQS 576



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 74/169 (43%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F     R ++  F S   ++  L K    D     L  +   N+     ++ ++
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I G  + G+ E A + F  +      P+V+ Y  ++N   ++ L   A  ++ EM +   
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            PN  T++L+  G  ++ +T   I++L EM  RG   +  T T+++  L
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 277/586 (47%), Gaps = 41/586 (6%)

Query: 23  EPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-----------LRSFASNS---- 67
           +PL+PF+  T +    + T++P       +   KR R            +S A+++    
Sbjct: 15  KPLIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKH 74

Query: 68  ------AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
                  +I  L      D     L +++        D+F  +IS Y +VG  E+A+E F
Sbjct: 75  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++KEF C P V IYN VL+    +    +   VY +M +    PN+ T+++L+  L K+
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            K + A K+L EM+ +G  P+  +YT VIS +C++    E   L  + +     P    Y
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVY 249

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NAL+NG CK      A  L+R   + G  P + SYS LI+ L  + + + A+++  +M +
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLD 360
               P++     +++G    G   DA+ L + M R  G+ P+   YN L++GFC  G + 
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A S+   + +    PN  T+  LI G  + G +D A  ++NKM  +GC P+V ++  ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           + LC+  + ++A  L             + +    N      +    ++  C AG +  A
Sbjct: 430 EALCRHSKFKEAESL-------------IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476

Query: 481 YKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            K+  Q+ +    P +I+TYN L++G  K   I  A  L +E+ ++G+   S TY TL++
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G         A ++ G+M  +G +P       ++   C++ K   A
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 256/505 (50%), Gaps = 25/505 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           K++ F C  D++I  +V+++  +  L   A+ ++Y + +  C P++  ++ +++ L    
Sbjct: 103 KLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           + ++   +  +M + G  PN FTY +++  LC+ N+ D A +L ++M + GC PD V+Y 
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++  C++  V E   L   FE     P +  Y+ LI+GL +   Y  A+   R+M E+
Sbjct: 221 TVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEK 275

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I P+V+ Y  +I  L  +G+++ A   L+ M +RG  P+ Y  ++L+KG    G    A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335

Query: 363 RSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
             L  ++ +   L PN   +  L+ G C +G +  A  +F+ ME+ GC P++  + +LI+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G  K G L+ A  ++ KM   G  P + +                 MVE  C      +A
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVV--------------YTNMVEALCRHSKFKEA 441

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLIN 539
             ++  +++    P + T+N+ I G C  G ++ A K+F+++ Q     P+ VTY  L++
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL + +R E+A+ +  ++   G   S + Y +L+  SC      +A  L  + + D    
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 600 DDESMKS-IEEFLQKGEVENAIQGL 623
           D+ +M   I  + ++G+ E A Q L
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQML 586



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 245/561 (43%), Gaps = 71/561 (12%)

Query: 151 LALAVYYEMVKLNCLPNI-VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
           LAL  +  +   N   +  +TF ++I  L+  G+ +    +L +M  +G   ++  +  V
Sbjct: 58  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           IS   Q+  A+ A  +F ++K+ GC P    YN +L                        
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVL------------------------ 153

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
                      D L    R    Y  YR M  +  EP+V  Y V+++ L +  KV  A K
Sbjct: 154 -----------DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKK 202

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL +M  +G  PD   Y  +I   C++GL+ + R L          P    +  LI G+C
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLC 257

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLF 448
           +      A +L  +M + G  P+V  ++ LI+ LC +G++E A + L   ++ G +P ++
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFC 507
                         +L ++V+     G    A  +  Q+     L P+++ YN+L+ GFC
Sbjct: 318 --------------TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             GNI  A+ +F  ++  G  P+  TYG+LING  +    + A  I+ +M  +GC P+  
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD--ESMKSIEEFLQKGEVENAIQGLLE 625
           VY +++   CR  KF  A SL      +I  +++   S+ +   F+ KG  +       E
Sbjct: 424 VYTNMVEALCRHSKFKEAESLI-----EIMSKENCAPSVPTFNAFI-KGLCDAGRLDWAE 477

Query: 626 MDFKLNDFQ------LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
             F+  + Q      +  Y   L GL +  +++EA  +   +       +  +   L+HG
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537

Query: 680 LCKRGYLDLAMDVFLYTLKNG 700
            C  G   +A+ +    + +G
Sbjct: 538 SCNAGLPGIALQLVGKMMVDG 558



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 180/365 (49%), Gaps = 12/365 (3%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDE-LRSG---NVSVVSDVFFVLISGYYKVGDCEKALES 120
           S S +I++L      +L +  L + L+ G   N+  +S     L+ G +  G    AL+ 
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS----LVKGCFLRGTTFDALDL 338

Query: 121 FGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
           + +M + F  QP+V  YN ++         + A++V+  M ++ C PNI T+  LING +
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G  + A+ + ++M   G  PN   YT ++  LC+ ++  EA  L   M    C+P   
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVP-RLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            +NA + G C   R+D A  + R  E+    P  + +Y+ L+DGL +A R +EAY   R+
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           +F   +E     Y  ++ G   AG    A++L+  M   G  PD    N +I  +C  G 
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578

Query: 359 LDQARSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
            ++A  +   V   +R   P+  ++T +I G+CR+   +D   L  +M  AG  PS+  +
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638

Query: 417 NALID 421
           + LI+
Sbjct: 639 SVLIN 643



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 215/510 (42%), Gaps = 63/510 (12%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           +VD    LL+  +  GF      +  +I    +    + A   + ++ E   +P V +Y 
Sbjct: 91  QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++  L    +++    +  DM+  G  P+ + YN L+K  C    +D A+ L VE+  +
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+  ++T +I  MC  G+V + ++L  + E     P V ++NALI+GLCK  + + A
Sbjct: 211 GCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGA 265

Query: 433 NLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             L  +M E G +P +               S  T++   C +G I  A+  L Q+ + G
Sbjct: 266 FELMREMVEKGISPNVI--------------SYSTLINVLCNSGQIELAFSFLTQMLKRG 311

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDA 550
             P+I T +SL+ G    G    AL L+ ++ +  GL+P+ V Y TL+ G         A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +F  M + GC+P+   Y SL+    +R     A  +W                   + 
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW------------------NKM 413

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L  G   N +                 YT  +  LC+  + KEA ++  ++ +     + 
Sbjct: 414 LTSGCCPNVV----------------VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYH 728
           P+    I GLC  G LD A  VF   ++      P +  Y  LL  L  +K N+   AY 
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVF-RQMEQQHRCPPNIVTYNELLDGL--AKANRIEEAYG 514

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
           L   +   G +  +  Y    +LL G  N 
Sbjct: 515 LTREIFMRGVEWSSSTY---NTLLHGSCNA 541



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 161/377 (42%), Gaps = 45/377 (11%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRK-RLRSFASNSAVISMLLKP 76
           +E  + P    +S +T+ +V+  +   ++ F F     KR      +  +S V    L+ 
Sbjct: 273 VEKGISP--NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRG 330

Query: 77  NGFDLY--WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
             FD    W  +  +R   +      +  L+ G+   G+  KA+  F  M+E  C P++ 
Sbjct: 331 TTFDALDLWNQM--IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y +++N   ++     A+ ++ +M+   C PN+V ++ ++  L +  K + A  +++ M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRR 253
           ++    P+  T+   I GLC   R D A ++F +M+    C P+ V YN LL+G  K  R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDG-----------------LFRAKRYDE----- 291
           ++EA  L R     G      +Y+ L+ G                 +   K  DE     
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568

Query: 292 ---AYAWYRK------MFE------EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
              AY    K      M +       K  PDV+ Y  +I GL  +   +D + LL  M  
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMIS 628

Query: 337 RGIVPDTYCYNALIKGF 353
            GIVP    ++ LI  F
Sbjct: 629 AGIVPSIATWSVLINCF 645


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV F+ L++ + K  K +V I +  +M   GI  + +T+ IVI+
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C   +   A  +  KM   G  PD V   +L+NGFC+  RV +A++L+    + G+ P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +ID L + KR ++A+ +++++  + I P+VV Y  ++ GL  + +  DA +LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM ++ I P+   Y+AL+  F   G + +A+ L  E+ +    P+  T++ LI G+C +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A ++F+ M   GC   V  +N LI+G CKA  +E    LF +M            
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM------------ 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V +  +  T+++ +  AG + KA +   Q+   G  PDI TYN L+ G C  G 
Sbjct: 357 SQRG-LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL +F+++Q + +  D VTY T+I G+ +  + E+A+ +F  +   G  P    Y +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 572 LMTWSCRR 579
           +M+  C +
Sbjct: 476 MMSGLCTK 483



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 15/446 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++ F  M +    P +  +N +L+   + + + + +++  +M  L    ++ TF+++IN
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                 +  +A+ +L +M + G  P++ T   +++G C+ NR  +A  L  KM + G  P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D VAYNA+++  CK +RV++A    +  E+ G  P + +Y+ L++GL  + R+ +A    
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M ++KI P+V+ Y  ++    + GKV +A +L  +M    I PD   Y++LI G C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D+A  +   +  +  L +  ++  LI G C+   V+D  KLF +M + G   +   +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 417 NALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N LI G  +AG+++KA   F +M+  G +P ++              +   ++   C  G
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW--------------TYNILLGGLCDNG 414

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + KA  I   + +     DI+TY ++I G CK G +  A  LF  L LKGL+PD VTY 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG 561
           T+++GL       +   ++ +M Q G
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 215/433 (49%), Gaps = 13/433 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    KM+    + D+Y +N V+N         LAL++  +M+
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+ VT   L+NG  +  +   A+ ++D+M + G  P+   Y  +I  LC+  R +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+  F +++  G  P+ V Y AL+NG C   R  +A  LL    K    P + +YS L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  +  EA   + +M    I+PD+V Y  +I GL    ++ +A ++   M  +G +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D   YN LI GFC    ++    L  E+ +R  + NT T+  LI G  + G VD AQ+ 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F++M+  G  P +  +N L+ GLC  GELEKA ++F  M             Q      D
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-------------QKREMDLD 434

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++   C  G + +A+ +   L+  G  PDI+TY ++++G C  G ++    L+ 
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494

Query: 521 ELQLKGLRPDSVT 533
           +++ +GL  +  T
Sbjct: 495 KMKQEGLMKNDCT 507



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 215/500 (43%), Gaps = 82/500 (16%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  +M +    P+   +  ++S + ++ + D    L  KM+  G   D   +N ++N
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC   +V  AL++L    K G+ P   +   L++G  R  R  +A +   KM E   +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  +I  L +  +V DA     ++  +GI P+   Y AL+ G C+      A  L 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ K+   PN  T++ L+    +NG V +A++LF +M +    P +  +++LI+GLC  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC-- 306

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                                          +HD+               I +A ++   
Sbjct: 307 -------------------------------LHDR---------------IDEANQMFDL 320

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G L D+++YN+LINGFCK   +   +KLF+E+  +GL  ++VTY TLI G  +   
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            + A   F QM   G +P    Y  L+   C                             
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLC----------------------------- 411

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                  GE+E A+    +M  +  D  +  YT  + G+C+ G+V+EA ++F  L     
Sbjct: 412 -----DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 667 IVTPPSCVKLIHGLCKRGYL 686
                +   ++ GLC +G L
Sbjct: 467 KPDIVTYTTMMSGLCTKGLL 486



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 170/359 (47%), Gaps = 10/359 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    +  +    E+    +      +  L++G         A      M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y+A+L+   +    L A  ++ EMV+++  P+IVT+S LINGL    + + 
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M D M  +G L +  +Y  +I+G C+  R ++  +LF +M   G   + V YN L+ 
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF +   VD+A       +  G  P + +Y+ L+ GL      ++A   +  M + +++ 
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  +IRG+ + GKV++A  L   +  +G+ PD   Y  ++ G C  GLL +  +L 
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
            ++ +   + N  T +        +G +  + +L  KM   G  PS  +   +  G+CK
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS--LLKDIKSGVCK 542



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 56/360 (15%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
           R+  ++DA  LF+ M K+  FPS+  FN L+  + K  + +    L  KME+ G    L+
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 449 ----------------LRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
                           L LS  G  +      D+ ++ ++V  +C    +  A  ++ ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PDI+ YN++I+  CK   +N A   FKE++ KG+RP+ VTY  L+NGL    R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            DA R+   M +   TP+   Y +L+                                  
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALL---------------------------------- 267

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + F++ G+V  A +   EM     D  +  Y+  + GLC   ++ EA  +F ++V    +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               S   LI+G CK   ++  M +F    + G +      N L++    + D  K   +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 281/573 (49%), Gaps = 42/573 (7%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E   +PD   Y+ VL           AL + + MVK +  C PN+V+++ +I+G  +
Sbjct: 180 RMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFR 239

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  +  EM Q+G++P+  TY+  I  LC+    D+A  +  +M  +G  PD V 
Sbjct: 240 EGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVT 299

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN +++G+  L +  E   + R   + G +P + + +  +  L +  +  EA  ++  M 
Sbjct: 300 YNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMA 359

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  +PD+V Y V++ G +  G V D + L + M   GIV D   YN LI  +   G++D
Sbjct: 360 AKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMD 419

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  ++ +R  +P+  T+  +I    R G + DA   FN+M   G  P   ++N+LI
Sbjct: 420 EAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLI 479

Query: 421 DGLCKAGELEKANLLFYKM---EIGKNPTLFLR-----LSQGGNRVH------------- 459
            G C  G L KA  L  +M    I +  T+F       L + G  V              
Sbjct: 480 QGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGE 539

Query: 460 --DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  ++++ Y   G + KA+ +L  +   G  PD++TY++L++G+C+ G I+  L 
Sbjct: 540 RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLI 599

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+E+  KG++P ++TYG +++GL    R   A ++  +M ++G T   +    ++   C
Sbjct: 600 LFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 578 RRRKFSLAFSLW-------LQYLRDISGRDDESMKSIEEFLQKGEVENAIQ--GLLEMDF 628
           R      A +L+       +++   I     ++M  + +  +  E+ ++I   GL+    
Sbjct: 660 RNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVP--- 716

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  + Y + +  L ++G V+EA N+FS++
Sbjct: 717 -----NASTYGVMITNLLKEGSVEEADNMFSLM 744



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 266/589 (45%), Gaps = 60/589 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK- 189
           P V  YN +++   R     +  A++   +K     +++  ++L+  L  + +++ A+  
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNG 247
           +L  M + G+ P+  +Y+ V+  LC+ +R+  A  L   M  K  GCSP+ V+YN +++G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           F +   V +A  L     + G VP + +YS  ID L +A+  D+A    R+M     EPD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  MI G S  G+ K+   +  +M  RG++PD +  N+ +   C  G   +A     
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   P+  T+++L+ G    G V D   LFN ME  G      ++N LID   K G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 428 ELEKANLLFYKM-EIGKNPTLFL------------RLSQGGNRVH---------DKASLQ 465
            +++A L+F +M E G  P  +             RL+   ++ +         D     
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESG-NLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
           ++++ +C  G + KA +++ ++   G   P+ + +NS+IN  CK G +  A  +F  +  
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G RPD +T+ +LI+G   V + E AF +   M   G  P    Y +L+   CR      
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR------ 590

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                       +GR D+ +    E L KG     I                 Y I L G
Sbjct: 591 ------------NGRIDDGLILFREMLSKGVKPTTIT----------------YGIILHG 622

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           L  DG+   A  +   ++E    +   +C  ++ GLC+    D A+ +F
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALF 671



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 241/566 (42%), Gaps = 23/566 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S+ I  L K    D     L ++ S         +  +I GY  +G  ++    F +M  
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD++  N+ ++   +      A   +  M      P++VT+S+L++G +  G    
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD 385

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            + + + M   GI+ +   Y I+I    +    DEA  +F +M++ G  PD   Y  ++ 
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-E 305
            F ++ R+ +A+         G  P    Y+ LI G        +A     +M    I  
Sbjct: 446 AFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPR 505

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+ V +  +I  L + G+V +A  +   +   G  PD   +N+LI G+  +G +++A  +
Sbjct: 506 PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGV 565

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+  T++ L+ G CRNG +DD   LF +M   G  P+   +  ++ GL  
Sbjct: 566 LDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFN 625

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G    A  + ++M I    T+            D ++   ++   C      +A  +  
Sbjct: 626 DGRTVGAKKMCHEM-IESGTTM------------DISTCGIILGGLCRNNCDDEAIALFK 672

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +L       +I   N++I+   KV     A +LF  +   GL P++ TYG +I  L +  
Sbjct: 673 KLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEG 732

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD---DE 602
             E+A  +F  M ++GC PS  +  +++     + + S A +    YL  + G+    + 
Sbjct: 733 SVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGN----YLSKVDGKTISLEA 788

Query: 603 SMKS--IEEFLQKGEVENAIQGLLEM 626
           S  S  +  F +KG+    I+ L  M
Sbjct: 789 STASLMLSLFSRKGKYREQIKSLPAM 814


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 201/707 (28%), Positives = 313/707 (44%), Gaps = 127/707 (17%)

Query: 57  RKRLRSFASNSAVISMLLKPNGF----DLYW--QTLDELRSGNVSVVSDVFFVLISGYYK 110
           R R  S+  N      LL   GF     L W  + ++ + +   +    +F  L+  Y  
Sbjct: 296 RMRCNSYIPNVVTYRTLL--TGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCN 353

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQL-----FLLALAVYYEMVKLNC 164
             D   A + F +M    C P   +YN  + +I  R++L       LA  VY EM+  +C
Sbjct: 354 AEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASC 413

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           + N +  +     L   GK E A +++ EM ++G +P+  TYT VI+ LCQ  R D+A+ 
Sbjct: 414 VLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFL 473

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA-------------------LALLRSFE 265
           LF +MK  G +PD   Y  L++ FCK   +++A                    ALL ++ 
Sbjct: 474 LFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYL 533

Query: 266 K----------------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM---------- 299
           K                D   P   +YS LIDGL +A    +A   Y K+          
Sbjct: 534 KSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESD 593

Query: 300 --FEEK----IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             FE K    I P+VV YG ++ GL +A KV DA  LL  M   G  P+   Y+AL+ GF
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +G +D A+ + + + K   LP+ HT+T LI  M ++G +D A K+ ++M K  C P+V
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNV 713

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             + A++DGLCK GE EKA  L   ME                                 
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSLME--------------------------------- 740

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
                          + G  P+++TY +LI+G  K G ++  L+LF +++ KG  P+ VT
Sbjct: 741 ---------------KKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVT 785

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LIN        +DA  +  +M Q   T  P   K L  +    + FS  F   L  L
Sbjct: 786 YRILINHCCAAGLLDDAHLLLDEMKQ---THWP---KYLQGYRTTVQGFSKRFLASLGLL 839

Query: 594 RDISGRDDESMKS-----IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGL 645
            ++   D   +       I+ F + G +E A++    ++E+   LN      +T  +  L
Sbjct: 840 EEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQAL 899

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           C   QV+EA+ ++S +     +    + V L+ GL +R   + A+ +
Sbjct: 900 CLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 171/694 (24%), Positives = 300/694 (43%), Gaps = 83/694 (11%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT-- 85
           FL+ + V +V+   ++P++  RFF+WA   +R   +    A    L +  GF+   +T  
Sbjct: 98  FLTDSVVVAVLGAVRSPELCVRFFLWA---ERQVGYKHTGACYDALAEVLGFEDPARTAE 154

Query: 86  --LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
             L E+   +  V+  +  VL+      G   +ALE  G++K+F  +P    YNA++ + 
Sbjct: 155 RLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVL 214

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                  +A  V  EM       +  T       L K G+   A+ +L+   +     + 
Sbjct: 215 ASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLE---REDFKLDT 271

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
              T +ISGL + +  +EA     +M+ +   P+ V Y  LL GF K +++     ++  
Sbjct: 272 VLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINM 331

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI-------- 315
              +G  P    ++ L+     A+ Y  AY  + +M      P  V+Y + I        
Sbjct: 332 MMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREE 391

Query: 316 ---------------------------------RGLSEAGKVKDAMKLLSDMRERGIVPD 342
                                            R L   GK + A +++ +M  +G VPD
Sbjct: 392 LPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPD 451

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  +I   C    +D+A  L  E+ K    P+ +T+TILI   C+ G+++ AQ  F+
Sbjct: 452 ASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFD 511

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M  AGC P+V  + AL+    K+ +L +AN +F++M               G+  +  A
Sbjct: 512 EMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV--------------GDACYPNA 557

Query: 463 -SLQTMVEQYCTAGLIHKAYKILMQL-AESGNL---------------PDIITYNSLING 505
            +   +++  C AG I KA ++  +L   S N+               P+++TY +L+NG
Sbjct: 558 ITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNG 617

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK   ++ A  L   +   G  P+ + Y  L++G  +V   + A  +F +M + G  PS
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLL 624
              Y SL+    +  +  LA  +  Q L+D    +  +  ++ + L K GE E A+  L 
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            M+ K     +  YT  + GL + G+V   L +F
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 250/521 (47%), Gaps = 42/521 (8%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ + VI+ L +    D  +    E++   V+     + +LI  + K G  E+A   F +
Sbjct: 453 STYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C P+V  Y A+L+   + +    A  +++ MV   C PN +T+S LI+GL K+G+
Sbjct: 513 MRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGE 572

Query: 184 TEVAIKMLDEMTQRG----------------ILPNKFTYTIVISGLCQINRADEAYRLFL 227
            + A ++  ++                    I PN  TY  +++GLC+  +  +A+ L  
Sbjct: 573 IQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLD 632

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  +GC P+ + Y+AL++GFCK+  +D A  +     K G++P + +Y+ LID +F+  
Sbjct: 633 AMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDG 692

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     +M ++   P+VV Y  M+ GL + G+ + A+ LLS M ++G  P+   Y 
Sbjct: 693 RLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYT 752

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ALI G    G +D    L +++  +   PN  T+ ILI   C  G++DDA  L ++M++ 
Sbjct: 753 ALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQT 812

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ-- 465
                +  +   + G  K      +  L  +ME                  HD A +   
Sbjct: 813 HWPKYLQGYRTTVQGFSK--RFLASLGLLEEME-----------------SHDTAPIAPV 853

Query: 466 --TMVEQYCTAGLIHKA---YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
              +++ +  AG +  A   +K +M+++ S N+     + SLI   C    +  A+ L+ 
Sbjct: 854 YGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYS 913

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           E++ +G+ PD   +  L+ GL   ++  +A ++   + Q G
Sbjct: 914 EMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG 954



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 213/509 (41%), Gaps = 33/509 (6%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA     ++KD G  P  V YNAL+       +V+ A  + +     GF     +     
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFA 246

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L +  R+ +A     +   E  + D VL   MI GL EA    +AM  L  MR    +
Sbjct: 247 QALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYI 303

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  L+ GF     L   + +   +      P+   F  L+   C       A KL
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           FN+M   GC P   ++N  I  +C   EL    LL    ++ +   +        + V +
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLV-------ASCVLN 416

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           K +        C  G   KA++I+ ++   G +PD  TY  +I   C+   ++ A  LF+
Sbjct: 417 KINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQ 476

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++  G+ PD  TY  LI+   +    E A   F +M   GC+P+   Y +L+    + +
Sbjct: 477 EMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSK 536

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL---------LEMDFKL 630
           +   A  ++ + + D    +  +  + I+   + GE++ A +           +E DF  
Sbjct: 537 QLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYF 596

Query: 631 ---NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLC 681
              +   ++P    Y   + GLC+  +V +A ++   ++   A   P   V   L+ G C
Sbjct: 597 EGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAML--AAGCEPNQIVYDALVDGFC 654

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           K G +D A +VFL   K G++  P V  Y
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYL--PSVHTY 681



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 16/312 (5%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL--RSGNVSVVSDVFFVLISGY 108
           F+   K   L S  + +++I  + K    DL  + L ++   S N +VV+  +  ++ G 
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVT--YTAMVDGL 723

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            K G+ EKAL     M++  C P+V  Y A+++   +       L ++ +M    C PN 
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VT+ +LIN    +G  + A  +LDEM Q         Y   + G  +  R   +  L  +
Sbjct: 784 VTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEE 841

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS---YSCLIDGLFR 285
           M+    +P    Y  L++ F K  R++ AL L +   +      + S   ++ LI  L  
Sbjct: 842 MESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCL 901

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           + + +EA A Y +M    I PD+  +  +++GL E  K  +A++L   + + G+      
Sbjct: 902 SSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGV------ 955

Query: 346 YNALIKGFCDLG 357
            N     FCD G
Sbjct: 956 -NWEGNKFCDGG 966


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 175/648 (27%), Positives = 309/648 (47%), Gaps = 60/648 (9%)

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E  G  +EF   P V+  + +L +   K L   AL V+  M K   +P++ + + L+N L
Sbjct: 144 ELVGVYREFAFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNL 201

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K+G+T  A  +  +M + GI+P+ F  +I+++  C+  + DEA     KM++ G  P+ 
Sbjct: 202 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 261

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y++L+NG+  L  V+ A  +L+   + G    + +Y+ LI G  +  + DEA    R 
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321

Query: 299 MFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           M EE  + PD   YGV+I G    GK+ DA++LL +M   G+  + +  N+LI G+C  G
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 381

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            + +A  +   +   +  P+++++  L+ G CR G   +A  L +KM + G  P+V  +N
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--FLRLS--QGGNRV------- 458
            L+ GLC+ G  + A  +++ M        E+G +  L    ++   +G + +       
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501

Query: 459 ---HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                + +  TM+   C  G + +A +I  ++ + G  PD ITY +LI+G+CK  N+  A
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 561

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            K+   ++ + + P    Y +LI+GL +  R  +   +  +M   G TP+   Y +L+  
Sbjct: 562 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 621

Query: 576 SCRRRKFSLAFSLWLQYLRD------------IS-----GRDDESMKSIEEFLQKGEVEN 618
            C+      AFS + +   +            +S     GR DE+   +++ +  G   +
Sbjct: 622 WCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681

Query: 619 ------------AIQGLLE-MDFKLNDFQLAP---YTIWLIGLCQDGQVKEALNIFSVLV 662
                       AIQ + + +D     F L     Y I + GLC+ G+V +A   FS+L 
Sbjct: 682 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 741

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
               +    +   LIHG    G +D A  +    L+ G +  P +  Y
Sbjct: 742 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV--PNIVTY 787



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 255/530 (48%), Gaps = 46/530 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY + G   +A     KM +   +P V  YN +L    R   F  AL +++ M+
Sbjct: 405 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P+ V +S L++GL K    E A  +  ++  RG   ++ T+  +ISGLC++ +  
Sbjct: 465 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 524

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F KMKD GCSPD + Y  L++G+CK   V +A  +  + E++   P +  Y+ LI
Sbjct: 525 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 584

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLF+++R  E      +M    + P++V YG +I G  + G +  A     +M E G+ 
Sbjct: 585 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 644

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-----------------------DS--- 374
            +    + ++ G   LG +D+A  L  ++                          DS   
Sbjct: 645 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 704

Query: 375 ------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
                 LPN   + I I G+C+ G VDDA++ F+ +   G  P    +  LI G   AG 
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +++A  L  +M           L +G   V +  +   ++   C +  + +A ++  +L 
Sbjct: 765 VDEAFRLRDEM-----------LRRG--LVPNIVTYNALINGLCKSENVDRAQRLFHKLH 811

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P+++TYN+LI+G+CK+GN++ A KL  ++  +G+ P  VTY  LINGL +    E
Sbjct: 812 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDIS 597
            + ++  QM + G       Y +L+    R  +      L+ + ++R +S
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLS 921



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 300/677 (44%), Gaps = 66/677 (9%)

Query: 100 VFFVLISGYYK---VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            + +LI GY K   + + EK L   G  +E    PD   Y  +++   R      A+ + 
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 355

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM++L    N+   + LING  K G+   A  ++  M    + P+ ++Y  ++ G C+ 
Sbjct: 356 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               EA+ L  KM   G  P  + YN LL G C++   D+AL +     K G  P    Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 475

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S L+DGLF+ + ++ A   ++ +         + +  MI GL + GK+ +A ++   M++
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PD   Y  LI G+C    + QA  ++  + +    P+   +  LI G+ ++  + +
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 595

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQ 453
              L  +M   G  P++  + ALIDG CK G L+KA   +++M    +  N  +   +  
Sbjct: 596 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 655

Query: 454 GGNRVH--DKASL--QTMVEQ--------YCTAGLIHKAY-KILMQLAESGN---LPDII 497
           G  R+   D+A+L  Q MV+         +  + + + A  KI   L ES     LP+ I
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 715

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            YN  I G CK G ++ A + F  L LKG  PD+ TY TLI+G       ++AFR+  +M
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            + G  P+   Y +L+   C+                  S   D + +   +  QKG   
Sbjct: 776 LRRGLVPNIVTYNALINGLCK------------------SENVDRAQRLFHKLHQKGLFP 817

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           N +                 Y   + G C+ G +  A  +   ++E     +  +   LI
Sbjct: 818 NVVT----------------YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHA----YHLLC 731
           +GLCK G ++ +M +    +K G  +  ++  Y  L++  + S + +K+H      H+ C
Sbjct: 862 NGLCKHGDIERSMKLLNQMIKAG--VDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRC 919

Query: 732 RMKSVGYDLDACLYPKT 748
              +        L P+T
Sbjct: 920 LSTTAISHKQVDLRPQT 936



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 193/413 (46%), Gaps = 32/413 (7%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           +S  + + +IS L K        +  D+++    S     +  LI GY K  +  +A + 
Sbjct: 505 KSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            G M+     P + +YN++++  F+ +  +    +  EM      PNIVT+  LI+G  K
Sbjct: 565 KGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 624

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF-- 238
            G  + A     EMT+ G+  N    + ++SGL ++ R DEA  L  KM D G  PD   
Sbjct: 625 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 684

Query: 239 ------------------------------VAYNALLNGFCKLRRVDEALALLRSFEKDG 268
                                         + YN  + G CK  +VD+A          G
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           FVP   +Y  LI G   A   DEA+    +M    + P++V Y  +I GL ++  V  A 
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L   + ++G+ P+   YN LI G+C +G +D A  L+ ++ +    P+  T++ LI G+
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           C++G ++ + KL N+M KAG    +  +  L+ G  ++GE++K + L+  M I
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHI 917


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 177/622 (28%), Positives = 275/622 (44%), Gaps = 75/622 (12%)

Query: 28  FLSKTTVTSVIMKTKN-----PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF--D 80
           F S  T    +++  N     P    RFF W  K+       +    I  +L  NGF   
Sbjct: 44  FHSAVTQPEFLLRVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKP 103

Query: 81  LYW------------QTLDEL------RSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
            YW              LD L      R+  VSV   +  +LI  + K    EK L  F 
Sbjct: 104 AYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSV--KLLDLLIQVFAKKLILEKCLMVFY 161

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM      PDV   N VL +   K +      VY  M+K    P IVTF+ +++   K G
Sbjct: 162 KMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG 221

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           +   A+++LD M   G  PN  +Y ++++GL      D A  L  +M   G       YN
Sbjct: 222 EVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYN 281

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+ GFCK    +EA  L R     G +P + +Y+ ++  L R  R  +A  +   M  E
Sbjct: 282 PLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE 341

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PD+V Y  +I G S  G   +A+ L S++R + +VP    YN LI G C  G LD A
Sbjct: 342 DLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIA 401

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP----------- 411
           + ++ ++ K    P+  TFTIL+ G C+ G +  A++LF++M   G  P           
Sbjct: 402 KGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVG 461

Query: 412 ---------SVGM---------------FNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
                    + GM               +N LI+GLCK G  + AN L  KM +      
Sbjct: 462 ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRL------ 515

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                     V D  +  +++  +  +GL+ KA ++   + + G  P ++TY  LI+ + 
Sbjct: 516 -------EGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYA 568

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             G ++ A K F E+Q KG+ P+ +TY  LI GL + +  + A+ +F +M   G +P+  
Sbjct: 569 VRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKY 628

Query: 568 VYKSLMTWSCRRRKFSLAFSLW 589
            Y  L+  +   + +  A  L+
Sbjct: 629 TYTILINENSNLQYWQDALKLY 650



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 226/518 (43%), Gaps = 29/518 (5%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G+     +EV++K+LD + Q       F   +++         ++   +F KM ++G  P
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQ------VFAKKLIL---------EKCLMVFYKMVNNGLLP 170

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D    N +L        V+E   +     K    P + +++ ++D   +      A    
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVL 230

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M     +P+ V Y V++ GLS  G+   A +L+  M   G+    + YN LI+GFC  
Sbjct: 231 DVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKK 290

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
            + ++A  L+ E+  R +LP   T+  ++  +CR G V DA++  + M      P +  +
Sbjct: 291 EMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSY 350

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N LI G  + G   +A LLF ++             +  N V    +  T+++  C  G 
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSEL-------------RSKNLVPSVVTYNTLIDGGCRTGN 397

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +  A  +   + + G  PD++T+  L+ GFC++GN+  A +LF E+  +GL+PD + Y T
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
            I G  ++     AF +  +M   G  P    Y  L+   C+   F  A  L  +   + 
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 597 SGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
              D  +  SI    L  G +  A +   +M  K     +  YT+ +      G++  A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             F  + +        +   LI+GLCK   +D+A ++F
Sbjct: 578 KYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 171/400 (42%), Gaps = 76/400 (19%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY ++G+  +AL  F +++  +  P V  YN +++   R     +A  +  +M+K  
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN--------------------- 202
             P++VTF++L+ G  + G   +A ++ DEM  RG+ P+                     
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 203 --------------KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
                           TY ++I+GLC++   D+A  L  KM+  G  PD V Y +++   
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII--- 529

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
                                      ++ LI GL R     +A   +  M ++ I P V
Sbjct: 530 ---------------------------HAHLISGLLR-----KAEEVFSDMLKKGIHPSV 557

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y V+I   +  G++  A K   +M+++G+ P+   YNALI G C   ++D A +L  E
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK--- 425
           +  +   PN +T+TILI          DA KL+  M      P     +AL+  L K   
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677

Query: 426 -AGELEKANLLFYKMEIGKN--PTLFLRLSQGGNRVHDKA 462
               L   NL    +EI        F++L +  N  H +A
Sbjct: 678 LLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSHFRA 717



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +L+ G+ ++G+   A E F +M     +PD   Y   +    +      A  +  EM 
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+++T+++LINGL K G  + A +++ +M   GI+P+  TYT +I          
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +F  M   G  P  V Y  L++ +    R+D A       +  G  P + +Y+ LI
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL +    D AY  + +M  + + P+   Y ++I   S     +DA+KL  DM +R I 
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIK 659

Query: 341 PDTYCYNALIK 351
           PD+  ++AL+K
Sbjct: 660 PDSCTHSALMK 670



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 121/247 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  DE+ S  +      +   I G  K+G+  KA     +MK     PD+  YN ++N  
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +   F  A  +  +M     +P+ VT++ +I+    SG    A ++  +M ++GI P+ 
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT++I       R D A + F +M+D G SP+ + YNAL+ G CK   +D A  L   
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            E  G  P   +Y+ LI+     + + +A   Y+ M + +I+PD   +  +++ LS+  K
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677

Query: 324 VKDAMKL 330
           +   ++L
Sbjct: 678 LLAVLRL 684



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 36/345 (10%)

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           SV + + LI    K   LEK  ++FYKM   G  P +     +  NRV      ++MV +
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDV-----RNCNRVLKLLKDKSMVNE 190

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
                 + + Y ++++       P I+T+N++++  CK G +  A+++   +++ G  P+
Sbjct: 191 ------VEEVYSVMIKCQIR---PTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPN 241

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V+Y  L+NGL      + A  +  QM   G   S   Y  L+   C++  F  A  L  
Sbjct: 242 DVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLR- 300

Query: 591 QYLRDISGRDDESMKSIEEF-------LQKGEVENAIQGLLEMDFKLNDF---QLAPYTI 640
              R++ GR   ++ ++  +        + G V +A + L   D  +N+     L  Y  
Sbjct: 301 ---REMLGRG--ALPTVVTYNTIMYSLCRLGRVSDARRYL---DVMVNEDLMPDLVSYNT 352

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G  + G   EAL +FS L     + +  +   LI G C+ G LD+A  +    +K+G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             L P V  + +    F +      A  L   M S G   D   Y
Sbjct: 413 --LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAY 455


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 313/658 (47%), Gaps = 58/658 (8%)

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E  G  +EF   P V+  + +L +   K L   AL V+  M K   +P++ + + L+N L
Sbjct: 110 ELVGVYREFAFSPTVF--DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNL 167

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K+G+T  A  +  +M + GI+P+ F  +I+++  C+  + DEA     KM++ G  P+ 
Sbjct: 168 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 227

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y++L+NG+  L  V+ A  +L+   + G    + +Y+ LI G  +  + DEA    R 
Sbjct: 228 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 287

Query: 299 MFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           M EE  + PD   YGV+I G    GK+ DA++LL +M   G+  + +  N+LI G+C  G
Sbjct: 288 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 347

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            + +A  +   +   +  P+++++  L+ G CR G   +A  L +KM + G  P+V  +N
Sbjct: 348 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 407

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--FLRLS--QGGNRV------- 458
            L+ GLC+ G  + A  +++ M        E+G +  L    ++   +G + +       
Sbjct: 408 TLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 467

Query: 459 ---HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                + +  TM+   C  G + +A +I  ++ + G  PD ITY +LI+G+CK  N+  A
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA 527

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            K+   ++ + + P    Y +LI+GL +  R  +   +  +M   G TP+   Y +L+  
Sbjct: 528 FKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG 587

Query: 576 SCRRRKFSLAFSLWLQYLRD------------IS-----GRDDESMKSIEEFLQKGEVEN 618
            C+      AFS + +   +            +S     GR DE+   +++ +  G   +
Sbjct: 588 WCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 647

Query: 619 ------------AIQGLLE-MDFKLNDFQLAP---YTIWLIGLCQDGQVKEALNIFSVLV 662
                       AIQ + + +D     F L     Y I + GLC+ G+V +A   FS+L 
Sbjct: 648 HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLS 707

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
               +    +   LIHG    G +D A  +    L+ G +      N L+  L  S++
Sbjct: 708 LKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 765



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 243/507 (47%), Gaps = 19/507 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLI GY + G  + A+    +M     + +++I N+++N   ++     A  V   MV
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             N  P+  +++ L++G  + G T  A  + D+M Q GI P   TY  ++ GLC++   D
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A +++  M   G +PD V Y+ LL+G  K+   + A  L +     GF     +++ +I
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 480

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL +  +  EA   + KM +    PD + Y  +I G  +A  V  A K+   M    I 
Sbjct: 481 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 540

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    YN+LI G      L +   L  E+  R   PN  T+  LI G C+ GM+D A   
Sbjct: 541 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 600

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP--TLFLRLS---QG 454
           + +M + G   ++ + + ++ GL + G +++ANLL  KM + G  P    FL+       
Sbjct: 601 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 660

Query: 455 GNRVHDK--ASLQTM-----------VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
             ++ D    S +T            +   C  G +  A +    L+  G +PD  TY +
Sbjct: 661 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 720

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           LI+G+   GN++ A +L  E+  +GL P+ VTY  LINGL + +  + A R+F ++ Q G
Sbjct: 721 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 780

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             P+   Y +L+   C+      AF L
Sbjct: 781 LFPNVVTYNTLIDGYCKIGNMDAAFKL 807



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 241/512 (47%), Gaps = 24/512 (4%)

Query: 100 VFFVLISGYYK---VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            + +LI GY K   + + EK L   G  +E    PD   Y  +++   R      A+ + 
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLR--GMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLL 321

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM++L    N+   + LING  K G+   A  ++  M    + P+ ++Y  ++ G C+ 
Sbjct: 322 DEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 381

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               EA+ L  KM   G  P  + YN LL G C++   D+AL +     K G  P    Y
Sbjct: 382 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 441

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S L+DGLF+ + ++ A   ++ +         + +  MI GL + GK+ +A ++   M++
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 501

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PD   Y  LI G+C    + QA  ++  + +    P+   +  LI G+ ++  + +
Sbjct: 502 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 561

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQ 453
              L  +M   G  P++  + ALIDG CK G L+KA   +++M    +  N  +   +  
Sbjct: 562 VTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVS 621

Query: 454 GGNRVH--DKASL--QTMVEQ--------YCTAGLIHKAY-KILMQLAESGN---LPDII 497
           G  R+   D+A+L  Q MV+         +  + + + A  KI   L ES     LP+ I
Sbjct: 622 GLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNI 681

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            YN  I G CK G ++ A + F  L LKG  PD+ TY TLI+G       ++AFR+  +M
Sbjct: 682 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 741

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            + G  P+   Y +L+   C+      A  L+
Sbjct: 742 LRRGLVPNIVTYNALINGLCKSENVDRAQRLF 773



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 224/461 (48%), Gaps = 45/461 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY + G   +A     KM +   +P V  YN +L    R   F  AL +++ M+
Sbjct: 371 YNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P+ V +S L++GL K    E A  +  ++  RG   ++ T+  +ISGLC++ +  
Sbjct: 431 KRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMV 490

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F KMKD GCSPD + Y  L++G+CK   V +A  +  + E++   P +  Y+ LI
Sbjct: 491 EAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLI 550

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLF+++R  E      +M    + P++V YG +I G  + G +  A     +M E G+ 
Sbjct: 551 SGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLS 610

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-----------------------DS--- 374
            +    + ++ G   LG +D+A  L  ++                          DS   
Sbjct: 611 ANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDE 670

Query: 375 ------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
                 LPN   + I I G+C+ G VDDA++ F+ +   G  P    +  LI G   AG 
Sbjct: 671 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 730

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +++A  L  +M           L +G   V +  +   ++   C +  + +A ++  +L 
Sbjct: 731 VDEAFRLRDEM-----------LRRG--LVPNIVTYNALINGLCKSENVDRAQRLFHKLH 777

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
           + G  P+++TYN+LI+G+CK+GN++ A KL  ++  +G+ P
Sbjct: 778 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 166/346 (47%), Gaps = 32/346 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +ISG  K+G   +A E F KMK+  C PD   Y  +++   +      A  V   M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P+I  ++ LI+GL KS +      +L EM  RG+ PN  TY  +I G C+    
Sbjct: 535 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 594

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP-------- 271
           D+A+  + +M ++G S + +  + +++G  +L R+DEA  L++     GF P        
Sbjct: 595 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 654

Query: 272 --RLGS----------------------YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             R  +                      Y+  I GL +  + D+A  ++  +  +   PD
Sbjct: 655 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
              Y  +I G S AG V +A +L  +M  RG+VP+   YNALI G C    +D+A+ L  
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           ++ ++   PN  T+  LI G C+ G +D A KL +KM + G  PS+
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 32/284 (11%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S   +++  LISG +K     +  +   +M      P++  Y A+++   ++ +   A 
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--------------- 198
           + Y+EM +     NI+  S +++GL + G+ + A  ++ +M   G               
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 658

Query: 199 -----------------ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
                            +LPN   Y I I+GLC+  + D+A R F  +   G  PD   Y
Sbjct: 659 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 718

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             L++G+     VDEA  L     + G VP + +Y+ LI+GL +++  D A   + K+ +
Sbjct: 719 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 778

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           + + P+VV Y  +I G  + G +  A KL   M E GI P   C
Sbjct: 779 KGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQC 822



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 7/231 (3%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            F  Y++  +   S N+ + S     ++SG Y++G  ++A     KM +    PD   + 
Sbjct: 597 AFSSYFEMTENGLSANIIICS----TMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HE 649

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             L    R            E  K   LPN + +++ I GL K+GK + A +    ++ +
Sbjct: 650 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 709

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G +P+ FTY  +I G       DEA+RL  +M   G  P+ V YNAL+NG CK   VD A
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 769

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
             L     + G  P + +Y+ LIDG  +    D A+    KM EE I P +
Sbjct: 770 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 265/540 (49%), Gaps = 23/540 (4%)

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           +L K N  D   +  ++L        +  +  +I GY   G  ++A     + K     P
Sbjct: 64  VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
            V  YN +L    +K+    AL ++ EM K + +PN+ T+++LI+ L + GK   A+++ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 182

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           D+M + G+ PN  T  I+I  LC+  + +EA  +F  M D  C+P+ V +++L++G  K 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            RVD+A +L       G VP    Y+ LI   F+  R ++ +  Y++M      PD+ L 
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
              +  + +AG+ +    L  ++   G +PD   Y+ LI G    GL ++   L   + +
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +  + +TH +  +I G C++G V+ A +L  +M+  G  P+V  + ++IDGL K   L++
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 432 ANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK---ILM 485
           A +LF + +   I  N  ++  L  G  +V        ++E+    GL    Y    +L 
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 486 QLAESGNL----------------PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            L ++  +                P+ ITY+ LING C+V   N A   ++E+Q  GL+P
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 542

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +++TY T+I+GL +     +A  +F +   NG  P  A Y +++       K   A++L+
Sbjct: 543 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 602



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 169/627 (26%), Positives = 286/627 (45%), Gaps = 71/627 (11%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLING----------LSKSGKTEVAIKMLDEMTQRGILP 201
           A  +   M K    P    +++LI            L K+ + + A+++ +++ Q   +P
Sbjct: 29  AFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRKVP 88

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
             + Y  +I G     + DEAY L  + K  G  P  +AYN +L    K RRV+EAL + 
Sbjct: 89  CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF 148

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
              ++D  VP + +Y+ LID L R  + + A      M    + P+V+   +MI  L +A
Sbjct: 149 EEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKA 207

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            K+++A  +   M ++   P+   +++LI G    G +D A SL  ++     +P    +
Sbjct: 208 QKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVY 267

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           T LI    + G  +D  K++ +M   GC P + + N  +D + KAGE EK   LF ++  
Sbjct: 268 TSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-- 325

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
             N   F         + D  S   ++     AGL ++ Y++   + E G + D   YN+
Sbjct: 326 --NAHGF---------IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +I+GFCK G +N A +L +E+++KG  P  VTYG++I+GL ++DR ++A+ +F +   NG
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA-- 619
              +  VY SL+    +                   GR DE+   +EE +QKG   N   
Sbjct: 435 IKLNVVVYSSLIDGFGK------------------VGRIDEAYLIMEELMQKGLTPNVYT 476

Query: 620 ----IQGLLEMDF---------KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
               +  L++ +           + D +  P    Y+I + GLC   +V++    F    
Sbjct: 477 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLC---RVRKFNKAFVFWQ 533

Query: 663 ECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           E + +   P+ +    +I GL K G +  A  +F     NG I      N ++  L  S 
Sbjct: 534 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL--SS 591

Query: 720 DNKKVHAYHLL--CRMKSVGYDLDACL 744
            NK + AY L    R+K        C+
Sbjct: 592 ANKAMDAYALFEETRLKGCNIHTKTCV 618



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 236/502 (47%), Gaps = 14/502 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + +++ L K    +   +  +E++   V  V   + +LI    + G    ALE  
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVP-TYNILIDMLCREGKLNAALEIR 182

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M+     P+V   N +++   + Q    A +++  M    C PN VTFS LI+GL K 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A  + ++M   G +P    YT +I    +  R ++ ++++ +M  +GCSPD    
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N  ++   K    ++  AL R     GF+P   SYS LI GL +A   +E Y  +  M E
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +    D   Y  +I G  ++GKV  A +LL +M+ +G  P    Y ++I G   +  LD+
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E        N   ++ LI G  + G +D+A  +  ++ + G  P+V  +N L+D
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L KA E+ +A + F  M+  K P              ++ +   ++   C     +KA+
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPP-------------NQITYSILINGLCRVRKFNKAF 529

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
               ++ + G  P+ ITY ++I+G  K GNI  A  LF   +  G  PDS +Y  +I GL
Sbjct: 530 VFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589

Query: 542 QRVDREEDAFRIFGQMPQNGCT 563
              ++  DA+ +F +    GC 
Sbjct: 590 SSANKAMDAYALFEETRLKGCN 611



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/666 (23%), Positives = 286/666 (42%), Gaps = 99/666 (14%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL------ 151
           S++   L++   K     +A +    M++F  +P    Y  ++    +  L LL      
Sbjct: 10  SNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIG---KVGLMLLFPWVLC 66

Query: 152 -------ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                  A+ ++ ++ +   +P    ++ +I G   +GK + A  +L+    +G +P+  
Sbjct: 67  KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 126

Query: 205 TYTIVISGLCQINRADEAYRLFLKMK---------------------------------- 230
            Y  +++ L +  R +EA R+F +MK                                  
Sbjct: 127 AYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDME 186

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
            +G  P+ +  N +++  CK ++++EA ++    +     P   ++S LIDGL +  R D
Sbjct: 187 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 246

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +AY+ Y KM +    P  ++Y  +IR   + G+ +D  K+  +M   G  PD    N  +
Sbjct: 247 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 306

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
                 G  ++ R+L  EI     +P+  +++ILI G+ + G+ ++  +LF  M++ GC 
Sbjct: 307 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCV 366

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
                +NA+IDG CK+G++ KA  L  +M++ G  PT+               +  ++++
Sbjct: 367 LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV--------------VTYGSVID 412

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                  + +AY +  +   +G   +++ Y+SLI+GF KVG I+ A  + +EL  KGL P
Sbjct: 413 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 472

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +  T+  L++ L + +   +A   F  M    C P+   Y  L+   CR RKF+ AF  W
Sbjct: 473 NVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFW 532

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
                             +E  + G   N I                 YT  + GL + G
Sbjct: 533 ------------------QEMQKLGLKPNTIT----------------YTTMISGLAKAG 558

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
            + EA  +FS       I    S   +I GL        A  +F  T   G  +  + C 
Sbjct: 559 NILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCV 618

Query: 710 YLLRSL 715
            LL +L
Sbjct: 619 VLLDAL 624



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 184/393 (46%), Gaps = 55/393 (13%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K +G  +Y + +    S ++++++      +   +K G+ EK    F ++      PD  
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLIN----TYMDCVFKAGETEKGRALFREINAHGFIPDAR 335

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y+ +++   +  L      ++Y M +  C+ +   ++ +I+G  KSGK   A ++L+EM
Sbjct: 336 SYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM 395

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             +G  P   TY  VI GL +I+R DEAY LF + K +G   + V Y++L++GF K+ R+
Sbjct: 396 KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRI 455

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLID--------------------------------- 281
           DEA  ++    + G  P + +++CL+D                                 
Sbjct: 456 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSIL 515

Query: 282 --GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             GL R +++++A+ ++++M +  ++P+ + Y  MI GL++AG + +A  L S  +  G 
Sbjct: 516 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGG 575

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD+  YNA+I+G         A +L  E   +    N HT T ++              
Sbjct: 576 IPDSASYNAMIEGLSSANKAMDAYALFEETRLKGC--NIHTKTCVV-------------- 619

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           L + + KA C     +  A++    K+    ++
Sbjct: 620 LLDALHKAECLEQAAIVGAVLKETAKSQHASRS 652



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 3/209 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  ++EL    ++     +  L+    K  +  +AL  F  MK+
Sbjct: 443 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 502

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   Y+ ++N   R + F  A   + EM KL   PN +T++ +I+GL+K+G    
Sbjct: 503 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 562

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +       G +P+  +Y  +I GL   N+A +AY LF + +  GC+        LL+
Sbjct: 563 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 622

Query: 247 GFCKLRRVDEAL---ALLRSFEKDGFVPR 272
              K   +++A    A+L+   K     R
Sbjct: 623 ALHKAECLEQAAIVGAVLKETAKSQHASR 651


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 234/428 (54%), Gaps = 13/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ +MVK    P+IV F+ L++ + K  K +V I +  +M   GI  + +T+ IVI+
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C   +   A  +  KM   G  PD V   +L+NGFC+  RV +A++L+    + G+ P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +ID L + KR ++A+ +++++  + I P+VV Y  ++ GL  + +  DA +LL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM ++ I P+   Y+AL+  F   G + +A+ L  E+ +    P+  T++ L+ G+C +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D+A ++F+ M   GC   V  +N LI+G CKA  +E    LF +M            
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM------------ 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V +  +  T+++ +  AG + KA +   Q+   G  PDI TYN L+ G C  G 
Sbjct: 357 SQRG-LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL +F+++Q + +  D VTY T+I G+ +  + E+A+ +F  +   G  P    Y +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 572 LMTWSCRR 579
           +M+  C +
Sbjct: 476 MMSGLCTK 483



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 230/446 (51%), Gaps = 15/446 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++ F  M +    P +  +N +L+   + + + + +++  +M  L    ++ TF+++IN
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                 +  +A+ +L +M + G  P++ T   +++G C+ NR  +A  L  KM + G  P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D VAYNA+++  CK +RV++A    +  E+ G  P + +Y+ L++GL  + R+ +A    
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M ++KI P+V+ Y  ++    + GKV +A +L  +M    I PD   Y++L+ G C  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D+A  +   +  +  L +  ++  LI G C+   V+D  KLF +M + G   +   +
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368

Query: 417 NALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N LI G  +AG+++KA   F +M+  G +P ++              +   ++   C  G
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW--------------TYNILLGGLCDNG 414

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + KA  I   + +     DI+TY ++I G CK G +  A  LF  L LKGL+PD VTY 
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNG 561
           T+++GL       +   ++ +M Q G
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 13/433 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K+   +  +    KM+    + D+Y +N V+N         LAL++  +M+
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+ VT   L+NG  +  +   A+ ++D+M + G  P+   Y  +I  LC+  R +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+  F +++  G  P+ V Y AL+NG C   R  +A  LL    K    P + +YS L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  +  EA   + +M    I+PD+V Y  ++ GL    ++ +A ++   M  +G +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D   YN LI GFC    ++    L  E+ +R  + NT T+  LI G  + G VD AQ+ 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F++M+  G  P +  +N L+ GLC  GELEKA ++F  M             Q      D
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-------------QKREMDLD 434

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++   C  G + +A+ +   L+  G  PDI+TY ++++G C  G ++    L+ 
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494

Query: 521 ELQLKGLRPDSVT 533
           +++ +GL  +  T
Sbjct: 495 KMKQEGLMKNDCT 507



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 215/500 (43%), Gaps = 82/500 (16%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  +M +    P+   +  ++S + ++ + D    L  KM+  G   D   +N ++N
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC   +V  AL++L    K G+ P   +   L++G  R  R  +A +   KM E   +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  +I  L +  +V DA     ++  +GI P+   Y AL+ G C+      A  L 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ K+   PN  T++ L+    +NG V +A++LF +M +    P +  +++L++GLC  
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC-- 306

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                                          +HD+               I +A ++   
Sbjct: 307 -------------------------------LHDR---------------IDEANQMFDL 320

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G L D+++YN+LINGFCK   +   +KLF+E+  +GL  ++VTY TLI G  +   
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            + A   F QM   G +P    Y  L+   C                             
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLC----------------------------- 411

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                  GE+E A+    +M  +  D  +  YT  + G+C+ G+V+EA ++F  L     
Sbjct: 412 -----DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 667 IVTPPSCVKLIHGLCKRGYL 686
                +   ++ GLC +G L
Sbjct: 467 KPDIVTYTTMMSGLCTKGLL 486



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 170/359 (47%), Gaps = 10/359 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    +  +    E+    +      +  L++G         A      M +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y+A+L+   +    L A  ++ EMV+++  P+IVT+S L+NGL    + + 
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDE 313

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M D M  +G L +  +Y  +I+G C+  R ++  +LF +M   G   + V YN L+ 
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF +   VD+A       +  G  P + +Y+ L+ GL      ++A   +  M + +++ 
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  +IRG+ + GKV++A  L   +  +G+ PD   Y  ++ G C  GLL +  +L 
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
            ++ +   + N  T +        +G +  + +L  KM   G  PS  +   +  G+CK
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPS--LLKDIKSGVCK 542



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 56/360 (15%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
           R+  ++DA  LF+ M K+  FPS+  FN L+  + K  + +    L  KME+ G    L+
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 449 ----------------LRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
                           L LS  G  +      D+ ++ ++V  +C    +  A  ++ ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PDI+ YN++I+  CK   +N A   FKE++ KG+RP+ VTY  L+NGL    R 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            DA R+   M +   TP+   Y +L+                                  
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALL---------------------------------- 267

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + F++ G+V  A +   EM     D  +  Y+  + GLC   ++ EA  +F ++V    +
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               S   LI+G CK   ++  M +F    + G +      N L++    + D  K   +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 173/653 (26%), Positives = 303/653 (46%), Gaps = 35/653 (5%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +  L+ F +M     +PD  +Y   +  A +     LA+ ++  M +   +PN+  +++L
Sbjct: 48  DNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVL 107

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I GL K  +   A K+  EM+ R ++PN+ T+  +I G C+    D A  L  +MK    
Sbjct: 108 IGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKV 167

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR-YDEAY 293
            P  + +N+LL+G CK RR++EA  +L   + +GFVP   +YS + DGL ++      A 
Sbjct: 168 EPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAAL 227

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             YR+   + ++ D     +++ GL + GKV+ A ++L  + E G+VP    YN ++ G+
Sbjct: 228 DLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGY 287

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +G +D+A     ++  R   PN   F  +I   C   M+D A++   KM   G  PSV
Sbjct: 288 CQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSV 347

Query: 414 GMFNALIDG---LCKAGEL-----------EKANLLFYKMEI------GK--NPTLFLRL 451
             +N LIDG   LC                EK N++ Y   I      GK     + LR 
Sbjct: 348 ETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRD 407

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
             G   + +      +++  CT G + +A +   +++++G    I+TYNSLI G CK+G 
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A ++F  +   G  PD +TY +LI+G       +    ++  M + G  P+   +  
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHP 527

Query: 572 LMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           L++  C +    L  +L+ + L+ ++S         I  + + G V+ A      +  ++
Sbjct: 528 LIS-GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKA----FSLQKEM 582

Query: 631 NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            D  + P    Y   ++G  ++G++ E  ++   +     I    +   LI G C     
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDF 642

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           + A   +   L+NGF+    +CN L   L   KD +   A  +   M + G D
Sbjct: 643 NGAYVWYREMLENGFLPNVCICNELSTGL--RKDGRLQEAQSICSEMIANGMD 693



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 241/497 (48%), Gaps = 22/497 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYE 158
            F  L+SG  K    E+A     ++K     PD + Y+ + +   +       AL +Y E
Sbjct: 173 TFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE 232

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            +      +  T S+L+NGL K GK E A ++L  + + G++P +  Y  +++G CQI  
Sbjct: 233 AIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D A     +M+  G  P+ +A+N++++ FC+++ +D+A   ++     G  P + +Y+ 
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  R   +   +    +M E   +P+V+ YG +I  L + GK+ +A  +L DM  RG
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           ++P+   YN LI G C +G L +A     E+ K        T+  LI G+C+ G + +A+
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--FLRLSQGG 455
           ++F  +   G  P V  +N+LI G   AG  +K   L+  M ++G  PT+  F  L  G 
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532

Query: 456 ------------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
                             N   D+     M+  Y   G + KA+ +  ++ + G  PD  
Sbjct: 533 SKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNK 592

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYNSLI G  K G ++    L  +++ KGL P++ TY  LI G   +     A+  + +M
Sbjct: 593 TYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM 652

Query: 558 PQNGCTPSPAVYKSLMT 574
            +NG  P+  +   L T
Sbjct: 653 LENGFLPNVCICNELST 669



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 215/450 (47%), Gaps = 25/450 (5%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           LP+     +++  L +S K +  + +  EM   G  P+K  Y   +    ++     A  
Sbjct: 28  LPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAME 87

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           LF  MK     P+   YN L+ G CK +R+ +A  L         VP   +++ LIDG  
Sbjct: 88  LFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYC 147

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A   D A     +M +EK+EP ++ +  ++ GL +A ++++A  +L++++  G VPD +
Sbjct: 148 KAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGF 207

Query: 345 CYNALIKGF--CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y+ +  G    D G    A  L  E   +    + +T +IL+ G+C+ G V+ A+++  
Sbjct: 208 TYSIIFDGLLKSDDG-AGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLK 266

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME--------IGKNPTL------- 447
            + + G  P   ++N +++G C+ G++++A L   +ME        I  N  +       
Sbjct: 267 SLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQ 326

Query: 448 -------FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                  +++   G        +   +++ Y    +  + ++IL ++ E+G  P++I+Y 
Sbjct: 327 MIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYG 386

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           SLIN  CK G I  A  + +++  +G+ P++  Y  LI+G   V +  +A R F +M +N
Sbjct: 387 SLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKN 446

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           G   +   Y SL+   C+  K   A  ++ 
Sbjct: 447 GIGATIVTYNSLIKGLCKMGKLKEAEEMFF 476



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 227/513 (44%), Gaps = 69/513 (13%)

Query: 244 LLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +L   C   ++   ++ L  F  ++G +P  G    +++ L  +K++D     +++M   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PD ++YG  +    + G +K AM+L   M+ R +VP+ + YN LI G C    +  A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  E+  R+ +PN  TF  LI G C+ G VD A  L  +M+K    PS+  FN+L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 423 LCKAGELEKANLL----------------------FYKMEIGKNPTLFLRLSQGGNRVH- 459
           LCKA  +E+A  +                        K + G    L L     G  V  
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++   C  G + KA ++L  L E G +P  + YN+++NG+C++G+++ A+   
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 520 KELQLKGLRPDSVTYGTLING---LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           ++++ +GLRP+ + + ++I+    +Q +D+ E+  +   +M   G  PS   Y  L+   
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK---KMVGKGIAPSVETYNILIDGY 357

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ------------GLL 624
            R   FS  F +                  +EE  + GE  N I              +L
Sbjct: 358 GRLCVFSRCFQI------------------LEEMEENGEKPNVISYGSLINCLCKDGKIL 399

Query: 625 EMDFKLNDF-------QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           E +  L D            Y + + G C  G+++EAL  F  + +     T  +   LI
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLI 459

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            GLCK G L  A ++F      G    P V  Y
Sbjct: 460 KGLCKMGKLKEAEEMFFLITSTGHC--PDVITY 490



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 1/355 (0%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           T++++ S  +      F  +I  + ++   +KA E   KM      P V  YN +++   
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG 358

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R  +F     +  EM +    PN++++  LIN L K GK   A  +L +M  RG+LPN  
Sbjct: 359 RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN 418

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y ++I G C + +  EA R F +M  +G     V YN+L+ G CK+ ++ EA  +    
Sbjct: 419 IYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G  P + +Y+ LI G   A    +    Y  M +  ++P +  +  +I G S+ G +
Sbjct: 479 TSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-I 537

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           K    L ++M +  + PD   YNA+I  + + G + +A SLQ E+      P+  T+  L
Sbjct: 538 KLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSL 597

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           I G  + G + + + L + M+  G  P    ++ LI G C   +   A + + +M
Sbjct: 598 ILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREM 652


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 267/559 (47%), Gaps = 20/559 (3%)

Query: 33  TVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           T TS+I+   K  N  + F  F    K     +  + SA+I+ L      +     L+E+
Sbjct: 239 TYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM 298

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
               +      + + I      G   +A++  GKMK+  C P+V  Y A+++   R   F
Sbjct: 299 IDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
            +A+ VY++M+    +P  VT+S LIN L   G+ E A+ + + M     LPN  TY ++
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G C I    +A  +F +M  +G SP+ + YN +++ + K   ++ A+ LL   + +G 
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
                +Y+ LI G  R  + + A++ + +M E  I P+VV Y  +I G     KV DA+ 
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L   M E G VP +  YN +I GF     + +A +   ++ K+  LPN  T+T  I G+C
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           +NG    A K+F++M+K   FP++  +++LIDGLC+ G+ E A  L   ++ G  P +  
Sbjct: 599 KNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL---LDDGCEPNV-- 653

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  T+V   C  G  ++A +++  + + G  P    Y +L+ G CK 
Sbjct: 654 ------------DTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN 701

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             +  ALK+F  +   G +P    Y  LI  L + +  + A  +F  M +        V+
Sbjct: 702 LEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVW 761

Query: 570 KSLMTWSCRRRKFSLAFSL 588
             L+    +  +  L+  L
Sbjct: 762 TVLLDGLLKEGETDLSLEL 780



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 196/743 (26%), Positives = 316/743 (42%), Gaps = 90/743 (12%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           L  L+P L    V +++    N +   RFF W +   R   F  + +    +L     D 
Sbjct: 69  LSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVS---RTHFFKHDMSCFVSMLNRLVRDR 125

Query: 82  YWQTLDELR---------SGNVSVVSDVFFVLISGY---YKVGDCEKALESFGK------ 123
            +   D +R          G V  V  V   + + Y   Y +      L   GK      
Sbjct: 126 LFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGL 185

Query: 124 -------MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
                  M     +P+++ +NA++ I   K     A  +   +      P+  T++ LI 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  K+G  ++A +M D M + G  PN  TY+ +I+GLC   R +EA  +  +M D G  P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
              AY   +   C   R  EA+ LL   +K G  P + +Y+ LI GL R  +++ A   Y
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM  + + P  V Y  +I  L   G+ + A+ +   M     +P+T  YN +IKGFC +
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G + +A ++  ++ K    PN  T+ I+I    + G +++A +L   M+  G       +
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNP----------------------TLFLRLSQ 453
             LI G  + G+LE A  LF +M E G +P                       LF ++ +
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
            GN V    +   M+  +     I +A     ++ + G LP++ITY S I+G CK G  +
Sbjct: 546 SGN-VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A K+F E++ +   P+  TY +LI+GL +  + EDA R+      +GC P+   Y +L+
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLV 660

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C +                  GR  E+ + +E   +KG     +Q   E+       
Sbjct: 661 RGLCGK------------------GRCYEADQLVESMKKKG-----LQPSEEI------- 690

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
               Y   L+G C++ +V+ AL IF  +V             LI  LCK  +   A  +F
Sbjct: 691 ----YRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMF 746

Query: 694 LYTLKNGFILRPRVCNYLLRSLL 716
              LK  +     V   LL  LL
Sbjct: 747 QTMLKKHWNSDEVVWTVLLDGLL 769



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 171/341 (50%), Gaps = 4/341 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I +  K    +   + L+ ++   + + +  +  LISG+ + G  E A   F +M E  
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P+V  YNA++N          ALA++++MV+   +P+  T++++I+G SK+ +   A 
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
               +M ++G+LPN  TYT  I GLC+  R   A+++F +MK     P+   Y++L++G 
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL 632

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+  + ++A  LL     DG  P + +Y+ L+ GL    R  EA      M ++ ++P  
Sbjct: 633 CQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            +Y  ++ G  +  +V+ A+K+   M   G  P    Y ALI   C      +A+ +   
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + K+    +   +T+L+ G+ + G  D + +L + ME   C
Sbjct: 749 MLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNC 789


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 233/462 (50%), Gaps = 14/462 (3%)

Query: 113 DCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           +C +   S  +  EF+    D+  +N ++N   +      + +V+  ++K    PN +T 
Sbjct: 70  NCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITL 129

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI GL   G+   A+   D++   G   NK  Y  +I+GLC++ +   A +L  ++  
Sbjct: 130 TTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDG 189

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               P+ V YN +++  CK++ V+EA  L       G  P + +YS LI G     + ++
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + KM  E+I PDV  + +++ G  + G+VK+A  +L+ M ++GI PD   Y +L+ 
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C +  +++A+S+   + +     N  ++ I+I G C+   VD+A  LF +M      P
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP 369

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            V  +N+LIDGLCK+G++  A  L  +M     P             HDK +  ++++  
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP-------------HDKITYNSILDAL 416

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C    + KA  +L ++ + G  PD+ TY  LI+G CK G +  A  +F++L +KG     
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            TY  +I G    D  + A  +  +M  NGC P+   Y+ ++
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIII 518



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 240/481 (49%), Gaps = 13/481 (2%)

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           ++   D    + SF ++   +  P ++ +  +L    +   +  A++++ EM       +
Sbjct: 31  HHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASD 90

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +VTF++LIN  S+ G T  +  +   + ++G  PN  T T +I GLC   +  +A     
Sbjct: 91  LVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHD 150

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           K+   G   + V Y  L+NG CK+ +   AL LLR  +     P +  Y+ +ID + + K
Sbjct: 151 KVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 210

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             +EA+  Y +M  + I PDVV Y  +I G    GK+ DA+ L + M    I PD Y ++
Sbjct: 211 LVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFS 270

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            L+ GFC  G + +A+++   + K+   P+  T+  L+ G C    V+ A+ +FN M + 
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G   +V  +N +I+G CK  ++++A  LF +M                N + D  +  ++
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHC-------------KNIIPDVVTYNSL 377

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C +G I  A K++ ++ + G   D ITYNS+++  CK   ++ A+ L  +++ +G+
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +PD  TY  LI+GL +  R +DA  IF  +   G   +   Y  ++   C    F  A +
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA 497

Query: 588 L 588
           L
Sbjct: 498 L 498



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 243/521 (46%), Gaps = 50/521 (9%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P  F +  ++  L +IN    A  L  +M+ +G + D V +N L+N F +L     + ++
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
             +  K G+ P   + + LI GL    +  +A  ++ K+       + V YG +I GL +
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+   A++LL  +  + + P+   YN +I   C + L+++A  L  E+  +   P+  T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           ++ LI G C  G ++DA  LFNKM      P V  F+ L+DG CK G +++A N+L   M
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G  P              D  +  ++++ YC    ++KA  I   +A+ G   ++ +Y
Sbjct: 294 KQGIKP--------------DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSY 339

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +INGFCK+  ++ A+ LFKE+  K + PD VTY +LI+GL +  +   A ++  +M  
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G       Y S++   C+  +   A +L       ++   DE ++              
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIAL-------LTKMKDEGIQP------------- 439

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
                          +  YTI + GLC+ G++K+A NIF  L+     +T  +   +I G
Sbjct: 440 --------------DMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
            C     D A+ +      NG I   +    ++ S LF KD
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS-LFEKD 525



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 188/337 (55%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  KVG    AL+   ++     QP+V +YN +++   + +L   A  +Y EMV   
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT+S LI+G    GK   AI + ++M    I P+ +T++I++ G C+  R  EA 
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M   G  PD V Y +L++G+C +++V++A ++  +  + G    + SY+ +I+G 
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K+ DEA   +++M  + I PDVV Y  +I GL ++GK+  A+KL+ +M +RG+  D 
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN+++   C    +D+A +L  ++      P+ +T+TILI G+C+ G + DAQ +F  
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +   G   +V  +  +I G C     +KA  L  KME
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 237/494 (47%), Gaps = 15/494 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L+K N +        E+    ++     F +LI+ + ++G    +   F  + +  
Sbjct: 62  ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+      ++     K     AL  + ++V L    N V +  LINGL K G+T  A+
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAAL 181

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L  +  + + PN   Y  +I  +C++   +EA+ L+ +M   G SPD V Y+AL++GF
Sbjct: 182 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C L ++++A+ L      +   P + ++S L+DG  +  R  EA      M ++ I+PDV
Sbjct: 242 CILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDV 301

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++ G     +V  A  + + M + G+  +   YN +I GFC +  +D+A +L  E
Sbjct: 302 VTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKE 361

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  ++ +P+  T+  LI G+C++G +  A KL ++M   G       +N+++D LCK  +
Sbjct: 362 MHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 421

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++KA  L  KM + G  P ++              +   +++  C  G +  A  I   L
Sbjct: 422 VDKAIALLTKMKDEGIQPDMY--------------TYTILIDGLCKGGRLKDAQNIFEDL 467

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G    + TY  +I GFC     + AL L  +++  G  P++ TY  +I  L   D  
Sbjct: 468 LVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDEN 527

Query: 548 EDAFRIFGQMPQNG 561
           + A ++  +M   G
Sbjct: 528 DMAEKLLREMIARG 541



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 207/482 (42%), Gaps = 61/482 (12%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEA--YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           P+    + L   L    + DE    + + ++      P +  +G ++  L +    + A+
Sbjct: 17  PKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAI 76

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L  +M   GI  D   +N LI  F  LG    + S+   I K+   PN  T T LI G+
Sbjct: 77  SLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGL 136

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK--NPT 446
           C  G +  A    +K+   G   +   +  LI+GLCK G+   A  L  +++ GK   P 
Sbjct: 137 CLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVD-GKLVQPN 195

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           + +                T+++  C   L+++A+ +  ++   G  PD++TY++LI+GF
Sbjct: 196 VVM--------------YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C +G +N A+ LF ++  + + PD  T+  L++G  +  R ++A  +   M + G  P  
Sbjct: 242 CILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDV 301

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
             Y SLM   C  ++ + A                   KSI   + +G V   +Q     
Sbjct: 302 VTYCSLMDGYCLVKQVNKA-------------------KSIFNTMAQGGVTANVQS---- 338

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKR 683
                      Y I + G C+  +V EA+N+F  +  CK I+  P  V    LI GLCK 
Sbjct: 339 -----------YNIMINGFCKIKKVDEAMNLFKEM-HCKNII--PDVVTYNSLIDGLCKS 384

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
           G +  A+ +       G        N +L +L   K+++   A  LL +MK  G   D  
Sbjct: 385 GKISYALKLVDEMHDRGVPHDKITYNSILDAL--CKNHQVDKAIALLTKMKDEGIQPDMY 442

Query: 744 LY 745
            Y
Sbjct: 443 TY 444



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 124/237 (52%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V    KA   F  M +     +V  YN ++N   + +    A+ ++ EM   N
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P++VT++ LI+GL KSGK   A+K++DEM  RG+  +K TY  ++  LC+ ++ D+A 
Sbjct: 367 IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 426

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  KMKD G  PD   Y  L++G CK  R+ +A  +       G+   + +Y+ +I G 
Sbjct: 427 ALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGF 486

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                +D+A A   KM +    P+   Y ++I  L E  +   A KLL +M  RG++
Sbjct: 487 CDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 2/195 (1%)

Query: 95  SVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           +++ DV  +  LI G  K G    AL+   +M +     D   YN++L+   +      A
Sbjct: 366 NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +A+  +M      P++ T+++LI+GL K G+ + A  + +++  +G     +TYT++I G
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C  +  D+A  L  KM+D+GC P+   Y  ++    +    D A  LLR     G +  
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFG 545

Query: 273 LGSYSCLIDGLFRAK 287
                CL    F+ +
Sbjct: 546 WKKAYCLFTRFFQRR 560


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 244/496 (49%), Gaps = 14/496 (2%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D+Y  N ++N   R++    A +   ++ KL   PN VTF+ L+NGL   G+   A++++
Sbjct: 124 DLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           D M     +P+  T   +++GLC  +R  EA  L  +M  +GC P+   Y  +LN  CK 
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
                AL LLR  E     P + +Y+ +ID L +  R D+A +++ +M  + I+ +V  Y
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             +I      G+  D  +LL DM  R I P+   ++ALI      G L +A+ L  E+  
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R   PNT T+  LI G+C +  +D+A ++ + M   GC P +  +N LI+G CKA +++ 
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
              LF KM +                + D  +  T+++ +C +  +  A K+  ++   G
Sbjct: 424 GMRLFRKMSL-------------RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P I+TY  L++G C  G +  AL +  ++    +  D   Y  +I+G+   ++ +DA+
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
            +F  +P  G       Y  +++  C+R   S A +L+ +   D    D  +  + I   
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAH 590

Query: 611 LQKGEVENAIQGLLEM 626
           L+  ++  ++Q + EM
Sbjct: 591 LRGNDITTSVQLIEEM 606



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 241/537 (44%), Gaps = 19/537 (3%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SGL  I + D+A  LF  M  S   P  + +N L     + ++ D  LAL +  E  G  
Sbjct: 64  SGLVDIKK-DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIA 122

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             L + + +I+   R ++   A++   K+F+   EP+ V +  ++ GL   G+V +A++L
Sbjct: 123 YDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVEL 182

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M     VPD    N ++ G C    + +A  L   +      PN  T+  ++  MC+
Sbjct: 183 VDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCK 242

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFL 449
           +G    A  L  KME     P V  +  +ID LCK G L+ A   F +ME  G    +F 
Sbjct: 243 SGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF- 301

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  +++  +C+ G      ++L  +      P+++T+++LI+   K 
Sbjct: 302 -------------TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKE 348

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A  L+ E+  +G+ P+++TY +LI GL    R ++A ++   M   GC P    Y
Sbjct: 349 GKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTY 408

Query: 570 KSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
             L+   C+ ++      L+ +  LR +          I+ F Q  ++  A +   EM  
Sbjct: 409 NILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVS 468

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
           +     +  Y I L GLC +G+++EAL I   + +CK  +       +IHG+C    +D 
Sbjct: 469 QGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDD 528

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           A  +F      G     +  N +L  L   K +    A  L  +MK  GY+ D C Y
Sbjct: 529 AWSLFCSLPSKGVKRDIQSYNIMLSGL--CKRSSLSEADALFRKMKEDGYEPDGCTY 583



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 17/382 (4%)

Query: 75  KPNGFDLYWQTLDEL-RSGNVSVVSDV---------------FFVLISGYYKVGDCEKAL 118
           +PN F  Y   L+ + +SGN +   D+               + ++I    K G  + AL
Sbjct: 227 QPNQF-TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
             F +M+    + +V+ YN+++        +     +  +M+     PN+VTFS LI+ L
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSL 345

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K GK   A  + +EM  RGI PN  TY  +I GLC   R DEA ++   M   GC PD 
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             YN L+NGFCK ++VD+ + L R     G +    +YS LI G  ++++   A   +++
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  + + P ++ Y +++ GL + G++++A+ +L  M +  +  D   YN +I G C+   
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANK 525

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +D A SL   +  +    +  ++ I++ G+C+   + +A  LF KM++ G  P    +N 
Sbjct: 526 VDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNT 585

Query: 419 LIDGLCKAGELEKANLLFYKME 440
           LI    +  ++  +  L  +M+
Sbjct: 586 LIRAHLRGNDITTSVQLIEEMK 607



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 180/395 (45%), Gaps = 1/395 (0%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+ N             RK      + + +I  L K    D       E+ +  +     
Sbjct: 242 KSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVF 301

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI  +   G  +   +    M      P+V  ++A+++   ++     A  +Y EM
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PN +T++ LI GL    + + A +M+D M  +G  P+ +TY I+I+G C+  + 
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+  RLF KM   G   D V Y+ L+ GFC+ R++  A  + +     G  P + +Y+ L
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL      +EA     +M + K+E D+ +Y ++I G+  A KV DA  L   +  +G+
Sbjct: 482 LDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YN ++ G C    L +A +L  ++ +    P+  T+  LI    R   +  + +
Sbjct: 542 KRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQ 601

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           L  +M++ G          ++D L  +GEL+K+ L
Sbjct: 602 LIEEMKRCGFSSDASTVKIVMDML-SSGELDKSFL 635



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 113/233 (48%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI+G+ K    +  +  F KM       D   Y+ ++    + +  ++A  V+ EM
Sbjct: 407 TYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEM 466

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P I+T+++L++GL  +G+ E A+ +LD+M +  +  +   Y I+I G+C  N+ 
Sbjct: 467 VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKV 526

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A+ LF  +   G   D  +YN +L+G CK   + EA AL R  ++DG+ P   +Y+ L
Sbjct: 527 DDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTL 586

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           I    R      +     +M       D     +++  LS     K  + +LS
Sbjct: 587 IRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLS 639



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 66/382 (17%)

Query: 390 RNGMVD----DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
           R+G+VD    DA  LF  M ++   P+V  FN L   L +  + +    L  +ME+    
Sbjct: 63  RSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELK--- 119

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                        +D  +L  M+  +C    +  A+  + ++ + G  P+ +T+N+L+NG
Sbjct: 120 ----------GIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNG 169

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C  G +  A++L   + L    PD +T  T++NGL   DR  +A  +  +M  NGC P+
Sbjct: 170 LCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPN 229

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y  ++   C+                                   G   +A+  L +
Sbjct: 230 QFTYGPILNRMCK----------------------------------SGNTASALDLLRK 255

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI-VTPPSCVKLIHGLCKRG 684
           M+ +     +  YTI +  LC+DG++ +AL+ FS + E K I     +   LI   C  G
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM-ETKGIKANVFTYNSLIGSFCSFG 314

Query: 685 YLDLAMDVF--LYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDL 740
             D    +   + T K    + P V  +  L+ SL+  K+ K   A  L   M + G + 
Sbjct: 315 RWDDGAQLLRDMITRK----ITPNVVTFSALIDSLV--KEGKLTEAKDLYNEMITRGIEP 368

Query: 741 DACLYPKTKSLLPGPWNTREME 762
           +   Y    SL+ G  N + ++
Sbjct: 369 NTITY---NSLIYGLCNDKRLD 387


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 246/504 (48%), Gaps = 20/504 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+SG  K+    +    + +M+     PD    N +LN           LAV   ++
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   +P+IVT++ LI GL    +   A  +   M + G  PN  TY  ++ GLC+     
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 221 EAYRLFLKM-KDSGC-----SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
            A +L  +M  DS        P  ++Y+ +++  CK RR DEA  L    +  G  P + 
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SY+ LI G     +++EA   + +M  + ++P+VV + V+I  L + GKV +A  LL  M
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            +RGIVP+   YN+LI+GFC +G L+ AR L V +  +   P+   +T+LI G C+   V
Sbjct: 339 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 398

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           ++A KL+N M + G  P V  + AL+ GL + G++  A  LF  M++   P         
Sbjct: 399 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG-------- 450

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D       +   C  G + +A ++  +L       DI  +N LI+G CK G +  
Sbjct: 451 -----DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 505

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +LF++L  + L+PD VTY  +I+   R  +   A  +F +M +NGCTP    Y +L+ 
Sbjct: 506 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 565

Query: 575 WSCRRRKFSLAFS-LWLQYLRDIS 597
                +K       L +   RD+S
Sbjct: 566 GFFESKKLEKVVELLHMMVQRDVS 589



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 228/470 (48%), Gaps = 30/470 (6%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   ++T ++SGL +I    + + L+ +M+ SG SPD    N LLN  C + RV E LA+
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +    + G++P + +Y+ LI GL    R  +A   + +M +    P+ + YG +++GL  
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 321 AGKVKDAMKL----LSDMRERGI--VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
            G +  A+KL    L+D    GI   P    Y+ +I   C     D+AR L  E+  +  
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKAN 433
            P   ++T LI G C  G  ++A++LFN+M   G  P+V  FN LID LCK G+ +E  +
Sbjct: 274 TPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 333

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LL   ++ G  P L               +  +++E +C  G ++ A ++ + +   G  
Sbjct: 334 LLEVMIQRGIVPNLL--------------TYNSLIEGFCLVGDLNSARELFVSMPSKGCE 379

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD+I Y  LING+CK   +  A+KL+  +   G RPD  TYG L+ GL +  +  DA ++
Sbjct: 380 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 439

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
           FG M   G      +Y   +   C+      A  L+ +        D E     I+   +
Sbjct: 440 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 499

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIF 658
            G++E A     E+  KL   +L P    Y I +   C+ GQV +A  +F
Sbjct: 500 AGKLETA----WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 545



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 248/552 (44%), Gaps = 58/552 (10%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A +A++ F  M  S  +P   ++  LL+G  K++   +   L       G  P   + + 
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++ L    R  E  A    +      PD+V Y  +I+GL    ++  A  L + M++ G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL------PNTHTFTILICGMCRNG 392
             P+   Y  L+KG C  G +  A  L  E+    SL      P   +++I+I  +C++ 
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
             D+A+ LF +M+  G  P+V  + +LI G C  G+ E+A  LF +M           ++
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM-----------VN 305

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           QG     +  +   +++  C  G + +A  +L  + + G +P+++TYNSLI GFC VG++
Sbjct: 306 QGVQP--NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           N A +LF  +  KG  PD + Y  LING  +  + E+A +++  M Q G  P    Y +L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +T                                     Q G+V +A +    M      
Sbjct: 424 LTG----------------------------------LFQGGKVGDAKKLFGVMKVYGIP 449

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             L  Y I+L GLC++G + EA+ +F+ L      +       LI GLCK G L+ A ++
Sbjct: 450 GDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWEL 509

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           F    +    L+P V  Y +    F +  + V A  L  +M+  G   D   Y    +L+
Sbjct: 510 FEKLPQEE--LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY---ATLI 564

Query: 753 PGPWNTREMENM 764
            G + ++++E +
Sbjct: 565 RGFFESKKLEKV 576



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 154/344 (44%), Gaps = 35/344 (10%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I  L K    D      +E++   ++     +  LI G+   G  E+A   F +M
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                QP+V  +N ++++  ++   + A  +   M++   +PN++T++ LI G    G  
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++   M  +G  P+   YT++I+G C+ ++ +EA +L+  M   G  PD   Y AL
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 245 -----------------------------------LNGFCKLRRVDEALALLRSFEKDGF 269
                                              LNG CK   + EA+ L    +    
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              +  ++CLIDGL +A + + A+  + K+ +E+++PDVV Y +MI      G+V  A  
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           L   M + G  PD   Y  LI+GF +   L++   L   + +RD
Sbjct: 544 LFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 587



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+  VGD   A E F  M    C+PDV  Y  ++N   +      A+ +Y  M+++ 
Sbjct: 353 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 412

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++ T+  L+ GL + GK   A K+   M   GI  + + Y I ++GLC+     EA 
Sbjct: 413 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 472

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF K+K      D   +N L++G CK  +++ A  L     ++   P + +Y+ +I   
Sbjct: 473 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 532

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            R  +  +A   ++KM +    PD + Y  +IRG  E+ K++  ++LL  M +R +  D
Sbjct: 533 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  ++L+S N+ +  + F  LI G  K G  E A E F K+ + + QPDV  YN +++  
Sbjct: 473 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 532

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
            R    + A  ++ +M K  C P+ +T++ LI G  +S K E  +++L  M QR +
Sbjct: 533 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 588


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 249/489 (50%), Gaps = 21/489 (4%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNI 142
           + L  +R  N  ++   F V+   Y K    EKA++ F +M  EF C+  V  +N+VLN+
Sbjct: 98  KLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNV 157

Query: 143 AFRKQLFLLALAVYYEMVK----LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
              + L+   L  Y  +V     +N  PN ++F+L+I  L K G  + AI++   M ++ 
Sbjct: 158 IINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK 217

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
            LP+ +TY  ++ GLC+  R DEA  L  +M+  GCSP  V YN L++G CK   +    
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVT 277

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L+ +    G  P   +Y+ LI GL    + D+A +   +M   K  P+ V YG +I GL
Sbjct: 278 KLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGL 337

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +  +  D  +LL  M ERG   + + Y+ LI G    G  ++A +L  ++ ++   PN 
Sbjct: 338 VKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNI 397

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             ++ +I G+CR G  ++A+++ N M  +GC P+V  +++L+ G  K G  E+A  ++ +
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M+             G +R  ++     +++  C  G + +A  +  ++   G  PD + 
Sbjct: 458 MD-----------ETGCSR--NEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504

Query: 499 YNSLINGFCKVGNINGALKLFKEL---QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           Y+S+I G C +G+++ ALKL+ E+   +    +PD VTY  L++GL        A  +  
Sbjct: 505 YSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLN 564

Query: 556 QMPQNGCTP 564
            M   GC P
Sbjct: 565 CMLDRGCDP 573



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 240/487 (49%), Gaps = 46/487 (9%)

Query: 57  RKRLRSFASN-SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           ++ ++SF S  + +I+  L   G + Y   ++   + N+S     F ++I    K+G  +
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVD 204

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A+E F  M E  C PD Y Y  +++   +++    A+ +  EM    C P+ V +++LI
Sbjct: 205 RAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL K G      K++D M  +G  PN+ TY  +I GLC   + D+A  L  +M  S C 
Sbjct: 265 DGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V Y  L+NG  K RR  +   LL S E+ G+      YS LI GLF+  + +EA   
Sbjct: 325 PNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTL 384

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           ++KM E+   P++V+Y  +I GL   GK  +A ++L+ M   G +P+ Y Y++L+KGF  
Sbjct: 385 WKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFK 444

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            GL ++A  +  E+ +     N   +++LI G+C  G V +A  +++KM   G  P    
Sbjct: 445 TGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           ++++I GLC  G ++ A  L+++M   + P      SQ                      
Sbjct: 505 YSSMIKGLCGIGSMDAALKLYHEMLCQEEPK-----SQ---------------------- 537

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
                             PD++TYN L++G C   +++ A+ L   +  +G  PD +T  
Sbjct: 538 ------------------PDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCN 579

Query: 536 TLINGLQ 542
           T +N L 
Sbjct: 580 TFLNTLS 586



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 177/360 (49%), Gaps = 15/360 (4%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP+ +++N ++   CKL  VD A+ + R   +   +P   +Y  L+DGL + +R DEA  
Sbjct: 184 SPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVL 243

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M  E   P  V+Y V+I GL + G +    KL+ +M  +G  P+   YN LI G C
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLC 303

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G LD+A SL   +     +PN  T+  LI G+ +     D  +L   ME+ G   +  
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQH 363

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
           +++ LI GL K G+ E+A  L+ KM E G  P + +                 +++  C 
Sbjct: 364 IYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVV--------------YSAVIDGLCR 409

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G  ++A +IL  +  SG LP++ TY+SL+ GF K G    A+++++E+   G   +   
Sbjct: 410 EGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFC 469

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI+GL  V R ++A  ++ +M   G  P    Y S++   C       A  L+ + L
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 187/446 (41%), Gaps = 95/446 (21%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C LG +D+A  +   + ++  LP+ +T+  L+ G+C+   +D+A 
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  GC PS  ++N LIDGL                                   
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGL----------------------------------- 267

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                        C  G + +  K++  +   G  P+ +TYN+LI+G C  G ++ A+ L
Sbjct: 268 -------------CKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSL 314

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDR-------------------------------- 546
            + +      P+ VTYGTLINGL +  R                                
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFK 374

Query: 547 ---EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               E+A  ++ +M + GC P+  VY +++   CR  K + A  +    +      +  +
Sbjct: 375 EGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYT 434

Query: 604 MKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
             S+ + F + G  E AIQ   EMD          Y++ + GLC  G+VKEA+ ++S ++
Sbjct: 435 YSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKML 494

Query: 663 ECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL-KNGFILRPRVCNY--LLRSLL 716
               I   P  V    +I GLC  G +D A+ ++   L +     +P V  Y  LL  L 
Sbjct: 495 ---TIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
             KD  +  A  LL  M   G D D 
Sbjct: 552 MQKDVSR--AVDLLNCMLDRGCDPDV 575



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/295 (19%), Positives = 112/295 (37%), Gaps = 41/295 (13%)

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKVGNING 514
           NRV  + S   +   Y  A L  KA  +  ++ +       + ++NS++N     G  + 
Sbjct: 107 NRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHR 166

Query: 515 ALKLFKELQLKGLR----PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            L+ +  +    +     P+ +++  +I  L ++   + A  +F  MP+  C P    Y 
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYC 226

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +LM   C+                    R DE++  ++E   +G   + +          
Sbjct: 227 TLMDGLCKEE------------------RIDEAVLLLDEMQSEGCSPSPVI--------- 259

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y + + GLC+ G +     +   +          +   LIHGLC +G LD A+
Sbjct: 260 -------YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +    + +  I        L+  L+  K  + +    LL  M+  GY L+  +Y
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLV--KQRRAMDGARLLISMEERGYRLNQHIY 365


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 249/539 (46%), Gaps = 58/539 (10%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV+  C  N+VTF+ L+NGL + G+   A+ ++D M + G  P+  TY  +++G+C++  
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A  +  KM +S    + V Y+A+++  CK     +A  +     + G  P + +Y+C
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG     ++ +A    R M E  I+PDVV +  +I    + GKV  A +L  +M  R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN------- 391
           I P T  Y+++I GFC    L+ A+ +   +  +   P+  T   LI G CR        
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 392 ----GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
               G V+ AQ LF +M   G  P +   N L+ GLC+ G+LEKA  +F           
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF----------- 289

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
             ++ Q      D A+   ++   C    + +A+ +   L  +G   D++TYN LI  F 
Sbjct: 290 --KVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFV 347

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN   A  ++ E+  KG+ P +VTY ++++G  + +R E+A ++   M   GC+P   
Sbjct: 348 KEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVV 407

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            + +L+   C+                  +GR D+ ++   E  Q+G V + I       
Sbjct: 408 TFSTLIKGYCK------------------AGRVDDGLELFSEMCQRGLVADTI------- 442

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
                     Y   + G C+ G +  A +IF  +V         +   ++ GLC +  L
Sbjct: 443 ---------TYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAEL 492



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 243/508 (47%), Gaps = 38/508 (7%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M + G   N  T+T +++GLC+  R  +A  L  +M + G  PD V Y  ++NG CKL  
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
              AL +LR  ++      +  YS ++D L +   + +A   + +M E+ I P+V+ Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           MI G    GK  DA +LL DM ER I PD   ++ALI  F   G +  A  L  E+ +R+
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P T T++ +I G C++  ++DA+ +F+ M   GC P +   N LIDG C+A       
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAK------ 234

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                                          + ++  +C  G ++ A  +  ++  +G  
Sbjct: 235 -------------------------------RHLIHGFCQVGNVNVAQDLFQEMISNGVS 263

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PDI+T N+L+ G C+ G +  AL++FK  Q   +  D+ T   +ING+ + ++ ++A+ +
Sbjct: 264 PDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDL 323

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQ 612
           F  +P NG       Y  L+    +   F  A  ++L+ L + I          ++ F +
Sbjct: 324 FNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCK 383

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           +  +E A Q +  M  +     +  ++  + G C+ G+V + L +FS + +   +    +
Sbjct: 384 QNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTIT 443

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
              LIHG CK G L+ A D+F   + +G
Sbjct: 444 YNALIHGFCKVGDLNGAQDIFEEMVSSG 471



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 238/516 (46%), Gaps = 26/516 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G  + G   +AL    +M E   QPD   Y  ++N   +    + AL +  +M
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     N+V +S +++ L K G    A  +  EM ++GI PN  TY  +I G C   + 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A +L   M +    PD V ++AL+N F K  +V  A  L R   +    P   +YS +
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI-----------RGLSEAGKVKDAM 328
           IDG  +  R ++A   +  M  +   PD++    +I            G  + G V  A 
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L  +M   G+ PD    N L+ G C+ G L++A  +     K     +T T  I+I GM
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   VD+A  LFN +   G    V  +N LI    K G   +A  ++ +M         
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM--------- 362

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             L +G   +    +  +MV+ +C    + +A +++  +   G  PD++T+++LI G+CK
Sbjct: 363 --LCKG--IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCK 418

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++  L+LF E+  +GL  D++TY  LI+G  +V     A  IF +M  +G  P    
Sbjct: 419 AGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTIT 478

Query: 569 YKSLMTWSCRRRKFSLAFSLW--LQYLRDISGRDDE 602
           ++S++   C + +     ++   LQ   D    DDE
Sbjct: 479 FRSMLAGLCTKAELQKGLTMLEDLQKSVDHELEDDE 514



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 19/356 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I+  +K        +   E+   N+   +  +  +I G+ K    E A   F  M  
Sbjct: 154 SALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVS 213

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLL-----------ALAVYYEMVKLNCLPNIVTFSLLI 175
             C PD+   N +++   R +  L+           A  ++ EM+     P+IVT + L+
Sbjct: 214 KGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLL 273

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL ++GK E A++M     +  +  +  T  I+I+G+C+ N+ DEA+ LF  +  +G  
Sbjct: 274 AGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVE 333

Query: 236 PDFVAYNALLNGFCK----LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            D V YN L+  F K    LR  D  L +L      G +P   +Y+ ++DG  +  R +E
Sbjct: 334 TDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK----GIIPSTVTYNSMVDGFCKQNRLEE 389

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A      M  E   PDVV +  +I+G  +AG+V D ++L S+M +RG+V DT  YNALI 
Sbjct: 390 ARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIH 449

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           GFC +G L+ A+ +  E+      P+T TF  ++ G+C    +     +   ++K+
Sbjct: 450 GFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 176/412 (42%), Gaps = 46/412 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA++  L K            E+    +      +  +I GY   G    A +    M E
Sbjct: 84  SAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIE 143

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  PDV  ++A++N   ++     A  +Y EM++ N  P  +T+S +I+G  K  + E 
Sbjct: 144 RNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLED 203

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISG-----------LCQINRADEAYRLFLKMKDSGCS 235
           A  M D M  +G  P+  T   +I G            CQ+   + A  LF +M  +G S
Sbjct: 204 AKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVS 263

Query: 236 PDFVAYNALL-----------------------------------NGFCKLRRVDEALAL 260
           PD V  N LL                                   NG CK  +VDEA  L
Sbjct: 264 PDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDL 323

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
             S   +G    + +Y+ LI    +   +  A   Y +M  + I P  V Y  M+ G  +
Sbjct: 324 FNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCK 383

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++++A +++  M   G  PD   ++ LIKG+C  G +D    L  E+ +R  + +T T
Sbjct: 384 QNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTIT 443

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           +  LI G C+ G ++ AQ +F +M  +G  P    F +++ GLC   EL+K 
Sbjct: 444 YNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 3/219 (1%)

Query: 48  FRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           F+ F    K K     A+ + +I+ + K N  D  W   + L    V      + +LI  
Sbjct: 289 FKVF---QKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + K G+  +A + + +M      P    YN++++   ++     A  +   MV   C P+
Sbjct: 346 FVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPD 405

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +VTFS LI G  K+G+ +  +++  EM QRG++ +  TY  +I G C++   + A  +F 
Sbjct: 406 VVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFE 465

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           +M  SG  PD + + ++L G C    + + L +L   +K
Sbjct: 466 EMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 166/590 (28%), Positives = 280/590 (47%), Gaps = 22/590 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+  +   G    AL +  KM+ F   PD   YN +LN   RK +   A  +   M
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   +P   T++ L++  ++ G  + A  +++ MT  G  P+ +TY ++ +GLCQ  + 
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 330

Query: 220 DEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           DEA++L  +M+  G  SPD V YN L++   K +R  +AL LL    + G    L +++ 
Sbjct: 331 DEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++ GL R  + +EA      M EE + PDV+ Y  +I    +AG V  A  L+ +M   G
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  DT+  N L+   C     ++A  L     +R  +P+  ++  ++    +    + A 
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNR 457
            L+++M K    PS+  +N LI GL   G+L +A + L   ME+G  P            
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVP------------ 558

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   ++  YC  G + KA++   ++ E+   PD++T N+L+NG C  G +  A+K
Sbjct: 559 --DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMK 616

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+    KG + D +TY TLI  L + +  + A R F  M   G  P    Y  L++ + 
Sbjct: 617 LFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLS-AL 675

Query: 578 RRRKFSLAFSLWLQYLRD---ISGR-DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
                S+     L  L +   + GR    S+KS  E ++ G+       +  +     D 
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           Q + Y  ++  LC  GQ+KEA  +   +++    V   + + L+ GL KR
Sbjct: 736 QES-YNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKR 784



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 160/627 (25%), Positives = 272/627 (43%), Gaps = 59/627 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKT--EVA 187
           P   + +A L+   R +L  LA  + +   +  C+ P++   + +++ L++S  T  + +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +     +    + PN +T+ +++   C      +A     KM+  G SPD V YN LLN 
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+   + EA  LL   +K+G VP   +Y+ L+    R     +A      M     EPD
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPD 313

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  Y V+  GL +AGKV +A KL  +M + GIV PD   YN L+           A +L 
Sbjct: 314 LWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLL 373

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++    +  T  I++ G+CR G +++A      M + G  P V  +N LID  CKA
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKA 433

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G + KA +L  +M             + G ++ D  +L T++   C      +A ++L  
Sbjct: 434 GNVAKAFVLMDEM------------VRSGLKM-DTFTLNTLLYNLCKEKRYEEAEELLRA 480

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
             + G +PD ++Y +++  + K      AL L+ E+  + L P   TY TLI GL  + +
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             +A     ++ + G  P    Y  ++   C+                            
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCK---------------------------- 572

Query: 607 IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                 +G++E A Q    ++E  FK +   +      + GLC  G++++A+ +F   VE
Sbjct: 573 ------EGDLEKAFQFHNKMVENSFKPD---VVTCNTLMNGLCLYGRLEKAMKLFESWVE 623

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
               V   +   LI  LCK   +D A+  F      G  L+P V  Y +     S+  + 
Sbjct: 624 KGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG--LQPDVFTYNVLLSALSEAGRS 681

Query: 724 VHAYHLLCRMKSVGYDLDACLYPKTKS 750
           V A  +L ++   G       YP  KS
Sbjct: 682 VEAQKMLHKLNESGKLYGRFFYPSIKS 708



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 214/484 (44%), Gaps = 22/484 (4%)

Query: 73  LLKPNGFDLYWQTLDELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           L +    D  ++  DE+   G VS     +  L+   +K      AL    +M+E   + 
Sbjct: 324 LCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKS 383

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
            +  +N ++    R+     AL     M +    P+++T++ LI+   K+G    A  ++
Sbjct: 384 SLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLM 443

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           DEM + G+  + FT   ++  LC+  R +EA  L       G  PD V+Y  ++  + K 
Sbjct: 444 DEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKE 503

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            + + AL L     K    P + +Y+ LI GL    +  EA     ++ E  + PD   Y
Sbjct: 504 YKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTY 563

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW- 370
            ++I    + G ++ A +  + M E    PD    N L+ G C  G L++A  L  E W 
Sbjct: 564 NIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKL-FESWV 622

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           ++    +  T+  LI  +C++  VD A + F  ME  G  P V  +N L+  L +AG   
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSV 682

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A  + +K+ E GK   L+ R            S+++ VE   T     K  ++   +  
Sbjct: 683 EAQKMLHKLNESGK---LYGRFFY--------PSIKSSVEAVETG----KDPEVKSDIES 727

Query: 490 SGNLP--DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL-QRVDR 546
            GN    D  +YN  I   C  G +  A  +  E+  KG+  D+ TY TL+ GL +R  R
Sbjct: 728 VGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKR 787

Query: 547 EEDA 550
           +  A
Sbjct: 788 QTHA 791


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 253/504 (50%), Gaps = 31/504 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  + K G  + AL   GKM E   +  VY Y+++++   +      A +++ EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PN+V ++ LI+G  K G+   A ++  EMT +GI PN +T+T +ISGLC  NR 
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +LF +M +    P+ V YN L+ G CK      A  LL    + G VP   +Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL    R  EA  +   +  E+ + + + +  ++ G  + G++ DA+    +M  RG+
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS----LPNTHTFTILICGMCRNGMVD 395
             D  CY+ LI G     L  Q R   +++ K+       P+   +T +I    + G + 
Sbjct: 632 AMDLVCYSVLIYGI----LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP-------TLF 448
            A  L++ M   GC P+V  + ALI+GLCK G ++KA LL  +M +  N          F
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREM-LASNSLPNQNTYACF 746

Query: 449 LR-LSQGGN-----RVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           L  L+  GN     ++HD           +   ++  +C  G I +A ++L+ + +SG  
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 806

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD I+Y+++I  +C+ G++  A+KL++ +  +G+ PD+V Y  LI G         AF +
Sbjct: 807 PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL 866

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSC 577
              M + G  P+ A Y SL+  +C
Sbjct: 867 RDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 232/456 (50%), Gaps = 16/456 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ +  +     ++  LISGY K G+   A   + +M      P+ Y + A+++    
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A  ++ EMV+ N +PN VT+++LI G  K G T  A ++LDEM ++G++P+ +T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +ISGLC   R  EA      ++      + + ++ALL+G+CK  R+D+AL   R   
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G    L  YS LI G+ R +         ++M ++ + PD VLY  MI   ++AG +K
Sbjct: 628 GRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A  L   M   G +P+   Y ALI G C +GL+D+A  L  E+   +SLPN +T+   +
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 747

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKN 444
             +   G ++ A +L + + + G   +   +N LI G CK G + E A +L   ++ G +
Sbjct: 748 DYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 806

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  S  T++ +YC  G + +A K+   +   G  PD + YN LI 
Sbjct: 807 P--------------DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 852

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           G C  G +  A +L  ++  +G++P+  TY +LI+G
Sbjct: 853 GCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 181/709 (25%), Positives = 314/709 (44%), Gaps = 83/709 (11%)

Query: 28  FLSKT----TVTSVIMKT-KNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDL 81
           F+S+T     V  V+++T  + ++  RFF +    K    S  S   +I  L++ N   L
Sbjct: 52  FISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSN---L 108

Query: 82  YWQTLDELRSGNVSVVS--DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           YW     L++  +  ++   +F   +  Y K         +F     FD     Y+ N  
Sbjct: 109 YWPASSLLQTLLLRGLNPEGLFESFLDSYRKC--------NFSTTLGFDLLIQTYVQN-- 158

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
                R++L    L V   M+    LP I T S ++NGL +  +  +A+ + DE+   G+
Sbjct: 159 -----RRELD--GLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGL 211

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            P+ + YT V+  LC++     A  +  +M+ SGC      YN  + G CK +RV EA+ 
Sbjct: 212 RPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVE 271

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +       G    +G+Y  L+ GL + + ++       +M E    P       ++ GL 
Sbjct: 272 IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLR 331

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G +  A  L++ +++ G+ P  + YNALI   C  G LD+A SL   +  +   PN  
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T++ILI   C+ G +D A     KM + G   +V  +++LI G CK G+L  A  LF +M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
              G  P + +  S              ++  YC  G +H A+++  ++   G  P+  T
Sbjct: 452 IANGLKPNVVIYTS--------------LISGYCKEGELHNAFRLYHEMTGKGISPNTYT 497

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           + +LI+G C    +  A KLF E+    + P+ VTY  LI G  +      AF +  +M 
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFS------------------LAFSLWLQ-YLRDISGR 599
           + G  P    Y+ L++  C   + S                  + FS  L  Y ++  GR
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE--GR 615

Query: 600 DDESMKSIEEFLQKGEVENAI---------------QGLLEMDFKLNDFQLAP----YTI 640
            D+++ +  E L +G   + +               + ++++  +++D  L P    YT 
Sbjct: 616 LDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTT 675

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            +    + G +K A  ++ ++V    +    +   LI+GLCK G +D A
Sbjct: 676 MIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 165/670 (24%), Positives = 297/670 (44%), Gaps = 89/670 (13%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +++G  ++     AL  F ++     +PDVY+Y AV+      + F+ A  V   M    
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  ++ T+++ I GL K+ +   A+++ + ++ +G+  +  TY  ++ GLC++   +   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  +M + G  P   A + L++G  K   +  A  L+   +K G  P L  Y+ LI+ +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  + DEA + +  M  + + P+ V Y ++I    + GK+  A+  L  M E GI    
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y++LI G C LG L  A+SL  E+      PN   +T LI G C+ G + +A +L+++
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M   G  P+   F ALI GLC A  + +AN LF +M                N + ++ +
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM-------------VEWNVIPNEVT 532

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY------------------------ 499
              ++E +C  G   +A+++L ++ E G +PD  TY                        
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592

Query: 500 -----------NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
                      ++L++G+CK G ++ AL   +E+  +G+  D V Y  LI G+ R     
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDI 596
               +  QM   G  P   +Y +++  + +     +AF LW            + Y   I
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712

Query: 597 S-----GRDDESMKSIEEFLQKGEVEN-----------AIQGLLEMDFKLNDFQL----- 635
           +     G  D++     E L    + N             +G +E   +L+D  L     
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA 772

Query: 636 --APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAM 690
               Y I + G C+ G+++EA  +   +++       P C+    +I+  C+RG L  A+
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG---ISPDCISYSTIIYEYCRRGDLKEAI 829

Query: 691 DVFLYTLKNG 700
            ++   L  G
Sbjct: 830 KLWESMLNRG 839



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 1/288 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA++    K    D       E+    V++    + VLI G  +  D    ++   +M +
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD  +Y  +++   +     +A  ++  MV   CLPN+VT++ LINGL K G  + 
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  EM     LPN+ TY   +  L      ++A +L   + + G   + V YN L+ 
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 782

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCKL R+ EA  +L +    G  P   SYS +I    R     EA   +  M    + P
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           D V Y  +I G    G++  A +L  DM  RG+ P+   YN+LI G C
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 234/473 (49%), Gaps = 28/473 (5%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E   K L++M  RG +P+    T +I GLC+  +  +A R+   ++DSG  PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + YN L++G+CK   +  AL LL   ++    P + +Y+ ++  L  + +  EA     
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLL---DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + +  PDV+ Y ++I    +   V  AMKLL +MR++G  PD   YN LI G C  G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A      +      PN  T  I++  MC  G   DA+K   +M + GC PSV  FN
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--------------FLRLSQGG 455
            LI+ LC+ G + +A  +  KM         +  NP L              +L +    
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  T++   C  G +  A +IL QL   G  P +ITYN++I+G  KVG  + A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +KL  E++ KGL+PD +TY TL+ GL R  + ++A   F  + + G  P+   Y S+M  
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536

Query: 576 SCRRRKFSLAFSLWLQYL--RDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
            C+ R+   A   +L Y+  R     +   M  IE    +G  + A++ L E+
Sbjct: 537 LCKARQTVRAID-FLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 222/470 (47%), Gaps = 51/470 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  K G   KA      +++    PDV  YN +++   +      AL +   + +++
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMS 207

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ ++  L  SGK + A+++LD   QR   P+  TYTI+I   C+ +   +A 
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M+D GC PD V YN L+NG CK  R+DEA+  L      G  P + +++ ++  +
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R+ +A  +  +M  +   P VV + ++I  L   G +  A+ +L  M + G  P++
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+   C    +++A      +  R   P+  T+  L+  +C++G VD A ++ N+
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           +   GC P +  +N +IDGL K G+ + A                               
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDA------------------------------- 476

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
                             K+L ++   G  PDIITY++L+ G  + G ++ A+  F +L+
Sbjct: 477 -----------------IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             G++P+++TY +++ GL +  +   A      M   GC P+   Y  L+
Sbjct: 520 EMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 15/381 (3%)

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  ++A+E   +  + +C PDV  Y  ++    ++     A+ +  EM    C P++VT+
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LING+ K G+ + AI+ L+ M   G  PN  T+ I++  +C   R  +A +   +M  
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GCSP  V +N L+N  C+   +  A+ +L    + G  P   SY+ L+  L + K+ + 
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A  +   M      PD+V Y  ++  L + GKV  A+++L+ +  +G  P    YN +I 
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G   +G  D A  L  E+  +   P+  T++ L+ G+ R G VD+A   F+ +E+ G  P
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP 525

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   +N+++ GLCKA +  +A + L Y +  G  PT              + S   ++E 
Sbjct: 526 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT--------------ETSYMILIEG 571

Query: 471 YCTAGLIHKAYKILMQLAESG 491
               GL  +A ++L +L   G
Sbjct: 572 LAYEGLAKEALELLNELCSRG 592



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 170/342 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I    K +G     + LDE+R          + VLI+G  K G  ++A+     M  
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + CQP+V  +N +L        ++ A     EM++  C P++VTF++LIN L + G    
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +L++M Q G  PN  +Y  ++  LC+  + + A      M   GC PD V YN LL 
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  +VD A+ +L      G  P L +Y+ +IDGL +  + D+A     +M  + ++P
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++ Y  ++ GLS  GKV +A+    D+ E G+ P+   YN+++ G C      +A    
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +  R   P   ++ ILI G+   G+  +A +L N++   G
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L   G++++  K L DM  RG +PD     +LI+G C  G   +A  +   +    +
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
           +P+  T+ +LI G C+ G +  A +L ++M  +   P V  +N ++  LC +G+L++A  
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAME 233

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +L  +M+    P              D  +   ++E  C    + +A K+L ++ + G  
Sbjct: 234 VLDRQMQRECYP--------------DVITYTILIEATCKESGVGQAMKLLDEMRDKGCK 279

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TYN LING CK G ++ A++    +   G +P+ +T+  ++  +    R  DA + 
Sbjct: 280 PDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKF 339

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
             +M + GC+PS   +  L+ + CR+     A  +  +  +     +  S   +   L K
Sbjct: 340 LAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCK 399

Query: 614 G-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTP 670
             ++E AI+ L  M  +     +  Y   L  LC+DG+V  A+ I + L    C  ++  
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            + V  I GL K G  D A+ +       G  L+P +  Y       S++ K   A    
Sbjct: 460 YNTV--IDGLSKVGKTDDAIKLLDEMKGKG--LKPDIITYSTLVGGLSREGKVDEAIAFF 515

Query: 731 CRMKSVGYDLDACLY 745
             ++ +G   +A  Y
Sbjct: 516 HDLEEMGVKPNAITY 530



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F +LI+   + G   +A++   KM +  C P+   YN +L+   + +    A+ 
Sbjct: 351 SVVT--FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIE 408

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
               MV   C P+IVT++ L+  L K GK +VA+++L+++  +G  P   TY  VI GL 
Sbjct: 409 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLS 468

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           ++ + D+A +L  +MK  G  PD + Y+ L+ G  +  +VDEA+A     E+ G  P   
Sbjct: 469 KVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAI 528

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ ++ GL +A++   A  +   M     +P    Y ++I GL+  G  K+A++LL+++
Sbjct: 529 TYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588

Query: 335 RERGIVPDTYCYNALIK 351
             RG+V  +     ++K
Sbjct: 589 CSRGVVKKSSAEQVVVK 605



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           LS   +   + K K  +    +      R       + + +++ L K    D+  + L++
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L S   S V   +  +I G  KVG  + A++   +MK    +PD+  Y+ ++    R+  
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+A ++++ ++   PN +T++ ++ GL K+ +T  AI  L  M  RG  P + +Y I
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 209 VISGLCQINRADEAYRLFLKMKDSG 233
           +I GL     A EA  L  ++   G
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRG 592


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 239/459 (52%), Gaps = 10/459 (2%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + DV+ YN +L+I  +         VY +++   C PN+VTF +LI G  K+G+   A++
Sbjct: 24  KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALE 83

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
            L  + +  + P+ + +  +I GL +    D+A +LF  M+ S  +PD   YN +++G C
Sbjct: 84  FLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLC 143

Query: 250 KLRRVDEALALLRSFEKDG--FVPRLGSYSCLID-GLFRAKRYDEAYAWYRKMFEEKIEP 306
           K   +++A  LL    + G    P + +Y+ LI+ G+ +    +EA      M      P
Sbjct: 144 KSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAP 203

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV+ Y  +I  L  AG+V +A ++L  M      PD   +N L+ GFC  G+L +A  + 
Sbjct: 204 DVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ + + LP+  T+TIL+ G+CR G V  A  L  ++ + G  P V  + +L+DGLCK+
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           GE+E+A+ L  +M   +     + +    N V    +   ++      G I KA  ++  
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSI----NMVPPLFTYNIVLGGLIKDGSISKAVSLISD 376

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L   G +PD++TYN+LI+G CK   +  A  L  E+   G  P+ VT G+++ GL RV R
Sbjct: 377 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGR 436

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            +DA+ +  +M +    P+  VY SL+   C+  +   A
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 475



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 271/547 (49%), Gaps = 31/547 (5%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           ++  P +  +FF WA ++   +    S + ++ +L+K        +   +L     S   
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             F +LI G  K G   +ALE    + EF   PDVYI+N +++  F+      A+ ++  
Sbjct: 63  VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--ILPNKFTY-TIVISGLCQ 215
           M      P+I T++ +I+GL KSG  E A ++L+EM +RG    P+  TY T++ +G+C+
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               +EA  +   MK +G +PD + YN++++  C   RV EA  +L++       P L +
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVT 239

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ L+DG  +A     A     +M  E I PDV+ Y +++ GL   G+V+ A  LL ++ 
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL---------PNTHTFTILIC 386
            +G +PD   Y +L+ G C  G +++A  L  E+  R+ L         P   T+ I++ 
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G+ ++G +  A  L + +   G  P V  +N LIDGLCKA  + +A  L  +M  +G  P
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +  +L ++V   C  G +  A+ ++++++   + P+++ Y SLI+G
Sbjct: 420 --------------NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDG 465

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK   ++ A  +   ++ +G+  D   Y  LI  +    R  +A  ++ +M   G  P 
Sbjct: 466 LCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPD 525

Query: 566 PAVYKSL 572
            +  K+L
Sbjct: 526 GSTSKTL 532



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 245/527 (46%), Gaps = 51/527 (9%)

Query: 178 LSKSGKTEVAIKMLD-EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           + +S + ++AI+  D    Q G   +  +Y  ++  L +        +++  +  SGCSP
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP 60

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V +  L+ G CK  +   AL  LR+ ++    P +  ++ LI GLF+    D+A   +
Sbjct: 61  NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF 120

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIK-GF 353
             M   ++ PD+  Y  +I GL ++G ++ A +LL +M  RG    PD   YN LI  G 
Sbjct: 121 ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGI 180

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G +++A  +   +      P+  T+  +I  +C  G V +A ++   M    C P +
Sbjct: 181 CKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDL 237

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM--------------------EIGKNPTLFLRLSQ 453
             FN L+DG CKAG L +A  +  +M                     +G+    F  L +
Sbjct: 238 VTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEE 297

Query: 454 GGNR--VHDKASLQTMVEQYCTAGLIHKAYK---------ILMQLAESGNLPDIITYNSL 502
              +  + D  +  ++V+  C +G I +A+K         IL ++     +P + TYN +
Sbjct: 298 IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIV 357

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           + G  K G+I+ A+ L  +L  +G  PD VTY TLI+GL + +R  +A  +  +M   GC
Sbjct: 358 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC 417

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE------- 615
            P+     S++   CR  +   A+SL ++  R     +     S+ + L K +       
Sbjct: 418 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACV 477

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           V +A++G       L+DF    Y   ++ +   G+V EA+ ++  +V
Sbjct: 478 VLDAMRG---QGVALDDF---AYRKLIVSMIHGGRVAEAMAMYDEMV 518


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 178/680 (26%), Positives = 312/680 (45%), Gaps = 83/680 (12%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL--------------------------- 74
           ++P++  +FF WA  +   R    +  +I  L+                           
Sbjct: 82  EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 141

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
             N FD+ W T +   SG     S VF VL S + ++G  E+A E F +M+ F       
Sbjct: 142 VCNIFDMLWSTRNICVSG-----SGVFDVLFSVFVELGLLEEANECFSRMRNF------- 189

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
                                         LP   + + L++ LSKSG  ++  K  ++M
Sbjct: 190 ----------------------------RTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
              GI P+ FTY ++I  LC+    + + RLF++M++ G SPD V YN+L++G+ K+  +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           +E  +L    +  G VP + +Y+ LI+   + ++   A+ ++ +M    ++P+VV Y  +
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I    + G ++ A+KLL DMR  G++P+ + Y +LI   C  G L +A  L  ++ +   
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             N  T+T L+ G+C+ G + +A+++F  M K G  P+  ++ AL+ G  KA  +E A  
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +  +M E    P L L  S              ++  +C+   + +   IL ++   G  
Sbjct: 462 ILKQMTECNIKPDLILYGS--------------IIWGHCSQRKLEETKLILEEMKSRGIS 507

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            + +   ++I+ + K G  + AL  F+E+Q  G+    VTY  LI+GL      E A   
Sbjct: 508 ANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDY 567

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQ 612
           F +M   G  P+ AVY SL+   C       A  L+ +   R ++         I+  L+
Sbjct: 568 FCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLK 627

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G ++ A+  +  M     +F L  YT  + G  Q G++ +A   F+ ++E   +     
Sbjct: 628 HGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 687

Query: 673 CVKLIHGLCKRGYLDLAMDV 692
           C+ L+    KRG LD A+++
Sbjct: 688 CICLLREYYKRGQLDEAIEL 707



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 253/521 (48%), Gaps = 15/521 (2%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+ N Q+  +FF          S  + + +I  L K    +   +   ++R   +S    
Sbjct: 207 KSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 266

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY KVG  E+    F +MK+  C PD+  YN ++N   + +    A   + EM
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 326

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+VT+S LI+   K G  + AIK+L +M + G+LPN+FTYT +I   C+    
Sbjct: 327 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNL 386

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA++L   M  +G   + V Y ALL+G CK  R+ EA  + RS  KDG  P    Y+ L
Sbjct: 387 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 446

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +A+R ++A    ++M E  I+PD++LYG +I G     K+++   +L +M+ RGI
Sbjct: 447 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 506

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             +      +I  +   G    A +   E+          T+ +LI G+C  G+V+ A  
Sbjct: 507 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVD 566

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
            F +M   G  P+V ++ +LIDGLC    +E A  LF +M+  G  P             
Sbjct: 567 YFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP------------- 613

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++     G + +A  ++ ++ E     D+  Y SL++GF + G ++ A K 
Sbjct: 614 -DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 672

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           F E+  KG+ P+ V    L+    +  + ++A  +  +M +
Sbjct: 673 FNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 220/481 (45%), Gaps = 57/481 (11%)

Query: 234 CSPDFVAYNALLNGFCKLRRVDEA---LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           C      ++ L + F +L  ++EA    + +R+F     +P+  S + L+  L ++    
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRT---LPKARSCNFLLHRLSKSGNGQ 212

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
               ++  M    I P V  Y VMI  L + G ++++ +L   MRE G+ PD   YN+LI
Sbjct: 213 LVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI 272

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G+  +G L++  SL  E+     +P+  T+  LI   C+   +  A + F++M+  G  
Sbjct: 273 DGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P+V  ++ LID  CK G ++ A  L   M   G  P  F              +  ++++
Sbjct: 333 PNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF--------------TYTSLID 378

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C AG + +A+K+L  + ++G   +I+TY +L++G CK G +  A ++F+ +   G+ P
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +   Y  L++G  + +R EDA +I  QM +    P   +Y S++   C +RK        
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKL------- 491

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
                      +E+   +EE   +G   N +     +D                   + G
Sbjct: 492 -----------EETKLILEEMKSRGISANPVISTTIID----------------AYFKAG 524

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           +  +ALN F  + +     T  +   LI GLC+ G ++LA+D F   L  G  L+P V  
Sbjct: 525 KSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG--LQPNVAV 582

Query: 710 Y 710
           Y
Sbjct: 583 Y 583



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 115/498 (23%), Positives = 196/498 (39%), Gaps = 107/498 (21%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF     SY  ++  +FRA+ Y +A+             D V   +M   +     V + 
Sbjct: 99  GFRHTTESYCIIVHLVFRARMYTDAH-------------DTVKEVIMNSRMDMGFPVCNI 145

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +L   R    V  +  ++ L   F +LGLL++A      +    +LP   +   L+  
Sbjct: 146 FDMLWSTRNI-CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           + ++G     +K FN M  AG  PSV  +N                              
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYN------------------------------ 234

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                              M++  C  G +  + ++ +Q+ E G  PD++TYNSLI+G+ 
Sbjct: 235 ------------------VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 276

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           KVG++     LF E++  G  PD +TY  LIN   + ++   AF  F +M  NG  P+  
Sbjct: 277 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 336

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM- 626
            Y +L                                  I+ F ++G ++ AI+ L +M 
Sbjct: 337 TYSTL----------------------------------IDAFCKEGMMQGAIKLLXDMR 362

Query: 627 --DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                 N+F    YT  +   C+ G + EA  + + +++    +   +   L+ GLCK G
Sbjct: 363 RTGLLPNEF---TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAG 419

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +  A +VF   LK+G     +V   L+    + K  +   A  +L +M       D  L
Sbjct: 420 RMIEAEEVFRSMLKDGISPNQQVYTALVHG--YIKAERMEDAMKILKQMTECNIKPDLIL 477

Query: 745 YPKTKSLLPGPWNTREME 762
           Y    S++ G  + R++E
Sbjct: 478 YG---SIIWGHCSQRKLE 492



 Score = 45.8 bits (107), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G       E A + F +M+     PD+  + A+++   +      AL +   M
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +L    ++  ++ L++G S+ G+   A K  +EM ++GILP +     ++    +  + 
Sbjct: 642 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701

Query: 220 DEAYRLFLKMKDSGCSPDF---VAYN 242
           DEA  L  +M+    S +F   +AYN
Sbjct: 702 DEAIELKNEMERMAYSFEFDAQLAYN 727


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 185/662 (27%), Positives = 296/662 (44%), Gaps = 65/662 (9%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W   D + SG VS  +  F VLI      G  + A E F KM E  C+P+ Y +  ++  
Sbjct: 42  WLCKDMVASG-VSPETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRG 100

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R       L +  EM +L   PN V ++ LI+   K GKT+ A K++DEM + G+ P+
Sbjct: 101 YCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPD 160

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGC----SPDFVAYNALLNGFCKLRRVDEAL 258
             T+   IS LC   +  EA R+F  M+         P+ + YN +L GFCK   ++EA 
Sbjct: 161 VVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEAR 220

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           AL    +    +    SY+  + GL R  +  EA    ++M +  +EP+V  Y +++ GL
Sbjct: 221 ALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + G + DA  L+  M   G++PDT  Y  L+ G+C  G + +A ++  E+ +    PN 
Sbjct: 281 CKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNN 340

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           +T  IL+  + + G + +A++L  KM + G        N +IDGLC  G+L+KA      
Sbjct: 341 YTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKA------ 394

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           +EI             G   H  A+L  +   Y   GL+  +       +    +PD+I+
Sbjct: 395 IEI-----------VNGMWTHGSAALGNLGNSY--IGLVDDSD------SRKKCMPDLIS 435

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+++I+G CK G +  A K F E+  K L+PDS  Y   I+   +  +   AFR+   M 
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495

Query: 559 QNGCTPSPAVYKSLMTW---------------SCRRRKFSLAFSLWLQYLRDI--SGRDD 601
           + GC  +   Y SL+                   R R  S   S++   L  +   GR  
Sbjct: 496 KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVK 555

Query: 602 ESMKSIEEFLQKGEVEN------------------AIQGLLEMDFKLNDFQLAPYTIWLI 643
           ++   ++E LQKG   N                  A+  + E+   +   + A Y++   
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFN 615

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
            L   G+V +A  +F   ++    V       LI  LCK   LD A  +    +  G+  
Sbjct: 616 ELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWF 675

Query: 704 RP 705
            P
Sbjct: 676 DP 677



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 273/588 (46%), Gaps = 55/588 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  +++L+   +K G+ +    +  +M   G+ P  +T+ ++I  LC     D+A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM + GC P+  ++  L+ G+C+     + L LL    + GF P    Y+ LI    +
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV----P 341
             + D+A     +M ++ + PDVV +   I  L  +GKV +A ++  DM+   ++    P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   YN ++ GFC  G+L++AR+L  ++   ++L N  ++ I + G+ R G + +AQ + 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M   G  P+V  +N ++DGLCK G L  A +L             +RL      + D 
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARML-------------MRLMTSSGVLPDT 305

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  YC  G + +A  +L ++   G  P+  T N L+    K G I+ A +L ++
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQK 365

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-------------------- 561
           +  KG   D+VT   +I+GL    + + A  I   M  +G                    
Sbjct: 366 MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425

Query: 562 ---CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD---DESMKS--IEEFLQK 613
              C P    Y ++++  C+  +   A   +++ +    G++   D ++    I  F ++
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMM----GKNLQPDSAIYDVFIHSFCKE 481

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G++ +A + L +M+ K  +  L  Y   ++GL    Q+ E   +   + E    V+P   
Sbjct: 482 GKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRE--RGVSPDVS 539

Query: 674 V--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           +   ++  LC+ G +  A  V    L+ G  + P + ++ +    F K
Sbjct: 540 IYNNVLSSLCEGGRVKDAPSVLDEMLQKG--ISPNISSFSILIKAFCK 585



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 214/481 (44%), Gaps = 39/481 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + + + G  ++G   +A     +M +   +P+VY YN V++   +  +   A  +   M 
Sbjct: 238 YNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMT 297

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               LP+ VT++ L++G   +GK   A  +L EM + G  PN +T  I++  L +  R  
Sbjct: 298 SSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRIS 357

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF----------- 269
           EA  L  KM + G   D V  N +++G C   ++D+A+ ++      G            
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 270 ------------VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
                       +P L SYS +I GL +A R  EA   + +M  + ++PD  +Y V I  
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+  A ++L DM ++G       YN+LI G      + +   L  E+ +R   P+
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  ++  +C  G V DA  + ++M + G  P++  F+ LI   CKA +    + +F 
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIF- 596

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL-MQLAESGNLPDI 496
             EI  N              H +A       +    G + KA ++    L  S ++ + 
Sbjct: 597 --EIALNVC-----------GHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNF 643

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           + Y  LI+  CK   ++ A  +  +L  KG   D  ++  +I+GL +   + +A  +  +
Sbjct: 644 L-YKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEK 702

Query: 557 M 557
           M
Sbjct: 703 M 703



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 185/424 (43%), Gaps = 69/424 (16%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY   G   +A     +M    C P+ Y  N +L   +++     A  +  +M
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--------------------- 198
            +   + + VT +++I+GL  +GK + AI++++ M   G                     
Sbjct: 367 NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSR 426

Query: 199 --ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
              +P+  +Y+ +ISGLC+  R  EA + F++M      PD   Y+  ++ FCK  ++  
Sbjct: 427 KKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISS 486

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  +L+  EK G    L +Y+ LI GL    +  E Y    +M E  + PDV +Y  ++ 
Sbjct: 487 AFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLS 546

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC---DLGLLDQARSLQVEIWKRD 373
            L E G+VKDA  +L +M ++GI P+   ++ LIK FC   D   +D+   + + +    
Sbjct: 547 SLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606

Query: 374 SLPNTHTFTILICG-------------------------------MCRNGMVDDAQKLFN 402
               + TF  L+ G                               +C++  +DDA  + +
Sbjct: 607 EALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILH 666

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG---NRVH 459
           K+   G +     F  +IDGL K G   +A+ L  KM         + ++  G   N+VH
Sbjct: 667 KLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM---------MEMASEGKVKNKVH 717

Query: 460 DKAS 463
             AS
Sbjct: 718 QNAS 721



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 7/208 (3%)

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
           N P I  YN L+    K G ++    L K++   G+ P++ T+  LI  L      +DA 
Sbjct: 17  NPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAR 76

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
            +F +MP+ GC P+   +  L+   CR    S    L L  +R +    ++ + +  I  
Sbjct: 77  ELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLEL-LGEMRRLGFSPNKVVYNTLISS 135

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F ++G+ ++A + + EM        +  +   +  LC  G+V EA  IF  +   + +  
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 670 P-PSCVK---LIHGLCKRGYLDLAMDVF 693
           P P+ +    ++ G CK G L+ A  +F
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALF 223



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 4/200 (2%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K L+++  NS ++ +  K   F++Y   +DE+R   VS    ++  ++S   + G  + A
Sbjct: 501 KTLQTY--NSLIMGLGSKNQIFEIY-GLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDA 557

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
                +M +    P++  + ++L  AF K     A+   +E+    C      +SL  N 
Sbjct: 558 PSVLDEMLQKGISPNISSF-SILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNE 616

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L   G+   A ++ +    R      F Y  +I  LC+  + D+A  +  K+ D G   D
Sbjct: 617 LLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFD 676

Query: 238 FVAYNALLNGFCKLRRVDEA 257
             ++  +++G  K     EA
Sbjct: 677 PASFMPVIDGLGKRGNKHEA 696


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 169/599 (28%), Positives = 274/599 (45%), Gaps = 77/599 (12%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P+++ ++ ++  LS +  T  A +  D M   G+ PN +TY I+I  LC      EA  
Sbjct: 113 VPSVLAYNAVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +   M+ +GC P+ V YN L+  F +   VD A  L+      G  P L +++ +++G+ 
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +A + ++A   + +M  E + PD V Y  ++ G  +AG   +A+ + ++M ++GI+PD  
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            + +LI   C  G L+ A +L  ++ +R    N  TFT LI G C+ G +DDA      M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKAS 463
            +    PSV  +NALI+G C  G +++A  L ++ME  G  P              D  +
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKP--------------DVVT 397

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN----------------------- 500
             T++  YC     H A+++  Q+ E G LPD ITY+                       
Sbjct: 398 YSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI 457

Query: 501 ------------SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
                       SLI+G CK GN+  AL L  ++   G+ PD VTY  LINGL +  R  
Sbjct: 458 KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 517

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW---------------LQYL 593
           +A ++  ++      P+   Y +LM   CR+ +     +L                 Q +
Sbjct: 518 EAQQLLFKLYHEEPIPANTKYDALM-HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM 576

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLI-GLCQ 647
            D +   D S+ S  I    + G V  A+   + +L+  F  N       TI LI GL +
Sbjct: 577 LDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTS----TISLIRGLFE 632

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +G V EA  +   L+ C ++    +   LI      G +D  +DV     K+G +  PR
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 691



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 235/493 (47%), Gaps = 39/493 (7%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D + S  V+     + +LI      G  ++AL     M+   C P+V  YN ++   FR 
Sbjct: 139 DSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRA 198

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +   M+     PN+VTF+ ++NG+ K+GK E A K+ DEM + G+ P+  +Y
Sbjct: 199 GEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSY 258

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ G C+   + EA  +F +M   G  PD V + +L++  CK   ++ A+ L+R   +
Sbjct: 259 NTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRE 318

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G      +++ LIDG  +    D+A    R M + +I+P VV Y  +I G    G++ +
Sbjct: 319 RGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDE 378

Query: 327 AMKLLSDMR-----------------------------------ERGIVPDTYCYNALIK 351
           A +LL +M                                    E+G++PD   Y++LI+
Sbjct: 379 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C+   L  A  L   + K    P+  T+T LI G C+ G V+ A  L +KM KAG  P
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498

Query: 412 SVGMFNALIDGLCKAGE-LEKANLLF--YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            V  ++ LI+GL K+   +E   LLF  Y  E     T +  L     +   K+ L  ++
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL-ALL 557

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +C  GL+++A K+   + +     D   Y+ LI+G C+ GN+  AL   K++  +G  
Sbjct: 558 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFA 617

Query: 529 PDSVTYGTLINGL 541
           P+S +  +LI GL
Sbjct: 618 PNSTSTISLIRGL 630



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 234/535 (43%), Gaps = 67/535 (12%)

Query: 233 GCSPDFVAYNA----------------------------------LLNGFCKLRRVDEAL 258
           G  P  +AYNA                                  L+   C      EAL
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           ++LR     G  P + +Y+ L+   FRA   D A      M +  ++P++V +  M+ G+
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +AGK++DA K+  +M   G+ PD   YN L+ G+C  G   +A S+  E+ ++  +P+ 
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            TFT LI  MC+ G ++ A  L  +M + G   +   F ALIDG CK G L+ A L    
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350

Query: 439 MEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M   +  P++                   ++  YC  G + +A ++L ++   G  PD++
Sbjct: 351 MRQCRIKPSVV--------------CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVV 396

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY+++I+ +CK  + + A +L +++  KG+ PD++TY +LI  L    R  DA  +F  M
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDISG--RDDES 603
            + G  P    Y SL+   C+      A SL             + Y   I+G  +   +
Sbjct: 457 IKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLN---DFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
           M++ ++ L K   E  I    + D  ++     +L      L G C  G + EA  ++  
Sbjct: 517 MEA-QQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           +++    +       LIHG C+ G +  A+      L+ GF         L+R L
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 220/480 (45%), Gaps = 32/480 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++++ + K    +   +  DE+    ++     +  L+ GY K G   +AL  F +M +
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  + +++++  +      A+ +  +M +     N VTF+ LI+G  K G  + 
Sbjct: 284 KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 343

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+  +  M Q  I P+   Y  +I+G C + R DEA  L  +M+  G  PD V Y+ +++
Sbjct: 344 ALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 403

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK      A  L +   + G +P   +YS LI  L   KR  +A+  ++ M +  ++P
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D   Y  +I G  + G V+ A+ L   M + G++PD   Y+ LI G        +A+ L 
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523

Query: 367 VEIWKRDSLP-NTHTFTILIC--------------GMCRNGMVDDAQKLFNKMEKAGCFP 411
            +++  + +P NT    ++ C              G C  G++++A K++  M       
Sbjct: 524 FKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNL 583

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
              +++ LI G C+AG + KA L F+K  ++ G  P              +  S  +++ 
Sbjct: 584 DGSVYSVLIHGHCRAGNVMKA-LSFHKQMLQRGFAP--------------NSTSTISLIR 628

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G++ +A +++ QL    +L D     +LI+     GN++  L +   +   GL P
Sbjct: 629 GLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 171/396 (43%), Gaps = 50/396 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I ++ K    +     + ++R   + +    F  LI G+ K G  + AL +   M++
Sbjct: 294 TSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQ 353

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P V  YNA++N          A  + +EM      P++VT+S +I+   K+  T  
Sbjct: 354 CRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHS 413

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++  +M ++G+LP+  TY+ +I  LC+  R  +A+ LF  M   G  PD   Y +L++
Sbjct: 414 AFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   V+ AL+L     K G +P + +YS LI+GL ++ R  EA     K++ E+  P
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533

Query: 307 --------------------------------------------------DVVLYGVMIR 316
                                                             D  +Y V+I 
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 593

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G   AG V  A+     M +RG  P++    +LI+G  + G++ +A  +  ++    SL 
Sbjct: 594 GHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLA 653

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           +      LI      G VD    + + M K G  PS
Sbjct: 654 DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 189/450 (42%), Gaps = 88/450 (19%)

Query: 338 GIVPDT----------------------------------YCYNALIKGFCDLGLLDQAR 363
           G VP                                    Y YN LI+  C  G   +A 
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           S+  ++      PN  T+  L+    R G VD A++L   M   G  P++  FN++++G+
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 424 CKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CKAG++E A  +F + M  G  P              D  S  T+V  YC AG  H+A  
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAP--------------DGVSYNTLVGGYCKAGCSHEALS 276

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  ++ + G +PD++T+ SLI+  CK GN+  A+ L ++++ +GL+ + VT+  LI+G  
Sbjct: 277 VFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFC 336

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +    +DA      M Q    PS   Y +L+   C                  + GR DE
Sbjct: 337 KKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC------------------MVGRMDE 378

Query: 603 SMKSIEEFLQKGEVENAI---------------QGLLEMDFKLNDFQLAP----YTIWLI 643
           + + + E   KG   + +                   E++ ++ +  + P    Y+  + 
Sbjct: 379 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
            LC++ ++ +A  +F  +++        +   LI G CK G ++ A+ +    +K G + 
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL- 497

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            P V  Y +     SK  + + A  LL ++
Sbjct: 498 -PDVVTYSVLINGLSKSARAMEAQQLLFKL 526


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/587 (26%), Positives = 287/587 (48%), Gaps = 26/587 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           ++ F +LI GY      + AL+   KM EF C PD   YN +L+   +++L   A  +  
Sbjct: 213 TNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLL 272

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M      PN  T+++L+ G  + G  + A K+++ MT+  +LP  +TY ++++G C   
Sbjct: 273 DMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDG 332

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + DEA+R+  +M+     PD V YN L++G  + R   E  +L+   +K G      +Y+
Sbjct: 333 KIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYN 392

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++  + +     EA     KM E  + PD V Y  +I    +AGK+  A +++ +M  +
Sbjct: 393 IILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSK 452

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+  DT+  N ++   C    LD+A +L     KR  + +  ++ ILI G  ++   D A
Sbjct: 453 GLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRA 512

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGN 456
             L+++M++    PS   +N++I GLC++ ++++A + L   +E G  P           
Sbjct: 513 LNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVP----------- 561

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D+ +   ++  +C  G + KA++   ++ E+   PD+ T N L+ G C+ G +  AL
Sbjct: 562 ---DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           KLF  L  KG   D VTY T+I+ L +  + E+A+ +  +M      P    YK ++   
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
               +   A    L+ +        ES    ++ L+ G+ +N +   +   F   DF+  
Sbjct: 679 TDAGRIKEAEEFTLKMV--------ESGIVHDQNLKLGKGQNVLTSEVSEHF---DFKSI 727

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            Y+  +  LC   + K+A+++F  + +    +   + + L+ GL KR
Sbjct: 728 AYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 257/554 (46%), Gaps = 62/554 (11%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            S + ++  LLK          L +++S  +S     + +L+ GY ++G  ++A +    
Sbjct: 249 VSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEI 308

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M   +  P V+ YN ++N          A  +  EM K+N LP++VT++ LI+G S+   
Sbjct: 309 MTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRD 368

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           +     +++EM ++G+  N  TY I++  +C+     EA     KM+++G SPD V YN 
Sbjct: 369 SSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNT 428

Query: 244 LLNGFCKL-----------------------------------RRVDEALALLRSFEKDG 268
           L+  +CK                                    +++DEA  LL S  K G
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRG 488

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           ++    SY  LI G F+ ++ D A   + +M E +I P  + Y  +I GL ++ KV  A+
Sbjct: 489 YILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAI 548

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
             L++M E G+VPD   YN +I GFC  G +++A     E+ +    P+ +T  IL+ G+
Sbjct: 549 DKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGL 608

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTL 447
           CR GM++ A KLFN +   G    V  +N +I  LCK G+ E A  L  +ME  K  P  
Sbjct: 609 CREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGP-- 666

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D+ + + ++     AG I +A +  +++ ESG + D            
Sbjct: 667 ------------DQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD---------QNL 705

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K+G   G   L  E+  +     S+ Y   IN L    + +DA  +F ++ + G   +  
Sbjct: 706 KLGK--GQNVLTSEVS-EHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKY 762

Query: 568 VYKSLMTWSCRRRK 581
            Y +LM    +RRK
Sbjct: 763 TYLNLMEGLIKRRK 776



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 263/583 (45%), Gaps = 65/583 (11%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           SLLI+ +S   + E+  K++   T+    P+K      I    Q+++   A ++F KMK 
Sbjct: 110 SLLISFISSDRQHELH-KLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKR 168

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD----GFVPRLGSYSCLIDGLFRAK 287
               P+ +  N L+N   +      ++ L R   KD    G VP   S++ LI G     
Sbjct: 169 LNYRPNLLTCNTLMNSLVRYPS-SSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLES 227

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           +  +A  W  KM E    PD V Y  ++  L +   +++A  LL DM+ +G+ P+ + YN
Sbjct: 228 KVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYN 287

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            L+ G+C LGLL +A  + +EI  R++L P   T+ +L+ G C +G +D+A ++ ++MEK
Sbjct: 288 MLVCGYCRLGLLKEATKV-IEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEK 346

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
               P V  +N LIDG  +  +  +   L  +M+            + G +  +  +   
Sbjct: 347 MNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD------------KKGVKC-NAVTYNI 393

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C  G + +A   L ++ E+G  PD +TYN+LI  +CK G +  A ++  E+  KG
Sbjct: 394 ILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG 453

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L+ D+ T  T+++ L    + ++A+ +     + G       Y  L+    +  K   A 
Sbjct: 454 LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRAL 513

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW----L 642
           +LW           DE                           + + Q+ P TI     +
Sbjct: 514 NLW-----------DE---------------------------MKERQIMPSTITYNSVI 535

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GLCQ  +V +A++  + ++E   +    +   +IHG C  G ++ A       ++N F 
Sbjct: 536 GGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK 595

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                CN LLR L   ++     A  L   + S G D+D   Y
Sbjct: 596 PDVYTCNILLRGL--CREGMLEKALKLFNTLVSKGKDIDVVTY 636



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 25/262 (9%)

Query: 52  IWAAKRKR--LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           +W   ++R  + S  + ++VI  L +    D     L+E+    +      + ++I G+ 
Sbjct: 515 LWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFC 574

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
             G+ EKA +   +M E   +PDVY  N +L    R+ +   AL ++  +V      ++V
Sbjct: 575 LEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVV 634

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ +I+ L K GK E A  +L EM  + + P+++TY ++I+ L    R  EA    LKM
Sbjct: 635 TYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKM 694

Query: 230 KDSGCSPD-----------------------FVAYNALLNGFCKLRRVDEALALLRSFEK 266
            +SG   D                        +AY+  +N  C   +  +A+ L     K
Sbjct: 695 VESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTK 754

Query: 267 DGFVPRLGSYSCLIDGLFRAKR 288
           +G      +Y  L++GL + ++
Sbjct: 755 EGVALNKYTYLNLMEGLIKRRK 776


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 169/607 (27%), Positives = 277/607 (45%), Gaps = 63/607 (10%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYR 224
           PN  T+++++NGL K+  T  A ++L EM   + + P+  TY+ VI+G C+    D A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 225 LFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +  +M    G +PD V Y ++++G C+  ++D A  ++R  +  G  P   ++S LI G 
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS--DMRERGI-V 340
             A++ DEA   Y+++       D V    +I GL    ++ +A +L    +MRE G   
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y ALI GFC  G L++A  +   +  R  +PN  T++ L+ G+C+ G +D A  L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M   GC P+V  +  LI GLC A +++ A LL  +M     P              D
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPA-------------D 293

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             S   +++ YC  G I +A ++  ++A    LPD ITY  L+ GFC    +  A  L +
Sbjct: 294 TVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLE 353

Query: 521 ELQL-KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            ++   G+ PD VTY  ++ G  R  R  +A     +M      P+   Y SL+   C+ 
Sbjct: 354 NMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCK- 412

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                                             G V +A++ L  +D       +  YT
Sbjct: 413 ---------------------------------AGRVNHAMEVLKNVDKP----DVVTYT 435

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           I + GLC   + +EAL +   +V  +   +  +   +I  LC+ G +D A  + +    +
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHL--LCRMKSVGYDLDACLYPKT--KSLLPGP 755
           G  L P +  Y      FS+  +   AY L  + R K+      A L P+    +L+ G 
Sbjct: 496 G--LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553

Query: 756 WNTREME 762
              RE++
Sbjct: 554 CKAREID 560



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 280/584 (47%), Gaps = 34/584 (5%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKE 126
           V++ L K       ++ L E+R G  SV  D+  +  +I+G+ K G+ ++A E   +M  
Sbjct: 15  VVNGLCKARLTSKAYEVLKEMRDGK-SVAPDLVTYSTVINGFCKQGEMDRACEILREMVT 73

Query: 127 FD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
            D   PDV  Y +V++   R      A  +  EM      P+  TFS LI G   + K +
Sbjct: 74  RDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVD 133

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK---DSGCSPDFVAYN 242
            A+K+  E+       +  + + +I+GLC+  R  EAY LF +M+   D    PD V Y 
Sbjct: 134 EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYT 193

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           AL++GFCK   +++A+ +L   E    VP + +YS L+ GL +A   D+A   +R+M  +
Sbjct: 194 ALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK 253

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+VV Y  +I GL  A KV  A  L+ +M       DT  YNAL+ G+C LG +++A
Sbjct: 254 GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEA 313

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME-KAGCFPSVGMFNALID 421
           + L  E+  +  LP+  T+T L+ G C    +++A+ L   M+  AG  P V  ++ ++ 
Sbjct: 314 KQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVA 373

Query: 422 GLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---GNRVH---------DKASLQT 466
           G  +A    +A     +M    +  N   +  L  G     RV+         DK  + T
Sbjct: 374 GYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVT 433

Query: 467 ---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++E  C      +A  +L ++      P + T+NS+I   C++G+++ A KL   + 
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 493

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA-------VYKSLMTWS 576
             GL P  VTY TL+ G  R  R E A+ +F  M +     S A        + +L+   
Sbjct: 494 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553

Query: 577 CRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENA 619
           C+ R+   A ++  +   R+    +++ +  ++  L+ G  E A
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 597



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 238/470 (50%), Gaps = 30/470 (6%)

Query: 104 LISGYYKVGDCEKALESFGKMK---EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           LI+G  +     +A E F +M+   +   +PDV  Y A+++   +      A+ +   M 
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C+PN+VT+S L++GL K+G  + A+ +   MT +G +PN  TYT +I GLC  ++ D
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M  + C  D V+YNALL+G+C+L R++EA  L +       +P   +Y+CL+
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336

Query: 281 DGLFRAKRYDEAYAWYRKM-FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            G   A R +EA      M     I+PDVV Y +++ G S A +  +A + + +M  R +
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y++LI G C  G ++ A    +E+ K    P+  T+TI+I G+C     ++A  
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHA----MEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALT 452

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRV 458
           L  +M      PSVG FN++I  LC+ G++++A  LL      G  P +           
Sbjct: 453 LLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMV---------- 502

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQL-------AESGNLPDIITYNSLINGFCKVGN 511
               +  T++E +   G +  AY++   +       + + NL     +++LI G CK   
Sbjct: 503 ----TYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKARE 558

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           I+ A+ + +EL+ +   P       +++GL R  R E+A ++   + + G
Sbjct: 559 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 16/352 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L   +  D     +DE+ +      +  +  L+ GY ++G  E+A + F +M  
Sbjct: 263 TTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAA 322

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL--PNIVTFSLLINGLSKSGKT 184
             C PD   Y  ++   F     L       E +K      P++VT+S+++ G S++ + 
Sbjct: 323 KSCLPDRITYTCLVR-GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRF 381

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A + + EM  R + PN  TY+ +I GLC+  R + A  + LK  D    PD V Y  +
Sbjct: 382 VEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV-LKNVDK---PDVVTYTIV 437

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C   R +EAL LL         P +G+++ +I  L R    DEA+     M    +
Sbjct: 438 IEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG--------IVPDTYCYNALIKGFCDL 356
           EP +V Y  ++ G S  G+++ A +L   MR +         +VP+   ++ALI+G C  
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKA 556

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +D+A ++  E+  R+  P       ++ G+ R G  ++A KL N + K G
Sbjct: 557 REIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 127/282 (45%), Gaps = 45/282 (15%)

Query: 100 VFFVLISGYYKVGDCEKA---LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            +  L+ G+      E+A   LE+       D  PDV  Y+ V+    R + F+ A    
Sbjct: 331 TYTCLVRGFCNASRLEEARFLLENMKTAAGID--PDVVTYSIVVAGYSRAKRFVEAAEFI 388

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGK-------------------------------TE 185
            EM+  N  PN VT+S LI+GL K+G+                               TE
Sbjct: 389 QEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTE 448

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+ +L+EM  + + P+  T+  VI  LC++   DEA++L + M   G  P  V Y  LL
Sbjct: 449 EALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508

Query: 246 NGFCKLRRVDEALALL--------RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            GF +  R++ A  L         +S      VP   ++S LI GL +A+  D+A A   
Sbjct: 509 EGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVE 567

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++   + EP       ++ GL  AG+ ++A KL++ + + G+
Sbjct: 568 ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 214/400 (53%), Gaps = 16/400 (4%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +A+   MV   C P++VT+ +++NGL K G T++A  +L++M Q  + P    Y  +I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+    D+A  LF +M+  G  P+ V Y++L++  C   R  +A  LL    +    P 
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + ++S LID   +  +  EA   Y +M +  I+P +V Y  +I G     ++ +A ++  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M  +   PD   YN LIKGFC    +++   +  E+ +R  + NT T+ ILI G+ + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRL 451
             D AQ++F +M   G  P++  +N L+DGLCK G+LEKA ++F  ++  K  PT++   
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY--- 297

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +   M+E  C AG +   + +   L+  G  PD++ YN++I+GFC+ G+
Sbjct: 298 -----------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 346

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLING-LQRVDREEDA 550
              A  LFKE++  G  P+S  Y TLI   L+  DRE  A
Sbjct: 347 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 15/392 (3%)

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + ++D M  +G  P+  TY +V++GLC+    D A+ L  KM+     P  + YN +++G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK + +D+AL L +  E  G  P + +YS LI  L    R+ +A      M E KI PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V  +  +I    + GK+ +A KL  +M +R I P    Y++LI GFC    LD+A+ +  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   P+  T+  LI G C+   V++  ++F +M + G   +   +N LI GL +AG
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           + + A  +F +M   G  P +               +  T+++  C  G + KA  +   
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIM--------------TYNTLLDGLCKNGKLEKAMVVFEY 286

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L  S   P I TYN +I G CK G +     LF  L LKG++PD V Y T+I+G  R   
Sbjct: 287 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 346

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           +E+A  +F +M ++G  P+   Y +L+    R
Sbjct: 347 KEEADALFKEMKEDGTLPNSGCYNTLIRARLR 378



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 215/421 (51%), Gaps = 17/421 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQPD+  Y  V+N   ++    LA  +  +M +    P ++ ++ +I+GL K    + A+
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +  EM  +GI PN  TY+ +IS LC   R  +A RL   M +   +PD   ++AL++ F
Sbjct: 72  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K  ++ EA  L     K    P + +YS LI+G     R DEA   +  M  +   PDV
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I+G  +  +V++ M++  +M +RG+V +T  YN LI+G    G  D A+ +  E
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN  T+  L+ G+C+NG ++ A  +F  ++++   P++  +N +I+G+CKAG+
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +E    LF  + + G  P              D  +  TM+  +C  G   +A  +  ++
Sbjct: 312 VEDGWDLFCNLSLKGVKP--------------DVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ--RVD 545
            E G LP+   YN+LI    + G+   + +L KE++  G   D+ T G + N L   R+D
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLD 417

Query: 546 R 546
           +
Sbjct: 418 K 418



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 194/372 (52%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            V++ L K    DL +  L+++  G +     ++  +I G  K    + AL  F +M+  
Sbjct: 21  VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 80

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             +P+V  Y+++++       +  A  +  +M++    P++ TFS LI+   K GK   A
Sbjct: 81  GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 140

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+ DEM +R I P+  TY+ +I+G C  +R DEA ++F  M    C PD V YN L+ G
Sbjct: 141 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 200

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +RV+E + + R   + G V    +Y+ LI GLF+A   D A   +++M  + + P+
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++ Y  ++ GL + GK++ AM +   ++   + P  Y YN +I+G C  G ++    L  
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   P+   +  +I G CR G  ++A  LF +M++ G  P+ G +N LI    + G
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380

Query: 428 ELEKANLLFYKM 439
           + E +  L  +M
Sbjct: 381 DREASAELIKEM 392



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 221/488 (45%), Gaps = 90/488 (18%)

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           +AL+      G  P L +Y  +++GL +    D A+    KM + K+EP V++Y  +I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L +   + DA+ L  +M  +GI P+   Y++LI   C+ G    A  L  ++ +R   P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             TF+ LI    + G + +A+KL+++M K    PS+  +++LI+G C    L++A  +F 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF- 179

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
                                      + MV ++C                     PD++
Sbjct: 180 ---------------------------EFMVSKHC--------------------FPDVV 192

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN+LI GFCK   +   +++F+E+  +GL  ++VTY  LI GL +    + A  IF +M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
             +G  P+   Y +L+   C+  K   A  ++                   E+LQ+ ++E
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-------------------EYLQRSKME 293

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
             I                 Y I + G+C+ G+V++  ++F  L   K +   P  V   
Sbjct: 294 PTIY---------------TYNIMIEGMCKAGKVEDGWDLFCNL-SLKGV--KPDVVAYN 335

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            +I G C++G  + A  +F    ++G +      N L+R+ L  +D  +  +  L+  M+
Sbjct: 336 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL--RDGDREASAELIKEMR 393

Query: 735 SVGYDLDA 742
           S G+  DA
Sbjct: 394 SCGFAGDA 401



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 1/368 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D       E+ +  +      +  LIS     G    A      M E
Sbjct: 55  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+ ++A+++   ++   + A  +Y EMVK +  P+IVT+S LING     + + 
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M + M  +   P+  TY  +I G C+  R +E   +F +M   G   + V YN L+ 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +    D A  + +    DG  P + +Y+ L+DGL +  + ++A   +  +   K+EP
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +  Y +MI G+ +AGKV+D   L  ++  +G+ PD   YN +I GFC  G  ++A +L 
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +  +LPN+  +  LI    R+G  + + +L  +M   G F        L+  +   
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHD 413

Query: 427 GELEKANL 434
           G L+K+ L
Sbjct: 414 GRLDKSFL 421



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 40/256 (15%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  + G   F   ++R  + +  + + +I  L +    D+  +   E+ S  V     
Sbjct: 203 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 262

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G  K G  EKA+  F  ++    +P +Y YN                      
Sbjct: 263 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN---------------------- 300

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                        ++I G+ K+GK E    +   ++ +G+ P+   Y  +ISG C+    
Sbjct: 301 -------------IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 347

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD-EALA-LLRSFEKDGFVPRLGSYS 277
           +EA  LF +MK+ G  P+   YN L+    +LR  D EA A L++     GF     +  
Sbjct: 348 EEADALFKEMKEDGTLPNSGCYNTLIRA--RLRDGDREASAELIKEMRSCGFAGDASTIG 405

Query: 278 CLIDGLFRAKRYDEAY 293
            L+  +    R D+++
Sbjct: 406 -LVTNMLHDGRLDKSF 420


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 196/735 (26%), Positives = 314/735 (42%), Gaps = 89/735 (12%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAV-------------------ISMLLKPNGF----- 79
           P++   FF WA  R     F+ N A+                   ++ +  PN F     
Sbjct: 4   PELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGIL 63

Query: 80  ----------DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
                     D+  Q L+E++S      + V   L+ G    G   +ALE F  M + DC
Sbjct: 64  IRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DC 122

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PDV  Y A+++   +   F  A  +  EMV   C P+ VTFS LI+GL K G  E A +
Sbjct: 123 APDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFR 182

Query: 190 MLDEMTQRGILPNKFTYTIVISGLC-QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +L+++ QRG+  +   +  +I  LC + N  + A ++   +   G +P  + +N ++NGF
Sbjct: 183 VLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF 242

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK + +D A  LL    + G VP + +++ LI GL +A R  EA     KM      P+V
Sbjct: 243 CKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNV 302

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I GL + G+V DA +L   M  R   P+   +N LI G C    +++AR L   
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHR 362

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +    P+  T+  LI G+C++  VD+A +LF  + ++G                    
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG-------------------- 402

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +  AN + Y        TLF          H  A+L  M +          A +I   L 
Sbjct: 403 VSAANAVTYS-------TLF----------HGYAALGRMAD----------ACRIFSMLV 435

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  PD+ TY SLI  +CK       ++L +E+  KG  P   T   ++ GL   +  E
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-- 606
            A ++F  M   GCT    +Y  ++    R  K   A ++  Q +     + + S  +  
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 607 --IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             +E   Q G+ ++A Q L +M  +     ++ Y   L GL +  +  EA  +F  +V  
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
                  +   +I  LC    +D A ++     K G       CN L+    + K  +  
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG--YCKSGRAD 673

Query: 725 HAYHLLCRMKSVGYD 739
            A  LL  M   G +
Sbjct: 674 LARKLLEEMTEAGLE 688



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 158/587 (26%), Positives = 272/587 (46%), Gaps = 46/587 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++  L K   FD     L E+ +   +  +  F  LI G  K G  E+A      + +
Sbjct: 130 TALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189

Query: 127 FDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                 D      +  +  +     LA  V   ++     P ++ F+L+ING  K+   +
Sbjct: 190 RGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A K+L+ M ++G +PN FT+TI+I+GLC+ NR  EA +L  KM   GCSP+ V Y+ ++
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVI 309

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK  +VD+A  L +  E+    P + +++ LIDGL +AKR +EA   Y +M E    
Sbjct: 310 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 369

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VPDTYCYNALIKGFCDLGLLDQARS 364
           PD++ Y  +I GL ++ +V +A +L   + E G+   +   Y+ L  G+  LG +  A  
Sbjct: 370 PDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR 429

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +   +  +   P+  T+T LI   C+     +  +L  +M   G  P V   +A++ GL 
Sbjct: 430 IFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLF 489

Query: 425 KAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRV--HDKA----------------- 462
           +    E+A  LF  M       +  ++  + +G  R   HDKA                 
Sbjct: 490 EGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNP 549

Query: 463 ---SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              ++  +VE  C  G    A ++L +++E G    + +YN L++G  ++   + A ++F
Sbjct: 550 SSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF 609

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +   G  P+  T   +I+ L    + +DA+ +  +M + GC P      +L+   C+ 
Sbjct: 610 EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCK- 668

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLE 625
                            SGR D + K +EE  + G E  +    LLE
Sbjct: 669 -----------------SGRADLARKLLEEMTEAGLEPNDTTHDLLE 698



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 4/324 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMK 125
           +++I  L K    D  +Q    +    VS  + V +  L  GY  +G    A   F  + 
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +    PD+  Y +++    +    +  + +  EM      P + T S ++ GL +   TE
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF---LKMKDSGCSPDFVAYN 242
            AI++ D M  RG   +   Y +V+ G+ + ++ D+A  +    +  +D   +P   A +
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           AL+   C++ + D+A  LL    + GF   + SY+ L+ GL R +R+DEA   +  M   
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSA 615

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P++    V+I  L  A KV DA +L+  M + G  PD    N LI G+C  G  D A
Sbjct: 616 GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLA 675

Query: 363 RSLQVEIWKRDSLPNTHTFTILIC 386
           R L  E+ +    PN  T  +L C
Sbjct: 676 RKLLEEMTEAGLEPNDTTHDLLEC 699



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 171/394 (43%), Gaps = 71/394 (18%)

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +CR     +A  LF       C P+   +  LI G   AG+L+ A  L  +M+       
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSG---- 87

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                +G   VH      T+++  C AG + +A +    +A+    PD++TY +L++  C
Sbjct: 88  ----FEGNAVVH-----TTLMKGLCDAGRVVEALEHFRAMAKDC-APDVMTYTALVHALC 137

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G  + A  + +E+  +G  PD+VT+ TLI+GL +   EE AFR+   + Q G   S A
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197

Query: 568 VYKSLMTWSCRR----------------RKFS---LAFSLWLQYLRDISGRD-DESMKSI 607
            +++++   C +                + F+   L F+L +        +D D + K +
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF--CKAKDLDSAYKLL 255

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECK 665
           E  ++KG V N                   +TI + GLC+  +V EA  +   +V   C 
Sbjct: 256 EVMIEKGCVPNVF----------------TFTILITGLCKANRVGEAQQLLEKMVMGGCS 299

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLRSLLFS---KD 720
             V   S V  I+GLCK+G +D A ++F        ++  R C  N +  ++L     K 
Sbjct: 300 PNVVTYSTV--INGLCKQGQVDDAYELFQ-------LMERRNCPPNVVTHNILIDGLCKA 350

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
            +   A  L  RM+  G   D   Y    SL+ G
Sbjct: 351 KRIEEARQLYHRMRETGCAPDIITY---NSLIDG 381


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 239/485 (49%), Gaps = 40/485 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-----KQLFLLALA 154
           +F  L+  Y + GD   A +   KM +  CQP   +YN ++          K +  LA  
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
            Y EM++   + N V  S     L   GK E A  ++ EM  +G +P+  TY+ VI  LC
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLC 233

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             ++ ++A++LF +MK +G +PD   Y  L++ FCK   +++A       E+DG  P + 
Sbjct: 234 NASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LI    ++++  +A   Y  M  +   P++V Y  +I GL +AGK++ A ++   M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353

Query: 335 RERGI-VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           ++  + +PD   +  ++ G                     + PN  T+  L+ G+C+   
Sbjct: 354 KKENVEIPDVDMHFRVVDG-------------------ASNEPNVFTYGALVDGLCKAYQ 394

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V +A+ L   M   GC P+  +++ALIDG CKAG+L++A  +F  M E G +P ++    
Sbjct: 395 VKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVY---- 450

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +  +++++      +  A K+L ++ E+   P+++ Y  +I+G CKVG  
Sbjct: 451 ----------TYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 500

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A KL   ++ KG  P+ VTY  +I+G  +  R E    +  QM   GC P+   Y+ L
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560

Query: 573 MTWSC 577
           +   C
Sbjct: 561 INHCC 565



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 250/534 (46%), Gaps = 10/534 (1%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD  +Y  +++      LF  A+     M   +CLPN++T+ +L+ G     K     ++
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M   G  P+   +  ++   C+      AY+L  KM   GC P +V YN L+ G C 
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 251 LRR-----VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
                   +D A        + G V    + S     L    ++++AY   R+M  +   
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD   Y  +I  L  A KV+ A +L  +M+  GI PD Y Y  LI  FC  G ++QAR+ 
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNW 279

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+ +    PN  T+T LI    ++  V  A +++  M   GC P++  + ALIDGLCK
Sbjct: 280 FDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCK 339

Query: 426 AGELEKANLLFYKMEIGK----NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           AG++EKA+ ++  M+       +  +  R+  G +   +  +   +V+  C A  + +A 
Sbjct: 340 AGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEAR 399

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  ++  G  P+ + Y++LI+G CK G ++ A ++F  +   G  P+  TY +LI+ L
Sbjct: 400 DLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL 459

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  R + A ++  +M +N C P+  +Y  ++   C+  K   A+ L +         + 
Sbjct: 460 FKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519

Query: 602 ESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            +  + I+ F + G VE  ++ L +M  K        Y + +   C  G + EA
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 235/509 (46%), Gaps = 61/509 (11%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI  L   +  +  +Q   E++   ++    V+  LI  + K G  E+A   F +
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C P+V  Y A+++   + +    A  VY  M+   C PNIVT++ LI+GL K+GK
Sbjct: 283 MERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGK 342

Query: 184 TEVAIKMLDEMTQRGIL-----------------PNKFTYTIVISGLCQINRADEAYRLF 226
            E A ++   M +  +                  PN FTY  ++ GLC+  +  EA  L 
Sbjct: 343 IEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLL 402

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   GC P+ V Y+AL++G CK  ++DEA  +  +  + G+ P + +YS LID LF+ 
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           KR D A     KM E    P+VV+Y  MI GL + GK  +A KL+  M E+G  P+   Y
Sbjct: 463 KRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTY 522

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            A+I GF   G +++   L  ++  +   PN  T+ +LI   C  G++D+A KL  +M++
Sbjct: 523 TAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582

Query: 407 -------AG--------------------------CFPSVGMFNALIDGLCKAGELEKAN 433
                  AG                            P   ++  LID   KAG LE A 
Sbjct: 583 TYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIA- 641

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                +E+ +  + F   S     +H      T++E    A    KA+++   +   G++
Sbjct: 642 -----LELNEELSSFSPFSAANQNIH-----ITLIENLSLAHKADKAFELYADMISRGSI 691

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKEL 522
           P++     LI G  +V     AL+L   +
Sbjct: 692 PELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 244/531 (45%), Gaps = 38/531 (7%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           F+  +  + E+ S      +  +  +I         EKA + F +MK     PDVY+Y  
Sbjct: 203 FEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTT 262

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   +      A   + EM +  C PN+VT++ LI+   KS K   A ++ + M  +G
Sbjct: 263 LIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKG 322

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS---------------GCS--PDFVAY 241
             PN  TYT +I GLC+  + ++A +++  MK                 G S  P+   Y
Sbjct: 323 CTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTY 382

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            AL++G CK  +V EA  LL+S   +G  P    Y  LIDG  +A + DEA   +  M E
Sbjct: 383 GALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLE 442

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              +P+V  Y  +I  L +  ++  A+K+LS M E    P+   Y  +I G C +G  D+
Sbjct: 443 CGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 502

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L V + ++   PN  T+T +I G  ++G V+   +L  +M   GC P+   +  LI+
Sbjct: 503 AYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             C  G L++A+ L  +M+     T + R   G  +V +  + + +   Y +        
Sbjct: 563 HCCSTGLLDEAHKLLEEMK----QTYWPRHVAGYRKVIEGFNREFIASLYLS-------- 610

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT----YGTL 537
               +++E+ ++P    Y  LI+ F K G +  AL+L +EL      P S      + TL
Sbjct: 611 ---FEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELS--SFSPFSAANQNIHITL 665

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           I  L    + + AF ++  M   G  P  ++   L+    R  ++  A  L
Sbjct: 666 IENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQL 716



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           C    L ++ ++ EA +   K   E+  PD VLY  MI GL EA   ++AM  L+ MR  
Sbjct: 15  CFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRAS 71

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
             +P+   Y  L+ G  +   L + + +   +      P+   F  L+   CR+G    A
Sbjct: 72  SCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYA 131

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            KL  KM + GC P   ++N LI G+C + E  K  L   +   G+       + + G  
Sbjct: 132 YKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE-------MLEAG-V 183

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           V +K ++       C  G   KAY ++ ++   G +PD  TY+ +I   C    +  A +
Sbjct: 184 VLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+E++  G+ PD   Y TLI+   +    E A   F +M ++GC P+   Y +L+    
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL------------L 624
           + RK S A  ++   L      +  +  + I+   + G++E A Q              +
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363

Query: 625 EMDFKL-----NDFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVE-CKAIVTPPSCV--K 675
           +M F++     N+  +  Y   + GLC+  QVKEA ++  S+ VE C+    P   V   
Sbjct: 364 DMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCE----PNHVVYDA 419

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           LI G CK G LD A +VF   L+ G+   P V  Y
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTMLECGY--DPNVYTY 452


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 251/545 (46%), Gaps = 45/545 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +LL  N   +      E+ S  +S     F V++     V + + A    
Sbjct: 199 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 258

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M    C P+  +Y  +++   +       L +  EM+ + C+P++ TF+  I+GL K 
Sbjct: 259 KDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKM 318

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------- 228
            +   A K++D M  RG  PN FTY +++ GLC++ + DEA  L  K             
Sbjct: 319 LRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLI 378

Query: 229 -------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                              M   GC PD   YN L+ G CK   +  A  L+   +  G 
Sbjct: 379 NGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC 438

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ LID   +  R +EA     +M  + +  + V Y  +I  L +  KV+DA+ 
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  DM  +G  PD + +N+LI G C +   ++A  L  ++     + NT T+  LI    
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A KL N M   GC      +N LI  LC+AG +EK   LF  M          
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM---------- 608

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            +S+G N   +  S   ++   C  G I  A + L  +   G  PDI+TYNSLING CK 
Sbjct: 609 -MSKGLNP--NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 665

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G    AL LF +LQ++G+ PD++TY TLI+   +    +DA  +  +   +G  P+   +
Sbjct: 666 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 725

Query: 570 KSLMT 574
             L++
Sbjct: 726 YILVS 730



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 280/604 (46%), Gaps = 39/604 (6%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY------EMVKL--------N 163
           ++  G   EF     + +      I FR+ LF+L +  Y       +  +L        +
Sbjct: 136 IDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYS 195

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P   +++++++ L      +V   +  EM  +GI P  +T+ +V+  LC +N  D A 
Sbjct: 196 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 255

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   M   GC P+ + Y  L++   K+ RV+E L LL      G +P + +++  I GL
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R  EA     +M      P+   YGV++ GL   GKV +A  LL+ +      P+ 
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNV 371

Query: 344 YCYNALIKGFCDLGLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             +N LI G+   G LD+A+++  E +      P+  T+  LI G+C+ G +  A++L N
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M+  GC P+V  +  LID  CK G LE+A  +  +M  GK   L            +  
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLAL------------NAV 478

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++   C    +  A  +   ++  G  PDI T+NSLI G CKV     AL L++++
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 538

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
            L+G+  +++TY TLI+   R    ++A ++   M   GC      Y  L+   CR    
Sbjct: 539 LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNI 598

Query: 583 SLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
               +L+   + + ++  +      I    + G +++A++ L +M  +     +  Y   
Sbjct: 599 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSL 658

Query: 642 LIGLCQDGQVKEALNIFSVL-VE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           + GLC+ G+ +EALN+F  L VE  C   +T  +   LI   CK G  D A  +    + 
Sbjct: 659 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNT---LISWHCKEGMFDDAHLLLSRGVD 715

Query: 699 NGFI 702
           +GFI
Sbjct: 716 SGFI 719



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 214/416 (51%), Gaps = 20/416 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + VL+ G  ++G  ++A     K+      P+V ++N ++N    +     A AV +
Sbjct: 340 SFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMH 395

Query: 158 E-MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           E M+ + C P+I T++ LI GL K G    A ++++EM  +G  PN  TYTI+I   C+ 
Sbjct: 396 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 455

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R +EA  +  +M   G + + V YN L++  CK  +V +AL +       G  P + ++
Sbjct: 456 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 515

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI GL +  +++EA   Y+ M  E +  + + Y  +I      G +++A+KL++DM  
Sbjct: 516 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 575

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG   D   YN LIK  C  G +++  +L  ++  +   PN  +  ILI G+CR G +  
Sbjct: 576 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 635

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGG 455
           A +    M   G  P +  +N+LI+GLCK G  ++A  LF K+++ G  P          
Sbjct: 636 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP---------- 685

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               D  +  T++  +C  G+   A+ +L +  +SG +P+ +T+  L++ F K G+
Sbjct: 686 ----DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 9/387 (2%)

Query: 57  RKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R  LR F  NS    +L+    +    D     L+++ + NV +    F  LI+GY   G
Sbjct: 330 RMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRG 385

Query: 113 DCEKALESFGK-MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
             ++A     + M    C PD++ YN ++    +K   + A  +  EM    C PN++T+
Sbjct: 386 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI+   K G+ E A  +LDEM+ +G+  N   Y  +IS LC+  +  +A  +F  M  
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC PD   +N+L+ G CK+ + +EAL L +    +G +    +Y+ LI    R     E
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A      M       D + Y  +I+ L  AG ++  + L  DM  +G+ P+    N LI 
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G +  A     ++  R   P+  T+  LI G+C+ G   +A  LF+K++  G  P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK 438
               +N LI   CK G  + A+LL  +
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLLLSR 712



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 254/579 (43%), Gaps = 57/579 (9%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            + +LI+ L  +G+ +    +L +M Q GI+  +  + +++    +     +A RL L M
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 230 KDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +    C P F +YN +L+             +       G  P + ++  ++  L     
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A A  + M      P+ ++Y  +I  LS+ G+V + +KLL +M   G +PD   +N 
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            I G C +  + +A  L   +  R   PN+ T+ +L+ G+CR G VD+A+ L NK+    
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 368

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQT 466
             P+V +FN LI+G    G L++A  + ++  + +G  P +F              +  T
Sbjct: 369 --PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF--------------TYNT 412

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G +  A +++ ++   G  P++ITY  LI+ FCK G +  A  +  E+  KG
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L  ++V Y  LI+ L + ++ +DA  +FG M   GC P    + SL+   C+  KF  A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L+                  ++ L +G + N I                 Y   +    
Sbjct: 533 GLY------------------QDMLLEGVIANTIT----------------YNTLIHAFL 558

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G ++EAL + + ++     +   +   LI  LC+ G ++  + +F   +  G      
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 618

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            CN L+  L  + + +  HA   L  M   G   D   Y
Sbjct: 619 SCNILINGLCRTGNIQ--HALEFLRDMIHRGLTPDIVTY 655



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
             LDE+    +++ +  +  LIS   K    + AL  FG M    C+PD++ +N+++   
Sbjct: 463 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +   F  AL +Y +M+    + N +T++ LI+   + G  + A+K++++M  RG   + 
Sbjct: 523 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I  LC+    ++   LF  M   G +P+ ++ N L+NG C+   +  AL  LR 
Sbjct: 583 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P + +Y+ LI+GL +  R  EA   + K+  E I PD + Y  +I    + G 
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
             DA  LLS   + G +P+   +  L+  F   G
Sbjct: 703 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 238/455 (52%), Gaps = 14/455 (3%)

Query: 120 SFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           S  +  EF+  +PD    N ++N   +      + +V+ +++K    P+ VTF++LI GL
Sbjct: 79  SLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGL 138

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
              G+   A+   D++  +G   ++ +Y  +I+GLC++     A +L  ++      P+ 
Sbjct: 139 CLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNV 198

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y+ +++  CK + V++A  L          P + +YS LI G     +   A   + +
Sbjct: 199 VMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNR 258

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  + I P+V  + ++I G  + GKV++A  +L+ M ++ +  D   YN+L+ G+C +  
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQ 318

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +++A+SL   + +R   P+  +++I+I G C+  MVD+A KLF +M     FP+V  +N+
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L+DGLCK+G    A  L  +M     P+  +             +  ++++  C    + 
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNII-------------TYNSILDAICKNNHVD 425

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KA  +L ++ E G  PDI TY  LING CKVG ++ A K+F++L +KG  P+  TY +LI
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           NG       ++   +  +M  NGC P+   Y+ L+
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 191/337 (56%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  +VG+ + A++   ++     +P+V +Y+ +++   + +L   A  +Y EMV   
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT+S LI+G    GK + A+ + + M    I PN +T++I+I G C+  +  EA 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M       D V YN+L++G+C +++V++A +L     + G  P + SYS +I+G 
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K  DEA   + +M  ++I P+VV Y  ++ GL ++G+   A++L+ +M +RG   + 
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN+++   C    +D+A  L  +I ++   P+  T+T+LI G+C+ G +DDAQK+F  
Sbjct: 409 ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFED 468

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +   G  P++  + +LI+G C  G  ++   +  KM+
Sbjct: 469 LLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 224/457 (49%), Gaps = 23/457 (5%)

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K N +P  + F  ++  L K+ + + A+ +  +M   GI P+  T  ++++   Q+    
Sbjct: 51  KNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            ++ +F K+   G  PD V +  L+ G C    V +AL         GF     SY  LI
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLI 170

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL R      A    R++  + + P+VV+Y  +I  + +   V DA  L  +M  + I 
Sbjct: 171 NGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRIS 230

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y++LI GFC +G L  A  L   +   +  PN +TF+ILI G C+ G V +A+ +
Sbjct: 231 PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNV 290

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF----------- 448
              M K      V  +N+L+DG C   ++ KA  LF  M + G  P ++           
Sbjct: 291 LAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCK 350

Query: 449 LRLSQGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           +++     ++ ++           +  ++V+  C +G    A +++ ++ + G   +IIT
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YNS+++  CK  +++ A+ L  +++ KG++PD  TY  LINGL +V R +DA ++F  + 
Sbjct: 411 YNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             G +P+   Y SL+   C +  F    ++ L  ++D
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAM-LSKMKD 506



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 4/332 (1%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + FDLY + + +  S +V   S     LISG+  VG  + A++ F +M   +  P+VY +
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSS----LISGFCVVGKLKYAVDLFNRMISDNINPNVYTF 271

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           + +++   ++     A  V   M+K N   ++VT++ L++G     +   A  + + M Q
Sbjct: 272 SILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+ P+ ++Y+I+I+G C+I   DEA +LF +M      P+ V YN+L++G CK  R   
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSC 391

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           AL L+      G    + +Y+ ++D + +    D+A     K+ E+ I+PD+  Y V+I 
Sbjct: 392 ALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLIN 451

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G++ DA K+  D+  +G  P+ Y Y +LI GFC+ G  D+  ++  ++     +P
Sbjct: 452 GLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIP 511

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           N  T+ ILI  +      D A+KL  +M   G
Sbjct: 512 NAITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 220/499 (44%), Gaps = 51/499 (10%)

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           R   K+  +P    +  ++  L +AK+Y  A +  ++M    I+PD +   +++   S+ 
Sbjct: 47  RLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQL 106

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ---------ARSLQVEIWKR 372
           G +K +  + + + ++G  PD   +  LIKG C  G + +         A+  Q++    
Sbjct: 107 GHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY 166

Query: 373 DSL--------------------------PNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            +L                          PN   ++ +I  MC++ +V+DA  L+ +M  
Sbjct: 167 GTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS 226

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
               P V  +++LI G C  G+L+ A  LF +M     NP ++              +  
Sbjct: 227 KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVY--------------TFS 272

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ +C  G + +A  +L  + +     D++TYNSL++G+C V  +N A  LF  +  +
Sbjct: 273 ILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQR 332

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+ PD  +Y  +ING  ++   ++A ++F +M      P+   Y SL+   C+  + S A
Sbjct: 333 GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCA 392

Query: 586 FSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  +        +  +  SI +   +   V+ AI  L ++  K     +  YT+ + G
Sbjct: 393 LELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLING 452

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           LC+ G++ +A  +F  L+         +   LI+G C +G+ D  + +      NG I  
Sbjct: 453 LCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512

Query: 705 PRVCNYLLRSLLFSKDNKK 723
                 L+ SL    +N K
Sbjct: 513 AITYEILIHSLFEKDENDK 531



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 127/237 (53%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V    KA   F  M +    PDV+ Y+ ++N   + ++   A+ ++ EM    
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT++ L++GL KSG+T  A++++DEM  RG   N  TY  ++  +C+ N  D+A 
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  K+K+ G  PD   Y  L+NG CK+ R+D+A  +       G+ P + +Y+ LI+G 
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                +DE  A   KM +    P+ + Y ++I  L E  +   A KLL +M  RG++
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 159/341 (46%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           +T+   + K K     F  +     ++      + S++IS               + + S
Sbjct: 202 STIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMIS 261

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            N++     F +LI G+ K G   +A      M + + + DV  YN++++     +    
Sbjct: 262 DNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNK 321

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +++  M +    P++ ++S++ING  K    + A+K+ +EM  + I PN  TY  ++ 
Sbjct: 322 AKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD 381

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+  R   A  L  +M D G   + + YN++L+  CK   VD+A+ LL   ++ G  P
Sbjct: 382 GLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQP 441

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LI+GL +  R D+A   +  +  +   P++  Y  +I G    G   + + +L
Sbjct: 442 DIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAML 501

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           S M++ G +P+   Y  LI    +    D+A  L  E+  R
Sbjct: 502 SKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 38/300 (12%)

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           LF RL    N +        ++     A     A  +  Q+  +G  PD IT N L+N F
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVT--------------------------------- 533
            ++G+I  +  +F ++  KG  PD+VT                                 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 534 --YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             YGTLINGL RV   + A ++  ++      P+  +Y +++   C+ +  + AF L+ +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 592 YLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            +      D  +  S I  F   G+++ A+     M     +  +  ++I + G C++G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V+EA N+ +V+++    +   +   L+ G C    ++ A  +F    + G  + P V +Y
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG--VTPDVWSY 341



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 72/144 (50%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R +  +  + ++++  + K N  D     L +++   +      + VLI+G  KVG  + 
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A + F  +      P++Y Y +++N    K  F   LA+  +M    C+PN +T+ +LI+
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521

Query: 177 GLSKSGKTEVAIKMLDEMTQRGIL 200
            L +  + + A K+L EM  RG+L
Sbjct: 522 SLFEKDENDKAEKLLREMIARGLL 545


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 236/460 (51%), Gaps = 13/460 (2%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y  +L        F  AL ++  MV    LP+I+ F+ L++ ++K  + +V I + ++M 
Sbjct: 51  YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             GI P   T  IV+  +C  ++   A     KM   G  PD V + +LLNG+C   R++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +A+AL       GF P + +Y+ LI  L + +  + A   + +M      P+VV Y  ++
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL E G+  DA  LL DM +R I P+   + ALI  F  +G L +A+ L   + +    
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+  LI G+C  G++D+A+++F  ME+ GC+P+  ++  LI G CK+  +E    +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           FY+M            SQ G  V +  +   +++ YC  G    A ++  Q++     PD
Sbjct: 351 FYEM------------SQKG-VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I TYN L++G C  G +  AL +F+ ++ + +  + VTY  +I G+ ++ + EDAF +F 
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            +   G  P+   Y ++++  CRR     A SL+ +   D
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 228/454 (50%), Gaps = 13/454 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL+ F +M      P +  +  +L++  +   + + ++++ +M  L   P + T +++++
Sbjct: 67  ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            +  S +   A   L +M + G  P+  T+T +++G C  NR ++A  LF ++   G  P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V Y  L+   CK R ++ A+ L      +G  P + +Y+ L+ GL    R+ +A    
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R M + +IEP+V+ +  +I    + GK+ +A +L + M +  + PD + Y +LI G C  
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           GLLD+AR +   + +    PN   +T LI G C++  V+D  K+F +M + G   +   +
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
             LI G C  G  + A  +F +M   + P              D  +   +++  C  G 
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPP-------------DIRTYNVLLDGLCCNGK 413

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA  I   + +     +I+TY  +I G CK+G +  A  LF  L  KG++P+ +TY T
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +I+G  R     +A  +F +M ++G  P+ +VYK
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 238/493 (48%), Gaps = 31/493 (6%)

Query: 47  GFRFFI--WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           GF F+I  +++ RK LR+   N      L   +  DL+ + +    S  +  + D F  L
Sbjct: 40  GFCFWIRAFSSYRKILRNGLHN------LQFNDALDLFTRMV---HSRPLPSIID-FTRL 89

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           +S   K+   +  +  F +M+     P +   N V++          A     +M+KL  
Sbjct: 90  LSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF 149

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P++VTF+ L+NG     + E AI + D++   G  PN  TYT +I  LC+    + A  
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           LF +M  +G  P+ V YNAL+ G C++ R  +A  LLR   K    P + +++ LID   
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  +  EA   Y  M +  + PDV  YG +I GL   G + +A ++   M   G  P+  
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y  LI GFC    ++    +  E+ ++  + NT T+T+LI G C  G  D AQ++FN+M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDK 461
                 P +  +N L+DGLC  G++EKA ++F  M   E+  N   +  + QG       
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG------- 442

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                     C  G +  A+ +   L   G  P++ITY ++I+GFC+ G I+ A  LFK+
Sbjct: 443 ---------MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493

Query: 522 LQLKGLRPDSVTY 534
           ++  G  P+   Y
Sbjct: 494 MKEDGFLPNESVY 506



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 215/470 (45%), Gaps = 22/470 (4%)

Query: 238 FVAYNALL-NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           F +Y  +L NG   L+  ++AL L         +P +  ++ L+  + +  RYD   + +
Sbjct: 48  FSSYRKILRNGLHNLQ-FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M    I P +    +++  +  + +   A   L  M + G  PD   + +L+ G+C  
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             ++ A +L  +I      PN  T+T LI  +C+N  ++ A +LFN+M   G  P+V  +
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226

Query: 417 NALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
           NAL+ GLC+ G    A  L   M    I  N   F                  +++ +  
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF----------------TALIDAFVK 270

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + +A ++   + +    PD+ TY SLING C  G ++ A ++F  ++  G  P+ V 
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TLI+G  +  R ED  +IF +M Q G   +   Y  L+   C   +  +A  ++ Q  
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 594 RDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
              +  D  +   + + L   G+VE A+     M  +  D  +  YTI + G+C+ G+V+
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +A ++F  L          +   +I G C+RG +  A  +F    ++GF+
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 256/558 (45%), Gaps = 60/558 (10%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L K   F++  + +DE+     S        L+ G  K G  E+AL    ++ EF   P+
Sbjct: 307 LCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPN 366

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           +++YNA+++   + + F  A  ++  M K+   PN VT+S+LI+   + GK + A+  L 
Sbjct: 367 IFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLG 426

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM   G+ P+ + Y  +I+G C+      A  L  +M +    P  V Y +L+ G+C   
Sbjct: 427 EMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKG 486

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           ++++AL L       G VP + +++ L+ GLFRA    +A   + +M E  ++P+ V Y 
Sbjct: 487 KINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYN 546

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           VMI G  E G +  A + L++M E+GIVPDTY Y  LI G C  G   +A+     + K 
Sbjct: 547 VMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           +   N   +T L+ G CR G +++A  +   M   G    +  +  LIDG  K       
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKH------ 660

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA------SLQTMVEQYCTAGLIHKAYKILMQ 486
                     K+  +FL L +    +HD+          +M++     G   +A+ I   
Sbjct: 661 ----------KDRKVFLGLLK---EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 487 LAESGNLPDIITYNSLINGFCKVGNIN--------------------------------G 514
           +   G +P+ +TY ++ING CK G +N                                G
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVG 767

Query: 515 ALKLFKELQ---LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            +K   EL    LKGL  ++ TY  LI G  R  R E+A  +  +M  +G +P    Y +
Sbjct: 768 DMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTT 827

Query: 572 LMTWSCRRRKFSLAFSLW 589
           +++  CRR     A  LW
Sbjct: 828 MISELCRRNDVKKAIELW 845



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 175/680 (25%), Positives = 319/680 (46%), Gaps = 51/680 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
           SA++  L+K   F L  +  D++   NV +  DV+    +I    ++ D  +A E   +M
Sbjct: 196 SALLHGLVKFRHFGLAMELFDDMI--NVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +   C  ++  YN +++   +KQ    A+ +  ++      P++VT+  L+ GL K  + 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           EV ++M+DEM +    P++   + ++ GL +  + +EA  L  ++ + G SP+   YNAL
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL 373

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  CK R  DEA  L     K G  P   +YS LID   R  + D A ++  +M +  +
Sbjct: 374 IDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +P V  Y  +I G  + G +  A  L+++M  + + P    Y +L+ G+C  G +++A  
Sbjct: 434 KPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+  +  +P+ +TFT L+ G+ R G++ DA KLF +M +    P+   +N +I+G C
Sbjct: 494 LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYC 553

Query: 425 KAGELEKA-NLLFYKMEIGKNP---------------------TLFLRLSQGGNRVHDKA 462
           + G + KA   L   +E G  P                      +F+     GN   ++ 
Sbjct: 554 EEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++  +C  G + +A  +   +   G   D++ Y  LI+G  K  +    L L KE+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEM 673

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             +GL+PD V Y ++I+   +    ++AF I+  M   GC P+   Y +++   C+    
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKG--------EVENAI-QGLLEMDFKLNDF 633
           + A  L  +     S  +  +     + L KG        E+ NAI +GLL         
Sbjct: 734 NEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLA-------- 785

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
             A Y + + G C+ G+++EA  + + ++        P C+    +I  LC+R  +  A+
Sbjct: 786 NTATYNMLIRGFCRQGRMEEASELITRMI---GDGVSPDCITYTTMISELCRRNDVKKAI 842

Query: 691 DVFLYTLKNGFILRPRVCNY 710
           +++    + G  +RP    Y
Sbjct: 843 ELWNSMTEKG--IRPDRVAY 860



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 187/687 (27%), Positives = 316/687 (45%), Gaps = 61/687 (8%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS 95
           +I    +P++G RFF +    +    S AS   +I  L++ N   L+W     L++  + 
Sbjct: 77  LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQAN---LFWPASSLLQTLLLR 133

Query: 96  VV--SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            +  S+VF  L S Y K                FD     Y+         R +  L  +
Sbjct: 134 ALKPSEVFDALFSCYEKC--------KLSSSSSFDLLIQHYV---------RSRRVLDGV 176

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            V+   M K++ LP + T S L++GL K     +A+++ D+M   GI P+ + YT VI  
Sbjct: 177 LVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRS 236

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC++     A  + ++M+ +GC  + V YN L++G CK ++V EA+ + +        P 
Sbjct: 237 LCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPD 296

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y  L+ GL + + ++       +M   +  P       ++ GL + GKV++A+ L+ 
Sbjct: 297 VVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVK 356

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            + E G+ P+ + YNALI   C     D+A  L   + K    PN  T++ILI   CR G
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRG 416

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLF--- 448
            +D A     +M   G  PSV  +N+LI+G CK G++  A  L  +M   K  PT+    
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 449 ---------------LRLSQ---GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
                          LRL     G   V    +  T++     AGLI  A K+  ++AE 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P+ +TYN +I G+C+ GN++ A +   E+  KG+ PD+ +Y  LI+GL    +  +A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
                 + +  C  +   Y  L+   CR  K   A S+     +D+  R  +        
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV----CQDMGLRGVDLDLVCYGV 652

Query: 611 LQKGEVENAIQ----GLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
           L  G +++  +    GLL+   +++D  L P    YT  +    + G  KEA  I+ +++
Sbjct: 653 LIDGSLKHKDRKVFLGLLK---EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLA 689
               +    +   +I+GLCK G+++ A
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEA 736



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 218/437 (49%), Gaps = 15/437 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY   G   KAL  + +M      P +Y +  +L+  FR  L   A+ ++ EM + N
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN VT++++I G  + G    A + L+EM ++GI+P+ ++Y  +I GLC   +A EA 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
                +    C  + + Y  LL+GFC+  +++EAL++ +     G    L  Y  LIDG 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K         ++M +  ++PD V+Y  MI   S+ G  K+A  +   M   G VP+ 
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN-GMVDDAQKLFN 402
             Y A+I G C  G +++A  L  ++   +S+PN  T+   +  + +  G +  A +L N
Sbjct: 718 VTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN 777

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            + K G   +   +N LI G C+ G +E+A+ L  +M IG   +             D  
Sbjct: 778 AILK-GLLANTATYNMLIRGFCRQGRMEEASELITRM-IGDGVS------------PDCI 823

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  TM+ + C    + KA ++   + E G  PD + YN+LI+G C  G +  A +L  E+
Sbjct: 824 TYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 523 QLKGLRPDSVTYGTLIN 539
             +GL+P++ T  T I+
Sbjct: 884 LRQGLKPNTETSETTIS 900



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 144/296 (48%), Gaps = 2/296 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D L  GN  +    +  L+ G+ + G  E+AL     M       D+  Y  +++ + +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLK 659

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   + L +  EM      P+ V ++ +I+  SK+G  + A  + D M   G +PN+ T
Sbjct: 660 HKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK-LRRVDEALALLRSF 264
           YT VI+GLC+    +EA  L  KM+     P+ V Y   L+   K +  + +A+ L  + 
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI 779

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            K G +    +Y+ LI G  R  R +EA     +M  + + PD + Y  MI  L     V
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDV 838

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           K A++L + M E+GI PD   YN LI G C  G + +A  L+ E+ ++   PNT T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 36/253 (14%)

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           M + +   LP++ T ++L++G  K  +   A++LF ++   G+RPD   Y  +I  L  +
Sbjct: 181 MMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCEL 240

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
                A  +  QM   GC  +   Y  L+   C+++K   A  +     +D++G++    
Sbjct: 241 KDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIK----KDLAGKE---- 292

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
                              L+ D       +  Y   + GLC+  + +  L +   ++  
Sbjct: 293 -------------------LKPD-------VVTYCTLVCGLCKVQEFEVGLEMIDEMLRL 326

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           +   +  +   L+ GL KRG ++ A+++     + G      V N L+ SL   ++  + 
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE- 385

Query: 725 HAYHLLCRMKSVG 737
            A  L  RM  +G
Sbjct: 386 -AELLFDRMGKIG 397



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 55/112 (49%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+ + G  E+A E   +M      PD   Y  +++   R+     A+ ++  M
Sbjct: 789 TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSM 848

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            +    P+ V ++ LI+G   +G+   A ++ +EM ++G+ PN  T    IS
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 224/423 (52%), Gaps = 13/423 (3%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L+ +V  +++K+   PN++T + LI GL   G+   A++  D++   G   NK +Y  +I
Sbjct: 125 LSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLI 184

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +GLC++ +   A +L  ++      P+ V YN +++  CK++ V+EA  L       G  
Sbjct: 185 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 244

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +Y+ LI G     +  +A   + KM  E I P+V  + +++ G  +  ++K+A  +
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNV 304

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L+ M ++GI PD + YN+L+  +C +  +++A+ +   I +R   PN H+++I+I G C+
Sbjct: 305 LAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCK 364

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
              VD+A  LF +M      P V  +N+LIDGLCK G++  A  L  +M     P     
Sbjct: 365 IKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP----- 419

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                   HDK +  ++++  C    + KA  +L ++ + G  PDI TY +L++G CK G
Sbjct: 420 --------HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A  +F++L +KG   D   Y  +I G       +++  +  +M +NGC P+   Y+
Sbjct: 472 RLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYE 531

Query: 571 SLM 573
            ++
Sbjct: 532 III 534



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 241/494 (48%), Gaps = 15/494 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L+K N +        ++    ++    +  +LI+ + ++G    +     K+ +  
Sbjct: 78  ILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMG 137

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P+V     ++     K     AL  + ++V L    N V++  LINGL K G+T  A+
Sbjct: 138 YEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L  +  + + PN   Y  +I  +C++   +EA+ L+ +M   G SPD V YNAL++GF
Sbjct: 198 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C + ++ +A  L      +   P + +++ L+DG  + +R  EA      M ++ I+PDV
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  ++       +V  A  + + + +RG+ P+ + Y+ +I GFC +  +D+A +L  E
Sbjct: 318 FTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +   + +P+  T+  LI G+C+ G +  A KL ++M   G       +N+++D LCK  +
Sbjct: 378 MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 437

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++KA  L  KM + G  P              D  +  T+V+  C  G +  A  +   L
Sbjct: 438 VDKAIALLTKMKDEGIQP--------------DICTYTTLVDGLCKNGRLEDARIVFEDL 483

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G + D+  Y ++I GFC  G  + +L L  +++  G  P++VTY  +I  L   D  
Sbjct: 484 LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDEN 543

Query: 548 EDAFRIFGQMPQNG 561
           + A ++  +M   G
Sbjct: 544 DKAEKLLREMITRG 557



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 231/499 (46%), Gaps = 49/499 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  F  ++  L KS      + +  +M   GI  +    +I+I+   Q+ +   ++ +
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             K+   G  P+ +    L+ G C   ++ +AL         GF     SY  LI+GL +
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +   A    R++  + ++P+VV+Y  +I  + +   V +A  L S+M  +GI PD   
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YNALI GFC +G +  A  L  ++   +  PN +TF IL+ G C+   + +A+ +   M 
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           K G  P V  +N+L+D  C   E+ KA  +F  + + G NP +               S 
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI--------------HSY 355

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             M+  +C    + +A  +  ++  +  +PD++TYNSLI+G CK+G I+ ALKL  E+  
Sbjct: 356 SIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G+  D +TY ++++ L +  + + A  +  +M   G  P    Y +L+   C+      
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK------ 469

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                       +GR +++    E+ L KG +         +D  +       YT  + G
Sbjct: 470 ------------NGRLEDARIVFEDLLVKGYI---------LDVNI-------YTAMIQG 501

Query: 645 LCQDGQVKEALNIFSVLVE 663
            C  G   E+L++ S + E
Sbjct: 502 FCSHGLFDESLDLLSKMEE 520



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 248/529 (46%), Gaps = 52/529 (9%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           + Q+   P+ F +  ++  L + N       L  +M+ +G + D V  + L+N F +L +
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
              + ++L    K G+ P + + + LI GL    +  +A  ++ K+       + V YG 
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL + G+   A++LL  +  + + P+   YN +I   C + L+++A  L  E+  + 
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA- 432
             P+  T+  LI G C  G + DA  LFNKM      P+V  FN L+DG CK   L++A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           N+L   M+ G  P +F              +  +++++YC    ++KA  I   +++ G 
Sbjct: 303 NVLAMMMKQGIKPDVF--------------TYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+I +Y+ +I+GFCK+  ++ A+ LFKE+    + PD VTY +LI+GL ++ +   A +
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +  +M   G       Y S++   C+  +   A +L       ++   DE ++       
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL-------LTKMKDEGIQP------ 455

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
                                 +  YT  + GLC++G++++A  +F  L+    I+    
Sbjct: 456 ---------------------DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNI 494

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY-LLRSLLFSKD 720
              +I G C  G  D ++D+     +NG I  P    Y ++   LF KD
Sbjct: 495 YTAMIQGFCSHGLFDESLDLLSKMEENGCI--PNAVTYEIIICSLFDKD 541



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 178/333 (53%), Gaps = 4/333 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDLY     E+ S  +S     +  LISG+  VG  + A + F KM   +  P+VY +N
Sbjct: 231 AFDLY----SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   +++    A  V   M+K    P++ T++ L++      +   A  + + ++QR
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ PN  +Y+I+I G C+I + DEA  LF +M  +   PD V YN+L++G CKL ++  A
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L+      G      +Y+ ++D L +  + D+A A   KM +E I+PD+  Y  ++ G
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L + G+++DA  +  D+  +G + D   Y A+I+GFC  GL D++  L  ++ +   +PN
Sbjct: 467 LCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPN 526

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             T+ I+IC +      D A+KL  +M   G F
Sbjct: 527 AVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 198/462 (42%), Gaps = 57/462 (12%)

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           +++   ++ R + ++  +P +  +G ++  L ++      + L   M   GI  D    +
Sbjct: 52  KHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILS 111

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI  F  LG    + S+  +I K    PN  T T LI G+C  G +  A +  +K+   
Sbjct: 112 ILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVAL 171

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL-QT 466
           G   +   +  LI+GLCK G+   A  L  +++              G  V     +  T
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRRVD--------------GKLVQPNVVMYNT 217

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C   L+++A+ +  ++   G  PD++TYN+LI+GFC VG +  A  LF ++  + 
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           + P+  T+  L++G  +  R ++A  +   M + G  P    Y SLM   C  ++ + A 
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            ++                      Q+G   N                +  Y+I + G C
Sbjct: 338 HIF------------------NTISQRGVNPN----------------IHSYSIMIHGFC 363

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           +  +V EA+N+F  +  C  I+  P  V    LI GLCK G +  A+ +       G   
Sbjct: 364 KIKKVDEAMNLFKEM-HCNNII--PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                N +L +L   K+++   A  LL +MK  G   D C Y
Sbjct: 421 DKITYNSILDAL--CKNHQVDKAIALLTKMKDEGIQPDICTY 460



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 97/221 (43%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
             F   ++R    +  S S +I    K    D       E+   N+      +  LI G 
Sbjct: 338 HIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            K+G    AL+   +M +     D   YN++L+   +      A+A+  +M      P+I
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T++ L++GL K+G+ E A  + +++  +G + +   YT +I G C     DE+  L  K
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           M+++GC P+ V Y  ++         D+A  LLR     G 
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 181/757 (23%), Positives = 350/757 (46%), Gaps = 34/757 (4%)

Query: 2   SSTLNEVLTILDT-VTPIEPALEPL------LPFLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           +   N VL  L   +  +E  LE +      +P  +   + S +++T+      R  I A
Sbjct: 114 ADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERV-IAA 172

Query: 55  AKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
            +R + R +F++ + +I  + +    +   + L +++     V   +F  L+    + G 
Sbjct: 173 MRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGR 232

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            E AL    ++K    +PD+ +YN  ++   +     +A   ++E+      P+ V+++ 
Sbjct: 233 VEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTS 292

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +I  L K+G+   A ++  +M     +P  + Y  +I G     + + AY+L  ++K+ G
Sbjct: 293 MIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG 352

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C P  V++N++L    K R+VDEAL L  + +KD   P   +Y+ +ID L  A + +EAY
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAY 411

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               +M    + P+++   +M+  L +A K + A ++     +RG  P++  Y +LI G 
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGL 471

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              G +D A  L   +       N   +T LI     +G  +D  K+F +M + GC P +
Sbjct: 472 GKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDL 531

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            + N  +D + KAG++EK   +F  +             +G   + D  S   ++     
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDI-------------KGYGFLPDVRSYSILIHGLTK 578

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           AG   +   I   + + G   D   YN++++GFCK G ++ A ++ +E+++K + P   T
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVAT 638

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           YG++I+GL ++DR ++A+ +F +    G   +  VY SL+    +  +   A+ +  + +
Sbjct: 639 YGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 698

Query: 594 RDISGRDDESMKSIEEFLQKGEVEN----AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           +     +  +  S+ + L K E  N      Q + EM    N +    Y+I + GLC+  
Sbjct: 699 KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYT---YSILINGLCRVQ 755

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           +  +A   +  + +   +    +   +I GL K G +  A  +F     NG        N
Sbjct: 756 KYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFN 815

Query: 710 YLLRSLLFSKDNKKVHAYHLL--CRMKSVGYDLDACL 744
            L+  +  S  N+ + AYH+    R+K    ++ AC+
Sbjct: 816 ALIEGM--SHANRAIEAYHVFEETRLKGCRINVKACI 850



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 274/586 (46%), Gaps = 58/586 (9%)

Query: 189 KMLDEMTQRGI-LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           K+L+EM+  G  +PN     +V S L +  R D+A R+   M+     P F AY  L+  
Sbjct: 133 KVLEEMSVLGYGVPNPACADLV-SALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             + R+ + AL LLR  ++ G+   +  ++ L+  L R  R + A A   ++    +EPD
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +VLY V I    +AG V  A K   +++ +G+ PD   Y ++I   C  G L +A  L  
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++    ++P  + +  +I G    G  ++A KL +++++ GC PSV  FN+++  L K  
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++++A  LF  M+    P              + ++   +++  C AG + +AY I  ++
Sbjct: 372 KVDEALTLFEAMKKDAEP--------------NSSTYNIIIDMLCMAGKVEEAYMIRDEM 417

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +G  P+++T N +++  CK      A ++F+    +G  P+SVTY +LI+GL +    
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           +DA+R+F  M   G   +P VY SL+      R F +             GR ++  K  
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLI------RNFFM------------HGRKEDGHKIF 519

Query: 608 EEFLQKGEVENAIQGLLEMD--FKLNDFQ-----------------LAPYTIWLIGLCQD 648
           +E  ++G   +       MD  FK  D +                 +  Y+I + GL + 
Sbjct: 520 KEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKA 579

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           GQ +E  +IF  + +    +   +   ++ G CK G LD A +V L  +K   +  P V 
Sbjct: 580 GQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV-LEEMKVKRV-PPTVA 637

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
            Y       +K ++   AY L    KS G +L+  +Y    SL+ G
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVY---SSLIDG 680



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 253/538 (47%), Gaps = 63/538 (11%)

Query: 79  FDLYWQTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           F+  ++ LD+L+      SVVS  F  +++   K    ++AL  F  MK+ D +P+   Y
Sbjct: 338 FENAYKLLDQLKERGCIPSVVS--FNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTY 394

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N ++++         A  +  EM      PN++T +++++ L K+ K E A +M +  +Q
Sbjct: 395 NIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQ 454

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG  PN  TY  +I GL +    D+AYRLF  M D+G + + V Y +L+  F    R ++
Sbjct: 455 RGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED 514

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
              + +   + G  P L   +  +D +F+A   ++  A +  +      PDV  Y ++I 
Sbjct: 515 GHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIH 574

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL++AG+ ++   +   M+++G   D   YNA++ GFC  G LD+A  +  E+  +   P
Sbjct: 575 GLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPP 634

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T+  +I G+ +   +D+A  LF + +  G   +V ++++LIDG  K G +++A L+ 
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKA------SLQTMVEQYCTA----------GLI-- 477
            +M + G  P ++   S     V  +         Q+M E  C+           GL   
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754

Query: 478 ---HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK-------------- 520
              +KA+    ++ + G +P+++TY ++I G  KVGNI  A  LF+              
Sbjct: 755 QKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASF 814

Query: 521 ---------------------ELQLKGLRPDSVTYGTLINGLQRVD-REEDAFRIFGQ 556
                                E +LKG R +     +L++ L + +  E+ A   FG+
Sbjct: 815 NALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGE 872



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 44/480 (9%)

Query: 2   SSTLNEVLTILDTVTPIEPAL--------EPLLP-FLSKTTVTSVIMKTKNPQVGFRFFI 52
           SST N ++ +L     +E A           L P  L+   +   + K K  +  +  F 
Sbjct: 391 SSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFE 450

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            A++R    +  +  ++I  L K    D  ++  + +     +    V+  LI  ++  G
Sbjct: 451 TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHG 510

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E   + F +M    CQPD+ + N  ++  F+        A++ ++     LP++ ++S
Sbjct: 511 RKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYS 570

Query: 173 LLINGLSK-----------------------------------SGKTEVAIKMLDEMTQR 197
           +LI+GL+K                                   SGK + A ++L+EM  +
Sbjct: 571 ILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK 630

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            + P   TY  +I GL +I+R DEAY LF + K  G   + + Y++L++GF K+ R+DEA
Sbjct: 631 RVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEA 690

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +L    K G  P + +++ L+D L +A+  +EA   ++ M E K  P+   Y ++I G
Sbjct: 691 YLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILING 750

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L    K   A     +M+++G+VP+   Y  +I G   +G +  A SL          P+
Sbjct: 751 LCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPD 810

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             +F  LI GM       +A  +F +    GC  +V    +L+D L KA  LE+A ++ +
Sbjct: 811 AASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGF 870


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 244/471 (51%), Gaps = 21/471 (4%)

Query: 111 VGDCEKA-LESFGKMKEFDCQPDVYI-YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           + +C+K  + S   ++ FD      I +N +L    + + +    ++Y +M      PN 
Sbjct: 67  IHNCKKGNITSTQALQFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T ++LIN L    +    +  +  + +RG +P+  TYT +I GLC  +R  EA RLF++
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD------GFVPRLGSYSCLIDG 282
           M+  GC P+ V Y  L+ G C+   ++ AL L +              P + SY+ +ID 
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  ++ EA   + +M ++ + PDVV +  +I  L + G V +A K L  M  RGIVPD
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + + +LI+GFC +G LD A+ L + +  +   P+  ++T+LI G C+   V++A KL+N
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M + G +P +  F  L+ GL  AG++  A  LF  ++    P      S          
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICS---------- 416

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                ++  C  G + +A ++  +L       DI ++N LI+G CK   +  A +LF++L
Sbjct: 417 ---VFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +GL+PD VTY  +ING  +  + ++A  +F  M +NGCTP+   Y +L+
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALL 524



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 268/572 (46%), Gaps = 34/572 (5%)

Query: 7   EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN 66
           ++ + L T +P  P+  P +   +       + +  + Q G   FI   K+  + S  + 
Sbjct: 22  KLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQHGLPMFIHNCKKGNITSTQAL 81

Query: 67  SAVISMLLKPNGFDL----------YWQTLDELRSGNVSVVSDVFF---VLISGYYKVGD 113
                M+     F+L          Y Q     +  +++ +S  FF   +LI+    V  
Sbjct: 82  QFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNR 141

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
             + L +   +      PDV  Y +++     +     A  ++  M KL C PN+VT+  
Sbjct: 142 VREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGT 201

Query: 174 LINGLSKSGKTEVAIKMLDEMTQR------GILPNKFTYTIVISGLCQINRADEAYRLFL 227
           LI GL ++G   +A+K+  EM            PN F+Y I+I  LC+I +  EA RLF 
Sbjct: 202 LIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFN 261

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M D G  PD V ++AL++  CK   V EA   L +    G VP L +++ LI+G     
Sbjct: 262 EMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVG 321

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             D A   +  M  +  EPDV+ Y V+I G  +   V++AMKL ++M   G  PD   + 
Sbjct: 322 DLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFC 381

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            L+KG    G +  A+ L   + K  ++P N +  ++ + G+C+NG + +A +LFN+++ 
Sbjct: 382 VLLKGLFLAGKVGDAKKL-FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKS 440

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                 +  FN LIDGLCKA +LE A  LF K            LSQ G +  D  +   
Sbjct: 441 YNMKLDIESFNCLIDGLCKARKLETAWELFEK------------LSQEGLQ-PDVVTYCI 487

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           M+  +C  G +  A  +   + E+G  P+++TY++L++GF K   +   +KL  ++  K 
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           +   +  Y  + + + + ++  +   I  + P
Sbjct: 548 VSLAASIYTIVEDMVSKDEKCREWLDILQRFP 579



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/431 (22%), Positives = 186/431 (43%), Gaps = 50/431 (11%)

Query: 4   TLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKT---------KNPQVGFRFFIWA 54
           TLN ++  L  V  +   L  +   + +  +  V+  T                R FI  
Sbjct: 128 TLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM 187

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGN----VSVVSDVFF--VLISGY 108
            K     +  +   +I  L +    +L  +   E+ +G     ++   ++F   ++I   
Sbjct: 188 QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDEL 247

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            K+G  ++A   F +M +   +PDV  ++A+++   ++ + + A      M+    +P++
Sbjct: 248 CKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDL 307

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF+ LI G    G  + A ++   M  +G  P+  +YT++I G C+    +EA +L+ +
Sbjct: 308 FTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 367

Query: 229 MKDSGCSPDFVAYNAL-----------------------------------LNGFCKLRR 253
           M   G  PD   +  L                                   L+G CK   
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + EA+ L    +       + S++CLIDGL +A++ + A+  + K+ +E ++PDVV Y +
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           MI G  + G+V +A  L   M E G  P+   Y+AL+ GF     L++   L  ++ ++D
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547

Query: 374 SLPNTHTFTIL 384
                  +TI+
Sbjct: 548 VSLAASIYTIV 558


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 166/563 (29%), Positives = 265/563 (47%), Gaps = 39/563 (6%)

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K L LL LA  +         N V  +LL    S     + A ++  +M + G+ PN +T
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y ++I G+      ++      KM+  G SP+ V YN L++  CK ++V EA+ALLR+  
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G    L SY+ +I+GL    R  E      +M  + + PD V Y  ++ G  + G + 
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
             + LLS+M  +G+ P+   Y  LI   C  G L +A  +  ++  R   PN  T+T LI
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKN 444
            G C+ G++++A K+ ++M  +G  PSV  +NAL+ G C  G +++A  +L   +E G  
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLP 449

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  S  T++  +C    + KA+++  ++ E G LPD +TY+SLI 
Sbjct: 450 P--------------DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQ 495

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE-EDAFRIFGQMPQNGCT 563
           G C    +  A  LF+E+  +GL PD VTY +LIN    VD E   A R+  +M Q G  
Sbjct: 496 GLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC-VDGELSKALRLHDEMVQRGFL 554

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD------------ESMKSIE--- 608
           P    Y  L+    ++ +  +A  L L+   + S  DD               KS+E   
Sbjct: 555 PDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLV 614

Query: 609 -EFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             F  KG   E +   + +L+ + K N    A Y + + G  + G V +A N++  L   
Sbjct: 615 KGFCMKGLMNEADRVFKTMLQRNHKPN---AAIYNLMIHGHSRGGNVHKAYNLYMELEHS 671

Query: 665 KAIVTPPSCVKLIHGLCKRGYLD 687
                  + + L+  L + G  D
Sbjct: 672 SFACHTVAVIALVKALAREGMND 694



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 258/557 (46%), Gaps = 32/557 (5%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D +R+G VS     + V+I G    GD EK L    KM++    P+V  YN +++ + +K
Sbjct: 197 DMVRNG-VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKK 255

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    A+A+   M       N+++++ +INGL   G+     ++++EM  +G++P++ TY
Sbjct: 256 KKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTY 315

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             +++G C+     +   L  +M   G SP+ V Y  L+N  CK   +  A+ +      
Sbjct: 316 NTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRV 375

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P   +Y+ LIDG  +    +EAY    +M      P VV Y  ++ G    G+V++
Sbjct: 376 RGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQE 435

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+ +L  M ERG+ PD   Y+ +I GFC    L +A  ++ E+ ++  LP+T T++ LI 
Sbjct: 436 AVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQ 495

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G+C    + +A  LF +M + G  P    + +LI+  C  GEL KA  L  +M + G  P
Sbjct: 496 GLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLP 555

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN- 504
                         D  +   ++           A ++L++L    ++PD +TYN+LI  
Sbjct: 556 --------------DNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN 601

Query: 505 --------------GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
                         GFC  G +N A ++FK +  +  +P++  Y  +I+G  R      A
Sbjct: 602 CSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKA 661

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           + ++ ++  +          +L+    R         L    LR     D +  K + E 
Sbjct: 662 YNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEV 721

Query: 611 -LQKGEVENAIQGLLEM 626
             ++G ++  +  L EM
Sbjct: 722 NFKEGNMDAVLNVLTEM 738



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 258/576 (44%), Gaps = 78/576 (13%)

Query: 225 LFLKMKDSG--CSPDF---VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           LF  + D+   CS  F     ++ ++    +L  V +AL LL    + GF P + SY+ +
Sbjct: 114 LFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAV 173

Query: 280 IDGLFR-----AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG------------ 322
           +D L R      + YD+A   +R M    + P+V  Y V+IRG+   G            
Sbjct: 174 LDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKM 233

Query: 323 -----------------------KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                                  KVK+AM LL  M   G+  +   YN++I G C  G +
Sbjct: 234 EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRM 293

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +   L  E+  +  +P+  T+  L+ G C+ G +     L ++M   G  P+V  +  L
Sbjct: 294 SEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTL 353

Query: 420 IDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I+ +CKAG L +A  +F +M + G  P              ++ +  T+++ +C  GL++
Sbjct: 354 INCMCKAGNLSRAVEIFDQMRVRGLRP--------------NERTYTTLIDGFCQKGLMN 399

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +AYK+L ++  SG  P ++TYN+L++G+C +G +  A+ + + +  +GL PD V+Y T+I
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVI 459

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
            G  R      AF++  +M + G  P    Y SL+   C ++K   AF L+ + +R    
Sbjct: 460 AGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLP 519

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            D+ +  S I  +   GE+  A++   EM  +        Y++ + GL +  + K A  +
Sbjct: 520 PDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRL 579

Query: 658 ---------------FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
                          ++ L+E  +     S   L+ G C +G ++ A  VF   L+    
Sbjct: 580 LLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH- 638

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
            +P    Y L     S+      AY+L   ++   +
Sbjct: 639 -KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 211/477 (44%), Gaps = 63/477 (13%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I+G    G   +  E   +M+     PD   YN ++N   ++      L +  EMV   
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT++ LIN + K+G    A+++ D+M  RG+ PN+ TYT +I G CQ    +EAY
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAY 402

Query: 224 RLFLKMKDSGCSPDFVAYNAL-----------------------------------LNGF 248
           ++  +M  SG SP  V YNAL                                   + GF
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGF 462

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+ R + +A  +     + G +P   +YS LI GL   ++  EA+  +R+M    + PD 
Sbjct: 463 CRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDE 522

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I      G++  A++L  +M +RG +PD   Y+ LI G         A+ L ++
Sbjct: 523 VTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLK 582

Query: 369 IWKRDSLPNTHTFTILI--C-------------GMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           ++  +S+P+  T+  LI  C             G C  G++++A ++F  M +    P+ 
Sbjct: 583 LFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNA 642

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            ++N +I G  + G + KA              L++ L       H  A +  +V+    
Sbjct: 643 AIYNLMIHGHSRGGNVHKAY------------NLYMELEHSSFACHTVAVI-ALVKALAR 689

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            G+  +  ++L  +  S  L D      L+    K GN++  L +  E+   GL PD
Sbjct: 690 EGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 74/193 (38%), Gaps = 15/193 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL----NIAFR---------- 145
            + VLI+G  K    + A     K+   +  PD   YN ++    N  F+          
Sbjct: 559 TYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFC 618

Query: 146 -KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
            K L   A  V+  M++ N  PN   ++L+I+G S+ G    A  +  E+       +  
Sbjct: 619 MKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTV 678

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
               ++  L +    DE  RL   +  S    D      L+    K   +D  L +L   
Sbjct: 679 AVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEM 738

Query: 265 EKDGFVPRLGSYS 277
            KDG +P  G +S
Sbjct: 739 AKDGLLPDGGIHS 751


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 251/545 (46%), Gaps = 45/545 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F S + V+ +LL  N   +      E+ S  +S     F V++     V + + A    
Sbjct: 181 TFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALL 240

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M    C P+  +Y  +++   +       L +  EM+ + C+P++ TF+  I+GL K 
Sbjct: 241 KDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKM 300

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK------------- 228
            +   A K++D M  RG  PN FTY +++ GLC++ + DEA  L  K             
Sbjct: 301 LRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLI 360

Query: 229 -------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                              M   GC PD   YN L+ G CK   +  A  L+   +  G 
Sbjct: 361 NGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC 420

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ LID   +  R +EA     +M  + +  + V Y  +I  L +  KV+DA+ 
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +  DM  +G  PD + +N+LI G C +   ++A  L  ++     + NT T+  LI    
Sbjct: 481 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 540

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G + +A KL N M   GC      +N LI  LC+AG +EK   LF  M          
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM---------- 590

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            +S+G N   +  S   ++   C  G I  A + L  +   G  PDI+TYNSLING CK 
Sbjct: 591 -MSKGLNP--NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 647

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G    AL LF +LQ++G+ PD++TY TLI+   +    +DA  +  +   +G  P+   +
Sbjct: 648 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 707

Query: 570 KSLMT 574
             L++
Sbjct: 708 YILVS 712



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 165/604 (27%), Positives = 280/604 (46%), Gaps = 39/604 (6%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY------EMVKL--------N 163
           ++  G   EF     + +      I FR+ LF+L +  Y       +  +L        +
Sbjct: 118 IDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYS 177

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P   +++++++ L      +V   +  EM  +GI P  +T+ +V+  LC +N  D A 
Sbjct: 178 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 237

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   M   GC P+ + Y  L++   K+ RV+E L LL      G +P + +++  I GL
Sbjct: 238 ALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 297

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R  EA     +M      P+   YGV++ GL   GKV +A  LL+ +      P+ 
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNV 353

Query: 344 YCYNALIKGFCDLGLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             +N LI G+   G LD+A+++  E +      P+  T+  LI G+C+ G +  A++L N
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M+  GC P+V  +  LID  CK G LE+A  +  +M  GK   L            +  
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKGLAL------------NAV 460

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++   C    +  A  +   ++  G  PDI T+NSLI G CKV     AL L++++
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 520

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
            L+G+  +++TY TLI+   R    ++A ++   M   GC      Y  L+   CR    
Sbjct: 521 LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNI 580

Query: 583 SLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
               +L+   + + ++  +      I    + G +++A++ L +M  +     +  Y   
Sbjct: 581 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSL 640

Query: 642 LIGLCQDGQVKEALNIFSVL-VE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           + GLC+ G+ +EALN+F  L VE  C   +T  +   LI   CK G  D A  +    + 
Sbjct: 641 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNT---LISWHCKEGMFDDAHLLLSRGVD 697

Query: 699 NGFI 702
           +GFI
Sbjct: 698 SGFI 701



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 214/416 (51%), Gaps = 20/416 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + VL+ G  ++G  ++A     K+      P+V ++N ++N    +     A AV +
Sbjct: 322 SFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMH 377

Query: 158 E-MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           E M+ + C P+I T++ LI GL K G    A ++++EM  +G  PN  TYTI+I   C+ 
Sbjct: 378 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 437

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R +EA  +  +M   G + + V YN L++  CK  +V +AL +       G  P + ++
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI GL +  +++EA   Y+ M  E +  + + Y  +I      G +++A+KL++DM  
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG   D   YN LIK  C  G +++  +L  ++  +   PN  +  ILI G+CR G +  
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGG 455
           A +    M   G  P +  +N+LI+GLCK G  ++A  LF K+++ G  P          
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP---------- 667

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               D  +  T++  +C  G+   A+ +L +  +SG +P+ +T+  L++ F K G+
Sbjct: 668 ----DAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 9/387 (2%)

Query: 57  RKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R  LR F  NS    +L+    +    D     L+++ + NV +    F  LI+GY   G
Sbjct: 312 RMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRG 367

Query: 113 DCEKALESFGK-MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
             ++A     + M    C PD++ YN ++    +K   + A  +  EM    C PN++T+
Sbjct: 368 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 427

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LI+   K G+ E A  +LDEM+ +G+  N   Y  +IS LC+  +  +A  +F  M  
Sbjct: 428 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 487

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            GC PD   +N+L+ G CK+ + +EAL L +    +G +    +Y+ LI    R     E
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A      M       D + Y  +I+ L  AG ++  + L  DM  +G+ P+    N LI 
Sbjct: 548 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 607

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G +  A     ++  R   P+  T+  LI G+C+ G   +A  LF+K++  G  P
Sbjct: 608 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 667

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYK 438
               +N LI   CK G  + A+LL  +
Sbjct: 668 DAITYNTLISWHCKEGMFDDAHLLLSR 694



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 251/579 (43%), Gaps = 57/579 (9%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            + +LI+ L  +G+ +    +L +M Q GI+  +  + +++    +     +A RL L M
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 230 KDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +    C P F +YN +L+             +       G  P + ++  ++  L     
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A A  + M      P+ ++Y  +I  L + G+V + +KLL +M   G +PD   +N 
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            I G C +  + +A  L   +  R   PN+ T+ +L+ G+CR G VD+A+ L NK+    
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 350

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQT 466
             P+V +FN LI+G    G L++A  + ++  + +G  P +F              +  T
Sbjct: 351 --PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF--------------TYNT 394

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G +  A +++ ++   G  P++ITY  LI+ FCK G +  A  +  E+  KG
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L  ++V Y  LI+ L + ++ +DA  +FG M   GC P    + SL+   C+  KF  A 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L+                  ++ L +G + N I                 Y   +    
Sbjct: 515 GLY------------------QDMLLEGVIANTIT----------------YNTLIHAFL 540

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G ++EAL + + ++     +   +   LI  LC+ G ++  + +F   +  G      
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 600

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            CN L+  L   +     HA   L  M   G   D   Y
Sbjct: 601 SCNILINGL--CRTGNIQHALEFLRDMIHRGLTPDIVTY 637



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
             LDE+    +++ +  +  LIS   K    + AL  FG M    C+PD++ +N+++   
Sbjct: 445 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +   F  AL +Y +M+    + N +T++ LI+   + G  + A+K++++M  RG   + 
Sbjct: 505 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I  LC+    ++   LF  M   G +P+ ++ N L+NG C+   +  AL  LR 
Sbjct: 565 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 624

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P + +Y+ LI+GL +  R  EA   + K+  E I PD + Y  +I    + G 
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
             DA  LLS   + G +P+   +  L+  F   G
Sbjct: 685 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 257/532 (48%), Gaps = 15/532 (2%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+ N Q+  +FF          S  + + +I  L K    +   +   ++R   +S    
Sbjct: 266 KSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVV 325

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY KVG  E+    F +MK+  C PD+  YN ++N   + +    A   + EM
Sbjct: 326 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 385

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+VT+S LI+   K G  + AIK+  +M + G+LPN+FTYT +I   C+    
Sbjct: 386 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNL 445

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA++L   M  +G   + V Y ALL+G CK  R+ EA  + RS  KDG  P    Y+ L
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +A+R ++A    ++M E  I+PD++LYG +I G     K+++   +L +M+ RGI
Sbjct: 506 VHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGI 565

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             +      +I  +   G    A +   E+          T+ +LI G+C+ G+V+ A  
Sbjct: 566 SANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVD 625

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
            F +M   G  P+V ++ +LIDGLCK   +E A  LF +M+  G  P             
Sbjct: 626 YFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP------------- 672

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++     G + +A  ++ ++ E     D+  Y SL++GF + G ++ A K 
Sbjct: 673 -DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKF 731

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           F E+  KG+ P+ V    L+    +  + ++A  +  +M + G     A  +
Sbjct: 732 FNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESATMQ 783



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 298/681 (43%), Gaps = 85/681 (12%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL--------------------------- 74
           ++P++  +FF WA  +   R    +  +I  L+                           
Sbjct: 141 EDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFP 200

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
             N FD+ W T +   SG     S VF VL S + ++G  E+A E F +M+ F   P   
Sbjct: 201 VCNIFDMLWSTRNICVSG-----SGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKAR 255

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
             N +L+   +     L    + +M+     P++ T++++I+ L K G  E + ++  +M
Sbjct: 256 SCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQM 315

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G+ P+  TY  +I G  ++   +E   LF +MKD GC PD + YN L+N +CK  ++
Sbjct: 316 REMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKM 375

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
             A       + +G  P + +YS LID   +      A   +  M    + P+   Y  +
Sbjct: 376 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSL 435

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I    +AG + +A KLL+DM + G+  +   Y AL+ G C  G + +A  +   + K   
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN   +T L+ G  +   ++DA K+  +M +    P + ++ ++I G C   +LE+  L
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555

Query: 435 LFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           +  +M+   I  NP +                  T+++ Y  AG    A     ++ + G
Sbjct: 556 ILEEMKSRGISANPVI----------------STTIIDAYFKAGKSSDALNFFQEMQDVG 599

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
               I+TY  LI+G CK G +  A+  F  +   GL+P+   Y +LI+GL + +  E A 
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           ++F +M   G TP    + +L                                  I+  L
Sbjct: 660 KLFDEMQCRGMTPDITAFTAL----------------------------------IDGNL 685

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           + G ++ A+  +  M     +F L  YT  + G  Q G++ +A   F+ ++E   +    
Sbjct: 686 KHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEV 745

Query: 672 SCVKLIHGLCKRGYLDLAMDV 692
            C+ L+    KRG LD A+++
Sbjct: 746 LCICLLREYYKRGQLDEAIEL 766



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 212/461 (45%), Gaps = 54/461 (11%)

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           L   +E  + +R+F     +P+  S + L+  L ++        ++  M    I P V  
Sbjct: 235 LEEANECFSRMRNFRT---LPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFT 291

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y VMI  L + G ++++ +L   MRE G+ PD   YN+LI G+  +G L++  SL  E+ 
Sbjct: 292 YNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
               +P+  T+  LI   C+   +  A + F++M+  G  P+V  ++ LID  CK G ++
Sbjct: 352 DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQ 411

Query: 431 KANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            A  LF  M   G  P  F              +  ++++  C AG + +A+K+L  + +
Sbjct: 412 GAIKLFVDMRRTGLLPNEF--------------TYTSLIDANCKAGNLTEAWKLLNDMLQ 457

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +G   +I+TY +L++G CK G +  A ++F+ +   G+ P+   Y  L++G  + +R ED
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A +I  QM +    P   +Y S++   C +RK                   +E+   +EE
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKL------------------EETKLILEE 559

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
              +G   N +     +D                   + G+  +ALN F  + +     T
Sbjct: 560 MKSRGISANPVISTTIID----------------AYFKAGKSSDALNFFQEMQDVGVEAT 603

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +   LI GLCK G ++LA+D F   L  G  L+P V  Y
Sbjct: 604 IVTYCVLIDGLCKAGIVELAVDYFCRMLSLG--LQPNVAVY 642



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 173/380 (45%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ +T+     K    Q   + F+   +   L +  + +++I    K       W+ L++
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V +    +  L+ G  K G   +A E F  M +    P+  +Y A+++   + + 
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+ +  +M + N  P+++ +  +I G     K E    +L+EM  RGI  N    T 
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I    +  ++ +A   F +M+D G     V Y  L++G CK   V+ A+         G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ LIDGL +    + A   + +M    + PD+  +  +I G  + G +++A+
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L+S M E  I  D + Y +L+ GF   G L QAR    E+ ++  LP       L+   
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754

Query: 389 CRNGMVDDAQKLFNKMEKAG 408
            + G +D+A +L N+ME+ G
Sbjct: 755 YKRGQLDEAIELKNEMERMG 774



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 192/495 (38%), Gaps = 101/495 (20%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF     SY  ++  +FRA+ Y +A+             D V   +M   +     V + 
Sbjct: 158 GFRHTTESYCIIVHLVFRARMYTDAH-------------DTVKEVIMNSRMDMGFPVCNI 204

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +L   R    V  +  ++ L   F +LGLL++A      +    +LP   +   L+  
Sbjct: 205 FDMLWSTRNI-CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 263

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           + ++G     +K FN M  AG  PSV  +N                              
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYN------------------------------ 293

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                              M++  C  G +  + ++ +Q+ E G  PD++TYNSLI+G+ 
Sbjct: 294 ------------------VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           KVG++     LF E++  G  PD +TY  LIN   + ++   AF  F +M  NG  P+  
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y +L+   C+      A  L++   R                           GLL  +
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRR--------------------------TGLLPNE 429

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           F         YT  +   C+ G + EA  + + +++    +   +   L+ GLCK G + 
Sbjct: 430 FT--------YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
            A +VF   LK+G     +V   L+    + K  +   A  +L +M       D  LY  
Sbjct: 482 EAEEVFRSMLKDGISPNQQVYTALVHG--YIKAERMEDAMKILKQMTECNIKPDLILY-- 537

Query: 748 TKSLLPGPWNTREME 762
             S++ G  + R++E
Sbjct: 538 -GSIIWGHCSQRKLE 551


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 284/616 (46%), Gaps = 26/616 (4%)

Query: 59  RLRSF-ASNSAVISMLLKPNGFDLYWQTLDELRSGN----VSVVSDVFFVLISGYYKVGD 113
           R R F A+ S + S +       L++  L   ++ N    + +   +  + I  Y   G 
Sbjct: 80  RYRHFYAAKSLLSSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGR 139

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFR---KQLFLLALAVYYEMVKLNCLPNIVT 170
             +A + F +MK    QP +   N +LN   R        L+ AV+ + +K+    N  +
Sbjct: 140 PHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNS 199

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           F++LI+G     +   AI++L +M   G  P+  TY  ++ GLC+  R +EA  L L MK
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           + G  P+   +N L+ G C+L  + EA  ++    ++  VP   +Y+ +I G  +  R  
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA 319

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA     +M   K+ PDVV Y  +I G  E G  ++  KL+ +M  RG+ P++  YN ++
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMV 379

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
           K F   G +D+      ++ +   LP+  T+  LI   C+ G +D+A +L ++M + G  
Sbjct: 380 KWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLK 439

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
                 N ++  LC+  +L++A+             L     + G  V D+ S  T++  
Sbjct: 440 MDDVTLNTMLRALCRERKLDEAH------------DLLCSARRRGYFV-DEVSYGTLIIG 486

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           Y       +A ++  ++ E   +P IITYNS+I G C++G  N A+    EL   GL PD
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD 546

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA---FS 587
            +TY T+I+G  +  + E AF+   +M +    P      +L+   C+      A   F+
Sbjct: 547 EITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
            W+   +D+      ++  I    ++     A   L EM+ K        Y   L GL  
Sbjct: 607 TWISKGKDVDAVSYNTI--ILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664

Query: 648 DGQVKEALNIFSVLVE 663
            G++K+A    S + E
Sbjct: 665 AGRMKDAEEFISKIAE 680



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 269/560 (48%), Gaps = 24/560 (4%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V + ++ F +LI G        +A+   GKM+++ C PD   YN +L+   +K     A 
Sbjct: 193 VKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEAR 252

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  +M      PN  TF++L+ G  + G  + A  +++ M+Q  ++P+ +TY ++ISG 
Sbjct: 253 DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGF 312

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  R  EA RL  +M++   SPD V YN L+NG  +    +E   L+   E  G  P  
Sbjct: 313 CKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNS 372

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ ++    +  + DE     RKM E    PD+V Y  +I    + GK+ +A +L+ +
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  +G+  D    N +++  C    LD+A  L     +R    +  ++  LI G  ++  
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
              A +L+++M++    PS+  +N++I GLC+ G   K N    K++          L +
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMG---KTNQAIDKLD---------ELLE 540

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
            G  V D+ +  T++  YC  G + KA++   ++ E    PD++T N+L+ G CK G + 
Sbjct: 541 SG-LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLE 599

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ALKLF     KG   D+V+Y T+I  L +  R  +AF +  +M +    P    Y +++
Sbjct: 600 KALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAIL 659

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
                     L  +  ++   +   +  E  KS  +FL+ G+ ++A    +  +   N  
Sbjct: 660 G--------GLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAI 711

Query: 634 QLAPYTIWLIGLCQDGQVKE 653
               Y+  +  LC  G+ K+
Sbjct: 712 ---AYSNKINELCSQGRYKD 728



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 242/529 (45%), Gaps = 60/529 (11%)

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL---RRVDEALALLRSF 264
           I I       R  +A ++F +MK  G  P  +  N LLN   +      +  + A+   F
Sbjct: 129 ISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDF 188

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            K G      S++ LI G     R+ EA     KM +    PD + Y  ++ GL + G++
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRL 248

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTI 383
            +A  LL DM+ +G+ P+   +N L+ G C LG L +A ++ +E+  ++S+ P+  T+ +
Sbjct: 249 NEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANV-IELMSQNSVVPDAWTYNV 307

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           +I G C+ G + +A +L  +ME     P V  +N LI+G  + G  E+   L  +ME   
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME--- 364

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                     G     +  +   MV+ +   G + +  K + ++ ESG LPDI+TYN+LI
Sbjct: 365 ----------GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVT------------------------------ 533
           +  CKVG ++ A +L  E+  KGL+ D VT                              
Sbjct: 415 SWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYF 474

Query: 534 -----YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
                YGTLI G  + ++   A R++ +M +    PS   Y S++   C+  K + A   
Sbjct: 475 VDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK 534

Query: 589 WLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIG 644
             + L      D+ +  +I   + Q+G+VE A Q    ++E +FK +   +      L G
Sbjct: 535 LDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD---VVTCNTLLCG 591

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           LC++G +++AL +F+  +     V   S   +I  LCK      A D+ 
Sbjct: 592 LCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLL 640



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 116/302 (38%), Gaps = 50/302 (16%)

Query: 28  FLSKTTVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQ 84
           F+ + +  ++I+   K +      R +    +++ + S  + +++I+ L +    +    
Sbjct: 474 FVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            LDEL    +      +  +I GY + G  EKA +   KM E + +PDV           
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDV----------- 582

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                                   VT + L+ GL K G  E A+K+ +    +G   +  
Sbjct: 583 ------------------------VTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           +Y  +I  LC+  R  EA+ L  +M++    PD   YNA+L G     R+ +A   +   
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            + G              L   KR D   +       ++  P+ + Y   I  L   G+ 
Sbjct: 679 AEKGKSEN--------QFLELGKRQDARTS----EIPQEPHPNAIAYSNKINELCSQGRY 726

Query: 325 KD 326
           KD
Sbjct: 727 KD 728


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 244/499 (48%), Gaps = 33/499 (6%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           SG  +VV+  +  LI GY + G    AL     M      PD Y YN VL      + + 
Sbjct: 179 SGTANVVT--YTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWE 233

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  +  EM++ +C PN VTF+  I    ++G  + A+++L++M + G  P+   Y+ ++
Sbjct: 234 QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLV 293

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +G  +  R DEA +L   M    C P+ V YNA L G C   R +E   L+    +    
Sbjct: 294 NGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++S LI+ L + +  + A     +M +    PDVV Y  +I   S+  +  DA+KL
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKL 410

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M  +   PDT  +NA++K  C       A  L  ++ K+D   N  TF ILI  +C+
Sbjct: 411 LKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 467

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-----IGKNP 445
           NG V DA ++F  M K  C P +  +++LI+G  + G  E A  LF  M         N 
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNA 527

Query: 446 TL-----FLRLSQGGNRVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           TL       R    G  + D         + +   ++   C  GL+++A  +  Q+ + G
Sbjct: 528 TLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYG 587

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PDI TYN+LING+ + G ++ ALK    +  +   PD+++Y +++ GL R +R +DA 
Sbjct: 588 ITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGLCRAERWKDAE 644

Query: 552 RIFGQMPQNGCTPSPAVYK 570
           ++  +M +  CTP+   +K
Sbjct: 645 KLVTEMLRKNCTPNEVTFK 663



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/493 (23%), Positives = 220/493 (44%), Gaps = 93/493 (18%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   +  I+I  LC   R  +A R+   +K SG + D V++N L+ G+C+   + +A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           + +    G                                      +VV Y  +I G   
Sbjct: 173 VEAARASGTA------------------------------------NVVTYTALIDGYCR 196

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           +G++ DA++L++ M    + PDTY YN ++KG C     +QA  L  E+ +    PN  T
Sbjct: 197 SGRLADALRLIASM---PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVT 253

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F   I   C+NG++D A +L  +M K GC P V +++ L++G  + G +++A  L   M 
Sbjct: 254 FATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML 313

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
              N   +             A+L+ +    C AG   +  +++ ++      P+  T++
Sbjct: 314 CRPNTVCY------------NAALKGL----CIAGRWEEVGELIAEMVRKDCPPNDATFS 357

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +LIN  C+   +  A+++ +++Q  G  PD V+Y T+I+      R +DA ++   M   
Sbjct: 358 TLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML-- 415

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
            C P    + +++   C+ +++  A  L                               +
Sbjct: 416 -CKPDTISFNAVLKCLCKAKRWYDAVEL-------------------------------V 443

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
             +L+ D ++N+     + I +  LCQ+GQVK+A+ +F ++ + + +    +   LI+G 
Sbjct: 444 AKMLKKDCRINEMT---FNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 500

Query: 681 CKRGYLDLAMDVF 693
            ++G  ++A D+F
Sbjct: 501 SEQGLDEMAFDLF 513


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 233/461 (50%), Gaps = 32/461 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD Y YN VL      + +  A  +  EM++  C PN VTF+  I    ++G  + A+++
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           LD+M + G  P+   Y+ +I+G  +    D+A  L   M    C P+ V YNA L G C 
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCI 121

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R ++   L+    + G  P   ++S LI  L +    D A     +M +   EPD V 
Sbjct: 122 AERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVN 181

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y ++I  LSE G+V DA++LL+ M  +   PD   +NA++KGFC       A  L  +++
Sbjct: 182 YNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMF 238

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           + D      TF ILI  +C+NG+V+ A ++F +M +  C P +  +++L++G  + G +E
Sbjct: 239 RDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVE 298

Query: 431 KANLLFYKMEIGKNPTLF------------LRLSQGGNRVHD---------KASLQTMVE 469
            A  LF  M     P +F             R    G  + +         + +   ++ 
Sbjct: 299 VAIQLFRSMPC--KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILIN 356

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  GL+ +A ++L Q+   G+ PDI TYN+LINGF + G ++ ALKL   +  K   P
Sbjct: 357 SLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---P 413

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           D+++Y + + GL R +R +DA  +  +M +N CTP+   +K
Sbjct: 414 DAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFK 454



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 202/436 (46%), Gaps = 62/436 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYE 158
            F   I  + + G  ++A++   +M  + C PDV IY+ ++N  F +Q  +  AL +   
Sbjct: 44  TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN-GFSEQGHVDQALDLLNT 102

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+   C PN V ++  + GL  + + E   +++ EM ++G  PN+ T++++IS LCQ N 
Sbjct: 103 ML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNL 159

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D A  +  +M+  GC PD V YN ++N   +  RVD+AL LL S       P    ++ 
Sbjct: 160 VDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNA 216

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEE-----------------------------------K 303
           ++ G  RA+R+ +A     +MF +                                   +
Sbjct: 217 VLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYR 276

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             PD+V Y  ++ G SE G V+ A++L   M  +   PD + YNA++KG C     + A 
Sbjct: 277 CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAG 333

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+  +D  PN  TF ILI  +C+ G+VD A ++  +M   G  P +  +NALI+G 
Sbjct: 334 ELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 393

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            + G L+ A  L   M                    D  S  + ++  C A     A ++
Sbjct: 394 SEQGRLDDALKLLSTMSCKP----------------DAISYNSTLKGLCRAERWQDAEEL 437

Query: 484 LMQLAESGNLPDIITY 499
           + ++  +   P+ +T+
Sbjct: 438 VAEMLRNKCTPNEVTF 453



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 178/380 (46%), Gaps = 36/380 (9%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PDTY YN ++KG C     ++A  L  E+ +    PN  TF   I   C+NG++D A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG---G 455
           +L ++M + GC P V +++ LI+G  + G +++A  L   M    N   +    +G    
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 122

Query: 456 NRVHD----------------KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            R  D                +A+   ++   C   L+  A ++L Q+ + G  PD + Y
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +IN   + G ++ AL+L   +  K   PD++ +  ++ G  R +R  DA  +  QM +
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFR 239

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVEN 618
           + C      +  L+   C+    + A  ++ Q  R     D  +  S +  F ++G VE 
Sbjct: 240 DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEV 299

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVK- 675
           AIQ    M  K + F    Y   L GLC+  + ++A  + + +V  +C     PP+ V  
Sbjct: 300 AIQLFRSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIAEMVGKDC-----PPNEVTF 351

Query: 676 --LIHGLCKRGYLDLAMDVF 693
             LI+ LC++G +D A++V 
Sbjct: 352 NILINSLCQKGLVDRAIEVL 371



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 21/256 (8%)

Query: 71  SMLLKPN--GFDLY---------WQTLDELRS----GNVSVVSDVFFVLISGYYKVGDCE 115
           SM+ KP+  GF+           W    EL +     +  ++   F +LI    + G   
Sbjct: 204 SMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVN 263

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A + F +M  + C PD+  Y+++LN    + L  +A+ ++  M    C P+I +++ ++
Sbjct: 264 YATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVL 320

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL ++ + E A +++ EM  +   PN+ T+ I+I+ LCQ    D A  +  +M + G +
Sbjct: 321 KGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGST 380

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD   YNAL+NGF +  R+D+AL LL +       P   SY+  + GL RA+R+ +A   
Sbjct: 381 PDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEEL 437

Query: 296 YRKMFEEKIEPDVVLY 311
             +M   K  P+ V +
Sbjct: 438 VAEMLRNKCTPNEVTF 453


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 223/461 (48%), Gaps = 13/461 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K+      L    KM  F   PDVY    V+N          AL+V  +++
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKIL 118

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+  TF+ L+ GL   GK   A+ + D+M   G  PN  TY  +++GLC+  +  
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  LF +M   G SPD   YN+L++  C L        LL    K   +P + S + ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L +  +  EA+     M +  +EPDVV Y  ++ G     ++ +A+K+   M   G V
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            +   YN LI G+C +  +D+A  L  E+ +++ +PNT T++ LI G+C  G + DA  L
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           FN+M   G  P++  ++ L+D LCK   L +A  L   +E             G N   D
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE-------------GSNLDPD 405

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                  ++  C AG +  A  +   LA  G  PD+ T+N +I G CK G ++ A KLF+
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           E+   G   +  TY T+  GL + ++   A ++  +M   G
Sbjct: 466 EMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 241/511 (47%), Gaps = 15/511 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M      P ++ +  +L    + + +   L++  +M      P++ T +++
Sbjct: 38  DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIV 97

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      + + A+ +L ++ + G  P+  T+T ++ GLC + +  EA  +F KM   G 
Sbjct: 98  INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK R++ EAL L       G  P + +Y+ LI  L     +     
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M + KI P+VV   +++  L + GKV +A  ++  M + G+ PD   Y AL+ G C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               +D+A  +   + +   + N  ++  LI G C+   +D A  LF +M +    P+  
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            ++ LI GLC  G L+ A  LF +M   G+ P L               +   +++  C 
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNL--------------VTYSILLDYLCK 383

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
              + +A  +L  +  S   PD+  YN  I+G C+ G++  A  LF  L  +GL+PD  T
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           +  +I GL +    ++A ++F +M +NGC  +   Y ++     +  K S A  L  + L
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEML 503

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
                 D  +   + + L    ++ +++ +L
Sbjct: 504 ARGFSADVSTTALLVKMLSDDGLDQSVKQIL 534



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 240/527 (45%), Gaps = 49/527 (9%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  D+A   F +M      P    +  LL    K++     L+L +  +  G  P + 
Sbjct: 33  HFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY 92

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I+      R D A +   K+ +   +PD   +  ++RGL   GK+ +A+ +   M
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  P+   Y  L+ G C    L +A +L  E+  +   P+  T+  LI  +C     
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
                L N+M K+   P+V   N ++D LCK G++ +A+ +   M             QG
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMM------------IQG 260

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G    D  +   +++ +C    + +A K+   +  +G + ++++YN+LING+CK+  I+ 
Sbjct: 261 GVEP-DVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ LF+E+  + L P+++TY TLI+GL  V R +DA  +F +M   G  P+   Y  L+ 
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           + C+  + + A +L    L+ I G +                       L+ D ++    
Sbjct: 380 YLCKNHRLAEAMAL----LKAIEGSN-----------------------LDPDVQV---- 408

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y I + G+C+ G ++ A ++FS L          +   +I GLCKRG LD A  +F 
Sbjct: 409 ---YNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
              +NG +      N + + LL  ++NK   A  LL  M + G+  D
Sbjct: 466 EMDENGCLRNGCTYNTITQGLL--QNNKTSRAIQLLEEMLARGFSAD 510



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 148/316 (46%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K K + +  S + V+  L K          +D +  G V      +  L+ G+    + +
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A++ F  M    C  +V  YN ++N   + Q    A+ ++ EM +   +PN +T+S LI
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL   G+ + AI + +EM   G +PN  TY+I++  LC+ +R  EA  L   ++ S   
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD   YN  ++G C+   ++ A  L  +    G  P + +++ +I GL +    DEA   
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +R+M E     +   Y  + +GL +  K   A++LL +M  RG   D      L+K   D
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523

Query: 356 LGLLDQARSLQVEIWK 371
            GL    + +  E  +
Sbjct: 524 DGLDQSVKQILCEFMR 539


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 253/519 (48%), Gaps = 36/519 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S V+  L   +  +L +   +E++ G +      + +++  + K G  E+A + F +
Sbjct: 484 STYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+E  C P+V  Y A+++   + +    A  ++  M+   CLPNIVT+S LI+G  K+G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 184 TEVAIKMLDEMT-----------------QRGILPNKFTYTIVISGLCQINRADEAYRLF 226
            E A ++ + M                       PN   Y  ++ G C+++R +EA +L 
Sbjct: 604 MEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLL 663

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   GC P+ + Y+AL++G CK+ ++DEA  +     + GF   L +YS LID  F+ 
Sbjct: 664 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKV 723

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           KR D A     KM E    P+VV+Y  MI GL + GK  +A KL+  M E+G  P+   Y
Sbjct: 724 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 783

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            A+I GF  +G ++    L   +  +   PN  T+ +LI   C+NG +D A  L  +M++
Sbjct: 784 TAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 843

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL-FLRLSQGGNRVHDKASLQ 465
                    +  +I+G  K   +E   LL    EIG++ T  FL L             +
Sbjct: 844 THWPTHAAGYRKVIEGFNKEF-IESLGLL---DEIGQDDTAPFLSL------------YR 887

Query: 466 TMVEQYCTAGLIHKAYKILMQLAE-SGNLPDII-TYNSLINGFCKVGNINGALKLFKELQ 523
            +V+    A  +  A ++L ++A  S  L D   TYNSLI   C    ++ A +LF E+ 
Sbjct: 888 LLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
            KG+ P+  T+ +LI GL R  +  +A  +   +    C
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVC 986



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 175/735 (23%), Positives = 322/735 (43%), Gaps = 81/735 (11%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS-NSAVISMLLKPNGFDLYWQTLD 87
           LS++ V  V+   + P     FF+WA ++   +  +   +A++ ++++ +   +  + L 
Sbjct: 130 LSESLVIEVLRLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQ 189

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ++R  +  V  +   VL+  Y + G    ALE  G++K+F  +P    YN ++    +  
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249

Query: 148 LFLLALAVYYEM---------VKLNC-----------------------LPNIVTFSLLI 175
               A  V+ EM           L C                       +P+ V ++ LI
Sbjct: 250 CLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLI 309

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL ++   E A+  L+ M     LPN  TY+ ++ G     +     R+   M   GC 
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------------- 282
           P    +N+L++ +C       A  LL+   K G  P    Y+ LI               
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLL 429

Query: 283 ----------------------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                                       L  A +Y++A++  R+M  +   PD   Y  +
Sbjct: 430 ELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L  A K++ A  L  +M+  G+V D Y Y  ++  FC  GL++QAR    E+ +   
Sbjct: 490 LGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+T LI    +   V  A +LF  M   GC P++  ++ALIDG CKAG++EKA  
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQ 609

Query: 435 LFYKMEIGKN-PTLFLRLSQGGNRVHDKASL---QTMVEQYCTAGLIHKAYKILMQLAES 490
           +F +M   K+ P + +   Q  +   ++ ++     +++ +C    + +A K+L  ++  
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSME 669

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P+ I Y++LI+G CKVG ++ A ++  E+   G      TY +LI+   +V R++ A
Sbjct: 670 GCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 729

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IE 608
            ++  +M +N C P+  +Y  ++   C+  K   A+ L +Q + +   + +    +  I+
Sbjct: 730 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPNVVTYTAMID 788

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F + G++E  ++ L  M  K        Y + +   C++G +  A N+   + +     
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848

Query: 669 TPPSCVKLIHGLCKR 683
                 K+I G  K 
Sbjct: 849 HAAGYRKVIEGFNKE 863



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 160/635 (25%), Positives = 283/635 (44%), Gaps = 77/635 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI------AFRKQLFLLAL 153
           +F  L+  Y   GD   A +   KM +    P   +YN ++        +    L  LA 
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAE 433

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+    + N +  S     L  +GK E A  ++ EM  +G +P+  TY+ V+  L
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  ++ + A+ LF +MK  G   D   Y  +++ FCK   +++A        + G  P +
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +AK+   A   +  M  E   P++V Y  +I G  +AG+++ A ++   
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFER 613

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M     VPD   Y    K + D                    PN   +  L+ G C+   
Sbjct: 614 MCGSKDVPDVDMY---FKQYDD---------------DNSERPNVVIYGALLDGFCKLHR 655

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V++A+KL + M   GC P+  +++ALIDGLCK G+L++A  +  +M E G   TL+    
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY---- 711

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +  +++++Y        A K+L ++ E+   P+++ Y  +I+G CKVG  
Sbjct: 712 ----------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 761

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A KL + ++ KG +P+ VTY  +I+G  R+ + E    +  +M   G  P+   Y+ L
Sbjct: 762 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVL 821

Query: 573 MTWSCRRRKFSLAFSLWLQ------------YLRDISGRDDESMKSIEEFLQKGE----- 615
           +   C+     +A +L  +            Y + I G + E ++S+    + G+     
Sbjct: 822 IDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 881

Query: 616 --------VENAIQGL-LEMDFKLNDFQLAPYTIWLI-----------GLCQDGQVKEAL 655
                   V+N I+   LEM  +L + ++A ++  L+            LC   +V +A 
Sbjct: 882 FLSLYRLLVDNLIKAQRLEMALRLLE-EVATFSATLVDYSSTYNSLIESLCLANKVDKAF 940

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            +FS + +   I    +   LI GL +   +  A+
Sbjct: 941 RLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL 975



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 225/493 (45%), Gaps = 34/493 (6%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E A   F +MK      DVY Y  +++   +  L   A   + EM ++ C PN+VT++ L
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM----- 229
           I+   K+ K   A ++ + M   G LPN  TY+ +I G C+  + ++A ++F +M     
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKD 619

Query: 230 ------------KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
                        D+   P+ V Y ALL+GFCKL RV+EA  LL +   +G  P    Y 
Sbjct: 620 VPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYD 679

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDGL +  + DEA     +M E      +  Y  +I    +  +   A K+LS M E 
Sbjct: 680 ALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 739

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
              P+   Y  +I G C +G  D+A  L   + ++   PN  T+T +I G  R G ++  
Sbjct: 740 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETC 799

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +L  +M   G  P+   +  LID  CK G L+ A+ L  +M+    PT           
Sbjct: 800 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT----------- 848

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
               A  + ++E +    +  ++  +L ++ +    P +  Y  L++   K   +  AL+
Sbjct: 849 --HAAGYRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALR 904

Query: 518 LFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L +E+      L   S TY +LI  L   ++ + AFR+F +M + G  P    + SL+  
Sbjct: 905 LLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKG 964

Query: 576 SCRRRKFSLAFSL 588
             R  K S A  L
Sbjct: 965 LFRNSKISEALLL 977


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/554 (28%), Positives = 263/554 (47%), Gaps = 50/554 (9%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLI 105
           G   F    KR    S  + +A++  ++K    DL W+  ++ ++SGN+  V     +++
Sbjct: 173 GSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVY-TLNIMV 231

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           +   K G  +       +M+E     D+  YN ++N   R+ L   A  +   M      
Sbjct: 232 NALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLK 291

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P + T++ LINGL K G  E A ++LDEM   G+ PN  T+  ++   C+     EA R+
Sbjct: 292 PGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERV 351

Query: 226 F-----------------------------------LKMKDSGCSPDFVAYNALLNGFCK 250
           F                                    KMK  G  PD V Y  L+NG+C+
Sbjct: 352 FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCR 411

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              V  AL +     + G V  + +Y+ L++GL R K  D+A   +++M E  + PD   
Sbjct: 412 NDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 471

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
              +I G  + G +  A+ L   M  R + PD   YN L+ GFC +G +++A+ L  ++ 
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            R+  P+  +F+ILI G C  G+V +A +L+++M++ G  P++   N +I G  +AG L 
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           KAN     M           +S+G     D  +  T++  +       +A+ ++  + E 
Sbjct: 592 KANDFLNTM-----------ISEG--VPPDCITYNTLINSFVKEENFDRAFFLINNMEER 638

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G LP+++TYN+++ GF + G +  A  +  ++  KG+ PD  TY +LING    D  ++A
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698

Query: 551 FRIFGQMPQNGCTP 564
           FR+  +M Q G  P
Sbjct: 699 FRVHDEMLQRGFVP 712



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 246/552 (44%), Gaps = 57/552 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y +     +  E+F  +++      +   NA+L    +     LA  VY + 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VK   + N+ T ++++N L K GK +     L EM ++G+  +  TY  +++  C+    
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCK-------LRRVDEALA------------- 259
            EA+ L   M   G  P    YNAL+NG CK        R +DE L              
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 260 LLRSFEKD---------------GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+ S  K+               G VP L S+S ++    R      A A++ KM    +
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD V+Y ++I G      V  A+K+ ++M ERG V D   YN L+ G C   +LD A  
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +R   P+ +T T LI G C++G +  A  LF  M      P V  +N L+DG C
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515

Query: 425 KAGELEKANLLFYKM------------EIGKNPTLFLRLSQGGNRVHDK----------A 462
           K GE+EKA  L+Y M             I  N    L L     R+ D+           
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+++ Y  AG + KA   L  +   G  PD ITYN+LIN F K  N + A  L   +
Sbjct: 576 TCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           + +GL P+ VTY  ++ G  R  R ++A  +  +M   G  P  + Y SL+     +   
Sbjct: 636 EERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM 695

Query: 583 SLAFSLWLQYLR 594
             AF +  + L+
Sbjct: 696 KEAFRVHDEMLQ 707



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/565 (22%), Positives = 241/565 (42%), Gaps = 69/565 (12%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSP-------------------DFVA 240
           PN      +I  L Q  +  EA  L L++ + SG S                    + V 
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           ++ L+  + + R++ E     +   K GF   + + + L+  + +    D A+  Y    
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +     +V    +M+  L + GK+ +    LS+M E+G+  D   YN L+  +C  GL+ 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  L   +  +   P   T+  LI G+C+ G  + A+++ ++M   G  P+   FN ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
              C+  ++ +A  +F +M           L +G   V D  S  ++V  +   G + +A
Sbjct: 337 VESCRKEDVWEAERVFNEM-----------LQRG--VVPDLISFSSIVGVFSRNGELGRA 383

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
                ++   G +PD + Y  LING+C+  +++GALK+  E+  +G   D VTY TL+NG
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNG 443

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           L R    +DA  +F +M + G  P      +L+   C+    + A SL+          +
Sbjct: 444 LCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF----------E 493

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
             +++S++                          +  Y   + G C+ G++++A  ++  
Sbjct: 494 TMTLRSLKP------------------------DVVTYNTLMDGFCKVGEMEKAKELWYD 529

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           ++  +   +  S   LI+G C  G +  A  ++    + G       CN +++  L + +
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLY 745
             K + +  L  M S G   D   Y
Sbjct: 590 LSKANDF--LNTMISEGVPPDCITY 612



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 155/321 (48%), Gaps = 37/321 (11%)

Query: 94  VSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           V +V D  ++ +LI+GY +  D   AL+   +M E  C  DV  YN +LN   R ++   
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD 452

Query: 152 ALAVYYEMVKLNCLPN-----------------------------------IVTFSLLIN 176
           A  ++ EMV+    P+                                   +VT++ L++
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  K G+ E A ++  +M  R I P+  +++I+I+G C +    EA+RL+ +MK+ G  P
Sbjct: 513 GFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKP 572

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             V  N ++ G+ +   + +A   L +   +G  P   +Y+ LI+   + + +D A+   
Sbjct: 573 TLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLI 632

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M E  + P++V Y  ++ G S  G++++A  +L  M ++GI PD   Y +LI G+   
Sbjct: 633 NNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSK 692

Query: 357 GLLDQARSLQVEIWKRDSLPN 377
             + +A  +  E+ +R  +P+
Sbjct: 693 DNMKEAFRVHDEMLQRGFVPD 713



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 172/389 (44%), Gaps = 31/389 (7%)

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F +LI    +   + +  + F  + K G   S+   NAL+  + K G ++ A    +K  
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLA----WK-- 210

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                 ++    + GN V +  +L  MV   C  G +      L ++ E G   D++TYN
Sbjct: 211 ------VYEDFVKSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYN 263

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +L+N +C+ G ++ A  L   +  KGL+P   TY  LINGL +    E A R+  +M   
Sbjct: 264 TLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV 323

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE-FLQKGEVENA 619
           G  P+ A +  ++  SCR+     A  ++ + L+     D  S  SI   F + GE+  A
Sbjct: 324 GLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRA 383

Query: 620 IQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           +    E   K+    L P    YTI + G C++  V  AL + + +VE   ++   +   
Sbjct: 384 L-AYFE---KMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRM 733
           L++GLC+   LD A ++F   ++ G    P    Y L +L+  + KD     A  L   M
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVF--PDF--YTLTTLIHGYCKDGNMTKALSLFETM 495

Query: 734 KSVGYDLDACLYPKTKSLLPGPWNTREME 762
                  D   Y    +L+ G     EME
Sbjct: 496 TLRSLKPDVVTY---NTLMDGFCKVGEME 521



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 76/151 (50%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           DE++   +         +I GY + G+  KA +    M      PD   YN ++N   ++
Sbjct: 563 DEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKE 622

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           + F  A  +   M +   LPN+VT++ ++ G S+ G+ + A  +L +M  +GI P+K TY
Sbjct: 623 ENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTY 682

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           T +I+G    +   EA+R+  +M   G  PD
Sbjct: 683 TSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 236/465 (50%), Gaps = 13/465 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y + G   +A E    M     +P ++ YNAV+N   +K  ++ A  V+ EM
Sbjct: 222 TYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM 281

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           + +   P+  T++ L+    ++     A  +  +M  RG+ P+  +++ +I    +    
Sbjct: 282 LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHL 341

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A   F  MK SG  PD V Y  L+NG+C+   + EAL +     + G    + +Y+ +
Sbjct: 342 DQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTI 401

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL + K   +A A + +M E  + PD   +  +I G  + G +  A+ L   M ++ I
Sbjct: 402 LNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI 461

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI GFC    +++A  L  E+  R   PN  ++ IL+ G C  G V +A +
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L+++M + G  P++   N +I G C++G+L KA+    KM           +S+G     
Sbjct: 522 LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKM-----------ISEGVG--P 568

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++  +     + KA+ ++ ++   G  PD++TYN ++NGFC+ G +  A  + 
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           +++  +G+ PD  TY TLING    D  ++AFR   +M Q G  P
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 255/560 (45%), Gaps = 57/560 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y +     +  ++F  ++       +   N++L    +     LA  VY E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     N+ T ++++N L K  K +     L +M Q+GI  +  TY  +I+  C+    
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR-------VDEALA------------- 259
            EA+ +   M   G  P    YNA++NG CK  R        +E L+             
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 260 LLRSFEKDGFV---------------PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+ S   + F+               P L S+S LI    R    D+A  ++R M    +
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD V+Y ++I G    G + +A+++   M E+G   D   YN ++ G C   LL  A +
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +R  +P+  TFT LI G C+ G +  A  LF  M +    P +  +N LIDG C
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 425 KAGELEKANLLFYKM---EIGKNPTLFLRLSQG---------GNRVHDK----------A 462
           K  E+EKAN L+ +M   +I  N   +  L  G           R+ D+           
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T+++ YC +G + KA + L ++   G  PD ITYN+LINGF K   ++ A  L  ++
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           + KGL+PD VTY  ++NG  R  R ++A  I  +M + G  P  + Y +L+     +   
Sbjct: 597 ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNL 656

Query: 583 SLAFSLWLQYLRDISGRDDE 602
             AF    + L+     DD+
Sbjct: 657 KEAFRFHDEMLQRGFVPDDD 676



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/516 (21%), Positives = 223/516 (43%), Gaps = 53/516 (10%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           S C  D + ++ L+  + + R+++E     +   + GF+  + + + L+ GL +    D 
Sbjct: 109 STCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDL 168

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+  Y                                   +++   GI  + Y  N ++ 
Sbjct: 169 AWEVY-----------------------------------NEIARSGIELNVYTLNIMVN 193

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C    +D  +   +++ ++    +  T+  LI   CR G++ +A ++ N M   G  P
Sbjct: 194 ALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKP 253

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           ++  +NA+I+GLCK G   +A  +F +M  IG +P              D  +  T++ +
Sbjct: 254 TLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSP--------------DTTTYNTLLVE 299

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C      +A  I   +   G  PD+I+++SLI    + G+++ AL  F++++  GL PD
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +V Y  LING  R     +A  I  +M + GC      Y +++   C+++  + A +L+ 
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419

Query: 591 QYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           + +      D  +  + I    ++G +  A+     M  K     +  Y I + G C+  
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++++A  +++ ++  K      S   L++G C  G++  A  ++   ++ G       CN
Sbjct: 480 EMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCN 539

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +++    S D  K  A   L +M S G   D+  Y
Sbjct: 540 TVIKGYCRSGDLSK--ADEFLGKMISEGVGPDSITY 573


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 293/580 (50%), Gaps = 24/580 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P   +++A+ ++     +   A   +  M K   LP   + +  ++ LSK+G+ +++ 
Sbjct: 58  CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
               +M   GI P  FTY I+I  +C+      A  LF +MK  G +PD V YN L++G+
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+  +DE++ L    +  G  P + +Y+ LI+   + K    A+ ++R+M ++ ++P+V
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  +I  L + G ++ A+K   DM   G++P+ + Y++LI   C  G L +A  L  E
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +     N  T+T L+ G+C  GM+++A++LF  M KAG  P++  + ALI G  K   
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++KA  LF +M E    P + L                T+V   C+   + +   I+ ++
Sbjct: 358 MDKAMELFNEMREKDIKPDILL--------------WGTIVWGLCSESKLEECKIIMTEM 403

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            ESG   + + Y +L++ + K GN   A+ L +E++  G     VT+  LI+GL +    
Sbjct: 404 KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLV 463

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
           ++A   FG+MP +   P+ AVY +L+   C+      A  L+ + ++D +   D+   + 
Sbjct: 464 QEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDE-MQDKNMIPDKIAYTA 522

Query: 607 -IEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            I+  L+ G  + A+     ++EM  +L+   L  YT  + GL Q GQV++A    + ++
Sbjct: 523 MIDGNLKHGNFQEALNMRNKMMEMGIELD---LYAYTSLVWGLSQCGQVQQARKFLAEMI 579

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
               I     C +L+    + G +D A+++    ++ G I
Sbjct: 580 GKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 237/469 (50%), Gaps = 16/469 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI GY K+G  ++++  F +MK   C+PDV  YNA++N   + +  L A   + EM   
Sbjct: 172 TLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK 231

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           +  PN++++S LI+ L K G  ++AIK   +MT+ G+LPN+FTY+ +I   C+     EA
Sbjct: 232 DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA 291

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + L  +M       + V Y  LL+G C+   ++EA  L R+  K G  P L +Y+ LI G
Sbjct: 292 FMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHG 351

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + +  D+A   + +M E+ I+PD++L+G ++ GL    K+++   ++++M+E GI  +
Sbjct: 352 HIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGAN 411

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  L+  +   G   +A +L  E+    +     TF  LI G+C+ G+V +A   F 
Sbjct: 412 PVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFG 471

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M      P+V ++ ALIDGLCK   +  A  LF +M             Q  N + DK 
Sbjct: 472 RMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM-------------QDKNMIPDKI 518

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M++     G   +A  +  ++ E G   D+  Y SL+ G  + G +  A K   E+
Sbjct: 519 AYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEM 578

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC---TPSPAV 568
             KG+ PD      L+     +   ++A  +  ++ + G      +PAV
Sbjct: 579 IGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGNSNPAV 627



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 227/465 (48%), Gaps = 15/465 (3%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G+ + + + F  M      P V+ YN ++    ++   L A +++ +M K+   P+IV
Sbjct: 109 KAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIV 168

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LI+G  K G  + ++ + +EM   G  P+  TY  +I+  C+      A+  F +M
Sbjct: 169 TYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM 228

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           KD    P+ ++Y+ L++  CK   +  A+       + G +P   +YS LID   +A   
Sbjct: 229 KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNL 288

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA+    +M +E ++ ++V Y  ++ GL E G + +A +L   M + G+ P+   Y AL
Sbjct: 289 GEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTAL 348

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G   +  +D+A  L  E+ ++D  P+   +  ++ G+C    +++ + +  +M+++G 
Sbjct: 349 IHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGI 408

Query: 410 FPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             +  ++  L+D   KAG   E  NLL    ++G   T+               +   ++
Sbjct: 409 GANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTV--------------VTFCALI 454

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C  GL+ +A     ++ +    P++  Y +LI+G CK   I  A KLF E+Q K + 
Sbjct: 455 DGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMI 514

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           PD + Y  +I+G  +    ++A  +  +M + G       Y SL+
Sbjct: 515 PDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLV 559



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 174/380 (45%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S +T+   + K    Q+  +FF+   +   L +  + S++I    K       +   DE
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +   +V +    +  L+ G  + G   +A E F  M +    P++  Y A+++   + + 
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+ ++ EM + +  P+I+ +  ++ GL    K E    ++ EM + GI  N   YT 
Sbjct: 358 MDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTT 417

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++    +     EA  L  +M+D G     V + AL++G CK   V EA+          
Sbjct: 418 LMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD 477

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P +  Y+ LIDGL +     +A   + +M ++ + PD + Y  MI G  + G  ++A+
Sbjct: 478 LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEAL 537

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            + + M E GI  D Y Y +L+ G    G + QAR    E+  +  +P+    T L+   
Sbjct: 538 NMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKH 597

Query: 389 CRNGMVDDAQKLFNKMEKAG 408
              G +D+A +L N++ + G
Sbjct: 598 YELGNIDEAIELQNELVEKG 617



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 137/324 (42%), Gaps = 78/324 (24%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV-------------------------- 133
            +  LI G+ KV   +KA+E F +M+E D +PD+                          
Sbjct: 344 AYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEM 403

Query: 134 ---------YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                     IY  +++  F+      A+ +  EM  L     +VTF  LI+GL K G  
Sbjct: 404 KESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLV 463

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + AI     M    + PN   YT +I GLC+ N   +A +LF +M+D    PD +AY A+
Sbjct: 464 QEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAM 523

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G  K     EAL +                                     KM E  I
Sbjct: 524 IDGNLKHGNFQEALNM-----------------------------------RNKMMEMGI 548

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           E D+  Y  ++ GLS+ G+V+ A K L++M  +GI+PD      L++   +LG +D+A  
Sbjct: 549 ELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIE 608

Query: 365 LQVEIWKRD--------SLPNTHT 380
           LQ E+ ++         ++PN  T
Sbjct: 609 LQNELVEKGLIHGNSNPAVPNIQT 632


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/659 (25%), Positives = 303/659 (45%), Gaps = 86/659 (13%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFR-------FFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           LP L++ T     +K K+    F+       FF +  + +   +    + VI + ++ N 
Sbjct: 62  LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK---ALESFGKMKEFDCQPDVYI 135
            D+      ++    + +    F +LI  +    DC K   +L +FGK+ +   QPDV  
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 136 YNAVLN-IAFRKQL--------------FLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           +N +L+ +    ++              FL A+A++ +MV++   P ++TF+ LINGL  
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  ++++M  +G+  +  TY  +++G+C++     A  L  KM+++   PD V 
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+A+++  CK     +A  L     + G  P + +Y+C+IDG     R+ +A    R M 
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E +I PDV+ +  +I    + GK+ +A KL  +M  R I PDT  YN++I GFC     D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A+ +    +   + P+  TF  +I   CR   VD+  +L  ++ + G   +   +N LI
Sbjct: 419 DAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            G C+   L  A  LF +M                                         
Sbjct: 475 HGFCEVDNLNAAQDLFQEM----------------------------------------- 493

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
                     G  PD IT N L+ GFC+   +  AL+LF+ +Q+  +  D+V Y  +I+G
Sbjct: 494 -------ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
           + +  + ++A+ +F  +P +G  P    Y  +++  C +   S A ++    ++D     
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEP 605

Query: 601 DESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG-LCQDGQVKEALN 656
           D S  +  I   L+ GE++ +I+ + EM  + N F    +TI ++  L  DG++ ++ +
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEM--RSNGFSGDAFTIKMVADLITDGRLDKSFS 662



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 264/585 (45%), Gaps = 59/585 (10%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI   D M +            VI    ++NR D A  L+ KM+      +  ++N L+ 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC   ++  +L+      K GF P + +++ L+ GL    R  EA A            
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA------------ 197

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
              L+G M+    E G + +A+ L   M E G+ P    +N LI G C  G + +A +L 
Sbjct: 198 ---LFGYMV----ETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +    +  T+  ++ GMC+ G    A  L +KME+    P V +++A+ID LCK 
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G    A  LF +M E G  P +F              +   M++ +C+ G    A ++L 
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVF--------------TYNCMIDGFCSFGRWSDAQRLLR 355

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E    PD++T+N+LI+   K G +  A KL  E+  + + PD+VTY ++I G  + +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F  M     +P    + +++   CR ++        +Q LR+IS R   +  
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG----MQLLREISRRGLVANT 467

Query: 606 SIEEFLQKGEVE----NAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVKEALNI 657
           +    L  G  E    NA Q L +   ++    + P TI     L G C++ +++EAL +
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F V+   K  +   +   +IHG+CK   +D A D+F     +G  + P V  Y +    F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG--VEPDVQTYNVMISGF 582

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
              +    A  L  +MK  G++ D   Y    +L+ G     E++
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTY---NTLIRGCLKAGEID 624


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 295/626 (47%), Gaps = 14/626 (2%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VS  +  F +LI      G  E A E F KM    C+P+ + +  ++    R  L    L
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGL 202

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  +M  +  LPN V ++ LI+   K GKT  A K++D+M + G++P+  T+   IS L
Sbjct: 203 ELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISAL 262

Query: 214 CQINRADEAYRLFLKMK---DSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           C   +  EA R+F  M+   + G   P+ + Y  +L GFCK   ++EA  L+ + +++  
Sbjct: 263 CGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNAN 322

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              L SY+  + GL R  +  EA+   ++M    IEPD+  Y +++ GL + G + DA  
Sbjct: 323 FINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARM 382

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L+  M   GI+PDT  Y+ L+ G+C  G + +A +L  E+   +  PNT+T  +L+  + 
Sbjct: 383 LMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLW 442

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGK 443
           + G + +A+ L  KM + G        N +I+ LC  G+L+KA  +   M       +G 
Sbjct: 443 KEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGN 502

Query: 444 NPTLFLRLS----QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
               F+ L      G     D  +  T++   C AG +  A K  +++   G  PD   Y
Sbjct: 503 LGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           ++ I+ FC+ G I+ A ++ K+++ +G      TY +LI GL   ++  + + +  +M +
Sbjct: 563 DTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMRE 622

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G +P    Y  ++   C   + + A S+  + L+     +  S + + +   K     A
Sbjct: 623 KGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKA 682

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
              + E+   +   + A YT+    L   G+V EA  +F   ++    +       LI  
Sbjct: 683 SHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDR 742

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRP 705
           LCK   L+ A DV    +  G+   P
Sbjct: 743 LCKDEKLEAASDVLHRLIDKGYQFDP 768



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 205/457 (44%), Gaps = 53/457 (11%)

Query: 116 KALESFGKMKE---FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           K LE++  +KE      +PD+Y YN V++   +  +   A  +   M++   LP+ VT+S
Sbjct: 341 KLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYS 400

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            L++G    GK   A  +L EM      PN +T  +++  L +  R  EA  L  KM + 
Sbjct: 401 TLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK 460

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG----------FV------------ 270
           G   D V  N ++N  C   ++D+A+ ++      G          F+            
Sbjct: 461 GYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKC 520

Query: 271 -PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P L +YS +I GL +A R D+A   + +M  + ++PD  +Y   I      GK+  A +
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L DM +RG       YN+LI G      + +   L  E+ ++   P+  T+  ++  +C
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLC 640

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN----- 444
             G ++DA  + ++M + G  P++  F  LI   CKA + + ++ +F   EI  N     
Sbjct: 641 EGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF---EIALNVCGHK 697

Query: 445 ----PTLFLRLSQGGNRVHDKASLQT---------------MVEQYCTAGLIHKAYKILM 485
                 +F  L  GG     K   +T               ++++ C    +  A  +L 
Sbjct: 698 EALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLH 757

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +L + G   D  ++  +I+GF K+GN + A +L + +
Sbjct: 758 RLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K L+++  NS ++ +  K   F+LY   +DE+R   VS     +  +++   + G    A
Sbjct: 592 KTLQTY--NSLILGLGSKNQIFELY-GLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
                +M +    P++  +  ++  AF K     A    +E+    C      ++L+ N 
Sbjct: 649 PSVLDEMLQKGISPNISSFRILIK-AFCKACDFKASHEVFEIALNVCGHKEALYTLMFNE 707

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L   GK   A ++ +    R      F Y  +I  LC+  + + A  +  ++ D G   D
Sbjct: 708 LLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFD 767

Query: 238 FVAYNALLNGFCKL--RRVDEALA 259
             ++  +++GF K+  + V + LA
Sbjct: 768 PASFMPVIDGFGKMGNKHVADELA 791


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 267/594 (44%), Gaps = 89/594 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVI 210
           AL  ++ M K+N LP+++ F+LL+  + K      AI ++ EM +  GI P+ F   +VI
Sbjct: 59  ALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVI 118

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           + LC +      + +   M   G  P  V +  L+NG C    V  A+ L+   EK G+ 
Sbjct: 119 NSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYR 178

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + +Y  LI+GL +  +  EA  W RKM E    P+VV+Y  ++ GL + G V +A+ L
Sbjct: 179 SDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGL 238

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M  +GI P+   Y  LI+G C+ G   +A SL  E+ K   +P+  +  IL+  +C+
Sbjct: 239 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G +  A+ +   M   G  P V  +N+LID  C   ++++A  +F              
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF-------------- 344

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                         + MV + C                    LPDI+ Y SLI+G+CK+ 
Sbjct: 345 --------------ELMVSRGC--------------------LPDIVAYTSLIHGWCKIK 370

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           NIN A+ L  E+   G  PD VT+ TLI G  +V R   A  +F  M + G  P+     
Sbjct: 371 NINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCA 430

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            ++   C+ +  S A SL+                     ++K  +              
Sbjct: 431 IILDGLCKSQLLSEALSLF-------------------HAMEKSNL-------------- 457

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            D  +  Y+I L G+C  G++  AL +FS L      +   +   +I+G  K+G LD A 
Sbjct: 458 -DLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516

Query: 691 DVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           D+     +NG +  P  C Y   ++ L+  ++  +   Y  L  M+  G+ +DA
Sbjct: 517 DLLSNMEENGCM--PDSCTYNVFVQGLVAEREIARSIKY--LTMMRDKGFSVDA 566



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 243/497 (48%), Gaps = 17/497 (3%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           +PD +I N V+N     +L     +V   M+KL   P++VTF++LINGL   G    A++
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++D + + G   +  TY ++I+GLC++ +  EA     KM++   +P+ V Y+ +++G C
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K   V EAL L       G  P L +Y+CLI GL    R+ EA +   +M +  + PD+ 
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
              +++  L + GK+  A  ++  M   G VPD + YN+LI  +C    +D+A  +   +
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             R  LP+   +T LI G C+   ++ A  L ++M K G  P V  +  LI G C+ G  
Sbjct: 348 VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRP 407

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             A  LF  M + G+ P L               +   +++  C + L+ +A  +   + 
Sbjct: 408 LAAKELFLNMHKYGQVPNL--------------QTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           +S    +I+ Y+ +++G C  G +N AL+LF  L  KGL+ +   Y  +ING  +    +
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS-GRDDESMKSI 607
            A  +   M +NGC P    Y   +      R+ + +   +L  +RD     D  + + I
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK-YLTMMRDKGFSVDATTTEMI 572

Query: 608 EEFLQKGEVENAIQGLL 624
             +L   + +N ++  L
Sbjct: 573 INYLSTNQGDNELREFL 589



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 229/460 (49%), Gaps = 16/460 (3%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F +LI+G    GD  +A+E    +++   + DV  Y  ++N   +      A+ 
Sbjct: 145 SVVT--FTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVG 202

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
              +M + N  PN+V +S +++GL K G    A+ +  EM+ +GI PN  TYT +I GLC
Sbjct: 203 WLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC 262

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
              R  EA  L  +M   G  PD  + N L++  CK  ++ +A +++      G VP + 
Sbjct: 263 NFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVF 322

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LID      + DEA   +  M      PD+V Y  +I G  +   +  AM LL +M
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  PD   +  LI GFC +G    A+ L + + K   +PN  T  I++ G+C++ ++
Sbjct: 383 IKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLL 442

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            +A  LF+ MEK+    ++ +++ ++DG+C AG+L  A  LF  +     P   L++   
Sbjct: 443 SEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL-----PAKGLQI--- 494

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  +   M+  +   GL+ KA  +L  + E+G +PD  TYN  + G      I  
Sbjct: 495 -----NVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIAR 549

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++K    ++ KG   D+ T   +IN L   ++ ++  R F
Sbjct: 550 SIKYLTMMRDKGFSVDATTTEMIINYLS-TNQGDNELREF 588



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 2/288 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LDE+    V        +L+    K G   +A    G M      PDV+ YN++++    
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  V+  MV   CLP+IV ++ LI+G  K      A+ +LDEM + G  P+  T
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +T +I G CQ+ R   A  LFL M   G  P+      +L+G CK + + EAL+L  + E
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K      +  YS ++DG+  A + + A   +  +  + ++ +V  Y +MI G ++ G + 
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
            A  LLS+M E G +PD+  YN  ++G   +   + ARS++     RD
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGL--VAEREIARSIKYLTMMRD 559



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 193/446 (43%), Gaps = 50/446 (11%)

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDV 308
           KL+ +DEAL    +  K   +P +  ++ L+  + + K Y  A +  ++M     I+PD 
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            +  V+I  L     V     +L  M + G+ P    +  LI G C  G + +A  L   
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + K     +  T+ +LI G+C+ G   +A     KME+    P+V +++ ++DGLCK G 
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 429 LEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + +A  L  +M   G  P L               +   +++  C  G   +A  +L ++
Sbjct: 232 VSEALGLCLEMSGKGIKPNL--------------VTYTCLIQGLCNFGRWKEAGSLLDEM 277

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G +PD+ + N L++  CK G I  A  +   + L G  PD  TY +LI+     ++ 
Sbjct: 278 MKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQM 337

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           ++A R+F  M   GC P    Y SL+   C+ +                    +++M  +
Sbjct: 338 DEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI------------------NKAMHLL 379

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +E ++ G   + +                 +T  + G CQ G+   A  +F  + +   +
Sbjct: 380 DEMIKVGFTPDVVT----------------WTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVF 693
               +C  ++ GLCK   L  A+ +F
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLF 449



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 169/427 (39%), Gaps = 53/427 (12%)

Query: 315 IRGLSEAGKVK---DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           +R   ++GK+K   +A+     M +   +P    +  L+     +     A SL  E+  
Sbjct: 44  MRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHS 103

Query: 372 RDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
              + P+T    ++I  +C   +V     +   M K G  PSV  F  LI+GLC  G+  
Sbjct: 104 SLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGD-- 161

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
                     +G+   L   + + G R  D  +   ++   C  G   +A   L ++ E 
Sbjct: 162 ----------VGRAVELVDHVEKTGYR-SDVKTYGVLINGLCKMGKTSEAVGWLRKMEER 210

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P+++ Y+++++G CK G ++ AL L  E+  KG++P+ VTY  LI GL    R ++A
Sbjct: 211 NWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEA 270

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +  +M + G  P       L+   C+  K   A S+                  I   
Sbjct: 271 GSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV------------------IGFM 312

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           +  GEV +                   Y   +   C   Q+ EA  +F ++V    +   
Sbjct: 313 ILVGEVPDVFT----------------YNSLIDRYCLQNQMDEATRVFELMVSRGCLPDI 356

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   LIHG CK   ++ AM +    +K GF   P V  +      F +  + + A  L 
Sbjct: 357 VAYTSLIHGWCKIKNINKAMHLLDEMIKVGF--TPDVVTWTTLIGGFCQVGRPLAAKELF 414

Query: 731 CRMKSVG 737
             M   G
Sbjct: 415 LNMHKYG 421



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 5/223 (2%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           +N+ + +LD +  I+    P    ++ TT+     +   P      F+   K  ++ +  
Sbjct: 372 INKAMHLLDEM--IKVGFTP--DVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQ 427

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + + ++  L K             +   N+ +   ++ +++ G    G    ALE F  +
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                Q +VY Y  ++N   ++ L   A  +   M +  C+P+  T+++ + GL    + 
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             +IK L  M  +G   +  T  ++I+ L   N+ D   R FL
Sbjct: 548 ARSIKYLTMMRDKGFSVDATTTEMIINYL-STNQGDNELREFL 589


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 280/618 (45%), Gaps = 46/618 (7%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F K +     PD+   N ++N          A +V   ++K    PN +T + LI GL  
Sbjct: 86  FKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCF 145

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+ + A+   D++  +G   N+ +Y  +I+GLC+        RL  K++     PD V 
Sbjct: 146 RGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 205

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN +++  CK + + +A  L       G  P + +Y+ L+ G        EA++   +M 
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMK 265

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            + I PDV  +  +I  L + GK+K A  +L+ M +  I PD   YN+LI G+  L  + 
Sbjct: 266 LKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK 325

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A+ +   + +    PN  T+T +I G+C+  MVD+A  LF +M+     P +  + +LI
Sbjct: 326 NAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLI 385

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFL------RLSQGGNRVHDKASLQ-------- 465
           DGLCK   LE+A  L  KM E G  P ++        L +GG   + K   Q        
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445

Query: 466 -------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                   M+   C A L  +A  +  ++   G +PD IT+ ++I    +    + A K+
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKI 505

Query: 519 FKELQLKGL-----------------------RPDSVTYGTLINGLQRVDREEDAFRIFG 555
            +E+  +GL                       +PD VTYGTL++G   V+  + A  +F 
Sbjct: 506 LREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFY 565

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG 614
            M Q G TP+   Y  ++   C+++    A SL+ +        +  +  S I+   +  
Sbjct: 566 SMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNH 625

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            +E AI  L EM        +  YTI L GLC+ G+++ A  IF  L+     +      
Sbjct: 626 HLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYT 685

Query: 675 KLIHGLCKRGYLDLAMDV 692
            +I+ LCK G  D A+D+
Sbjct: 686 AMINELCKAGLFDEALDL 703



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 291/629 (46%), Gaps = 54/629 (8%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF------DLYWQTLDELRSGNVSVVS 98
            + F F + A   KR   +  N+  ++ L+K   F       LY+   D++ +    +  
Sbjct: 113 HITFAFSVLANILKR--GYHPNAITLNTLIKGLCFRGEIKKALYFH--DQVVAQGFQLNQ 168

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K G+ +       K++    +PDV +YN +++   + +L   A  +Y E
Sbjct: 169 VSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSE 228

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+     PN+VT++ L+ G    G  + A  +L+EM  + I P+  T+  +I  L +  +
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A  +   M  +   PD V YN+L++G+  L +V  A  +  S  + G  P + +Y+ 
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDGL + K  DEA + + +M  + + PD+V Y  +I GL +   ++ A+ L   M+E+G
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 408

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I PD Y Y  L+   C  G L+ A+     +  +    N  T+ ++I G+C+  +  +A 
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAM 468

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN- 456
            L +KME  GC P    F  +I  L +  E +KA  +  +M   G      +RL +    
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIV 528

Query: 457 -RVHDKASLQ-------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             V  KA ++       T+++ Y     +  A  +   +A+ G  P++  Y  +I+G CK
Sbjct: 529 LAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCK 588

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              ++ A+ LF+E++ K + P+ VTY +LI+ L +    E A  +  +M ++G  P    
Sbjct: 589 KKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYS 648

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           Y  L+   C+                  SGR + + +  +  L KG             +
Sbjct: 649 YTILLDGLCK------------------SGRLEGAKEIFQRLLVKG-------------Y 677

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            LN   +  YT  +  LC+ G   EAL++
Sbjct: 678 HLN---VQVYTAMINELCKAGLFDEALDL 703



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 240/503 (47%), Gaps = 38/503 (7%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L+E++  N++     F  LI    K G  + A      M +   +PDV  YN++++ 
Sbjct: 258 FSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F       A  V+Y M +    PN+ T++ +I+GL K    + A+ + +EM  + ++P+
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYT +I GLC+ +  + A  L  KMK+ G  PD  +Y  LL+  CK  R++ A    +
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ 437

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI------- 315
                G+   + +Y+ +I+GL +A  + EA     KM  +   PD + +  +I       
Sbjct: 438 RLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKD 497

Query: 316 --------------RGLSEAGKV--KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                         RGL EA KV  K+A  +L+ M +  I PD   Y  L+ G+  +  L
Sbjct: 498 ENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNEL 557

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             A+ +   + +    PN   +TI+I G+C+   VD+A  LF +M+    FP++  + +L
Sbjct: 558 KHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSL 617

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           ID LCK   LE+A  L  +M E G  P ++              S   +++  C +G + 
Sbjct: 618 IDALCKNHHLERAIALLKEMKEHGIQPDVY--------------SYTILLDGLCKSGRLE 663

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A +I  +L   G   ++  Y ++IN  CK G  + AL L  +++ KG  PD+VT+  +I
Sbjct: 664 GAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIII 723

Query: 539 NGLQRVDREEDAFRIFGQMPQNG 561
             L   D  + A +I  +M   G
Sbjct: 724 WALFEKDENDKAEKILXEMIARG 746



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 221/448 (49%), Gaps = 38/448 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY+ +   + A   F  M +    P+V  Y  +++   ++++   A++++ EM   N
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN 373

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P+IVT++ LI+GL K+   E AI +  +M ++GI P+ ++YTI++  LC+  R + A 
Sbjct: 374 MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 433

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F ++   G   +   YN ++NG CK     EA+ L    E  G +P   ++  +I  L
Sbjct: 434 EFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 284 FRAKRYDEAYAWYRKMF-------------EEKI----------EPDVVLYGVMIRGLSE 320
           F     D+A    R+M              E KI          +PDVV YG ++ G   
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             ++K A  +   M + G+ P+  CY  +I G C    +D+A SL  E+  ++  PN  T
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +T LI  +C+N  ++ A  L  +M++ G  P V  +  L+DGLCK+G LE A  +F ++ 
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL- 672

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQT-MVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                     L +G    H    + T M+ + C AGL  +A  +  ++ + G +PD +T+
Sbjct: 673 ----------LVKG---YHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTF 719

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGL 527
           + +I    +    + A K+  E+  +GL
Sbjct: 720 DIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 40/430 (9%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K KN +  F     +     +R++ +   +I  L K    D      +E++  N+     
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTT---MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIV 379

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-------KQLFLLA 152
            +  LI G  K    E+A+    KMKE   QPDVY Y  +L+   +       K+ F   
Sbjct: 380 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRL 439

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L   Y +       N+ T++++INGL K+     A+ +  +M  +G +P+  T+  +I  
Sbjct: 440 LVKGYHL-------NVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICA 492

Query: 213 LCQINRADEAYRLFLKMKDSG-----------------------CSPDFVAYNALLNGFC 249
           L + +  D+A ++  +M   G                         PD V Y  L++G+ 
Sbjct: 493 LFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYF 552

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
            +  +  A  +  S  + G  P +  Y+ +IDGL + K  DEA + + +M  + + P++V
Sbjct: 553 LVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIV 612

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I  L +   ++ A+ LL +M+E GI PD Y Y  L+ G C  G L+ A+ +   +
Sbjct: 613 TYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRL 672

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +    N   +T +I  +C+ G+ D+A  L  KME  GC P    F+ +I  L +  E 
Sbjct: 673 LVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDEN 732

Query: 430 EKANLLFYKM 439
           +KA  +  +M
Sbjct: 733 DKAEKILXEM 742



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 191/477 (40%), Gaps = 58/477 (12%)

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE---------AYAWYRKMFEEKIEPDVVLY 311
           LR+F    F   L SY  +       + + +         A A + +M   +  P    +
Sbjct: 7   LRTFRVSVFSHFLLSYPPIATATLHYQSHSQPHYHHHHHHAVASFDRMLLMRPPPPTFHF 66

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             ++  L         + L       G  PD    N L+  FC L  +  A S+   I K
Sbjct: 67  NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK 126

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R   PN  T   LI G+C  G +  A    +++   G   +   +  LI+GLCK GE + 
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKA 186

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
              L  K+E             G +   D     T++   C   L+  A  +  ++   G
Sbjct: 187 VARLLRKLE-------------GHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKG------------------------- 526
             P+++TYN+L+ GFC +G++  A  L  E++LK                          
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAK 293

Query: 527 ----------LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
                     ++PD VTY +LI+G   +++ ++A  +F  M Q+G TP+   Y +++   
Sbjct: 294 IVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGL 353

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           C+ +    A SL+ +        D  +  S I+   +   +E AI    +M  +     +
Sbjct: 354 CKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 413

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             YTI L  LC+ G+++ A   F  L+     +   +   +I+GLCK      AMD+
Sbjct: 414 YSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           +PDV  Y  +++  F       A  V+Y M ++   PN+  ++++I+GL K    + A+ 
Sbjct: 538 KPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + +EM  + + PN  TYT +I  LC+ +  + A  L  +MK+ G  PD  +Y  LL+G C
Sbjct: 598 LFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLC 657

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  R++ A  + +     G+   +  Y+ +I+ L +A  +DEA     KM ++   PD V
Sbjct: 658 KSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAV 717

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            + ++I  L E  +   A K+L +M  RG++ +
Sbjct: 718 TFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K        F     +    +  + +++I  L K +  +     L E++   +     
Sbjct: 588 KKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVY 647

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K G  E A E F ++       +V +Y A++N   +  LF  AL +  +M
Sbjct: 648 SYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM 707

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               C+P+ VTF ++I  L +  + + A K+L EM  RG++
Sbjct: 708 EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 259/531 (48%), Gaps = 47/531 (8%)

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
           SK     + +K+  E  Q G+  N  +Y I+++ L ++ +  EA+ L ++M+  GC PD 
Sbjct: 86  SKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDV 145

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V+Y  +++G+C +  + + + L++  +  G  P L +YS +I  L ++ +  E     R+
Sbjct: 146 VSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLRE 205

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M +  + PD V+Y  +I G  + G  + A KL S+M  R IVPD+  ++ALI G    G 
Sbjct: 206 MMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGK 265

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           + +A  L  E+ K+   P+  T+T LI G C+ G +  A  L N+M + G  P+V  + A
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L DGLCK+GEL+ AN L ++M       L L +S          +  T+V   C AG I 
Sbjct: 326 LADGLCKSGELDTANELLHEM---CRKGLQLNIS----------TYNTIVNGLCKAGNIL 372

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A K++ ++ E+G  PD ITY +L++ + K G +  A +L +E+  +GL+P  VT+  L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           NGL    + ED  R+   M + G  P+ A Y S+M   C R    ++  ++         
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIY--------- 483

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                         +G V ++                  Y I + G C+   +KEA  + 
Sbjct: 484 ---------RGMCAQGVVPDS----------------NTYNILIKGHCKARNMKEAWFLH 518

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
             +VE +  +T  S   LI G  KR  L  A  +F    + G +    + N
Sbjct: 519 KEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 246/494 (49%), Gaps = 19/494 (3%)

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFLLALAV 155
           V DVFF ++    + G   +A + F K+  +         N  L  ++ ++ +  + L V
Sbjct: 41  VFDVFFQVL---VEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           + E  +L    N  ++++L+N L + GK   A  +L  M  +G +P+  +YT +I G C 
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           +    +  +L  +M+  G  P+   Y++++   CK  +V E   +LR   K G  P    
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LIDG  +      AY  + +M   +I PD + +  +I GLS +GKV +A KL ++M 
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           ++G  PD   Y ALI G+C LG + +A  L  ++ +    PN  T+T L  G+C++G +D
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
            A +L ++M + G   ++  +N +++GLCKAG + +A  L  +M E G +P         
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP--------- 388

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D  +  T+++ Y   G + KA ++L ++ + G  P ++T+N L+NG C  G +  
Sbjct: 389 -----DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
             +L K +  KG+ P++ TY +++      +    +  I+  M   G  P    Y  L+ 
Sbjct: 444 GERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIK 503

Query: 575 WSCRRRKFSLAFSL 588
             C+ R    A+ L
Sbjct: 504 GHCKARNMKEAWFL 517



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 236/473 (49%), Gaps = 15/473 (3%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           ++ + +L++  +++G   +A     +M+   C PDV  Y  +++           + +  
Sbjct: 110 TESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVK 169

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM      PN+ T+S +I  L KSGK     K+L EM +RG+ P+   YT +I G C++ 
Sbjct: 170 EMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLG 229

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
               AY+LF +M+     PD +A++AL+ G     +V EA  L     K GF P   +Y+
Sbjct: 230 NTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG  +     +A+  + +M +  + P+VV Y  +  GL ++G++  A +LL +M  +
Sbjct: 290 ALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+  +   YN ++ G C  G + QA  L  E+ +    P+T T+T L+    + G +  A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGN 456
           ++L  +M   G  P+V  FN L++GLC +G+LE    LL + +E G  P           
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP----------- 458

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              + A+  ++++QYC    +  + +I   +   G +PD  TYN LI G CK  N+  A 
Sbjct: 459 ---NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            L KE+  K     + +Y  LI G  +  +  +A ++F +M + G   S  +Y
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 239/528 (45%), Gaps = 52/528 (9%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR-RVDEALALLRSFEKDGFVPRLGSYSC 278
           +EA + F K+ + G +    + N  L      R  +   L +   F + G      SY+ 
Sbjct: 56  NEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNI 115

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++ LFR  +  EA+    +M  +   PDVV Y  +I G    G+++  ++L+ +M+ +G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P+ Y Y+++I   C  G + +   +  E+ KR   P+   +T LI G C+ G    A 
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           KLF++ME     P    F+ALI GL  +G++ +A+ LF +M + G  P            
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP------------ 283

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +   +++ YC  G + KA+ +  Q+ + G  P+++TY +L +G CK G ++ A +
Sbjct: 284 --DEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L  E+  KGL+ +  TY T++NGL +      A ++  +M + G  P    Y +LM    
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM---- 397

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
                                         + + + GE+  A + L EM  +     +  
Sbjct: 398 ------------------------------DAYYKTGEMVKARELLREMLDRGLQPTVVT 427

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           + + + GLC  G++++   +   ++E   +    +   ++   C R  + ++ +++    
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMC 487

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             G +      N L++    +++ K+  A+ L   M    ++L A  Y
Sbjct: 488 AQGVVPDSNTYNILIKGHCKARNMKE--AWFLHKEMVEKRFNLTASSY 533



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 178/348 (51%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++   E+ +  +   S  F  LI G    G   +A + F +M +   +PD   Y A+++ 
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +      A  ++ +MV++   PN+VT++ L +GL KSG+ + A ++L EM ++G+  N
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  +++GLC+     +A +L  +MK++G  PD + Y  L++ + K   + +A  LLR
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G  P + +++ L++GL  + + ++     + M E+ I P+   Y  +++      
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN 474

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            ++ + ++   M  +G+VPD+  YN LIKG C    + +A  L  E+ ++       ++ 
Sbjct: 475 NMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYN 534

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            LI G  +   + +A++LF +M + G   S  ++N  +D   + G +E
Sbjct: 535 ALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNME 582



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 197/425 (46%), Gaps = 37/425 (8%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL--LDQARS 364
           D  ++ V  + L EAG + +A K    +   G+        AL  G C+L L  L   R 
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGV--------ALSAGSCNLYLTCLSSKRD 89

Query: 365 LQVEIWKRDS-LP------NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           +   + K  S  P      NT ++ IL+  + R G + +A  L  +ME  GC P V  + 
Sbjct: 90  MLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYT 149

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            +IDG C  GEL+K   L  +M++ G  P L+              +  +++   C +G 
Sbjct: 150 TIIDGYCHVGELQKVVQLVKEMQLKGLKPNLY--------------TYSSIILLLCKSGK 195

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +  K+L ++ + G  PD + Y +LI+GFCK+GN   A KLF E++ + + PDS+ +  
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI GL    +  +A ++F +M + G  P    Y +L+   C+  +   AF L  Q ++  
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315

Query: 597 SGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
              +  +  ++ + L K GE++ A + L EM  K     ++ Y   + GLC+ G + +A+
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLR 713
            +   + E        +   L+    K G +  A ++    L  G  L+P V   N L+ 
Sbjct: 376 KLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG--LQPTVVTFNVLMN 433

Query: 714 SLLFS 718
            L  S
Sbjct: 434 GLCMS 438



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 128/271 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+   L K    D   + L E+    + +    +  +++G  K G+  +A++   +MKE
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD   Y  +++  ++    + A  +  EM+     P +VTF++L+NGL  SGK E 
Sbjct: 384 AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             ++L  M ++GI+PN  TY  ++   C  N    +  ++  M   G  PD   YN L+ 
Sbjct: 444 GERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIK 503

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK R + EA  L +   +  F     SY+ LI G F+ K+  EA   + +M  E +  
Sbjct: 504 GHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVA 563

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
              +Y + +    E G ++  ++L  +  E+
Sbjct: 564 SAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 227/462 (49%), Gaps = 15/462 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K GD E+  +   +M++  C  DV  YNA++N   +      A + + EM +  
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            + N+VTFS  ++   K G  + A+K+  +M  RG++PN+FTYT ++ G C+  R D+A 
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 360

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M   G  P+ V Y  +++G CK  +V EA  +L   E+ G       Y+ LI G 
Sbjct: 361 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGH 420

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F     + A     +M  + +E DV LYG +I GL +  KV +A  LL  M   G+ P+T
Sbjct: 421 FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNT 480

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  ++      G   +A +L  +I      PN  T+  LI G+C+ G + +A   FNK
Sbjct: 481 VIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M + G  P+V  + ALIDG CK G L KA  L  +M I K  +L            DK  
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM-IDKGMSL------------DKVV 587

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             ++++ Y     +  A+ +  ++ ESG   D+  Y   I+GFC +  +  A  +  E+ 
Sbjct: 588 YTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ--NGCT 563
             G+ PD   Y  LI   Q++   E+A  +  +M    + CT
Sbjct: 648 GTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSSCT 689



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 237/475 (49%), Gaps = 15/475 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F ++I    K G+  +A   F +MK   C PDV  YN++++   +         +  EM
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K  C  ++VT++ LIN  SK G+ E A     EM ++G++ N  T++  +   C+    
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +LF +M+  G  P+   Y +L++G CK  R+D+A+ LL      G VP + +Y+ +
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL +  +  EA      M    ++ + +LY  +I G       + A+ LL+ M+ +G+
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   Y  LI G C    +D+A+SL  ++      PNT  +T ++  + + G   +A  
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L +K+  +G  P+V  + ALIDGLCKAG + +A   F KM E+G +P +           
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNV----------- 550

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   +++ +C  G ++KA  ++ ++ + G   D + Y SLI+G+ K  N+  A  L
Sbjct: 551 ---QAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             ++   GL+ D   Y   I+G   ++  ++A  +  +M   G TP   VY  L+
Sbjct: 608 KTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 231/455 (50%), Gaps = 29/455 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+V+ +N V++   ++   + A A++  M  + C P++VT++ LI+G  K G  E   ++
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           + EM + G   +  TY  +I+   +  R ++AY  F +MK  G   + V ++  ++ FCK
Sbjct: 258 VSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCK 317

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              V EA+ L       G +P   +Y+ L+DG  +A R D+A     +M  + + P+VV 
Sbjct: 318 EGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC-------DLGLLDQAR 363
           Y VM+ GL + GKV +A  +LS M   G+  +   Y  LI G          L LL+Q +
Sbjct: 378 YTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMK 437

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +  +E+       +   +  LI G+C++  VD+A+ L +KM   G  P+  ++  ++D L
Sbjct: 438 NKGMEL-------DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDAL 490

Query: 424 CKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            KAG+  +A  L +K ++ G  P +               +   +++  C AG I +A  
Sbjct: 491 FKAGKESEAVALLHKILDSGFQPNV--------------VTYCALIDGLCKAGSISEAIS 536

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
              ++ E G  P++  Y +LI+GFCK+G++N A+ L  E+  KG+  D V Y +LI+G  
Sbjct: 537 HFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYM 596

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +    +DAF +  +M ++G       Y   ++  C
Sbjct: 597 KQANLQDAFALKTKMIESGLQLDLYCYTCFISGFC 631



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 255/515 (49%), Gaps = 20/515 (3%)

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +L   PN  T + ++  L+++ +  +  ++ D +     +PN FT+ IVI  LC+     
Sbjct: 162 QLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELV 217

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  LF++MK  GCSPD V YN+L++G+ K   ++E   L+    K G    + +Y+ LI
Sbjct: 218 EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALI 277

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  R ++AY+++ +M  + +  +VV +   +    + G V++AMKL + MR RG++
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+ + Y +L+ G C  G LD A  L  E+  +  +PN  T+T+++ G+C+ G V +A  +
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            + ME+ G   +  ++  LI G       E+A  L  +M   KN  + L +S  G     
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM---KNKGMELDVSLYG----- 449

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                T++   C    + +A  +L ++A  G  P+ + Y ++++   K G  + A+ L  
Sbjct: 450 -----TLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLH 504

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           ++   G +P+ VTY  LI+GL +     +A   F +M + G  P+   Y +L+   C+  
Sbjct: 505 KILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
             + A  L  + +      D     S I+ ++++  +++A     +M        L  YT
Sbjct: 565 SLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYT 624

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            ++ G C    ++EA  + S ++     +TP   V
Sbjct: 625 CFISGFCNMNMMQEARGVLSEMIGTG--ITPDKTV 657



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 202/429 (47%), Gaps = 43/429 (10%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q + E+R    +     +  LI+ + K G  EKA   FG+MK      +V  ++  ++  
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAF 315

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++ L   A+ ++ +M     +PN  T++ L++G  K+G+ + AI +LDEM  +G++PN 
Sbjct: 316 CKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375

Query: 204 FTYTIVISGLCQI-----------------------------------NRADEAYRLFLK 228
            TYT+++ GLC+                                    N ++ A  L  +
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           MK+ G   D   Y  L+ G CK ++VDEA +LL      G  P    Y+ ++D LF+A +
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA A   K+ +   +P+VV Y  +I GL +AG + +A+   + MRE G+ P+   Y A
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI GFC +G L++A  L  E+  +    +   +T LI G  +   + DA  L  KM ++G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT-------LFLRLSQGGNRVHDK 461
               +  +   I G C    +++A  +  +M IG   T         +R  Q    + + 
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEM-IGTGITPDKTVYNCLIRKYQKLGNMEEA 674

Query: 462 ASLQTMVEQ 470
           +SLQ  +E 
Sbjct: 675 SSLQNEMES 683



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 206/454 (45%), Gaps = 24/454 (5%)

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R++F+    P+V  + ++I  L + G++ +A  L   M+  G  PD   YN+LI G+   
Sbjct: 189 RRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKC 248

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L++   L  E+ K     +  T+  LI    + G ++ A   F +M++ G   +V  F
Sbjct: 249 GDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTF 308

Query: 417 NALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +  +D  CK G +++A  LF +M + G  P  F              +  ++V+  C AG
Sbjct: 309 STFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEF--------------TYTSLVDGTCKAG 354

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A  +L ++   G +P+++TY  +++G CK G +  A  +   ++  G++ + + Y 
Sbjct: 355 RLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYT 414

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY--- 592
           TLI+G    +  E A  +  QM   G     ++Y +L+   C+ +K   A SL  +    
Sbjct: 415 TLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGC 474

Query: 593 -LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
            LR  +      M ++ +  ++ E    +  +L+  F+ N   +  Y   + GLC+ G +
Sbjct: 475 GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPN---VVTYCALIDGLCKAGSI 531

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            EA++ F+ + E        +   LI G CK G L+ AM +    +  G  L   V   L
Sbjct: 532 SEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSL 591

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +    + K      A+ L  +M   G  LD   Y
Sbjct: 592 IDG--YMKQANLQDAFALKTKMIESGLQLDLYCY 623



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 32/411 (7%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P VV    ++  L++ G + DA++ L+ +R+  + P+T   N +        LL  AR+ 
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHI--------LLRLARNR 183

Query: 366 QVEIWKR--DSL--PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           Q  + +R  D L  PN  TF I+I  +C+ G + +A+ LF +M+  GC P V  +N+LID
Sbjct: 184 QGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLID 243

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           G  K G+LE+   L  +M             +      D  +   ++  +   G + KAY
Sbjct: 244 GYGKCGDLEEVEQLVSEM-------------RKSGCAADVVTYNALINCFSKFGRMEKAY 290

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
               ++   G + +++T+++ ++ FCK G +  A+KLF +++++G+ P+  TY +L++G 
Sbjct: 291 SYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGT 350

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  R +DA  +  +M   G  P+   Y  ++   C+  K + A ++ L  +     + +
Sbjct: 351 CKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV-LSLMERGGVKAN 409

Query: 602 ESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           E + +  I         E A+  L +M  K  +  ++ Y   + GLC+D +V EA ++  
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            +  C           ++  L K G    A+ +    L +GF  +P V  Y
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF--QPNVVTY 518



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 35/198 (17%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A+I  L K           +++R   +      +  LI G+ K+G   KA+    +M + 
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
               D  +Y +                                   LI+G  K    + A
Sbjct: 580 GMSLDKVVYTS-----------------------------------LIDGYMKQANLQDA 604

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
             +  +M + G+  + + YT  ISG C +N   EA  +  +M  +G +PD   YN L+  
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664

Query: 248 FCKLRRVDEALALLRSFE 265
           + KL  ++EA +L    E
Sbjct: 665 YQKLGNMEEASSLQNEME 682



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 53/128 (41%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I    K    +     ++E+    +S+   V+  LI GY K  + + A     KM E
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              Q D+Y Y   ++      +   A  V  EM+     P+   ++ LI    K G  E 
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEE 673

Query: 187 AIKMLDEM 194
           A  + +EM
Sbjct: 674 ASSLQNEM 681


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 228/472 (48%), Gaps = 61/472 (12%)

Query: 104 LISGYYKVGDCEKA------LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           LI G++   +  KA      LE +GK       PDV+ YNA+++   +      A  V  
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYGK-------PDVFAYNALISGFIKANQLENANRVLD 162

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            M     LP++VT++++I      GK ++A+++ +E+ +    P   TYTI+I       
Sbjct: 163 RMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDG 222

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             D A +L  +M   G  PD + YNA++ G CK   VD+A  LLRS    G  P + +Y+
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYN 282

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+  L    ++ E      +M     +P+VV + ++I  L   GKV++A+ LL  M+E+
Sbjct: 283 ILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK 342

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ PD YCY+ LI GFC  G LD A      +     LP+   +  ++ G+CR G  D A
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            ++F K+++ GC P+V  +N                            TLF  L   G+R
Sbjct: 403 LEVFEKLDEVGCPPNVSSYN----------------------------TLFSALWSSGDR 434

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                               ++A +++++L   G  PD ITYNSLI+  C+ G ++ A++
Sbjct: 435 --------------------YRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIE 474

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           L  ++Q    RP+ V+Y  ++ GL +V+R  DA  +   M + GC P+   Y
Sbjct: 475 LLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTY 526



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 185/398 (46%), Gaps = 44/398 (11%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    LISG+ K    E A     +MK     PDV  YN ++     +    LAL ++
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            E++K NC P ++T+++LI      G  +VA+K+LDEM  +G+ P+  TY  +I G+C+ 
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALL------------------------------- 245
              D+A+ L   +   GC PD + YN LL                               
Sbjct: 257 MMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTH 316

Query: 246 ----NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
                  C+  +V+EA+ LLRS ++ G  P    Y  LI G  R  R D A  +   M  
Sbjct: 317 SILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +   PD+V Y  ++ GL   GK   A+++   + E G  P+   YN L       G  D+
Sbjct: 377 DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG--DR 434

Query: 362 ARSLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            R+L+  +++  +   P+  T+  LI  +CR+GMVD+A +L   M+     P+V  +N +
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNII 494

Query: 420 IDGLCKAGELEKA-NLLFYKMEIGKNP--TLFLRLSQG 454
           + GLCK      A  +L    E G  P  T ++ L +G
Sbjct: 495 LLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 222/474 (46%), Gaps = 28/474 (5%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LLN  C+  + +E+L  L      G+ P +   + LI G F ++   +A     ++ E  
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKA-TRVMEILERY 133

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            +PDV  Y  +I G  +A ++++A ++L  M+ RG +PD   YN +I  FC  G LD A 
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  E+ K +  P   T+TILI     +G +D A KL ++M   G  P    +NA+I G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 424 CKAGELEKA-NLLFYKMEIGKNPTLFL------------RLSQGGNRVHDKASL------ 464
           CK   ++KA  LL      G  P +              + S+G   + +  S+      
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 465 ---QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                ++   C  G + +A  +L  + E G  PD   Y+ LI GFC+ G ++ A +  + 
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WSCRR 579
           +   G  PD V Y T++ GL R  + + A  +F ++ + GC P+ + Y +L +  WS   
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPY 638
           R    A  + L+ L      D+ +  S+   L + G V+ AI+ L++M        +  Y
Sbjct: 434 RY--RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
            I L+GLC+  +  +A+ + + + E        + + LI G+   G    AM++
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 4/361 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            DL  +  +EL   N       + +LI      G  + A++   +M     +PD   YNA
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++    ++ +   A  +   +    C P+I+T+++L+  L   GK     K++ EM   G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN  T++I+I  LC+  + +EA  L   MK+ G  PD   Y+ L+ GFC+  R+D A 
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
             L     DG +P + +Y+ ++ GL R  + D+A   + K+ E    P+V  Y  +   L
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
             +G    A++++  +  +GI PD   YN+LI   C  G++D+A  L V++      PN 
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL----CKAGELEKANL 434
            ++ I++ G+C+    +DA ++   M + GC P+   +  LI+G+     +A  +E AN 
Sbjct: 489 VSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANS 548

Query: 435 L 435
           L
Sbjct: 549 L 549



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 35/323 (10%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           G D+  + LDE+ S  +   +  +  +I G  K    +KA E    +    C+PD+  YN
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYN 282

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +L     +  +     +  EM+ + C PN+VT S+LI  L + GK E A+ +L  M ++
Sbjct: 283 ILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK 342

Query: 198 GI-----------------------------------LPNKFTYTIVISGLCQINRADEA 222
           G+                                   LP+   Y  +++GLC+  +AD+A
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F K+ + GC P+  +YN L +          AL ++      G  P   +Y+ LI  
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L R    DEA      M   +  P+VV Y +++ GL +  +  DA+++L+ M E+G  P+
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522

Query: 343 TYCYNALIKGFCDLGLLDQARSL 365
              Y  LI+G    GL  +A  L
Sbjct: 523 ETTYILLIEGIGFSGLRAEAMEL 545



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 170/418 (40%), Gaps = 87/418 (20%)

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AGK  +++  L  M ++G  PD      LIKGF +                         
Sbjct: 82  AGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFN------------------------- 116

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                    RN  +  A ++   +E+ G  P V  +NALI G  KA +LE AN +  +M+
Sbjct: 117 --------SRN--IGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMK 165

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                      S+G   + D  +   M+  +C+ G +  A +I  +L +    P +ITY 
Sbjct: 166 -----------SRG--FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYT 212

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI      G I+ A+KL  E+  KGL PD++TY  +I G+ +    + AF +   +   
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC P    Y  L+     R K+S                  E  K I E +  G   N +
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWS------------------EGEKLISEMISIGCKPNVV 314

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHG 679
                            ++I +  LC+DG+V+EA+N+   + E K +     C   LI G
Sbjct: 315 T----------------HSILIGTLCRDGKVEEAVNLLRSMKE-KGLKPDAYCYDPLIAG 357

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            C+ G LDLA +   Y + +G +  P + NY        +  K   A  +  ++  VG
Sbjct: 358 FCREGRLDLATEFLEYMISDGCL--PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 221/450 (49%), Gaps = 19/450 (4%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M++  C P++VT+++L+  + KS     A+ +LDEM  +G  PN  TY ++I+G+C+  R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D+A  +  ++   G  PD V+Y  +L G C  RR D+   L         VP   ++  
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+    R    + A    ++M +    P+  L  ++I  + + G+V DA   L++M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PDT  Y  +++G C  G  + A+ L  E+ +++  PN  TF   IC +C+ G+++ A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG---G 455
           KL   M + GC   +  +NAL+ G C  G ++ A  LF  +    N   +  L  G    
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHA 477

Query: 456 NRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            R+   A L                  +V  +C  G + +A +++ Q+ E G  P++IT+
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITF 537

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N+L++G  K  N   AL+L   L  KG+  D++TY ++++ L R DR E+A ++   +  
Sbjct: 538 NTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQD 597

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            G  P   +Y  ++   C+R +   A   +
Sbjct: 598 MGMRPKVGMYNKILFALCKRCETDQAIDFF 627



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 232/500 (46%), Gaps = 16/500 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + ++  + K +GF      LDE+R+   +     + V+I+G  + G  + A E  
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEIL 245

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++  +  QPD+  Y  VL      + +     ++ EMV   C+PN VTF +L+    + 
Sbjct: 246 NRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRG 305

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E AI++L +M+Q G  PN     IVI+ +C+  R D+AY     M   GC+PD ++Y
Sbjct: 306 GMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISY 365

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             +L G C+  R + A  LL    +    P   +++  I  L +    ++A      M E
Sbjct: 366 TTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPE 425

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                 +V Y  ++ G    G+V  A++L +++      P+T  Y  L+ G C    LD 
Sbjct: 426 YGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDA 482

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ ++D   N  TF +L+   C+ G V++A +L N+M + GC P++  FN L+D
Sbjct: 483 AAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLD 542

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           G+ K    E+A  L + + + K  +L            D  +  ++V+         +A 
Sbjct: 543 GITKDCNSEEALELLHGL-VSKGVSL------------DTITYSSVVDVLSREDRTEEAI 589

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++L  + + G  P +  YN ++   CK    + A+  F  +   G  P+  TY  LI GL
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 542 QRVDREEDAFRIFGQMPQNG 561
                 ++A  +  ++   G
Sbjct: 650 AHEGLLKEARYVLSELYAKG 669



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 223/473 (47%), Gaps = 17/473 (3%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   GC P  V Y  LL   CK     EA+ +L      G  P + +Y+ +I+G+ R  R
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D+A     ++     +PD+V Y  +++GL  A +  D   L ++M ++  VP+   ++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L++ FC  G++++A  +  ++ +    PNT    I+I  +C+ G VDDA    N M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
           C P    +  ++ GLC+AG  E A  L  +M     P              ++ +  T +
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP-------------NEVTFNTFI 404

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  GLI +A K++  + E G    I+TYN+L++GFC  G ++ AL+LF  L  +   
Sbjct: 405 CILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE--- 461

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P+++TY TL+ GL   +R + A  +  +M Q  C  +   +  L+++ C++     A  L
Sbjct: 462 PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMEL 521

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
             Q +      +  +  ++ + + K    E A++ L  +  K        Y+  +  L +
Sbjct: 522 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSR 581

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           + + +EA+ +   + +           K++  LCKR   D A+D F Y + NG
Sbjct: 582 EDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 634



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 3/311 (0%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + V+  L +   ++   + L E+   N       F   I    + G  E+A++    M
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E+ C   +  YNA+++    +     AL ++     L C PN +T++ L+ GL  + + 
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFN---NLPCEPNTITYTTLLTGLCHAERL 480

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++L EM Q+    N  T+ +++S  CQ    +EA  L  +M + GC+P+ + +N L
Sbjct: 481 DAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 540

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+G  K    +EAL LL      G      +YS ++D L R  R +EA      + +  +
Sbjct: 541 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 600

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P V +Y  ++  L +  +   A+   + M   G +P+   Y  LI+G    GLL +AR 
Sbjct: 601 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 660

Query: 365 LQVEIWKRDSL 375
           +  E++ +  L
Sbjct: 661 VLSELYAKGVL 671



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 84/223 (37%), Gaps = 40/223 (17%)

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G +P  VTY  L+  + +     +A  +  +M   GCTP+   Y  ++   CR      
Sbjct: 181 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE----- 235

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWL 642
                        GR D++ + +      G                  FQ  +  YT  L
Sbjct: 236 -------------GRVDDAKEILNRLSSYG------------------FQPDIVSYTTVL 264

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GLC   +  +   +F+ +V+ K +    +   L+   C+ G ++ A+ V     ++G  
Sbjct: 265 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               +CN ++ ++   K  +   AY  L  M   G + D   Y
Sbjct: 325 PNTTLCNIVINAI--CKQGRVDDAYDFLNNMGMYGCNPDTISY 365


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 181/699 (25%), Positives = 323/699 (46%), Gaps = 32/699 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
           LS   V  ++   KNP+  F  F  A    R   +A ++ V   +L+        +   +
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSAT---RHPGYAHSAVVYHHILRRLSETRMVNHVSR 64

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLN-- 141
            ++ +RS       DV   +I  Y K    ++AL+ F +M+E F C+P +  YN +LN  
Sbjct: 65  IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
           +  ++ + + +L  Y+E   +   PN+ T+++LI    K  + E A   LD M + G  P
Sbjct: 125 VEAKQWVKVESLFAYFETAGV--APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + F+Y+ VI+ L +  + D+A  LF +M + G +PD   YN L++GF K +    A+ L 
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242

Query: 262 -RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
            R  E     P + +++ +I GL +  R D+    + +M + + E D+  Y  +I GL +
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AG V  A  + +++ ER    D   YN ++ GFC  G + ++  L   +  ++S+ N  +
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVS 361

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + ILI G+  NG +D+A  ++  M   G       +   I GLC  G + KA  +  ++E
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                      S GG+   D  +  ++++  C    + +A  ++ ++++ G   +    N
Sbjct: 422 -----------SSGGHL--DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +LI G  +   +  A    +E+   G RP  V+Y  LI GL +  +  +A     +M +N
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVE 617
           G  P    Y  L+   CR RK  LA  LW Q+L+  SG + + M     I      G+++
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ--SGLETDVMMHNILIHGLCSVGKLD 586

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           +A+  +  M+ +     L  Y   + G  + G    A  I+  + +        S   ++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            GLC    +  AM+ F     +G        N L+R+++
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 233/478 (48%), Gaps = 13/478 (2%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KALE +  M E+  +P V  YN +L+   +      AL +  +M +  C P+ VTF++LI
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NGLSK G+ + A  ++ EM + G+  + +TY  +I G C+     EA  L+ +M   G S
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P   ++N ++ GFCK  ++ +A   L    K   +P + SY+ LI G  R     EA+  
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             ++    +  ++V Y  +I GL   G ++ A+KL  DM  RGI PD   Y  L+ G C 
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG +  A+    E+      P+   +T  I G  + G    A KL  +M   G  P V  
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVIT 519

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +N  ++GLCK G LE+A  L  KM           +  G   V D  +  + +  +   G
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKM-----------IRDG--HVPDHVTYTSFMHAHMENG 566

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +  +I   +   G  P ++TY  LI+     G ++ A+  F E+Q KG+ P+ +TY 
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            LING  +V + + A + F +M + G  P+   Y  L+  +C   K+  A  L+ Q L
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQML 684



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 181/374 (48%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + AS++ ++    K        Q L ++   N+      +  LI G+ ++G+  +A    
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +++  +   ++  YN +++   R      AL +  +M+     P++VT+++L+NG  K 
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKL 460

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G   +A +  DEM   G+ P++F YT  I G  ++    +A++L  +M   G  PD + Y
Sbjct: 461 GNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITY 520

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N  +NG CKL  ++EA  LL+   +DG VP   +Y+  +          E    +  M  
Sbjct: 521 NVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLS 580

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               P VV Y V+I   +  G++  AM    +M+E+G+VP+   YN LI GFC +  +DQ
Sbjct: 581 RGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQ 640

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A    +E+ ++   PN +T+TILI   C  G   +A +L+ +M      P      AL+ 
Sbjct: 641 ACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLK 700

Query: 422 GLCKAGELEKANLL 435
            L K  +++    +
Sbjct: 701 KLDKDYKVQAVQFI 714



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 216/485 (44%), Gaps = 20/485 (4%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           + L +     ++ F+P + + + ++  L       +A   YR M E  I P V  Y  M+
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
               + G+V+ A+ L+  M+ERG  P    +N LI G    G L QA+ L  E+ K    
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            + +T+  LICG C+ G++ +A  L+ +M   G  P+V   N ++ G CK G++  A   
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
              M                N + D  S  T++  +C  G I +A+ +L +L       +
Sbjct: 365 LSDM-------------LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I+TYN+LI+G C++G++  ALKL +++  +G+ PD VTY  L+NG  ++     A   F 
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-G 614
           +M   G  P    Y + +    +    + AF L  + L      D  +       L K G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531

Query: 615 EVENAIQGLLEM--DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            +E A + L +M  D  + D     YT ++    ++G ++E   IF  ++      T  +
Sbjct: 532 NLEEAGELLQKMIRDGHVPDH--VTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              LIH     G LD AM  FL   + G +  P V  Y +    F K  K   A      
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVV--PNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 733 MKSVG 737
           M+  G
Sbjct: 648 MQEKG 652



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 206/484 (42%), Gaps = 52/484 (10%)

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +A E YR+   M + G  P    YN +L+ FCK   V  AL L         VP++    
Sbjct: 220 KALEVYRM---MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL---------VPKMQERG 267

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           C                           P  V + V+I GLS+ G+++ A  L+ +M + 
Sbjct: 268 CY--------------------------PSEVTFNVLINGLSKKGELQQAKGLIQEMAKA 301

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+    Y YN LI G+C  GLL +A +L  E+  R   P   +   ++ G C+ G + DA
Sbjct: 302 GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDA 361

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
           ++  + M K    P +  +N LI G C+ G + +A +L  ++        F  LS     
Sbjct: 362 RQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR-------FRNLS----- 409

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  T+++  C  G +  A K+   +   G  PD++TY  L+NG CK+GN+  A +
Sbjct: 410 -FNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKE 468

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            F E+   GL PD   Y   I G  ++     AF++  +M   G  P    Y   +   C
Sbjct: 469 FFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLC 528

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           +      A  L  + +RD    D  +  S +   ++ G +    +   +M  +     + 
Sbjct: 529 KLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVV 588

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT+ +     +G++  A+  F  + E   +    +   LI+G CK   +D A   F+  
Sbjct: 589 TYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEM 648

Query: 697 LKNG 700
            + G
Sbjct: 649 QEKG 652


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 182/729 (24%), Positives = 332/729 (45%), Gaps = 73/729 (10%)

Query: 29  LSKTTVTSVIM-----KTKNPQVGFRFFIWAAKRKRLRSFASNSAVI-SMLLKPNGFDLY 82
           LS T+ T  I+     +   P++   FF      + LR+     A+I S LLK  GF   
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFF-----GQLLRTGLRVDAIIASHLLK--GFCEA 161

Query: 83  WQTLDEL-----RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFD--CQPDV 133
            +T + L     R+  +  V DVF   +L+      G   +A +    M E    C PDV
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDV 221

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             YN V++  F++     A  ++ EMV+    P++VT+S +++ L K+   + A   L +
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  +G+LP+ +TY  +I G     +  EA R+F +M+     PD VA N L+   CK  +
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + EA  +  +    G  P + SY+ +++G        +    +  M  + I PD+  + V
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNV 401

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I+  +  G +  AM + ++MR+ G+ P    Y  +I   C +G +D A     ++  + 
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            +P+ + +  LI G C +G +  A++L +++   G    +  F ++I+ LCK G +  A 
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521

Query: 434 LLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F   + +G +P              D      +++ YC  G + KA ++   +  +G 
Sbjct: 522 NIFDLTVNVGLHP--------------DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+++ Y +L+NG+CK+G I+  L LF+E+  KG++P ++ Y  +I+GL    R   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F +M ++G   +   Y  ++    + R F  A  L+ +                     
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE--------------------- 666

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
                     L  M+ K++   L      + G+ Q  +V+EA ++F+ +     +    +
Sbjct: 667 ----------LRAMNVKIDIITL---NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              +I  L K G ++ A D+F      G     R+ N+++R LL  K N+ V A   L +
Sbjct: 714 YSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL--KKNEIVRAGAYLSK 771

Query: 733 MKSVGYDLD 741
           +    + L+
Sbjct: 772 IDERNFSLE 780



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 254/561 (45%), Gaps = 35/561 (6%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P  +TY I++    + +R + A   F ++  +G   D +  + LL GFC+ +R DE
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI--EPDVVLYGV 313
           AL  LL    + G VP + SY+ L+  L    +  +A    R M E      PDVV Y  
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   Y++++   C    +D+A +   ++  + 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LP+  T+  LI G    G   +A ++F +M +    P V   N L+  LCK G++++A 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 347 DVFDTMAMKGQNPDVF--------------SYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDI T+N LI  +   G ++ A+ +F E++  G++P  VTY T+I  L R+ + +DA  
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           K G V +A Q + ++   +    L P    Y + + G C  G++++AL +F  +V     
Sbjct: 513 KLGRVMDA-QNIFDLTVNVG---LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-- 566

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              P+ V    L++G CK G +D  + +F   L+ G      + N ++  L   +  + V
Sbjct: 567 -IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF--EAGRTV 623

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A      M   G  ++ C Y
Sbjct: 624 PAKVKFHEMTESGIAMNKCTY 644



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 1/188 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ ++I G ++ G    A   F +M E     +   Y+ VL   F+ + F  A+ ++ E+
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             +N   +I+T + +I G+ ++ + E A  +   +++ G++P   TY+I+I+ L +    
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLV 727

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  +F  M+++GC PD    N ++    K   +  A A L   ++  F     +   L
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787

Query: 280 IDGLFRAK 287
           +D LF +K
Sbjct: 788 VD-LFSSK 794


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 251/536 (46%), Gaps = 14/536 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF ++      P +  +  +L    + + +   L++  +M      PN+ T ++L
Sbjct: 38  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 97

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+T +I GLC   +  EA  LF KM D G 
Sbjct: 98  INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 157

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK+     A+ LLRS E+    P +  Y+ +ID L + ++  EA+ 
Sbjct: 158 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 217

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + I PD+  Y  ++  L    + K    LL+ M    I+PD   ++ ++   C
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 277

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +   + +R   P+  T+T L+ G C    +D+A K+F+ M + G  P V 
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  LI+G CK  +++KA  LF +M                  + D  +  T++   C  
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEM-------------CRKEWIPDTKTYNTLMHGLCHV 384

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A  +  ++   G +PD++TY+ L++  CK  ++  A+ L K ++   L PD   Y
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             +I+G+ R    E A  +F  +   G  PS   Y  ++   C+R   + A  L+++   
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 504

Query: 595 DISGRDDESMKSIEE-FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           +    D  +  +I   FLQ  E   AIQ L EM  +     ++  T+ +  L  DG
Sbjct: 505 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 15/460 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +     A     K+ +   QPD   +  ++     +     AL ++ +M+  
Sbjct: 96  ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+VT+  LINGL K G T  AI++L  M Q    P+   YT +I  LC+  +  EA
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF +M   G SPD   Y +L++  C L        LL        +P +  +S ++D 
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA+     M +  +EPDVV Y  ++ G     ++ +A+K+   M  +G  PD
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 335

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  LI G+C +  +D+A  L  E+ +++ +P+T T+  L+ G+C  G + DA  LF+
Sbjct: 336 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFH 395

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDK 461
           +M   G  P +  ++ L+D LCK   LE+A  L   +E    NP              D 
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP--------------DI 441

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                +++  C AG +  A  +   L+  G  P + TYN +I+G CK G +N A KLF E
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +      PD  TY T+  G  + +    A ++  +M   G
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 541



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 218/465 (46%), Gaps = 52/465 (11%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
              L+ + +DE    NV      +  LI+G  KVG+   A+     M++ +CQPDV IY 
Sbjct: 145 ALHLFDKMIDEGFQPNVVT----YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT 200

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           ++++   + +    A  ++ +MV     P+I T++ L++ L    + +    +L++M   
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            ILP+   ++ V+  LC+  +  EA+ +   M   G  PD V Y  L++G C    +DEA
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + +     + GF P + SY+ LI+G  +  + D+A   + +M  ++  PD   Y  ++ G
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L   G+++DA+ L  +M  RG +PD   Y+ L+   C    L++A +L   I   +  P+
Sbjct: 381 LCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPD 440

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              + I+I GMCR G ++ A+ LF+ +   G  PSV  +N +I GLCK G L +AN LF 
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +M+              GN               C+                    PD  
Sbjct: 501 EMD--------------GND--------------CS--------------------PDGC 512

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           TYN++  GF +      A++L +E+  +G   D  T   L+  L 
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 242/528 (45%), Gaps = 16/528 (3%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  D+A   F ++      P  V +  LL    K++     L+L    +  G  P + 
Sbjct: 33  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 92

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + LI+      R   A++   K+ +   +PD   +  +IRGL   GK+ +A+ L   M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  P+   Y  LI G C +G    A  L   + + +  P+   +T +I  +C++  V
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            +A  LF++M   G  P +  + +L+  LC   E +    L  +M   K           
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK----------- 261

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              + D     T+V+  C  G + +A++I+  + + G  PD++TY +L++G C    ++ 
Sbjct: 262 --ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDE 319

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+K+F  +  KG  PD ++Y TLING  ++ + + A  +F +M +    P    Y +LM 
Sbjct: 320 AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMH 379

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLNDF 633
             C   +   A +L+ + +      D  +   + + L K   +E A+  L  ++    + 
Sbjct: 380 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNP 439

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +  Y I + G+C+ G+++ A ++FS L       +  +   +IHGLCKRG L+ A  +F
Sbjct: 440 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 499

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           +    +G    P  C Y   +  F ++N+ + A  LL  M + G+  D
Sbjct: 500 MEM--DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 545



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 151/303 (49%), Gaps = 2/303 (0%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           N  ++ DV  F  ++    K G   +A E    M +   +PDV  Y  +++    +    
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 318

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A+ V+  MV+    P++++++ LING  K  K + A+ + +EM ++  +P+  TY  ++
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            GLC + R  +A  LF +M   G  PD V Y+ LL+  CK   ++EA+ALL++ E     
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLN 438

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P +  Y+ +IDG+ RA   + A   +  +  + + P V  Y +MI GL + G + +A KL
Sbjct: 439 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M      PD   YN + +GF       +A  L  E+  R    +  T T+L+  +  
Sbjct: 499 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558

Query: 391 NGM 393
           +G+
Sbjct: 559 DGL 561



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 140/307 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S V+  L K        + +D +    V      +  L+ G+    + ++A++ F  M  
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  Y  ++N   +      A+ ++ EM +   +P+  T++ L++GL   G+ + 
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  EM  RG +P+  TY+I++  LC+    +EA  L   ++ S  +PD   YN +++
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+   ++ A  L  +    G  P + +Y+ +I GL +    +EA   + +M      P
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D   Y  + RG  +  +   A++LL +M  RG   D      L++   D GL   +  L 
Sbjct: 510 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLM 569

Query: 367 VEIWKRD 373
           + +   D
Sbjct: 570 LSVLSED 576



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 78/169 (46%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F     R ++    + S ++  L K    +     L  + + N++    V+ ++
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I G  + G+ E A + F  +      P V+ YN +++   ++ L   A  ++ EM   +C
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDC 507

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            P+  T++ +  G  ++ +T  AI++L+EM  RG   +  T T+++  L
Sbjct: 508 SPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 247/524 (47%), Gaps = 21/524 (4%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK- 123
           ++ A +  L      D     L E+R   V          +  + + G  ++AL++F + 
Sbjct: 57  AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116

Query: 124 MKEFDCQ--PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           + +  C    +  +YN +++   R+ +    + VY  M K    PN+ T++LL+  L ++
Sbjct: 117 VHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQN 176

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            +   A KMLDEM ++G  P+  TY  ++S LC+++R DEA  +   M      P   +Y
Sbjct: 177 NRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASY 231

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NA++   C+  R+ E  +++      G  P + +Y+ ++D   +A     A A   +M  
Sbjct: 232 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 291

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               P+VV +  ++RGL + G+V DA+ +   M   G  P T  YN LI+G C +G L  
Sbjct: 292 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKG 351

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+   + +    PN  T++ LI G  + G +  A  ++N M ++GC P+V ++  ++D
Sbjct: 352 ASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVD 411

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             CK     +A  L  KM +   P              +  +  T++   C    + +A 
Sbjct: 412 VFCKKLMFNQAKSLIDKMLLENCPP-------------NTVTFNTLIRSLCDCRRVGRAL 458

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +  ++   G +P+  TYN LI+G  + GN   AL +  E+Q  G+    VTY T+++GL
Sbjct: 459 GVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 518

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            +     +A    G+M   G  P+   + +++   C+  +  +A
Sbjct: 519 CQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 562



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 235/493 (47%), Gaps = 31/493 (6%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI+ L +       + + D M + G+ PN FTY +++  LCQ NR   A ++  +M 
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             GC PD V Y  +++  CKL R+DEA  +L +       P   SY+ ++  L R  R  
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQ 245

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           E ++    M    ++P+V+ Y  ++    +AG+++ A  +L+ M   G  P+   + AL+
Sbjct: 246 EVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALV 305

Query: 351 KGFCDLG----LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           +G  D G     LD  R +  E W     P+T ++ ILI G+C  G +  A  + N ME+
Sbjct: 306 RGLFDDGRVHDALDMWRWMVAEGWA----PSTVSYNILIRGLCSVGDLKGASSILNSMEQ 361

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQ 465
            GCFP+V  ++ LIDG  KAG+L  A  ++  M   G  P + +                
Sbjct: 362 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV--------------YT 407

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            MV+ +C   + ++A  ++ ++      P+ +T+N+LI   C    +  AL +F E++  
Sbjct: 408 NMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRH 467

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR--KFS 583
           G  P+  TY  LI+GL R     DA  +  +M  +G   S   Y ++++  C+ R  + +
Sbjct: 468 GCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREA 527

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           + F +    ++ I          I  + ++GEV  A   L  M+       +  YTI + 
Sbjct: 528 MVF-VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 586

Query: 644 GLCQDGQVKEALN 656
            LC   ++ +A+ 
Sbjct: 587 ELCNQDKLVDAMT 599



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 210/476 (44%), Gaps = 20/476 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L + N      + LDE+           +  ++S   K+   ++A E    M    
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP--- 225

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P    YNA++    R+       +V  +MV     PN++T++ +++   K+G+  +A 
Sbjct: 226 --PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 283

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L  M   G  PN  T+T ++ GL    R  +A  ++  M   G +P  V+YN L+ G 
Sbjct: 284 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C +  +  A ++L S E+ G  P + +YS LIDG  +A     A + +  M     +P+V
Sbjct: 344 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 403

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V+Y  M+    +      A  L+  M      P+T  +N LI+  CD   + +A  +  E
Sbjct: 404 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 463

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +   +PN  T+  LI G+ R G   DA  +  +M+  G   S+  +N ++ GLC+   
Sbjct: 464 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 523

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
             +A +   KM + G  P  F              +   ++  YC  G +  A  +L  +
Sbjct: 524 SREAMVFVGKMIVQGIQPNAF--------------TFSAIIHAYCKEGEVRMAAWMLGAM 569

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                  +I+ Y  L+   C    +  A+    ++  +G+ P++VT+  L+ G+ R
Sbjct: 570 NVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 625



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 137/291 (47%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G   VGD + A      M++  C P+V  Y+ +++   +      A++++ +M 
Sbjct: 336 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 395

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+V ++ +++   K      A  ++D+M      PN  T+  +I  LC   R  
Sbjct: 396 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 455

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +F +M+  GC P+   YN L++G  +     +AL ++   +  G    L +Y+ ++
Sbjct: 456 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 515

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL + +   EA  +  KM  + I+P+   +  +I    + G+V+ A  +L  M      
Sbjct: 516 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCH 575

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +   Y  L+   C+   L  A +  +++      PNT T+ +L+ G+ RN
Sbjct: 576 RNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 626



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/495 (21%), Positives = 205/495 (41%), Gaps = 28/495 (5%)

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY-AWYRK 298
           A+ A +        VD     L+     G     G+    +    RA   D A   +YR 
Sbjct: 57  AHEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 116

Query: 299 MFE----EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           + +       EP   LY  +I  L     V   + +  +MR+ G+ P+ + YN L++  C
Sbjct: 117 VHDLGCARPTEPR--LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALC 174

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               +  AR +  E+ ++   P+  T+  ++  +C+   +D+A ++   M      P   
Sbjct: 175 QNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAA 229

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +NA++  LC+   +++   +   M   G  P +               +  T+V+ +C 
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI--------------TYTTIVDAFCK 275

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           AG +  A  IL ++  +G  P+++T+ +L+ G    G ++ AL +++ +  +G  P +V+
Sbjct: 276 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 335

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI GL  V   + A  I   M Q+GC P+   Y +L+    +      A S+W    
Sbjct: 336 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 395

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLE-MDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           R     +     ++ +   K  + N  + L++ M  +        +   +  LC   +V 
Sbjct: 396 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 455

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            AL +F  +     +    +  +LIHGL + G    A+ +      +G  L     N ++
Sbjct: 456 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 515

Query: 713 RSLLFSKDNKKVHAY 727
             L  ++ +++   +
Sbjct: 516 SGLCQTRMSREAMVF 530


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 213/406 (52%), Gaps = 18/406 (4%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF-L 227
           VT+++LI G   +   + A  +L EM   G+  N  T +I++ GLC+  R  +A   F  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRA 286
            ++ +   PD V+Y  L+NG CKL RVD A  L R      G  P   +Y+ L+DGL + 
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R D A A   +  +    PDVV Y  ++  L + G+V +A+   + M E G VP    +
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NA+I G C    L  A  +  E+  RD  PN  T++++I G+C++  +D+AQ+L ++M  
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            GC P +  +  L+ G   AG L+ A  L  +M           +SQG   + D  +   
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM-----------VSQGC--IPDVVTYTV 312

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++++ C  G +  A++I  +L  +   P+++TY++LI G+C+   ++   K+ +E+    
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---A 369

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            RP+ VTY T+I GL  VDR E+A+ +F +M + G  P    Y+ L
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 214/451 (47%), Gaps = 53/451 (11%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + VLI G+    D + A     +M     Q +    + +L    R      AL  + 
Sbjct: 25  SVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFD 84

Query: 158 EMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG-ILPNKFTYTIVISGLCQ 215
             ++L +  P++V+++ LINGL K G+ + A  +  +M   G   PN FTY  ++ GLC+
Sbjct: 85  ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            +R D A  +  + +    +PD V YN L+    +L RVDEALA      ++G+VP L S
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ +I GL RA+R  +A   + +M +    P++V Y V+I GL ++ ++ +A +LL  M 
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G  PD   Y  L+ GF   G LD A  L   +  +  +P+  T+T++I  +C+ G VD
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           DA ++F ++    C P+V  ++ALI G C+A                       R+ +GG
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRAS----------------------RVDEGG 362

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                    + M E  C                     P+++TYN++I G   V     A
Sbjct: 363 ---------KVMREMACR--------------------PNVVTYNTMIWGLSMVDRNEEA 393

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
             +F+E+   G  PD+ TY  L   L+ +D+
Sbjct: 394 YGMFREMSECGFVPDARTYRGLKRALRMIDQ 424



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 173/343 (50%), Gaps = 17/343 (4%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN L+ GFC    +D A +LLR  + +G      + S ++ GL R  R  +A   +  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 299 MFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDL 356
             E    +PDVV Y  +I GL + G+V  A  L   M    G  P+ + YNAL+ G C  
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             LD AR++  E  KRD  P+  T+  L+  + + G VD+A   F +M + G  P++  F
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           NA+I GLC+A  L  A  +F +M +   +P L               +   +++  C + 
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLV--------------TYSVVIDGLCKSD 251

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A ++L ++   G  PD++ Y  L+ GF   G ++ AL L + +  +G  PD VTY 
Sbjct: 252 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 311

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +I+ L +V R +DA  IF ++  N C+P+   Y +L+   CR
Sbjct: 312 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 166/335 (49%), Gaps = 9/335 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFF--IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL 86
           +S TT+ + + K       F  F  + AA   R  +F  N A++  L K +  D     +
Sbjct: 97  VSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYN-ALVDGLCKQDRLDAARAVI 155

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
            E R  + +     +  L++  +++G  ++AL +F +M E    P +  +NA++    R 
Sbjct: 156 TEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRA 215

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    AL V+ EM+  +  PN+VT+S++I+GL KS + + A ++LD M   G  P+   Y
Sbjct: 216 RRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAY 275

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T ++ G     R D A  L  +M   GC PD V Y  +++  CK+ RVD+A  + R    
Sbjct: 276 TPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 335

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           +   P + +YS LI G  RA R DE     R+M      P+VV Y  MI GLS   + ++
Sbjct: 336 NKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEE 392

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           A  +  +M E G VPD   Y  L +    L ++DQ
Sbjct: 393 AYGMFREMSECGFVPDARTYRGLKRA---LRMIDQ 424



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 204/472 (43%), Gaps = 55/472 (11%)

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           + RA  +++A   +R+    ++    V Y V+IRG   A  +  A  LL +M   G+  +
Sbjct: 1   MVRAGSHNQALQLFREN-PCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 343 TYCYNALIKGFCDLGLLDQA-RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               + +++G C  G + QA       +    + P+  ++T LI G+C+ G VD A  LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 402 NKMEKAG-CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            KM  AG C P+   +NAL+DGLCK   L+ A  +  +             ++  +   D
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITE-------------ARKRDFAPD 166

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++      G + +A     Q+ E G +P ++++N++I G C+   +  AL++F 
Sbjct: 167 VVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFN 226

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  +   P+ VTY  +I+GL + D+ ++A ++  +M   GC P    Y  L+       
Sbjct: 227 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV------- 279

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
              L FS         +GR D ++  +   + +G + + +                 YT+
Sbjct: 280 ---LGFS--------AAGRLDSALGLLRRMVSQGCIPDVVT----------------YTV 312

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            +  LC+ G+V +A  IF  LV  K      +   LI G C+   +D    V        
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM-----RE 367

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
              RP V  Y       S  ++   AY +   M   G+  DA  Y   K  L
Sbjct: 368 MACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 242/496 (48%), Gaps = 33/496 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F ++I+G  + G  ++  E   +M      PD   YN ++N   ++  F  AL ++ EM
Sbjct: 55  TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    PN+VT++ LIN + K+G    A++  D+M  RG+ PN+ TYT +I+G  Q    
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEAYR+  +M  SG  P  V YNAL+NG C L R++EA+ LL+     G +P + SYS +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  R +  D A+    +M  + + PD V Y  +I+GL E  ++ +A  +  +M    +
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y  LI  +C  G L++A  L  E+ ++  LP+  T+ +LI G+ +     +A++
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L  K+      PS   +N LI+  C        N+ F                       
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIENCC--------NIEF----------------------- 383

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              S   +V+ +C  GL+ +A ++   +    + P+   YN +I+G C++GN+  A KL+
Sbjct: 384 --KSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLY 441

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           KE+      P +VT   L+  L     + +   + G + ++       + K L+  + + 
Sbjct: 442 KEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKE 501

Query: 580 RKFSLAFSLWLQYLRD 595
               + F+L  +  +D
Sbjct: 502 GNMDMVFNLLTEMAKD 517



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 265/574 (46%), Gaps = 76/574 (13%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           + L  + EM +  CLPN+VT++ +I+G  K  +T+ A   L  M  +G+ PN  T+ ++I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +GLC+  R  E   + ++M   G  PD V YN L+NG+CK     +AL L     ++G  
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +Y+ LI+ + +A   + A  ++ +M    + P+   Y  +I G ++ G + +A ++
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L++M   G +P    YNALI G C LG +++A  L  ++  +  LP+  +++ +I G  R
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           N  +D A ++  +M      P    +++LI GLC+   L +A  +F +M   K P     
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPP---- 296

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D+ +  T++  YC  G ++KA  +  ++ + G LPD +TYN LING  K  
Sbjct: 297 ---------DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQA 347

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE---------------EDAFRIFG 555
               A +L  +L      P +VTY TLI     ++ +               ++A ++F 
Sbjct: 348 RSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFE 407

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M      P+ A+Y  ++   CR      A+ L+ +                        
Sbjct: 408 SMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKE------------------------ 443

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-------DGQVKEALNIFSVLVECKAIV 668
                  ++ +DF        P+T+ ++ L +       DG++ E   I  +L  CK   
Sbjct: 444 -------MVHVDF-------VPHTVTVLALVKALFTEGMDGELNEV--IGDILRSCKLTD 487

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              S V L+    K G +D+  ++     K+G I
Sbjct: 488 AELSKV-LVEINQKEGNMDMVFNLLTEMAKDGLI 520



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 24/371 (6%)

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ +   LPN  T+  +I G C+    D+A      M   G  P++  FN +I+GLC+ G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            L++ + +  +M            S+ G  V D+ +  T+V  YC  G  H+A  +  ++
Sbjct: 68  RLKETSEVLVEM------------SRKG-YVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +G  P+++TY SLIN  CK GN+N A++ F ++ ++GL P+  TY T+ING  +    
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDES 603
           ++A+R+  +M ++G  PS   Y +L+   C   +   A  L    L+D+ G+    D  S
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGL----LQDMVGKGVLPDVVS 230

Query: 604 MKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
             +I   F +  E++ A Q  +EM  K        Y+  + GLC+  ++ EA ++F  ++
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
             K      +   LI+  CK G L+ A+ +    ++ GF+      N L+  L  +K  +
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL--NKQAR 348

Query: 723 KVHAYHLLCRM 733
              A  LL ++
Sbjct: 349 SKEARRLLLKL 359



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 182/412 (44%), Gaps = 20/412 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T++ + + K  N      FF     R    +  + + +I+   +    D  ++ L+E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 89  L-RSGNV-SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           + RSG + S+V+  +  LI+G+  +G  E+A+     M      PDV  Y+ +++   R 
Sbjct: 184 MTRSGFIPSIVT--YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           Q    A  +  EM+  + LP+ VT+S LI GL +  +   A  M  EM    + P++FTY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T +I+  C+    ++A  L  +M   G  PD V YN L+NG  K  R  EA  LL     
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 267 DGFVPRLGSYSCLID---------------GLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           D  +P   +Y+ LI+               G       DEA   +  M  +  +P+  +Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            V+I G    G V  A KL  +M     VP T    AL+K     G+  +   +  +I +
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILR 481

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM-FNALIDG 422
              L +     +L+    + G +D    L  +M K G  PS G   NA+  G
Sbjct: 482 SCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAIARG 533



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 128/281 (45%), Gaps = 14/281 (4%)

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++  +G LP+++TYN++I+G+CK+   + A    + + LKGL P+ +T+  +INGL R  
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R ++   +  +M + G  P    Y +L+   C+   F  A  L  + +R+    +  +  
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSV 660
           S I    + G +  A++   +M  +     L P    YT  + G  Q G + EA  + + 
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVR----GLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           +     I +  +   LI+G C  G ++ A+ +    +  G +  P V +Y      F+++
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVL--PDVVSYSTIISGFARN 241

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
            +   A+ +   M       DA  Y    SL+ G    R +
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTY---SSLIQGLCEQRRL 279


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/550 (29%), Positives = 258/550 (46%), Gaps = 30/550 (5%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           ++ TL   + I+  +   +PAL  L   L   T  S+       +  F F   AA R RL
Sbjct: 96  DARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSI-------REIFEFL--AASRDRL 146

Query: 61  RSFASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
             F S S V   L+K     N  D  ++    ++   V    +    L+S + K+   E 
Sbjct: 147 -GFKS-SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEA 204

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A   + +M     +  VY +N ++N+  ++     A      M      PNIVT++ +++
Sbjct: 205 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVH 264

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G   SG+ E A  +L  M ++ I P+ FTY  +ISG+C+  R +EA ++F +M   G  P
Sbjct: 265 GYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRP 324

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             V YN L++GFC    +D A A      K G  P + +Y+ LI  LF  +R DEA    
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMI 384

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           +++ E+ I PD + Y ++I G       K A  L  +M   GI P    Y +L+      
Sbjct: 385 KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKK 444

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             + +A  L  +I     LP+   F  LI G C N  V  A +L   M++    P    F
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504

Query: 417 NALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N ++ G C+ G++E+A  LF +M+  G  P              D  S  T++  Y   G
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKP--------------DHISFNTLISGYSRRG 550

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I  A+++  ++ ++G  P ++TYN+L+ G CK    + A +L KE+  KG+ PD  TY 
Sbjct: 551 DIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYF 610

Query: 536 TLINGLQRVD 545
           TLI G+ +V+
Sbjct: 611 TLIEGIAKVN 620



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 224/476 (47%), Gaps = 13/476 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF  LI     +   ++A E F  MKE    P +   N++L++  +      A  +Y 
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM +L    ++ TF+++IN L K GK + A   +  M   G+ PN  TY  ++ G C   
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R + A  +   MK     PD   Y +L++G CK  R++EA  +     + G  P    Y+
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG       D A A+  +M ++ I P +  Y  +I  L    +  +A  ++ +++E+
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI PD   YN LI G+C      +A  L  E+      P   T+T L+  + +   + +A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF K+   G  P   MFNALIDG C    ++ A  L   M+  K P            
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP----------- 499

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +  T+++ +C  G + +A ++  ++   G  PD I++N+LI+G+ + G+I  A +
Sbjct: 500 --DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  E+   G  P  +TY  L+ GL +    + A  +  +M   G TP    Y +L+
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 228/468 (48%), Gaps = 24/468 (5%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + F  LI       + + A +    M ++G+LP   T   ++S   ++NR + A+ L+ +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M           +N ++N  CK  ++ +A   +   E  G  P + +Y+ ++ G   + R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A A    M  +KIEPD   YG +I G+ + G++++A K+  +M ++G+ P    YN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI GFC+ G LD A + + E+ K+   P   T+  LI  +      D+A+ +  ++++ G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT--------------------- 446
             P    +N LI+G C+    +KA LL  +M   G  PT                     
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 447 -LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            LF +++  G  + D      +++ +C+   +  A+++L  +      PD +T+N+++ G
Sbjct: 452 DLFKKITSEG-VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G +  A +LF E++ +G++PD +++ TLI+G  R    +DAFR+  +M   G  P+
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
              Y +L+   C+ ++  LA  L  + +      DD +  ++ E + K
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 225/467 (48%), Gaps = 20/467 (4%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + ++ L+   C + R DEA     + ++ G +P + + + L+    +  R + A+  Y +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           MF  +I+  V  + +MI  L + GK+K A   +  M   G+ P+   YN ++ G+C  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ A ++   + ++   P++ T+  LI GMC+ G +++A K+F +M + G  PS  ++N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 419 LIDGLCKAGELEKANLLFYKMEI---GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           LIDG C  G L+ A+   YK E+   G +PT    +S   + +H     Q   E  C   
Sbjct: 332 LIDGFCNKGNLDMASA--YKDEMLKKGISPT----MSTYNSLIHALFMEQRTDEAEC--- 382

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
                  ++ ++ E G  PD ITYN LING+C+  N   A  L  E+   G++P   TY 
Sbjct: 383 -------MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYT 435

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +L++ L + +R ++A  +F ++   G  P   ++ +L+   C       AF L     R 
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRM 495

Query: 596 ISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               D+ +  +I +   ++G+VE A +   EM  +        +   + G  + G +K+A
Sbjct: 496 KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA 555

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             + + +++     T  +   L+ GLCK    DLA ++    +  G 
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 3/343 (0%)

Query: 56  KRKRLR--SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           KR+++   SF   S +IS + K    +   +  +E+    +   + ++  LI G+   G+
Sbjct: 283 KRQKIEPDSFTYGS-LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            + A     +M +    P +  YN++++  F +Q    A  +  E+ +    P+ +T+++
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LING  +    + A  + DEM   GI P K TYT ++  L + NR  EA  LF K+   G
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD + +NAL++G C    V  A  LL+  ++    P   +++ ++ G  R  + +EA 
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M    I+PD + +  +I G S  G +KDA ++ ++M + G  P    YNAL++G 
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           C     D A  L  E+  +   P+  T+  LI G+ +  + D+
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 165/387 (42%), Gaps = 49/387 (12%)

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G      +++  + L+  R+R     +  ++ LIK  CD+   D+A      + ++  LP
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLP 184

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T   L+    +    + A  L+ +M +     SV  FN +I+ LCK G+L+KA    
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 437 YKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             ME  G  P +               +  T+V  YC++G +  A  IL  +      PD
Sbjct: 245 GHMETSGVKPNI--------------VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPD 290

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TY SLI+G CK G +  A K+F+E+  KGLRP +V Y TLI+G       + A     
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M + G +P+ + Y SL+             +L+++       R DE+   I+E  +KG 
Sbjct: 351 EMLKKGISPTMSTYNSLI------------HALFMEQ------RTDEAECMIKEIQEKGI 392

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             +AI                 Y I + G C+    K+A  +   ++      T  +   
Sbjct: 393 SPDAIT----------------YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           L+H L K+  +  A D+F      G +
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVL 463



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 124/304 (40%), Gaps = 44/304 (14%)

Query: 447 LFLRLSQGGNRVHDKASL--QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           +F  L+   +R+  K+S+    +++  C      +A++    + E G LP I T NSL++
Sbjct: 135 IFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLS 194

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            F K+     A  L+ E+    ++    T+  +IN L +  + + A    G M  +G  P
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP 254

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           +   Y +++   C   +   A ++     R                 QK E ++   G L
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKR-----------------QKIEPDSFTYGSL 297

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLC 681
                            + G+C+ G+++EA  IF  +V+ K +   PS V    LI G C
Sbjct: 298 -----------------ISGMCKQGRLEEASKIFEEMVQ-KGLR--PSAVIYNTLIDGFC 337

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            +G LD+A       LK G        N L+ +L    + +   A  ++  ++  G   D
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM--EQRTDEAECMIKEIQEKGISPD 395

Query: 742 ACLY 745
           A  Y
Sbjct: 396 AITY 399


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 253/539 (46%), Gaps = 64/539 (11%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY-------- 156
           I+GY K G  +KA++ F +M + +C+     YN  + +      F LA   Y        
Sbjct: 16  IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75

Query: 157 ---------------------------YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
                                      ++M  LNCLP+I  F++ ++ L   G+ ++A++
Sbjct: 76  SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + +++ + G  P+  TYTI+I G+C+I + D A + +  M   G SPD  A  A++ G C
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGS--YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             R+VD A  L+    K G V +L +  Y+ LI G  RA R D+A A    M     EPD
Sbjct: 196 DGRKVDLAYELIIDVMKSGRV-KLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPD 254

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y V +    +   + DA KLL  M   GI PD Y YN L+KG C     D+A  L  
Sbjct: 255 LVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMT 314

Query: 368 -EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++W +  L +  ++  +I   C+ G    A KLF +M + G  P V  F   I      
Sbjct: 315 NKMWPK-GLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGK 373

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G    A  L  +M E+G +P              D     T+++  C +G +  A+ I  
Sbjct: 374 GSFNIAKKLLDQMTEMGLSP--------------DCIFYTTIIDHLCKSGKVEMAHSIFC 419

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E G  PD+I++N+LINGFCK   ++ A+ L++E+Q +G  PD VTY  +I GL    
Sbjct: 420 DMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEK 479

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLM---------TWSCRRRKFSLAFSLWLQYLRD 595
           +   A  ++GQM   G T   A+ ++L+         T  C   KF   +S   + ++D
Sbjct: 480 KISIACMVWGQMMDKGFTLDRAIAQTLIRGNSIENASTSRCLDFKFHQNYSPSFRIIKD 538



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 242/504 (48%), Gaps = 29/504 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ V+ EM + NC    + ++  I  L    + ++A     +M  RG   + FTY+  I+
Sbjct: 28  AVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFIT 87

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC++        L   M+   C PD  A+N  L+      R+D AL +     K+G  P
Sbjct: 88  GLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKP 147

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +I G+ + K++D A  ++R M  +   PD    G ++ GL +  KV  A +L+
Sbjct: 148 DVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELI 207

Query: 332 SDMRERGIVP-DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            D+ + G V   T  YNALI GFC  G +D+A++++  + +    P+  T+ + +   C 
Sbjct: 208 IDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCD 267

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY-KM---------- 439
             M+DDA+KL   ME++G  P V  +N L+ G+CK    +KA LL   KM          
Sbjct: 268 ELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVS 327

Query: 440 ---------EIGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
                    +IG   + +    + G +    D  +    ++ +   G  + A K+L Q+ 
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G  PD I Y ++I+  CK G +  A  +F ++  +G+ PD +++  LING  +  R  
Sbjct: 388 EMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVS 447

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           +A  ++ +M   G  P    YK ++      +K S+A  +W Q +      D    ++I 
Sbjct: 448 EAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLD----RAIA 503

Query: 609 EFLQKG-EVENAIQGLLEMDFKLN 631
           + L +G  +ENA      +DFK +
Sbjct: 504 QTLIRGNSIENASTSRC-LDFKFH 526



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 213/482 (44%), Gaps = 50/482 (10%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L SF + S  I+ L K   F    + L ++ + N       F + +   +  G  + ALE
Sbjct: 77  LSSF-TYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F K+ +   +PDV  Y  +++   + + F  A+  + +M+     P+      ++ GL 
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195

Query: 180 KSGKTEVAIKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
              K ++A +++ ++ + G +  +   Y  +ISG C+  R D+A  +   M+ +GC PD 
Sbjct: 196 DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN  LN FC    +D+A  LL+  E+ G  P + SY+ L+ G+ +    D+AY     
Sbjct: 256 VTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTN 315

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
               K   DVV Y  +I+   + G    A KL  +M ++GI PD   +   IK F   G 
Sbjct: 316 KMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGS 375

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            + A+ L  ++ +    P+   +T +I  +C++G V+ A  +F  M + G  P V  FNA
Sbjct: 376 FNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNA 435

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           LI+G CK   + +A  L+ +M+               NR                     
Sbjct: 436 LINGFCKCSRVSEAMHLYEEMQ---------------NR--------------------- 459

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
                       G+ PD +TY  +I G  +   I+ A  ++ ++  KG   D     TLI
Sbjct: 460 ------------GSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507

Query: 539 NG 540
            G
Sbjct: 508 RG 509



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 100/468 (21%), Positives = 193/468 (41%), Gaps = 40/468 (8%)

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           ++Y   I G  +AG +  A+++  +M +      +  YN  I    +    D A     +
Sbjct: 10  LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQ 69

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  R    ++ T++  I G+C+        +L + ME   C P +  FN  +  L   G 
Sbjct: 70  MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129

Query: 429 LEKANLLFYKM-EIGKNPTL--FLRLSQGGNRVH-------------------DKASLQT 466
           ++ A  +F K+ + G+ P +  +  +  G  ++                    D  +   
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +V   C    +  AY++++ + +SG +    + YN+LI+GFC+ G I+ A  +   ++  
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR-----RR 580
           G  PD VTY   +N        +DA ++   M ++G  P    Y  L+   C+     + 
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
              +   +W + L D+   +      I+ F + G+  +A +   EM  K     +  +TI
Sbjct: 310 YLLMTNKMWPKGLCDVVSYN----TIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTI 365

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTL 697
           ++      G    A  +   + E   +   P C+    +I  LCK G +++A  +F   +
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTE---MGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMV 422

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + G  + P V ++      F K ++   A HL   M++ G   D   Y
Sbjct: 423 EQG--ISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTY 468



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 84/190 (44%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K L    S + +I    K       ++  +E+    +      F + I  +   G    A
Sbjct: 320 KGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIA 379

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            +   +M E    PD   Y  +++   +     +A +++ +MV+    P++++F+ LING
Sbjct: 380 KKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALING 439

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             K  +   A+ + +EM  RG  P++ TY ++I GL +  +   A  ++ +M D G + D
Sbjct: 440 FCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLD 499

Query: 238 FVAYNALLNG 247
                 L+ G
Sbjct: 500 RAIAQTLIRG 509


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 265/587 (45%), Gaps = 42/587 (7%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           VL+ G    G  E+ L+         C P V  YN +++   R+      L +  EM   
Sbjct: 209 VLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAK 268

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
             LP +VT+  LIN L K G  E    +  EM +RG+ PN   Y  VI  LC+   A +A
Sbjct: 269 GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQA 328

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +  +M  SGC PD + +N L+ G C    V +A   LR   +    P   SY+ LI G
Sbjct: 329 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 388

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                    A     +M      PDVV +G +I GL  AGKV +A+ +   M ER + PD
Sbjct: 389 FCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 448

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C   +L  A+++  E+ +++  P+   +  LI G  R+  + DA+K+F 
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
            ME  G  P +   NA+I G C+ G + +A L    M ++G  P              D+
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP--------------DE 554

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  Y   G ++ A + L  + +    P+++TY+SLING+CK G+ + A  LF  
Sbjct: 555 FTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFAN 614

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +Q + L P+ VTY  LI  L + D+   A   F  M  N C+P+                
Sbjct: 615 MQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN---------------- 658

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL----EMDFKLNDFQLAP 637
                 + L YL  ++G    +   I          +    LL    ++ F + D + + 
Sbjct: 659 -----DVTLHYL--VNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSA 711

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           Y   +  LC+   ++EAL+  + + +   +  P + + L++G C  G
Sbjct: 712 YNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 215/480 (44%), Gaps = 37/480 (7%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+   K GD EK    F +M++    P+V IYN+V++   +      A+ +  +M    
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+I+TF+ LI GL   G    A   L E  +R + PN+ +YT +I G C       A 
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAAS 399

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L ++M   G +PD V + AL++G     +V EAL +     +    P +  Y+ LI GL
Sbjct: 400 DLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +      A     +M E+ ++PD  +Y  +I G   +  + DA K+   M  +G+ PD 
Sbjct: 460 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 519

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
              NA+IKG+C  G++ +A      + K   +P+  T+T +I G  + G ++ A +    
Sbjct: 520 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 579

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-------IGKNPTLFLRLSQGGN 456
           M K  C P+V  +++LI+G CK G+ + A  LF  M+       +     L   L +   
Sbjct: 580 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 639

Query: 457 RVHDKASLQTMVEQYCTA----------GL-----------------IHKAYKILM---Q 486
            +      +TM+  +C+           GL                 +H    +L+   +
Sbjct: 640 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 699

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L      P    YN++I   C+   +  AL     +  KG  P+ +T+ +L+ G   V +
Sbjct: 700 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 211/497 (42%), Gaps = 17/497 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYR 224
           P       L+   + +G    A  M + +  Q G LP       ++  L +  R D+A +
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L+ +M       D  +   L+ G C   RV+E L L+ +    G +P +  Y+ LIDG  
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 250

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           R            +M  +   P +V YG +I  L + G ++    L  +MR+RG+ P+  
Sbjct: 251 RRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN++I   C      QA  +  +++     P+  TF  LI G+C  G V  A+    + 
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            +    P+   +  LI G C  GEL  A+ L  +M              G     D  + 
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM-------------MGRGHTPDVVTF 417

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++     AG + +A  +  ++ E    PD+  YN LI+G CK   +  A  + +E+  
Sbjct: 418 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 477

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           K ++PD   Y TLI+G  R +   DA +IF  M   G  P      +++   C+    S 
Sbjct: 478 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSE 537

Query: 585 AFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
           A  L +  +R +    DE   +  I  + ++G +  A++ L +M  +     +  Y+  +
Sbjct: 538 AI-LCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596

Query: 643 IGLCQDGQVKEALNIFS 659
            G C+ G    A  +F+
Sbjct: 597 NGYCKTGDTDSAEGLFA 613



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 184/413 (44%), Gaps = 2/413 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G    G   KA     +    +  P+   Y  +++    +   + A  +  EM
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P++VTF  LI+GL  +GK   A+ + ++MT+R + P+   Y ++ISGLC+ +  
Sbjct: 406 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHML 465

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  +  +M +    PD   Y  L++GF +   + +A  +    E  G  P + S + +
Sbjct: 466 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAM 525

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +     EA      M +    PD   Y  +I G ++ G +  A++ L DM +R  
Sbjct: 526 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 585

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y++LI G+C  G  D A  L   +      PN  T+TILI  + +   V  A  
Sbjct: 586 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 645

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            F  M    C P+    + L++GL         ++     E+     L +   +    + 
Sbjct: 646 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 705

Query: 460 D--KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           D   ++   ++   C   ++ +A     ++A+ G +P+ IT+ SL+ GFC VG
Sbjct: 706 DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 214/466 (45%), Gaps = 19/466 (4%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAK 287
           M  +G +P      AL+  +     + +A  +  R  E+ G +P +   + L+  L   +
Sbjct: 124 MSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQR 183

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R+D+A   Y +M  E    D     V++RGL   G+V++ +KL+      G +P    YN
Sbjct: 184 RWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYN 243

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI G+C  G + +   L  E+  +  LP   T+  LI  + + G ++    LF +M K 
Sbjct: 244 VLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKR 303

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
           G  P+V ++N++ID LCK     +A ++  +M   G +P              D  +  T
Sbjct: 304 GLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDP--------------DIITFNT 349

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++   C  G + KA   L +       P+ ++Y  LI+GFC  G +  A  L  E+  +G
Sbjct: 350 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRG 409

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             PD VT+G LI+GL    +  +A  +  +M +    P   +Y  L++  C++     A 
Sbjct: 410 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAK 469

Query: 587 SLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           ++ L+ + + + + DE + +  I+ F++   + +A +    M+ K     +      + G
Sbjct: 470 NI-LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKG 528

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            CQ G + EA+   S + +   I    +   +I G  K+G L+ A+
Sbjct: 529 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 150/344 (43%), Gaps = 15/344 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI G    G   +AL    KM E    PDV IYN +++   +K +   A  +  EM
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 475

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ N  P+   ++ LI+G  +S     A K+ + M  +G+ P+  +   +I G CQ    
Sbjct: 476 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMM 535

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA      M+  GC PD   Y  +++G+ K   ++ AL  L    K    P + +YS L
Sbjct: 536 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 595

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +    D A   +  M  E + P+VV Y ++I  L +  KV  A      M     
Sbjct: 596 INGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHC 655

Query: 340 VPDTYCYNALIKGF--CDLGLLDQARSLQVEIWKRDSL-------------PNTHTFTIL 384
            P+    + L+ G   C   +++       E+  +D+L             P    +  +
Sbjct: 656 SPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAI 715

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I  +CR+ M+ +A    N+M K G  P+   F +L+ G C  G+
Sbjct: 716 IFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 23/313 (7%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +++ VLISG  K      A     +M E + QPD ++Y  +++   R +    A  ++  
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 509

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      P+IV+ + +I G  + G    AI  +  M + G +P++FTYT VISG  +   
Sbjct: 510 MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 569

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            + A R    M    C P+ V Y++L+NG+CK    D A  L  + + +   P + +Y+ 
Sbjct: 570 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 629

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV-------------- 324
           LI  LF+  +   A  ++  M      P+ V    ++ GL+                   
Sbjct: 630 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 325 KDAM-----KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           KDA+     KL+ D+ +    P    YNA+I   C   +L +A   +  + K+  +PN  
Sbjct: 690 KDALLVVFKKLVFDIGD----PRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPI 745

Query: 380 TFTILICGMCRNG 392
           TF  L+ G C  G
Sbjct: 746 TFLSLLYGFCSVG 758



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 173/429 (40%), Gaps = 68/429 (15%)

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLL------------------------------- 359
           L  M   G  P   C  AL+  + D G+L                               
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180

Query: 360 -----DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
                D AR L  E+   DS  + ++  +L+ G+C  G V++  KL      AGC P V 
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 240

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LIDG C+ G++ +  LL  +ME  G  PTL               +  +++     
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL--------------VTYGSLINCLGK 286

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G + K   + +++ + G  P++  YNS+I+  CK  +   A+ + K++   G  PD +T
Sbjct: 287 KGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIIT 346

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           + TLI GL        A     +  +    P+   Y  L+   C R +   A  L ++ +
Sbjct: 347 FNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMM 406

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQD 648
                 D  +  + I   +  G+V  A    L +  K+ + Q+ P    Y + + GLC+ 
Sbjct: 407 GRGHTPDVVTFGALIHGLVVAGKVSEA----LIVREKMTERQVFPDVNIYNVLISGLCKK 462

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
             +  A NI   ++E    V P   V   LI G  +   L  A  +F +    G  +RP 
Sbjct: 463 HMLPAAKNILEEMLEKN--VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG--VRPD 518

Query: 707 V--CNYLLR 713
           +  CN +++
Sbjct: 519 IVSCNAMIK 527



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 134/306 (43%), Gaps = 15/306 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS L K +        L+E+   NV     V+  LI G+ +  +   A + F  M+ 
Sbjct: 453 NVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEH 512

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+   NA++    +  +   A+     M K+ C+P+  T++ +I+G +K G    
Sbjct: 513 KGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNG 572

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++ L +M +R   PN  TY+ +I+G C+    D A  LF  M+    SP+ V Y  L+ 
Sbjct: 573 ALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIG 632

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF---------------RAKRYDE 291
              K  +V  A     +   +   P   +   L++GL                     D 
Sbjct: 633 SLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDA 692

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               ++K+  +  +P    Y  +I  L     +++A+   + M ++G VP+   + +L+ 
Sbjct: 693 LLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLY 752

Query: 352 GFCDLG 357
           GFC +G
Sbjct: 753 GFCSVG 758


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 189/729 (25%), Positives = 310/729 (42%), Gaps = 120/729 (16%)

Query: 37  VIMKTKNPQVGFRFFIWAAKRKRLRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGN 93
           V  + ++ ++G + F W +  K+   F++    S+ + +L +   F+     L  LR+ N
Sbjct: 70  VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNEN 129

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLA 152
           V +  +    ++  Y + G   KA+E +  + E +D  PDV   NA+L++  + +    A
Sbjct: 130 VKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDA 189

Query: 153 LAVYYEMVKLN-----------------------------------CLPNIVTFSLLING 177
             VY EM +                                     C+PNIV ++ +I G
Sbjct: 190 RKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGG 249

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG---- 233
             K G  E A  +  E+  +G +P   T+  +I+G C+      + RL  ++K+ G    
Sbjct: 250 YCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVC 309

Query: 234 -------------------------------CSPDFVAYNALLNGFCKLRRVDEALALLR 262
                                          C PD   YN L+N  CK  + + A  LL 
Sbjct: 310 VWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLD 369

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              K G +    SY+ LI    ++K YD A     ++ E   +PD+V YG++I GL  +G
Sbjct: 370 EASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            + DA+ +   + +RG+ PD   YN L+ G C  G    A+ L  E+  R  LP+ + + 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G  R+G  D+A+K+F    + G    V   NA+I G C++G L++A     +M   
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM--- 546

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                        + V DK +  T+++ Y     +  A KI   + ++   P+++TY SL
Sbjct: 547 ----------NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSL 596

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE-EDAFRIFGQMPQNG 561
           INGFC  G+ + A + FKE+Q + L P+ VTY TLI    +     E A   +  M  N 
Sbjct: 597 INGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNK 656

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           C P+   +  L+                  +++  SGR          FL + +  N  Q
Sbjct: 657 CVPNEVTFNCLLQ----------------GFVKKTSGR----------FLGEPDGFNHGQ 690

Query: 622 GLLEMDF----KLNDF--QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             L  +F    K + +    A Y   L+ LC  G VK A  +   +V+      P S   
Sbjct: 691 SFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAA 750

Query: 676 LIHGLCKRG 684
           ++HG C  G
Sbjct: 751 ILHGFCVVG 759



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 220/504 (43%), Gaps = 75/504 (14%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + F  +I+G+ K GD   +     ++KE   +  V+  N +++  +R    +        
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL------------------ 200
           +V  +C P+I T+++LIN L K GK EVA  +LDE +++G++                  
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395

Query: 201 -----------------PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
                            P+  TY I+I GL      D+A  + +K+ D G SPD   YN 
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G CK  R   A  L         +P    Y+ LIDG  R+  +DEA   +    E+ 
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++ DVV +  MI+G   +G + +A+  ++ M E  +VPD + Y+ +I G+     +  A 
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  ++ K    PN  T+T LI G C  G    A++ F +M+     P+V  +  LI   
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635

Query: 424 CK-AGELEKA-------------------NLL---FYKMEIGK---NP------------ 445
            K +  LEKA                   N L   F K   G+    P            
Sbjct: 636 AKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFF 695

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             F R+   G   H  A+  +++   C  G++  A  +  ++ + G  PD +++ ++++G
Sbjct: 696 EFFHRMKSDGWSDHG-AAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHG 754

Query: 506 FCKVGNINGALKL-FKELQLKGLR 528
           FC VGN      + F+ L  KGL 
Sbjct: 755 FCVVGNSKQWRNMDFRNLDEKGLE 778



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 194/429 (45%), Gaps = 27/429 (6%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+    ++  + ++ +++DA K+  +M ERG   D Y    ++KG C  G +++ R L
Sbjct: 168 PDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKL 227

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             + W +  +PN   +  +I G C+ G +++A+ +F +++  G  P++  F  +I+G CK
Sbjct: 228 IEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCK 287

Query: 426 AGELEKANLLF----------------------YKMEIGKNPTLFLRLSQGGNRVHDKAS 463
            G+   ++ L                       Y+     +P   +R     +   D A+
Sbjct: 288 KGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIAT 347

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++ + C  G    A  +L + ++ G +   ++Y  LI  +CK    + A KL  +L 
Sbjct: 348 YNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLA 407

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            +G +PD VTYG LI+GL      +DA  +  ++   G +P  A+Y  LM+  C+  +F 
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF- 466

Query: 584 LAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
           L   L    + D S   D  + +  I+ F++ G+ + A +       K     +  +   
Sbjct: 467 LPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAM 526

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G C+ G + EAL   + + E   +    +   +I G  K+  +  A+ +F    KN  
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNK- 585

Query: 702 ILRPRVCNY 710
             +P V  Y
Sbjct: 586 -CKPNVVTY 593


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 246/495 (49%), Gaps = 25/495 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY-- 157
            + +LI  + + G+ + A+    KM +   +  VY YN+++N   +  L   + A YY  
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK--LGNASAAKYYFD 286

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM+     P +VT++ LI+G    G+   A K+ +EMT +GI PN +T+T +ISGLC+ N
Sbjct: 287 EMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRAN 346

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              EA RLF +MK+    P  V YN ++ G C+   + EA  LL      GFVP   +Y 
Sbjct: 347 MMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYR 406

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI GL    R  EA  +   + ++  + + + Y  ++ G  + G+ KDA+     M ER
Sbjct: 407 PLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVER 466

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+  D  CY  LI G            L  E+      P+   +T +I    + G + +A
Sbjct: 467 GVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPT-----LFL-R 450
             L++ M   GC P+V  + ALI+GLCKAG ++KA LL  +  +    P       FL  
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDH 586

Query: 451 LSQGGN-----RVHD---------KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           L++GGN     ++H            S   ++  +C  G I +A K+L  + ++  LPD 
Sbjct: 587 LTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITY+++I   CK  N+  A+KL+  +  KGL+PD++ Y  L++G       E AF +  +
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 557 MPQNGCTPSPAVYKS 571
           M + G   +    KS
Sbjct: 707 MIRRGMRSNHVTPKS 721



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 163/627 (25%), Positives = 267/627 (42%), Gaps = 82/627 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+++ LL+   F+      D++ S NV     ++  ++    ++ D  KA E    M+ 
Sbjct: 100 SALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEF 159

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAV---------------YY-----------EMV 160
             C+  + +YN +++   + +    AL +               YY           EM 
Sbjct: 160 NQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMG 219

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     N +T+S+LI+   + G+ + AI  LD+MT+  I    + Y  +I+G C++  A 
Sbjct: 220 EKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNAS 279

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A   F +M D G +P  V Y +L++G+C      +A  +       G  P   +++ +I
Sbjct: 280 AAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAII 339

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL RA    EA   + +M E KI P  V Y VMI G   +G + +A  LL +M  +G V
Sbjct: 340 SGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFV 399

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PDTY Y  LI G C +G + +A+    ++ K     N   ++ L+ G C+ G   DA   
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSA 459

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVH 459
              M + G    +  +  LIDG  +  +      L  +M   G  P              
Sbjct: 460 CRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP-------------- 505

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D      M++++  AG + +A+ +   + + G LP+++TY +LING CK G ++ A  L 
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565

Query: 520 KELQLKGLRPDSVTYG----------------------------------TLINGLQRVD 545
           KE  +  + P+ +TYG                                   LI G  R+ 
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLG 625

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + E+A ++   M  N   P    Y +++   C+R     A  LW   L D   + D    
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTML-DKGLKPDTLAY 684

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLND 632
           S   FL  G     I G LE  F+L D
Sbjct: 685 S---FLVHG---CCIAGELEKAFELRD 705



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/617 (25%), Positives = 267/617 (43%), Gaps = 58/617 (9%)

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K L +L+L     M   N +P + T S L+NGL +  +    + + D++    + P+ + 
Sbjct: 74  KVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYI 133

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA------ 259
           Y+ V+  LC++   ++A  +   M+ + C    V YN L++G CK RR+ EAL       
Sbjct: 134 YSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLM 193

Query: 260 --------------------LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
                               L +   + G      +YS LID   R    D A  +  KM
Sbjct: 194 QKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM 253

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +  IE  V  Y  +I G  + G    A     +M ++G+ P    Y +LI G+C+ G  
Sbjct: 254 TKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEW 313

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A  +  E+  +   PNT+TFT +I G+CR  M+ +A +LF +M++    PS   +N +
Sbjct: 314 HKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVM 373

Query: 420 IDGLCKAGELEKANLLFYKMEIGKN--PTLFL------------RLSQGGNRVHD----- 460
           I+G C++G + +A  L  +M +GK   P  +             R+S+    V D     
Sbjct: 374 IEGHCRSGNISEAFHLLDEM-VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDH 432

Query: 461 ----KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                     +V  YC  G    A      + E G   D++ Y  LI+G  +  +     
Sbjct: 433 HKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALF 492

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L KE+   GLRPD+V Y  +I+   +    ++AF ++  M   GC P+   Y +L+   
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552

Query: 577 CRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF-- 633
           C+      A  L  + L  D++         ++   + G +E A+Q    M   L  F  
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM---LKGFLA 609

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
               Y I + G C+ G+++EA  +   + +   +    +   +I+  CKR  L  A+ ++
Sbjct: 610 TTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLW 669

Query: 694 LYTLKNGFILRPRVCNY 710
              L  G  L+P    Y
Sbjct: 670 HTMLDKG--LKPDTLAY 684


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 262/558 (46%), Gaps = 30/558 (5%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           TV + +       V   F  WA    + R F     V +  L  N               
Sbjct: 103 TVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNK-------------- 148

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N+   ++V   ++  + + G  ++A+    +M+     P     N VL++A    L  +A
Sbjct: 149 NLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIA 208

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++ EM +    P+ V+F L++      G+   A + L+ M +RG + +  T T++I  
Sbjct: 209 ENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDA 268

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQ    +     F KM + G +P+ + + AL+NG CK   + +A  LL    + G+ P 
Sbjct: 269 FCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPN 328

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + +++ LIDGL +    ++A+  + K+   +  +P+V  Y  MI G  +  K+  A  LL
Sbjct: 329 VYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLL 388

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S M+E+G+VP+T  Y  LI G C +G   +A  L   + K    PN +T+  +I G+C+ 
Sbjct: 389 SRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK 448

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +D+A +L NK+   G       +  L+   C+  +  ++ + F KM ++G  P     
Sbjct: 449 GSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP----- 503

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  S  T++  +C    + ++ ++  +    G +P   TY S+I G+C+ G
Sbjct: 504 ---------DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N + A+KLF+ +   G  PDS+TYG LI+GL +  + +DA  ++  M   G +P      
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 571 SLMTWSCRRRKFSLAFSL 588
           +L    C++   S A ++
Sbjct: 615 TLAYEYCKKDDSSTAINV 632



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 252/526 (47%), Gaps = 26/526 (4%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++   +++GK + A+ M+ EM  +G++P+  T   V+     +   + A  +F++M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            SPD V++  ++   C + RV EA   L +  + GF+    + + +ID   +    +   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            ++ KM E  + P+V+ +  +I GL + G +K A +LL +M  RG  P+ Y +  LI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 354 CDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           C  G  ++A  L +++ + D   PN HT+T +I G C+   ++ A+ L ++M++ G  P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              +  LIDG CK G   +A  L   M + G +P ++              +   +++  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY--------------TYNAIIDGL 445

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +AY++L +++  G   D +TY  L++  C+  + N +L  F ++   G  PD 
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDI 505

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            +Y TLI+   R  + +++ R+F +    G  P+   Y S++   CR    SLA  L+ +
Sbjct: 506 HSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQ 647
                   D  +  ++   L K   E+ +     +   + D  L+P  +  + L    C+
Sbjct: 566 MSNHGCAPDSITYGALISGLCK---ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCK 622

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                 A+N+   L + + I T  +   L+  LC  G LD+A   F
Sbjct: 623 KDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFF 665



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 197/421 (46%), Gaps = 54/421 (12%)

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +++MV++   PN++ F+ LINGL K G  + A ++L+EM +RG  PN +T+T +I GLC+
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 216 INRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
               ++A+RLFLK+ +  G  P+   Y A++NG+CK  +++ A  LL   ++ G VP   
Sbjct: 342 KGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTN 401

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD- 333
           +Y+ LIDG  +   +  AY     M +E   P++  Y  +I GL + G + +A +LL+  
Sbjct: 402 TYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461

Query: 334 ----------------------------------MRERGIVPDTYCYNALIKGFCDLGLL 359
                                             M + G  PD + Y  LI  FC    +
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQM 521

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            ++  L  E      +P   T+T +ICG CR G    A KLF +M   GC P    + AL
Sbjct: 522 KESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 420 IDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I GLCK  +L+ A NL    M+ G +P    RL              T+  +YC      
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL--------------TLAYEYCKKDDSS 627

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A  +L +L +      I T N+L+   C  G ++ A   F +L  K    + VT    +
Sbjct: 628 TAINVLDRLEKR---QWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFM 684

Query: 539 N 539
           N
Sbjct: 685 N 685



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 39/348 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+GY K     +A     +M+E    P+   Y  +++   +   F+ A  +   M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    PNI T++ +I+GL K G  + A ++L++++  G+  +  TYTI++S  C+    
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + +   F KM   G +PD  +Y  L++ FC+ +++ E+  L       G +P   +Y+ +
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  R      A   +++M      PD + YG +I GL +  K+ DA  L   M ++G+
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P            C++  L    +L  E  K+D                       A  
Sbjct: 607 SP------------CEVTRL----TLAYEYCKKDD-------------------SSTAIN 631

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           + +++EK     +V   N L+  LC  G+L+ A L F+K+ + K P +
Sbjct: 632 VLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAALFFHKL-LDKEPNV 675



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 7/271 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    D  ++ L+++    +      + +L+S + +  D  ++L  F KM +
Sbjct: 439 NAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLK 498

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD++ Y  +++   R++    +  ++ E V L  +P   T++ +I G  + G T +
Sbjct: 499 VGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+   M+  G  P+  TY  +ISGLC+ ++ D+A  L+  M D G SP  V    L  
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK      A+ +L   EK  ++  + +   L+  L    + D A  ++ K+ ++  EP
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFFHKLLDK--EP 673

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           +V    V + G        +   L+S++ ER
Sbjct: 674 NV--NRVTLLGFMNKCYESNKYGLVSELSER 702



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 144/363 (39%), Gaps = 50/363 (13%)

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           ++     NG + +A  +  +M+  G  PS    N ++D     G +E A  +F +M + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P              D  S + MV   C  G + +A + L  + E G + D  T   +
Sbjct: 220 VSP--------------DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLI 265

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+ FC+ G +N  +  F ++   GL P+ + +  LINGL +    + AF +  +M + G 
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P+   + +L+   C++     AF L+L+ +R                            
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG------------------------- 360

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
                +K N   +  YT  + G C++ ++  A  + S + E   +    +   LI G CK
Sbjct: 361 -----YKPN---VHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            G    A ++     K GF       N ++  L   K      AY LL ++   G   D 
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL--CKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 743 CLY 745
             Y
Sbjct: 471 VTY 473


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 244/510 (47%), Gaps = 20/510 (3%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVVS  F  L+SG+ K+G  + A   F  M ++   PDVY YN +L+          AL 
Sbjct: 269 SVVS--FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
              +M      P+IVT+++L NG    G    A K++  M   G+ P+  TYTI+I G C
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           Q+   +E+++L  KM   G     V Y  LL+  CK  R+DEA+ LL   E  G  P L 
Sbjct: 387 QMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +YS LI GL +    +EA   Y +M  ++I P+  +   +I GL E G + +A      +
Sbjct: 447 TYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSV 506

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            +  +  +   YN +I G+  LG + +A     +I ++   P   TF  LI G C+ G +
Sbjct: 507 TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKL 566

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQ 453
            +A KL + ++  G  P+   +  L++G C+ G++     + ++ME     PT       
Sbjct: 567 AEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPT------- 619

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                  + +   +V+  C  G +H++ ++L  +   G  PD ITYN++I  FCK  ++ 
Sbjct: 620 -------QITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +L  ++    L+P  VTY  LINGL      +DA R+   +       +   Y +++
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732

Query: 574 TWSCRRRKFSLAFSLWLQYLR---DISGRD 600
              C +     A   + Q +    ++S RD
Sbjct: 733 KAHCAKGDVQNALVFFHQMVERGFEVSIRD 762



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 269/562 (47%), Gaps = 18/562 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++V+F+ L++G  K G  +VA      M + G+LP+ ++Y I++ GLC     +EA   
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M++ G  PD V YN L NGF  L  +  A  +++    +G  P L +Y+ LI G  +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               +E++    KM  + ++  +V Y V++  L ++G++ +A+ LL +M   G+ PD   
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI G C  G +++A  L  E+  +   PN+   + +I G+   G + +AQ  F+ + 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKAS 463
           K+     + ++N +IDG  K G + +A +  YK  +E G +PT+               +
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEA-VRSYKQIIEKGISPTI--------------VT 552

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             +++  +C  G + +A K+L  +   G +P  +TY +L+NG+C+ G+++    +  E++
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME 612

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            K ++P  +TY  ++ GL +  R  ++ ++   M   G  P    Y +++   C+     
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 584 LAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            AF L  Q L+        +    I      G +++A + L+ +  +        YT  +
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              C  G V+ AL  F  +VE    V+      +I+ LCKR  +  A   F   L +G  
Sbjct: 733 KAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIP 792

Query: 703 LRPRVCNYLLRSLLFSKDNKKV 724
               +C  +L +   S D   V
Sbjct: 793 PDQDICLVMLNAFHRSGDPNSV 814



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/628 (27%), Positives = 290/628 (46%), Gaps = 36/628 (5%)

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R ++   AL V  +M  LN   +I T++ L+  L     T++   + +E+   G+  N++
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRH---TDIMWDVYNEIKASGVPQNEY 236

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T  I+I GLC+ +R  +A     +       P  V++NAL++GFCK+  VD A +     
Sbjct: 237 TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMM 296

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            K G +P + SY+ L+ GL  A   +EA  +   M    +EPD+V Y ++  G    G +
Sbjct: 297 IKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLI 356

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A K++  M   G+ PD   Y  LI G C +G ++++  L+ ++  +    +  T+T+L
Sbjct: 357 SGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVL 416

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA------------ 432
           +  +C++G +D+A  L ++ME  G  P +  ++ LI GLCK G +E+A            
Sbjct: 417 LSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRI 476

Query: 433 -----------NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
                      + LF K  I +    F  +++  +   +      M++ Y   G I +A 
Sbjct: 477 YPNSFVCSAIISGLFEKGAISEAQMYFDSVTK-SDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +   Q+ E G  P I+T+NSLI GFCK G +  A+KL   +++ GL P SVTY TL+NG 
Sbjct: 536 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 595

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDISGRD 600
                    F +  +M      P+   Y  ++   C+  +   +  L    Y R +    
Sbjct: 596 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 655

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--YTIWLIGLCQDGQVKEALNIF 658
                 I+ F +  +++ A Q  L      +  Q +P  Y + + GLC  G +K+A  + 
Sbjct: 656 ITYNTVIQSFCKAHDLQKAFQ--LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             L +    +T  +   +I   C +G +  A+  F   ++ GF +  R  + ++  L   
Sbjct: 714 VTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL--C 771

Query: 719 KDNKKVHAYHLLCRMKSVGY--DLDACL 744
           K N    A    C M + G   D D CL
Sbjct: 772 KRNLITDAKFFFCMMLTHGIPPDQDICL 799



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 214/464 (46%), Gaps = 13/464 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G+ ++G+ E++ +   KM     +  +  Y  +L+   +      A+ + +EM 
Sbjct: 378 YTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEME 437

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +   P+++T+S+LI+GL K G  E AI++ +EM  + I PN F  + +ISGL +     
Sbjct: 438 VIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAIS 497

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA   F  +  S  + + + YN +++G+ KL  + EA+   +   + G  P + +++ LI
Sbjct: 498 EAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  +  +  EA      +    + P  V Y  ++ G  E G +     +L +M  + I 
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y  ++KG C  G L ++  L   ++ R   P+  T+  +I   C+   +  A +L
Sbjct: 618 PTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            N+M +    PS   +N LI+GLC  G L+ A+ L   ++        +RL+        
Sbjct: 678 HNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS-----IRLT-------- 724

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           K +  T+++ +C  G +  A     Q+ E G    I  Y+++IN  CK   I  A   F 
Sbjct: 725 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 784

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            +   G+ PD      ++N   R       F IF  M + G  P
Sbjct: 785 MMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 172/362 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K    +   +  +E+ S  +   S V   +ISG ++ G   +A   F  + +
Sbjct: 449 SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 508

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D   ++ +YN +++   +      A+  Y ++++    P IVTF+ LI G  K GK   
Sbjct: 509 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+LD +   G++P   TYT +++G C+       + +  +M+     P  + Y  ++ 
Sbjct: 569 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 628

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R+ E++ LL+     G  P   +Y+ +I    +A    +A+  + +M +  ++P
Sbjct: 629 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 688

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             V Y V+I GL   G +KDA +LL  ++++ I      Y  +IK  C  G +  A    
Sbjct: 689 SPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 748

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +R    +   ++ +I  +C+  ++ DA+  F  M   G  P   +   +++   ++
Sbjct: 749 HQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRS 808

Query: 427 GE 428
           G+
Sbjct: 809 GD 810



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 161/358 (44%), Gaps = 3/358 (0%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           +KR    SF   SA+IS L +           D +   +V+    ++ ++I GY K+G+ 
Sbjct: 473 SKRIYPNSFVC-SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSL 173
            +A+ S+ ++ E    P +  +N+++   F K+  L       + +K++ L P  VT++ 
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLI-YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 590

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+NG  + G       ML EM  + I P + TYT+V+ GLC+  R  E+ +L   M   G
Sbjct: 591 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 650

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD + YN ++  FCK   + +A  L     +    P   +Y+ LI+GL       +A 
Sbjct: 651 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDAD 710

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
                + ++ I    V Y  +I+     G V++A+     M ERG       Y+A+I   
Sbjct: 711 RLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 770

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           C   L+  A+     +      P+     +++    R+G  +   ++F  M K G  P
Sbjct: 771 CKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 56/388 (14%)

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V++ ++    S A  V DA+ +L+ M+   +      YN+L+    +L   D    +  E
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMWDVYNE 225

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I       N +T  ILI G+CR   + DA     +       PSV  FNAL+ G CK G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++ A   F  M + G  P ++              S   ++   C AG + +A +    +
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVY--------------SYNILLHGLCVAGSMEEALEFTNDM 331

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDI+TYN L NGF  +G I+GA K+ + + L GL PD VTY  LI G  ++   
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           E++F++  +M   G   S   Y  L++  C+                  SGR DE++  +
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCK------------------SGRIDEAVILL 433

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            E    G         L+ D       L  Y++ + GLC+ G V+EA+ ++  +  C   
Sbjct: 434 HEMEVIG---------LKPD-------LLTYSVLIHGLCKRGAVEEAIELYEEM--CSKR 475

Query: 668 VTPPS--CVKLIHGLCKRGYLDLAMDVF 693
           + P S  C  +I GL ++G +  A   F
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYF 503


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 249/533 (46%), Gaps = 22/533 (4%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M      P    +N +L    + + +    ++  +M      P++ T ++L
Sbjct: 49  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 108

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G+ P+  T+T +I GLC   +  +A  LF KM   G 
Sbjct: 109 INSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 168

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK+   + A+ LLRS E+    P +  Y+ +ID L + ++  EA+ 
Sbjct: 169 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 228

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM  + I PD+  Y  +I  L    + K    LL+ M    I+PD   ++ ++   C
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 288

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +   +  R   PN  T+  L+ G C    +D+A K+F+ M   G  P+V 
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348

Query: 415 MFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG----------------- 454
            +N LI+G CK   ++KA  LF +M   E+  N   +  L  G                 
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM 408

Query: 455 --GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
               ++ D A+ + +++  C    + +A  +L  +  S   PDI  Y  +I+G C+ G +
Sbjct: 409 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 468

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F  L  KGLRP+  TY  +INGL R    ++A ++F +M  NGC+P    Y ++
Sbjct: 469 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 528

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
                + ++   A  L  + L      D  +   + E L   +++ +++ +L 
Sbjct: 529 TQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 581



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 222/475 (46%), Gaps = 13/475 (2%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +     A     K+ +   QPD   +  ++     +     AL ++ +M+  
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+VT+  LINGL K G T  AI++L  M Q    P+   YT +I  LC+  +  EA
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEA 226

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF KM   G SPD   Y +L++  C L        LL        +P +  +S ++D 
Sbjct: 227 FNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA+     M    +EP+VV Y  ++ G     ++ +A+K+   M   G  P+
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G+C +  +D+A  L  E+ +++ +PNT T+  L+ G+C  G + DA  LF+
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P +  +  L+D LCK   L++A  L   +E             G N   D  
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE-------------GSNMDPDIQ 453

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               +++  C AG +  A  I   L+  G  P++ TY  +ING C+ G ++ A KLF E+
Sbjct: 454 IYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM 513

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
              G  PD  TY T+  GL +      A ++  +M   G +   +    L+   C
Sbjct: 514 DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 259/557 (46%), Gaps = 51/557 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+   + M      P+   +  +++ + +  +    + L  +M   G  PD    N L+N
Sbjct: 51  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 110

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC L R   A ++L    K G  P   +++ LI GL    +  +A   + KM  E  +P
Sbjct: 111 SFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 170

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +VV YG +I GL + G    A++LL  M +    PD   Y ++I   C    + +A +L 
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   P+  T+T LI  +C          L N+M  +   P V +F+ ++D LCK 
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 290

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++ +A+ +   M I G  P +               +   +++ +C    + +A K+  
Sbjct: 291 GKITEAHDVVDMMIIRGVEPNV--------------VTYNALMDGHCLQSEMDEAVKVFD 336

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +  +G  P++I+YN+LING+CK+  ++ A  LF+E+  K L P++VTY TL++GL  V 
Sbjct: 337 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVG 396

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M  +G  P  A Y+ L+ + C++     A +L    L+ I G +     
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL----LKTIEGSN----- 447

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                               MD    D Q+  YTI + G+C+ G+++ A +IFS L    
Sbjct: 448 --------------------MD---PDIQI--YTIVIDGMCRAGELEAARDIFSNLSSKG 482

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
                 +   +I+GLC+RG LD A  +F+    NG    P  C Y   +    ++ + + 
Sbjct: 483 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG--CSPDGCTYNTITQGLLQNKEALR 540

Query: 726 AYHLLCRMKSVGYDLDA 742
           A  LL  M + G+  D 
Sbjct: 541 AIQLLQEMLARGFSADV 557



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 203/422 (48%), Gaps = 13/422 (3%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            +I+ L K    +   + L  +  GN      V+  +I    K     +A   F KM   
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 236

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              PD++ Y ++++       +     +  +M+    +P++V FS +++ L K GK   A
Sbjct: 237 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
             ++D M  RG+ PN  TY  ++ G C  +  DEA ++F  M  +G +P+ ++YN L+NG
Sbjct: 297 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 356

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           +CK++R+D+A  L     +   +P   +Y+ L+ GL    R  +A A + +M      PD
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPD 416

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +  Y +++  L +   + +AM LL  +    + PD   Y  +I G C  G L+ AR +  
Sbjct: 417 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS 476

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN  T+TI+I G+CR G++D+A KLF +M+  GC P    +N +  GL +  
Sbjct: 477 NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNK 536

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           E  +A  L  +M           L++G +   D ++   +VE  C   L     +IL + 
Sbjct: 537 EALRAIQLLQEM-----------LARGFSA--DVSTTTLLVEMLCDDKLDQSVKQILSEF 583

Query: 488 AE 489
            +
Sbjct: 584 VQ 585



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 1/184 (0%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F       ++   A+   ++  L K +  D     L  +   N+     ++ ++
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I G  + G+ E A + F  +     +P+V  Y  ++N   R+ L   A  ++ EM    C
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P+  T++ +  GL ++ +   AI++L EM  RG   +  T T+++  LC  ++ D++ +
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQSVK 577

Query: 225 LFLK 228
             L 
Sbjct: 578 QILS 581


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 297/651 (45%), Gaps = 30/651 (4%)

Query: 44  PQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSG---NVSVVSD 99
           P +  +      +R R+R S  + +AV+S L +         +LD  RS     +     
Sbjct: 147 PHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTS-PQASLDAFRSIVALRLHPNHY 205

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+  +   G    AL +   M+ F   PD   YN +LN   RK +   A A+   M
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    P   T++ L++  ++ G  + A K+++ MT  G  P+ +TY ++ +GLCQ  + 
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325

Query: 220 DEAYRLFLKMKDSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           DEA+RL  +M+  G   PD V YN L +   K R   +AL LL    + G    L +++ 
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +I GL +    + A     KM ++ + PDV+ Y  +I    +AG +  A  L+ +M  RG
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  DT+  N ++   C     ++A+ L     +R  +P+  ++  ++    +    + A 
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL 505

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNR 457
           +L+++M +    PS+  +N LI GL + G L++A + L   ME G  P            
Sbjct: 506 RLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVP------------ 553

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   ++  YC  G +  A++   ++ E+   PD++T N+L+NG C  G ++ ALK
Sbjct: 554 --DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALK 611

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           LF+    KG + D +TY TLI  + +    + A   F  M   G  P    Y  +++   
Sbjct: 612 LFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALS 671

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL-----LEMDFKLND 632
              +   A ++ L  L + SG   +S  S    L+   V+ A  G       E      D
Sbjct: 672 EAGRTEEAQNM-LHKLAE-SGTLSQSFSS--PLLKPSSVDEAESGKDAKTEEETVENPQD 727

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                YT  + GLC  GQ KEA  I   +++    V   + + L+ GL KR
Sbjct: 728 SASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKR 778



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 266/614 (43%), Gaps = 59/614 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKT--EVA 187
           P   + +A L+   R +L  LA  + + + + +   P++   + +++ L++S  T  + +
Sbjct: 129 PSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQAS 188

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +     +    + PN +T+ +++   C      +A      M+  G SPD V YN LLN 
Sbjct: 189 LDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNA 248

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+   + EA ALL   +KDG  P   +Y+ L+    R     +A      M     EPD
Sbjct: 249 HCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPD 308

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  Y V+  GL +AGKV +A +L  +M   G ++PD   YN L            A  L 
Sbjct: 309 LWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLL 368

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++       T  I+I G+C++G ++ A    NKM   G  P V  +N LI   CKA
Sbjct: 369 EEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKA 428

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G + KA             TL   + + G ++ D  +L T++   C      +A  +L  
Sbjct: 429 GNIAKAY------------TLMDEMVRRGLKL-DTFTLNTVLYNLCKEKRYEEAQGLLQS 475

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
             + G +PD ++Y +++  + K  N   AL+L+ E+  K L P   TY TLI GL R+ R
Sbjct: 476 PPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            ++A     ++ + G  P    Y  ++   C+                            
Sbjct: 536 LKEAIDKLNELMEKGLVPDDTTYNIIIHAYCK---------------------------- 567

Query: 607 IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                 +G++ENA Q    ++E  FK +   +      + GLC +G++ +AL +F   VE
Sbjct: 568 ------EGDLENAFQFHNKMVENSFKPD---VVTCNTLMNGLCLNGKLDKALKLFESWVE 618

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
               V   +   LI  +CK G +D A+  F      G  L+P    Y +     S+  + 
Sbjct: 619 KGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARG--LQPDAFTYNVVLSALSEAGRT 676

Query: 724 VHAYHLLCRMKSVG 737
             A ++L ++   G
Sbjct: 677 EEAQNMLHKLAESG 690



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 247/559 (44%), Gaps = 29/559 (5%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDE 291
           G  P     +A L+ + +LR    A  LL S  +   V P L + + ++  L R+     
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 292 AYAW--YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
             +   +R +   ++ P+   + +++      G + DA+  LS M+  G+ PD   YN L
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +   C  G+L +AR+L   + K    P   T+  L+    R G +  A K+   M   G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IG-------------------KNPTLFL 449
            P +  +N L  GLC+AG++++A  L  +ME +G                   +  +  L
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 450 RLSQGGNRVHDKASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           RL +       KA+L T   +++  C  G +  A   L ++A+ G  PD+ITYN+LI+  
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK GNI  A  L  E+  +GL+ D+ T  T++  L +  R E+A  +    PQ G  P  
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLE 625
             Y ++M    +      A  LW + +         +  ++ + L + G ++ AI  L E
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           +  K        Y I +   C++G ++ A    + +VE        +C  L++GLC  G 
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           LD A+ +F   ++ G  +     N L++++   KD     A H    M++ G   DA  Y
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTM--CKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 746 PKTKSLLPGPWNTREMENM 764
               S L     T E +NM
Sbjct: 664 NVVLSALSEAGRTEEAQNM 682



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 10/295 (3%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K  N +   R +    ++K   S ++ + +I  L +          L+E
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L    +      + ++I  Y K GD E A +   KM E   +PDV   N ++N       
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL ++   V+     +++T++ LI  + K G  + A+    +M  RG+ P+ FTY +
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           V+S L +  R +EA  +  K+ +SG         +  +   K   VDEA +   +  ++ 
Sbjct: 666 VLSALSEAGRTEEAQNMLHKLAESG-----TLSQSFSSPLLKPSSVDEAESGKDAKTEEE 720

Query: 269 FV--PRLG---SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            V  P+     +Y+ L++GL  + ++ EA A   +M ++ +  D   Y  ++ GL
Sbjct: 721 TVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 174/679 (25%), Positives = 297/679 (43%), Gaps = 75/679 (11%)

Query: 117 ALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           AL  F  M +     P    YNAV+    R+     AL     MV+    P+  TF+ LI
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G  ++ + +VA  + D+M  RG   +  +Y  +I GLC+  R DEA  LF +M      
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----Q 251

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD   Y AL+ G C   R +E L +LR  ++ G+ P   +Y+ ++D   R ++  EA   
Sbjct: 252 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 311

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            ++MFE+ + P VV    +I    + G++ DA+++L  M+ RG  P+ + YNAL++GFC+
Sbjct: 312 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 371

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G + +A +L  ++      P+  T+ +LI G C +G ++ A +L   ME  G       
Sbjct: 372 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 431

Query: 416 FNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +NALI+ LCK G  ++A  LF  +E  G  P              +  +  +++   C +
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKP--------------NAVTFNSLINGLCKS 477

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G    A+K L ++  +G  PD  TY+S I   CK+      L    E+  K ++P +V Y
Sbjct: 478 GKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNY 537

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             +I+ L +        R +G+M  +GC P    Y + M   C   + + A ++ ++  +
Sbjct: 538 TIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK 597

Query: 595 D-----------------ISGRDDESMKSIEEFLQKGEVENA------IQGLLEMDFKLN 631
           +                   G+ D ++  +++      V N       ++ L+ M    +
Sbjct: 598 NGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVED 657

Query: 632 DFQLAPYTIW------------------------------LIGLCQDGQVKEALNIFSVL 661
              L P  +W                              L G  +DG+ +EA ++ S++
Sbjct: 658 VLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLM 717

Query: 662 VECKAIVTPPSCVKLIHGLCK-RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
            E    +       L+   CK + YLD A  +    +++GFI +     +LL  L+    
Sbjct: 718 KEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQ 776

Query: 721 NKKVHAYHLLCRMKSVGYD 739
             K     +  R K    D
Sbjct: 777 TDKAKEIFMNSRWKDYSPD 795



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 228/525 (43%), Gaps = 19/525 (3%)

Query: 145 RKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           R  L  LAL ++  M +     P   T++ +I  L +      A++ L  M + G  P+ 
Sbjct: 129 RFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDA 188

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           +T+  +I G C+ N+ D A  LF KM   G + D V+Y  L+ G C+  R+DEA+ L   
Sbjct: 189 YTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGE 248

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            ++    P +  Y+ L+ GL  A+R +E     R+M E    P    Y  ++       K
Sbjct: 249 MDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERK 304

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            K+A ++L +M E+G+ P      A+I  +C  G +  A  +   +  R   PN  T+  
Sbjct: 305 AKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNA 364

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G C  G V  A  L NKM   G  P    +N LI G C  G +E A  L        
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL-------- 416

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                LRL +G   + D+ +   ++   C  G   +A  +   L   G  P+ +T+NSLI
Sbjct: 417 -----LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 471

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG CK G  + A K  +++   G  PD+ TY + I  L ++   ++     G+M Q    
Sbjct: 472 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVK 531

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQG 622
           PS   Y  ++    + R + L    W + +      D  +   S+  +  +G +  A   
Sbjct: 532 PSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENV 591

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           L+EM           Y   + G    GQ   A++I   +    ++
Sbjct: 592 LMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV 636



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 282/639 (44%), Gaps = 52/639 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY +    + A + F KM       DV  Y  ++           A+ ++ EM
Sbjct: 190 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 249

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++  ++ L+ GL  + + E  + ML  M + G  P+   Y  V+   C+  +A
Sbjct: 250 DQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 305

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +  +M + G +P  V   A++N +CK  R+ +AL +L   +  G  P + +Y+ L
Sbjct: 306 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 365

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G     +  +A     KM    + PD V Y ++IRG    G ++ A +LL  M   G+
Sbjct: 366 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 425

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           + D Y YNALI   C  G  DQA SL   +  R   PN  TF  LI G+C++G  D A K
Sbjct: 426 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 485

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA----------GELEKAN---------LLFYKME 440
              KM  AGC P    +++ I+ LCK           GE+ + +         ++ +K+ 
Sbjct: 486 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 545

Query: 441 IGKNPTLFLR-----LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +N  L  R     +S G N   D  +  T +  YC  G +++A  +LM+++++G   D
Sbjct: 546 KERNYGLVARTWGEMVSSGCN--PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 603

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE------- 548
            + YN+L++G   +G  + A+ + K++      P+  TY  L+  L R+   E       
Sbjct: 604 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 663

Query: 549 ----------DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-IS 597
                     D F +F  M +N   P+   Y S++       +   A SL      D IS
Sbjct: 664 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 723

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
             +D     +  F +     +A   +  M       QL  Y   L GL  +GQ  +A  I
Sbjct: 724 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783

Query: 658 FSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFL 694
           F  +       +P   V   +I GL K+G+ D++ ++ +
Sbjct: 784 F--MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 820



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 225/497 (45%), Gaps = 44/497 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+   G   KA+    KM+     PD   YN ++    R Q     +   + +
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI----RGQCIDGHIESAFRL 416

Query: 160 VKL----NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           ++L      + +  T++ LIN L K G+T+ A  + D +  RGI PN  T+  +I+GLC+
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             +AD A++   KM  +GC+PD   Y++ +   CK++   E L+ +    +    P   +
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ +I  L + + Y      + +M      PDVV Y   +R     G++ +A  +L +M 
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 596

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G+  DT  YN L+ G   +G  D A S+  ++    S+PN  T+ IL+  + R  +V+
Sbjct: 597 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 656

Query: 396 DAQKL-----------------FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           D   L                 F+ M+K    P+ G ++++++G  + G  E+A  L   
Sbjct: 657 DVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSL 716

Query: 439 ME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M+   I  N  ++  L                V  +C +     A+ ++  + + G +P 
Sbjct: 717 MKEDSISLNEDIYTAL----------------VTCFCKSKRYLDAWVLVCSMIQHGFIPQ 760

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +++Y  L++G    G  + A ++F   + K   PD + +  +I+GL +    + +  +  
Sbjct: 761 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 820

Query: 556 QMPQNGCTPSPAVYKSL 572
            + +  C PS   Y  L
Sbjct: 821 MLERMNCRPSHQTYAML 837



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 231/526 (43%), Gaps = 56/526 (10%)

Query: 206 YTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           +  +++ L +   A  A RLF  M + +  +P    YNA++   C+   +  AL  L   
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            + G+ P   +++ LI G  R  + D A   + KM       DVV Y  +I GL EAG++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDL-----GLL-------------------- 359
            +A++L  +M +    PD + Y AL+KG C+      GLL                    
Sbjct: 240 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 360 ----------DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
                      +A  +  E++++   P   T T +I   C+ G + DA ++   M+  GC
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P+V  +NAL+ G C  G++ KA  L  KM   G NP              D  +   ++
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP--------------DAVTYNLLI 401

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G I  A+++L  +   G + D  TYN+LIN  CK G  + A  LF  L+ +G++
Sbjct: 402 RGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 461

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P++VT+ +LINGL +  + + A++   +M   GCTP    Y S +   C+ +      S 
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 521

Query: 589 WLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
             + L +D+          I + L++       +   EM     +  +  YT  +   C 
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCI 581

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           +G++ EA N+   + +    V   +   L+ G    G  D A+ + 
Sbjct: 582 EGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 180/404 (44%), Gaps = 54/404 (13%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+++R+  V+  +  + +LI G    G  E A      M+      D Y YNA++N   +
Sbjct: 382 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A +++  +      PN VTF+ LINGL KSGK ++A K L++M   G  P+ +T
Sbjct: 442 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 501

Query: 206 YTIVISGLCQINRADEAY-----------------------------------RLFLKMK 230
           Y+  I  LC++  + E                                     R + +M 
Sbjct: 502 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 561

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
            SGC+PD V Y   +  +C   R++EA  +L    K+G      +Y+ L+DG     + D
Sbjct: 562 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 621

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIR-----------------GLSEAGKVKDAMKLLSD 333
            A +  ++M      P+   Y +++R                 G+ +A ++ D   L   
Sbjct: 622 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 681

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNG 392
           M++   +P++  Y+++++GF + G  ++A SL V + K DS+  N   +T L+   C++ 
Sbjct: 682 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSL-VSLMKEDSISLNEDIYTALVTCFCKSK 740

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              DA  L   M + G  P +  +  L+ GL   G+ +KA  +F
Sbjct: 741 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 784



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 172/391 (43%), Gaps = 17/391 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K    D      D L +  +   +  F  LI+G  K G  + A +   KM  
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD Y Y++ +    + +     L+   EM++ +  P+ V ++++I+ L K     +
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +   EM   G  P+  TYT  +   C   R +EA  + ++M  +G + D +AYN L++
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 612

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI-----------------DGLFRAKRY 289
           G   + + D A+++L+       VP   +Y  L+                  G+++A   
Sbjct: 613 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 672

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            + +  +  M + +  P+   Y  ++ G SE G+ ++A  L+S M+E  I  +   Y AL
Sbjct: 673 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 732

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  FC       A  L   + +   +P   ++  L+ G+   G  D A+++F        
Sbjct: 733 VTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY 792

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            P   ++  +IDGL K G  + +  +   +E
Sbjct: 793 SPDEIVWKVIIDGLIKKGHSDISREMIIMLE 823



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 169/374 (45%), Gaps = 17/374 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+ L K    D+ W+ L+++ S   +  +  +   I    K+   ++ L   G+M +
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 527

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +P    Y  V++   +++ + L    + EMV   C P++VT++  +      G+   
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L EM++ G+  +   Y  ++ G   I + D A  +  +M      P+   Y  LL 
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647

Query: 247 GFCKLRRVDEALALLRS-----------------FEKDGFVPRLGSYSCLIDGLFRAKRY 289
              ++R V++ L L  +                  +K+ F+P  G+YS +++G     R 
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +EA +    M E+ I  +  +Y  ++    ++ +  DA  L+  M + G +P    Y  L
Sbjct: 708 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 767

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G    G  D+A+ + +    +D  P+   + ++I G+ + G  D ++++   +E+  C
Sbjct: 768 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 827

Query: 410 FPSVGMFNALIDGL 423
            PS   +  L + L
Sbjct: 828 RPSHQTYAMLTEEL 841



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 136/331 (41%), Gaps = 34/331 (10%)

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           LF  + +         +   ++   C    + +A + L  +  SG  PD  T+NSLI G+
Sbjct: 139 LFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGY 198

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN------ 560
           C+   ++ A  LF ++ L+G   D V+Y TLI GL    R ++A  +FG+M Q       
Sbjct: 199 CRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYA 258

Query: 561 -------------------------GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLR 594
                                    G  PS   Y +++ + CR RK   A  +  + + +
Sbjct: 259 ALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEK 318

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            ++         I  + ++G + +A++ L  M  +     +  Y   + G C +G+V +A
Sbjct: 319 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 378

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
           + + + +  C       +   LI G C  G+++ A  +      +G I      N L+ +
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L   KD +   A  L   +++ G   +A  +
Sbjct: 439 L--CKDGRTDQACSLFDSLETRGIKPNAVTF 467



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 17/333 (5%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  Q G  F     ++    S  + + VI  LLK   + L  +T  E+ S   +    
Sbjct: 511 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 570

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +   +  Y   G   +A     +M +     D   YN +++          A+++  +M
Sbjct: 571 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 630

Query: 160 VKLNCLPNIVTFSLLIN-----------------GLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +PN  T+ +L+                  G+ K+ +      + D M +   LPN
Sbjct: 631 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 690

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY+ ++ G  +  R +EA  L   MK+   S +   Y AL+  FCK +R  +A  L+ 
Sbjct: 691 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 750

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           S  + GF+P+L SY  L+ GL    + D+A   +     +   PD +++ V+I GL + G
Sbjct: 751 SMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 810

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
               + +++  +      P    Y  L +   D
Sbjct: 811 HSDISREMIIMLERMNCRPSHQTYAMLTEELPD 843


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 258/526 (49%), Gaps = 25/526 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  ++    K+     A+  F +M+    +PD++  N ++N          +  V  +++
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   PN +T + L+ GL   G+ + ++   D++  +G   ++ +Y  +++GLC+I    
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A +L   ++D    P+ V YN +++G CK + V+EA  L    +  G  P + +YS LI
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G   A +  EA+    +M  + I P+V  Y +++  L + GKVK+A  LL+ M + G+ 
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YN L+ G+C +G +  A+ +   + ++   PN +++ I+I  +C++  VD+A  L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             ++      P+   +++LIDG CK G +  A  L  +M     P              D
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPA-------------D 359

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  ++++  C    + KA  + M++ E G  P+  TY +LI+G CK G    A KLF+
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQ 419

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            L +KG R +  TY  +I+GL +    ++A  +  +M +NGC P    ++ ++     + 
Sbjct: 420 HLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479

Query: 581 KFSLAFSLWLQYL-------RDISG-----RDDESMKSIEEFLQKG 614
           +   A  L  + +       RD  G      +D++ K + E + KG
Sbjct: 480 QNDKAEKLLHEMIAKDLLRFRDFHGERSPNENDKAEKLLHEMIAKG 525



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 241/499 (48%), Gaps = 49/499 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P I+ F+ ++  L K      AI +  +M  +GI P+ FT  I+I+  C + +   ++ +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             K+   G  P+ +  N L+ G C    V ++L         GF     SY+ L++GL +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                 A    R + +    P+VV+Y  +I GL +   V +A  L S+M  RGI P+   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI GFC  G L +A  L  E+  ++  PN +T+TIL+  +C+ G V +A+ L   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           K G  P+V  +N L+DG C  GE++ A  +F+ M + G NP ++              S 
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVY--------------SY 293

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             M+++ C +  + +A  +L ++     +P+ +TY+SLI+GFCK+G I  AL L KE+  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G   D VTY +L++ L +    + A  +F +M + G  P+   Y +L+   C+      
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK------ 407

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                        GR   + K  +  L KG              ++N   +  Y + + G
Sbjct: 408 ------------GGRHKNAQKLFQHLLVKG-------------CRIN---VWTYNVMISG 439

Query: 645 LCQDGQVKEALNIFSVLVE 663
           LC++G + EAL + S + E
Sbjct: 440 LCKEGMLDEALAMKSKMEE 458



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 231/458 (50%), Gaps = 13/458 (2%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  +N ++    + + +  A++++ +M      P++ T ++LIN     G+   +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L ++ + G  PN  T   ++ GLC      ++     K+   G   D V+Y  LLNG CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           +     AL LLR  E     P +  Y+ +IDGL + K  +EAY  Y +M    I P+V+ 
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G   AG++ +A  LL++M  + I P+ Y Y  L+   C  G + +A++L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K    PN  ++  L+ G C  G V +A+++F+ M + G  P+V  +N +ID LCK+  ++
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A  L             LR     N V +  +  ++++ +C  G I  A  +L ++   
Sbjct: 308 EAMNL-------------LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   D++TY SL++  CK  N++ A  LF +++ +G++P+  TY  LI+GL +  R ++A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNA 414

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            ++F  +   GC  +   Y  +++  C+      A ++
Sbjct: 415 QKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 235/521 (45%), Gaps = 50/521 (9%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P    +  ++  L ++     A  LF +M+  G  PD    N L+N FC L ++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    K G+ P   + + L+ GL       ++  ++ K+  +  + D V Y  ++ GL +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ + A+KLL  + +R   P+   YN +I G C   L+++A  L  E+  R   PN  T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           ++ LI G C  G + +A  L N+M      P+V  +  L+D LCK G++++A NLL    
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G  P +               S  T+++ YC  G +  A ++   + + G  P++ +Y
Sbjct: 248 KEGVKPNV--------------VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +I+  CK   ++ A+ L +E+  K + P++VTY +LI+G  ++ R   A  +  +M  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G       Y SL+   C+ +    A +L+              MK  E  +Q  +    
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALF--------------MKMKERGIQPNKY--- 396

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
                             YT  + GLC+ G+ K A  +F  L+     +   +   +I G
Sbjct: 397 -----------------TYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG 439

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           LCK G LD A+ +     +NG I        ++RS LF KD
Sbjct: 440 LCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS-LFEKD 479



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 149/297 (50%), Gaps = 14/297 (4%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN---- 141
           L+E+   N++     + +L+    K G  ++A      M +   +P+V  YN +++    
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267

Query: 142 ---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
              +   KQ+F       + MV+    PN+ +++++I+ L KS + + A+ +L E+  + 
Sbjct: 268 IGEVQNAKQMF-------HTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN 320

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           ++PN  TY+ +I G C++ R   A  L  +M   G   D V Y +LL+  CK + +D+A 
Sbjct: 321 MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKAT 380

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           AL    ++ G  P   +Y+ LIDGL +  R+  A   ++ +  +    +V  Y VMI GL
Sbjct: 381 ALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGL 440

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            + G + +A+ + S M E G +PD   +  +I+   +    D+A  L  E+  +D L
Sbjct: 441 CKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 98/200 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I  L K    D     L E+   N+   +  +  LI G+ K+G    AL+   +M
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                  DV  Y ++L+   + Q    A A++ +M +    PN  T++ LI+GL K G+ 
Sbjct: 352 YHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRH 411

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A K+   +  +G   N +TY ++ISGLC+    DEA  +  KM+++GC PD V +  +
Sbjct: 412 KNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEII 471

Query: 245 LNGFCKLRRVDEALALLRSF 264
           +    +  + D+A  LL   
Sbjct: 472 IRSLFEKDQNDKAEKLLHEM 491


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 247/487 (50%), Gaps = 20/487 (4%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           +V    ++ LI    K    ++A+     MK     P   ++N V+    R      AL 
Sbjct: 77  AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALG 136

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY +M   +  P+ +T++ L++GLSK+G+   A+++L EM     +P+  T T+V+  LC
Sbjct: 137 VYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC 195

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA-LLRSFEKDGFVPRL 273
             +R D+A  L  +M   G + + + Y+AL++G CK  R+DEA+A LL    + GF P +
Sbjct: 196 LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +YS +IDGL +A R  +A   + +M      P  + Y  +I G   AG + +A++LL  
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGK 312

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M +    PD   Y  L+  FC +G LD A  L  ++      P+  TFT L+ G+C  G 
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           ++DA +L  ++ + GC P++  +N ++DG CK+ ++ KA  L                S+
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR-----------SR 421

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL-AESGNLP-DIITYNSLINGFCKVGN 511
           G   V +  +   +V   C AG   +A + L QL +E G  P  +  Y  +++  C+ G 
Sbjct: 422 G--FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 479

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A++ ++E+  +G  P + T+ T++  L +  + + A  +  +M + G TP P    +
Sbjct: 480 TDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDA 539

Query: 572 LMTWSCR 578
           +++  CR
Sbjct: 540 VVSAYCR 546



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 268/550 (48%), Gaps = 23/550 (4%)

Query: 170 TFSLLINGLSKSGK-TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           TF++++ GL  S K   +   +LDE+  RG+ P+      +++ LC       A  LF K
Sbjct: 12  TFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDK 71

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M + G       YN L++  CK R +DEA+ LL   +  G  P    ++ +I GL RA R
Sbjct: 72  MAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGR 130

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
              A   YR+M +    PD + Y  ++ GLS+AG+++DA+++L +M     VPD      
Sbjct: 131 LRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTV 189

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF-NKMEKA 407
           +++  C    +D AR L  E+  R    N  T++ L+ G+C+   +D+A  L   ++ + 
Sbjct: 190 VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRR 249

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P +  ++ +IDGLCKAG L  A  +F +M     PT                +  ++
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA--PTAI--------------TYNSL 293

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  YC AG + +A ++L ++ +    PD+ITY +L++ FCK+G ++ A +LF+++    L
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD VT+ +L++GL    R EDA  +  ++ + GC P+   Y  ++   C+  +   A  
Sbjct: 354 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEE 413

Query: 588 LWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN--DFQLAPYTIWLIG 644
           L   +  R            +    + G  + A+Q L +++ +       +A Y I L  
Sbjct: 414 LVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDA 473

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           LC+DG+  +A+  +  +++   +    +   ++  LCK      A ++    +K G    
Sbjct: 474 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 533

Query: 705 PRVCNYLLRS 714
           P  C+ ++ +
Sbjct: 534 PGTCDAVVSA 543



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 270/586 (46%), Gaps = 63/586 (10%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++++    PD    N +L      +    A+A++ +M +L  + N  T+  LI+ L K+ 
Sbjct: 36  EIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKAR 94

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             + A+ +L +M  RG+ P    + +VI GLC+  R   A  ++ +M D+   PDF+ Y 
Sbjct: 95  LLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYT 153

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++G  K  R+ +A+ +L+       VP   + + ++  L    R D+A     +M   
Sbjct: 154 KLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 213

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMK-LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            +  + + Y  ++ GL +  ++ +A+  LL ++  RG  PD   Y+ +I G C  G L  
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273

Query: 362 ARSLQVEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           A    V+I++  S  P   T+  LI G CR G +D+A +L  KM    C P V  +  L+
Sbjct: 274 A----VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLM 329

Query: 421 DGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
              CK G L+ A  LF +M   K +P              D  +  ++V+  C  G +  
Sbjct: 330 SAFCKMGRLDDAYELFQQMVANKLSP--------------DVVTFTSLVDGLCGEGRMED 375

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A ++L ++   G  P I TYN +++G+CK   +  A +L  + + +G  P++VTY  L+ 
Sbjct: 376 ALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVA 435

Query: 540 GLQRVDREEDAFRIFGQMPQNG--CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           G  R  R + A +   Q+   G  C  S A+Y  ++   CR                   
Sbjct: 436 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCR------------------D 477

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           GR D++++  EE +Q+G V  A                A +   +  LC+  Q ++A  +
Sbjct: 478 GRTDDAVQFYEEMIQRGYVPAA----------------ATFATVVFALCKAHQPQQAHEL 521

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYL----DLAMDVFLYTLKN 699
              +++      P +C  ++   C+ G +    +LA ++ LYT K+
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLYTDKS 567



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 216/424 (50%), Gaps = 19/424 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G  K G    A++   +M      PD      V+           A  +  EM+   
Sbjct: 155 LVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG 214

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKML-DEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              N +T+S L++GL K  + + A+ +L  E+T+RG  P+  TY+ VI GLC+  R  +A
Sbjct: 215 MAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 274

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F +M    C+P  + YN+L+ G+C+   +DEA+ LL     D   P + +Y+ L+  
Sbjct: 275 VDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSA 331

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +  R D+AY  +++M   K+ PDVV +  ++ GL   G+++DA++LL ++  RG  P 
Sbjct: 332 FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPT 391

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y YN ++ G+C    + +A  L  +   R  +PNT T+ IL+ G CR G  D A +  +
Sbjct: 392 IYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD 451

Query: 403 KMEKAG--CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           ++   G  C  SV M+  ++D LC+ G  + A + FY+  I +              V  
Sbjct: 452 QLNSEGGPCPTSVAMYAIILDALCRDGRTDDA-VQFYEEMIQR------------GYVPA 498

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
            A+  T+V   C A    +A+++L ++ + G+ P   T +++++ +C+ G I  A +L  
Sbjct: 499 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELAS 558

Query: 521 ELQL 524
           EL+L
Sbjct: 559 ELRL 562



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 107/236 (45%), Gaps = 5/236 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++S   K    D  ++   ++ +  +S     F  L+ G    G  E ALE   ++  
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P +Y YN V++   +      A  +  +      +PN VT+++L+ G  ++G+T+ 
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445

Query: 187 AIKMLDEM-TQRGILPNKFT-YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           A++ LD++ ++ G  P     Y I++  LC+  R D+A + + +M   G  P    +  +
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA---KRYDEAYAWYR 297
           +   CK  +  +A  LL    K G  P  G+   ++    RA   ++ DE  +  R
Sbjct: 506 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 252/545 (46%), Gaps = 14/545 (2%)

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           S Y      + AL SF +M      P +  +  +L    + + +   L++  +M      
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
            N+ T ++LIN      +   A  +L ++ + G  P+  ++T +I GLC   +  EA  L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM   G  PD V Y  L+NG CK      A+ LLRS EK    P +  Y  LI  L +
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            ++  +A+  + +M  + I P++V    ++  L   G+ K    LL++M +  I+P+   
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
              ++   C  G++ QA  +   +++    P+  T+T LI G C    +D+A K+F+ M 
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             GC P+V  +N LI+G CK   ++KA  LF +M   K              + +  +  
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK-------------LIPNTVTYN 393

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++   C  G +  A  +  ++   G +PD++TY  L++  CK  +++ A+ L K ++  
Sbjct: 394 TLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGS 453

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            L PD   Y  +I+G+ R    EDA  +F  +   G  P+   Y  +    C+R     A
Sbjct: 454 NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEA 513

Query: 586 FSLWLQYLRDISGRDDESMKSIEE-FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L+++   +    D  +  +I + FL+  E   AIQ L EM  +     ++  T+ +  
Sbjct: 514 TKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGM 573

Query: 645 LCQDG 649
           L  DG
Sbjct: 574 LSDDG 578



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 221/494 (44%), Gaps = 15/494 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +++   KV      L    KM  F    +VY  N ++N          A +V  +++
Sbjct: 77  FAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKIL 136

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL C P+  +F+ LI GL   G+   A+ + D+M   G  P+   Y  +I+GLC+     
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A RL   M+   C PD V Y  L++  CK R+  +A  L       G  P + + + L+
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L     +        +M + KI P+ +    ++  L + G V  A  ++  M + G+ 
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y ALI G C    +D+A  +   +  +   PN  ++  LI G C+   +D A  L
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F +M +    P+   +N LI GLC  G L+ A  LF +M   G+ P              
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIP-------------- 422

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  + + +++  C    + KA  +L  +  S   PDI  Y  +I+G C+ G +  A  LF
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             L  KGL+P+  TY  + +GL +    ++A ++F +M +N C+     Y ++     R 
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542

Query: 580 RKFSLAFSLWLQYL 593
            + S A  L  + L
Sbjct: 543 NETSRAIQLLEEML 556



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 254/569 (44%), Gaps = 55/569 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+   + M      P+   +  +++ + ++ R      L  KM   G   +    N L+N
Sbjct: 58  ALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLIN 117

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC L RV+ A ++L    K G  P   S++ LI GL    +  EA   + KM  E  +P
Sbjct: 118 SFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQP 177

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV+Y  +I GL + G    A++LL  M +    PD   Y  LI   C      QA +L 
Sbjct: 178 DVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLF 237

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +   PN  T   L+  +C  G       L N+M  +   P+      ++D LCK 
Sbjct: 238 SEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKE 297

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G + +A+ +   M + G  P              D  +   +++ +C    + +A K+  
Sbjct: 298 GMVAQAHDVVDMMFQSGVEP--------------DVVTYTALIDGHCLRSEMDEAVKVFD 343

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G  P++ +YN+LING+CK+  ++ A+ LF+E+  + L P++VTY TLI+GL  V 
Sbjct: 344 MMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVG 403

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M   G  P    Y+ L+ + C+      A +L    L+ I G +     
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL----LKAIEGSN----- 454

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                             L+ D ++       YTI + G+C+ G++++A ++FS L    
Sbjct: 455 ------------------LDPDIQI-------YTIVIDGMCRAGELEDARDLFSNLSSKG 489

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
                 +   + HGLCKRG LD A  +F+   +N        C Y   +  F ++N+   
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA--CSADGCTYNTITQGFLRNNETSR 547

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           A  LL  M + G+  D      T +LL G
Sbjct: 548 AIQLLEEMLARGFSCDV----STTTLLVG 572



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 219/462 (47%), Gaps = 51/462 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI+G  K G    A+     M++ +CQPDV +Y  +++   + +    A  ++ EM
Sbjct: 181 IYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEM 240

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PNIVT + L+  L   G+ +    +L+EM    I+PN  + T V+  LC+    
Sbjct: 241 ITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMV 300

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+ +   M  SG  PD V Y AL++G C    +DEA+ +       G  P + SY+ L
Sbjct: 301 AQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTL 360

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  + +R D+A   + +M  +K+ P+ V Y  +I GL   G+++DA+ L  +M   G 
Sbjct: 361 INGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQ 420

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD   Y  L+   C    LD+A +L   I   +  P+   +TI+I GMCR G ++DA+ 
Sbjct: 421 IPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARD 480

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF+ +   G  P+V  +N +  GLCK G L++A  LF +M+                   
Sbjct: 481 LFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMD------------------- 521

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                    E  C+A                    D  TYN++  GF +    + A++L 
Sbjct: 522 ---------ENACSA--------------------DGCTYNTITQGFLRNNETSRAIQLL 552

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVD--REEDAFRIFGQMPQ 559
           +E+  +G   D V+  TL+ G+   D   + +A ++    P 
Sbjct: 553 EEMLARGFSCD-VSTTTLLVGMLSDDGLDQSEAHKLEDMFPH 593



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/385 (22%), Positives = 158/385 (41%), Gaps = 51/385 (13%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N     +     LD A S    +      P+   F  ++  + +         L  KM+
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
             G   +V   N LI+  C    +  A ++L   +++G  P              D AS 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQP--------------DTASF 147

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T+++  C  G I +A  +  ++   G  PD++ Y +LING CK G+ + A++L + ++ 
Sbjct: 148 TTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK 207

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
              +PD V YGTLI+ L +  ++  AF +F +M   G +P+     SL+   C   ++  
Sbjct: 208 GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKH 267

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLI 643
             +L  + +      +  S+ ++ + L K  +      +++M F+   +  +  YT  + 
Sbjct: 268 VNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALID 327

Query: 644 GLCQDGQVKEALNIFSVLVE---------------------------------CKAIVTP 670
           G C   ++ EA+ +F ++V                                  C+  + P
Sbjct: 328 GHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIP 387

Query: 671 PSCV--KLIHGLCKRGYLDLAMDVF 693
            +     LIHGLC  G L  A+ +F
Sbjct: 388 NTVTYNTLIHGLCHVGRLQDAIALF 412



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 67/141 (47%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L K    D     L  +   N+     ++ ++I G  + G+ E A + F  +     +P+
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           V+ YN + +   ++ L   A  ++ EM +  C  +  T++ +  G  ++ +T  AI++L+
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553

Query: 193 EMTQRGILPNKFTYTIVISGL 213
           EM  RG   +  T T+++  L
Sbjct: 554 EMLARGFSCDVSTTTLLVGML 574


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/624 (25%), Positives = 288/624 (46%), Gaps = 45/624 (7%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFR-------FFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           LP L++ T     +K K+    F+       FF +  + +   +    + VI + ++ N 
Sbjct: 62  LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK---ALESFGKMKEFDCQPDVYI 135
            D+      ++    + +    F +LI  +    DC K   +L +FGK+ +   QPDV  
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCF---CDCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 136 YNAVLN-IAFRKQL--------------FLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           +N +L+ +    ++              FL A+A++ +MV++   P ++TF+ LINGL  
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  ++++M  +G+  +  TY  +++G+C++     A  L  KM+++   PD V 
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+A+++  CK     +A  L     + G  P + +Y+C+IDG     R+ +A    R M 
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E +I PDV+ +  +I    + GK+ +A KL  +M  R I PDT  YN++I GFC     D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A+ +    +   + P+  TF  +I   CR   VD+  +L  ++ + G   +   +N LI
Sbjct: 419 DAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            G C+   L  A  LF +M           +S G     D  +   ++  +C    + +A
Sbjct: 475 HGFCEVDNLNAAQDLFQEM-----------ISHG--VCPDTITCNILLYGFCENEKLEEA 521

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            ++   +  S    D + YN +I+G CK   ++ A  LF  L + G+ PD  TY  +I+G
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
                   DA  +F +M  NG  P  + Y +L+    +  +   +  L  +   +    D
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641

Query: 601 DESMKSIEEFLQKGEVENAIQGLL 624
             ++K  EE + +   E  I+  L
Sbjct: 642 AFTIKMAEEIICRVSDEEIIENYL 665



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 257/568 (45%), Gaps = 56/568 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI   D M +            VI    ++NR D A  L+ KM+      +  ++N L+ 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC   ++  +L+      K GF P + +++ L+ GL    R  EA A            
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA------------ 197

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
              L+G M+    E G + +A+ L   M E G+ P    +N LI G C  G + +A +L 
Sbjct: 198 ---LFGYMV----ETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +    +  T+  ++ GMC+ G    A  L +KME+    P V +++A+ID LCK 
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G    A  LF +M E G  P +F              +   M++ +C+ G    A ++L 
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVF--------------TYNCMIDGFCSFGRWSDAQRLLR 355

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E    PD++T+N+LI+   K G +  A KL  E+  + + PD+VTY ++I G  + +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F  M     +P    + +++   CR ++        +Q LR+IS R   +  
Sbjct: 416 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG----MQLLREISRRGLVANT 467

Query: 606 SIEEFLQKGEVE----NAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVKEALNI 657
           +    L  G  E    NA Q L +   ++    + P TI     L G C++ +++EAL +
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F V+   K  +   +   +IHG+CK   +D A D+F     +G  + P V  Y +    F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG--VEPDVQTYNVMISGF 582

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              +    A  L  +MK  G++ D   Y
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTY 610


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 242/506 (47%), Gaps = 59/506 (11%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E   K L+ M  RG +P+    T +I G C+I +  +A  +   ++ SG  PD
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + YN L++G+CK   +D AL +L   ++    P + +Y+ ++  L  + +  +A     
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVL---DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  +++  PDV+ Y ++I    +   V  AMKLL +MR +G  PD   YN LI G C  G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A      +      PN  T  I++  MC  G   DA+KL + M + GC PSV  FN
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--------------FLRLSQGG 455
            LI+ LC+ G L +A  +  KM         +  NP L              +L +    
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  T++   C  G +  A +IL QL+  G  P +ITYN++I+G  KVG    A
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +KL  E++ KGL+PD +TY +L++GL R  + ++A + F  +   G  P+   Y S+M  
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+ R+   A   +L Y+  IS R     K  E                           
Sbjct: 484 LCKSRQTDRAID-FLAYM--ISKR----CKPTE--------------------------- 509

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVL 661
           A YTI + G+  +G  KEAL++ + L
Sbjct: 510 ATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 222/459 (48%), Gaps = 18/459 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ ++G  +KA      +++    PDV  YN +++   +      AL V   + ++N
Sbjct: 98  LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMN 154

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ ++  L  SGK + A+++LD   Q+   P+  TYTI+I   C+ +   +A 
Sbjct: 155 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M++ G  PD V YN L+NG CK  R+DEA+  L +    G  P + +++ ++  +
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R+ +A      M  +   P VV + ++I  L   G +  A+ +L  M   G  P++
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ GFC    +D+A      +  R   P+  T+  L+  +C++G VD A ++ N+
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           +   GC P +  +N +IDGL K G+ E+A  L  +M   G  P              D  
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP--------------DII 440

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++V      G + +A K    L   G  P+ ITYNS++ G CK    + A+     +
Sbjct: 441 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 500

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
             K  +P   TY  LI G+      ++A  +  ++   G
Sbjct: 501 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I    K +G     + LDE+R+         + VLI+G  K G  ++A++    M  
Sbjct: 198 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 257

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + CQP+V  +N +L        ++ A  +  +M++  C P++VTF++LIN L + G    
Sbjct: 258 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 317

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +L++M   G  PN  +Y  ++ G C+  + D A      M   GC PD V YN LL 
Sbjct: 318 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 377

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  +VD A+ +L      G  P L +Y+ +IDGL +  + + A     +M  + ++P
Sbjct: 378 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 437

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++ Y  ++ GLS  GKV +A+K   D+   GI P+   YN+++ G C     D+A    
Sbjct: 438 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +  +   P   T+TILI G+   G+  +A  L N++   G
Sbjct: 498 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 205/426 (48%), Gaps = 18/426 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS   K    D   Q LD +   NV+     +  ++      G  ++A+E   +  +
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +C PDV  Y  ++    ++     A+ +  EM      P++VT+++LING+ K G+ + 
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AIK L+ M   G  PN  T+ I++  +C   R  +A +L   M   GCSP  V +N L+N
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+   +  A+ +L      G  P   SY+ L+ G  + K+ D A  +   M      P
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  ++  L + GKV  A+++L+ +  +G  P    YN +I G   +G  ++A  L 
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++   P+  T++ L+ G+ R G VD+A K F+ +E  G  P+   +N+++ GLCK+
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            + ++A + L Y +     PT              +A+   ++E     GL  +A  +L 
Sbjct: 488 RQTDRAIDFLAYMISKRCKPT--------------EATYTILIEGIAYEGLAKEALDLLN 533

Query: 486 QLAESG 491
           +L   G
Sbjct: 534 ELCSRG 539



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 216/454 (47%), Gaps = 32/454 (7%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L   G+++D  K L  M  RG +PD     +LI+GFC +G   +A  +   + +  +
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
           +P+  T+ +LI G C++G +D+A ++ ++M  A   P V  +N ++  LC +G+L++A  
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 180

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +L  +++    P              D  +   ++E  C    + +A K+L ++   G+ 
Sbjct: 181 VLDRQLQKECYP--------------DVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 226

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TYN LING CK G ++ A+K    +   G +P+ +T+  ++  +    R  DA ++
Sbjct: 227 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 286

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEF 610
              M + GC+PS   +  L+ + CR+     A  +  +    + G    S+     +  F
Sbjct: 287 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM--PMHGCTPNSLSYNPLLHGF 344

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIV 668
            ++ +++ AI+ L  M  +     +  Y   L  LC+DG+V  A+ I + L    C  ++
Sbjct: 345 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 404

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              + V  I GL K G  + A+ +     + G  L+P +  Y       S++ K   A  
Sbjct: 405 ITYNTV--IDGLSKVGKTERAIKLLDEMRRKG--LKPDIITYSSLVSGLSREGKVDEAIK 460

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
               ++ +G   +A  Y    S++ G   +R+ +
Sbjct: 461 FFHDLEGLGIRPNAITY---NSIMLGLCKSRQTD 491



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 145/266 (54%), Gaps = 3/266 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   + G   +A++   KM    C P+   YN +L+   +
Sbjct: 289 DMLRKGCSPSVVT--FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCK 346

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ L+  L K GK +VA+++L++++ +G  P   T
Sbjct: 347 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLIT 406

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL ++ + + A +L  +M+  G  PD + Y++L++G  +  +VDEA+      E
Sbjct: 407 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 466

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P   +Y+ ++ GL ++++ D A  +   M  ++ +P    Y ++I G++  G  K
Sbjct: 467 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 526

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIK 351
           +A+ LL+++  RG+V  +      +K
Sbjct: 527 EALDLLNELCSRGLVKKSSAEQVAVK 552


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 230/454 (50%), Gaps = 15/454 (3%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           ++++ L+  L+KSG+ +      ++M   G +PN +TY  ++  LCQ  R +EA  +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   GCSP+  +Y+ L+ G C+ ++VDEA  LL      G  P + +Y  L+ GL +  +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA   + +M      PD V+Y V+I G S+ G + +A +L  +M E+G +P  + YN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ GF   G   + +SL  ++ ++  +PN  TF  L+ G C+ G + +A +LF +M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           C P V  +N LI G+C  G+  +A  L  +M   G  P              D  S   +
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP--------------DIVSYNIL 303

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ Y  +G +  A K+  ++ +SG  PD  +Y+++I+  C+ G +  A  +FK++   G 
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD+     L+ GL R +R  ++  +F  M +  C P    Y  LM   C+ ++      
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           ++ +        D E  K I E L++ + ++A +
Sbjct: 424 IFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 218/441 (49%), Gaps = 13/441 (2%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G C+    ++  M    C P+ Y Y  +L    + Q F  A +V+  M    C PN+ 
Sbjct: 29  KSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           ++S+LI GL +  K + A ++L+EM   G  PN  TY  ++SGLC++ +  EA  LF +M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GC PD V YN L++GF K   + EA  L     + G +P + +Y+ L+ G  R   +
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
               + ++ M  +   P++  +  ++ G  + G + +A +L  +MR  G  PD   YN L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I+G C  G   +A+ L  E+ +    P+  ++ ILI G  ++G +D A KLF ++ K+G 
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P    ++ +ID LC+AG++  A ++F  M           ++ G     D A +  +V 
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDM-----------IANGS--APDAAVVIPLVI 375

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C    + ++ ++   + +   +P I  YN L+   CK    +   ++F EL  +G  P
Sbjct: 376 GLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSP 435

Query: 530 DSVTYGTLINGLQRVDREEDA 550
           D      ++  L+R D ++ A
Sbjct: 436 DVEISKVILETLRRSDDKDAA 456



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 224/483 (46%), Gaps = 49/483 (10%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           ++YN LL    K  R D            G VP   +Y  L+  L +A+R++EA + +R 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   P+V  Y ++I GL    KV +A +LL++M + G  P+   Y +L+ G C +G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L +A  L   +  R   P+   + +LI G  + G + +A +LF +M + GC P+V  +N+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           L+ G  + GE  +   LF  M   G  P +F              +   +++ +C  G +
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF--------------TFNNLLDGFCKMGDM 243

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A+++ +++   G  PD+++YN+LI G C  G  + A +L +E+   G+ PD V+Y  L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+G  +    + A ++F ++P++G  P    Y +++   CR  K   AF ++        
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF-------- 355

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                     ++ +  G   +A                A     +IGLC+  ++ E+  +
Sbjct: 356 ----------KDMIANGSAPDA----------------AVVIPLVIGLCRGERLTESCEL 389

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F  +V+ + +   P    L++ LCK    D   ++F    + GF     +   +L +L  
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449

Query: 718 SKD 720
           S D
Sbjct: 450 SDD 452



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 189/368 (51%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+ L +    D   + L+E+  G        +  L+SG  K+G  ++A++ F +M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               C PD  +YN +++   +K     A  ++ EM++  C+P + T++ L++G S+ G+ 
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                +  +M ++G +PN FT+  ++ G C++    EA+RLFL+M+  GC PD V+YN L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C   +  EA  LLR   + G  P + SY+ LIDG  ++   D A   + ++ +  +
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EPD   Y  +I  L  AGKV  A  +  DM   G  PD      L+ G C    L ++  
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   + K + +P    + +L+  +C+    DD  ++F+++ + G  P V +   +++ L 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 425 KAGELEKA 432
           ++ + + A
Sbjct: 449 RSDDKDAA 456



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 148/299 (49%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+ VLI G+ K GD  +A   F +M E  C P V+ YN++L+   RK  F    +++ +M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++  C+PNI TF+ L++G  K G    A ++  EM   G  P+  +Y  +I G+C   + 
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA RL  +M  SG  PD V+YN L++G+ K   +D A+ L     K G  P   SYS +
Sbjct: 279 HEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTI 338

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L RA +   A+  ++ M      PD  +   ++ GL    ++ ++ +L   M +   
Sbjct: 339 IDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           VP    YN L+   C     D    +  E+ +R   P+     +++  + R+   D A+
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 172/392 (43%), Gaps = 49/392 (12%)

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT---------------------- 380
           T  YN L++     G  D       ++     +PNT+T                      
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 381 -------------FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                        ++ILI G+CR   VD+A +L N+M   G  P+V  + +L+ GLCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +L++A  LF +M     P              D      +++ +   G + +AY++  ++
Sbjct: 137 KLKEAVDLFSRMVYRGCPP-------------DGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G +P + TYNSL++GF + G       LFK++  +G  P+  T+  L++G  ++   
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
            +A R+F +M   GC P    Y +L+   C + K   A  L  + +R   G D  S    
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           I+ + + G +++AI+   E+     +     Y+  +  LC+ G+V  A  +F  ++   +
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
                  + L+ GLC+   L  + ++F   +K
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVK 395


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 299/628 (47%), Gaps = 29/628 (4%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M    C PDV+ Y  VL      +    A  +   M +    CLPN V ++ +I+G  K
Sbjct: 169 RMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFK 228

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G    A  + +EM QRGI P+  TY  V++ LC+    D+A  +  +M D G  PD   
Sbjct: 229 EGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWT 288

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN+L+ G+    +  EA+ + +     G +P + + + L+  L +  +  +A   +  M 
Sbjct: 289 YNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMA 348

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  + D+  Y +M+ G +  G + D  +L + M   GI PD++ +N LIK +   G+LD
Sbjct: 349 MKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLD 408

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A  +  E+ ++   P+  T++ +I  +CR G +DDA + FN+M   G  PS+  ++ LI
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLI 468

Query: 421 DGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            G C  G+L KA +L+   M  G  P              D      ++   C  G +  
Sbjct: 469 QGFCTHGDLLKAKDLVLQMMNKGMRP--------------DIGCFNFIINNLCKLGRVMD 514

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  I       G  P+++ YN+L++G+C VG +  AL++F  +   G++P+ V YGTL+N
Sbjct: 515 AQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVN 574

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  +V R ++   +F ++   G  PS  +Y  ++    +  +   A   + +        
Sbjct: 575 GYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAM 634

Query: 600 DDESMKSIEEFLQKGEVENA----IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
           D  +   +   L K    +      + L  M+ K++   +    I + G+ Q  +V+EA 
Sbjct: 635 DRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKID---ITTLNIMIAGMFQIRRVEEAK 691

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP--RVCNYLLR 713
           ++F+ +     + +  +   ++  L K G ++ A D+F  +++N    +P  ++ N+++R
Sbjct: 692 DLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMF-SSMENAGCEQPNSQLLNHVVR 750

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            LL  ++  +   Y  L ++    + LD
Sbjct: 751 ELLEKREIVRAGTY--LSKIDERSFSLD 776



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 172/648 (26%), Positives = 302/648 (46%), Gaps = 33/648 (5%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            P ++ Y  +++   R     L LA + +++K     + +  S L+ GL ++ +T  A+ 
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164

Query: 190 -MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSPDFVAYNALLN 246
            +L  M   G +P+ F+Y IV+  LC   ++ +A  L   M + G  C P+ VAYN +++
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF K   V++A  L     + G  P L +Y+C+++ L +A+  D+A A  R+M ++ + P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D   Y  +I G S  G+ K+A+++   M  +GI+PD    N+L+   C  G +  AR + 
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVF 344

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +    +  ++ I++ G    G + D  +LFN M   G  P   +FN LI    K 
Sbjct: 345 DSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKC 404

Query: 427 GELEKANLLFYKM-EIGKNP------TLFLRLSQGG---------NRVHDKA---SLQT- 466
           G L++A ++F +M E G  P      T+   L + G         N++ D+    S+ T 
Sbjct: 405 GMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTY 464

Query: 467 --MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++ +CT G + KA  +++Q+   G  PDI  +N +IN  CK+G +  A  +F     
Sbjct: 465 HFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTIS 524

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            GL P+ + Y TL++G   V + E+A R+F  M   G  P+  VY +L+   C+  +   
Sbjct: 525 IGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDE 584

Query: 585 AFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
             SL+ + L + I          +    Q G    A     EM           Y+I L 
Sbjct: 585 GLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLG 644

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GL ++    EA+ +F  L      +   +   +I G+ +   ++ A D+F    ++G + 
Sbjct: 645 GLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLV- 703

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
            P V  Y +      K+     A  +   M++ G     C  P ++ L
Sbjct: 704 -PSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG-----CEQPNSQLL 745



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 242/510 (47%), Gaps = 50/510 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G++K GD  KA + F +M +    PD+  YN V+N   + +    A A+  +MV
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               LP+  T++ LI G S +G+ + A+++  +MT +GILP+  T   +++ LC+  +  
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +F  M   G   D  +Y  +LNG+     + +   L      DG  P    ++ LI
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +    D A   + +M E+ +EPDVV Y  +I  L   GK+ DA++  + M ++G+ 
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P    Y+ LI+GFC  G L +A+ L +++  +   P+   F  +I  +C+ G V DAQ +
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNI 518

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+     G  P+V ++N L+DG C  G++E A  +F  M   G  P + +          
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVV---------- 568

Query: 460 DKASLQTMVEQYCTAG-----------LIHKA-------YKILM---------------- 485
                 T+V  YC  G           ++HK        Y I++                
Sbjct: 569 ----YGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKF 624

Query: 486 -QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ ESG   D  TY+ ++ G  K    + A+ LFKEL    ++ D  T   +I G+ ++
Sbjct: 625 HEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQI 684

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            R E+A  +F  + ++G  PS   Y  +MT
Sbjct: 685 RRVEEAKDLFASISRSGLVPSVVTYSIMMT 714



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 235/530 (44%), Gaps = 29/530 (5%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R       F ++  +G   D +  + LL G C+ +R  E
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGV 313
           AL  LL      G VP + SY  ++  L   ++  +A    R M E      P+ V Y  
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNT 221

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L ++M +RGI PD   YN ++   C    +D+A ++  ++  + 
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LP+  T+  LI G    G   +A ++  KM   G  P V   N+L+  LCK G+++ A 
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +F  M +    T             D  S + M+  Y T G +    ++   +   G  
Sbjct: 342 DVFDSMAMKGQKT-------------DIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIA 388

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD   +N LI  + K G ++ A  +F E++ +G+ PD VTY T+I  L R+ + +DA   
Sbjct: 389 PDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEK 448

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F QM   G  PS + Y  L+   C       A  L LQ +      D      I   L K
Sbjct: 449 FNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK 508

Query: 614 -GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            G V +A Q +   DF ++   L P    Y   + G C  G+++ AL +F V+V   A +
Sbjct: 509 LGRVMDA-QNIF--DFTIS-IGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS--AGI 562

Query: 669 TPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            P   V   L++G CK G +D  + +F   L  G      + N +L  L 
Sbjct: 563 QPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 176/350 (50%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           S  ++  S +F VLI  Y K G  ++A   F +M+E   +PDV  Y+ V+    R     
Sbjct: 384 SDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD 443

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A+  + +M+     P+I T+  LI G    G    A  ++ +M  +G+ P+   +  +I
Sbjct: 444 DAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFII 503

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           + LC++ R  +A  +F      G  P+ + YN L++G+C + +++ AL +       G  
Sbjct: 504 NNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQ 563

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P +  Y  L++G  +  R DE  + +R++  + I+P   LY +++ GL +AG+   A   
Sbjct: 564 PNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVK 623

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M E GI  D Y Y+ ++ G       D+A  L  E+   +   +  T  I+I GM +
Sbjct: 624 FHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQ 683

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
              V++A+ LF  + ++G  PSV  ++ ++  L K G +E+A+ +F  ME
Sbjct: 684 IRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 5/383 (1%)

Query: 63  FASNSAVISMLLKPNG----FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            A +S + ++L+K        D      +E+R   V      +  +I+   ++G  + A+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           E F +M +    P +  Y+ ++         L A  +  +M+     P+I  F+ +IN L
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K G+   A  + D     G+ PN   Y  ++ G C + + + A R+F  M  +G  P+ 
Sbjct: 507 CKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNV 566

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y  L+NG+CK+ R+DE L+L R     G  P    Y+ ++ GLF+A R   A   + +
Sbjct: 567 VVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHE 626

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M E  I  D   Y +++ GL +     +A+ L  ++    +  D    N +I G   +  
Sbjct: 627 MTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRR 686

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC-FPSVGMFN 417
           +++A+ L   I +   +P+  T++I++  + + G+V++A  +F+ ME AGC  P+  + N
Sbjct: 687 VEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLN 746

Query: 418 ALIDGLCKAGELEKANLLFYKME 440
            ++  L +  E+ +A     K++
Sbjct: 747 HVVRELLEKREIVRAGTYLSKID 769



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 54/347 (15%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSA---VISMLLKPN--------- 77
           +K  V  ++ K   P +G   FI     K  R   + +     IS+ L PN         
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539

Query: 78  GFDLYWQTLDELRSGNVSVVSD------VFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           G+ L  +  + LR  +V V +       V+  L++GY KVG  ++ L  F ++     +P
Sbjct: 540 GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP 599

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
              +YN +L                                   +GL ++G+T  A    
Sbjct: 600 STTLYNIIL-----------------------------------HGLFQAGRTVPAKVKF 624

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            EMT+ GI  +++TY+IV+ GL + + +DEA  LF ++       D    N ++ G  ++
Sbjct: 625 HEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQI 684

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE-PDVVL 310
           RRV+EA  L  S  + G VP + +YS ++  L +    +EA   +  M     E P+  L
Sbjct: 685 RRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQL 744

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
              ++R L E  ++  A   LS + ER    D      LI  F   G
Sbjct: 745 LNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKG 791


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 244/503 (48%), Gaps = 67/503 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I    K+G  ++A+++F +M   +C PDV+ Y+ ++N   +++    A+ +  EM
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               CLPN VTF++LI+ LSK+G    A K++D M  +G +PN+ TY  +I GLC   + 
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 319

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L  KM  S C P+ V Y  ++NG  K RR ++ + +L S E+ G       YS L
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 379

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GLF+  + + A   +++M E+  +P+VV+YG  I GL    K  +A  +L +M  +G 
Sbjct: 380 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 439

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+ + Y++L+KGF   G   +A  +  E+  +D   N    ++L+ G+C +G + +A  
Sbjct: 440 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 499

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           ++  M   G  P V  ++++I GLC  G ++K   LFY+                     
Sbjct: 500 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE--------------------- 538

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                    MQ  E  + PD++TYN L N  C+  N+  A+ L 
Sbjct: 539 -------------------------MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 573

Query: 520 KELQLKGLRPDSVTYGTLINGL-QRVDREED--------------------AFRIFGQMP 558
             +  +G  PDS+T    +  L +R++  +D                    A RI  +M 
Sbjct: 574 NSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEML 633

Query: 559 QNGCTPSPAVYKSLMTWSCRRRK 581
                P P+ +  ++  +C+ ++
Sbjct: 634 LRFLPPEPSTWSRVIQRTCKPKR 656



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 226/524 (43%), Gaps = 83/524 (15%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYN 137
           F    Q LD ++     +   +F ++     K     +A+  F +M  +  C+  V  +N
Sbjct: 105 FHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFN 164

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           +VLN+  ++  F  A   Y  +   N                                 +
Sbjct: 165 SVLNVIIQEGDFSYAFKFYLHVFGAN--------------------------------SK 192

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  PN  TY ++I  LC++ + D A   F +M    C+PD   Y+ L+NG CK RRVDEA
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 258 LALLRSFEKD-----------------------------------GFVPRLGSYSCLIDG 282
           + LL   + +                                   G VP   +Y+ LI G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L    + D+A +   KM   K  P+ V YG +I GL +  + +D + +L  M ERG   +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y Y++LI G    G  + A  L  E+ ++   PN   +   I G+CR+   D+A+ +  
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P+   +++L+ G  K G+ +KA L++ +M           +SQ  +  H+  
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM-----------MSQ--DMRHNVV 479

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++   C +G + +A  +   +   G  PD++ Y+S+I G C VG+++  LKLF E+
Sbjct: 480 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539

Query: 523 QLK--GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           Q +    RPD VTY  L N L R D    A  +   M   GC P
Sbjct: 540 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 187/359 (52%), Gaps = 2/359 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +++ L K    D     LDE+++         F VLI    K GD  +A +    M  
Sbjct: 237 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 296

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   YN +++    K     AL++  +MV   C+PN VT+  +INGL K  + E 
Sbjct: 297 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 356

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            + +L  M +RG   N++ Y+ +ISGL +  +++ A RL+ +M + GC P+ V Y A ++
Sbjct: 357 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFID 416

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  + DEA  +L+     GF+P   +YS L+ G F+     +A   +++M  + +  
Sbjct: 417 GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 476

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL- 365
           +VV   V++ GL E+G++++A+ + + M   G+ PD   Y+++IKG CD+G +D+   L 
Sbjct: 477 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 536

Query: 366 -QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +++  +  S P+  T+ IL   +CR   +  A  L N M   GC P     N  ++ L
Sbjct: 537 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 239/552 (43%), Gaps = 51/552 (9%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF  LI   + S +     ++LD M + G +  +  + ++     + +   EA   F +
Sbjct: 90  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 149

Query: 229 M-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           M  D  C     ++N++LN                       + + G +S      +  K
Sbjct: 150 MANDLHCKQTVKSFNSVLN----------------------VIIQEGDFS------YAFK 181

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            Y   +    K F+    P+++ Y ++I+ L + G++  A+    +M  +   PD + Y+
Sbjct: 182 FYLHVFGANSKGFQ----PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYS 237

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            L+ G C    +D+A  L  E+     LPN  TF +LI  + +NG +  A KL + M   
Sbjct: 238 TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLK 297

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           GC P+   +N LI GLC  G+L+KA  L  KM   K            N+V     +  +
Sbjct: 298 GCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP---------NQVTYGTIINGL 348

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V+Q      +H    ILM + E G   +   Y+SLI+G  K G    A++L+KE+  KG 
Sbjct: 349 VKQRRAEDGVH----ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P+ V YG  I+GL R ++ ++A  I  +M   G  P+   Y SLM    ++     A  
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 464

Query: 588 LWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           +W + + +D+          +    + G +  A+     M  +     +  Y+  + GLC
Sbjct: 465 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 524

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
             G V + L +F  + +C+   + P  V    L + LC++  L  A+D+    L  G   
Sbjct: 525 DVGSVDKGLKLFYEM-QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 583

Query: 704 RPRVCNYLLRSL 715
               CN  L +L
Sbjct: 584 DSLTCNIFLETL 595



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 88/444 (19%)

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +G  P+   YN +IK  C LG +D+A     E+  ++  P+  T++ L+ G+C+   VD+
Sbjct: 192 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 251

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  L ++M+  GC P+   FN LID L K                               
Sbjct: 252 AVFLLDEMQAEGCLPNPVTFNVLIDALSKN------------------------------ 281

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                             G + +A K++  +   G +P+ +TYN+LI+G C  G ++ AL
Sbjct: 282 ------------------GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L +++      P+ VTYGT+INGL +  R ED   I   M + G   +  +Y SL++  
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383

Query: 577 CRRRKFSLAFSLWLQ------------YLRDISG--RD---DESMKSIEEFLQKGEVENA 619
            +  K   A  LW +            Y   I G  RD   DE+   ++E L KG + NA
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 620 I--QGLLEMDFKLNDFQLAPYTIW------------------LIGLCQDGQVKEALNIFS 659
                L++  FK  D Q A   +W                  L GLC+ G+++EAL +++
Sbjct: 444 FTYSSLMKGFFKKGDSQKA-ILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT 502

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY-LLRSLLFS 718
            ++         +   +I GLC  G +D  + +F          RP V  Y +L + L  
Sbjct: 503 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCR 562

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDA 742
           +DN    A  LL  M   G D D+
Sbjct: 563 QDN-LTRAIDLLNSMLDEGCDPDS 585



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 39/307 (12%)

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL---AESGNLPDIIT 498
           G+    F R++   +      S  +++      G    A+K  + +      G  P+++T
Sbjct: 141 GEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLT 200

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN +I   CK+G I+ A+  F+E+ LK   PD  TY TL+NGL +  R ++A  +  +M 
Sbjct: 201 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             GC P+P  +  L+    +    S A  L                  ++    KG V N
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKL------------------VDNMFLKGCVPN 302

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            +                 Y   + GLC  G++ +AL++   +V  K +    +   +I+
Sbjct: 303 EVT----------------YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIIN 346

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           GL K+   +  + + +   + G      + + L+  L   K+ K  +A  L   M   G 
Sbjct: 347 GLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF--KEGKSENAVRLWKEMAEKGC 404

Query: 739 DLDACLY 745
             +  +Y
Sbjct: 405 KPNVVVY 411


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 248/551 (45%), Gaps = 47/551 (8%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L K   F++    +DE+              L+ G  + G    A +   ++K+    P 
Sbjct: 306 LCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPS 365

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           +++YNA++N   +   F  A  ++ EM +     N VT+S+LI+   + GK + AI  L 
Sbjct: 366 LFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLG 425

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           +M   GI    + Y  +I+G C++     A   F +M D G  P  V+Y +L++G+C   
Sbjct: 426 KMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKG 485

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           ++ EA  L       G  P   +++ LI  LFRA R  +A+  + +M E+ + P+ V Y 
Sbjct: 486 KLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYN 545

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           VMI G  + G    A +LL+ M ++G+VPDTY Y  LI   C  G + +A+    ++ + 
Sbjct: 546 VMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
               N   ++ L+ G C+ G + DA  +  +M K G    +  +  LIDG  K  +    
Sbjct: 606 HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAV 665

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             L   M   +     LR         DK    +M++ Y  AG + KA+ I   + + G 
Sbjct: 666 FGLLKNMHDQR-----LR--------PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC 712

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKEL------------------------------ 522
            P+I+TY +LIN  CK G ++ A  L+KE+                              
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ 772

Query: 523 ----QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
                LKGL  ++V+Y  L+ G  ++ R E+A ++  +M  N   P    Y +++   CR
Sbjct: 773 LHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 579 RRKFSLAFSLW 589
           R     A   W
Sbjct: 833 RGNLDGAIEFW 843



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 308/668 (46%), Gaps = 34/668 (5%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V++ L K    D+      E+ S  +     ++  +I  + ++ +  KA E   +M+  D
Sbjct: 199 VLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD 258

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
              +V +YN +++   + +    A+ +   +++     + VT+  L+ GL K  + EV  
Sbjct: 259 L--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGA 316

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            ++DEM + G +P +   + ++ GL +  +  +A+ L  ++K  G  P    YNAL+N  
Sbjct: 317 GVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSL 376

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  + DEA  L +   + G      +YS LID   R  + D A  +  KM    I+  V
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  +I G  + G +  A+    +M ++G+ P    Y +LI G+C+ G L +A  L  E
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   PNT+TFT LI  + R   + DA +LF++M +    P+   +N +I+G CK G 
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556

Query: 429 LEKANLLFYKM-EIGKNPTLFL------------RLSQGGNRVHD---------KASLQT 466
             KA  L  +M + G  P  +             R+ +    + D         +     
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++  YC  G +  A  +  ++ + G   D++ Y  LI+G  K  + +    L K +  + 
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           LRPD V Y ++I+G  +    + AF I+  M   GCTP+   Y +L+   C+      A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
            LW + L   S  +  +    ++   ++G +E A+Q   +M  K        Y I + G 
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGF 795

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           C+ G+V+EA  +   +++  AI   P C+    +I+  C+RG LD A++ +   L  G  
Sbjct: 796 CKLGRVEEATKLLDEMID-NAIF--PDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG-- 850

Query: 703 LRPRVCNY 710
           L+P    Y
Sbjct: 851 LKPDTLAY 858



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 266/580 (45%), Gaps = 63/580 (10%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ++ ++  M +   +P + T   ++NGL+K  + ++ + +  E+   GI P+ + Y  VI 
Sbjct: 177 SVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIR 236

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C++    +A  +  +M+ S    + V YN L++G CK +RV EA+ +     + G   
Sbjct: 237 SFCELKNFAKAKEMIQRMESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTA 294

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y  L+ GL + + ++       +M E    P       ++ GL   GKV DA  L+
Sbjct: 295 SEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLV 354

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + +++ G +P  + YNALI   C  G  D+A  L  E+ ++    N  T++ILI   CR 
Sbjct: 355 NRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRR 414

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +D A     KM  AG   +V  +N+LI+G CK G L  A   F +M + G  PT+   
Sbjct: 415 GKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTV--- 471

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       S  +++  YC  G +H+A+++  ++   G  P+  T+ +LI+   +  
Sbjct: 472 -----------VSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRAN 520

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A +LF E+  + + P+ VTY  +I G  +      AF +  QM Q G  P    Y+
Sbjct: 521 RMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYR 580

Query: 571 SLMTWSC---------------RRRKFSL---AFSLWLQ-YLRDISGRDDESMKSIEEFL 611
            L++  C                R  F L    +S  L  Y ++  GR  +++    E +
Sbjct: 581 PLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKE--GRLRDALGVCREMV 638

Query: 612 QKG------------------EVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDG 649
           ++G                  +  +A+ GLL+    ++D +L P    YT  + G  + G
Sbjct: 639 KRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLK---NMHDQRLRPDKVIYTSMIDGYSKAG 695

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            VK+A  I+ ++++        +   LI+ LCK G +D A
Sbjct: 696 SVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA 735



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 245/554 (44%), Gaps = 86/554 (15%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I    +    D     L ++    + +    +  LI+G+ K+G+   A+  F +M +
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P V  Y ++++    K     A  +Y+EM      PN  TF+ LI+ L ++ +   
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF-------- 238
           A ++ DEM ++ ++PN+ TY ++I G C+     +A+ L  +M   G  PD         
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584

Query: 239 ---------------------------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                      + Y+ALL+G+CK  R+ +AL + R   K G   
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L  Y+ LIDG  + +     +   + M ++++ PD V+Y  MI G S+AG VK A  + 
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIW 704

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M + G  P+   Y  LI   C  GL+D+A  L  E+   +S PN  T+   +  + R 
Sbjct: 705 DIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLARE 764

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G ++ A +L N M K G   +   +N L+ G CK G +E+A                   
Sbjct: 765 GSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEAT------------------ 805

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                                         K+L ++ ++   PD ITY+++I   C+ GN
Sbjct: 806 ------------------------------KLLDEMIDNAIFPDCITYSTIIYQCCRRGN 835

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++GA++ +  +  KGL+PD++ Y  LI G         AF +   M + G  P+ A +KS
Sbjct: 836 LDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKS 895

Query: 572 LMTWSCRRRKFSLA 585
           L   +   RKFS++
Sbjct: 896 LSHGA--SRKFSIS 907



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/501 (24%), Positives = 231/501 (46%), Gaps = 50/501 (9%)

Query: 237 DFVA---YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           DF++   ++ L+  + + +R+ +++ + R   +   +P++ +   +++GL + +R D   
Sbjct: 154 DFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVL 213

Query: 294 AWYRKMFEEKIEPDVVLY---------------------------------GVMIRGLSE 320
             + ++    I PD+ +Y                                  V+I GL +
Sbjct: 214 VLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCK 273

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
             +V +A+++ + + ++G+      Y  L+ G C +   +    +  E+ +   +P    
Sbjct: 274 NKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAA 333

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            + L+ G+ R G V DA  L N+++K G  PS+ ++NALI+ LCK G+ ++A LLF +M 
Sbjct: 334 LSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM- 392

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                       + G   +D  +   +++ +C  G +  A   L ++  +G    +  YN
Sbjct: 393 -----------GEKGLCAND-VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYN 440

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           SLING CK+GN++ A+  F E+  KGL+P  V+Y +LI+G     +  +AFR++ +M   
Sbjct: 441 SLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK 500

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENA 619
           G  P+   + +L++   R  + + AF L+ + L +++   +      IE   ++G    A
Sbjct: 501 GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA 560

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            + L +M  K        Y   +  LC  G+V EA      L      +       L+HG
Sbjct: 561 FELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHG 620

Query: 680 LCKRGYLDLAMDVFLYTLKNG 700
            CK G L  A+ V    +K G
Sbjct: 621 YCKEGRLRDALGVCREMVKRG 641



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 215/468 (45%), Gaps = 35/468 (7%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL G    R V EAL  L  FEK  F+  LG +  LI    + KR  ++   +R M + +
Sbjct: 132 LLRGGLDPREVFEAL--LDCFEKCDFISSLG-FDLLIQSYVQEKRMFDSVLIFRLMRQCE 188

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + P V   G ++ GL++  +V   + L  ++   GI PD Y Y A+I+ FC+L    +A+
Sbjct: 189 LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAK 248

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +   +   D   N   + +LI G+C+N  V +A ++ N + + G   S   +  L+ GL
Sbjct: 249 EMIQRMESSD--LNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGL 306

Query: 424 CKAGELE-KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK  E E  A ++   +E+G  PT              +A+L ++VE     G +  A+ 
Sbjct: 307 CKVQEFEVGAGVMDEMIELGFVPT--------------EAALSSLVEGLRRKGKVVDAFD 352

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           ++ ++ + G +P +  YN+LIN  CK G  + A  LFKE+  KGL  + VTY  LI+   
Sbjct: 353 LVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFC 412

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           R  + + A    G+M   G   +   Y SL+   C+    S A S + + +       D+
Sbjct: 413 RRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI-------DK 465

Query: 603 SMKS--------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            +K         I  +  KG++  A +   EM  K        +T  +  L +  ++ +A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             +F  ++E   +    +   +I G CK G    A ++    ++ G +
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLV 573



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/259 (20%), Positives = 111/259 (42%), Gaps = 38/259 (14%)

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           + ++ L+   E  +    + ++ LI  + +   +  ++ +F+ ++   L P   T G ++
Sbjct: 141 EVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVL 200

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           NGL ++ R +    +FG++   G  P   +Y +++   C  + F+ A             
Sbjct: 201 NGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA------------- 247

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                    +E +Q+ E               +D  +  Y + + GLC++ +V EA+ I 
Sbjct: 248 ---------KEMIQRMES--------------SDLNVVVYNVLIHGLCKNKRVWEAVEIK 284

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           + L++     +  +   L+ GLCK    ++   V    ++ GF+      + L+  L   
Sbjct: 285 NGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL--R 342

Query: 719 KDNKKVHAYHLLCRMKSVG 737
           +  K V A+ L+ R+K VG
Sbjct: 343 RKGKVVDAFDLVNRVKKVG 361


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 259/539 (48%), Gaps = 30/539 (5%)

Query: 17  PIEPALEPLLPFLSKTTVTSVIM-KTKNPQVGF------RFFIWA-AKRKRLRSFASNSA 68
           P  P   P L   S +  TS++  +  NP  GF      +  + A A+   L+S+     
Sbjct: 10  PRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHLQSYDFRET 69

Query: 69  VISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFG 122
            +  LL    K   F+     L+ L   N     DV     LI G++   + EKA     
Sbjct: 70  HLMKLLNRSCKAGKFNESLYFLECLV--NKGYTPDVILCTKLIKGFFNFKNIEKASRVM- 126

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++ E   +PDV+ YNAV++   +      A  V   M     LP+IVT++++I  L    
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K  +A+K+LD++     +P   TYTI+I         +EA +L  +M   G  PD   YN
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           A++ G CK   V+ A  L+ S    G  P + SY+ L+       ++DE      +MF  
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             EP+ V Y ++I  L   G++ +A+ +L  M E+ + PDTY Y+ LI   C  G LD A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +     LP+   +  ++  +C+NG  + A ++FNK+   GC P+V  +N +I  
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           L   G+  +A        +G  P +   +S+G +   D+ +  +++   C  GL+ +A  
Sbjct: 427 LWSCGDRSRA--------LGMVPAM---ISKGVD--PDEITYNSLISCLCRDGLVEEAIG 473

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +L  + +SG  P +I+YN ++ G CKV  I+ A+ +F E+  KG RP+  TY  LI G+
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 250/521 (47%), Gaps = 52/521 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+N   K+GK   ++  L+ +  +G  P+    T +I G       ++A R+ +++ +S 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESH 132

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD  AYNA+++GFCK+ R++ A  +L   +  GF+P + +Y+ +I  L   ++   A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               ++  +   P V+ Y ++I      G + +AMKLL +M  RG++PD Y YNA+I+G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G++++A  L   +  +   P+  ++ IL+      G  D+ +KL  +M   GC P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             ++ LI  LC+ G +++A +   K+ I K  T             D  S   ++   C 
Sbjct: 313 VTYSILISSLCRFGRIDEA-ISVLKVMIEKELT------------PDTYSYDPLISALCK 359

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A  I+  +  +G LPDI+ YN+++   CK GN N AL++F +L+  G  P+  +
Sbjct: 360 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 419

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I+ L        A  +   M   G  P    Y SL++  CR               
Sbjct: 420 YNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCR--------------- 464

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLIGLCQDGQV 651
                               G VE AI GLL+ D + + F+  +  Y I L+GLC+  ++
Sbjct: 465 -------------------DGLVEEAI-GLLD-DMEQSGFRPTVISYNIVLLGLCKVRRI 503

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
            +A+ +F+ ++E        + + LI G+   G+   AM++
Sbjct: 504 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 225/463 (48%), Gaps = 34/463 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+++  + LI G       E A +++ E+ +    P+ F Y  VISG C++NR + A ++
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQV 159

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +MK  G  PD V YN ++   C  R++  AL +L     D  +P + +Y+ LI+    
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               +EA     +M    + PD+  Y  +IRG+ + G V+ A +L++ +  +G  PD   
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L++ F + G  D+   L  E++ R   PN  T++ILI  +CR G +D+A  +   M 
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TLFLRLSQGGN-- 456
           +    P    ++ LI  LCK G L+ A  ++ Y +  G  P      T+   L + GN  
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399

Query: 457 ---RVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
               + +K          +S  TM+    + G   +A  ++  +   G  PD ITYNSLI
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLI 459

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  C+ G +  A+ L  +++  G RP  ++Y  ++ GL +V R +DA  +F +M + GC 
Sbjct: 460 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 519

Query: 564 PSPAVYKSLMT------WSCRRRKFSLAFSLWLQYLRDISGRD 600
           P+   Y  L+       W  R     LA SL   + RD+  +D
Sbjct: 520 PNETTYILLIEGIGFAGW--RTEAMELANSL---FSRDVISQD 557



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 197/401 (49%), Gaps = 6/401 (1%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R  L    + + +I  L       L  + LD+L   N       + +LI      G   +
Sbjct: 166 RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE 225

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++   +M      PD+Y YNA++    ++ +   A  +   +    C P+++++++L+ 
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLR 285

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                GK +   K++ EM  RG  PNK TY+I+IS LC+  R DEA  +   M +   +P
Sbjct: 286 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 345

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  +Y+ L++  CK  R+D A+ ++     +G +P + +Y+ ++  L +    ++A   +
Sbjct: 346 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 405

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            K+      P+V  Y  MI  L   G    A+ ++  M  +G+ PD   YN+LI   C  
Sbjct: 406 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           GL+++A  L  ++ +    P   ++ I++ G+C+   +DDA  +F +M + GC P+   +
Sbjct: 466 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 525

Query: 417 NALIDGLCKAG----ELEKANLLFYKMEIGKNPTLFLRLSQ 453
             LI+G+  AG     +E AN LF +  I ++   F RL++
Sbjct: 526 ILLIEGIGFAGWRTEAMELANSLFSRDVISQDS--FKRLNK 564



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 165/418 (39%), Gaps = 85/418 (20%)

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +AGK  +++  L  +  +G  PD      LIKGF +   +++A S  +EI +      +H
Sbjct: 80  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILE------SH 132

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T                              P V  +NA+I G CK   +E A  +  +M
Sbjct: 133 TE-----------------------------PDVFAYNAVISGFCKVNRIEAATQVLNRM 163

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        +    + D  +   M+   C    +  A K+L QL     +P +ITY
Sbjct: 164 -------------KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             LI      G IN A+KL +E+  +GL PD  TY  +I G+ +    E A  +   +  
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 270

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            GC P    Y  L+      R F L    W           DE  K + E   +G   N 
Sbjct: 271 KGCKPDVISYNILL------RAF-LNQGKW-----------DEGEKLVAEMFSRGCEPNK 312

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +                 Y+I +  LC+ G++ EA+++  V++E +      S   LI  
Sbjct: 313 VT----------------YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           LCK G LDLA+ +  Y + NG +  P + NY        K+     A  +  +++ +G
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCL--PDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 235/466 (50%), Gaps = 19/466 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PDV  YN +++  F++     A   Y+EM+     P+ VT++ +I  LSK+   + A+
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L  M    ++PN FTY  ++ G C   ++++A  +F KM   G  PD V YN+L++  
Sbjct: 67  EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  +  EA  +  S  K G  P + +Y  L+ G        E +     M +  ++ D 
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            ++ ++I   ++  KV + + + S MR++G+ P+   Y  +I G C LG LD A     +
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   PN   +T LI  +C     + A++L  ++   G  P++  FN ++D LCK G 
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + ++  LF  +  IG NP              D  +  T+++ YC AG +  A K+L  +
Sbjct: 303 VIESKKLFDLLGHIGVNP--------------DVITYSTLIDGYCLAGKMDGAMKLLTGM 348

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PD +TY++LING+CK+  +  AL LFKE++  G+ PD +TY  +++GL R  R 
Sbjct: 349 VSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRT 408

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
             A  ++ ++ ++G     + Y  ++    +     + F  +  Y+
Sbjct: 409 AAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCFRTYV 454



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 211/439 (48%), Gaps = 19/439 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G +K GD +KA  ++ +M +    PD   YN+++    + Q    A+ V   MV
Sbjct: 14  YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV 73

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN  T++ +++G   SG++E AI +  +M   GI P+  TY  ++  LC+  +  
Sbjct: 74  ----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCT 129

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA ++F  M   G  PD   Y  LL+G+     + E   LL    ++G       ++ LI
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               + ++ DE    + KM ++ + P+ V Y  +I GL + G++ DAM     M ++G+ 
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y +LI   C     ++A  L  EI  +   PN   F  ++  +C+ G V +++KL
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           F+ +   G  P V  ++ LIDG C AG+++ A  LL   + +G  P              
Sbjct: 310 FDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKP-------------- 355

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T++  YC    +  A  +  ++  +G  PDIITYN +++G  +      A +L+
Sbjct: 356 DSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELY 415

Query: 520 KELQLKGLRPDSVTYGTLI 538
             +   G + +  TY  ++
Sbjct: 416 ARITESGTQLELSTYNIIL 434



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 181/375 (48%), Gaps = 8/375 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
           +++I+ L K    D   + L       V V+ + F    ++ GY   G  EKA+  F KM
Sbjct: 50  NSIIAALSKAQAMDRAMEVL------TVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKM 103

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                +PDV  YN++++   +      A  ++  MVK    P+I T+  L++G +  G  
Sbjct: 104 CSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGAL 163

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                +L  M Q G+  +   + I+I    +  + DE   +F KM+  G +P+ V Y  +
Sbjct: 164 VEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTV 223

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G CKL R+D+A+         G  P +  Y+ LI  L    ++++A     ++ ++ I
Sbjct: 224 IDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGI 283

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P++V +  ++  L + G+V ++ KL   +   G+ PD   Y+ LI G+C  G +D A  
Sbjct: 284 NPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMK 343

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   +      P++ T++ LI G C+   ++DA  LF +ME  G  P +  +N ++ GL 
Sbjct: 344 LLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLF 403

Query: 425 KAGELEKANLLFYKM 439
           +      A  L+ ++
Sbjct: 404 RTRRTAAAKELYARI 418



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 9/310 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY   G   +  +    M +   Q D +++N ++    +++     + V+ +M 
Sbjct: 150 YGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    PN V +  +I+GL K G+ + A+   ++M  +G+ PN   YT +I  LC  ++ +
Sbjct: 210 QQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWE 269

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  ++ D G +P+ V +N +L+  CK  RV E+  L       G  P + +YS LI
Sbjct: 270 KAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG   A + D A      M    ++PD V Y  +I G  +  +++DA+ L  +M   G+ 
Sbjct: 330 DGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVN 389

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN ++ G         A+ L   I +  +     T+ I++          D  K 
Sbjct: 390 PDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILM---------DFAKT 440

Query: 401 FNKMEKAGCF 410
            + M   GCF
Sbjct: 441 NSLMMHFGCF 450



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 59/405 (14%)

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLF------LRLSQGGNRVH 459
           C P V  +N +IDGL K G+++KA + +++M    +  +   +      L  +Q  +R  
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 460 DKASLQTM---------VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           +  ++  M         +  YC++G   KA  I  ++   G  PD++TYNSL++  CK G
Sbjct: 67  EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               A K+F  +  +GL+PD  TYGTL++G        +   +   M QNG      V+ 
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFN 186

Query: 571 SLMTWSCRRRKFS---LAFSLWLQ---------YLRDISG-----RDDESMKSIEEFLQK 613
            L+    ++ K     L FS   Q         Y   I G     R D++M + E+ + K
Sbjct: 187 ILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246

Query: 614 GEVENAI---------------QGLLEMDFKLNDFQLAPYTIW----LIGLCQDGQVKEA 654
           G   N +               +   E+ F++ D  + P  ++    L  LC++G+V E+
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +F +L          +   LI G C  G +D AM +    +  G  L+P    Y    
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG--LKPDSVTYSTLI 364

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTR 759
             + K N+   A  L   M+S G + D   Y     +L G + TR
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITY---NIILHGLFRTR 406



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 88  ELRSGNVSVV----SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +L +G VSV     S  +  LI+GY K+   E AL  F +M+     PD+  YN +L+  
Sbjct: 343 KLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           FR +    A  +Y  + +      + T+++++   +K+
Sbjct: 403 FRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKT 440


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/423 (34%), Positives = 221/423 (52%), Gaps = 14/423 (3%)

Query: 120 SFG-KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           SFG KM+      ++Y YN ++N   R     LALA+  +M+KL   P+IVT + L+NG 
Sbjct: 99  SFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGF 158

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
               +   A+ ++D+M + G  P+  T+T +I GL   N+A EA  L  +M   GC PD 
Sbjct: 159 CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDL 218

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y A++NG CK    D AL LL   E       +  YS +ID L + +  D+A   + +
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 278

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  + + P+V+ Y  +I  L   G+  DA +LLSDM ER I P+   ++ALI  F   G 
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L +A  L  E+ KR   PN  T++ LI G C    + +A+++   M +  C P+V  +N 
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           LI+G CKA  ++K       ME      LF  +SQ G  V +  +  T++  +  A    
Sbjct: 399 LINGFCKAKRVDKG------ME------LFREMSQRG-LVGNTVTYTTLIHGFFQARDCD 445

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A  +  Q+   G  P+I+TYN L++G CK G +  A+ +F+ LQ   + PD  TY  +I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505

Query: 539 NGL 541
            G+
Sbjct: 506 EGM 508



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 256/534 (47%), Gaps = 50/534 (9%)

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
           SF + + F  +   Y Y  VL           A+ ++  M +    P+I+ FS L++ ++
Sbjct: 31  SFCRRRAFSGKTS-YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIA 89

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K  K ++ I   ++M   GI  N +TY I+I+  C+ +R   A  L  KM   G  PD V
Sbjct: 90  KMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
             N+LLNGFC   R+ +A+AL+    + G+ P   +++ LI GLF   +  EA A   +M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +   +PD+V YG ++ GL + G    A+ LL+ M    I  +   Y+ +I   C     
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D A +L  E+  +   PN  T++ LI  +C  G   DA +L + M +    P++  F+AL
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           ID   K G+L KA  L+ +M +   +P +F              +  +++  +C    + 
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIF--------------TYSSLINGFCMLDRLG 375

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A ++L  +     LP+++TYN+LINGFCK   ++  ++LF+E+  +GL  ++VTY TLI
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +G  +    ++A  +F QM   G  P+   Y  L+   C+  K + A  ++         
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF--------- 486

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                     E+LQ+  +E  I                 Y I + G+C+ G+ K
Sbjct: 487 ----------EYLQRSTMEPDIY---------------TYNIMIEGMCKAGKWK 515



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 220/499 (44%), Gaps = 49/499 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +   M Q    P+   ++ ++S + ++N+ D       KM+  G S +   YN L+N
Sbjct: 62  AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC+  R+  ALALL    K G+ P + + + L++G     R  +A A   +M E   +P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V +  +I GL    K  +A+ L+  M +RG  PD   Y A++ G C  G  D A +L 
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++       N   ++ +I  +C+    DDA  LF +ME  G  P+V  +++LI  LC  
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G    A+ L   M E   NP L               +   +++ +   G + KA K+  
Sbjct: 302 GRWSDASRLLSDMIERKINPNL--------------VTFSALIDAFVKKGKLVKAEKLYE 347

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ +    P+I TY+SLINGFC +  +  A ++ + +  K   P+ VTY TLING  +  
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +    +F +M Q G   +   Y +L                                 
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTL--------------------------------- 434

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I  F Q  + +NA     +M        +  Y I L GLC++G++ +A+ +F  L    
Sbjct: 435 -IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493

Query: 666 AIVTPPSCVKLIHGLCKRG 684
                 +   +I G+CK G
Sbjct: 494 MEPDIYTYNIMIEGMCKAG 512



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 170/337 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI G +      +A+    +M +  CQPD+  Y AV+N   ++    LAL +  +M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N+V +S +I+ L K    + A+ +  EM  +G+ PN  TY+ +IS LC   R 
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A RL   M +   +P+ V ++AL++ F K  ++ +A  L     K    P + +YS L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G     R  EA      M  +   P+VV Y  +I G  +A +V   M+L  +M +RG+
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           V +T  Y  LI GF      D A+ +  ++      PN  T+ IL+ G+C+NG +  A  
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +F  ++++   P +  +N +I+G+CKAG+ +   + F
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 123/259 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S VI  L K    D       E+ +  V      +  LIS     G    A      M E
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P++  ++A+++   +K   + A  +Y EM+K +  PNI T+S LING     +   
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +ML+ M ++  LPN  TY  +I+G C+  R D+   LF +M   G   + V Y  L++
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF + R  D A  + +     G  P + +Y+ L+DGL +  +  +A   +  +    +EP
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496

Query: 307 DVVLYGVMIRGLSEAGKVK 325
           D+  Y +MI G+ +AGK K
Sbjct: 497 DIYTYNIMIEGMCKAGKWK 515



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 199/445 (44%), Gaps = 25/445 (5%)

Query: 297 RKMFEEKIEPDVVLYGVMIR-GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           R+ F  K   D   Y  ++R GLS+  ++ DA+ L   M +    P    ++ L+     
Sbjct: 35  RRAFSGKTSYD---YREVLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK 90

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +   D   S   ++       N +T+ ILI   CR   +  A  L  KM K G  P +  
Sbjct: 91  MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNP-TLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            N+L++G C    +  A  L  +M E+G  P T+       G  +H+KAS          
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS---------- 200

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
                +A  ++ ++ + G  PD++TY +++NG CK G+ + AL L  +++   +  + V 
Sbjct: 201 -----EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I+ L +   E+DA  +F +M   G  P+   Y SL++  C   ++S A  L    +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315

Query: 594 -RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            R I+         I+ F++KG++  A +   EM  +  D  +  Y+  + G C   ++ 
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA  +  +++    +    +   LI+G CK   +D  M++F    + G +        L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVG 737
                ++D    +A  +  +M SVG
Sbjct: 436 HGFFQARDCD--NAQMVFKQMVSVG 458



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 179/425 (42%), Gaps = 22/425 (5%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A   +  M + +  P ++ +  ++  +++  K    +     M   GI  + Y YN L
Sbjct: 60  DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I  FC    L  A +L  ++ K    P+  T   L+ G C    + DA  L ++M + G 
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P    F  LI GL            F   +  +   L  R+ Q G +  D  +   +V 
Sbjct: 180 KPDTVTFTTLIHGL------------FLHNKASEAVALIDRMVQRGCQ-PDLVTYGAVVN 226

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G    A  +L ++  +    +++ Y+++I+  CK  + + AL LF E++ KG+RP
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           + +TY +LI+ L    R  DA R+   M +    P+   + +L+    ++ K   A  L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346

Query: 590 LQYL-RDISGRDDESMKSIEEFL---QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
            + + R I          I  F    + GE +  ++ ++  D   N   +  Y   + G 
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN---VVTYNTLINGF 403

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
           C+  +V + + +F  + +   +    +   LIHG  +    D A  VF   +  G  + P
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG--VHP 461

Query: 706 RVCNY 710
            +  Y
Sbjct: 462 NILTY 466


>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
           Japonica Group]
 gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
 gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
          Length = 665

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 282/597 (47%), Gaps = 33/597 (5%)

Query: 17  PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV---ISML 73
            +E  LE L   L    V  V+    +  +  RF+ WA  R     + +N A+   IS+L
Sbjct: 78  SVELELEGLHVELDPFVVNKVLRGLLDSGMAVRFYWWAESRPGF--YHNNFAIAYIISLL 135

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
              + F L  + L  +RS  V+    ++ VL++GY + G  +  +E+F +M    C+   
Sbjct: 136 FVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEM--VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
             YN  + +  +   F L +  YY M   K  CL    T+S  I  L +S + E+  ++L
Sbjct: 196 VDYNRFIGVMIKNCCFDL-VEKYYNMALAKGFCLTPF-TYSRWITALCQSNRIELVEELL 253

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +M + G  P+ +   I +  LC  NR  +A ++  KM   G  PD V Y  +++  C  
Sbjct: 254 TDMDKFGCFPDFWACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDH 313

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           RR  EA+ L     + G  P + +   LI GL + ++ DEA+    +M    I+ +V +Y
Sbjct: 314 RRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIY 373

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             +I G   AG ++ A K +S M+  G  PD   YN L+  +C +G+ D+A +L  ++  
Sbjct: 374 NALISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEM 433

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+ +++ IL+ G+C+   +D A    +   + G F  +   N LID  C+A ++  
Sbjct: 434 SGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNS 493

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  LF +M              G   +  D  +   ++      G  + A ++  Q+  +
Sbjct: 494 ALNLFKEM--------------GYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNT 539

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
             +P++  YN +++  CKVG+   A K+F ++  K + PD+VT+ TLI  L +  R  +A
Sbjct: 540 KIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEA 599

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL--------RDISGR 599
             +F +M   G  P    ++ +++      K +LA+ +W +Y+        RD+S R
Sbjct: 600 LDLFKEMRTKGVEPDNLTFRYIISGLLDEGKATLAYEIW-EYMMENGIILDRDVSER 655



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 129/571 (22%), Positives = 225/571 (39%), Gaps = 63/571 (11%)

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           + L  +  +G+  ++  Y ++++G  +  + D     F +M  SGC    V YN  +   
Sbjct: 146 EFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVM 205

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K    D            GF     +YS  I  L ++ R +        M +    PD 
Sbjct: 206 IKNCCFDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDF 265

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
               + +  L    ++ DA++++  M  +G  PD   Y  ++   CD     +A  L  E
Sbjct: 266 WACNIYVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEE 325

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +R   P+      LI G+C+N  VD+A +L ++M       +V ++NALI G  +   
Sbjct: 326 MVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWR--- 382

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
                                                        AG I KAYK +  + 
Sbjct: 383 ---------------------------------------------AGSIEKAYKTVSFMQ 397

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            +G  PD++TYN L+N +C +G  + A  L +++++ G+ PD  +Y  L+ GL +  + +
Sbjct: 398 RNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLD 457

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            AF       + G          L+   CR +K + A +L     +++  +  ++     
Sbjct: 458 KAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNL----FKEMGYKGIQADAVTY 513

Query: 609 EFLQKGEVENAIQGLLEMDF-KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVE 663
             L  G        L E  F ++ + ++ P    Y I L  LC+ G  K A  IF  + +
Sbjct: 514 GILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQ 573

Query: 664 CKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            +  V+P +     LI+ L K      A+D+F      G         Y++  LL   + 
Sbjct: 574 KE--VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLL--DEG 629

Query: 722 KKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           K   AY +   M   G  LD  +  +  S+L
Sbjct: 630 KATLAYEIWEYMMENGIILDRDVSERLISVL 660


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 244/503 (48%), Gaps = 67/503 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I    K+G  ++A+++F +M   +C PDV+ Y+ ++N   +++    A+ +  EM
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               CLPN VTF++LI+ LSK+G    A K++D M  +G +PN+ TY  +I GLC   + 
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 295

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L  KM  S C P+ V Y  ++NG  K RR ++ + +L S E+ G       YS L
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 355

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GLF+  + + A   +++M E+  +P+VV+YG  I GL    K  +A  +L +M  +G 
Sbjct: 356 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 415

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+ + Y++L+KGF   G   +A  +  E+  +D   N    ++L+ G+C +G + +A  
Sbjct: 416 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 475

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           ++  M   G  P V  ++++I GLC  G ++K   LFY+                     
Sbjct: 476 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE--------------------- 514

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                    MQ  E  + PD++TYN L N  C+  N+  A+ L 
Sbjct: 515 -------------------------MQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLL 549

Query: 520 KELQLKGLRPDSVTYGTLINGL-QRVDREED--------------------AFRIFGQMP 558
             +  +G  PDS+T    +  L +R++  +D                    A RI  +M 
Sbjct: 550 NSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEML 609

Query: 559 QNGCTPSPAVYKSLMTWSCRRRK 581
                P P+ +  ++  +C+ ++
Sbjct: 610 LRFLPPEPSTWSRVIQRTCKPKR 632



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 226/524 (43%), Gaps = 83/524 (15%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYN 137
           F    Q LD ++     +   +F ++     K     +A+  F +M  +  C+  V  +N
Sbjct: 81  FHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFN 140

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           +VLN+  ++  F  A   Y  +   N                                 +
Sbjct: 141 SVLNVIIQEGDFSYAFKFYLHVFGAN--------------------------------SK 168

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  PN  TY ++I  LC++ + D A   F +M    C+PD   Y+ L+NG CK RRVDEA
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 258 LALLRSFEKD-----------------------------------GFVPRLGSYSCLIDG 282
           + LL   + +                                   G VP   +Y+ LI G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L    + D+A +   KM   K  P+ V YG +I GL +  + +D + +L  M ERG   +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y Y++LI G    G  + A  L  E+ ++   PN   +   I G+CR+   D+A+ +  
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P+   +++L+ G  K G+ +KA L++ +M           +SQ  +  H+  
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM-----------MSQ--DMRHNVV 455

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++   C +G + +A  +   +   G  PD++ Y+S+I G C VG+++  LKLF E+
Sbjct: 456 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515

Query: 523 QLK--GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           Q +    RPD VTY  L N L R D    A  +   M   GC P
Sbjct: 516 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 187/359 (52%), Gaps = 2/359 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +++ L K    D     LDE+++         F VLI    K GD  +A +    M  
Sbjct: 213 STLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFL 272

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+   YN +++    K     AL++  +MV   C+PN VT+  +INGL K  + E 
Sbjct: 273 KGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAED 332

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            + +L  M +RG   N++ Y+ +ISGL +  +++ A RL+ +M + GC P+ V Y A ++
Sbjct: 333 GVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFID 392

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  + DEA  +L+     GF+P   +YS L+ G F+     +A   +++M  + +  
Sbjct: 393 GLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRH 452

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL- 365
           +VV   V++ GL E+G++++A+ + + M   G+ PD   Y+++IKG CD+G +D+   L 
Sbjct: 453 NVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLF 512

Query: 366 -QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +++  +  S P+  T+ IL   +CR   +  A  L N M   GC P     N  ++ L
Sbjct: 513 YEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/552 (25%), Positives = 239/552 (43%), Gaps = 51/552 (9%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF  LI   + S +     ++LD M + G +  +  + ++     + +   EA   F +
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125

Query: 229 M-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           M  D  C     ++N++LN                       + + G +S      +  K
Sbjct: 126 MANDLHCKQTVKSFNSVLN----------------------VIIQEGDFS------YAFK 157

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            Y   +    K F+    P+++ Y ++I+ L + G++  A+    +M  +   PD + Y+
Sbjct: 158 FYLHVFGANSKGFQ----PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYS 213

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            L+ G C    +D+A  L  E+     LPN  TF +LI  + +NG +  A KL + M   
Sbjct: 214 TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLK 273

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           GC P+   +N LI GLC  G+L+KA  L  KM   K            N+V     +  +
Sbjct: 274 GCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP---------NQVTYGTIINGL 324

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V+Q      +H    ILM + E G   +   Y+SLI+G  K G    A++L+KE+  KG 
Sbjct: 325 VKQRRAEDGVH----ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P+ V YG  I+GL R ++ ++A  I  +M   G  P+   Y SLM    ++     A  
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 440

Query: 588 LWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           +W + + +D+          +    + G +  A+     M  +     +  Y+  + GLC
Sbjct: 441 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 500

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
             G V + L +F  + +C+   + P  V    L + LC++  L  A+D+    L  G   
Sbjct: 501 DVGSVDKGLKLFYEM-QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDP 559

Query: 704 RPRVCNYLLRSL 715
               CN  L +L
Sbjct: 560 DSLTCNIFLETL 571



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 190/443 (42%), Gaps = 86/443 (19%)

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +G  P+   YN +IK  C LG +D+A     E+  ++  P+  T++ L+ G+C+   VD+
Sbjct: 168 KGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDE 227

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  L ++M+  GC P+   FN LID L K                               
Sbjct: 228 AVFLLDEMQAEGCLPNPVTFNVLIDALSKN------------------------------ 257

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                             G + +A K++  +   G +P+ +TYN+LI+G C  G ++ AL
Sbjct: 258 ------------------GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L +++      P+ VTYGT+INGL +  R ED   I   M + G   +  +Y SL++  
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359

Query: 577 CRRRKFSLAFSLWLQ------------YLRDISG--RD---DESMKSIEEFLQKGEVENA 619
            +  K   A  LW +            Y   I G  RD   DE+   ++E L KG + NA
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 620 I--QGLLEMDFKLNDFQLAPY-----------------TIWLIGLCQDGQVKEALNIFSV 660
                L++  FK  D Q A                   ++ L GLC+ G+++EAL +++ 
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY-LLRSLLFSK 719
           ++         +   +I GLC  G +D  + +F          RP V  Y +L + L  +
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 539

Query: 720 DNKKVHAYHLLCRMKSVGYDLDA 742
           DN    A  LL  M   G D D+
Sbjct: 540 DN-LTRAIDLLNSMLDEGCDPDS 561



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 39/307 (12%)

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL---AESGNLPDIIT 498
           G+    F R++   +      S  +++      G    A+K  + +      G  P+++T
Sbjct: 117 GEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLT 176

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN +I   CK+G I+ A+  F+E+ LK   PD  TY TL+NGL +  R ++A  +  +M 
Sbjct: 177 YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             GC P+P  +  L+    +    S A  L                  ++    KG V N
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKL------------------VDNMFLKGCVPN 278

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            +                 Y   + GLC  G++ +AL++   +V  K +    +   +I+
Sbjct: 279 EVT----------------YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIIN 322

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           GL K+   +  + + +   + G      + + L+  L   K+ K  +A  L   M   G 
Sbjct: 323 GLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLF--KEGKSENAVRLWKEMAEKGC 380

Query: 739 DLDACLY 745
             +  +Y
Sbjct: 381 KPNVVVY 387


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 250/507 (49%), Gaps = 35/507 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S V++ L   +  +L +   +E++ G +      + +++  + K G  E+A + F +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+E  C P+V  Y A+++   + +    A  ++  M+   CLPNIVT+S LI+G  K+G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            E A ++ + M                      PN  TY  ++ G C+ +R +EA +L  
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M   GC P+ + Y+AL++G CK+ ++DEA  +     + GF   L +YS LID  F+ K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     KM E    P+VV+Y  MI GL + GK  +A KL+  M E+G  P+   Y 
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           A+I GF  +G ++    L   +  +   PN  T+ +LI   C+NG +D A  L  +M++ 
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL-FLRLSQGGNRVHDKASLQT 466
                   +  +I+G  K   +E   LL    EIG++ T  FL +             + 
Sbjct: 844 HWPTHTAGYRKVIEGFNKEF-IESLGLL---DEIGQDDTAPFLSV------------YRL 887

Query: 467 MVEQYCTAGLIHKAYKILMQLAE-SGNLPDI-ITYNSLINGFCKVGNINGALKLFKELQL 524
           +++    A  +  A ++L ++A  S  L D   TYNSLI   C    +  A +LF E+  
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAF 551
           KG+ P+  ++ +LI GL R  +  +A 
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 172/734 (23%), Positives = 319/734 (43%), Gaps = 80/734 (10%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS-NSAVISMLLKPNGFDLYWQTLD 87
           LS++ V  V+     P     FF+WA ++   +  A   +A++ ++++ +   +  + L 
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ++R  +  V  +   VL+  + + G    ALE  G++K+F  +P    YN ++    +  
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249

Query: 148 LFLLALAVYYEM---------VKLNC-----------------------LPNIVTFSLLI 175
               A  ++ EM           L C                       +P+ V ++ LI
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLI 309

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL ++   E A+  L+ M     LPN  TY+ ++ G     +     R+   M   GC 
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------------- 282
           P    +N+L++ +C       A  LL+   K G +P    Y+ LI               
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429

Query: 283 ----------------------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                                       L  A +Y++A++  R+M  +   PD   Y  +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L  A K++ A  L  +M+  G+V D Y Y  ++  FC  GL++QAR    E+ +   
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+T LI    +   V  A +LF  M   GC P++  ++ALIDG CKAG++EKA  
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 435 LFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           +F +M   K   +  ++ +     +   +  +   +++ +C +  + +A K+L  ++  G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+ I Y++LI+G CKVG ++ A ++  E+   G      TY +LI+   +V R++ A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
           ++  +M +N C P+  +Y  ++   C+  K   A+ L +Q + +   + +    +  I+ 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPNVVTYTAMIDG 788

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F   G++E  ++ L  M  K        Y + +   C++G +  A N+   + +      
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848

Query: 670 PPSCVKLIHGLCKR 683
                K+I G  K 
Sbjct: 849 TAGYRKVIEGFNKE 862



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 168/691 (24%), Positives = 305/691 (44%), Gaps = 111/691 (16%)

Query: 96  VVSDVFFV-LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           V   VF+  LISG  +    E+A++   +M+   C P+V  Y+ +L     K+       
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V   M+   C P+   F+ L++    SG    A K+L +M + G +P    Y I+I  +C
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418

Query: 215 -----------------------------QIN------------RADEAYRLFLKMKDSG 233
                                        +IN            + ++A+ +  +M   G
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD   Y+ +LN  C   +++ A  L    ++ G V  + +Y+ ++D   +A   ++A 
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            W+ +M E    P+VV Y  +I    +A KV  A +L   M   G +P+   Y+ALI G 
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 354 CDLGLLDQARSL-----------QVEIW-----KRDSLPNTHTFTILICGMCRNGMVDDA 397
           C  G +++A  +            V+++          PN  T+  L+ G C++  V++A
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
           +KL + M   GC P+  +++ALIDGLCK G+L++A  +  +M E G   TL+        
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY-------- 710

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +  +++++Y        A K+L ++ E+   P+++ Y  +I+G CKVG  + A 
Sbjct: 711 ------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           KL + ++ KG +P+ VTY  +I+G   + + E    +  +M   G  P+   Y+ L+   
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824

Query: 577 CRRRKFSLAFSLWLQ------------YLRDISGRDDESMKSIEEFLQKGE--------- 615
           C+     +A +L  +            Y + I G + E ++S+    + G+         
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884

Query: 616 ----VENAIQGL-LEMDFKLNDFQLAPYTIWLI-----------GLCQDGQVKEALNIFS 659
               ++N I+   LEM  +L + ++A ++  L+            LC   +V+ A  +FS
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLE-EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            + +   I    S   LI GL +   +  A+
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 238/510 (46%), Gaps = 73/510 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +V  EM+    +P+  T+S ++N L  + K E+A  + +EM + G++ + +TYTI++ 
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+    ++A + F +M++ GC+P+ V Y AL++ + K ++V  A  L  +   +G +P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV----------------VLYGVMI 315
            + +YS LIDG  +A + ++A   + +M   K  PDV                V YG ++
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  ++ +V++A KLL  M   G  P+   Y+ALI G C +G LD+A+ ++ E+ +    
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
              +T++ LI    +    D A K+ +KM +  C P+V ++  +IDGLCK G+ ++A  L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766

Query: 436 FYKME--------------------IGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCT 473
              ME                    IGK  T    L + G++    +  + + +++  C 
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826

Query: 474 AGLIHKAYKILMQLAES---------------------------------GNLPDIITYN 500
            G +  A+ +L ++ ++                                    P +  Y 
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 501 SLINGFCKVGNINGALKLFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            LI+   K   +  AL+L +E+      L   S TY +LI  L   ++ E AF++F +M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           + G  P    + SL+    R  K S A  L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 213/509 (41%), Gaps = 56/509 (11%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+   C+      AL  L   +   F P   +Y+CLI    +A R D A   +R+M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             +  D          L + GK ++A+ L+        VPDT  Y  LI G C+  L ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEE 320

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +     LPN  T++ L+CG      +   +++ N M   GC+PS  +FN+L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ--------------- 465
             C +G+   A  L  KM + G  P   +     G+   DK SL                
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 466 ------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                       +     C+AG   KA+ ++ ++   G +PD  TY+ ++N  C    + 
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LF+E++  GL  D  TY  +++   +    E A + F +M + GCTP+   Y +L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--------- 623
               + +K S A  L+   L +    +  +  + I+   + G+VE A Q           
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 624 --LEMDFKLNDF-----QLAPYTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
             ++M FK  D       +  Y   L G C+  +V+EA  +   +     E   IV    
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA- 679

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
              LI GLCK G LD A +V     ++GF
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGF 705



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 4/180 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L+ + S  V+     + VLI    K G  + A     +MK+         Y  V+   
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE-G 858

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT--QRGILP 201
           F K+ F+ +L +  E+ + +  P +  + LLI+ L K+ + E+A+++L+E+      ++ 
Sbjct: 859 FNKE-FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
              TY  +I  LC  N+ + A++LF +M   G  P+  ++ +L+ G  +  ++ EAL LL
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 242/506 (47%), Gaps = 59/506 (11%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E   K L+ M  RG +P+    T +I G C+I +  +A  +   ++ SG  PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + YN L++G+CK   +D AL +L   ++    P + +Y+ ++  L  + +  +A     
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVL---DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  +++  PDV+ Y ++I    +   V  AMKLL +MR +G  PD   YN LI G C  G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A      +      PN  T  I++  MC  G   DA+KL + M + GC PSV  FN
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--------------FLRLSQGG 455
            LI+ LC+ G L +A  +  KM         +  NP L              +L +    
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  T++   C  G +  A +IL QL+  G  P +ITYN++I+G  KVG    A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +KL  E++ KGL+PD +TY +L++GL R  + ++A + F  +   G  P+   Y S+M  
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+ R+   A   +L Y+  IS R     K  E                           
Sbjct: 541 LCKSRQTDRAID-FLAYM--ISKR----CKPTE--------------------------- 566

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVL 661
           A YTI + G+  +G  KEAL++ + L
Sbjct: 567 ATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 222/459 (48%), Gaps = 18/459 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ ++G  +KA      +++    PDV  YN +++   +      AL V   + ++N
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMN 211

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ ++  L  SGK + A+++LD   Q+   P+  TYTI+I   C+ +   +A 
Sbjct: 212 VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M++ G  PD V YN L+NG CK  R+DEA+  L +    G  P + +++ ++  +
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R+ +A      M  +   P VV + ++I  L   G +  A+ +L  M   G  P++
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ GFC    +D+A      +  R   P+  T+  L+  +C++G VD A ++ N+
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           +   GC P +  +N +IDGL K G+ E+A  L  +M   G  P              D  
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP--------------DII 497

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++V      G + +A K    L   G  P+ ITYNS++ G CK    + A+     +
Sbjct: 498 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
             K  +P   TY  LI G+      ++A  +  ++   G
Sbjct: 558 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I    K +G     + LDE+R+         + VLI+G  K G  ++A++    M  
Sbjct: 255 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 314

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + CQP+V  +N +L        ++ A  +  +M++  C P++VTF++LIN L + G    
Sbjct: 315 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGR 374

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +L++M   G  PN  +Y  ++ G C+  + D A      M   GC PD V YN LL 
Sbjct: 375 AIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLT 434

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  +VD A+ +L      G  P L +Y+ +IDGL +  + + A     +M  + ++P
Sbjct: 435 ALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKP 494

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++ Y  ++ GLS  GKV +A+K   D+   GI P+   YN+++ G C     D+A    
Sbjct: 495 DIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +  +   P   T+TILI G+   G+  +A  L N++   G
Sbjct: 555 AYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 205/426 (48%), Gaps = 18/426 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS   K    D   Q LD +   NV+     +  ++      G  ++A+E   +  +
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +C PDV  Y  ++    ++     A+ +  EM      P++VT+++LING+ K G+ + 
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AIK L+ M   G  PN  T+ I++  +C   R  +A +L   M   GCSP  V +N L+N
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+   +  A+ +L      G  P   SY+ L+ G  + K+ D A  +   M      P
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V Y  ++  L + GKV  A+++L+ +  +G  P    YN +I G   +G  ++A  L 
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++   P+  T++ L+ G+ R G VD+A K F+ +E  G  P+   +N+++ GLCK+
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            + ++A + L Y +     PT              +A+   ++E     GL  +A  +L 
Sbjct: 545 RQTDRAIDFLAYMISKRCKPT--------------EATYTILIEGIAYEGLAKEALDLLN 590

Query: 486 QLAESG 491
           +L   G
Sbjct: 591 ELCSRG 596



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 216/454 (47%), Gaps = 32/454 (7%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L   G+++D  K L  M  RG +PD     +LI+GFC +G   +A  +   + +  +
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
           +P+  T+ +LI G C++G +D+A ++ ++M  A   P V  +N ++  LC +G+L++A  
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 237

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +L  +++    P              D  +   ++E  C    + +A K+L ++   G+ 
Sbjct: 238 VLDRQLQKECYP--------------DVITYTILIEATCKESGVGQAMKLLDEMRNKGSK 283

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TYN LING CK G ++ A+K    +   G +P+ +T+  ++  +    R  DA ++
Sbjct: 284 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 343

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEF 610
              M + GC+PS   +  L+ + CR+     A  +  +    + G    S+     +  F
Sbjct: 344 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM--PMHGCTPNSLSYNPLLHGF 401

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIV 668
            ++ +++ AI+ L  M  +     +  Y   L  LC+DG+V  A+ I + L    C  ++
Sbjct: 402 CKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVL 461

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              + V  I GL K G  + A+ +     + G  L+P +  Y       S++ K   A  
Sbjct: 462 ITYNTV--IDGLSKVGKTERAIKLLDEMRRKG--LKPDIITYSSLVSGLSREGKVDEAIK 517

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
               ++ +G   +A  Y    S++ G   +R+ +
Sbjct: 518 FFHDLEGLGIRPNAITY---NSIMLGLCKSRQTD 548



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 145/266 (54%), Gaps = 3/266 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   + G   +A++   KM    C P+   YN +L+   +
Sbjct: 346 DMLRKGCSPSVVT--FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCK 403

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ L+  L K GK +VA+++L++++ +G  P   T
Sbjct: 404 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLIT 463

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL ++ + + A +L  +M+  G  PD + Y++L++G  +  +VDEA+      E
Sbjct: 464 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 523

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P   +Y+ ++ GL ++++ D A  +   M  ++ +P    Y ++I G++  G  K
Sbjct: 524 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 583

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIK 351
           +A+ LL+++  RG+V  +      +K
Sbjct: 584 EALDLLNELCSRGLVKKSSAEQVAVK 609


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 227/452 (50%), Gaps = 26/452 (5%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E  +K L+ M  +G +P+    T +I G C+  +  +A R+   +++SG  PD
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + YN L+ G+CK   +D+AL +L   E+    P + +Y+ ++  L  + +  EA     
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVL---ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + +  PDV+ Y ++I        V  AMKLL +MR++G  PD   YN LI G C  G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A      +      PN  T  I++  MC  G   DA++L + M + GC PSV  FN
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--------------FLRLSQGG 455
            LI+ LC+   L +A  +  KM         +  NP L              +L +    
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  T++   C  G +  A +IL QL+  G  P +ITYN++I+G  KVG    A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           ++L +E++ KGL+PD +TY TL+ GL R  + ++A +IF  M      PS   Y ++M  
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            C+ ++ S A   +L Y+ +   +  E+  +I
Sbjct: 533 LCKAQQTSRAID-FLAYMVEKGCKPTEATYTI 563



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 211/439 (48%), Gaps = 18/439 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ + G  +KA      ++     PDV  YN ++    +      AL V   + +++
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMS 203

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ ++  L  SGK + A+++LD   QR   P+  TYTI+I   C  +   +A 
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M+  GC PD V YN L+NG CK  R+DEA+  L +    G  P + +++ ++  +
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R+ +A      M  +   P VV + ++I  L     +  A+ +L  M + G VP++
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ GFC    +D+A      +  R   P+  T+  L+  +C++G VD A ++ N+
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           +   GC P +  +N +IDGL K G+ E A  L  +M   G  P              D  
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKP--------------DII 489

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++      G + +A KI   +      P  +TYN+++ G CK    + A+     +
Sbjct: 490 TYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549

Query: 523 QLKGLRPDSVTYGTLINGL 541
             KG +P   TY  LI G+
Sbjct: 550 VEKGCKPTEATYTILIEGI 568



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 192/389 (49%), Gaps = 35/389 (8%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESF----------------------GKMKEF- 127
           N   V DV  + VLI GY K G+ +KALE                        GK+KE  
Sbjct: 169 NSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAM 228

Query: 128 ---------DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
                    +C PDV  Y  ++           A+ +  EM K  C P++VT+++LING+
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K G+ + AIK L+ M   G  PN  T+ I++  +C   R  +A RL   M   GCSP  
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V +N L+N  C+ R +  A+ +L    K G VP   SY+ L+ G  + K+ D A  +   
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M      PD+V Y  ++  L + GKV  A+++L+ +  +G  P    YN +I G   +G 
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            + A  L  E+ ++   P+  T++ L+ G+ R G VD+A K+F+ ME     PS   +NA
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNA 528

Query: 419 LIDGLCKAGELEKA-NLLFYKMEIGKNPT 446
           ++ GLCKA +  +A + L Y +E G  PT
Sbjct: 529 IMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 158/312 (50%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +G     + LDE+R          + VLI+G  K G  ++A++    M  + C+P+V  +
Sbjct: 257 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +L        ++ A  +  +M++  C P++VTF++LIN L +      AI +L++M +
Sbjct: 317 NIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G +PN  +Y  ++ G CQ  + D A      M   GC PD V YN LL   CK  +VD 
Sbjct: 377 HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+ +L      G  P L +Y+ +IDGL +  + + A     +M  + ++PD++ Y  ++R
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL   GKV +A+K+  DM    I P    YNA++ G C      +A      + ++   P
Sbjct: 497 GLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 556

Query: 377 NTHTFTILICGM 388
              T+TILI G+
Sbjct: 557 TEATYTILIEGI 568



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 199/409 (48%), Gaps = 27/409 (6%)

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           + +R L   G++++ +K L  M  +G +PD     +LI+GFC  G   +A  +   +   
Sbjct: 111 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENS 170

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
            ++P+  T+ +LI G C++G +D A ++  +M  A   P V  +N ++  LC +G+L++A
Sbjct: 171 GAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEA 227

Query: 433 -NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +L  +++    P              D  +   ++E  C    + +A K+L ++ + G
Sbjct: 228 MEVLDRQLQRECYP--------------DVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD++TYN LING CK G ++ A+K    +   G +P+ +T+  ++  +    R  DA 
Sbjct: 274 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAE 333

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           R+   M + GC+PS   +  L+ + CR+R    A  +  +  +     +  S    +  F
Sbjct: 334 RLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGF 393

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIV 668
            Q+ +++ AI+ L  M  +     +  Y   L  LC+DG+V  A+ I + L    C  ++
Sbjct: 394 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVL 453

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSL 715
              + V  I GL K G  + A+++     + G  L+P +  Y  LLR L
Sbjct: 454 ITYNTV--IDGLTKVGKTEYAVELLEEMRRKG--LKPDIITYSTLLRGL 498



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 142/266 (53%), Gaps = 3/266 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   +     +A++   KM +  C P+   YN +L+   +
Sbjct: 338 DMLRKGCSPSVVT--FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQ 395

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ L+  L K GK + A+++L++++ +G  P   T
Sbjct: 396 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLIT 455

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL ++ + + A  L  +M+  G  PD + Y+ LL G  +  +VDEA+ +    E
Sbjct: 456 YNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDME 515

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                P   +Y+ ++ GL +A++   A  +   M E+  +P    Y ++I G+++ G  +
Sbjct: 516 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAE 575

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIK 351
           +A++LL+++  RG V  +     ++K
Sbjct: 576 EALELLNELCSRGFVKKSSAEQVVVK 601



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 79/147 (53%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +++ L K    D   + L++L S   S V   +  +I G  KVG  E A+E   +M+ 
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+  Y+ +L    R+     A+ ++++M  L+  P+ VT++ ++ GL K+ +T  
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGL 213
           AI  L  M ++G  P + TYTI+I G+
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 45/265 (16%)

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G+R  ++ +    + +    G + +  K L ++   G++PD+I   SLI GFC+ G    
Sbjct: 100 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKK 159

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A ++ + L+  G  PD +TY  LI G  +    + A  +  +M      P    Y +++ 
Sbjct: 160 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILR 216

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C                   SG+  E+M+ ++  LQ+    + I              
Sbjct: 217 SLCD------------------SGKLKEAMEVLDRQLQRECYPDVIT------------- 245

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
              YTI +   C D  V +A+ +   + +  CK  V   +   LI+G+CK G LD A+  
Sbjct: 246 ---YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV--LINGICKEGRLDEAIK- 299

Query: 693 FLYTLKNGFILRPRVC--NYLLRSL 715
           FL  + + +  +P V   N +LRS+
Sbjct: 300 FLNNMPS-YGCKPNVITHNIILRSM 323



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 68/144 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K    +   + L+E+R   +      +  L+ G  + G  ++A++ F  M+ 
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEG 516

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P    YNA++    + Q    A+     MV+  C P   T+++LI G++  G  E 
Sbjct: 517 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIADEGLAEE 576

Query: 187 AIKMLDEMTQRGILPNKFTYTIVI 210
           A+++L+E+  RG +       +V+
Sbjct: 577 ALELLNELCSRGFVKKSSAEQVVV 600


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 158/564 (28%), Positives = 276/564 (48%), Gaps = 24/564 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ GY + G+  KA   F  M    CQ + Y Y  ++      +    AL ++  M + 
Sbjct: 108 ALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD 167

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN+  F+ LI+GL KSG+   A  + D M Q G++P+  TY  +I G  ++ R ++A
Sbjct: 168 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 227

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++   M+ +GC PD   YN L+ G C  ++ +EA  LL +  K+GF P + +++ LI+G
Sbjct: 228 LKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLING 286

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              A+++D+A     KM   K + D+ ++G +I  L +  ++K+A +LL+++   G+VP+
Sbjct: 287 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 346

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLF 401
              Y ++I G+C  G +D A  + +++ +RD   PN  T+  L+ G+ ++  +  A  L 
Sbjct: 347 VITYTSIIDGYCKSGKVDIALEV-LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 405

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            KM+K G  P+V  +  L+ G C   + + A  LF  ME            Q G +  D+
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMME------------QNGLK-PDE 452

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   + +  C AG   +AY  +++    G     + Y +LI+GF K GN + A  L + 
Sbjct: 453 HAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIER 509

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  +G  PDS TY  L++ L +  R  +A  I  QM   G   +   Y  L+    R  K
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
              A  ++ +     SG    +      I  + ++G +E+A   +L+M+ +     +  Y
Sbjct: 570 HDHAKRMYNEMTS--SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 639 TIWLIGLCQDGQVKEALNIFSVLV 662
            I + G    G +  A +    +V
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMV 651



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/601 (26%), Positives = 271/601 (45%), Gaps = 48/601 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+GY      + AL    KM    C+ D+ ++  ++N   +K     A  +  E+
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +PN++T++ +I+G  KSGK ++A+++L  M + G  PN +TY  ++ GL +  + 
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  L  KM+  G  P+ + Y  LL G C     D A  L    E++G  P   +Y+ L
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            D L +A R +EAY++   +  + +    V Y  +I G S+AG    A  L+  M + G 
Sbjct: 459 TDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC 515

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD+Y Y+ L+   C    L++A  +  ++  R        +TILI  M R G  D A++
Sbjct: 516 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 575

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGN 456
           ++N+M  +G  PS   +   I+  CK G LE A  L  KME   +  +   +  L  G  
Sbjct: 576 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 635

Query: 457 RVH--DKA--SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
            +   D+A  +L+ MV   C     +  Y +L++    GNL  + + ++  +G   +  +
Sbjct: 636 HMGYIDRAFSTLKRMVGASCEPN--YWTYCLLLKHLLKGNLAYVRSVDT--SGMWNLIEL 691

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           +   +L + +   GL P   TY +LI G  +  R E+A  +   M   G +P+  +Y  L
Sbjct: 692 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLL 751

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C  + F  A S                                +  + E  F+   
Sbjct: 752 IKCCCDTKFFEKALSF-------------------------------VSIMSECGFQP-- 778

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
            QL  Y + ++GLC +G  ++  ++F  L+E        +   L  GL K GY+D+   +
Sbjct: 779 -QLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 837

Query: 693 F 693
            
Sbjct: 838 L 838



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/595 (27%), Positives = 273/595 (45%), Gaps = 26/595 (4%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY ++V+   LP+ VT++ +I    K G    A +    + + G+ P  FT   ++ G C
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +     +A  LFL M   GC  +  +Y  L+ G C  + V +AL L    ++DG  P + 
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ LI GL ++ R  +A   +  M +  + P V+ Y  MI G S+ G++ DA+K+   M
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  PD + YN LI G CD    ++A  L     K    P   TFT LI G C     
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           DDA ++ NKM  + C   + +F  LI+ L K   L++A  L    EI  N          
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN--EISAN---------- 341

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V +  +  ++++ YC +G +  A ++L  +   G  P+  TYNSL+ G  K   ++ 
Sbjct: 342 -GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHK 400

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L  ++Q  G+ P+ +TY TL+ G       ++AFR+F  M QNG  P    Y  L  
Sbjct: 401 AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTD 460

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C+  +   A+S  ++  + ++         I+ F + G  + A   L+E   ++ D  
Sbjct: 461 ALCKAGRAEEAYSFIVR--KGVALTKVYYTTLIDGFSKAGNTDFAAT-LIE---RMIDEG 514

Query: 635 LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
             P    Y++ L  LC+  ++ EAL I   +       T  +   LI  + + G  D A 
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            ++     +G   +P    Y +    + K+ +   A  L+ +M+  G   D   Y
Sbjct: 575 RMYNEMTSSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 244/549 (44%), Gaps = 61/549 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I+ L+K +      + L+E+ +  +      +  +I GY K G  + ALE    M+   
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQP+ + YN+++    + +    A+A+  +M K   +PN++T++ L+ G       + A 
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL--------------------- 227
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   +                     
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 497

Query: 228 -----------KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                      +M D GC+PD   Y+ LL+  CK +R++EAL +L      G    + +Y
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID + R  ++D A   Y +M     +P    Y V I    + G+++DA  L+  M  
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------ 390
            G+ PD   YN LI G   +G +D+A S    +      PN  T+ +L+  + +      
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677

Query: 391 -----NGM-----VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                +GM     +D   +L  +M K G  P+V  +++LI G CKAG LE+A LL   M 
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM- 736

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                       +G +   D  +L  +++  C      KA   +  ++E G  P + +Y 
Sbjct: 737 ----------CGKGLSPNEDIYTL--LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 784

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            L+ G C  G+      LF +L   G   D V +  L +GL +    +  F++   M + 
Sbjct: 785 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844

Query: 561 GCTPSPAVY 569
            C  S   Y
Sbjct: 845 YCCISSQTY 853



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 172/642 (26%), Positives = 283/642 (44%), Gaps = 45/642 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LISG  K G    A   F  M +    P V  YNA++    +      AL +   M
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K  C P+  T++ LI GL    KTE A ++L+   + G  P   T+T +I+G C   + 
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R+  KM  S C  D   +  L+N   K  R+ EA  LL     +G VP + +Y+ +
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 353

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  ++ + D A    + M  +  +P+   Y  ++ GL +  K+  AM LL+ M++ GI
Sbjct: 354 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQ 398
           +P+   Y  L++G CD    D A  L  E+ +++ L P+ H + +L   +C+ G  ++A 
Sbjct: 414 IPNVITYTTLLQGQCDEHDFDNAFRL-FEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA- 471

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP-----TLFLRLS 452
             ++ + + G   +   +  LIDG  KAG  + A  L  +M + G  P     ++ L   
Sbjct: 472 --YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHAL 529

Query: 453 QGGNRVH------DKASLQ----------TMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
               R++      D+ SL+           ++++    G    A ++  ++  SG+ P  
Sbjct: 530 CKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSA 589

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            TY   IN +CK G +  A  L  +++ +G+ PD VTY  LI+G   +   + AF    +
Sbjct: 590 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 649

Query: 557 MPQNGCTPSPAVY----KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS------ 606
           M    C P+   Y    K L+  +    +      +W     DI+ +  E M        
Sbjct: 650 MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPT 709

Query: 607 -------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                  I  F + G +E A   L  M  K        YT+ +   C     ++AL+  S
Sbjct: 710 VTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVS 769

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           ++ EC       S   L+ GLC  G  +    +F   L+ G+
Sbjct: 770 IMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGY 811



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 170/390 (43%), Gaps = 28/390 (7%)

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
           CYN  ++      + +    +  ++ +   LP+T T+  +I   C+ G +  A + F  +
Sbjct: 35  CYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL 94

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-----------------------I 441
            + G  P     NAL+ G C+ GEL KA  LF  M                        +
Sbjct: 95  LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCV 154

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
            K   LFL + + G   + +A    ++   C +G +  A  +   + ++G +P ++TYN+
Sbjct: 155 RKALVLFLMMKRDGCSPNVRA-FTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +I G+ K+G +N ALK+ + ++  G  PD  TY TLI GL    + E+A  +     + G
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEG 272

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM-KSIEEFLQKGEVENAI 620
            TP+   + +L+   C   KF  A  +  + +      D +   K I   ++K  ++ A 
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 332

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           + L E+        +  YT  + G C+ G+V  AL +  ++          +   L++GL
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            K   L  AM +     K+G I  P V  Y
Sbjct: 393 VKDKKLHKAMALLTKMQKDGII--PNVITY 420



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 16/334 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  L K    +     LD++    +      + +LI    + G  + A   + +M  
Sbjct: 523 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 582

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P    Y   +N   ++     A  +  +M +    P++VT+++LI+G    G  + 
Sbjct: 583 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 642

Query: 187 AIKMLDEMTQRGILPNKFTYTIVI----------------SGLCQINRADEAYRLFLKMK 230
           A   L  M      PN +TY +++                SG+  +   D  ++L  +M 
Sbjct: 643 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 702

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G +P    Y++L+ GFCK  R++EA  LL      G  P    Y+ LI      K ++
Sbjct: 703 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 762

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A ++   M E   +P +  Y +++ GL   G  +    L  D+ E G   D   +  L 
Sbjct: 763 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 822

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            G    G +D    +   + KR    ++ T+ ++
Sbjct: 823 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 856



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 3/180 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D+ WQ L+ +    ++     +  LI+G+ K G  E+A      M      P+  IY  
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++      + F  AL+    M +    P + ++ LL+ GL   G  E    +  ++ + G
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 810

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
              ++  + I+  GL +    D  +++   M+   C      Y  + N   K+  V  +L
Sbjct: 811 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 867


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 253/518 (48%), Gaps = 35/518 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S V++ L   +  +L +   +E++ G +      + +++  + K G  E+A + F +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+E  C P+V  Y A+++   + +    A  ++  M+   CLPNIVT+S LI+G  K+G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            E A ++ + M                      PN  TY  ++ G C+ +R +EA +L  
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M   GC P+ + Y+AL++G CK+ ++DEA  +     + GF   L +YS LID  F+ K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     KM E    P+VV+Y  MI GL + GK  +A KL+  M E+G  P+   Y 
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           A+I GF  +G ++    L   +  +   PN  T+ +LI   C+NG +D A  L  +M++ 
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL-FLRLSQGGNRVHDKASLQT 466
                   +  +I+G  K   +E   LL    EIG++ T  FL +             + 
Sbjct: 844 HWPTHTAGYRKVIEGFNKEF-IESLGLL---DEIGQDDTAPFLSV------------YRL 887

Query: 467 MVEQYCTAGLIHKAYKILMQLAE-SGNLPDI-ITYNSLINGFCKVGNINGALKLFKELQL 524
           +++    A  +  A ++L ++A  S  L D   TYNSLI   C    +  A +LF E+  
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           KG+ P+  ++ +LI GL R  +  +A  +   +    C
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 172/734 (23%), Positives = 319/734 (43%), Gaps = 80/734 (10%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS-NSAVISMLLKPNGFDLYWQTLD 87
           LS++ V  V+     P     FF+WA ++   +  A   +A++ ++++ +   +  + L 
Sbjct: 130 LSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ++R  +  V  +   VL+  + + G    ALE  G++K+F  +P    YN ++    +  
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249

Query: 148 LFLLALAVYYEM---------VKLNC-----------------------LPNIVTFSLLI 175
               A  ++ EM           L C                       +P+ V ++ LI
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLI 309

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL ++   E A+  L+ M     LPN  TY+ ++ G     +     R+   M   GC 
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------------- 282
           P    +N+L++ +C       A  LL+   K G +P    Y+ LI               
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429

Query: 283 ----------------------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                                       L  A +Y++A++  R+M  +   PD   Y  +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L  A K++ A  L  +M+  G+V D Y Y  ++  FC  GL++QAR    E+ +   
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+T LI    +   V  A +LF  M   GC P++  ++ALIDG CKAG++EKA  
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609

Query: 435 LFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           +F +M   K   +  ++ +     +   +  +   +++ +C +  + +A K+L  ++  G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+ I Y++LI+G CKVG ++ A ++  E+   G      TY +LI+   +V R++ A 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
           ++  +M +N C P+  +Y  ++   C+  K   A+ L +Q + +   + +    +  I+ 
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPNVVTYTAMIDG 788

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F   G++E  ++ L  M  K        Y + +   C++G +  A N+   + +      
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848

Query: 670 PPSCVKLIHGLCKR 683
                K+I G  K 
Sbjct: 849 TAGYRKVIEGFNKE 862



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 170/704 (24%), Positives = 308/704 (43%), Gaps = 111/704 (15%)

Query: 83  WQTLDELRSGNVSVVSDVFFV-LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           W+    L      V   VF+  LISG  +    E+A++   +M+   C P+V  Y+ +L 
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
               K+       V   M+   C P+   F+ L++    SG    A K+L +M + G +P
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405

Query: 202 NKFTYTIVISGLC-----------------------------QIN------------RAD 220
               Y I+I  +C                             +IN            + +
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ +  +M   G  PD   Y+ +LN  C   +++ A  L    ++ G V  + +Y+ ++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +A   ++A  W+ +M E    P+VV Y  +I    +A KV  A +L   M   G +
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585

Query: 341 PDTYCYNALIKGFCDLGLLDQARSL-----------QVEIW-----KRDSLPNTHTFTIL 384
           P+   Y+ALI G C  G +++A  +            V+++          PN  T+  L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
           + G C++  V++A+KL + M   GC P+  +++ALIDGLCK G+L++A  +  +M E G 
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             TL+              +  +++++Y        A K+L ++ E+   P+++ Y  +I
Sbjct: 706 PATLY--------------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CKVG  + A KL + ++ KG +P+ VTY  +I+G   + + E    +  +M   G  
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQ------------YLRDISGRDDESMKSIEEFL 611
           P+   Y+ L+   C+     +A +L  +            Y + I G + E ++S+    
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLD 871

Query: 612 QKGE-------------VENAIQGL-LEMDFKLNDFQLAPYTIWLI-----------GLC 646
           + G+             ++N I+   LEM  +L + ++A ++  L+            LC
Sbjct: 872 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE-EVATFSATLVDYSSTYNSLIESLC 930

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
              +V+ A  +FS + +   I    S   LI GL +   +  A+
Sbjct: 931 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 238/510 (46%), Gaps = 73/510 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +V  EM+    +P+  T+S ++N L  + K E+A  + +EM + G++ + +TYTI++ 
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+    ++A + F +M++ GC+P+ V Y AL++ + K ++V  A  L  +   +G +P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV----------------VLYGVMI 315
            + +YS LIDG  +A + ++A   + +M   K  PDV                V YG ++
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  ++ +V++A KLL  M   G  P+   Y+ALI G C +G LD+A+ ++ E+ +    
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
              +T++ LI    +    D A K+ +KM +  C P+V ++  +IDGLCK G+ ++A  L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766

Query: 436 FYKME--------------------IGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCT 473
              ME                    IGK  T    L + G++    +  + + +++  C 
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826

Query: 474 AGLIHKAYKILMQLAES---------------------------------GNLPDIITYN 500
            G +  A+ +L ++ ++                                    P +  Y 
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886

Query: 501 SLINGFCKVGNINGALKLFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            LI+   K   +  AL+L +E+      L   S TY +LI  L   ++ E AF++F +M 
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           + G  P    + SL+    R  K S A  L
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 213/509 (41%), Gaps = 56/509 (11%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+   C+      AL  L   +   F P   +Y+CLI    +A R D A   +R+M  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             +  D          L + GK ++A+ L+        VPDT  Y  LI G C+  L ++
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEE 320

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +     LPN  T++ L+CG      +   +++ N M   GC+PS  +FN+L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ--------------- 465
             C +G+   A  L  KM + G  P   +     G+   DK SL                
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 466 ------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                       +     C+AG   KA+ ++ ++   G +PD  TY+ ++N  C    + 
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LF+E++  GL  D  TY  +++   +    E A + F +M + GCTP+   Y +L+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--------- 623
               + +K S A  L+   L +    +  +  + I+   + G+VE A Q           
Sbjct: 561 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620

Query: 624 --LEMDFKLNDF-----QLAPYTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
             ++M FK  D       +  Y   L G C+  +V+EA  +   +     E   IV    
Sbjct: 621 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA- 679

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
              LI GLCK G LD A +V     ++GF
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGF 705


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 177/652 (27%), Positives = 297/652 (45%), Gaps = 25/652 (3%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV-ISMLLKP 76
           +E  +  LL  L    V +V++   + +V   FF W+ ++ R R       V + +L K 
Sbjct: 37  LEGKMRHLLRGLKPRLVCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKT 96

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
                  + L  +    +      F  ++  Y + G    A++    M++   +P++ + 
Sbjct: 97  KLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVC 156

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  +++     +   AL     M  L  +PN+VT++ LI G     + E A++++ EM  
Sbjct: 157 NTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPL 216

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +G  P+K +Y  V+  LC+  R  E   +  KM+D+    D V YN L++  CK +  DE
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE 276

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           AL  LR  +K GF      YS ++D   +  R D+A     +MF     PDVV Y  +I 
Sbjct: 277 ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIIN 336

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G S+AG+V  A K+L  M + G  P+T  Y A +KG C  G   +AR +     ++   P
Sbjct: 337 GFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTP 396

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+++++ G  R G + DA  +  +M   G FP+    N L+  LC+ G +++A    
Sbjct: 397 NAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFM 456

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +          L +    N V    +  T++ ++C    I  A  +L  +  S   PD 
Sbjct: 457 EEC---------LNMGCAVNAV----NFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDA 503

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TY ++I+   K G I  A +L  ++  KG+ P  VTY T+I+   ++ R ED   +  +
Sbjct: 504 VTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDK 563

Query: 557 M--PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQK 613
           M   Q   T    V + L T+         A  L  + LR  S  D  +   + E +L+K
Sbjct: 564 MLTRQECRTAFNQVIEKLCTFG----NLEAADKLLGKVLRTASRIDANTCHVLMESYLRK 619

Query: 614 GEVENAIQGLLEMDFK--LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           G   +A +    M  +  + D +L         L Q+G+ +EA N+F   VE
Sbjct: 620 GIPLSAYKVACRMFSRSLIPDLKLCEKVCK--KLMQEGKSEEADNLFLRFVE 669



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 237/579 (40%), Gaps = 88/579 (15%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D + Y  +L+   K +    A  +LR   + G       + C++    RA +   A    
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M +  IEP++++    I  L  A  ++ A++ L  M+  GI+P+   YN LIKG+CDL
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             ++ A  L  E+  +   P+  ++  ++  +C+N  + +   +  KME          +
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N LI  LCK    ++A               FLR +Q      DK     +V+ YC  G 
Sbjct: 262 NTLIHMLCKHQHADEA-------------LQFLREAQKRGFQVDKVGYSAIVDSYCKEGR 308

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A +I+ ++   G +PD++TY ++INGF + G +  A K+ +++   G +P++V+Y  
Sbjct: 309 MDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTA 368

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA----------- 585
            + GL +     +A  +     +   TP+   Y  +M    R  K S A           
Sbjct: 369 FLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKG 428

Query: 586 -------FSLWLQYLRDISGRDDESMKSIEE-------------------FLQKGEVENA 619
                   +L LQ L  I GR DE+ K +EE                   F Q+ ++E A
Sbjct: 429 FFPTPVEINLLLQSLCRI-GRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAA 487

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH- 678
           +  L +M           YT  +  L + G+++EA  +   +++     TP +   +IH 
Sbjct: 488 LSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHR 547

Query: 679 --------------------------------GLCKRGYLDLAMDVFLYTLKNGFILRPR 706
                                            LC  G L+ A  +    L+    +   
Sbjct: 548 YGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDAN 607

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRM--KSVGYDLDAC 743
            C+ L+ S L  +    + AY + CRM  +S+  DL  C
Sbjct: 608 TCHVLMESYL--RKGIPLSAYKVACRMFSRSLIPDLKLC 644


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 280/597 (46%), Gaps = 15/597 (2%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPNIVTFSLLINGLSK 180
           +M E   +PD   YN V+           AL + + MVK +  C PN+VT++ +I+GL +
Sbjct: 180 RMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFR 239

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+   A  +  EM Q+G++P+  TYT +I  LC+    D+A  +  +M  +G  P+ V 
Sbjct: 240 EGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVT 299

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN +++G+    +  E   + R     G +P + + +  +  L +  +  EA  ++  M 
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMA 359

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            +  +P++V Y V++ G +  G   D + L + M   GIV D   +N +I  +   G++D
Sbjct: 360 AKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMD 419

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +   +  ++ ++  +P+  T+ I+I    R G + DA   FN+M   G  P   ++++LI
Sbjct: 420 ETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLI 479

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            G C  G L KA  L  +M           +S+G  R  +     +++   C  G + +A
Sbjct: 480 QGFCMHGNLVKAKELVSEM-----------MSRGIPR-PNIVFFNSIINSLCKEGRVVEA 527

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           + I   +   G  PD+IT+NSLI+G+  VG I  A  +   +   G+ PD V+Y TLI+G
Sbjct: 528 HDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDG 587

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             R  R +D   +FG+M   G  P+   Y  ++       +   A  +  + +   +  D
Sbjct: 588 YCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMD 647

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFS 659
             +   I   L +   ++    + +    +N  F +A     +  + +  + +EA  +F 
Sbjct: 648 ISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFD 707

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            +     +    +   +I  L K G ++ A ++F    K+G     R+ NY++R LL
Sbjct: 708 SISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLL 764



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 261/574 (45%), Gaps = 50/574 (8%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           +SG  S     +  +I G ++ G+  KA   F +M +    PDV  Y ++++   + +  
Sbjct: 219 KSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAM 278

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  V  +M+     PN VT++ +I+G S SG+ +    M  EMT +G++PN  T    
Sbjct: 279 DKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSY 338

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +S LC+  ++ EA   F  M   G  P+ V Y+ LL+G+       + L L  S E +G 
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           V     ++ +ID   +    DE    + +M E+ + PD   YG++I   S  G++ DAM 
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGM 388
             + M   G+ P+   Y++LI+GFC  G L +A+ L  E+  R    PN   F  +I  +
Sbjct: 459 KFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSL 518

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTL 447
           C+ G V +A  +F+ +   G  P V  FN+LIDG    G++EKA  +L   +  G  P  
Sbjct: 519 CKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP-- 576

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D  S  T+++ YC  G I     +  ++   G  P  ITY  +++G  
Sbjct: 577 ------------DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             G   GA K+  E+   G   D  T G ++ GL R + +++A  +F ++       + A
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
           +  +++    + RK                   +E+ +  +     G V NA        
Sbjct: 685 IINTMIDAMYKVRK------------------REEAKELFDSISATGLVPNA-------- 718

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                   + Y + +  L ++G V+EA N+FS++
Sbjct: 719 --------STYGVMIKNLLKEGSVEEADNMFSLM 744



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 264/589 (44%), Gaps = 60/589 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P V  YN +++   R +   +  A++   +K     +++  S+L+  L  + +++  + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 191 L-DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNG 247
           L   M + G+ P+  +Y  V+  LC+ +R+  A  L   M  K  GCSP+ V YN +++G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             +   V +A  L     + G VP + +Y+ +ID L +A+  D+A    R+M     +P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            V Y  MI G S +G+ K+   +  +M  +G++P+    N+ +   C  G   +A     
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN  T+++L+ G    G   D   LFN ME  G      +FN +ID   K G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 428 ELEKANLLFYKM-EIGKNP------------TLFLRLSQGGNRVHDKASL---------Q 465
            +++  L+F +M E G  P            +   RL+   ++ +   ++          
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESG-NLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
           ++++ +C  G + KA +++ ++   G   P+I+ +NS+IN  CK G +  A  +F  +  
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G RPD +T+ +LI+G   V + E AF +   M   G  P    Y +L+   CR      
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR------ 590

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                       +GR D+ +    E L KG     I                 Y I L G
Sbjct: 591 ------------NGRIDDGLILFGEMLSKGVKPTTIT----------------YGIILHG 622

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           L  DG+   A  +   ++E    +   +C  ++ GLC+    D A+ +F
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF 671



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 222/522 (42%), Gaps = 58/522 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L K    D     L ++       +S+ F                         
Sbjct: 266 TSIIDALCKARAMDKAELVLRQM-------ISNGF------------------------- 293

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP+   YN +++       +     ++ EM     +PNIVT +  ++ L K GK++ 
Sbjct: 294 ---QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +  D M  +G  PN  TY++++ G        +   LF  M+ +G   D   +N +++
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVID 410

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            + K   +DE + +    ++ G +P   +Y  +I    R  R  +A   + +M    ++P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARSL 365
           + ++Y  +I+G    G +  A +L+S+M  RGI  P+   +N++I   C  G + +A  +
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+  TF  LI G    G ++ A  + + M  AG  P V  +N LIDG C+
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR 590

Query: 426 AGELEKANLLFYKM-EIGKNPT------LFLRLSQGGNRVHDKASLQTMVEQ-----YCT 473
            G ++   +LF +M   G  PT      +   L   G  V  K     M+E        T
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 474 AGLI----------HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            G+I           +A  +  +L       +I   N++I+   KV     A +LF  + 
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSIS 710

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             GL P++ TYG +I  L +    E+A  +F  M ++GC PS
Sbjct: 711 ATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPS 752



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 18/341 (5%)

Query: 69  VISMLLKPNGFDLYW---------------QTLDELRSGNVSVVSDVFF-VLISGYYKVG 112
           +I+M LKP G   +                + + E+ S  +   + VFF  +I+   K G
Sbjct: 463 MIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEG 522

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
              +A + F  +     +PDV  +N++++          A  V   M+     P++V+++
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYN 582

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            LI+G  ++G+ +  + +  EM  +G+ P   TY I++ GL    R   A ++  +M +S
Sbjct: 583 TLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G + D      +L G C+    DEA+A+ +          +   + +ID +++ ++ +EA
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +  +    + P+   YGVMI+ L + G V++A  + S M + G  P +   N +I+ 
Sbjct: 703 KELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRV 762

Query: 353 FCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNG 392
             + G + +A +   ++  KR SL  + T ++L+    R G
Sbjct: 763 LLEKGEIVKAGNYMFKVDGKRISLEAS-TVSLLMALFSREG 802



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 46/408 (11%)

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           R  + E   R +LP   T+ IL+   CR         LF +  K G    V + + L+  
Sbjct: 104 RICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKC 163

Query: 423 LCKAGELEK-ANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           L  A   +   NLL ++M E+G  P              D  S  T+V+  C      +A
Sbjct: 164 LYHAKRSDDVVNLLLHRMPELGVEP--------------DTISYNTVVKTLCEDSRSQRA 209

Query: 481 YKILMQLAE--SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
             +L  + +   G  P+++TYN++I+G  + G ++ A  LF E+  +G+ PD VTY ++I
Sbjct: 210 LDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSII 269

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ---YLRD 595
           + L +    + A  +  QM  NG  P+       +T++C    +S++   W +     R+
Sbjct: 270 DALCKARAMDKAELVLRQMISNGFQPNK------VTYNCMIHGYSIS-GQWKETAGMFRE 322

Query: 596 ISGRD--------DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           ++ +         +  M S+    + G+ + A +    M  K +   L  Y++ L G   
Sbjct: 323 MTSQGLMPNIVTCNSYMSSL---CKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYAT 379

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKL-IHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +G   + LN+F+ + E   IV       + I    KRG +D  M +F    + G I  P 
Sbjct: 380 EGCFVDMLNLFNSM-EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVI--PD 436

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
            C Y +    FS+  +   A     +M ++G   +  +Y    SL+ G
Sbjct: 437 ACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY---HSLIQG 481



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 105/267 (39%), Gaps = 35/267 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY  VG  EKA      M     +PDV  YN +++   R       L ++ EM
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEM 604

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN-- 217
           +     P  +T+ ++++GL   G+T  A KM  EM + G   +  T  I++ GLC+ N  
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664

Query: 218 ---------------------------------RADEAYRLFLKMKDSGCSPDFVAYNAL 244
                                            + +EA  LF  +  +G  P+   Y  +
Sbjct: 665 DEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVM 724

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    K   V+EA  +    EK G  P     + +I  L       +A  +  K+  ++I
Sbjct: 725 IKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRI 784

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLL 331
             +     +++   S  GK  + +KLL
Sbjct: 785 SLEASTVSLLMALFSREGKYWEDVKLL 811


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 253/518 (48%), Gaps = 35/518 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S V++ L   +  +L +   +E++ G +      + +++  + K G  E+A + F +
Sbjct: 443 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 502

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+E  C P+V  Y A+++   + +    A  ++  M+   CLPNIVT+S LI+G  K+G+
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            E A ++ + M                      PN  TY  ++ G C+ +R +EA +L  
Sbjct: 563 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 622

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M   GC P+ + Y+AL++G CK+ ++DEA  +     + GF   L +YS LID  F+ K
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 682

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     KM E    P+VV+Y  MI GL + GK  +A KL+  M E+G  P+   Y 
Sbjct: 683 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 742

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           A+I GF  +G ++    L   +  +   PN  T+ +LI   C+NG +D A  L  +M++ 
Sbjct: 743 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 802

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL-FLRLSQGGNRVHDKASLQT 466
                   +  +I+G  K   +E   LL    EIG++ T  FL +             + 
Sbjct: 803 HWPTHTAGYRKVIEGFNKEF-IESLGLL---DEIGQDDTAPFLSV------------YRL 846

Query: 467 MVEQYCTAGLIHKAYKILMQLAE-SGNLPDI-ITYNSLINGFCKVGNINGALKLFKELQL 524
           +++    A  +  A ++L ++A  S  L D   TYNSLI   C    +  A +LF E+  
Sbjct: 847 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 906

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           KG+ P+  ++ +LI GL R  +  +A  +   +    C
Sbjct: 907 KGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 944



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 172/734 (23%), Positives = 318/734 (43%), Gaps = 80/734 (10%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFAS-NSAVISMLLKPNGFDLYWQTLD 87
           LS++ V  V+     P     FF+WA ++   +  A   +A++ ++++ +   +  + L 
Sbjct: 89  LSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 148

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           ++R  +  V      VL+  + + G    ALE  G++K+F  +P    YN ++    +  
Sbjct: 149 QIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 208

Query: 148 LFLLALAVYYEM---------VKLNC-----------------------LPNIVTFSLLI 175
               A  ++ EM           L C                       +P+ V ++ LI
Sbjct: 209 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLI 268

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL ++   E A+  L+ M     LPN  TY+ ++ G     +     R+   M   GC 
Sbjct: 269 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 328

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------------- 282
           P    +N+L++ +C       A  LL+   K G +P    Y+ LI               
Sbjct: 329 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLL 388

Query: 283 ----------------------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
                                       L  A +Y++A++  R+M  +   PD   Y  +
Sbjct: 389 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 448

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L  A K++ A  L  +M+  G+V D Y Y  ++  FC  GL++QAR    E+ +   
Sbjct: 449 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 508

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+T LI    +   V  A +LF  M   GC P++  ++ALIDG CKAG++EKA  
Sbjct: 509 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 568

Query: 435 LFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           +F +M   K   +  ++ +     +   +  +   +++ +C +  + +A K+L  ++  G
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+ I Y++LI+G CKVG ++ A ++  E+   G      TY +LI+   +V R++ A 
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
           ++  +M +N C P+  +Y  ++   C+  K   A+ L +Q + +   + +    +  I+ 
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL-MQMMEEKGCQPNVVTYTAMIDG 747

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F   G++E  ++ L  M  K        Y + +   C++G +  A N+   + +      
Sbjct: 748 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 807

Query: 670 PPSCVKLIHGLCKR 683
                K+I G  K 
Sbjct: 808 TAGYRKVIEGFNKE 821



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 170/704 (24%), Positives = 308/704 (43%), Gaps = 111/704 (15%)

Query: 83  WQTLDELRSGNVSVVSDVFFV-LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           W+    L      V   VF+  LISG  +    E+A++   +M+   C P+V  Y+ +L 
Sbjct: 245 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 304

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
               K+       V   M+   C P+   F+ L++    SG    A K+L +M + G +P
Sbjct: 305 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 364

Query: 202 NKFTYTIVISGLC-----------------------------QIN------------RAD 220
               Y I+I  +C                             +IN            + +
Sbjct: 365 GYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 424

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ +  +M   G  PD   Y+ +LN  C   +++ A  L    ++ G V  + +Y+ ++
Sbjct: 425 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 484

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +A   ++A  W+ +M E    P+VV Y  +I    +A KV  A +L   M   G +
Sbjct: 485 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 544

Query: 341 PDTYCYNALIKGFCDLGLLDQARSL-----------QVEIW-----KRDSLPNTHTFTIL 384
           P+   Y+ALI G C  G +++A  +            V+++          PN  T+  L
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
           + G C++  V++A+KL + M   GC P+  +++ALIDGLCK G+L++A  +  +M E G 
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             TL+              +  +++++Y        A K+L ++ E+   P+++ Y  +I
Sbjct: 665 PATLY--------------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 710

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CKVG  + A KL + ++ KG +P+ VTY  +I+G   + + E    +  +M   G  
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 770

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQ------------YLRDISGRDDESMKSIEEFL 611
           P+   Y+ L+   C+     +A +L  +            Y + I G + E ++S+    
Sbjct: 771 PNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLD 830

Query: 612 QKGE-------------VENAIQGL-LEMDFKLNDFQLAPYTIWLI-----------GLC 646
           + G+             ++N I+   LEM  +L + ++A ++  L+            LC
Sbjct: 831 EIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE-EVATFSATLVDYSSTYNSLIESLC 889

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
              +V+ A  +FS + +   I    S   LI GL +   +  A+
Sbjct: 890 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 238/510 (46%), Gaps = 73/510 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +V  EM+    +P+  T+S ++N L  + K E+A  + +EM + G++ + +TYTI++ 
Sbjct: 426 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 485

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+    ++A + F +M++ GC+P+ V Y AL++ + K ++V  A  L  +   +G +P
Sbjct: 486 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 545

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV----------------VLYGVMI 315
            + +YS LIDG  +A + ++A   + +M   K  PDV                V YG ++
Sbjct: 546 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 605

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  ++ +V++A KLL  M   G  P+   Y+ALI G C +G LD+A+ ++ E+ +    
Sbjct: 606 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 665

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
              +T++ LI    +    D A K+ +KM +  C P+V ++  +IDGLCK G+ ++A  L
Sbjct: 666 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 725

Query: 436 FYKME--------------------IGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCT 473
              ME                    IGK  T    L + G++    +  + + +++  C 
Sbjct: 726 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 785

Query: 474 AGLIHKAYKILMQLAES---------------------------------GNLPDIITYN 500
            G +  A+ +L ++ ++                                    P +  Y 
Sbjct: 786 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 845

Query: 501 SLINGFCKVGNINGALKLFKELQL--KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            LI+   K   +  AL+L +E+      L   S TY +LI  L   ++ E AF++F +M 
Sbjct: 846 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 905

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           + G  P    + SL+    R  K S A  L
Sbjct: 906 KKGVIPEMQSFCSLIKGLFRNSKISEALLL 935



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 213/509 (41%), Gaps = 56/509 (11%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+   C+      AL  L   +   F P   +Y+CLI    +A R D A   +R+M  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             +  D          L + GK ++A+ L+        VPDT  Y  LI G C+  L ++
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEE 279

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +     LPN  T++ L+CG      +   +++ N M   GC+PS  +FN+L+ 
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ--------------- 465
             C +G+   A  L  KM + G  P   +     G+   DK SL                
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399

Query: 466 ------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                       +     C+AG   KA+ ++ ++   G +PD  TY+ ++N  C    + 
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LF+E++  GL  D  TY  +++   +    E A + F +M + GCTP+   Y +L+
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGL--------- 623
               + +K S A  L+   L +    +  +  + I+   + G+VE A Q           
Sbjct: 520 HAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579

Query: 624 --LEMDFKLNDF-----QLAPYTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
             ++M FK  D       +  Y   L G C+  +V+EA  +   +     E   IV    
Sbjct: 580 PDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA- 638

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
              LI GLCK G LD A +V     ++GF
Sbjct: 639 ---LIDGLCKVGKLDEAQEVKTEMSEHGF 664


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 304/679 (44%), Gaps = 83/679 (12%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F VLI GY + G+  +A+E    MK     PD+  YN ++N   +      A  +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +N  PN++T++ LI+   KS   E A+ M DEMT + ++P+  TYT +++GLC+  + +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F +M++ G  P+  +Y  L++   K   V EA  L       G    +  Y+ L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGLF+A   + A   ++ + EE + P+ V Y  +I G  + G V     LL +M E+ I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y++++ G+   GLL++A  +  ++ +R+ LPN   +  LI G  +      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M+  G   +  + ++ ++ L ++G +E+A+ LF  M           +S+G   + D
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM-----------MSRG--LLPD 366

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAES------------------------------ 490
           + +  +M++ +  AG    A+ I  ++ E                               
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 491 ----GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
               G  PD  T+N++IN +CK GN+  ALKL  E++  GL+P+S+T   L+  L     
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E    +   M   G  P+P  +K+++  S + R+  +   +  Q               
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ--------------- 531

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                           L+ M  KL+   L+ Y   +   C+ G ++ A  +F  ++    
Sbjct: 532 ----------------LVGMGVKLD---LSTYNTLISTFCRLGMIRRATLVFKDMMGKGI 572

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   LIHG C   +L  A  V    L  G        N LL  L  ++  K+  A
Sbjct: 573 LADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE--A 630

Query: 727 YHLLCRMKSVGYDLDACLY 745
             L+ +MK  G   +A  Y
Sbjct: 631 AGLVNQMKERGLVPNATTY 649



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 234/475 (49%), Gaps = 14/475 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  L+ G +K G    A + F  + E    P+   Y+A+++   +         +  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + +  PN++ +S +++G +K G    A+ ++ +M QR ILPN F Y  +I G  + ++ 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +MK  G   +    ++ +N   +  R++EA  L +     G +P   +Y+ +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG F+A +  +A+   ++M E+    DVV Y V+I GL + GK  ++    + MR+ G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD+  +N +I  +C  G L  A  L  E+      PN+ T  IL+  +C  G ++    
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L N M   G  P+     A++D   K+    +A+++ +  +         +L   G ++ 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKS---RRADVILHMHD---------QLVGMGVKL- 539

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D ++  T++  +C  G+I +A  +   +   G L DIITYN+LI+G+C   ++  A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            ++  +G+ P+  TY  L+ GL      ++A  +  QM + G  P+   Y  L++
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 240/522 (45%), Gaps = 34/522 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  ++ GY K G   +A++   KM + +  P+V++Y  +++  F+     +AL ++ EM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N       +N L +SG+ E A ++  +M  RG+LP++  YT ++ G  +  + 
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+ +  +M +     D VAYN L+NG  KL +  E+ +      + G  P   +++ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+   +      A     +M    ++P+ +   ++++ L  AG+++  M LL+DM   G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP------NTHTFTILICGMCRNGM 393
            P    + A++          ++R   V +   D L       +  T+  LI   CR GM
Sbjct: 503 HPTPTTHKAVLDAS------SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +  A  +F  M   G    +  +NALI G C +  L+KA  +  +M           L++
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM-----------LTE 605

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G +   +  +   ++     A LI +A  ++ Q+ E G +P+  TY+ L++G  K+GN+ 
Sbjct: 606 GVSP--NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +KL+ E+  KG  P + TY  LI+   +  +   A  +  +M   G  P+ + Y  L+
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723

Query: 574 -TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             W    ++  L  SL   Y         E+ +  EE  +KG
Sbjct: 724 CGWYKLSKQPELNKSLKRSY-------QAEAKRLFEEMNEKG 758



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 12/376 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYNAVLNI 142
           Q + E  SG   VV+  + VLI+G +K+G  E   ESF   M++    PD   +N ++N 
Sbjct: 391 QEMTEKSSG-FDVVA--YNVLINGLFKLGKYES--ESFHTGMRQLGLAPDSATFNTMINA 445

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++     AL +  EM      PN +T ++L+  L  +G+ E  + +L++M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  V+    +  RAD    +  ++   G   D   YN L++ FC+L  +  A  + +
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G +  + +Y+ LI G   +    +A+A + +M  E + P+V  Y +++ GLS A 
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +K+A  L++ M+ERG+VP+   Y+ L+ G   +G + +   L  E+  +  +P T T+ 
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG---LCKAGELEKANLLFYKM 439
           +LI    +   +  A++L  +M+  G  P+   ++ LI G   L K  EL K+    Y+ 
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQA 745

Query: 440 EIGKNPTLFLRLSQGG 455
           E  +   LF  +++ G
Sbjct: 746 EAKR---LFEEMNEKG 758



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 228/506 (45%), Gaps = 29/506 (5%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E++S  +   + V    ++   + G  E+A E F  M      PD   Y ++++  F+  
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  EM + +   ++V +++LINGL K GK E +      M Q G+ P+  T+ 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+  C+      A +L  +MK  G  P+ +  N L+   C    +++ + LL      
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF P   ++  ++D   +++R D     + ++    ++ D+  Y  +I      G ++ A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +  DM  +GI+ D   YNALI G+C    L +A ++  ++      PN  T+ IL+ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +    ++ +A  L N+M++ G  P+   ++ L+ G  K G +++   L+ +M        
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM-------- 672

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              +++G   V    +   ++  +     + +A +++ ++   G  P+  TY+ LI G+ 
Sbjct: 673 ---ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 508 KVG---NINGALK---------LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           K+     +N +LK         LF+E+  KG  P   T   +   L +  ++ DA RI  
Sbjct: 728 KLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++ +           + + W  R RK
Sbjct: 788 KLYKKKTVQE---LLAGVLWESRERK 810



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 34/462 (7%)

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +I   V  + V+I G    G++  A++LL  M+  G  PD   YN L+ GFC +G L  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           + L  EI   +  PN  T+T LI   C++  ++DA  ++++M      P V  +  +++G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 423 LCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRVH---------------D 460
           LCK+G++E+A  +F +M E+G  P      TL   L + GN                  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 +++    AG+ + A  +   L E   +P+ +TY++LI+G CK+G++N    L +
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++ K + P+ + Y ++++G  +     +A  +  +M Q    P+  VY +L+    +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 581 KFSLAFSLWLQYLRDISGRD-DESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQL 635
           +  +A  L+    +++  R  +E+   I+ F+    + G +E A +   +M  +      
Sbjct: 312 QRGIALDLF----KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  + G  + G+  +A NI   + E  +     +   LI+GL K G  +       +
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE---SESFH 424

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           T      L P    +      + K+    +A  LL  MKS G
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 12/355 (3%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+ + +I+   K        + L+E++S  +   S    +L+      G+ EK ++    
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M      P    + AVL+ + + +   + L ++ ++V +    ++ T++ LI+   + G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A  +  +M  +GIL +  TY  +I G C  +   +A+ +  +M   G SP+   YN 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL G    R + EA  L+   ++ G VP   +Y  L+ G  +     E    Y +M  + 
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL------- 356
             P    Y V+I   ++  K+  A +L+ +M+ RGI P++  Y+ LI G+  L       
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELN 736

Query: 357 -----GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
                    +A+ L  E+ ++  +P  +T   +   + + G   DAQ++ NK+ K
Sbjct: 737 KSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 48/307 (15%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            ++ AV+    K    D+     D+L    V +    +  LIS + ++G   +A   F  
Sbjct: 507 TTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKD 566

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M       D+  YNA+++          A AV+ +M+     PN+ T+++L+ GLS +  
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A  ++++M +RG++PN  TY I++SG  +I    E  +L+ +M   G  P    YN 
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 244 LLNGFCKLRRVDEALALL------------------------------------RSFEKD 267
           L++ F K +++ +A  L+                                    RS++ +
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE 746

Query: 268 -----------GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
                      GF+P   + +C+   L +  +  +A     K++++K   + +L GV+  
Sbjct: 747 AKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTVQE-LLAGVLWE 805

Query: 317 GLSEAGK 323
                GK
Sbjct: 806 SRERKGK 812


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 304/679 (44%), Gaps = 83/679 (12%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F VLI GY + G+  +A+E    MK     PD+  YN ++N   +      A  +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +N  PN++T++ LI+   KS   E A+ M DEMT + ++P+  TYT +++GLC+  + +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F +M++ G  P+  +Y  L++   K   V EA  L       G    +  Y+ L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGLF+A   + A   ++ + EE + P+ V Y  +I G  + G V     LL +M E+ I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y++++ G+   GLL++A  +  ++ +R+ LPN   +  LI G  +      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M+  G   +  + ++ ++ L ++G +E+A+ LF  M           +S+G   + D
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM-----------MSRG--LLPD 366

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAES------------------------------ 490
           + +  +M++ +  AG    A+ I  ++ E                               
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 491 ----GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
               G  PD  T+N++IN +CK GN+  ALKL  E++  GL+P+S+T   L+  L     
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E    +   M   G  P+P  +K+++  S + R+  +   +  Q               
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQ--------------- 531

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                           L+ M  KL+   L+ Y   +   C+ G ++ A  +F  ++    
Sbjct: 532 ----------------LVGMGVKLD---LSTYNTLISTFCRLGMIRRATLVFKDMMGKGI 572

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   LIHG C   +L  A  V    L  G        N LL  L  ++  K+  A
Sbjct: 573 LADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE--A 630

Query: 727 YHLLCRMKSVGYDLDACLY 745
             L+ +MK  G   +A  Y
Sbjct: 631 AGLVNQMKERGLVPNATTY 649



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 234/475 (49%), Gaps = 14/475 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  L+ G +K G    A + F  + E    P+   Y+A+++   +         +  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + +  PN++ +S +++G +K G    A+ ++ +M QR ILPN F Y  +I G  + ++ 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +MK  G   +    ++ +N   +  R++EA  L +     G +P   +Y+ +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG F+A +  +A+   ++M E+    DVV Y V+I GL + GK  ++    + MR+ G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD+  +N +I  +C  G L  A  L  E+      PN+ T  IL+  +C  G ++    
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L N M   G  P+     A++D   K+    +A+++ +  +         +L   G ++ 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKS---RRADVILHMHD---------QLVGMGVKL- 539

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D ++  T++  +C  G+I +A  +   +   G L DIITYN+LI+G+C   ++  A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            ++  +G+ P+  TY  L+ GL      ++A  +  QM + G  P+   Y  L++
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 240/522 (45%), Gaps = 34/522 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  ++ GY K G   +A++   KM + +  P+V++Y  +++  F+     +AL ++ EM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N       +N L +SG+ E A ++  +M  RG+LP++  YT ++ G  +  + 
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+ +  +M +     D VAYN L+NG  KL +  E+ +      + G  P   +++ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+   +      A     +M    ++P+ +   ++++ L  AG+++  M LL+DM   G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP------NTHTFTILICGMCRNGM 393
            P    + A++          ++R   V +   D L       +  T+  LI   CR GM
Sbjct: 503 HPTPTTHKAVLDAS------SKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +  A  +F  M   G    +  +NALI G C +  L+KA  +  +M           L++
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM-----------LTE 605

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G +   +  +   ++     A LI +A  ++ Q+ E G +P+  TY+ L++G  K+GN+ 
Sbjct: 606 GVSP--NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +KL+ E+  KG  P + TY  LI+   +  +   A  +  +M   G  P+ + Y  L+
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723

Query: 574 T-WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             W    ++  L  SL   Y         E+ +  EE  +KG
Sbjct: 724 CGWYKLSKQPELNKSLKRSY-------QAEAKRLFEEMNEKG 758



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 186/376 (49%), Gaps = 12/376 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYNAVLNI 142
           Q + E  SG   VV+  + VLI+G +K+G  E   ESF   M++    PD   +N ++N 
Sbjct: 391 QEMTEKSSG-FDVVA--YNVLINGLFKLGKYES--ESFHTGMRQLGLAPDSATFNTMINA 445

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++     AL +  EM      PN +T ++L+  L  +G+ E  + +L++M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  V+    +  RAD    +  ++   G   D   YN L++ FC+L  +  A  + +
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G +  + +Y+ LI G   +    +A+A + +M  E + P+V  Y +++ GLS A 
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +K+A  L++ M+ERG+VP+   Y+ L+ G   +G + +   L  E+  +  +P T T+ 
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG---LCKAGELEKANLLFYKM 439
           +LI    +   +  A++L  +M+  G  P+   ++ LI G   L K  EL K+    Y+ 
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQA 745

Query: 440 EIGKNPTLFLRLSQGG 455
           E  +   LF  +++ G
Sbjct: 746 EAKR---LFEEMNEKG 758



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 221/482 (45%), Gaps = 26/482 (5%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E++S  +   + V    ++   + G  E+A E F  M      PD   Y ++++  F+  
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  EM + +   ++V +++LINGL K GK E +      M Q G+ P+  T+ 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+  C+      A +L  +MK  G  P+ +  N L+   C    +++ + LL      
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF P   ++  ++D   +++R D     + ++    ++ D+  Y  +I      G ++ A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +  DM  +GI+ D   YNALI G+C    L +A ++  ++      PN  T+ IL+ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +    ++ +A  L N+M++ G  P+   ++ L+ G  K G +++   L+ +M        
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM-------- 672

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              +++G   V    +   ++  +     + +A +++ ++   G  P+  TY+ LI G+ 
Sbjct: 673 ---ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 508 KVG---NINGALK---------LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           K+     +N +LK         LF+E+  KG  P   T   +   L +  ++ DA RI  
Sbjct: 728 KLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787

Query: 556 QM 557
           ++
Sbjct: 788 KL 789



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 34/462 (7%)

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +I   V  + V+I G    G++  A++LL  M+  G  PD   YN L+ GFC +G L  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           + L  EI   +  PN  T+T LI   C++  ++DA  ++++M      P V  +  +++G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 423 LCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRVH---------------D 460
           LCK+G++E+A  +F +M E+G  P      TL   L + GN                  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 +++    AG+ + A  +   L E   +P+ +TY++LI+G CK+G++N    L +
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++ K + P+ + Y ++++G  +     +A  +  +M Q    P+  VY +L+    +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 581 KFSLAFSLWLQYLRDISGRD-DESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQL 635
           +  +A  L+    +++  R  +E+   I+ F+    + G +E A +   +M  +      
Sbjct: 312 QRGIALDLF----KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  + G  + G+  +A NI   + E  +     +   LI+GL K G  +       +
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE---SESFH 424

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           T      L P    +      + K+    +A  LL  MKS G
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 160/355 (45%), Gaps = 12/355 (3%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+ + +I+   K        + L+E++S  +   S    +L+      G+ EK ++    
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M      P    + AVL+ + + +   + L ++ ++V +    ++ T++ LI+   + G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A  +  +M  +GIL +  TY  +I G C  +   +A+ +  +M   G SP+   YN 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL G    R + EA  L+   ++ G VP   +Y  L+ G  +     E    Y +M  + 
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL------- 356
             P    Y V+I   ++  K+  A +L+ +M+ RGI P++  Y+ LI G+  L       
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELN 736

Query: 357 -----GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
                    +A+ L  E+ ++  +P  +T   +   + + G   DAQ++ NK+ K
Sbjct: 737 KSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 124/289 (42%), Gaps = 47/289 (16%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            ++ AV+    K    D+     D+L    V +    +  LIS + ++G   +A   F  
Sbjct: 507 TTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKD 566

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M       D+  YNA+++          A AV+ +M+     PN+ T+++L+ GLS +  
Sbjct: 567 MMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARL 626

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A  ++++M +RG++PN  TY I++SG  +I    E  +L+ +M   G  P    YN 
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 244 LLNGFCKLRRVDEALALL------------------------------------RSFEKD 267
           L++ F K +++ +A  L+                                    RS++ +
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE 746

Query: 268 -----------GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
                      GF+P   + +C+   L +  +  +A     K++++K++
Sbjct: 747 AKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKVK 795


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/654 (25%), Positives = 299/654 (45%), Gaps = 81/654 (12%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFR-------FFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           LP L++ T     +K K+    F+       FF +  + +   +    + VI + ++ N 
Sbjct: 62  LPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNR 121

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK---ALESFGKMKEFDCQPDVYI 135
            D+      ++    + +    F +LI  +    DC K   +L +FGK+ +   QPDV  
Sbjct: 122 PDVAISLYRKMEIRRIPLNIYSFNILIKCFC---DCHKLSFSLSTFGKLTKLGFQPDVVT 178

Query: 136 YNAVLNIAFRKQLFLLALAVY----------YEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
           +N +L+    +     ALA++           +MV++   P ++TF+ LINGL   G+  
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVL 238

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A  ++++M  +G+  +  TY  +++G+C++     A  L  KM+++   PD V Y+A++
Sbjct: 239 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 298

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +  CK     +A  L     + G  P + +Y+C+IDG     R+ +A    R M E +I 
Sbjct: 299 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 358

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV+ +  +I    + GK+ +A KL  +M  R I PDT  YN++I GFC     D A+ +
Sbjct: 359 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 418

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
               +   + P+  TF  +I   CR   VD+  +L  ++ + G   +   +N LI G C+
Sbjct: 419 ----FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 474

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
              L  A  LF +M                                              
Sbjct: 475 VDNLNAAQDLFQEM---------------------------------------------- 488

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
                G  PD IT N L+ GFC+   +  AL+LF+ +Q+  +  D+V Y  +I+G+ +  
Sbjct: 489 --ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 546

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + ++A+ +F  +P +G  P    Y  +++  C +   S A ++    ++D     D S  
Sbjct: 547 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTY 605

Query: 606 S--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG-LCQDGQVKEALN 656
           +  I   L+ GE++ +I+ + EM  + N F    +TI ++  L  DG++ ++ +
Sbjct: 606 NTLIRGCLKAGEIDKSIELISEM--RSNGFSGDAFTIKMVADLITDGRLDKSFS 657



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 260/585 (44%), Gaps = 64/585 (10%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI   D M +            VI    ++NR D A  L+ KM+      +  ++N L+ 
Sbjct: 90  AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC   ++  +L+      K GF P + +++ L+ GL    R  EA A            
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA------------ 197

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
              L+G M+    E G       L   M E G+ P    +N LI G C  G + +A +L 
Sbjct: 198 ---LFGYMV----ETGS------LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +    +  T+  ++ GMC+ G    A  L +KME+    P V +++A+ID LCK 
Sbjct: 245 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 304

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G    A  LF +M E G  P +F              +   M++ +C+ G    A ++L 
Sbjct: 305 GHHSDAQYLFSEMLEKGIAPNVF--------------TYNCMIDGFCSFGRWSDAQRLLR 350

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E    PD++T+N+LI+   K G +  A KL  E+  + + PD+VTY ++I G  + +
Sbjct: 351 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 410

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F  M     +P    + +++   CR ++        +Q LR+IS R   +  
Sbjct: 411 RFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG----MQLLREISRRGLVANT 462

Query: 606 SIEEFLQKGEVE----NAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVKEALNI 657
           +    L  G  E    NA Q L +   ++    + P TI     L G C++ +++EAL +
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQ---EMISHGVCPDTITCNILLYGFCENEKLEEALEL 519

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F V+   K  +   +   +IHG+CK   +D A D+F     +G  + P V  Y +    F
Sbjct: 520 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG--VEPDVQTYNVMISGF 577

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
              +    A  L  +MK  G++ D   Y    +L+ G     E++
Sbjct: 578 CGKSAISDANVLFHKMKDNGHEPDNSTY---NTLIRGCLKAGEID 619


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 233/457 (50%), Gaps = 13/457 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A    GK+ +   +PD   +N ++N    +     A+ +   MV+  C PN+VT++ ++N
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G+ KSG T +A+ +L +M +R +  + FTY+ +I  LC+    D A  LF +M+  G   
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             V YN+L+ G CK  + ++ + LL+       +P + +++ LID   +  +  EA   Y
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           ++M  + I P+ + Y  ++ G     ++ +A  +L  M      PD   + +LIKG+C +
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D+   L  +I KR  + NT T++IL+ G C++G ++ A++LF +M   G  P V  +
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
             L+DGLC  G+LEKA  +F  ++  K     + L        D      ++E  C  G 
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSK-----MNL--------DIVMYTIIIEGMCKGGK 465

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +  A+ +   L   G  P+++TY  +I+G CK G+++ A  L ++++  G  P+  TY T
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           LI    R      + ++  +M   G +   +  K ++
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 227/448 (50%), Gaps = 15/448 (3%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           ++Y  N ++N   R      A +V  +++KL   P+  TF+ LINGL    K   A+ ++
Sbjct: 99  NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLV 158

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             M + G  PN  TY  +++G+C+      A  L  KM +     D   Y+ +++  C+ 
Sbjct: 159 ARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRD 218

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
             +D A++L +  E  G    L +Y+ L+ GL +A ++++     + M   KI P+V+ +
Sbjct: 219 GCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            V+I    + GK+++A +L  +M  +GI P+T  YN+L+ G+C    L +A ++   + +
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
            +  P+  TFT LI G C+   VD+  KLF K+ K G   +   ++ L+ G C++G+LE 
Sbjct: 339 NNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEI 398

Query: 432 ANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  LF +M  +G  P              D  +   +++  C  G + KA +I   L +S
Sbjct: 399 AEELFQEMVSLGVLP--------------DVMTYGILLDGLCDNGKLEKALEIFEDLQKS 444

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
               DI+ Y  +I G CK G +  A  LF  L  KG++P+ +TY  +I+GL +     +A
Sbjct: 445 KMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 504

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             +  +M ++G  P+   Y +L+    R
Sbjct: 505 NILLRKMEEDGNEPNDCTYNTLIRAHLR 532



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 219/439 (49%), Gaps = 48/439 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +++G  K GD   AL+   KM E + + DV+ Y+ +++   R      A++++ EM    
Sbjct: 176 IVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 235

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              ++VT++ L+ GL K+GK    +++L +MT R I+PN  T+ ++I    +  +  EA 
Sbjct: 236 IKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEAN 295

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L+ +M   G SP+ + YN+L++G+C   R+ EA  +L    ++   P + +++ LI G 
Sbjct: 296 ELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGY 355

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + KR DE    +RK+ +  +  + V Y ++++G  ++GK++ A +L  +M   G++PD 
Sbjct: 356 CKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDV 415

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  L+ G CD G L++A  +  ++ K     +   +TI+I GMC+ G V+DA  LF  
Sbjct: 416 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCS 475

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           +   G  P+V  +  +I GLCK G L +AN+L  KME                       
Sbjct: 476 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME----------------------- 512

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
                                    E GN P+  TYN+LI    + G++  + KL +E++
Sbjct: 513 -------------------------EDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 547

Query: 524 LKGLRPDSVTYGTLINGLQ 542
             G   D+ +   +I+ L 
Sbjct: 548 SCGFSADASSIKMVIDMLS 566



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 243/499 (48%), Gaps = 25/499 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++ EM++   LP++V FS   +G++ + +  + +    +M   GI  N +T  I+I+
Sbjct: 49  AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  +   AY +  K+   G  PD   +N L+NG C   +V EA+ L+    ++G  P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +++G+ ++     A    RKM E  ++ DV  Y  +I  L   G +  A+ L 
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  +GI      YN+L+ G C  G  +    L  ++  R  +PN  TF +LI    + 
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------------ 439
           G + +A +L+ +M   G  P+   +N+L+DG C    L +AN +   M            
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTF 348

Query: 440 -----------EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
                       + +   LF ++S+ G  V +  +   +V+ +C +G +  A ++  ++ 
Sbjct: 349 TSLIKGYCKVKRVDEGMKLFRKISKRG-LVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G LPD++TY  L++G C  G +  AL++F++LQ   +  D V Y  +I G+ +  + E
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-I 607
           DA+ +F  +P  G  P+   Y  +++  C++   S A  L  +   D +  +D +  + I
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527

Query: 608 EEFLQKGEVENAIQGLLEM 626
              L+ G++  + + + EM
Sbjct: 528 RAHLRDGDLTASAKLIEEM 546



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 263/566 (46%), Gaps = 61/566 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + AI +  EM +   LP+   ++   SG+    + +       KM+ +G + +    N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N FC+  +   A ++L    K G+ P   +++ LI+GL    +  EA     +M E 
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +P+VV Y  ++ G+ ++G    A+ LL  M ER +  D + Y+ +I   C  G +D A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  E+  +    +  T+  L+ G+C+ G  +D  +L   M      P+V  FN LID 
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             K G+L++AN L+ +M   G +P              +  +  ++++ YC    + +A 
Sbjct: 285 FVKEGKLQEANELYKEMITKGISP--------------NTITYNSLMDGYCMQNRLSEAN 330

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  +  +   PDI+T+ SLI G+CKV  ++  +KLF+++  +GL  ++VTY  L+ G 
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  + E A  +F +M   G  P    Y  L+   C   K   A  ++            
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF------------ 438

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  E LQK ++               +  +  YTI + G+C+ G+V++A N+F  L
Sbjct: 439 -------EDLQKSKM---------------NLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476

Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
             CK +   P+ +    +I GLCK+G L  A  +     ++G    P  C Y  L+R+ L
Sbjct: 477 -PCKGV--KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN--EPNDCTYNTLIRAHL 531

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
             +D     +  L+  MKS G+  DA
Sbjct: 532 --RDGDLTASAKLIEEMKSCGFSADA 555



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 236/520 (45%), Gaps = 26/520 (5%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           SG S   V Y   L       + D+A+ L +   +   +P L  +S    G+   K+++ 
Sbjct: 24  SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
              + +KM    I  ++    +MI       K   A  +L  + + G  PDT  +N LI 
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C    + +A  L   + +    PN  T+  ++ G+C++G    A  L  KM++     
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  ++ +ID LC+ G ++ A  LF +ME  G   +L               +  ++V  
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSL--------------VTYNSLVGG 249

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C AG  +   ++L  +     +P++IT+N LI+ F K G +  A +L+KE+  KG+ P+
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           ++TY +L++G    +R  +A  +   M +N C+P    + SL+   C+ ++      L+ 
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLF- 368

Query: 591 QYLRDISGRD---DESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
              R IS R    +    SI  + F Q G++E A +   EM        +  Y I L GL
Sbjct: 369 ---RKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
           C +G++++AL IF  L + K  +       +I G+CK G ++ A ++F      G  ++P
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG--VKP 483

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            V  Y +      K      A  LL +M+  G + + C Y
Sbjct: 484 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 169/360 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L +    D       E+ +  +      +  L+ G  K G     ++    M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  +N ++++  ++     A  +Y EM+     PN +T++ L++G     +   
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  MLD M +    P+  T+T +I G C++ R DE  +LF K+   G   + V Y+ L+ 
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+  +++ A  L +     G +P + +Y  L+DGL    + ++A   +  + + K+  
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+V+Y ++I G+ + GKV+DA  L   +  +G+ P+   Y  +I G C  G L +A  L 
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +  + PN  T+  LI    R+G +  + KL  +M+  G          +ID L  A
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 158/308 (51%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + ++++  L K   ++   Q L ++ S  +      F VLI  + K G  ++A E +
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M      P+   YN++++    +     A  +   MV+ NC P+IVTF+ LI G  K 
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + +  +K+  ++++RG++ N  TY+I++ G CQ  + + A  LF +M   G  PD + Y
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             LL+G C   ++++AL +    +K      +  Y+ +I+G+ +  + ++A+  +  +  
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + ++P+V+ Y VMI GL + G + +A  LL  M E G  P+   YN LI+     G L  
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTA 538

Query: 362 ARSLQVEI 369
           +  L  E+
Sbjct: 539 SAKLIEEM 546



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 140/296 (47%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           G +       RK + +  + + +I + +K        +   E+ +  +S  +  +  L+ 
Sbjct: 259 GVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           GY       +A      M   +C PD+  + +++    + +     + ++ ++ K   + 
Sbjct: 319 GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N VT+S+L+ G  +SGK E+A ++  EM   G+LP+  TY I++ GLC   + ++A  +F
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             ++ S  + D V Y  ++ G CK  +V++A  L  S    G  P + +Y+ +I GL + 
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
               EA    RKM E+  EP+   Y  +IR     G +  + KL+ +M+  G   D
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 216/424 (50%), Gaps = 21/424 (4%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  T + LI  LS SG+T  A ++L         P+   Y  +++G C   + D A RL
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M      PD   YN L+ G C   R   ALA+L    +   VP + +Y+ L++   +
Sbjct: 149 VAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 205

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
              Y +A     +M ++   PD+V Y V++ G+ + G+V DA++ L ++   G  P+T  
Sbjct: 206 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN ++KG C     + A  L  E+ ++   PN  TF +LI  +CR G+V+ A ++  ++ 
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K GC P+   +N L+   CK  +++KA               FL L        D  S  
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKA-------------MAFLDLMVSRGCYPDIVSYN 372

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++   C +G +  A ++L QL + G  P +I+YN++I+G  K G    AL+L  E+  K
Sbjct: 373 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 432

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+PD +TY T+  GL R DR EDA R FG++   G  P+  +Y +++   C+RR+   A
Sbjct: 433 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 492

Query: 586 FSLW 589
             L+
Sbjct: 493 IDLF 496



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 237/486 (48%), Gaps = 64/486 (13%)

Query: 116 KALESFGKMKEF-----DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           K L + G+  E       C PDV  YNA++           A  +  EM      P+  T
Sbjct: 104 KKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYT 160

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI GL   G+T  A+ +LDEM +R  +P+  TYTI++   C+ +   +A +L  +M+
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D GC+PD V YN ++NG C+  RVD+A+  L++    G  P   SY+ ++ GL  A+R++
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A     +M ++   P+VV + ++I  L   G V+ A+++L  + + G  P++  YN L+
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC    +D+A +    +  R   P+  ++  L+  +CR+G VD A +L ++++  GC 
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 400

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P +  +N +IDGL KAG+ ++A                                      
Sbjct: 401 PVLISYNTVIDGLTKAGKTKEA-------------------------------------- 422

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
                      ++L ++   G  PDIITY+++  G C+   I  A++ F ++Q  G+RP+
Sbjct: 423 ----------LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPN 472

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +V Y  +I GL +      A  +F  M  NGC P+ + Y  L+          LA+   +
Sbjct: 473 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE--------GLAYEGLI 524

Query: 591 QYLRDI 596
           +  RD+
Sbjct: 525 KEARDL 530



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 196/405 (48%), Gaps = 18/405 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G    G    AL    +M    C PDV  Y  +L    ++  +  A+ +  EM
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++++NG+ + G+ + AI+ L  +   G  PN  +Y IV+ GLC   R 
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 279

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M   GC P+ V +N L++  C+   V+ AL +L    K G  P   SY+ L
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +    + K+ D+A A+   M      PD+V Y  ++  L  +G+V  A++LL  ++++G 
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN +I G    G   +A  L  E+  +   P+  T++ +  G+CR   ++DA +
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            F K++  G  P+  ++NA+I GLCK  E   A  LF  M              G   + 
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-------------IGNGCMP 506

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           ++++   ++E     GLI +A  +L +L   G     +   SLIN
Sbjct: 507 NESTYTILIEGLAYEGLIKEARDLLDELCSRG-----VVRKSLIN 546



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 182/353 (51%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R+ +    + + ++    K +G+    + LDE+R    +     + V+++G  + G  +
Sbjct: 186 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 245

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    +  + C+P+   YN VL      + +  A  +  EM +  C PN+VTF++LI
Sbjct: 246 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 305

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + L + G  E A+++L+++ + G  PN  +Y  ++   C+  + D+A      M   GC 
Sbjct: 306 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 365

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V+YN LL   C+   VD A+ LL   +  G  P L SY+ +IDGL +A +  EA   
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 425

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + ++PD++ Y  +  GL    +++DA++    +++ GI P+T  YNA+I G C 
Sbjct: 426 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 485

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
                 A  L   +     +PN  T+TILI G+   G++ +A+ L +++   G
Sbjct: 486 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 224/473 (47%), Gaps = 42/473 (8%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +DEAL L+ S  +    P  G+ + LI  L  + R  EA    R++      PDV+ Y  
Sbjct: 81  LDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEA----RRVLA-ACGPDVMAYNA 131

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+ G   AG++  A +L+++M    + PD Y YN LI+G C  G    A ++  E+ +R 
Sbjct: 132 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 188

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA- 432
            +P+  T+TIL+   C+      A KL ++M   GC P +  +N +++G+C+ G ++ A 
Sbjct: 189 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 248

Query: 433 ----NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
               NL  Y  E                   +  S   +++  CTA     A +++ ++ 
Sbjct: 249 EFLKNLPSYGCE------------------PNTVSYNIVLKGLCTAERWEDAEELMGEMG 290

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P+++T+N LI+  C+ G +  AL++ +++   G  P+S++Y  L++   +  + +
Sbjct: 291 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 350

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            A      M   GC P    Y +L+T  CR  +  +A  L  Q           S  ++ 
Sbjct: 351 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 410

Query: 609 EFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + L K G+ + A++ L EM  K     +  Y+    GLC++ ++++A+  F    + + +
Sbjct: 411 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG---KVQDM 467

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
              P+ V    +I GLCKR     A+D+F Y + NG +        L+  L +
Sbjct: 468 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 520



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 131/249 (52%), Gaps = 4/249 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS L +    +   + L+++     +  S  +  L+  + K    +KA+     M    
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 363

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PD+  YN +L    R     +A+ + +++    C P +++++ +I+GL+K+GKT+ A+
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L+EM  +G+ P+  TY+ + +GLC+ +R ++A R F K++D G  P+ V YNA++ G 
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK R    A+ L      +G +P   +Y+ LI+GL     Y+      R + +E     V
Sbjct: 484 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA----YEGLIKEARDLLDELCSRGV 539

Query: 309 VLYGVMIRG 317
           V   ++ +G
Sbjct: 540 VRKSLINKG 548



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 13/257 (5%)

Query: 4   TLNEVLTILDTVTPIEPALEPL--LP-------FLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           T N +++ L     +EPALE L  +P        LS   +     K K       F    
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
             R       S + +++ L +    D+  + L +L+    + V   +  +I G  K G  
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +M     QPD+  Y+ +     R+     A+  + ++  +   PN V ++ +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I GL K  +T  AI +   M   G +PN+ TYTI+I GL       EA  L     D  C
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL----DELC 535

Query: 235 SPDFVAYNALLNGFCKL 251
           S   V  + +  G  +L
Sbjct: 536 SRGVVRKSLINKGAIRL 552


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 170/629 (27%), Positives = 295/629 (46%), Gaps = 81/629 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQL---FLLALA- 154
           +F  L+  Y    D   A +   +M    C P   +YN  + +I   ++L    LLALA 
Sbjct: 346 LFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAE 405

Query: 155 -VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            VY EM+  +C+ N V  +     L   GK + A +++  M ++G +P+  TY+ VI+ L
Sbjct: 406 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFL 465

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  + ++A+ LF +MK  G  PD   Y  L++ FCK+  +++A +     E  G  P +
Sbjct: 466 CEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+    + K+  +A   + +M +    P+ + Y  ++ GL +AG+ + A ++ + 
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARS-LQVEIWKRDSL-PNTHTFTILICGMCRN 391
           M                     +G  D   S    E    DS+ PN  T+  LI G+C+ 
Sbjct: 586 M---------------------IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKA 624

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             V DAQ+L + M   GC P+  +++ALIDG CK G+L+ A  +F++M + G  PT    
Sbjct: 625 HKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPT---- 680

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                  VH   SL   ++       +  A K+L Q+ ES   P+++TY ++I+G C++G
Sbjct: 681 -------VHTYTSL---IDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIG 730

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               ALKL   ++ +G  P+ VTY +LI+GL +  + + + ++F QM   GC P+   Y+
Sbjct: 731 ECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYR 790

Query: 571 SLMTWSCRRRKFSLAFSL--------WLQYLRD----ISGRDDESMKS------------ 606
            L+   C       A SL        W +Y++     + G   + + S            
Sbjct: 791 VLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGM 850

Query: 607 ----------IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                     I+ F + G +E A++    ++E+   LN      YT  +  LC   Q+++
Sbjct: 851 VSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEK 910

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           A  ++S +     +    + + LI GL K
Sbjct: 911 AFELYSEITRKGVVPELSAFICLIKGLIK 939



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 181/743 (24%), Positives = 322/743 (43%), Gaps = 119/743 (16%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT-- 85
           FL+   V +V+   + P++  RFF+WA   +R   ++   A  + L +   FD   +T  
Sbjct: 101 FLNDAVVVAVLRSVRTPELCVRFFLWA---ERQVGYSHTGACYNALAEVLHFDDRARTTE 157

Query: 86  --LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV---- 139
             L E+   +  V+  +  V++    + G   KALE  G++K+F  +P    YNA+    
Sbjct: 158 RLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVL 217

Query: 140 -----LNIAFRKQLFLLALAVYYEMVKLNCLP-----------------------NIVTF 171
                +++ FR Q  +  L    +   + C                         + V  
Sbjct: 218 ATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLC 277

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + +I+GL ++   + AI  L  M     +PN  TY  +++G  +  +     R+   M +
Sbjct: 278 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMN 337

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY--------------- 276
            GC+P+   +N+L++ +C  R    A  LL      G  P    Y               
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPS 397

Query: 277 -----------------SCLIDGLFRAK---------RYDEAYAWYRKMFEEKIEPDVVL 310
                            SC+++ +  A          ++D+A+   + M  +   PD   
Sbjct: 398 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST 457

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I  L EA KV+ A  L  +M+  G++PD Y Y  LI  FC +GL++QARS   E+ 
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEME 517

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                P+  T+T L+    +   V  A  +F++M  AGC P+   ++AL+DGLCKAGE +
Sbjct: 518 SVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQ 577

Query: 431 KANLLFYKMEIGKNPTL----FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           KA  ++ KM IG +  +    +       +   +  +   +++  C A  +  A ++L  
Sbjct: 578 KACEVYAKM-IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDV 636

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           ++ +G  P+ I Y++LI+GFCKVG ++ A ++F  +   G  P   TY +LI+ + +  R
Sbjct: 637 MSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRR 696

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            + A ++  QM ++ CTP+   Y +++   CR                            
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR---------------------------- 728

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                  GE + A++ L  M+ +  +  +  YT  + GL + G+V  +L +F+ ++    
Sbjct: 729 ------IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 667 IVTPPSCVKLIHGLCKRGYLDLA 689
                +   LI+  C  G LD A
Sbjct: 783 APNYVTYRVLINHCCAAGLLDEA 805



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 228/486 (46%), Gaps = 39/486 (8%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           EKA   F +MK     PDVY Y  +++   +  L   A + + EM  + C P++VT++ L
Sbjct: 472 EKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTAL 531

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM----- 229
           ++   K+ +   A  +   M   G  PN  TY+ ++ GLC+   + +A  ++ KM     
Sbjct: 532 LHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSD 591

Query: 230 -----------KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
                           +P+ V Y AL++G CK  +V +A  LL     +G  P    Y  
Sbjct: 592 NVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDA 651

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LIDG  +  + D A   + +M +    P V  Y  +I  + +  ++  A+K+LS M E  
Sbjct: 652 LIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS 711

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+   Y A+I G C +G   +A  L   + KR   PN  T+T LI G+ ++G VD + 
Sbjct: 712 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSL 771

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL---FLRLSQGG 455
           +LF +M   GC P+   +  LI+  C AG L++A+ L  +M+    P     +  + QG 
Sbjct: 772 QLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF 831

Query: 456 NR-------------VHDKASLQT----MVEQYCTAGLIHKA---YKILMQLAESGNLPD 495
           ++              H   S+      +++ +  AG + KA   +K +M+++ S N+  
Sbjct: 832 SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITS 891

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TY SLI   C    +  A +L+ E+  KG+ P+   +  LI GL +V++  +A ++  
Sbjct: 892 KDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCY 951

Query: 556 QMPQNG 561
            M   G
Sbjct: 952 SMCDEG 957



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 211/535 (39%), Gaps = 59/535 (11%)

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           +++   C+     +A     ++KD G  P    YNAL+       ++D    + +   + 
Sbjct: 177 VIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL 236

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF     +  C    L +  R+ +A     +   E  + D VL   MI GL EA    +A
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWSDALVMIER---EDFKLDTVLCTQMISGLMEASLFDEA 293

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           +  L  MR    +P+   Y  L+ GF     L   + +   +      PN   F  L+  
Sbjct: 294 ISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHS 353

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK---- 443
            C       A KL N+M   GC P   ++N  I  +C   EL   +LL    ++ +    
Sbjct: 354 YCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLA 413

Query: 444 --------NPTLFLRLSQGGNR----------------VHDKASLQTMVEQYCTAGLIHK 479
                   N   F R   G  +                V D ++   ++   C A  + K
Sbjct: 414 SSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEK 473

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A+ +  ++   G +PD+ TY  LI+ FCKVG I  A   F E++  G  P  VTY  L++
Sbjct: 474 AFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLH 533

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
              +  +   A  IF +M   GC P+   Y +L+   C+  +   A  +   Y + I   
Sbjct: 534 AYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV---YAKMIGTS 590

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           D+       +F  +GE  ++I              +  Y   + GLC+  +V +A  +  
Sbjct: 591 DNVG----SDFYFEGEHTDSIAP-----------NVVTYGALIDGLCKAHKVVDAQELLD 635

Query: 660 VL----VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V+     E   I+       LI G CK G LD A +VF    K G++  P V  Y
Sbjct: 636 VMSSNGCEPNHIIYDA----LIDGFCKVGKLDNAQEVFFRMSKCGYL--PTVHTY 684



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 36/290 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F   +K   L +  + +++I  + K    DL  + L ++   + +     +  +I G  +
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           +G+C+KAL+    M++  C P+V  Y ++++   +     ++L ++ +M+   C PN VT
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQ---------------------------------R 197
           + +LIN    +G  + A  +L EM Q                                  
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESH 848

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA---YNALLNGFCKLRRV 254
           G++     Y ++I    +  R ++A  L  +M +   S +  +   Y +L+   C   ++
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQL 908

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++A  L     + G VP L ++ CLI GL +  +++EA      M +E +
Sbjct: 909 EKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 173/646 (26%), Positives = 302/646 (46%), Gaps = 36/646 (5%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +L+ G+ ++G  +        +       DV  +N +++   +     LAL +   M K 
Sbjct: 117 ILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKF----------------- 204
             L +IV+++ LING  K G+ + A  +L E+++ RG+  + F                 
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 205 ---TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
              TYT +IS  C+ +  +EA  L+ +M  +G  PD V Y++++NG CK  R+ EA  LL
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           R  +K G  P   +Y+ LID LF+A    EA+A   ++    +  D+V+   ++ GL ++
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            K K+A  +   + +  ++P++  Y ALI G+C +G +++  SL  E+ ++   PN  T+
Sbjct: 357 SKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITY 416

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           + +I G  + G++D+A  +  KM      P+  ++  LIDG CKAG+ E A  L+ +M++
Sbjct: 417 SSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKL 476

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                        G +V++      +V        + +A ++L  +   G L D + Y S
Sbjct: 477 ------------SGLKVNN-VLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTS 523

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L++GF K G  + AL + +E+  K +  D VTY  LINGL    + E A  ++  M + G
Sbjct: 524 LMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMG 582

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAI 620
             P+ A Y  ++   C++ +   A  LW +     I          +    + GE+E A+
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAM 642

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
             L EM        L  + + L    + G+    L +   LV+    +   +   LI   
Sbjct: 643 NVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVF 702

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           C+      A  V  Y +++GF+      N L+R    S   KK  A
Sbjct: 703 CRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALA 748



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 248/539 (46%), Gaps = 64/539 (11%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G +K    ++A + F  + + +  P+   Y A+++   +        ++  EM + 
Sbjct: 348 TLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK 407

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           +  PN++T+S +ING +K G  + AI ++ +M  + I+PN + Y I+I G C+  + + A
Sbjct: 408 HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIA 467

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L+ +MK SG   + V ++ L+N   + +R+DEA  LL+     G +    +Y+ L+DG
Sbjct: 468 TDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDG 527

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            F+A +   A     +M E+ I  DVV Y V+I GL E GK  +A  + S M E G+ P+
Sbjct: 528 FFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPN 586

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +IK +C  G LD A  L  E+     +P++ T   L+ G+   G ++ A  + N
Sbjct: 587 QATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLN 646

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKAN-------------------------LLFY 437
           +M   G  P++ +   L++   K+G   KAN                         ++F 
Sbjct: 647 EMSVMGIHPNLVIHRVLLNASSKSG---KANAVLQMHEQLVDMGLKINQEAYNNLIVVFC 703

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           ++ + K  T  L+       V D  +   ++  YC +  + KA     Q+   G  P+I+
Sbjct: 704 RLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIV 763

Query: 498 TYN-----------------------------------SLINGFCKVGNINGALKLFKEL 522
           TYN                                   +LI+G+ K+GN   +++L+ E+
Sbjct: 764 TYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEM 823

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
             +G  P + TY  LI+   +V + + A  +  +M   G  PS + Y  L+   C   K
Sbjct: 824 VAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 236/477 (49%), Gaps = 14/477 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  +  LI GY KVGD E+      +M+E    P+V  Y++++N   +K +   A+ V  
Sbjct: 378 SITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMK 437

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M+  N +PN   +++LI+G  K+GK E+A  + +EM   G+  N   + ++++ L +  
Sbjct: 438 KMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGK 497

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R DEA  L   +   G   D V Y +L++GF K  +   AL ++    +      + +Y+
Sbjct: 498 RMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYN 557

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI+GL    +Y EA + Y  M E  + P+   Y +MI+   + G++ +A++L ++M+  
Sbjct: 558 VLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSH 616

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I+P +   N L+ G  + G +++A ++  E+      PN     +L+    ++G  +  
Sbjct: 617 KIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAV 676

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            ++  ++   G   +   +N LI             ++F ++ + K  T  L+       
Sbjct: 677 LQMHEQLVDMGLKINQEAYNNLI-------------VVFCRLRMTKKATSVLKYMIRDGF 723

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           V D  +   ++  YC +  + KA     Q+   G  P+I+TYN L+ G    G +    +
Sbjct: 724 VADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDE 783

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           LF +++  GL PD+ TY TLI+G  ++  ++++ R++ +M   G  P  + Y  L++
Sbjct: 784 LFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLIS 840



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 150/635 (23%), Positives = 301/635 (47%), Gaps = 53/635 (8%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+VY +N +++   +    +LAL +   +  ++   + VT++ +I G  + G    A   
Sbjct: 43  PNVYTHNVLVHAWCKMGNLILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGF 99

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M ++    +  T  I++ G C+I  A    R+   +   G   D + +N L++G+CK
Sbjct: 100 LSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCK 159

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              +  AL L+    K+G +  + SY+ LI+G  +   YD+A +   ++ E +   D V 
Sbjct: 160 AGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVF 219

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + +      +  K  D + L +D+           Y  +I  +C    L++AR+L  E+ 
Sbjct: 220 FNI-----DDRIKKDDNLNLEADL---------ITYTTIISTYCKQHGLEEARALYEEMI 265

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
               LP+  T++ ++ G+C++G + +AQ+L  +M+K G  P+   +  LID L KAG   
Sbjct: 266 INGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAW 325

Query: 431 KA-----------------------NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           +A                       + LF   +  +   +F  LS+  N + +  +   +
Sbjct: 326 EAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSK-LNLIPNSITYTAL 384

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ YC  G + +   +L ++ E    P++ITY+S+ING+ K G ++ A+ + K++  + +
Sbjct: 385 IDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNI 444

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P++  Y  LI+G  +  ++E A  ++ +M  +G   +  ++  L+    R ++   A  
Sbjct: 445 IPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEE 504

Query: 588 LWLQYLRDISGR----DDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
           L    L+D++ R    D  +  S+ + F + G+   A+  + EM  K   F +  Y + +
Sbjct: 505 L----LKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLI 560

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GL + G+  EA +++S ++E        +   +I   CK+G LD A++++     +  +
Sbjct: 561 NGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIM 619

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
                CN L+  L  + + +K  A ++L  M  +G
Sbjct: 620 PSSITCNTLVVGLSEAGEIEK--AMNVLNEMSVMG 652



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 173/325 (53%), Gaps = 1/325 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI+G  + G  E A   +  M E    P+   YN ++    ++     AL ++ EM
Sbjct: 555 TYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM 613

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P+ +T + L+ GLS++G+ E A+ +L+EM+  GI PN   + ++++   +  +A
Sbjct: 614 KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKA 673

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +   ++  ++ D G   +  AYN L+  FC+LR   +A ++L+   +DGFV    +Y+ L
Sbjct: 674 NAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNAL 733

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G   +    +A A Y +M  E + P++V Y +++ GL  AG + +  +L   M+E G+
Sbjct: 734 IRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGL 793

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y+ LI G+  +G   ++  L  E+  +  +P T T+ +LI    + G +D A++
Sbjct: 794 NPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARE 853

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLC 424
           L N+M+  G  PS   ++ LI G C
Sbjct: 854 LLNEMQVRGVPPSSSTYDILICGWC 878



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 218/509 (42%), Gaps = 47/509 (9%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M +  I+P    +  +I          +   ++ +M  S   P+   +N L++ +CK+  
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +  AL LLR+ +                                      +E D V Y  
Sbjct: 61  LILALDLLRNVD--------------------------------------VEVDTVTYNT 82

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A   LS M ++    DT   N L+KGFC +GL      +   +    
Sbjct: 83  VIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGG 142

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           +  +   F  LI G C+ G +  A  L  +M K G    +  +N LI+G CK GE +KA 
Sbjct: 143 TCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAK 202

Query: 434 LLFYKMEIG---KNPTLF-----LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            L +++      K+   F     ++     N   D  +  T++  YC    + +A  +  
Sbjct: 203 SLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++  +G LPD++TY+S++NG CK G ++ A +L +E++  G+ P+ V Y TLI+ L +  
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG 322

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESM 604
              +AF    Q+   G T    +  +L+    +  K   A  ++    + ++        
Sbjct: 323 SAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYT 382

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             I+ + + G++E     L EM+ K  +  +  Y+  + G  + G + EA+N+   +++ 
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             I        LI G CK G  ++A D++
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLY 471



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 16/358 (4%)

Query: 63  FASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            A N A  ++++K        D   +  +E++S  +   S     L+ G  + G+ EKA+
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAM 642

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
               +M      P++ I+  +LN + +       L ++ ++V +    N   ++ LI   
Sbjct: 643 NVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVF 702

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            +   T+ A  +L  M + G + +  TY  +I G C+ +   +A   + +M + G SP+ 
Sbjct: 703 CRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNI 762

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN LL G      + E   L    +++G  P   +Y  LI G  +     E+   Y +
Sbjct: 763 VTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCE 822

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   P    Y V+I   ++ GK+  A +LL++M+ RG+ P +  Y+ LI G+C+L  
Sbjct: 823 MVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882

Query: 359 ---LDQ---------ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
              LD+         A++L  E+  +  +P   T   +     R G + DA+KL  ++
Sbjct: 883 HPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/727 (23%), Positives = 344/727 (47%), Gaps = 29/727 (3%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-FASNSAVISMLLKPNGFDLYWQ 84
           LP  +   + + +++++  +  FR  I A +  + R  F++ + +I  L +    +   +
Sbjct: 139 LPNPACAALVATLVRSRRLEDAFRV-IGAMRHLKFRPPFSAYTVLIGALAEARQPERALE 197

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            L +++     V   +F  L+    + G  E AL    ++K    +PD+ +YN  ++   
Sbjct: 198 LLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFG 257

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +     +A   ++E+      P+ V+++ ++  L K+G+   A ++  +M     +P  +
Sbjct: 258 KAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAY 317

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I G     R D+AY+L  ++++ GC P  V++N++L    K R+VDEAL L    
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           +KD   P + +Y+ +ID L  A R +EAY    +M    + P+++   +M+  L +A ++
Sbjct: 378 KKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQL 436

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           ++A ++     ERG  P++  Y +LI G    G +D A  L  ++       N   +T L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGK 443
           I     +G  +D  K++ +M + G  P + + N  +D + KAGE+EK   +F  M+  G 
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              D  S   ++     AG   +   I   +++ G   D   YN+++
Sbjct: 557 LP--------------DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVV 602

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CK G ++ A ++ +E+++K + P   TYG++++GL ++DR ++A+ +F +    G  
Sbjct: 603 DGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIE 662

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAI-- 620
            +  +Y SL+    +  +   A+ +  + ++     +  +  S+ + L K  E++ A+  
Sbjct: 663 LNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALIC 722

Query: 621 -QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            Q + EM    N +    Y+I + GLC+  +  +A   +  + +   I    +   +I G
Sbjct: 723 FQSMKEMKCSPNTYT---YSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISG 779

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL--CRMKSVG 737
           L K G +  A  +F     NG I      N L+  +  S  N+ + AY +    R++   
Sbjct: 780 LAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGM--SNANRPMEAYQVFEETRLRGCR 837

Query: 738 YDLDACL 744
            ++  C+
Sbjct: 838 LNVKTCI 844



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 164/618 (26%), Positives = 295/618 (47%), Gaps = 33/618 (5%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           VY+  ++ N +     FLLA A   + +  +    ++ F         S       K+L+
Sbjct: 79  VYVLRSLKNPSLAAPFFLLASASSSQPLPPDAYNAVLPF--------LSHDLAALEKVLE 130

Query: 193 EMTQRGI-LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           EM+  G  LPN     +V + L +  R ++A+R+   M+     P F AY  L+    + 
Sbjct: 131 EMSHLGYGLPNPACAALVAT-LVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEA 189

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           R+ + AL LLR  +  G+   +  ++ L+  L R  + + A A   ++    +EPD+VLY
Sbjct: 190 RQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLY 249

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            V I    +AG V  A K   +++  G+ PD   Y +++   C  G L +A  L  ++  
Sbjct: 250 NVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEA 309

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
              +P  + +  +I G       DDA KL  ++ + GC PSV  FN+++  L K  ++++
Sbjct: 310 ERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 369

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  LF  M+    P +              ++   +++  C AG +++AYKI  ++  +G
Sbjct: 370 ALTLFDVMKKDAKPNI--------------STYNIIIDMLCMAGRVNEAYKIRDEMELAG 415

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++++ N +++  CK   +  A ++F+    +G  P+SVTY +LI+GL +  + +DA+
Sbjct: 416 LFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAY 475

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEE 609
           R+F +M   G   +P +Y SL+       +      ++ + +R   GR D ++ +  ++ 
Sbjct: 476 RLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRR-GGRPDLTLLNTYMDC 534

Query: 610 FLQKGEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
             + GEVE   + + E D K   F   +  Y+I + GL + GQ +E  NIF  + +    
Sbjct: 535 VFKAGEVEKG-RAIFE-DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFA 592

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           +   +   ++ GLCK G +D A +V L  +K   +  P V  Y       +K ++   AY
Sbjct: 593 LDARAYNAVVDGLCKSGKVDKAYEV-LEEMKVKHV-HPTVATYGSIVDGLAKIDRLDEAY 650

Query: 728 HLLCRMKSVGYDLDACLY 745
            L    KS G +L+  LY
Sbjct: 651 MLFEEAKSKGIELNVILY 668



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 205/433 (47%), Gaps = 6/433 (1%)

Query: 5   LNEVLTILDTVTPIEPALEPLLP-FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSF 63
           +NE   I D     E  L  L P  LS   +   + K    +   R F  A++R    + 
Sbjct: 401 VNEAYKIRD-----EMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNS 455

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            +  ++I  L K    D  ++  +++          ++  LI  ++  G  E   + + +
Sbjct: 456 VTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKE 515

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M     +PD+ + N  ++  F+        A++ +M     LP++ ++S+LI+GL+K+G+
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
                 +   M+Q+G   +   Y  V+ GLC+  + D+AY +  +MK     P    Y +
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +++G  K+ R+DEA  L    +  G    +  YS LIDG  +  R DEAY    +M ++ 
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + P+V  +  ++  L +  ++ +A+     M+E    P+TY Y+ LI G C +   ++A 
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
               E+ K+  +PN  T+T +I G+ + G + DA  LF + +  G  P    FNALI+G+
Sbjct: 756 VFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGM 815

Query: 424 CKAGELEKANLLF 436
             A    +A  +F
Sbjct: 816 SNANRPMEAYQVF 828



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 167/327 (51%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K G+ EK    F  MK F   PDV  Y+ +++   +         ++  M +     + 
Sbjct: 536 FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA 595

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++ +++GL KSGK + A ++L+EM  + + P   TY  ++ GL +I+R DEAY LF +
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            K  G   + + Y++L++GF K+ R+DEA  +L    K G  P + +++ L+D L + + 
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            DEA   ++ M E K  P+   Y ++I GL    K   A     +M+++G++P+   Y  
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G   +G +  A SL         +P++ +F  LI GM       +A ++F +    G
Sbjct: 776 MISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLL 435
           C  +V    +L+D L K   LE+A ++
Sbjct: 836 CRLNVKTCISLLDALNKTECLEQAAIV 862


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 303/679 (44%), Gaps = 83/679 (12%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F VLI GY + G+  +A+E    MK     PD+  YN ++N   +      A  +  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +N  PN++T++ LI+   KS   E A+ M DEMT + ++P+  TYT +++GLC+  + +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F +M++ G  P+  +Y  L++   K   V EA  L       G    +  Y+ L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGLF+A   + A   ++ + EE + P+ V Y  +I G  + G V     LL +M E+ I 
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y++++ G+   GLL++A  +  ++ +R+ LPN   +  LI G  +      A  L
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M+  G   +  + ++ ++ L ++G +E+A+ LF  M           +S+G   + D
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM-----------MSRG--LLPD 366

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAES------------------------------ 490
           + +  +M++ +  AG    A+ I  ++ E                               
Sbjct: 367 RVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTG 426

Query: 491 ----GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
               G  PD  T+N++IN +CK GN+  ALKL  E++  GL+P+S+T   L+  L     
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E    +   M   G  P+P  +K+++  S + R+  +      Q               
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQ--------------- 531

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                           L+ M  KL+   L+ Y   +   C+ G ++ A  +F  ++    
Sbjct: 532 ----------------LVGMGVKLD---LSTYNTLISTFCRLGMIRRATLVFKDMMGKGI 572

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   LIHG C   +L  A  V    L  G        N LL  L  ++  K+  A
Sbjct: 573 LADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE--A 630

Query: 727 YHLLCRMKSVGYDLDACLY 745
             L+ +MK  G   +A  Y
Sbjct: 631 AGLVNQMKERGLVPNATTY 649



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 234/475 (49%), Gaps = 14/475 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  L+ G +K G    A + F  + E    P+   Y+A+++   +         +  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + +  PN++ +S +++G +K G    A+ ++ +M QR ILPN F Y  +I G  + ++ 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +MK  G   +    ++ +N   +  R++EA  L +     G +P   +Y+ +
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG F+A +  +A+   ++M E+    DVV Y V+I GL + GK  ++    + MR+ G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD+  +N +I  +C  G L  A  L  E+      PN+ T  IL+  +C  G ++    
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L N M   G  P+     A++D   K+    +A+++ +  +         +L   G ++ 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKS---RRADVILHXHD---------QLVGMGVKL- 539

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D ++  T++  +C  G+I +A  +   +   G L DIITYN+LI+G+C   ++  A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            ++  +G+ P+  TY  L+ GL      ++A  +  QM + G  P+   Y  L++
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVS 654



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 240/522 (45%), Gaps = 34/522 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  ++ GY K G   +A++   KM + +  P+V++Y  +++  F+     +AL ++ EM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N       +N L +SG+ E A ++  +M  RG+LP++  YT ++ G  +  + 
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+ +  +M +     D VAYN L+NG  KL +  E+ +      + G  P   +++ +
Sbjct: 384 SDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTM 442

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+   +      A     +M    ++P+ +   ++++ L  AG+++  M LL+DM   G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP------NTHTFTILICGMCRNGM 393
            P    + A++          ++R   V +   D L       +  T+  LI   CR GM
Sbjct: 503 HPTPTTHKAVLDAS------SKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +  A  +F  M   G    +  +NALI G C +  L+KA  +  +M           L++
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM-----------LTE 605

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G +   +  +   ++     A LI +A  ++ Q+ E G +P+  TY+ L++G  K+GN+ 
Sbjct: 606 GVSP--NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +KL+ E+  KG  P + TY  LI+   +  +   A  +  +M   G  P+ + Y  L+
Sbjct: 664 ECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723

Query: 574 T-WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             W    ++  L  SL   Y         E+ +  EE  +KG
Sbjct: 724 CGWYKLSKQPELNKSLKRSY-------QAEAKRLFEEMNEKG 758



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 185/376 (49%), Gaps = 12/376 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK-MKEFDCQPDVYIYNAVLNI 142
           Q + E  SG   VV+  + VLI+G +K+G  E   ESF   M++    PD   +N ++N 
Sbjct: 391 QEMTEKSSG-FDVVA--YNVLINGLFKLGKYES--ESFHTGMRQLGLAPDSATFNTMINA 445

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++     AL +  EM      PN +T ++L+  L  +G+ E  + +L++M   G  P 
Sbjct: 446 YCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPT 505

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  V+    +  RAD       ++   G   D   YN L++ FC+L  +  A  + +
Sbjct: 506 PTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFK 565

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G +  + +Y+ LI G   +    +A+A + +M  E + P+V  Y +++ GLS A 
Sbjct: 566 DMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAAR 625

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +K+A  L++ M+ERG+VP+   Y+ L+ G   +G + +   L  E+  +  +P T T+ 
Sbjct: 626 LIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYN 685

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG---LCKAGELEKANLLFYKM 439
           +LI    +   +  A++L  +M+  G  P+   ++ LI G   L K  EL K+    Y+ 
Sbjct: 686 VLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQA 745

Query: 440 EIGKNPTLFLRLSQGG 455
           E  +   LF  +++ G
Sbjct: 746 EAKR---LFEEMNEKG 758



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 228/506 (45%), Gaps = 29/506 (5%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E++S  +   + V    ++   + G  E+A E F  M      PD   Y ++++  F+  
Sbjct: 322 EMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  EM + +   ++V +++LINGL K GK E +      M Q G+ P+  T+ 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+  C+      A +L  +MK  G  P+ +  N L+   C    +++ + LL      
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF P   ++  ++D   +++R D     + ++    ++ D+  Y  +I      G ++ A
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRA 560

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +  DM  +GI+ D   YNALI G+C    L +A ++  ++      PN  T+ IL+ G
Sbjct: 561 TLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGG 620

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           +    ++ +A  L N+M++ G  P+   ++ L+ G  K G +++   L+ +M        
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM-------- 672

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              +++G   V    +   ++  +     + +A +++ ++   G  P+  TY+ LI G+ 
Sbjct: 673 ---ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWY 727

Query: 508 KVG---NINGALK---------LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           K+     +N +LK         LF+E+  KG  P   T   +   L +  ++ DA RI  
Sbjct: 728 KLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILN 787

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++ +           + + W  R RK
Sbjct: 788 KLYKKKTVQE---LLAGVLWESRERK 810



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 213/462 (46%), Gaps = 34/462 (7%)

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +I   V  + V+I G    G++  A++LL  M+  G  PD   YN L+ GFC +G L  A
Sbjct: 12  EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTA 71

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           + L  EI   +  PN  T+T LI   C++  ++DA  ++++M      P V  +  +++G
Sbjct: 72  KKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNG 131

Query: 423 LCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRVH---------------D 460
           LCK+G++E+A  +F +M E+G  P      TL   L + GN                  D
Sbjct: 132 LCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFD 191

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 +++    AG+ + A  +   L E   +P+ +TY++LI+G CK+G++N    L +
Sbjct: 192 VVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQ 251

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++ K + P+ + Y ++++G  +     +A  +  +M Q    P+  VY +L+    +  
Sbjct: 252 EMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKAD 311

Query: 581 KFSLAFSLWLQYLRDISGRD-DESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQL 635
           +  +A  L+    +++  R  +E+   I+ F+    + G +E A +   +M  +      
Sbjct: 312 QRGIALDLF----KEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  + G  + G+  +A NI   + E  +     +   LI+GL K G  +       +
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE---SESFH 424

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           T      L P    +      + K+    +A  LL  MKS G
Sbjct: 425 TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 12/355 (3%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+ + +I+   K        + L+E++S  +   S    +L+      G+ EK ++    
Sbjct: 437 ATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLND 496

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M      P    + AVL+ + + +   + L  + ++V +    ++ T++ LI+   + G 
Sbjct: 497 MLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGM 556

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A  +  +M  +GIL +  TY  +I G C  +   +A+ +  +M   G SP+   YN 
Sbjct: 557 IRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNI 616

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL G    R + EA  L+   ++ G VP   +Y  L+ G  +     E    Y +M  + 
Sbjct: 617 LLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKG 676

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL------- 356
             P    Y V+I   ++  K+  A +L+ +M+ RGI P++  Y+ LI G+  L       
Sbjct: 677 FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELN 736

Query: 357 -----GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
                    +A+ L  E+ ++  +P  +T   +   + + G   DAQ++ NK+ K
Sbjct: 737 KSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYK 791


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 261/558 (46%), Gaps = 30/558 (5%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           TV + +       V   F  WA    + R F     V +  L  N               
Sbjct: 103 TVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNK-------------- 148

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N+   ++V   ++  + + G  ++A+    +M+           N VL++A    L  +A
Sbjct: 149 NLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIA 208

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++ EM +    P+ V+F L++      G+   A K L+ M +RG + +  T T++I  
Sbjct: 209 ENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDA 268

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQ    +     F KM + G +P+ + + AL+NG CK   + +A  LL    + G+ P 
Sbjct: 269 FCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPN 328

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + +++ LIDGL +    ++A+  + K+   +  +P+V  Y  MI G  +  K+  A  LL
Sbjct: 329 VYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLL 388

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S M+E+G+VP+T  Y  LI G C +G   +A  L   + K    PN +T+  +I G+C+ 
Sbjct: 389 SRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK 448

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +D+A +L NK+   G       +  L+   C+  +  ++ + F KM ++G  P     
Sbjct: 449 GSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP----- 503

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  S  T++  +C    + ++ ++  +    G +P   TY S+I G+C+ G
Sbjct: 504 ---------DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYG 554

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N + A+KLF+ +   G  PDS+TYG LI+GL +  + +DA  ++  M   G +P      
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL 614

Query: 571 SLMTWSCRRRKFSLAFSL 588
           +L    C++   S A ++
Sbjct: 615 TLAYEYCKKDDSSTAINV 632



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 251/526 (47%), Gaps = 26/526 (4%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++   +++GK + A+ M+ EM  +G++ +  T   V+     +   + A  +F++M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            SPD V++  ++   C + RV EA   L +  + GF+    + + +ID   +    +   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            ++ KM E  + P+V+ +  +I GL + G +K A +LL +M  RG  P+ Y +  LI G 
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 354 CDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           C  G  ++A  L +++ + D   PN HT+T +I G C+   ++ A+ L ++M++ G  P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              +  LIDG CK G   +A  L   M + G +P ++              +   +++  
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIY--------------TYNAIIDGL 445

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +AY++L +++  G   D +TY  L++  C+  + N +L  F ++   G  PD 
Sbjct: 446 CKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDI 505

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            +Y TLI+   R  + +++ R+F +    G  P+   Y S++   CR    SLA  L+ +
Sbjct: 506 HSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQ 647
                   D  +  ++   L K   E+ +     +   + D  L+P  +  + L    C+
Sbjct: 566 MSNHGCAPDSITYGALISGLCK---ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCK 622

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                 A+N+   L + + I T  +   L+  LC  G LD+A   F
Sbjct: 623 KDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFF 665



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 197/421 (46%), Gaps = 54/421 (12%)

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +++MV++   PN++ F+ LINGL K G  + A ++L+EM +RG  PN +T+T +I GLC+
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341

Query: 216 INRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
               ++A+RLFLK+ +  G  P+   Y A++NG+CK  +++ A  LL   ++ G VP   
Sbjct: 342 KGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTN 401

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD- 333
           +Y+ LIDG  +   +  AY     M +E   P++  Y  +I GL + G + +A +LL+  
Sbjct: 402 TYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461

Query: 334 ----------------------------------MRERGIVPDTYCYNALIKGFCDLGLL 359
                                             M + G  PD + Y  LI  FC    +
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQM 521

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            ++  L  E      +P   T+T +ICG CR G    A KLF +M   GC P    + AL
Sbjct: 522 KESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGAL 581

Query: 420 IDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I GLCK  +L+ A NL    M+ G +P    RL              T+  +YC      
Sbjct: 582 ISGLCKESKLDDARNLYDAMMDKGLSPCEVTRL--------------TLAYEYCKKDDSS 627

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A  +L +L +      I T N+L+   C  G ++ A   F +L  K    + VT    +
Sbjct: 628 TAINVLDRLEKR---QWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFM 684

Query: 539 N 539
           N
Sbjct: 685 N 685



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 39/348 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+GY K     +A     +M+E    P+   Y  +++   +   F+ A  +   M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    PNI T++ +I+GL K G  + A ++L++++  G+  +  TYTI++S  C+    
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + +   F KM   G +PD  +Y  L++ FC+ +++ E+  L       G +P   +Y+ +
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  R      A   +++M      PD + YG +I GL +  K+ DA  L   M ++G+
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P            C++  L    +L  E  K+D                       A  
Sbjct: 607 SP------------CEVTRL----TLAYEYCKKDD-------------------SSTAIN 631

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           + +++EK     +V   N L+  LC  G+L+ A L F+K+ + K P +
Sbjct: 632 VLDRLEKRQWIRTV---NTLVRKLCSEGKLDMAALFFHKL-LDKEPNV 675



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 7/271 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    D  ++ L+++    +      + +L+S + +  D  ++L  F KM +
Sbjct: 439 NAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLK 498

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD++ Y  +++   R++    +  ++ E V L  +P   T++ +I G  + G T +
Sbjct: 499 VGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+   M+  G  P+  TY  +ISGLC+ ++ D+A  L+  M D G SP  V    L  
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAY 618

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK      A+ +L   EK  ++  + +   L+  L    + D A  ++ K+ ++  EP
Sbjct: 619 EYCKKDDSSTAINVLDRLEKRQWIRTVNT---LVRKLCSEGKLDMAALFFHKLLDK--EP 673

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           +V    V + G        +   L+S++ ER
Sbjct: 674 NV--NRVTLLGFMNKCYESNKYGLVSELSER 702



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 50/363 (13%)

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           ++     NG + +A  +  +M+  G   S    N ++D     G +E A  +F +M + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P              D  S + MV   C  G + +A K L  + E G + D  T   +
Sbjct: 220 VSP--------------DCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLI 265

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+ FC+ G +N  +  F ++   GL P+ + +  LINGL +    + AF +  +M + G 
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P+   + +L+   C++     AF L+L+ +R                            
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG------------------------- 360

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
                +K N   +  YT  + G C++ ++  A  + S + E   +    +   LI G CK
Sbjct: 361 -----YKPN---VHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            G    A ++     K GF       N ++  L   K      AY LL ++   G   D 
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL--CKKGSLDEAYRLLNKVSVHGLQADG 470

Query: 743 CLY 745
             Y
Sbjct: 471 VTY 473


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 192/690 (27%), Positives = 299/690 (43%), Gaps = 121/690 (17%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++S  LK   F    + ++ + +   +    +F  L+ GY   GD   A + F +M    
Sbjct: 312 LLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG 371

Query: 129 CQPDVYIYNAVLNIAFRKQ------LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
             P    YN  +     ++      L  L   VY EM+  +C+ N V  +     L   G
Sbjct: 372 SPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVG 431

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K E A ++L EM ++G +P+  TYT VI+ LCQ  + ++++ LF +MK +G +PD   Y 
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYT 491

Query: 243 ALLNGFCKLRRVDEA-------------------LALLRSFEKD---------------- 267
            L++ FCK   +++A                    ALL ++ K                 
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM------------FEEK----IEPDVVLY 311
              P   +YS LIDGL +A    +A   Y K+            FE      I P+VV Y
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           G +I GL +A KV DA +LL  M   G  P+   Y+ALI GFC +G +D A+ + + + K
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
              LP+ HT+T LI  M ++G +D A K+ ++M    C P+V  + A+IDGL K GE+EK
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731

Query: 432 A-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A NLL    E G +P +                                           
Sbjct: 732 ALNLLSLMEEKGCSPNV------------------------------------------- 748

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
                 +TY +LI+G  K G  + +LKLFK++  KG  P+ VTY  LIN        ++A
Sbjct: 749 ------VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEA 802

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---- 606
             +  +M     T  P   K L  + C  + FS  F   L  L ++   +   +      
Sbjct: 803 HLLLDEMKH---THWP---KHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGM 856

Query: 607 -IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            I+ F + G +E A++    L+E+   LN      Y   +  LC   QV+EA  +++ + 
Sbjct: 857 LIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMT 916

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
               +      V L+ GL +    D A+ +
Sbjct: 917 RKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 174/725 (24%), Positives = 315/725 (43%), Gaps = 83/725 (11%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT-- 85
           FL+ + V +V+   ++P++  RFF+WA   +R   ++   A    L +  GF+   +T  
Sbjct: 98  FLTDSVVVAVLRAVRSPELCVRFFLWA---ERQVGYSHTGACYDALAEILGFEDPARTAE 154

Query: 86  --LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
             L E+   +  V+  +  VL+    + G  ++ALE  G++K+F  +P    YNA++ + 
Sbjct: 155 RLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVL 214

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                  +   V  EM       +  T       L K G+   A+ ML+   +     + 
Sbjct: 215 ASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLE---KEDFNLDT 271

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
              T +ISGL + +  +EA     +M+ + C P+ V Y  LL+GF K ++      ++  
Sbjct: 272 VLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINM 331

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI-------- 315
              +G  P    ++ L+ G   A  Y  AY  + +M      P  V Y + I        
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEE 391

Query: 316 ---------------------------------RGLSEAGKVKDAMKLLSDMRERGIVPD 342
                                            R L   GK + A ++L +M  +G VPD
Sbjct: 392 LPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPD 451

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  Y  +I   C    ++++  L  E+ +    P+ +T+TILI   C+ G+++ A+  F+
Sbjct: 452 TSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFD 511

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   GC P+V  + AL+    K+ +L +A+ +F++M +    P              + 
Sbjct: 512 EMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP--------------NA 557

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQL-AESGNL---------------PDIITYNSLING 505
            +   +++  C AG I KA ++  +L   SGN+               P+++TY +LI+G
Sbjct: 558 VTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDG 617

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK   ++ A +L   +   G  P+ + Y  LI+G  ++ + ++A  +F +M + G  PS
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLL 624
              Y SL+    +  +  LA  +  + L D    +  +  ++ + L K GE+E A+  L 
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
            M+ K     +  YT  + GL + G+   +L +F  +          +   LI+  C  G
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797

Query: 685 YLDLA 689
            LD A
Sbjct: 798 LLDEA 802



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 174/336 (51%), Gaps = 5/336 (1%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A+I  L K        + LD + +        V+  LI G+ K+G  + A E F +M + 
Sbjct: 613 ALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC 672

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P V+ Y ++++  F+     LA+ V  EM+  +C PN+VT++ +I+GLSK G+ E A
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKA 732

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + +L  M ++G  PN  TYT +I GL +  +AD + +LF +M   GC+P++V Y  L+N 
Sbjct: 733 LNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINH 792

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C    +DEA  LL   +   +   L  Y C + G   +K++  +     +M   +  P 
Sbjct: 793 CCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPI 850

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI---VPDTYCYNALIKGFCDLGLLDQARS 364
             +YG++I   S+AG+++ A++L  ++ E      +  T  Y +LI+  C    +++A +
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFT 910

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           L  E+ ++  +P+   F  L+ G+      D+A +L
Sbjct: 911 LYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 215/523 (41%), Gaps = 35/523 (6%)

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           +++   C+    DEA     ++KD G  P  V YNAL+       +V+    + +     
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF     +       L +  R+ +A     K   E    D VL   MI GL EA    +A
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFNEA 290

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           M  L  MR    +P+   Y  L+ GF         + +   +      PN   F  L+ G
Sbjct: 291 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHG 350

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C  G    A KLFN+M   G  P    +N  I  +C   EL  A LL    ++ +    
Sbjct: 351 YCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML- 409

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                   + V +K +        C  G   KA++IL ++   G +PD  TY  +I   C
Sbjct: 410 ------AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLC 463

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +   +  +  LF+E++  G+ PD  TY  LI+   +    E A   F +M   GC+P+  
Sbjct: 464 QAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVV 523

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQ---- 621
            Y +L+    + ++   A  ++   + D +   +    S  I+   + GE++ A +    
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIF-HRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582

Query: 622 -----GLLEMDFKL--NDF-QLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
                G +E DF    ND   +AP    Y   + GLC+  +V +A  +   ++   A   
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAML--AAGCE 640

Query: 670 PPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           P   V   LI G CK G +D A +VFL   K G++  P V  Y
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYL--PSVHTY 681



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 178/390 (45%), Gaps = 21/390 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF----------------VLISGYYK 110
           SA+I  L K        +  ++L   + +V SD +F                 LI G  K
Sbjct: 561 SALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCK 620

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
                 A E    M    C+P+  +Y+A+++   +      A  V+  M K   LP++ T
Sbjct: 621 AQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHT 680

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI+ + K G+ ++A+K+L EM      PN  TYT +I GL ++   ++A  L   M+
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLME 740

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           + GCSP+ V Y AL++G  K  + D +L L +     G  P   +Y  LI+    A   D
Sbjct: 741 EKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLD 800

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA+    +M        +  Y   ++G S+  K   ++ LL +M     VP    Y  LI
Sbjct: 801 EAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLI 858

Query: 351 KGFCDLGLLDQARSLQ---VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             F   G L+ A  L    VE+    ++ +T  +  LI  +C    V++A  L+ +M + 
Sbjct: 859 DSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFY 437
           G  P + +F +L+ GL +  + ++A  L Y
Sbjct: 919 GIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 12/307 (3%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL--RSGNVS 95
           I K  N Q     F+   K   L S  + +++I  + K    DL  + L E+   S N +
Sbjct: 656 IGKIDNAQ---EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712

Query: 96  VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           VV+  +  +I G  KVG+ EKAL     M+E  C P+V  Y A+++   +      +L +
Sbjct: 713 VVT--YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKL 770

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           + +M    C PN VT+ +LIN    +G  + A  +LDEM       +   Y   + G  +
Sbjct: 771 FKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK 830

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL---LRSFEKDGFVPR 272
             +   +  L  +M+     P    Y  L++ F K  R++ AL L   L        +  
Sbjct: 831 --KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTS 888

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
            G Y+ LI  L  A + +EA+  Y +M  + I PD++++  +++GL E  K  +A++L  
Sbjct: 889 TGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948

Query: 333 DMRERGI 339
                G+
Sbjct: 949 GRCHEGV 955



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 108/459 (23%), Positives = 185/459 (40%), Gaps = 76/459 (16%)

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARS---LQVEIWKRDSLPNTHTFTILICGMCRN 391
           R+ G      CY+AL +    LG  D AR+   L  EI + D         +L+   CR+
Sbjct: 126 RQVGYSHTGACYDALAE---ILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRH 182

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G+ D+A +   +++  G  PS   +NAL+  L  AG++E    + ++++   + + F   
Sbjct: 183 GLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVE----MGFRVQKEMSASGF--- 235

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D++++    +  C  G    A  +L +  E  NL D +    +I+G  +   
Sbjct: 236 ------CMDRSTIGYFAQALCKVGRWADALNMLEK--EDFNL-DTVLCTQMISGLMEASL 286

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            N A+     ++     P+ VTY TL++G  +  +     RI   M   GC P+P+++ S
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346

Query: 572 LMTWSCRRRKFSLAFSLWLQ---------------YLRDISGRD--------DESMKSIE 608
           L+   C    ++ A+ L+ +               ++  I G++        D   K  E
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406

Query: 609 EFLQK-------------------GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           E L                     G+ E A Q L EM  K      + YT  +  LCQ  
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466

Query: 650 QVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           +V+++  +F  +   +A V P   +   LI   CK G ++ A   F      G    P V
Sbjct: 467 KVEKSFLLFQEMK--RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVG--CSPNV 522

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYP 746
             Y      + K  + + A+ +  RM      +DA  YP
Sbjct: 523 VTYTALLHAYLKSKQLIQAHDIFHRM------VDAACYP 555


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/583 (27%), Positives = 266/583 (45%), Gaps = 60/583 (10%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAAKR+      S  
Sbjct: 34  ILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTY 93

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVV-----SDVFFVLISGYYKVGDCEKALESF 121
            A+I  L     +   W+ + E+    + VV     SDV  +L  G  K+    +A+  F
Sbjct: 94  MALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRML--GNAKM--VRQAITIF 149

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLLINGLSK 180
            ++K   CQP    YN+++ +   +  +     +Y EM  + +C P+ VT+S LI+   K
Sbjct: 150 YQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCK 209

Query: 181 SGKTEVAIKMLDEMTQRGILPNK-----------------------------------FT 205
            G+ + AI++L+EM + G+ P                                     FT
Sbjct: 210 LGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFT 269

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I GL +  R DEAY  F +M+  GC PD V  N ++N   K  R+D+A+ L +  E
Sbjct: 270 YTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEME 329

Query: 266 KDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
               +P + +Y+ +I  LF +K R  E  +W+ +M E  I P    Y ++I G  +  ++
Sbjct: 330 TLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRM 389

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++
Sbjct: 390 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 449

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I  + + G +DDA  +F++M K GC P V  +NAL+ GL + G L++A     +M     
Sbjct: 450 IKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM----- 504

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                   Q    + D  S   ++      G  H+A ++L  + +S   PD+++YN+++ 
Sbjct: 505 --------QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLG 556

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                G    A KL KE+   G   D +TY +++  + +VD E
Sbjct: 557 ALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDHE 599



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 211/477 (44%), Gaps = 28/477 (5%)

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S ++  L  AK   +A   + ++   K +P    Y  MI  L   G+ +   +L ++M  
Sbjct: 130 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 189

Query: 337 RG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            G   PDT  Y+ALI  FC LG  D A  L  E+ +    P T  +T+LI    +     
Sbjct: 190 EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAH 249

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A  LF +M    C P V  +  LI GL KAG +++A   F +M+            + G
Sbjct: 250 GALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ------------REG 297

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNING 514
            R  D   +  M+     AG +  A K+  ++     +P ++TYN++I   F      + 
Sbjct: 298 CRP-DTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASE 356

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
               F+ ++  G+ P S TY  LI+G  + +R E A  +  +M + G  P PA Y SL+ 
Sbjct: 357 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 416

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              + +++ LA  L+ Q L++  G     + +  I+   + G +++AI    EM    N 
Sbjct: 417 ALGKAKRYDLACELF-QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM----NK 471

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
              AP    Y   + GL + G + EAL+    + E   I    S   +++GL K G    
Sbjct: 472 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 531

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           AM++ L  +K   + RP V +Y       S       A  L+  M ++G++ D   Y
Sbjct: 532 AMEM-LSNMKQSTV-RPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 586



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 210/496 (42%), Gaps = 27/496 (5%)

Query: 97  VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V D  F+ I   +K G D EKALE    M   D      +    + +  + Q F  A   
Sbjct: 26  VLDERFIRILKIFKWGPDAEKALEVL--MLRVDHWLVREVMKTDVGVNVKMQFFRWAAK- 82

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI---LPNKFTYTIVISG 212
                + N   +  T+  LI+ L    +     KM+ EM +  I    P + +  + + G
Sbjct: 83  -----RRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLG 137

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF-VP 271
             ++ R  +A  +F ++K   C P   AYN+++       + ++   L      +G   P
Sbjct: 138 NAKMVR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 195

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +YS LI    +  R D A     +M E  ++P   +Y ++I    +      A+ L 
Sbjct: 196 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 255

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +MR +   PD + Y  LI+G    G +D+A     E+ +    P+T     +I  + + 
Sbjct: 256 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 315

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +DDA KLF +ME   C PSV  +N +I  L ++           K    + P+ F R+
Sbjct: 316 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFES-----------KSRASEVPSWFERM 364

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            + G       +   +++ +C    + KA  +L ++ E G  P    Y SLI+   K   
Sbjct: 365 KESGISP-SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GC P    Y +
Sbjct: 424 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 483

Query: 572 LMTWSCRRRKFSLAFS 587
           LM+   R      A S
Sbjct: 484 LMSGLARTGMLDEALS 499


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 249/545 (45%), Gaps = 29/545 (5%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           DE+ S  V +   V   L+ GY K      ALE F KM E    P+   Y  ++    + 
Sbjct: 338 DEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKN 397

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +Y +M   N  P +   + LI G  K    E A K+ DE     I  N FTY
Sbjct: 398 GNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTY 456

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++S LC+  +  EA  L+ KM D G +P  V+YN+++ G C+   +D A ++      
Sbjct: 457 NSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLD 516

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +YS L+DG F+    + A+  + +M +E I P    Y + I GL + G+  +
Sbjct: 517 CGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSE 576

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A  +L    E+G VP    YN+++ GF   G +  A +   E+ +    PN  T+T LI 
Sbjct: 577 AQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLIN 636

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG---K 443
           G C+N   D A K+ N+M   G    +  + ALIDG CK  ++E A+ LF ++  G    
Sbjct: 637 GFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSP 696

Query: 444 NPTLFLRLSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAYKIL 484
           N  ++  L  G   ++                   D  +  T+++     G +  A  + 
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            +++  G +PDII Y  LING C  G +  A K+  E++   + P+   Y  LI G  + 
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              ++AFR+  +M   G TP+   Y  L+    +    +L   L L++      +D + M
Sbjct: 817 GNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKF------KDGKGM 870

Query: 605 KSIEE 609
           K I E
Sbjct: 871 KRINE 875



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 169/614 (27%), Positives = 282/614 (45%), Gaps = 27/614 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVK 161
           +++    K  + E+A + F + K    + D   Y+ V+  AF K L + LA  +  +M  
Sbjct: 249 IMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQ-AFCKNLDVELACGLLKDMRD 307

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              +P+  TF+ +I    K G    A+++ DEM   G+  N    T ++ G C+ ++   
Sbjct: 308 KGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVS 367

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A   F KM ++G SP+ V Y  L+   CK   + +A  L    +     P +   + LI 
Sbjct: 368 ALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIR 427

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVV---LYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           G  + +  +EA     K+F+E +  D+     Y  ++  L + GK+ +A  L   M ++G
Sbjct: 428 GFLKVESREEA----SKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    YN++I G C  G LD A S+  ++      PN  T++IL+ G  +NG  + A 
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNR 457
            +F++M      PS   +N  I+GLCK G   +A  +  K +E G  P            
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL--------- 594

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                +  ++++ +   G +  A     ++ ESG  P++ITY +LINGFCK  N + ALK
Sbjct: 595 -----TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +  E++ KGL  D   YG LI+G  +    E A  +F ++   G +P+  +Y SL++   
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
                  A +L  + L +    D ++  + I+  L++G +  A+    EM  K     + 
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT+ + GLC  GQ++ A  I + +         P    LI G  K G L  A  +    
Sbjct: 770 IYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829

Query: 697 LKNGFILRPRVCNY 710
           L  G  L P    Y
Sbjct: 830 LDKG--LTPNDTTY 841



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 220/466 (47%), Gaps = 24/466 (5%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
            +DLY Q        N ++   VF V  LI G+ KV   E+A + F +    D   +++ 
Sbjct: 403 AYDLYTQM------KNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFT 455

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YN++L+   ++     A  ++ +M+     P  V+++ +I G  + G  ++A  +  +M 
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDML 515

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G+ PN  TY+I++ G  +    + A+ +F +M D    P    YN  +NG CK+ R  
Sbjct: 516 DCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTS 575

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA  +L+ F + GFVP   +Y+ ++DG  +      A   YR+M E  + P+V+ Y  +I
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  +      A+K+ ++MR +G+  D   Y ALI GFC    ++ A  L  E+      
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN+  +  LI G      ++ A  L  +M   G    +  +  LIDGL K G L  A  L
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755

Query: 436 FYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           + +M   G  P + +                 ++   C  G +  A KIL ++      P
Sbjct: 756 YSEMSAKGIIPDIII--------------YTVLINGLCGKGQLENAQKILAEMERDSITP 801

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           ++  YN+LI G  K GN+  A +L  E+  KGL P+  TY  LING
Sbjct: 802 NVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 203/427 (47%), Gaps = 27/427 (6%)

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFF---------------VLISGYYKVGDCEKAL 118
           L P         L   R GN+ + + VF                +L+ GY+K GD E A 
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
             F +M + +  P  + YN  +N   +      A  +  + V+   +P  +T++ +++G 
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K G    A+    EM + G+ PN  TYT +I+G C+ N  D A ++  +M++ G   D 
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            AY AL++GFCK + ++ A  L       G  P    Y+ LI G       + A    ++
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKR 723

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  E I  D+  Y  +I GL + G++  A+ L S+M  +GI+PD   Y  LI G C  G 
Sbjct: 724 MLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQ 783

Query: 359 LDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           L+ A+ +  E+ +RDS+ PN   +  LI G  + G + +A +L N+M   G  P+   ++
Sbjct: 784 LENAQKILAEM-ERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYD 842

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            LI+G  K G     +LL  K + GK          G  R++++ S++ ++E+     L 
Sbjct: 843 ILINGKIKGGNSALKSLLSLKFKDGK----------GMKRINEQDSIKKVIEKAVNKYLR 892

Query: 478 HKAYKIL 484
            +A K++
Sbjct: 893 PEAQKMI 899



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 3/241 (1%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ TT+ +   K  N  +  +       +      A+  A+I    K    +       E
Sbjct: 629 ITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSE 688

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L  G +S  S ++  LISGY  + + E AL    +M       D+  Y  +++   ++  
Sbjct: 689 LLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGR 748

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
            +LAL +Y EM     +P+I+ +++LINGL   G+ E A K+L EM +  I PN   Y  
Sbjct: 749 LVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNA 808

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KD 267
           +I+G  +     EA+RL  +M D G +P+   Y+ L+NG  K++  + AL  L S + KD
Sbjct: 809 LIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING--KIKGGNSALKSLLSLKFKD 866

Query: 268 G 268
           G
Sbjct: 867 G 867


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/680 (25%), Positives = 320/680 (47%), Gaps = 51/680 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKM 124
           SA++  L+K   F L  +  +++ S  V +  DV+    +I    ++ D  +A E    M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVS--VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +   C  ++  YN +++   +KQ    A+ +  ++   +  P++VT+  L+ GL K  + 
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E+ ++M+DEM      P++   + ++ GL +  + +EA  L  ++ D G SP+   YNAL
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  CK R+  EA  L     K G  P   +YS LID   R  + D A ++  +M +  +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +  V  Y  +I G  + G +  A   +++M  + + P    Y +L+ G+C  G +++A  
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+  +   P+ +TFT L+ G+ R G++ DA KLFN+M +    P+   +N +I+G C
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553

Query: 425 KAGELEKANLLFYKM-EIGKNP---------------------TLFLRLSQGGNRVHDKA 462
           + G++ KA     +M E G  P                      +F+     GN   ++ 
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++  +C  G + +A  +  ++ + G   D++ Y  LI+G  K  +      L KE+
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             +GL+PD V Y ++I+   +    ++AF I+  M   GC P+   Y +++   C+    
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE--------NAI-QGLLEMDFKLNDF 633
           + A  L  +     S  +  +     + L KGEV+        NAI +GLL         
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA-------- 785

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
             A Y + + G C+ G+++EA  + + ++        P C+    +I+ LC+R  +  A+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMI---GDGVSPDCITYTTMINELCRRNDVKKAI 842

Query: 691 DVFLYTLKNGFILRPRVCNY 710
           +++    + G  +RP    Y
Sbjct: 843 ELWNSMTEKG--IRPDRVAY 860



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 182/692 (26%), Positives = 316/692 (45%), Gaps = 54/692 (7%)

Query: 29  LSKTTVTSVIMKT-KNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDLYWQTL 86
           L    V  +++ T  +P++G RFF +    +    S AS   +I  L+K N   L+W   
Sbjct: 68  LKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKAN---LFWPAS 124

Query: 87  DELRSGNVSVV--SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
             L++  +  +  SDVF VL S Y K                FD     Y+         
Sbjct: 125 SLLQTLLLRALKPSDVFNVLFSCYEKC--------KLSSSSSFDLLIQHYV--------- 167

Query: 145 RKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           R +  L  + V+  M+ K++ LP + T S L++GL K     +A+++ ++M   GI P+ 
Sbjct: 168 RSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           + YT VI  LC++     A  +   M+ +GC  + V YN L++G CK ++V EA+ + + 
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKD 287

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
                  P + +Y  L+ GL + + ++       +M   +  P       ++ GL + GK
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +++A+ L+  + + G+ P+ + YNALI   C      +A  L   + K    PN  T++I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI   CR G +D A     +M   G   SV  +N+LI+G CK G++  A     +M   K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 444 -NPTLFLRLSQGGN-----------RVHDKA----------SLQTMVEQYCTAGLIHKAY 481
             PT+    S  G            R++ +           +  T++     AGLI  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+  ++AE    P+ +TYN +I G+C+ G+++ A +  KE+  KG+ PD+ +Y  LI+GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
               +  +A      + +  C  +   Y  L+   CR  K   A S+  + ++     D 
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNI 657
                + +   K +      GLL+   +++D  L P    YT  +    + G  KEA  I
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLK---EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           + +++    +    +   +I+GLCK G+++ A
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 17/435 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY   G   KAL  + +M      P +Y +  +L+  FR  L   A+ ++ EM + N
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN VT++++I G  + G    A + L EMT++GI+P+ ++Y  +I GLC   +A EA 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
                +    C  + + Y  LL+GFC+  +++EAL++ +   + G    L  Y  LIDG 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K     +   ++M +  ++PD V+Y  MI   S+ G  K+A  +   M   G VP+ 
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD--DAQKLF 401
             Y A+I G C  G +++A  L  ++    S+PN  T+   +  +   G VD   A +L 
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELH 776

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           N + K G   +   +N LI G C+ G +E+A+ L  +M IG   +             D 
Sbjct: 777 NAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRM-IGDGVS------------PDC 822

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  TM+ + C    + KA ++   + E G  PD + YN+LI+G C  G +  A +L  E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 522 LQLKGLRPDSVTYGT 536
           +  +GL P++ T  T
Sbjct: 883 MLRQGLIPNNKTSRT 897



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 248/576 (43%), Gaps = 50/576 (8%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           F LLI    +S +    + +   M T+  +LP   T + ++ GL +      A  LF  M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G  PD   Y  ++   C+L+ +  A  ++   E  G    +  Y+ LIDGL + ++ 
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA    + +  + ++PDVV Y  ++ GL +  + +  ++++ +M      P     ++L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           ++G    G +++A +L   +      PN   +  LI  +C+     +A+ LF++M K G 
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+   ++ LID  C+ G+L+ A L F    +G+     L+LS     V+   SL   + 
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTA-LSF----LGEMVDTGLKLS-----VYPYNSL---IN 445

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            +C  G I  A   + ++      P ++TY SL+ G+C  G IN AL+L+ E+  KG+ P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
              T+ TL++GL R     DA ++F +M +    P+   Y  ++   C     S AF   
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF- 564

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
                            ++E  +KG V +                   Y   + GLC  G
Sbjct: 565 -----------------LKEMTEKGIVPDTYS----------------YRPLIHGLCLTG 591

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           Q  EA      L +    +       L+HG C+ G L+ A+ V    ++ G  L      
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L+   L  KD K    + LL  M   G   D  +Y
Sbjct: 652 VLIDGSLKHKDRKLF--FGLLKEMHDRGLKPDDVIY 685



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 4/297 (1%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D L  GN  +    +  L+ G+ + G  E+AL    +M +     D+  Y  +++ + +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   L   +  EM      P+ V ++ +I+  SK+G  + A  + D M   G +PN+ T
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD--EALALLRS 263
           YT VI+GLC+    +EA  L  KM+     P+ V Y   L+   K   VD  +A+ L  +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNA 778

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K G +    +Y+ LI G  R  R +EA     +M  + + PD + Y  MI  L     
Sbjct: 779 ILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           VK A++L + M E+GI PD   YN LI G C  G + +A  L+ E+ ++  +PN  T
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 229/454 (50%), Gaps = 15/454 (3%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           ++++ L+  L+KSG+ +      ++M   G +PN +TY  ++  LCQ  R +EA  +F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   GCSP+  +Y+ L+ G C+ ++VDEA  LL      G  P + +Y  L+ GL +  +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA   + +M      PD V+Y V+I G S+ G + +A +L  +M E+G +P  + YN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ GF   G   + +SL  ++ ++  +PN  TF  L+ G C+ G + +A +LF +M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           C P V  +N L+ G+C  G+  +A  L  +M   G  P              D  S   +
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP--------------DIVSYNIL 303

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ Y  +G +  A K+  ++ +SG  PD  +Y+++I+  C+ G +  A  +FK++   G 
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD+     L+ GL R +R  ++  +F  M +  C P    Y  LM   C+ ++      
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           ++ +        D E  K I E L++ + + A +
Sbjct: 424 IFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 217/442 (49%), Gaps = 15/442 (3%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G C+    ++  M    C P+ Y Y  +L    + Q F  A +V+  M    C PN+ 
Sbjct: 29  KSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF 88

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           ++S+LI GL +  K + A ++L+EM   G  PN  TY  ++SGLC++ +  EA  LF +M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GC PD V YN L++GF K   + EA  L     + G +P + +Y+ L+ G  R   +
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
               + ++ M  +   P++  +  ++ G  + G + +A +L  +MR  G  PD   YN L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           ++G C  G   +A+ L  E+ +    P+  ++ ILI G  ++G +D A KLF ++ K+G 
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P    ++ +ID LC+AG++  A ++F  M   G  P              D A +  +V
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP--------------DAAVVIPLV 374

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C    + ++ ++   + +   +P I  YN L+   CK    +   ++F EL  +G  
Sbjct: 375 IGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434

Query: 529 PDSVTYGTLINGLQRVDREEDA 550
           PD      ++  L+R D +E A
Sbjct: 435 PDVEISKVILETLRRSDDKEAA 456



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 225/485 (46%), Gaps = 49/485 (10%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           ++YN LL    K  R D            G VP   +Y  L+  L +A+R++EA + +R 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   P+V  Y ++I GL    KV +A +LL++M + G  P+   Y +L+ G C +G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L +A  L   +  R   P+   + +LI G  + G + +A +LF +M + GC P+V  +N+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           L+ G  + GE  +   LF  M   G  P +F              +   +++ +C  G +
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF--------------TFNNLLDGFCKMGDM 243

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A+++ +++   G  PD+++YN+L+ G C  G  + A +L +E+   G+ PD V+Y  L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+G  +    + A ++F ++P++G  P    Y +++   CR  K   AF ++        
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF-------- 355

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                     ++ +  G   +A                A     +IGLC+  ++ E+  +
Sbjct: 356 ----------KDMIANGSAPDA----------------AVVIPLVIGLCRGERLTESCEL 389

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F  +V+ + +   P    L++ LCK    D   ++F    + GF     +   +L +L  
Sbjct: 390 FQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRR 449

Query: 718 SKDNK 722
           S D +
Sbjct: 450 SDDKE 454



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 189/368 (51%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+ L +    D   + L+E+  G        +  L+SG  K+G  ++A++ F +M
Sbjct: 89  SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM 148

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
               C PD  +YN +++   +K     A  ++ EM++  C+P + T++ L++G S+ G+ 
Sbjct: 149 VYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                +  +M ++G +PN FT+  ++ G C++    EA+RLFL+M+  GC PD V+YN L
Sbjct: 209 GRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTL 268

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C   +  EA  LLR   + G  P + SY+ LIDG  ++   D A   + ++ +  +
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EPD   Y  +I  L  AGKV  A  +  DM   G  PD      L+ G C    L ++  
Sbjct: 329 EPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCE 388

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   + K + +P    + +L+  +C+    DD  ++F+++ + G  P V +   +++ L 
Sbjct: 389 LFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448

Query: 425 KAGELEKA 432
           ++ + E A
Sbjct: 449 RSDDKEAA 456



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 172/392 (43%), Gaps = 49/392 (12%)

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT---------------------- 380
           T  YN L++     G  D       ++     +PNT+T                      
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 381 -------------FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                        ++ILI G+CR   VD+A +L N+M   G  P+V  + +L+ GLCK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +L++A  LF +M     P              D      +++ +   G + +AY++  ++
Sbjct: 137 KLKEAVDLFSRMVYRGCPP-------------DGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G +P + TYNSL++GF + G       LFK++  +G  P+  T+  L++G  ++   
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
            +A R+F +M   GC P    Y +LM   C + K   A  L  + +R   G D  S    
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           I+ + + G +++AI+   E+     +     Y+  +  LC+ G+V  A  +F  ++   +
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
                  + L+ GLC+   L  + ++F   +K
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVK 395


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/629 (27%), Positives = 293/629 (46%), Gaps = 34/629 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LIS   K G   +A ES+ K     C P+V  YN +++   + +    ALA   EM +L 
Sbjct: 16  LISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 74

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P    +S ++    K+G    A+ +  EM  +G  P+   + +++SGL +  +  EA 
Sbjct: 75  HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 134

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF  M   GC PD V YN ++ G CK +++DEA+ LL   +++   P   +Y+ LID L
Sbjct: 135 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 194

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R  +AY  + KM E         Y V+   L  AGK+ +A ++ SDM  + +    
Sbjct: 195 CKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTD 254

Query: 344 YCYNALIKGFCDL-GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             Y+ ++ G   + G   +A  L  E+  +   P+ + ++ILI G+C+     +A+++F 
Sbjct: 255 NTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQ 314

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P+V  +N L++GL    +L+ A  L Y M           L QG  R+ D  
Sbjct: 315 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM-----------LDQG--RLPDTC 361

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S   M+  +C  G  ++AY +   + + G + +  TYN +I GF K    + A  LFK +
Sbjct: 362 SYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRM 421

Query: 523 QL----KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           Q     K   P+  TY  LI+ L + D+ E+AF++   M   G  PS  +++ L++   R
Sbjct: 422 QSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 481

Query: 579 RRKFSLAFSLWLQYLR----DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             +   AF L+ +  R     + G  +  +  I   L++G V+ A   L +M     D  
Sbjct: 482 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGI---LRRGSVDEAKDFLKQM----TDTG 534

Query: 635 LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           + P    Y   ++GLC  G+  +A  +   LV            +L+  LC +G    A 
Sbjct: 535 IVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAY 594

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           + + +    G  +   + N L+ S   ++
Sbjct: 595 EFYCWLPSVGVEVTLGMHNTLVTSCCLAR 623



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 263/594 (44%), Gaps = 82/594 (13%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           +VVS  + ++I GY K  + EKAL    +M+E    P  + Y++++    +      A+ 
Sbjct: 43  NVVS--YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMD 100

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+ EM    C P+IV F++L++GL ++ K   A ++   M  RG  P+  TY  +I+GLC
Sbjct: 101 VFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 160

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  + DEA  L  +MK    SP FV Y  L++  CK  R+ +A  +     +        
Sbjct: 161 KWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEP 220

Query: 275 SYSCLIDGLFRAKRYDEAYAWYR------------------------------------K 298
           +YS L + L RA +  EA   Y                                     +
Sbjct: 221 AYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTE 280

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +KI PD   Y ++I GL +A +  +A ++  +MR RGI P    YN L++G      
Sbjct: 281 MMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAK 340

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L  A  L   +  +  LP+T ++ ++I G C NG  ++A  LF  M K G   +   +N 
Sbjct: 341 LQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNF 400

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKN-----PTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
           +I G  K      A +LF +M+ GKN     P +F              + + ++   C 
Sbjct: 401 MIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMF--------------TYEILISSLCK 446

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
              + +A+K+L  + + G +P +  +  L++   + G ++ A +L+KE+     +    +
Sbjct: 447 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGS 506

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
              L++G+ R    ++A     QM   G  P    Y  L+   C           W    
Sbjct: 507 SNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC-----------W---- 551

Query: 594 RDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKL---NDFQLA-PYTIWL 642
               G+ D++ K +EE ++ G+  EN  QGL ++   L    DFQ A  +  WL
Sbjct: 552 ---QGKADQARKLVEELVRDGKRPEN--QGLRQLLGALCAQGDFQGAYEFYCWL 600



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 258/580 (44%), Gaps = 81/580 (13%)

Query: 90  RSGNVSVVSDVFF---------------VLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           ++GNVS   DVF                VL+SG ++     +A E F  M    C+PDV 
Sbjct: 91  KTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVV 150

Query: 135 IYNAVLN-----IAFRKQLFLL------------------------------ALAVYYEM 159
            YN ++          + +FLL                              A  V+ +M
Sbjct: 151 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C      +S+L N L ++GK   A ++  +M ++ +     TY++V+ GL +++  
Sbjct: 211 AEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGG 270

Query: 220 D-EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           + EA +L  +M     +PDF AY+ L+NG CK RR  EA  + +     G  P + +Y+ 
Sbjct: 271 NVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++GL    +  +A      M ++   PD   Y +MIRG    G   +A  L  DM + G
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR------DSLP--NTHTFTILICGMCR 390
           IV +T+ YN +I GF    + D+A S    ++KR      D +P  N  T+ ILI  +C+
Sbjct: 391 IVLNTWTYNFMIVGF----IKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCK 446

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
              V++A KL + M   G  PS+ ++  L+  L +AG L+ A  L+ +M       L   
Sbjct: 447 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLV-- 504

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       S   +++     G + +A   L Q+ ++G +PD  TY+ L+ G C  G
Sbjct: 505 -----------GSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 553

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
             + A KL +EL   G RP++     L+  L      + A+  +  +P  G   +  ++ 
Sbjct: 554 KADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHN 613

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           +L+T  C  RK       +L  +    G  D  ++ IE+F
Sbjct: 614 TLVTSCCLARKLD-----YLDMIEQREGVPDVIVERIEKF 648



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 236/505 (46%), Gaps = 18/505 (3%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M + G+ PN   Y  +IS LC+     EA   +LK     C+P+ V+YN +++G+CK R 
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARN 59

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +++ALA LR  E+ G  P   +YS ++    +     +A   + +M  +  EPD+V + V
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++ GL  A K+ +A +L   M  RG  PD   YN +I G C    LD+A  L   + + D
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P   T+T LI  +C+   +  A ++F KM +  C  +   ++ L + L +AG+L +A+
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            ++  M   KN  +            +  SL  +       G +  A K++ ++      
Sbjct: 240 RVYSDM-CRKNVCM----------TDNTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIA 287

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD   Y+ LING CK      A ++F+E++ +G+ P  VTY TL+ GL    + +DA  +
Sbjct: 288 PDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL 347

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQ 612
              M   G  P    Y  ++   C     + A+ L+   ++D    +  +    I  F++
Sbjct: 348 TYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIK 407

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
                +A      M    ND   AP    Y I +  LC+  QV+EA  + S + +   + 
Sbjct: 408 DEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 467

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVF 693
           +      L+  L + G LD A +++
Sbjct: 468 SLKIWEVLLSRLARAGRLDDAFELY 492



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 162/630 (25%), Positives = 284/630 (45%), Gaps = 71/630 (11%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M++    PN + ++ LI+ L K+G    A   L  M Q    PN  +Y I+I G C+   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++A     +M++ G  P   AY++++  FCK   V +A+ +       G  P + +++ 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+ GL+RA++  EA   +R M     +PDVV Y  MI GL +  K+ +A+ LL  M++  
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 339 IVPDTYCYNALIKGFCDL-----------------------------------GLLDQAR 363
           + P    Y  LI   C                                     G L +A 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCR-NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            +  ++ +++     +T+++++ G+ + +G   +A KL  +M      P    ++ LI+G
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 423 LCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           LCKA    +A  +F +M   G +PT+               +  T++E   +   +  A 
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTV--------------VTYNTLLEGLLSTAKLQDAM 345

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           ++   + + G LPD  +YN +I GFC  G+ N A  LF+++   G+  ++ TY  +I G 
Sbjct: 346 ELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGF 405

Query: 542 QRVDREEDAFRIFGQMP--QNGCTPSPAV--YKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
            + +    A+ +F +M   +N   P+P +  Y+ L++  C+  +   AF L L  +RD  
Sbjct: 406 IKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKL-LSAMRDKG 464

Query: 598 GRDDESMKSIEEFLQK----GEVENAIQGLLEMDFKLNDFQL-APYTIWLIGLCQDGQVK 652
                S+K  E  L +    G +++A +   EM  ++N  QL     I L G+ + G V 
Sbjct: 465 FV--PSLKIWEVLLSRLARAGRLDDAFELYKEMS-RINCQQLVGSSNILLDGILRRGSVD 521

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           EA +    + +   +    +  KL+ GLC +G  D A  +    +++G   RP   N  L
Sbjct: 522 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG--KRPE--NQGL 577

Query: 713 RSLL--FSKDNKKVHAYHLLCRMKSVGYDL 740
           R LL           AY   C + SVG ++
Sbjct: 578 RQLLGALCAQGDFQGAYEFYCWLPSVGVEV 607



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 208/469 (44%), Gaps = 25/469 (5%)

Query: 83  WQTLDE-------LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
           W+ LDE       ++  +VS     +  LI    K    ++A E F KM E  C      
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPA 221

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK-SGKTEVAIKMLDEM 194
           Y+ + N   R    + A  VY +M + N      T+SL++ GLSK  G    A K++ EM
Sbjct: 222 YSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEM 281

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             + I P+ + Y+I+I+GLC+  R  EA  +F +M+  G SP  V YN LL G     ++
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            +A+ L       G +P   SY+ +I G       +EAY  ++ M ++ I  +   Y  M
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401

Query: 315 IRGLSEAGKVKDAMKLLSDMR----ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           I G  +      A  L   M+    ++   P+ + Y  LI   C    +++A  L   + 
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +  +P+   + +L+  + R G +DDA +L+ +M +  C   VG  N L+DG+ + G ++
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 521

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A               FL+       V DK +   +V   C  G   +A K++ +L   
Sbjct: 522 EAK-------------DFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 568

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           G  P+      L+   C  G+  GA + +  L   G+      + TL+ 
Sbjct: 569 GKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVT 617


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/714 (24%), Positives = 330/714 (46%), Gaps = 62/714 (8%)

Query: 56  KRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           +R + R +F++ + +I  L +    +   + L +++     V   +F  L+    + G  
Sbjct: 171 RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 230

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL    ++K    +PD+ +YN  ++   +     +A   ++E+      P+ V+++ +
Sbjct: 231 ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  L K+G+   A ++  +M     +P  + Y  +I G     R ++AY+L  ++++ GC
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 350

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  V++N++L    K R+VDEAL+L    +KD   P   +Y+ +ID L    R +EAY 
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYR 409

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M    + P+++   +M+  L +A K+++A K+     +RG  PD   Y +LI G  
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +D+A  L  ++       N   +T LI     +G  +D  K+F ++ + GC P + 
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLT 529

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLSQGG------NRVH-- 459
           + N  +D + KAGE+EK  ++F  +       ++     L   L++ G      N  H  
Sbjct: 530 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 589

Query: 460 -------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +   +V+ +C +G +HKAY+IL ++ E    P + TY ++++G  K+  +
Sbjct: 590 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 649

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A  LF+E + KG+  + V Y +LI+G  +V R ++A+ I  +M + G TP+   + SL
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +                            +++   EE     E     Q + EM    N 
Sbjct: 710 L----------------------------DALVKAEEI---NEALVCFQSMKEMKCPPNT 738

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           +    Y+I + GLC+  +  +A   +  + +   +    +   +I GL K G +  A  +
Sbjct: 739 YT---YSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL--CRMKSVGYDLDACL 744
           F     NG I      N L+  +  S  N+ + AY +    R++    ++ +C+
Sbjct: 796 FERFKANGGIPDAASFNALIEGM--SNANRAMEAYQVFEETRLRGCRINIKSCI 847



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 273/588 (46%), Gaps = 62/588 (10%)

Query: 189 KMLDEMTQRGI-LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           K+L+EM   G  LPN+    +  + L +  R D+A      M+     P F AY  L+  
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLA-AALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
             + RR + AL LLR  ++ G+   +  ++ L+  L R  +  +A A   ++    +EPD
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +VLY V I    +AG V  A K   +++ +G+ PD   Y ++I   C  G L +A  L  
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++    S+P  + +  +I G    G  +DA KL  ++ + GC PSV  FN+++  L K  
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++++A  LF  M+    P              + ++   +++  C  G + +AY+IL ++
Sbjct: 369 KVDEALSLFEVMKKDAEP--------------NSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +   P+++T N +++  CK   +  A K+F+    +G  PD VTY +LI+GL +  + 
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           ++A+R+F +M   G   +P VY SL+      R F             I GR ++  K  
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLI------RNFF------------IHGRKEDGHKIF 516

Query: 608 EEFLQK-------------------GEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLC 646
           +E +++                   GEVE     ++  D +   F   +  Y+I + GL 
Sbjct: 517 KELIRRGCKPDLTLLNTYMDCVFKAGEVEKG--RMIFEDIRSYGFLPDVRSYSILIHGLT 574

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + GQ +E  NIF  + +    +   +   ++ G CK G +  A ++ L  +K   + +P 
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI-LEEMKEKCV-QPT 632

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           V  Y       +K ++   AY L    KS G +L+  LY    SL+ G
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY---SSLIDG 677



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 239/531 (45%), Gaps = 62/531 (11%)

Query: 79  FDLYWQTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           F+  ++ L+ LR      SVVS  F  +++   K    ++AL  F  MK+ D +P+   Y
Sbjct: 335 FEDAYKLLERLRERGCIPSVVS--FNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTY 391

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N ++++         A  +  EM   +  PN++T +++++ L K+ K E A K+ +  +Q
Sbjct: 392 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 451

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG----------------------- 233
           RG  P+  TY  +I GL +  + DEAYRLF KM D+G                       
Sbjct: 452 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 511

Query: 234 ------------CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
                       C PD    N  ++   K   V++   +       GF+P + SYS LI 
Sbjct: 512 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 571

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +A +  E    +  M ++    D   Y  ++ G  ++GKV  A ++L +M+E+ + P
Sbjct: 572 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 631

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               Y A++ G   +  LD+A  L  E   +    N   ++ LI G  + G +D+A  + 
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT--------------- 446
            +M K G  P+V  +N+L+D L KA E+ +A + F  M+  K P                
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751

Query: 447 -------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                  +F +  Q    V +  +  TM+      G I  AY +  +   +G +PD  ++
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           N+LI G         A ++F+E +L+G R +  +  +L++ L + +  E A
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 210/444 (47%), Gaps = 9/444 (2%)

Query: 2   SSTLNEVLTILDTVTPIEPALE--------PLLP-FLSKTTVTSVIMKTKNPQVGFRFFI 52
           SST N ++ +L     +E A           L P  L+   +   + K +  +  ++ F 
Sbjct: 388 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 447

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            A++R       +  ++I  L K    D  ++  +++     +    V+  LI  ++  G
Sbjct: 448 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 507

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E   + F ++    C+PD+ + N  ++  F+         ++ ++     LP++ ++S
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI+GL+K+G+      +   M Q+G   +   Y  V+ G C+  +  +AY +  +MK+ 
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
              P    Y A+++G  K+ R+DEA  L    +  G    +  YS LIDG  +  R DEA
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           Y    +M ++ + P+V  +  ++  L +A ++ +A+     M+E    P+TY Y+ LI G
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 747

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C +   ++A     ++ K+  +PN  T+T +I G+ + G + DA  LF + +  G  P 
Sbjct: 748 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 807

Query: 413 VGMFNALIDGLCKAGELEKANLLF 436
              FNALI+G+  A    +A  +F
Sbjct: 808 AASFNALIEGMSNANRAMEAYQVF 831



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 119/231 (51%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           + A+  A++  L K +  D  +   +E +S  + +   ++  LI G+ KVG  ++A    
Sbjct: 632 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 691

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M +    P+VY +N++L+   + +    AL  +  M ++ C PN  T+S+LINGL + 
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            K   A     +M ++G++PN  TYT +ISGL ++    +AY LF + K +G  PD  ++
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           NAL+ G     R  EA  +       G    + S   L+D L +++  ++A
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 276/587 (47%), Gaps = 20/587 (3%)

Query: 8   VLTILDTVTPIEP--ALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL-RSFA 64
           +L  L+     EP   LE L   L    V  V+    + +   RF+ WA  R     S  
Sbjct: 65  ILQALERSMCSEPLVELERLDVELDPIVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQF 124

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + + ++S+L     F L  + L  ++S  V++   ++ +L+SGY + G  +  +E+F +M
Sbjct: 125 AIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEM 184

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSG 182
               C+     YN  + +  +   F L +  YY+M   K  CL    T+S  I+ L +S 
Sbjct: 185 VMSGCREFGVDYNRYIGVLVKNCCFDL-VEKYYDMALAKGFCLTPF-TYSRWISALCQSN 242

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           + E+  ++L +M + G  P+ +   I I  LC+ NR  +A ++  KM+  G SPD V Y 
Sbjct: 243 RIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQ 302

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++G C  ++  EA+ L     K    P + S   LI GL +  + DEA+    +M   
Sbjct: 303 TVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTL 362

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            IE  V +Y  +I G   AG +  A K++S MR  G  PD   YN L+  +C +G++++A
Sbjct: 363 DIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKA 422

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++      P+ +++  L+ G+C+   +D A    +   + G F      N LID 
Sbjct: 423 EKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDA 482

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            CK  +++ A  LF +M               G +  D  +  T++    + G  + A +
Sbjct: 483 FCKTKKVKSALELFKEM------------GYKGMQA-DAVTYGTLINGLFSVGYYNLAEE 529

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  Q+  +   P++  YN +++  CKVG+   A  +F  +  K + PD+VT+ TLI  L 
Sbjct: 530 LFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLG 589

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +  R  +A  +F  M   G  P    +K L++      K +LA+ +W
Sbjct: 590 KRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVW 636



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 189/409 (46%), Gaps = 6/409 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY--KVGDCEKALESFGKM 124
           S  IS L + N  +L  + L ++     S   D++   I  YY  K      AL+   KM
Sbjct: 232 SRWISALCQSNRIELVQELLVDMDKLGCS--PDIWACNIYIYYLCKQNRLPDALQMVEKM 289

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +     PDV  Y  V++     + F  A+ ++ EMVK +  P++ +   LI GL K+ K 
Sbjct: 290 RTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKV 349

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++   M    I  +   Y  +ISG  +    D+AY++   M+ +GC PD V YN L
Sbjct: 350 DEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNIL 409

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           LN +C +  +++A  L+R  E  G  P   SY+ L+ GL +  + D+A+A+     E   
Sbjct: 410 LNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGG 469

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             D V   ++I    +  KVK A++L  +M  +G+  D   Y  LI G   +G  + A  
Sbjct: 470 FCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEE 529

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++      PN + + I++  +C+ G    AQ +F+ M +    P    FN LI  L 
Sbjct: 530 LFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLG 589

Query: 425 KAGELEKANLLFYKMEI-GKNP-TLFLRLSQGGNRVHDKASLQTMVEQY 471
           K     +A  LF  M   G  P TL  +    G     K++L   V +Y
Sbjct: 590 KRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEY 638



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 127/600 (21%), Positives = 236/600 (39%), Gaps = 60/600 (10%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQI 216
           E+ +L+   + +  +L++ GLS S   E A++       R G   ++F    ++S L   
Sbjct: 80  ELERLDVELDPIVVNLVVRGLSDS---ETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMD 136

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                      ++K  G +     Y  LL+G+ +  + D  +         G       Y
Sbjct: 137 GNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDY 196

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           +  I  L +   +D    +Y     +        Y   I  L ++ +++   +LL DM +
Sbjct: 197 NRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDK 256

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  PD +  N  I   C    L  A  +  ++  + + P+  T+  ++ G+C N    +
Sbjct: 257 LGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAE 316

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  L+ +M K    P V    ALI GLCK  ++++A  L  +M      TL + LS    
Sbjct: 317 AIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRM-----LTLDIELS---- 367

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                                                  +  YN+LI+GF + G+I+ A 
Sbjct: 368 ---------------------------------------VCIYNALISGFWRAGSIDKAY 388

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           K+   ++  G  PD VTY  L+N    +   E A ++  +M  +G  P    Y  L+   
Sbjct: 389 KIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGL 448

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           C+  +   AF+    ++ ++ G  D    +I  + F +  +V++A++   EM +K     
Sbjct: 449 CKTHQLDKAFAFVSDHM-EVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQAD 507

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y   + GL   G    A  +F  ++  +          ++H LCK G+   A  +F 
Sbjct: 508 AVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFS 567

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           + ++    + P    +        K ++ + A +L   M++ G + D   +   K L+ G
Sbjct: 568 HMIQKE--VSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTF---KYLISG 622



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/179 (20%), Positives = 82/179 (45%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           KTK  +     F     +       +   +I+ L     ++L  +  +++ +  +    +
Sbjct: 485 KTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVN 544

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +++    KVG  ++A   F  M + +  PD   +N ++    ++   + AL ++ +M
Sbjct: 545 LYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDM 604

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
                 P+ +TF  LI+GL   GK+ +A ++ + M + GI+ ++     +IS L   N+
Sbjct: 605 RTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKSKNK 663



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 51/259 (19%), Positives = 97/259 (37%), Gaps = 41/259 (15%)

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  L++G+ + G  +  ++ F E+ + G R   V Y   I  L +    +   + +    
Sbjct: 161 YRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMAL 220

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVE 617
             G   +P  Y   ++  C+  +  L   L +   +     D  +      +L ++  + 
Sbjct: 221 AKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLP 280

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           +A+Q + +M  K     +  Y   + GLC + +  EA+ ++  +V+        SC  LI
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALI 340

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            GLCK                                     +NK   A+ L  RM ++ 
Sbjct: 341 FGLCK-------------------------------------NNKVDEAFELASRMLTLD 363

Query: 738 YDLDACLYPKTKSLLPGPW 756
            +L  C+Y    +L+ G W
Sbjct: 364 IELSVCIY---NALISGFW 379


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 181/729 (24%), Positives = 331/729 (45%), Gaps = 73/729 (10%)

Query: 29  LSKTTVTSVIM-----KTKNPQVGFRFFIWAAKRKRLRSFASNSAVI-SMLLKPNGFDLY 82
           LS T+ T  I+     +   P++   FF      + LR+     A+I S LLK  GF   
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFF-----GQLLRTGLRVDAIIASHLLK--GFCEA 161

Query: 83  WQTLDEL-----RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFD--CQPDV 133
            +T + L     R+  +  V DVF   +L+      G   +A +    M E    C PDV
Sbjct: 162 KRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDV 221

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             YN V++  F++     A  ++ EMV+    P++VT+S +++ L K+   + A   L +
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  +G+LP+ +TY  +I G     +  EA R+F +M+     PD VA N L+   CK  +
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + EA  +  +    G  P + SY+ +++G        +    +  M  + I P +  + V
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I+  +  G +  AM + ++MR+ G+ P    Y  +I   C +G +D A     ++  + 
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            +P+ + +  LI G C +G +  A++L +++   G    +  F ++I+ LCK G +  A 
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521

Query: 434 LLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F   + +G +P              D      +++ YC  G + KA ++   +  +G 
Sbjct: 522 NIFDLTVNVGLHP--------------DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P+++ Y +L+NG+CK+G I+  L LF+E+  KG++P ++ Y  +I+GL    R   A  
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F +M ++G   +   Y  ++    + R F  A  L+ +                     
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKE--------------------- 666

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
                     L  M+ K++   L      + G+ Q  +V+EA ++F+ +     +    +
Sbjct: 667 ----------LRAMNVKIDIITL---NTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVT 713

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              +I  L K G ++ A D+F      G     R+ N+++R LL  K N+ V A   L +
Sbjct: 714 YSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL--KKNEIVRAGAYLSK 771

Query: 733 MKSVGYDLD 741
           +    + L+
Sbjct: 772 IDERNFSLE 780



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 253/561 (45%), Gaps = 35/561 (6%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P  +TY I++    + +R + A   F ++  +G   D +  + LL GFC+ +R DE
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI--EPDVVLYGV 313
           AL  LL    + G VP + SY+ L+  L    +  +A    R M E      PDVV Y  
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   Y++++   C    +D+A +   ++  + 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LP+  T+  LI G    G   +A ++F +M +    P V   N L+  LCK G++++A 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 347 DVFDTMAMKGQNPDVF--------------SYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P I T+N LI  +   G ++ A+ +F E++  G++P  VTY T+I  L R+ + +DA  
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           K G V +A Q + ++   +    L P    Y + + G C  G++++AL +F  +V     
Sbjct: 513 KLGRVMDA-QNIFDLTVNVG---LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-- 566

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              P+ V    L++G CK G +D  + +F   L+ G      + N ++  L   +  + V
Sbjct: 567 -IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF--EAGRTV 623

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A      M   G  ++ C Y
Sbjct: 624 PAKVKFHEMTESGIAMNKCTY 644



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 94/188 (50%), Gaps = 1/188 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ ++I G ++ G    A   F +M E     +   Y+ VL   F+ + F  A+ ++ E+
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 667

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             +N   +I+T + +I G+ ++ + E A  +   +++ G++P   TY+I+I+ L +    
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLV 727

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  +F  M+++GC PD    N ++    K   +  A A L   ++  F     +   L
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 787

Query: 280 IDGLFRAK 287
           +D LF +K
Sbjct: 788 VD-LFSSK 794


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 226/466 (48%), Gaps = 22/466 (4%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + D+Y    ++N   RK+  L A +V     KL   P+ +TFS L+NG    G+   A+ 
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++D M +    P+  T + +I+GLC   R  EA  L  +M + G  PD V Y  +LN  C
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K      AL L R  E+      +  YS +ID L +   +D+A + + +M  + I+ DVV
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I GL   GK  D  K+L +M  R I+PD   ++ALI  F   G L +A+ L  E+
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             R   P+T T+  LI G C+   + +A ++F+ M   GC P +  ++ LI+  CKA  +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401

Query: 430 EKANLLFYKMEI-GKNP------TLFLRLSQGGNRVHDKASLQTMVEQ------------ 470
           +    LF ++   G  P      TL L   Q G     K   Q MV +            
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461

Query: 471 ---YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
               C  G ++KA +I  ++ +S     I  YN +I+G C    ++ A  LF  L  KG+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +PD VTY  +I GL +     +A  +F +M ++GCTP    Y  L+
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 219/439 (49%), Gaps = 13/439 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G+   G   +A+    +M E   +PD+   + ++N    K     AL +   M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P+ VT+  ++N L KSG + +A+ +  +M +R I  +   Y+IVI  LC+    
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  LF +M+  G   D V Y++L+ G C   + D+   +LR       +P + ++S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +  +  EA   Y +M    I PD + Y  +I G  +   + +A ++   M  +G 
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y+ LI  +C    +D    L  EI  +  +PNT T+  L+ G C++G ++ A++
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF +M   G  PSV  +  L+DGLC  GEL KA  +F KM+         R++ G     
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS-------RMTLG----- 489

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  ++   C A  +  A+ +   L++ G  PD++TYN +I G CK G+++ A  LF
Sbjct: 490 -IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548

Query: 520 KELQLKGLRPDSVTYGTLI 538
           ++++  G  PD  TY  LI
Sbjct: 549 RKMKEDGCTPDDFTYNILI 567



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 229/446 (51%), Gaps = 15/446 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+G    G   +AL    +M E+  QPD   Y  VLN   +     LAL ++ +M + 
Sbjct: 180 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N   ++V +S++I+ L K G  + A+ + +EM  +GI  +  TY+ +I GLC   + D+ 
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++  +M      PD V ++AL++ F K  ++ EA  L       G  P   +Y+ LIDG
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +     EA   +  M  +  EPD+V Y ++I    +A +V D M+L  ++  +G++P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN L+ GFC  G L+ A+ L  E+  R   P+  T+ IL+ G+C NG ++ A ++F 
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           KM+K+     +G++N +I G+C A +++ A             +LF  LS  G +  D  
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDA------------WSLFCSLSDKGVK-PDVV 526

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C  G + +A  +  ++ E G  PD  TYN LI        +  +++L +E+
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586

Query: 523 QLKGLRPDSVTYGTLINGL--QRVDR 546
           ++ G   DS T   +I+ L  +R+D+
Sbjct: 587 KVCGFSADSSTIKMVIDMLSDRRLDK 612



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 272/594 (45%), Gaps = 55/594 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  M++   LP  + F+ L + ++++ + ++ +     M   GI  + +T TI+I+
Sbjct: 54  AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  +   A+ +  +    G  PD + ++ L+NGFC   RV EA+AL+    +    P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L + S LI+GL    R  EA     +M E   +PD V YG ++  L ++G    A+ L 
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M ER I      Y+ +I   C  G  D A SL  E+  +    +  T++ LI G+C +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G  DD  K+  +M      P V  F+ALID   K G+L +A  L+ +M           +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-----------I 342

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           ++G     D  +  ++++ +C    +H+A ++   +   G  PDI+TY+ LIN +CK   
Sbjct: 343 TRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++  ++LF+E+  KGL P+++TY TL+ G  +  +   A  +F +M   G  PS   Y  
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C                                    GE+  A++   +M     
Sbjct: 461 LLDGLC----------------------------------DNGELNKALEIFEKMQKSRM 486

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDL 688
              +  Y I + G+C   +V +A ++F  L + K +   P  V    +I GLCK+G L  
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGV--KPDVVTYNVMIGGLCKKGSLSE 543

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           A  +F    ++G        N L+R+ L    +  + +  L+  MK  G+  D+
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHL--GGSGLISSVELIEEMKVCGFSADS 595



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 4/419 (0%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           ++E L ++D +  +E   +P    ++   V + + K+ N  +    F    +R    S  
Sbjct: 191 VSEALVLIDRM--VEYGFQP--DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
             S VI  L K   FD      +E+    +      +  LI G    G  +   +   +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
              +  PDV  ++A++++  ++   L A  +Y EM+     P+ +T++ LI+G  K    
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A +M D M  +G  P+  TY+I+I+  C+  R D+  RLF ++   G  P+ + YN L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + GFC+  +++ A  L +     G  P + +Y  L+DGL      ++A   + KM + ++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
              + +Y ++I G+  A KV DA  L   + ++G+ PD   YN +I G C  G L +A  
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           L  ++ +    P+  T+ ILI        +  + +L  +M+  G          +ID L
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/651 (26%), Positives = 293/651 (45%), Gaps = 19/651 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L ++    V   +  +  L++ Y K G  + A +    M       DV  YN  ++   R
Sbjct: 198 LRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCR 257

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                    +   M +    PN +T++ LI+G  + GK EVA K+ DEM+   +LPN  T
Sbjct: 258 DSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSIT 317

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I+G C      EA RL   M   G  P+ V Y ALLNG  K        ++L    
Sbjct: 318 YNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMR 377

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G      SY+ +IDGL +    +EA      M +  + PDVV + V+I G    GK+ 
Sbjct: 378 MGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKIN 437

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +++  M + G+VP+   Y+ LI  +C +G L +A +    +     + +  T  +L+
Sbjct: 438 NAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLV 497

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
              CR G +++A+   N M + G  P+   F+ +I+G   +G+  KA  +F KM   G  
Sbjct: 498 ATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHF 557

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P+LF   + GG           +++  C  G I++A K   +L    N  D + +N+ + 
Sbjct: 558 PSLF---TYGG-----------LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLT 603

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CT 563
             C+ GN++ A+ L  E+      PD+ TY  LI GL +  +   A  + G+  + G  +
Sbjct: 604 STCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLS 663

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQG 622
           P+PAVY SL+    +      A  ++ + L +D+          I+++ +KG+       
Sbjct: 664 PNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDI 723

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L  M  K   F LA Y I L G  +   +     ++  ++    +    S   LI G C+
Sbjct: 724 LSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQ 783

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
               D+A+ +  +    G ++     N L+    F + N+   A+ L+ +M
Sbjct: 784 SKSFDVAIKILRWITLEGHVIDRFTFNMLITK--FCERNEMKKAFELVKQM 832



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/594 (26%), Positives = 266/594 (44%), Gaps = 34/594 (5%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C  +  +++ ++ +  R ++   A+  +Y M      P++ T ++++  L K  K ++  
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
                M  +GI P+  T+ I+++ LC+  +   A  L  KM++SG  P  V YN LLN +
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  R   A  L+      G    + +Y+  ID L R  R  + Y   ++M    + P+ 
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  +I G    GK++ A K+  +M    ++P++  YN LI G C  G + +A  L   
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN  T+  L+ G+ +N        +  +M   G   S   + A+IDGLCK G 
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGM 400

Query: 429 LEKA-NLLFYKMEIGKNPTL---------FLRLSQGGNR------------VHDKASLQT 466
           LE+A  LL   +++  NP +         F R+ +  N             V +     T
Sbjct: 401 LEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYST 460

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++  YC  G + +A      +  SG++ D  T N L+  FC+ G +  A      +   G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           L P+SVT+  +ING         AF +F +M   G  PS   Y  L+   C     + A 
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEAL 580

Query: 587 SLWLQYLRDISGRDDESM--KSIEEFLQKGEVENAIQGLLEM---DFKLNDFQLAPYTIW 641
             +   LR I    D  +    +    + G + +AI  + EM   DF  ++F    YT  
Sbjct: 581 K-FFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF---TYTNL 636

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVF 693
           + GLC+ G++  AL +    +E K +++P   V   L+ GL K G+   A+ +F
Sbjct: 637 IAGLCKKGKIVAALLLSGKAIE-KGLLSPNPAVYTSLVDGLLKHGHARAALYIF 689



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 160/653 (24%), Positives = 280/653 (42%), Gaps = 30/653 (4%)

Query: 68   AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            A+++ L K   F +    L+ +R G V V    +  +I G  K G  E+A++    M + 
Sbjct: 355  ALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKV 414

Query: 128  DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
               PDV  ++ ++N  FR      A  +  +M K   +PN + +S LI    K G  + A
Sbjct: 415  SVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA 474

Query: 188  IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            +     M   G + + FT  ++++  C+  + +EA      M   G  P+ V ++ ++NG
Sbjct: 475  LNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIING 534

Query: 248  FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            +       +A ++       G  P L +Y  L+ GL      +EA  ++ ++       D
Sbjct: 535  YGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVD 594

Query: 308  VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
             V++   +     +G + DA+ L+++M     +PD + Y  LI G C  G +  A  L  
Sbjct: 595  NVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSG 654

Query: 368  EIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            +  ++  L PN   +T L+ G+ ++G    A  +F +M      P    FN +ID   + 
Sbjct: 655  KAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRK 714

Query: 427  GELEKANLLFYKMEIGK---NPTLFLRLSQGGNRVH-------------------DKASL 464
            G+  K N +   M+      N   +  L  G  + H                   DK S 
Sbjct: 715  GKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSW 774

Query: 465  QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++  YC +     A KIL  +   G++ D  T+N LI  FC+   +  A +L K++  
Sbjct: 775  HSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQ 834

Query: 525  KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
              + P+  TY  L NGL R      A R+   + ++G  P+   Y +L+   CR      
Sbjct: 835  FMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKG 894

Query: 585  AFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGL---LEMDFKLNDFQLAPYTI 640
            A  L  +         + +M +I   L   + +ENAI  L   LEM        +A +T 
Sbjct: 895  AMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP---TVATFTT 951

Query: 641  WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             +   C++  V +AL + S++  C   +   +   LI GLC  G ++ A  ++
Sbjct: 952  LMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLY 1004



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 248/559 (44%), Gaps = 55/559 (9%)

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY--------------------- 136
            S  F  +I+GY   GD  KA   F KM  F   P ++ Y                     
Sbjct: 525  SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584

Query: 137  ------NAVLNIAFRKQLFLL--------ALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
                  NAV N+ F  +L           A+A+  EMV  + LP+  T++ LI GL K G
Sbjct: 585  RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG 644

Query: 183  KTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            K   A+ +  +  ++G+L PN   YT ++ GL +   A  A  +F +M +    PD VA+
Sbjct: 645  KIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            N +++ + +  +  +   +L + +       L +Y+ L+ G  +       +  Y+ M  
Sbjct: 705  NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIR 764

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                PD   +  +I G  ++     A+K+L  +   G V D + +N LI  FC+   + +
Sbjct: 765  HGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            A  L  ++ +   +PN  T+  L  G+ R      A ++   + ++G  P+   +  LI+
Sbjct: 825  AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884

Query: 422  GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            G+C+ G ++ A  L  +M+     TL       G   H+ A +  +V     +  I  A 
Sbjct: 885  GMCRVGNIKGAMKLQDEMK-----TL-------GISSHNVA-MSAIVRGLANSKKIENAI 931

Query: 482  KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
             +L  + E   +P + T+ +L++ +CK  N+  AL+L   ++   ++ D V Y  LI+GL
Sbjct: 932  WVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGL 991

Query: 542  QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
                  E AF+++ +M Q    P+ ++Y  L+   C       +  L    LRDI  +D 
Sbjct: 992  CANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKL----LRDI--QDR 1045

Query: 602  ESMKSIEEFLQKGEVENAI 620
            E M+  ++F      + A+
Sbjct: 1046 ELMRLNQQFCYSSRCDIAV 1064



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 176/373 (47%), Gaps = 1/373 (0%)

Query: 64   ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            A  ++++  LLK           +E+ + +V   +  F V+I  Y + G   K  +    
Sbjct: 667  AVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 124  MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
            MK  +   ++  YN +L+   ++        +Y +M++   LP+  ++  LI G  +S  
Sbjct: 727  MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 184  TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
             +VAIK+L  +T  G + ++FT+ ++I+  C+ N   +A+ L  +M      P+   YNA
Sbjct: 787  FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 244  LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            L NG  +     +A  +L+   + G VP    Y  LI+G+ R      A     +M    
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 304  IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            I    V    ++RGL+ + K+++A+ +L  M E  I+P    +  L+  +C    + +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 364  SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
             L+  +       +   + +LI G+C NG ++ A KL+ +M++   +P+  ++  LID  
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026

Query: 424  CKAG-ELEKANLL 435
            C    ++E   LL
Sbjct: 1027 CAGNYQIESEKLL 1039



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 7/174 (4%)

Query: 87   DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
            DE+++  +S  +     ++ G       E A+     M E    P V  +  ++++  ++
Sbjct: 900  DEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKE 959

Query: 147  QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                 AL +   M   +   ++V +++LI+GL  +G  E A K+ +EM QR + PN   Y
Sbjct: 960  ANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIY 1019

Query: 207  TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
             ++I   C  N   E+ +L   ++D     + +  N     FC   R D A+ L
Sbjct: 1020 IVLIDSFCAGNYQIESEKLLRDIQDR----ELMRLN---QQFCYSSRCDIAVVL 1066


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 233/472 (49%), Gaps = 13/472 (2%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + D+Y    ++N   RK+  L A +V     KL   P+ +TFS L+NG    G+   A+ 
Sbjct: 131 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 190

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++D M +    P+  T + +I+GLC   R  EA  L  +M + G  PD V Y  +LN  C
Sbjct: 191 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 250

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K      AL L R  E+      +  YS +ID L +   +D+A + + +M  + I+ DVV
Sbjct: 251 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 310

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I GL   GK  D  K+L +M  R I+PD   ++ALI  F   G L +A+ L  E+
Sbjct: 311 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 370

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             R   P+T T+  LI G C+   + +A ++F+ M   GC P +  ++ LI+  CKA  +
Sbjct: 371 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 430

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +    LF ++            S+G   + +  +  T+V  +C +G ++ A ++  ++  
Sbjct: 431 DDGMRLFREIS-----------SKG--LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 477

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P ++TY  L++G C  G +N AL++F+++Q   +      Y  +I+G+    + +D
Sbjct: 478 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 537

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
           A+ +F  +   G  P    Y  ++   C++   S A  L+ +   D    DD
Sbjct: 538 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 589



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 219/439 (49%), Gaps = 13/439 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L++G+   G   +A+    +M E   +PD+   + ++N    K     AL +   M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P+ VT+  ++N L KSG + +A+ +  +M +R I  +   Y+IVI  LC+    
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  LF +M+  G   D V Y++L+ G C   + D+   +LR       +P + ++S L
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +  +  EA   Y +M    I PD + Y  +I G  +   + +A ++   M  +G 
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y+ LI  +C    +D    L  EI  +  +PNT T+  L+ G C++G ++ A++
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF +M   G  PSV  +  L+DGLC  GEL KA  +F KM+         R++ G     
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS-------RMTLG----- 518

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  ++   C A  +  A+ +   L++ G  PD++TYN +I G CK G+++ A  LF
Sbjct: 519 -IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 577

Query: 520 KELQLKGLRPDSVTYGTLI 538
           ++++  G  PD  TY  LI
Sbjct: 578 RKMKEDGCTPDDFTYNILI 596



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 229/446 (51%), Gaps = 15/446 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+G    G   +AL    +M E+  QPD   Y  VLN   +     LAL ++ +M + 
Sbjct: 209 TLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 268

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N   ++V +S++I+ L K G  + A+ + +EM  +GI  +  TY+ +I GLC   + D+ 
Sbjct: 269 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 328

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++  +M      PD V ++AL++ F K  ++ EA  L       G  P   +Y+ LIDG
Sbjct: 329 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 388

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +     EA   +  M  +  EPD+V Y ++I    +A +V D M+L  ++  +G++P+
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 448

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN L+ GFC  G L+ A+ L  E+  R   P+  T+ IL+ G+C NG ++ A ++F 
Sbjct: 449 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 508

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           KM+K+     +G++N +I G+C A +++ A             +LF  LS  G +  D  
Sbjct: 509 KMQKSRMTLGIGIYNIIIHGMCNASKVDDA------------WSLFCSLSDKGVK-PDVV 555

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C  G + +A  +  ++ E G  PD  TYN LI        +  +++L +E+
Sbjct: 556 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615

Query: 523 QLKGLRPDSVTYGTLINGL--QRVDR 546
           ++ G   DS T   +I+ L  +R+D+
Sbjct: 616 KVCGFSADSSTIKMVIDMLSDRRLDK 641



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 272/594 (45%), Gaps = 55/594 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  M++   LP  + F+ L + ++++ + ++ +     M   GI  + +T TI+I+
Sbjct: 83  AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 142

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  +   A+ +  +    G  PD + ++ L+NGFC   RV EA+AL+    +    P
Sbjct: 143 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 202

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L + S LI+GL    R  EA     +M E   +PD V YG ++  L ++G    A+ L 
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M ER I      Y+ +I   C  G  D A SL  E+  +    +  T++ LI G+C +
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G  DD  K+  +M      P V  F+ALID   K G+L +A  L+ +M           +
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-----------I 371

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           ++G     D  +  ++++ +C    +H+A ++   +   G  PDI+TY+ LIN +CK   
Sbjct: 372 TRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++  ++LF+E+  KGL P+++TY TL+ G  +  +   A  +F +M   G  PS   Y  
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C                                    GE+  A++   +M     
Sbjct: 490 LLDGLC----------------------------------DNGELNKALEIFEKMQKSRM 515

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDL 688
              +  Y I + G+C   +V +A ++F  L + K +   P  V    +I GLCK+G L  
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGV--KPDVVTYNVMIGGLCKKGSLSE 572

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           A  +F    ++G        N L+R+ L    +  + +  L+  MK  G+  D+
Sbjct: 573 ADMLFRKMKEDGCTPDDFTYNILIRAHLGG--SGLISSVELIEEMKVCGFSADS 624



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 193/419 (46%), Gaps = 4/419 (0%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           ++E L ++D +  +E   +P    ++   V + + K+ N  +    F    +R    S  
Sbjct: 220 VSEALVLIDRM--VEYGFQP--DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 275

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
             S VI  L K   FD      +E+    +      +  LI G    G  +   +   +M
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
              +  PDV  ++A++++  ++   L A  +Y EM+     P+ +T++ LI+G  K    
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A +M D M  +G  P+  TY+I+I+  C+  R D+  RLF ++   G  P+ + YN L
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + GFC+  +++ A  L +     G  P + +Y  L+DGL      ++A   + KM + ++
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
              + +Y ++I G+  A KV DA  L   + ++G+ PD   YN +I G C  G L +A  
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           L  ++ +    P+  T+ ILI        +  + +L  +M+  G          +ID L
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 182/700 (26%), Positives = 316/700 (45%), Gaps = 71/700 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI+G  ++GD   A++   K+     +P+V +YN +++   + QL   A  ++ EM 
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                 N+VT+S LI G    GK + A+ +L+ M  + I PN  TY I++  LC+  +  
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 221 E-----------------------------------AYRLFLKMKDSGCSPDFVAYNALL 245
           E                                   A  +F  M   G +PD  +YN ++
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NGFCK++RVD+AL L +      F P +  ++ ++D   + K Y  A +   ++  + I+
Sbjct: 281 NGFCKIKRVDKALNLFKEMILSRFPPII-QFNKILDSFAKMKHYSTAVSLSHRLELKGIQ 339

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD+    ++I      G++     +L+ + +RG  P T   N LIKG C  G + +A   
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHF 399

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             ++  +    N  ++  LI G+C+ G    A KL  K++     P+V M++ +ID LCK
Sbjct: 400 HDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCK 459

Query: 426 AGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVH-------------------DKAS 463
              + +A  LF +M    I  +   +  L  G   V                    D  +
Sbjct: 460 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT 519

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +V+     G + +A  +L  + ++   PD+ TYN+L+NG+  V  +  A  +F  + 
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           L G+ PD  TY  LING  +    ++A  +F +M Q    P    Y SL+   C+  + S
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639

Query: 584 LAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP---- 637
             + L +  +RD     D    +  I+   + G ++ AI     +  K+ D  + P    
Sbjct: 640 YVWDL-IDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI----ALFNKMKDQGIRPNTFT 694

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           +TI L GLC+ G++K+A  +F  L+     +       +I+G CK+G L+ A+ +     
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           +NG I      + ++ +L    +N K  A  LL +M + G
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDK--AEKLLRQMIARG 792



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 248/499 (49%), Gaps = 20/499 (4%)

Query: 94  VSVVSDV--FFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLF 149
           + V  DV  + ++I+G+ K+   +KAL  F +M    F   P +  +N +L+   + + +
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF---PPIIQFNKILDSFAKMKHY 323

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A+++ + +      P++ T ++LIN     G+      +L ++ +RG  P+  T   +
Sbjct: 324 STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 383

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I GLC   +  +A     K+   G   + V+Y  L+NG CK+     A+ LLR  +    
Sbjct: 384 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 443

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P +  YS +ID L + +   EAY  + +M  + I  DVV Y  +I G    GK+K+A+ 
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL++M  + I PD   Y  L+      G + +A+S+   + K    P+  T+  L+ G  
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL 563

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
               V  AQ +FN M   G  P V  +  LI+G CK+  +++A  LF +M          
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM---------- 613

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                 N V D  +  ++V+  C +G I   + ++ ++ + G   D+ITYNSLI+G CK 
Sbjct: 614 ---HQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G+++ A+ LF +++ +G+RP++ T+  L++GL +  R +DA  +F  +   G      +Y
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIY 730

Query: 570 KSLMTWSCRRRKFSLAFSL 588
             ++   C++     A ++
Sbjct: 731 NVMIYGHCKQGLLEEALTM 749



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 158/612 (25%), Positives = 285/612 (46%), Gaps = 46/612 (7%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           ++L+V  +++K    P+ VT + LI GL   G+ + A+   D++  +G   N+ +Y  +I
Sbjct: 46  VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +G+C+I     A +   K+      P+   YN +++  CK + V EA  L       G  
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + +YS LI G     +  EA      M  + I P+V  Y +++  L + GKVK+A  +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L+ M +  +  +   Y+ L+ G+  +  + +A+ +   +      P+ H++ I+I G C+
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFL 449
              VD A  LF +M  +  FP +  FN ++D   K      A  L +++E+ G  P LF 
Sbjct: 286 IKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLF- 343

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +L  ++  +C  G I   + +L ++ + G  P  +T N+LI G C  
Sbjct: 344 -------------TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLK 390

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  AL    +L  +G + + V+Y TLING+ ++     A ++  ++      P+  +Y
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMY 450

Query: 570 KSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
            +++   C+ +  S A+ L+ +  ++ IS         I  F   G+++ AI  L EM  
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
           K  +  +  YTI +  L ++G+VKEA ++ +V++  KA V P                  
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVML--KACVKP------------------ 550

Query: 689 AMDVFLY-TLKNGFILRPRV--CNYLLRSLLFSKDNKKVHAYHLL----CRMKSVGYDLD 741
             DVF Y TL NG++L   V    ++  ++        VH Y +L    C+ K V   L+
Sbjct: 551 --DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALN 608

Query: 742 ACLYPKTKSLLP 753
                  K+++P
Sbjct: 609 LFKEMHQKNMVP 620



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 211/402 (52%), Gaps = 10/402 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
           Q+ F F + A   KR   +  ++  ++ L+K  G  L  Q        D+L +    +  
Sbjct: 357 QITFGFSVLAKILKR--GYPPSTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQ 412

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K+GD   A++   K+     +P+V +Y+ +++   + QL   A  ++ E
Sbjct: 413 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       ++VT+S LI G    GK + AI +L+EM  + I P+  TYTI++  L +  +
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGK 532

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +   M  +   PD   YN L+NG+  +  V +A  +  +    G  P + +Y+ 
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 592

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  ++K  DEA   +++M ++ + PD V Y  ++ GL ++G++     L+ +MR+RG
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              D   YN+LI G C  G LD+A +L  ++  +   PNT TFTIL+ G+C+ G + DAQ
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           ++F  +   G    V ++N +I G CK G LE+A  +  KME
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K       +    E+    +S     +  LI G+  VG  ++A+    +M  
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL 510

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  Y  +++   ++     A +V   M+K    P++ T++ L+NG     + + 
Sbjct: 511 KTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKK 570

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + + M+  G+ P+  TYTI+I+G C+    DEA  LF +M      PD V Y++L++
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD 630

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R+     L+      G    + +Y+ LIDGL +    D+A A + KM ++ I P
Sbjct: 631 GLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRP 690

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   + +++ GL + G++KDA ++  D+  +G   D Y YN +I G C  GLL++A ++ 
Sbjct: 691 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTML 750

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            ++ +   +PN  TF I+I  + +    D A+KL  +M   G
Sbjct: 751 SKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 2/247 (0%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V  DVF    L++GY  V + +KA   F  M      PDV+ Y  ++N   + ++   AL
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            ++ EM + N +P+ VT+S L++GL KSG+      ++DEM  RG   +  TY  +I GL
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+    D+A  LF KMKD G  P+   +  LL+G CK  R+ +A  + +     G+   +
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDV 727

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             Y+ +I G  +    +EA     KM E    P+ V + ++I  L +  +   A KLL  
Sbjct: 728 YIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQ 787

Query: 334 MRERGIV 340
           M  RG++
Sbjct: 788 MIARGLL 794



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 35/196 (17%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+K        F    ++  +    + S+++  L K       W  +DE+R         
Sbjct: 599 KSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVI 658

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQP---------------------------- 131
            +  LI G  K G  +KA+  F KMK+   +P                            
Sbjct: 659 TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 718

Query: 132 -------DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                  DVYIYN ++    ++ L   AL +  +M +  C+PN VTF ++IN L K  + 
Sbjct: 719 LTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEN 778

Query: 185 EVAIKMLDEMTQRGIL 200
           + A K+L +M  RG+L
Sbjct: 779 DKAEKLLRQMIARGLL 794


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 163/618 (26%), Positives = 285/618 (46%), Gaps = 77/618 (12%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
            +  +  + + KR RL   ++ S V S     +G +   Q  + L SG  +   +     
Sbjct: 39  SISSKIPLGSRKRNRLVLVSAASKVES-----SGLNGRAQKFETLSSGYSNSNGN----- 88

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
             G+Y   +   ALE        D + + ++   V      +    L   VY+  V    
Sbjct: 89  --GHYSSVNSSFALE--------DVESNNHLRQMVRTGELEEGFKFLENMVYHGNV---- 134

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P+I+  + LI G  + GKT  A K+L+ +   G +P+  TY ++ISG C+    + A  
Sbjct: 135 -PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGL 283
           +  +M     SPD V YN +L   C   ++ +A+ +L R  ++D + P + +Y+ LI+  
Sbjct: 194 VLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEAT 249

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R      A     +M +    PDVV Y V++ G+ + G++ +A+K L+DM   G  P+ 
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             +N +++  C  G    A  L  ++ ++   P+  TF ILI  +CR G++  A  +  K
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M + GC P+   +N L+ G CK  ++++A     +M           +S+G     D  +
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM-----------VSRGC--YPDIVT 416

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             TM+   C  G +  A +IL QL+  G  P +ITYN++I+G  K G    A+KL  E++
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            K L+PD++TY +L+ GL R  + ++A + F +  + G  P+   + S+M   C+ R+  
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A   +L ++ +   + +E+                                  YTI + 
Sbjct: 537 RAID-FLVFMINRGCKPNET---------------------------------SYTILIE 562

Query: 644 GLCQDGQVKEALNIFSVL 661
           GL  +G  KEAL + + L
Sbjct: 563 GLAYEGMAKEALELLNEL 580



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 17/401 (4%)

Query: 94  VSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           +SV  DV  +  ++      G  ++A+E   +M + DC PDV  Y  ++    R      
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ +  EM    C P++VT+++L+NG+ K G+ + AIK L++M   G  PN  T+ I++ 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            +C   R  +A +L   M   G SP  V +N L+N  C+   +  A+ +L    + G  P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY+ L+ G  + K+ D A  +  +M      PD+V Y  M+  L + GKV+DA+++L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + +  +G  P    YN +I G    G   +A  L  E+  +D  P+T T++ L+ G+ R 
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
           G VD+A K F++ E+ G  P+   FN+++ GLCK+ + ++A + L + +  G  P     
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP----- 552

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
                    ++ S   ++E     G+  +A ++L +L   G
Sbjct: 553 ---------NETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 252/572 (44%), Gaps = 67/572 (11%)

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           R +L L++ A   E   LN       F  L +G S S        +        +  N  
Sbjct: 51  RNRLVLVSAASKVESSGLNGRAQ--KFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNH 108

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
              +V +G       +E ++    M   G  PD +    L+ GFC+L +  +A  +L   
Sbjct: 109 LRQMVRTG-----ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           E  G VP + +Y+ +I G  +A   + A +   +M    + PDVV Y  ++R L ++GK+
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKL 220

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           K AM++L  M +R   PD   Y  LI+  C    +  A  L  E+  R   P+  T+ +L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEIGK 443
           + G+C+ G +D+A K  N M  +GC P+V   N ++  +C  G  ++   LL   +  G 
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           +P++               +   ++   C  GL+ +A  IL ++ + G  P+ ++YN L+
Sbjct: 341 SPSV--------------VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +GFCK   ++ A++  + +  +G  PD VTY T++  L +  + EDA  I  Q+   GC+
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P    Y ++                                  I+   + G+   AI+ L
Sbjct: 447 PVLITYNTV----------------------------------IDGLAKAGKTGKAIKLL 472

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGL 680
            EM  K        Y+  + GL ++G+V EA+  F    E + +   P+ V    ++ GL
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH---EFERMGIRPNAVTFNSIMLGL 529

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           CK    D A+D  ++ +  G   +P   +Y +
Sbjct: 530 CKSRQTDRAIDFLVFMINRG--CKPNETSYTI 559



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 174/340 (51%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I    + +G     + LDE+R    +     + VL++G  K G  ++A++    M    
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQP+V  +N +L        ++ A  +  +M++    P++VTF++LIN L + G    AI
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L++M Q G  PN  +Y  ++ G C+  + D A     +M   GC PD V YN +L   
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  +V++A+ +L      G  P L +Y+ +IDGL +A +  +A     +M  + ++PD 
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  ++ GLS  GKV +A+K   +    GI P+   +N+++ G C     D+A    V 
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +  R   PN  ++TILI G+   GM  +A +L N++   G
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 142/255 (55%), Gaps = 3/255 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   + G   +A++   KM +  CQP+   YN +L+   +
Sbjct: 334 DMLRKGFSPSVVT--FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ ++  L K GK E A+++L++++ +G  P   T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL +  +  +A +L  +M+     PD + Y++L+ G  +  +VDEA+     FE
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +++ ++ GL ++++ D A  +   M     +P+   Y ++I GL+  G  K
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571

Query: 326 DAMKLLSDMRERGIV 340
           +A++LL+++  +G++
Sbjct: 572 EALELLNELCNKGLM 586



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 82/173 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +++   K G  E A+E   ++    C P +  YN V++   +      A+ +  EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              +  P+ +T+S L+ GLS+ GK + AIK   E  + GI PN  T+  ++ GLC+  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           D A    + M + GC P+  +Y  L+ G        EAL LL      G + +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +++ L K    +   + L++L S   S V   +  +I G  K G   KA++   +M+ 
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +PD   Y++++    R+     A+  ++E  ++   PN VTF+ ++ GL KS +T+ 
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           AI  L  M  RG  PN+ +YTI+I GL     A EA  L  ++ + G
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 40/238 (16%)

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +  N+ +    + G +    K  + +   G  PD +   TLI G  R+ +   A +I   
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL------------WLQYLRDI--SGRDDE 602
           +  +G  P    Y  +++  C+  + + A S+            +   LR +  SG+  +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           +M+ ++  LQ+    + I                 YTI +   C+D  V  A+ +   L 
Sbjct: 223 AMEVLDRMLQRDCYPDVIT----------------YTILIEATCRDSGVGHAMKL---LD 263

Query: 663 ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLRSL 715
           E +     P  V    L++G+CK G LD A+        +G   +P V   N +LRS+
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG--CQPNVITHNIILRSM 319



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           D ES   + + ++ GE+E   + L  M +  N   + P T  + G C+ G+ ++A  I  
Sbjct: 102 DVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE 161

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLF 717
           +L    A+    +   +I G CK G ++ A+ V      +   + P V  Y  +LRSL  
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVL-----DRMSVSPDVVTYNTILRSLCD 216

Query: 718 SKDNKKVHAYHLLCRM 733
           S   K   A  +L RM
Sbjct: 217 S--GKLKQAMEVLDRM 230


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 284/627 (45%), Gaps = 41/627 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDEL--RSGN--VSVVSDVF--FVLISGYYKVGDCEKA 117
            +N+++++ L+K    D+  +  D++  R G+  + +V D +   +++ G   VG  E+ 
Sbjct: 165 VANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEG 224

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            +         C P+V  YN +++   +K     A  V+ E+     LP + T+  LI+G
Sbjct: 225 RKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDG 284

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             K+GK +V  ++L+EM   G+  N   +  +I    +    D+A  +   M + GC PD
Sbjct: 285 FCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPD 344

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              YN L+N  C   R+ EA   L   ++   +P   SY+ L+    +   Y  A     
Sbjct: 345 ITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLF 404

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           K+ E   +PD+V YG  I G    G++  A+ +   M E+G+ PD   YN L+ G C  G
Sbjct: 405 KIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKG 464

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
               A+ L  E+   +  P+ + +  L+ G  RN  +D A +LF  +   G  P V  +N
Sbjct: 465 RFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYN 524

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            +I GLCK G++  A     KM+I              N   D+ +  T+++ Y     +
Sbjct: 525 VMIKGLCKCGKMTDAVSYVNKMKI-------------ANHAPDEYTHSTVIDGYVKQHDL 571

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A K+  Q+ +    P+++ Y SLINGFCK+ +++ A K+F+ +Q   L P+ VTY  L
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I G  +  + E A   F  M  N C P+   +  L+         +L        L + +
Sbjct: 632 IGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTL--------LIEKN 683

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
             +D S+  I +F      E   Q             +A Y   ++ LC+ G V  A  +
Sbjct: 684 EENDRSL--ILDFFATMISEGWSQ------------VIATYNSIIVCLCKHGMVDTAQLL 729

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRG 684
            + ++    ++       L+HGLC+ G
Sbjct: 730 QTKMLRKGFLMDSVCFSALLHGLCQTG 756



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 222/493 (45%), Gaps = 7/493 (1%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L +  +  A+I    K   F +  Q L+E+    ++V   VF  +I   YK G  +KA E
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M E  C+PD+  YN ++N +        A        +   LPN  +++ L++   
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G   +A  ML ++ + G  P+  +Y   I G       D A  +  KM + G  PD  
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQ 451

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G CK  R   A  LL         P    Y+ L+DG  R    D+A   +  +
Sbjct: 452 IYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVV 511

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + I+P VV Y VMI+GL + GK+ DA+  ++ M+     PD Y ++ +I G+     L
Sbjct: 512 MSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDL 571

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D A  +  ++ K+   PN   +T LI G C+   +  A+K+F  M+     P+V  +  L
Sbjct: 572 DSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTIL 631

Query: 420 IDGLCKAGELEKANLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I G  K G+ EKA   F  M +     N T F  L  G   + +   L    E+   + +
Sbjct: 632 IGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLI 691

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +         +   G    I TYNS+I   CK G ++ A  L  ++  KG   DSV +  
Sbjct: 692 L----DFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSA 747

Query: 537 LINGLQRVDREED 549
           L++GL +  + ++
Sbjct: 748 LLHGLCQTGKSKE 760



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 238/549 (43%), Gaps = 28/549 (5%)

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYN 242
           +E+ I +L++M  R   P       VI    +    D+A ++F  + +   C P  VA N
Sbjct: 110 SEIEI-VLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANN 168

Query: 243 ALLNGFCKLRRVDEALAL----LRSFEKDGFVPRLGSYSCLI--DGLFRAKRYDEAYAWY 296
           +LLN   K  +VD A  L    L      G    + +YS +I   GL    + +E     
Sbjct: 169 SLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLI 228

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
              +     P+VV Y V+I G  + G +K A ++  +++ +G +P    Y ALI GFC  
Sbjct: 229 DDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKA 288

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G       L  E+       N   F  +I    + G+VD A ++   M + GC P +  +
Sbjct: 289 GKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTY 348

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N LI+  C  G +++A      +E  K  TL          + +K S   ++  YC  G 
Sbjct: 349 NILINFSCSGGRIKEAEEF---LERAKERTL----------LPNKFSYTPLMHAYCKQGD 395

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
              A  +L ++AE+G+ PD+++Y + I+G    G I+ AL + +++  KG+ PD+  Y  
Sbjct: 396 YVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNV 455

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L++GL +  R   A  +  +M      P   +Y +L+    R  +   A  L+   +   
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMS-- 513

Query: 597 SGRDDESMK---SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
            G D   +     I+   + G++ +A+  + +M    +      ++  + G  +   +  
Sbjct: 514 KGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDS 573

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           AL +F  +++ K      +   LI+G CK   +  A  VF       F L P V  Y + 
Sbjct: 574 ALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVF--RAMQSFNLEPNVVTYTIL 631

Query: 714 SLLFSKDNK 722
              FSK  K
Sbjct: 632 IGGFSKTGK 640



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 138/315 (43%), Gaps = 47/315 (14%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           + ++ VL+SG  K G    A     +M + + QPD Y+Y  +++   R      A  ++ 
Sbjct: 450 AQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            ++     P +V ++++I GL K GK   A+  +++M      P+++T++ VI G  + +
Sbjct: 510 VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQH 569

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             D A ++F +M      P+ VAY +L+NGFCK+  +  A  + R+ +     P + +Y+
Sbjct: 570 DLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYT 629

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS------------------ 319
            LI G  +  + ++A +++  M      P+   +  +I GL+                  
Sbjct: 630 ILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRS 689

Query: 320 -----------------------------EAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
                                        + G V  A  L + M  +G + D+ C++AL+
Sbjct: 690 LILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALL 749

Query: 351 KGFCDLGLLDQARSL 365
            G C  G   + R++
Sbjct: 750 HGLCQTGKSKEWRNI 764



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 177/446 (39%), Gaps = 68/446 (15%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM- 404
           Y++L+K      L  +   +  ++  R+  P       +IC     G VD A K+F  + 
Sbjct: 96  YSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVC 155

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL-------------- 449
           E   CFP V   N+L++ L K G+++ A  L+ KM E G +  L L              
Sbjct: 156 ELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGL 215

Query: 450 ----RLSQGGNRVHDK---------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
               ++ +G   + D+              +++ YC  G + +A ++  +L   G LP +
Sbjct: 216 CDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTL 275

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            TY +LI+GFCK G      +L  E+ + GL  +   + ++I+   +    + A  +   
Sbjct: 276 ETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRM 335

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M + GC P    Y  L+ +SC                    GR    +K  EEFL++ + 
Sbjct: 336 MTEMGCEPDITTYNILINFSCS------------------GGR----IKEAEEFLERAK- 372

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
                   E     N F    YT  +   C+ G    A ++   + E        S    
Sbjct: 373 --------ERTLLPNKFS---YTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAF 421

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           IHG    G +D+A+ V    ++ G     ++ N L+  L   K  +   A  LL  M  +
Sbjct: 422 IHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGL--CKKGRFPAAKLLLSEMLDL 479

Query: 737 GYDLDACLYPKTKSLLPGPWNTREME 762
               DA +Y    +L+ G     E++
Sbjct: 480 NLQPDAYMYA---TLVDGFIRNNELD 502


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 260/544 (47%), Gaps = 53/544 (9%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L +F +M      PDV   N VL +      +    AV+ EM++L   P+IVT++ L++ 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 178 LSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
             K G+ +    +L EM  R  G LPN  T+ +VI+GL +    +EA  +   M+ S  +
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
             F  YN L+ G      V +A  L    E +G +P + +Y+ +I GL ++ + + A   
Sbjct: 307 SSFT-YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M    ++PDV+ Y  ++ G  +AG +K+A+ L  D+R  G+ P    YN LI G+C 
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG----CFP 411
           LG L++AR L+ E+ ++  LP+  T+TIL+ G      +  A++ F++M   G    CF 
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485

Query: 412 ---------SVG----------------------MFNALIDGLCKAGELEKANLLFYKM- 439
                    ++G                       +N LIDGLCK G L  A  L  KM 
Sbjct: 486 YNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMV 545

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             G  P              D  +   ++  +C  GL+ +A K    +   G  P  +TY
Sbjct: 546 HNGLQP--------------DCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTY 591

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
              I+ +C+ GN+  A   F+++  +G+ P+ +TY  LI+ L R  R + A+R F +M +
Sbjct: 592 TVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G  P+   Y  L+  +C+   +  A   + +  ++    D  + K++ +   +G + +A
Sbjct: 652 RGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHA 711

Query: 620 IQGL 623
           I+ L
Sbjct: 712 IEYL 715



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 227/483 (46%), Gaps = 18/483 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRS-GNVSVVSDVFF-VLISGYYKVGDCEKALE 119
           S  + + ++   LK    D     L E+ + G+  + +DV   V+I+G  + GD E+A E
Sbjct: 236 SIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAE 295

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M+    +   + YN ++     K     A  +  EM     +P +VT++ +I+GL 
Sbjct: 296 MVEGMR-LSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLL 354

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           +SG+ E A     EM   G+ P+  TY  +++G C+     EA  LF  ++ +G +P  +
Sbjct: 355 QSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVL 414

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+C+L  ++EA  L     + G +P + +Y+ L+ G   A     A  ++ +M
Sbjct: 415 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEM 474

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + ++PD   Y   IR     G +  A +L   M   GI  DT  YN LI G C  G L
Sbjct: 475 LSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNL 534

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           + A+ LQ+++      P+  T+T LI   C  G++ +A+K F  M   G  PS   +   
Sbjct: 535 NDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVF 594

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I   C+ G L  A   F KM E G  P              ++ +   ++   C  G   
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEP--------------NEITYNVLIHALCRTGRTQ 640

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            AY+   ++ E G +P+  TY  LI+G CK GN   A++ + E+   G+ PD +T+  L 
Sbjct: 641 LAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700

Query: 539 NGL 541
            G 
Sbjct: 701 KGF 703



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 248/570 (43%), Gaps = 57/570 (10%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L L+ ++EM      P++   + ++  LS + + +    +  EM Q GI P+  TY  ++
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 211 SGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
               +  R D+   L  +M  + SGC P+ V +N ++ G  +   ++EA  ++       
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK 304

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                 +Y+ LI GL       +A     +M  E I P VV Y  MI GL ++G+V+ A 
Sbjct: 305 KASSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
               +MR  G+ PD   YN+L+ G+C  G L +A  L  ++      P   T+ ILI G 
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGY 423

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           CR G +++A++L  +M + GC P V  +  L+ G   A  L  A   F +M   G  P  
Sbjct: 424 CRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDC 483

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F              +  T +    T G I KA+++   +   G   D +TYN LI+G C
Sbjct: 484 F--------------AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLC 529

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN+N A  L  ++   GL+PD +TY  LI+         +A + F  M  +G  PS  
Sbjct: 530 KTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAV 589

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y   +   CRR     A+  W +             K +EE ++  E+           
Sbjct: 590 TYTVFIHAYCRRGNLYSAYG-WFR-------------KMLEEGVEPNEIT---------- 625

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                     Y + +  LC+ G+ + A   F  ++E   +    +   LI G CK G  +
Sbjct: 626 ----------YNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
            AM  +    +NG  + P   +YL    LF
Sbjct: 676 DAMRFYFEMHQNG--IHP---DYLTHKALF 700



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 204/460 (44%), Gaps = 33/460 (7%)

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M    + PDV     ++R LS+A +  D   + ++M + GI P    YN L+  F  
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 356 LGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKLFNKM---EKAGCF 410
            G  D+   L  E+  R S  LPN  T  ++I G+ R G +++A ++   M   +KA  F
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF 309

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
                +N LI GL   G ++KA+ L  +ME  G  PT+               +   M+ 
Sbjct: 310 ----TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTV--------------VTYNAMIH 351

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
               +G +  A    +++   G  PD+ITYNSL+NG+CK G++  AL LF +L+  GL P
Sbjct: 352 GLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAP 411

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             +TY  LI+G  R+   E+A R+  +M + GC P    Y  LM  S      ++A   +
Sbjct: 412 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFF 471

Query: 590 LQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            + L      D  +  + I   L  G +  A +    M  +        Y I + GLC+ 
Sbjct: 472 DEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKT 531

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
           G + +A ++   +V        P C+    LIH  C+RG L  A   F   + +G  L P
Sbjct: 532 GNLNDAKDLQMKMVHNG---LQPDCITYTCLIHAHCERGLLREARKFFKDMISDG--LAP 586

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               Y +    + +      AY    +M   G + +   Y
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 626



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 36/310 (11%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL------- 140
           +LR   ++     + +LI GY ++GD E+A     +M E  C PDV  Y  ++       
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNAC 462

Query: 141 ------------------------NIAFRKQLFLLALAVYYEMVKLNCLPNI----VTFS 172
                                   N   R +L L A+A  + + ++  L  I    VT++
Sbjct: 463 SLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYN 522

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI+GL K+G    A  +  +M   G+ P+  TYT +I   C+     EA + F  M   
Sbjct: 523 ILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISD 582

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +P  V Y   ++ +C+   +  A    R   ++G  P   +Y+ LI  L R  R   A
Sbjct: 583 GLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           Y  + +M E  + P+   Y ++I G  + G  +DAM+   +M + GI PD   + AL KG
Sbjct: 643 YRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702

Query: 353 FCDLGLLDQA 362
           F D G ++ A
Sbjct: 703 F-DEGHMNHA 711


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 234/492 (47%), Gaps = 54/492 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G++   + +KA    G +++   +PDV+ YNAV++   +      A  V   M +  
Sbjct: 16  LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEA 222
             P++VT +++I      GK ++A+K+ +E+ +     P   TYTI+I         DEA
Sbjct: 75  FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +L  +M   G  PD   YN +  G CK  +VD A   +R+    G  P + +Y+ L+  
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRA 194

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L    ++DE   W  ++F    EP+VV Y ++I  L   GK+++++ L+  M+E+G+ PD
Sbjct: 195 LLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPD 254

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            YCY+ LI  FC  G LD A      +     LP+   +  ++  +C+NG  D A ++F 
Sbjct: 255 AYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFG 314

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           K+++ GC P+V  +N ++  L  +G+                                  
Sbjct: 315 KLDEVGCPPNVSSYNTMLSALWSSGDR--------------------------------- 341

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                          ++A  ++ Q+   G  PD+ITYNSLI+  C+ G ++ A+ L  ++
Sbjct: 342 ---------------YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW----SCR 578
                +P+ V+Y T++ GL +  R +DA  +   M +NGC P+   Y  L+        R
Sbjct: 387 LSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSR 446

Query: 579 RRKFSLAFSLWL 590
            +   LA SL++
Sbjct: 447 TQAMELANSLYI 458



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 196/404 (48%), Gaps = 8/404 (1%)

Query: 56  KRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGD 113
           KRK       +++ +I         DL  +  +EL +  N       + +LI  Y   G 
Sbjct: 71  KRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGG 130

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            ++AL+   +M     +PD + YN +     ++     A      +    C P+++T+++
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+  L   GK +   K + E+  RG  PN  TY+I+IS LC+  + +E+  L   MK+ G
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            +PD   Y+ L+  FC+  ++D A+  L     DGF+P + +Y+ ++  L +    D A 
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + K+ E    P+V  Y  M+  L  +G    A+ ++S M  +GI PD   YN+LI   
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G++D+A  L  ++      PN  ++  ++ G+C+   +DDA ++   M + GC P+ 
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNE 430

Query: 414 GMFNALIDGLCKAGE----LEKANLLFYKMEIGKNPTLFLRLSQ 453
             +  LI+G+  +G     +E AN L+    I ++   F RL++
Sbjct: 431 TTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDS--FKRLNK 472



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 210/479 (43%), Gaps = 53/479 (11%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD +    L+ GF   R +D+A  ++   EK G  P + +Y+ +I G  +A R + A   
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFC 354
             +M  +   PDVV + +MI      GK+  A+K+  ++ ++    P    Y  LI+ + 
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +D+A  L  E+  R   P+T T+ ++  G+C+ G VD A +    +   GC P V 
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N L+  L   G+ ++      ++   G  P +               +   ++   C 
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV--------------VTYSILISSLCR 232

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G I ++  ++  + E G  PD   Y+ LI  FC+ G ++ A++    +   G  PD V 
Sbjct: 233 DGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN 292

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T++  L +    + A  IFG++ + GC P+ + Y ++++            +LW    
Sbjct: 293 YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS------------ALW---- 336

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
              SG    ++  I + L KG                 D  +  Y   +  LC+DG V E
Sbjct: 337 --SSGDRYRALGMISQMLSKGI----------------DPDVITYNSLISCLCRDGMVDE 378

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           A+ + + ++  +      S   ++ GLCK   +D A++V    ++NG   +P    Y L
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG--CQPNETTYTL 435



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 133/338 (39%), Gaps = 80/338 (23%)

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD+I    LI GF    NI+ A ++   L+  G +PD   Y  +I+G  + +R E A  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD------------------ 595
             +M + G +P    +  ++   C + K  LA  ++ + L+D                  
Sbjct: 67  LDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYI 126

Query: 596 ISGRDDESMKSIEEFLQK-------------------GEVENAIQGLLEMDFKLNDFQLA 636
           + G  DE++K ++E L +                   G+V+ A + +  ++ +     + 
Sbjct: 127 LEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVI 186

Query: 637 PYTIWLIGL-----------------------------------CQDGQVKEALNIFSVL 661
            Y I L  L                                   C+DG+++E++N+  V+
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 662 VECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
            E K +     C   LI   C+ G LD+A++     + +GF+  P + NY        K+
Sbjct: 247 KE-KGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFL--PDIVNYNTIMAALCKN 303

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
               HA  +  ++  VG   +   Y    ++L   W++
Sbjct: 304 GNGDHAVEIFGKLDEVGCPPNVSSY---NTMLSALWSS 338


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 251/532 (47%), Gaps = 22/532 (4%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+ SF +M      P    +N +L    + +     L++ ++M      PNI T  +L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+T +I G+    +  EA  LF KM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V Y  L+NG CK+     A+ LL S  +    P + +Y+ +ID L + ++  EA+ 
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + I PD+  Y  +I  L    + K    LL++M +  I+PD   +N ++   C
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +  ++ +R   PN  T+T L+ G C    +D+A K+F+ M   GC P+V 
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342

Query: 415 MFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG---GNRVHDKASL---- 464
            +N LI+G CK   ++KA  LF +M   E+  +   +  L  G     R+ D  +L    
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 465 ------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                       + +++  C    + +A  +L  +  S   PDI   N  I+G C+ G +
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  LF  L  KGL+PD  TY  +INGL R    ++A ++F +M +NGCT +  +Y ++
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
                R  + S A  L  + +      D  +M    + L    ++ +++ +L
Sbjct: 523 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 264/557 (47%), Gaps = 51/557 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI   + M +    P+   +  +++ + ++        L  +M   G  P+    + L+N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC L RV  A ++L    K G  P   +++ LI G++   +  EA   + KM  E   P
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV YG +I GL + G    A++LL  M ++   P+ + YN +I   C    + +A +L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +   P+  T+  LI  +C          L N+M  +   P V  FN ++D LCK 
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++ +A+ +  KM + G  P +               +   +++ +C    + +A K+  
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNV--------------VTYTALMDGHCLLSEMDEAVKVFD 330

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G +P++I+YN+LING+CK+  I+ A+ LF E+  + L PD+VTY TLI+GL  V+
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 390

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R +DA  +F +M      P+   Y+ L+ + C+ R  + A +L    L+ I G +     
Sbjct: 391 RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL----LKAIEGSN----- 441

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                             L+ D ++N+       I + G+C+ G+++ A ++FS L    
Sbjct: 442 ------------------LDPDIQVNN-------IAIDGMCRAGELEAARDLFSNLSSKG 476

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
                 +   +I+GLC+RG LD A  +F    +NG  L   + N + R  L  ++N+   
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL--RNNETSR 534

Query: 726 AYHLLCRMKSVGYDLDA 742
           A  LL  M + G+  DA
Sbjct: 535 AIQLLQEMVARGFSADA 551



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
              +LI+ +  +     A     K+ +   QPD   +  ++   + +     AL ++ +M
Sbjct: 98  TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKM 157

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P++VT+  LINGL K G T  AI++L  M Q+   PN F Y  +I  LC+  + 
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA+ LF +M   G SPD   YN+L++  C L        LL        +P + S++ +
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +D L +  +  EA+    KM +  +EP+VV Y  ++ G     ++ +A+K+   M  +G 
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P+   YN LI G+C +  +D+A  L  E+ +++ +P+T T++ LI G+C    + DA  
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF++M      P++  +  L+D LCK   L +A  L   +E             G N   
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE-------------GSNLDP 444

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D       ++  C AG +  A  +   L+  G  PD+ TY+ +ING C+ G ++ A KLF
Sbjct: 445 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 504

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +E+   G   +   Y T+  G  R +    A ++  +M   G
Sbjct: 505 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 209/435 (48%), Gaps = 15/435 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI G Y  G   +AL  F KM     +PDV  Y  ++N   +      A+ +   M
Sbjct: 133 TFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+ NC PN+  ++ +I+ L K  +   A  +  EM  +GI P+ FTY  +I  LC +   
Sbjct: 193 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 252

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                L  +M DS   PD V++N +++  CK  +V EA  ++    + G  P + +Y+ L
Sbjct: 253 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG       DEA   +  M  +   P+V+ Y  +I G  +  ++  AM L  +M  + +
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PDT  Y+ LI G C +  L  A +L  E+     +PN  T+ IL+  +C+N  + +A  
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 432

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           L   +E +   P + + N  IDG+C+AGELE A  LF  +   G  P             
Sbjct: 433 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP------------- 479

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   M+   C  GL+ +A K+  ++ E+G   +   YN++  GF +    + A++L
Sbjct: 480 -DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 519 FKELQLKGLRPDSVT 533
            +E+  +G   D+ T
Sbjct: 539 LQEMVARGFSADAST 553



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 146/293 (49%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  ++    K G   +A +   KM +   +P+V  Y A+++          A+ V+  MV
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C+PN+++++ LING  K  + + A+ +  EM ++ ++P+  TY+ +I GLC + R  
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  LF +M      P+ V Y  LL+  CK R + EA+ALL++ E     P +   +  I
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 453

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG+ RA   + A   +  +  + ++PDV  Y +MI GL   G + +A KL  +M E G  
Sbjct: 454 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 513

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            +   YN + +GF       +A  L  E+  R    +  T T+ +  +  +G+
Sbjct: 514 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 139/305 (45%), Gaps = 1/305 (0%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K +    S + V+  L K          +D++    V      +  L+ G+  + + ++A
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEA 325

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           ++ F  M    C P+V  YN ++N   + Q    A+ ++ EM +   +P+ VT+S LI+G
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L    + + AI +  EM     +PN  TY I++  LC+     EA  L   ++ S   PD
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPD 445

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
               N  ++G C+   ++ A  L  +    G  P + +YS +I+GL R    DEA   +R
Sbjct: 446 IQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFR 505

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M E     +  +Y  + RG     +   A++LL +M  RG   D       +K   D G
Sbjct: 506 EMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 565

Query: 358 LLDQA 362
            LDQ+
Sbjct: 566 -LDQS 569


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 284/602 (47%), Gaps = 63/602 (10%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF-- 102
           +  F  F+  +KR       + + ++S L+K N     ++  D    G   V  DVF   
Sbjct: 203 RCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQG---VAPDVFTFT 259

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
             I+ + K G    A++ F KM+     P+V  YN V++  F+   F  AL     MV+ 
Sbjct: 260 TAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRS 319

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT+ +LI+GL K    E A ++L EM   G  PN+  +  +I G C+     EA
Sbjct: 320 KVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEA 379

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL--------------------R 262
            R+  +M   G  P+FV +N LL GFC+  ++++A  +L                    R
Sbjct: 380 LRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHR 439

Query: 263 SFEKDGFVPRLGSYSCLID---------------GLFRAKRYDEAYA-WYRKMFEEKIEP 306
             E+ GFV  L   + L+                GL + + + EA   W++    + +  
Sbjct: 440 LMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAA 499

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V    ++ GL E G +++  ++L  M E+G++ D   YN LI G C  G +++A  L+
Sbjct: 500 NTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLK 559

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +++  P+T+T+  L+ G+   G +DD  +L ++ ++ G  P+V  +  L++G CKA
Sbjct: 560 EEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKA 619

Query: 427 GELEKA-----NLLFYKMEIGK--NPTLFLRLSQGGN-----RVHDK----------ASL 464
             +E A     NL + K+E+       L     + GN     ++ D           A+ 
Sbjct: 620 DRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATY 679

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            +++   C  G + +A +I  ++   G LP++  Y +LI G CK+G ++    +  E+  
Sbjct: 680 SSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSS 739

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+RP+ +TY  +I+G  ++   ++A  +  +M +NG  P    Y +L    C+ R+ ++
Sbjct: 740 NGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTV 799

Query: 585 AF 586
             
Sbjct: 800 TL 801



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 270/615 (43%), Gaps = 78/615 (12%)

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           ++RG+ P   T  +++S L + N   ++Y +F  +   G +PD   +   +N FCK  RV
Sbjct: 213 SKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAFCKGGRV 271

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            +A+ L    E  G  P + +Y+ +IDGLF++ R++EA  +  +M   K+ P VV YGV+
Sbjct: 272 GDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVL 331

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL +    ++A ++L +M   G  P+   +NALI G+C  G + +A  ++ E+  +  
Sbjct: 332 ISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGM 391

Query: 375 LPNTHTFTILICGMCRNGMVDDAQK--------------------LFNKMEKAGCFPSV- 413
            PN  TF  L+ G CR+  ++ A++                    +   ME++G   ++ 
Sbjct: 392 KPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALK 451

Query: 414 --------------GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
                          +   L+ GLCK     +A  L++K+   K            N V 
Sbjct: 452 IVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVK--------GLAANTVT 503

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
             A L  +    C  G + + +++L Q+ E G L D I+YN+LI G CK G I  A KL 
Sbjct: 504 SNALLHGL----CERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLK 559

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +E+  +  +PD+ TY  L+ GL  + + +D  R+  +  + G  P+   Y  L+   C+ 
Sbjct: 560 EEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKA 619

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS-----IEEFLQKGEVENAIQGLLEMDFKLNDF- 633
            +   A    +++ +++     E         I  + + G V  A        FKL D  
Sbjct: 620 DRIEDA----VKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEA--------FKLRDAM 667

Query: 634 -------QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
                    A Y+  + G+C  G+V EA  IF  +     +        LI G CK G +
Sbjct: 668 KSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQM 727

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYP 746
           D+   + L    NG  +RP    Y +    + K      A  LL  M   G   D   Y 
Sbjct: 728 DIVGSILLEMSSNG--IRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTY- 784

Query: 747 KTKSLLPGPWNTREM 761
              +L  G    RE+
Sbjct: 785 --NALQKGYCKEREL 797



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 253/528 (47%), Gaps = 27/528 (5%)

Query: 22  LEPLLPFLSKTTVTSVI---MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           +E L  F +  T  +VI    K+   +   RF     + K   S  +   +IS L+K   
Sbjct: 281 MEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEM 340

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           F+   + L E+ S   +    VF  LI GY + GD  +AL    +M     +P+   +N 
Sbjct: 341 FEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNT 400

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +L    R      A  V   ++      N+   S +I+ L +      A+K++ ++    
Sbjct: 401 LLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGN 460

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEA 257
           I  +    T ++ GLC+     EA  L+ K+    G + + V  NALL+G C+   ++E 
Sbjct: 461 IRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEV 520

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +L+   + G +    SY+ LI G  +  + +EA+    +M +++ +PD   Y  +++G
Sbjct: 521 FEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKG 580

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRD 373
           L++ GK+ D  +LL + +E G VP+ Y Y  L++G+C    ++ A    ++L  E  +  
Sbjct: 581 LADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELS 640

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           S+     + ILI   CR G V +A KL + M+  G  P+   +++LI G+C  G +++A 
Sbjct: 641 SV----VYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAK 696

Query: 434 LLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F +M   G  P +F                  ++  +C  G +     IL++++ +G 
Sbjct: 697 EIFEEMRNEGLLPNVF--------------CYTALIGGHCKLGQMDIVGSILLEMSSNGI 742

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            P+ ITY  +I+G+CK+GN+  A +L  E+   G+ PD+VTY  L  G
Sbjct: 743 RPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 216/476 (45%), Gaps = 82/476 (17%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S VI  L++ +GF    + + +L SGN+ V   +   L+ G  K     +A+E + K+  
Sbjct: 434 SYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLA- 492

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                      AV  +A                       N VT + L++GL + G  E 
Sbjct: 493 -----------AVKGLA----------------------ANTVTSNALLHGLCERGNMEE 519

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             ++L +M ++G+L ++ +Y  +I G C+  + +EA++L  +M      PD   YN L+ 
Sbjct: 520 VFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMK 579

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G   + ++D+   LL   ++ GFVP + +Y+ L++G  +A R ++A  +++ +  EK+E 
Sbjct: 580 GLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVEL 639

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             V+Y ++I      G V +A KL   M+ RGI+P    Y++LI G C +G +D+A+ + 
Sbjct: 640 SSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIF 699

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+     LPN   +T LI G C+ G +D    +  +M   G  P+   +  +IDG CK 
Sbjct: 700 EEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKL 759

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G +++A                                                 ++L +
Sbjct: 760 GNMKEAR------------------------------------------------ELLNE 771

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  +G  PD +TYN+L  G+CK   +   L+   +  +     + +TY TLI+ L 
Sbjct: 772 MIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIHKLH 827


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 290/622 (46%), Gaps = 78/622 (12%)

Query: 42  KNPQVGFRFFIWAAKRKR---------LRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           KNP      F  A++ K          LR  A++S ++S + +          +D +++ 
Sbjct: 24  KNPLSALSLFESASRNKSHSAHVFHHILRRLAADSRLVSHVSR---------IVDIVKAQ 74

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLN---------- 141
                 DV   +I  Y K     KAL++F  M++ F C+P V  YN +LN          
Sbjct: 75  KCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDR 134

Query: 142 -------------------------IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
                                    I+ +KQ    A+++   M   N  P++ ++  LIN
Sbjct: 135 AESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLIN 194

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCS 235
           G+ K G    A+K+ DEM+ RG++ +   Y ++I G  +    D+   ++ ++ KD    
Sbjct: 195 GMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVY 254

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V YN ++NG CK  R DE+L +     K+     + +YS LI GL  A   D A   
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           Y+++ E  +  D V +  M+ G   AGK+K++ +L   M +         YN LIKG  +
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFE 373

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G +++A S+   + K+   P + T+ +LI G+C+NG ++ A K+F + E          
Sbjct: 374 NGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYA 433

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGK--------NPTL--FLRLSQGGNRVH------ 459
           +++++DGLCK G +++A  +  +M+           NP +  F+R S+  + ++      
Sbjct: 434 YSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREME 493

Query: 460 ------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    S  T+++  C A    +AY  + ++ E    PD+IT + L++G C+   I 
Sbjct: 494 CKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIE 553

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL L+++   KG +PD   Y  L++GL  V + EDA +++  M ++ C P+     +LM
Sbjct: 554 MALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613

Query: 574 TWSCRRRKFSLAFSLWLQYLRD 595
               + R +  A  +W   L+D
Sbjct: 614 EGLYKVRDYEKASEIWDCILKD 635



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 257/518 (49%), Gaps = 25/518 (4%)

Query: 86  LDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           LD + S N+    DVF    LI+G  KVGD   AL+ F +M       DV  YN +++  
Sbjct: 174 LDWMWSQNLK--PDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGF 231

Query: 144 FRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
           F+   +     ++  +VK  +  PN+VT++++INGL K G+ + ++++ + MT+     +
Sbjct: 232 FKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKD 291

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            FTY+ +I GLC+    D A R++ ++ +S    D V +NA+LNGFC+  ++ E+  L  
Sbjct: 292 MFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM 351

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              K+     + SY+ LI GLF   + +EA + +  + ++   P+   YGV+I GL + G
Sbjct: 352 VMGKEN-CQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNG 410

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++  A+K+  +  +     D Y Y++++ G C  G +D+A S+  ++ KR    + H   
Sbjct: 411 RLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCN 470

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EI 441
            LI G  R   ++DA   F +ME  GC P++  +N LI GLCKA    +A     +M E 
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
              P              D  +   +++  C    I  A  +  Q  + G  PDI  YN 
Sbjct: 531 EWKP--------------DMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNI 576

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L++G C V  +  AL+L+  ++     P+ VT  TL+ GL +V   E A  I+  + ++G
Sbjct: 577 LMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG 636

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
             P    Y   +   C   + S A    +++L D   R
Sbjct: 637 LHPDIISYNITIKGLCSCSRISDA----IEFLNDALNR 670



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 252/509 (49%), Gaps = 27/509 (5%)

Query: 209 VISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           VI    +   +++A   F  M+D  GC P   +YN LLN F +L   D A +  R FE  
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P L +Y+ LI    + ++ ++A +    M+ + ++PDV  YG +I G+ + G +  A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-----DSLPNTHTFT 382
           +K+  +M  RG+V D  CYN LI GF   G  D+ +    EIW+R        PN  T+ 
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGK----EIWERLVKDCSVYPNVVTYN 261

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
           I+I G+C+ G  D++ +++ +M K      +  +++LI GLC+AG ++ A +  YK EI 
Sbjct: 262 IMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGA-VRVYK-EIV 319

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
           ++             V D  +   M+  +C AG I +++++ M + +  N   +++YN L
Sbjct: 320 ESSL-----------VVDAVTHNAMLNGFCRAGKIKESFELWMVMGKE-NCQTVVSYNIL 367

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I G  + G +  A+ +++ L  KG RP+S TYG LI+GL +  R   A +IF +      
Sbjct: 368 IKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPG 427

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQ 621
                 Y S++   C+  +   A S+  Q  +     D       I  F++  ++E+AI 
Sbjct: 428 KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAIN 487

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
              EM+ K     +  Y   + GLC+  +  EA +    ++E +      +C  L+ GLC
Sbjct: 488 FFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLC 547

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +   +++A++++   L  GF  +P +  Y
Sbjct: 548 QEKKIEMALNLWQQALDKGF--KPDITMY 574



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 227/483 (46%), Gaps = 56/483 (11%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           VV+DV  + +LI G++K GD +K  E + ++ K+    P+V  YN ++N   +   F  +
Sbjct: 217 VVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDES 276

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L ++  M K     ++ T+S LI+GL ++G  + A+++  E+ +  ++ +  T+  +++G
Sbjct: 277 LEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNG 336

Query: 213 LCQINRADEAYRLFLKMKDS----------------------------------GCSPDF 238
            C+  +  E++ L++ M                                     GC P+ 
Sbjct: 337 FCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPES 396

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             Y  L++G CK  R+++AL + +  E         +YS ++DGL +  R DEA +   +
Sbjct: 397 TTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQ 456

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M +   + D  +   +I G   A K++DA+    +M  +G  P    YN LIKG C    
Sbjct: 457 MDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAER 516

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
             +A S   E+ +++  P+  T ++L+ G+C+   ++ A  L+ +    G  P + M+N 
Sbjct: 517 FSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNI 576

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKN-PTLFLR--LSQGGNRVHDKASLQTMVEQYCTAG 475
           L+ GLC   +LE A  L+  M+     P L  R  L +G  +V D               
Sbjct: 577 LMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRD--------------- 621

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
              KA +I   + + G  PDII+YN  I G C    I+ A++   +   +G+ P +VT+ 
Sbjct: 622 -YEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWN 680

Query: 536 TLI 538
            L+
Sbjct: 681 ILV 683



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 193/383 (50%), Gaps = 3/383 (0%)

Query: 52  IWA--AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           IW    K +R +   + S++I  L +    D   +   E+   ++ V +     +++G+ 
Sbjct: 279 IWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFC 338

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + G  +++ E +  M + +CQ  V  YN ++   F       A++++  + K  C P   
Sbjct: 339 RAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPEST 397

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T+ +LI+GL K+G+   A+K+  E        + + Y+ ++ GLC+  R DEA  +  +M
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G   D    N L+NGF +  ++++A+   R  E  G  P + SY+ LI GL +A+R+
Sbjct: 458 DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF 517

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EAY++ ++M E++ +PD++   +++ GL +  K++ A+ L     ++G  PD   YN L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNIL 577

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G C +  L+ A  L   + +   +PN  T   L+ G+ +    + A ++++ + K G 
Sbjct: 578 MHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGL 637

Query: 410 FPSVGMFNALIDGLCKAGELEKA 432
            P +  +N  I GLC    +  A
Sbjct: 638 HPDIISYNITIKGLCSCSRISDA 660



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 192/419 (45%), Gaps = 27/419 (6%)

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIKGFCDLGLLDQAR 363
           + DV L   +I+  ++      A+    +M++  G  P    YN L+  F +L   D+A 
Sbjct: 79  KEDVAL--TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAE 136

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           S        D  PN  T+ ILI   C+   ++ A  L + M      P V  +  LI+G+
Sbjct: 137 SFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGM 196

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            K G+L  A  +F +M +                V D      +++ +   G   K  +I
Sbjct: 197 VKVGDLLGALKVFDEMSVR-------------GVVADVTCYNMLIDGFFKHGDYDKGKEI 243

Query: 484 LMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
             +L +  ++ P+++TYN +ING CK G  + +L++++ +       D  TY +LI+GL 
Sbjct: 244 WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD- 601
                + A R++ ++ ++        + +++   CR  K   +F LW+     + G+++ 
Sbjct: 304 EAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM-----VMGKENC 358

Query: 602 ESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           +++ S    I+   + G+VE AI     +  K    +   Y + + GLC++G++ +AL I
Sbjct: 359 QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKI 418

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           F    +    +   +   ++ GLCK G +D A+ +     K G+ L P VCN L+   +
Sbjct: 419 FKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFV 477



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 135/249 (54%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G  K G  ++A+    +M +   + D ++ N ++N   R      A+  + EM    
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P IV+++ LI GL K+ +   A   + EM ++   P+  T ++++ GLCQ  + + A 
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L+ +  D G  PD   YN L++G C + ++++AL L    ++   VP L + + L++GL
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           ++ + Y++A   +  + ++ + PD++ Y + I+GL    ++ DA++ L+D   RGI+P  
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676

Query: 344 YCYNALIKG 352
             +N L++ 
Sbjct: 677 VTWNILVRA 685



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 71/150 (47%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +L+ G  +    E AL  + +  +   +PD+ +YN +++          AL +Y  M + 
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C+PN+VT + L+ GL K    E A ++ D + + G+ P+  +Y I I GLC  +R  +A
Sbjct: 601 TCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDA 660

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
                   + G  P  V +N L+      R
Sbjct: 661 IEFLNDALNRGILPTAVTWNILVRAAVNFR 690


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/533 (26%), Positives = 249/533 (46%), Gaps = 23/533 (4%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M      P    +N +L    + + +    ++  +M      P++ T ++L
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+T +I GLC   +  +A  LF KM   G 
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 170

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK+   + A+ LLRS E+    P +  Y+ +ID L + ++  EA+ 
Sbjct: 171 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM  + I PD+  Y  +I  L    + K    LL+ M    I+PD   ++ ++   C
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 290

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +   +  R   PN  T+  L+ G C    +D+A K+F+ M   G  P+V 
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-------------------EIGK---NPTLFLRLS 452
            +N LI+G CK   ++KA  LF +M                    +G+      LF  + 
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMV 410

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             G ++ D A+ + +++  C    + +A  +L  +  S   PDI  Y  +I+G C+ G +
Sbjct: 411 AHG-QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F  L  KGLRP+  TY  +INGL R    ++A ++F +M  NGC+P    Y ++
Sbjct: 470 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTI 529

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
                + ++   A  L  + L      D  +   + E L   +++ +++ +L 
Sbjct: 530 TQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILS 582



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 207/408 (50%), Gaps = 14/408 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G  KVG+   A+     M++ +CQPDV +Y ++++   + +    A  ++ +M
Sbjct: 176 TYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM 235

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P+I T++ LI+ L    + +    +L++M    I+P+   ++ V+  LC+  + 
Sbjct: 236 VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKI 295

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA+ +   M   G  P+ V YNAL++G C    +DEA+ +  +   +G+ P + SY+ L
Sbjct: 296 TEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTL 355

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  + +R D+A   + +M ++++ P+ V Y  ++      G+++DA+ L  +M   G 
Sbjct: 356 INGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQ 414

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD   Y  L+   C    LD+A +L   I   +  P+   +TI+I GMCR G ++ A+ 
Sbjct: 415 IPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARD 474

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F+ +   G  P+V  +  +I+GLC+ G L++AN LF +M+             G     
Sbjct: 475 IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD-------------GNGCSP 521

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           D  +  T+ +         +A ++L ++   G   D+ T   L+   C
Sbjct: 522 DGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 242/527 (45%), Gaps = 17/527 (3%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N  D+A   F +M      P  V +N LL    K ++     +L    +  G  P + + 
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+      R   A++   K+ +   +PD   +  +IRGL   GK+ DA+ L   M  
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G  P+   Y  LI G C +G  + A  L   + + +  P+   +T +I  +C++  V +
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  LF+KM   G  P +  + +LI  LC   E +    L  +M   K             
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK------------- 274

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            + D     T+V+  C  G I +A+ ++  +   G  P+++TYN+L++G C    ++ A+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           K+F  +   G  P+ ++Y TLING  ++ R + A  +F +M Q    P+   Y +LM   
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HX 393

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQL 635
           C   +   A +L+ + +      D  + + + ++L +K  ++ A+  L  ++    D  +
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YTI + G+C+ G+++ A +IFS L          +   +I+GLC+RG LD A  +F+ 
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
              NG    P  C Y   +    ++ + + A  LL  M + G+  D 
Sbjct: 514 MDGNG--CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADV 558



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 201/422 (47%), Gaps = 14/422 (3%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            +I+ L K    +   + L  +  GN      V+  +I    K     +A   F KM   
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 238

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              PD++ Y ++++       +     +  +M+    +P++V FS +++ L K GK   A
Sbjct: 239 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
             ++D M  RG+ PN  TY  ++ G C  +  DEA ++F  M  +G +P+ ++YN L+NG
Sbjct: 299 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 358

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           +CK++R+D+A  L     +   +P   +Y+ L+       R  +A A + +M      PD
Sbjct: 359 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPD 417

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +  Y +++  L +   + +AM LL  +    + PD   Y  +I G C  G L+ AR +  
Sbjct: 418 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS 477

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  +   PN  T+TI+I G+CR G++D+A KLF +M+  GC P    +N +  GL +  
Sbjct: 478 NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNK 537

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           E  +A  L  +M           L++G +   D ++   +VE  C   L     +IL + 
Sbjct: 538 EALRAIQLLQEM-----------LARGFSA--DVSTTTLLVEMLCDDKLDQSVKQILSEF 584

Query: 488 AE 489
            +
Sbjct: 585 VQ 586



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 1/184 (0%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F       ++   A+   ++  L K +  D     L  +   N+     ++ ++
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I G  + G+ E A + F  +     +P+V  Y  ++N   R+ L   A  ++ EM    C
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P+  T++ +  GL ++ +   AI++L EM  RG   +  T T+++  LC  ++ D++ +
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD-DKLDQSVK 578

Query: 225 LFLK 228
             L 
Sbjct: 579 QILS 582


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 175/694 (25%), Positives = 314/694 (45%), Gaps = 29/694 (4%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KRK     A+ + +I++L     F+     + ++     +     +  ++  Y K G  +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    MK      DV  YN +++   R         +  +M K    PN VT++ LI
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NG S  GK  +A ++L+EM   G+ PN  T+  +I G        EA ++F  M+  G +
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V+Y  LL+G CK    D A       +++G      +Y+ +IDGL +    DEA   
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M ++ I+PD+V Y  +I G  + G+ K A +++  +   G+ P+   Y+ LI   C 
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +G L +A  +   +       +  TF +L+  +C+ G V +A++    M   G  P+   
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F+ LI+G   +GE  KA  +F +M ++G +PT F              +  ++++  C  
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF--------------TYGSLLKGLCKG 631

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K L  L       D + YN+L+   CK GN+  A+ LF E+  + + PDS TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            +LI+GL R  +   A     +    G   P+  +Y   +    +  ++     ++ +  
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG--IYFREQ 749

Query: 594 RDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            D  G   + + +   I+ + + G++E     L EM  +     L  Y I L G  +   
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V  +  ++  ++    +    +C  L+ G+C+   L++ + +        FI R    + 
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL-----KAFICRGVEVDR 864

Query: 711 LLRSLLFSK--DNKKVH-AYHLLCRMKSVGYDLD 741
              ++L SK   N +++ A+ L+  M S+G  LD
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 55/596 (9%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            V+ +LI  Y + G  + +LE F  M  +   P VY  NA+L    +    +   +   E
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+K    P++ TF++LIN L   G  E +  ++ +M + G  P   TY  V+   C+  R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A  L   MK  G   D   YN L++  C+  R+ +   LLR   K    P   +Y+ 
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G     +   A     +M    + P+ V +  +I G    G  K+A+K+   M  +G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    Y  L+ G C     D AR   + + +        T+T +I G+C+NG +D+A 
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIGKNPTLFLRLSQGG 455
            L N+M K G  P +  ++ALI+G CK G  + A  +    Y++ +  N  ++       
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY------- 516

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T++   C  G + +A +I   +   G+  D  T+N L+   CK G +  A
Sbjct: 517 ---------STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +  + +   G+ P++V++  LING         AF +F +M + G  P+   Y SL+  
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQ 634
            C+                         ++  E+FL+    V  A+  ++          
Sbjct: 628 LCK----------------------GGHLREAEKFLKSLHAVPAAVDTVM---------- 655

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
              Y   L  +C+ G + +A+++F  +V+   +    +   LI GLC++G   +A+
Sbjct: 656 ---YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 190/758 (25%), Positives = 318/758 (41%), Gaps = 102/758 (13%)

Query: 59   RLRSFASNSAVISMLLKPNGFD------LYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            R R    N    + L+  NGF       +  Q L+E+ S  +S     F  LI G+   G
Sbjct: 330  RKRMIHPNEVTYNTLI--NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            + ++AL+ F  M+     P    Y  +L+   +   F LA   Y  M +       +T++
Sbjct: 388  NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR-------------- 218
             +I+GL K+G  + A+ +L+EM++ GI P+  TY+ +I+G C++ R              
Sbjct: 448  GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507

Query: 219  ---------------------ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                                   EA R++  M   G + D   +N L+   CK  +V EA
Sbjct: 508  GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567

Query: 258  LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
               +R    DG +P   S+ CLI+G   +    +A++ + +M +    P    YG +++G
Sbjct: 568  EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627

Query: 318  LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            L + G +++A K L  +       DT  YN L+   C  G L +A SL  E+ +R  LP+
Sbjct: 628  LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687

Query: 378  THTFTILICGMCRNG-------MVDDAQKLFN---------------------------- 402
            ++T+T LI G+CR G          +A+   N                            
Sbjct: 688  SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747

Query: 403  -KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNR- 457
             +M+  G  P +   NA+IDG  + G++EK N L  +M     G N T +  L  G ++ 
Sbjct: 748  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807

Query: 458  ------------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                              + DK +  ++V   C + ++    KIL      G   D  T+
Sbjct: 808  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867

Query: 500  NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            N LI+  C  G IN A  L K +   G+  D  T   +++ L R  R +++  +  +M +
Sbjct: 868  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927

Query: 560  NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             G +P    Y  L+   CR      AF +  + +       + +  ++   L K    + 
Sbjct: 928  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987

Query: 620  IQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
               LL    K+     +A +T  +   C++G V EAL +  V+  C   +   S   LI 
Sbjct: 988  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1047

Query: 679  GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            GLC +G + LA +++     +GF+        L+R LL
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 35/196 (17%)

Query: 68   AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE------------ 115
            A++S+L + + F      L E+    +S  S  +  LI+G  +VGD +            
Sbjct: 904  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963

Query: 116  -------------KALESFGKMKE----------FDCQPDVYIYNAVLNIAFRKQLFLLA 152
                         +AL   GK  E              P +  +  ++++  +    + A
Sbjct: 964  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023

Query: 153  LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            L +   M       ++V++++LI GL   G   +A ++ +EM   G L N  TY  +I G
Sbjct: 1024 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083

Query: 213  LCQINRADEAYRLFLK 228
            L     A     + LK
Sbjct: 1084 LLARETAFSGADIILK 1099


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 223/456 (48%), Gaps = 13/456 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++AL +F +M      P    +N +L    + +     L++  +M      P++ T +++
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L    + + A   L ++ + G  P+  T+T +I GLC   +  EA  LF KM   G 
Sbjct: 87  INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK R+V EA  +       G  P + +Y+ LI GL +   +     
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M + KI PDV     ++  L + G V +A  ++  M  RG+ P+   YNAL+ G C
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 266

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               +D A  +   +  +D + N  ++  LI G C+   VD A  LF +M +    P+  
Sbjct: 267 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 326

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI GLC  G L+ A  LF++M           +++G  ++ D  + +T+ +  C  
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEM-----------VARG--QIPDLVTYRTLSDYLCKN 373

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + KA  +L  +  S   PDI  Y ++++G C+ G +  A  LF  L  KGL+P+  TY
Sbjct: 374 RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTY 433

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
             +I+GL +     +A ++F +M +NGC+P+   Y 
Sbjct: 434 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 207/439 (47%), Gaps = 13/439 (2%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M  F   PDVY    V+N          A +   +++KL   P+  TF+ LI GL   G
Sbjct: 70  QMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   A+ + D+M   G  PN  TY  +I+GLC+  +  EA+ +F +M   G SP+ V YN
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +L++G CKL        L+        +P + + + ++D L +     EA+     M   
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 249

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            +EP+VV Y  ++ G     +V  A+K+   M  +  V +   YN LI G+C +  +D+A
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 309

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  E+ +++  PNT T+  LI G+C  G + DA  LF++M   G  P +  +  L D 
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCK   L+KA  L   +E             G N   D     T+++  C AG +  A  
Sbjct: 370 LCKNRHLDKAMALLKAIE-------------GSNWDPDIQIYTTILDGMCRAGELEDARD 416

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +   L+  G  P++ TYN +I+G CK G +  A KLF E+   G  P+  TY  +  G  
Sbjct: 417 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 476

Query: 543 RVDREEDAFRIFGQMPQNG 561
           R +       +  +M   G
Sbjct: 477 RNNEALRTIELLEEMLARG 495



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 173/677 (25%), Positives = 293/677 (43%), Gaps = 47/677 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+ L   N  D  +  L ++        +  F  LI G    G   +AL  F KM  
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP+V  Y  ++N   + +    A  ++ EM+     PNIVT++ LI+GL K  + + 
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +++EM    I+P+ FT   V+  LC+     EA+ +   M   G  P+ V YNAL++
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C    VD A+ +  +      V  + SY+ LI+G  + +  D+A   + +M  +++ P
Sbjct: 264 GHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTP 323

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y  +I GL   G+++DA+ L  +M  RG +PD   Y  L    C    LD+A +L 
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             I   +  P+   +T ++ GMCR G ++DA+ LF+ +   G  P+V  +N +I GLCK 
Sbjct: 384 KAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQ 443

Query: 427 GELEKANLLFYKM-EIGKNPTL---------FLRLSQGGNRVH------------DKASL 464
           G L +A+ LF +M + G +P           FLR ++    +             D ++ 
Sbjct: 444 GLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTT 503

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESG--------NLPDIITYNSLINGFCKVGNIN--- 513
             +V      GL     +IL + + S         +LP +   +S  +   +  + N   
Sbjct: 504 TLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLD 563

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL  F  +      P +V +  L+  + ++        +  QM   G  P       L+
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C  R+   AFS+  + L+         +    + +  G + N   GL +M  K    
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLK---------LGFQPDVVTYGTLMN---GLCKMITKGISP 671

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +  Y   +  LC   + K    + + +V  K +        ++  LCK G + +A DV 
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 694 LYTLKNGFILRPRVCNY 710
              +K G  + P V  Y
Sbjct: 732 DMMIKRG--VEPDVVTY 746



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 245/541 (45%), Gaps = 55/541 (10%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  DEA   F +M      P  V +N LL    K +     L+L R  +  G  P + 
Sbjct: 22  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I+ L    R D A++   K+ +   +PD   +  +IRGL   GK+ +A+ L   M
Sbjct: 82  TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  P+   Y  LI G C    + +A ++  E+  +   PN  T+  LI G+C+    
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQ 453
                L N+M  +   P V   N ++D LCK G + +A+ +   M   G  P +      
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNV------ 255

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   +++ +C    +  A K+   +     + ++I+YN+LING+CK+ +++
Sbjct: 256 --------VTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 307

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+ LF+E+  + L P++VTY TLI+GL  V R +DA  +F +M   G  P    Y++L 
Sbjct: 308 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 367

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
            + C+ R    A +L    L+ I G + +                             D 
Sbjct: 368 DYLCKNRHLDKAMAL----LKAIEGSNWDP----------------------------DI 395

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           Q+  YT  L G+C+ G++++A ++FS L          +   +IHGLCK+G L  A  +F
Sbjct: 396 QI--YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 453

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLP 753
               KNG    P  C Y L +  F ++N+ +    LL  M + G+ +D      T +LL 
Sbjct: 454 SEMNKNG--CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV----STTTLLV 507

Query: 754 G 754
           G
Sbjct: 508 G 508



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 168/676 (24%), Positives = 285/676 (42%), Gaps = 49/676 (7%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  K+ + +       +M +    PDV+  N V++   ++ +   A  V   M+   
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT++ L++G     + +VA+K+ D M  +  + N  +Y  +I+G C+I   D+A 
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M     +P+ V YN L++G C + R+ +A++L       G +P L +Y  L D L
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 370

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + +  D+A A  + +     +PD+ +Y  ++ G+  AG+++DA  L S++  +G+ P+ 
Sbjct: 371 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + YN +I G C  GLL +A  L  E+ K    PN  T+ ++  G  RN       +L  +
Sbjct: 431 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP------------------ 445
           M   G    V     L+  L   G  +    +  K      P                  
Sbjct: 491 MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHN 550

Query: 446 ----------TLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAES---- 490
                     TL   LS     +H      T+   +  T+    K Y  ++ L+      
Sbjct: 551 SLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSF 610

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  PD+ T N LIN FC +  +  A  +  +L   G +PD VTYGTL+NGL +       
Sbjct: 611 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK------- 663

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
                 M   G +P    Y SL+   C   ++    +L  + +      +     ++ + 
Sbjct: 664 ------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 717

Query: 611 LQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           L K  +      +++M  K   +  +  YT  + G C   ++ EA+ +F  +V    +  
Sbjct: 718 LCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 777

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             S   LI+G C+   +D AM +       G I      N L+  L      +  HA  L
Sbjct: 778 VRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV--GRLQHAIAL 835

Query: 730 LCRMKSVGYDLDACLY 745
              M + G   D   Y
Sbjct: 836 FHEMVASGQIPDLVTY 851



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/695 (22%), Positives = 275/695 (39%), Gaps = 141/695 (20%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           Q     F     R ++    +   +   L K    D     L  +   N      ++  +
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           + G  + G+ E A + F  +     QP+V+ YN +++   ++ L   A  ++ EM K  C
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC---------- 214
            PN  T++L+  G  ++ +    I++L+EM  RG   +  T T+++  L           
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 521

Query: 215 ------------------------------------QINRADEAYRLFLKMKDSGCSPDF 238
                                                 N  D+A   F +M      P  
Sbjct: 522 ILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPST 581

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V +  LL    K++     L+L    +  G  P + + + LI+     +R   A++   K
Sbjct: 582 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 641

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           + +   +PDVV YG ++ GL +             M  +GI PD + YN+LI   C+L  
Sbjct: 642 LLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCE 688

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
                +L  E+     +PN   F+ ++  +C+ GM+  A  + + M K G  P V  + A
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L+DG                                                +C    + 
Sbjct: 749 LMDG------------------------------------------------HCLRSEMD 760

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A K+   +   G +P++ +YN LING+C++  ++ A+ L +++ L+GL  D+VTY TLI
Sbjct: 761 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +GL  V R + A  +F +M  +G  P    Y+ L+ + C+    + A  L    L+ I G
Sbjct: 821 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL----LKAIEG 876

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            +                       L+ D  +       Y I + G+C+ G+++ A ++F
Sbjct: 877 SN-----------------------LDADILV-------YNIAIDGMCRAGELEAARDLF 906

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           S L          +   +IHGLCKRG LD A  +F
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 194/410 (47%), Gaps = 28/410 (6%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL+ +  M+ ++  P+ V F+ L+  ++K       + +  +M   GI P+ +T  I+I+
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C + R   A+ +  K+   G  PD V Y  L+NG CK+                G  P
Sbjct: 625 SFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMI-------------TKGISP 671

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LI  L     +        +M   KI P+VV++  ++  L + G +  A  ++
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   Y AL+ G C    +D+A  +   +  +  +PN  ++ ILI G C+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
             +D A  L  +M   G       +N LI GLC  G L+ A  LF++M            
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM------------ 839

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVG 510
                ++ D  + + +++  C    + +A  +L++  E  NL  DI+ YN  I+G C+ G
Sbjct: 840 -VASGQIPDLVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAG 897

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +  A  LF  L  KGL+PD  TY  +I+GL +    ++A ++F +M +N
Sbjct: 898 ELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/719 (21%), Positives = 289/719 (40%), Gaps = 112/719 (15%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           V  + F     +  + +  S + +I+   K    D      +E+    ++  +  +  LI
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
            G   VG  + A+  F +M      PD+  Y  + +   + +    A+A+   +   N  
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  ++ +++G+ ++G+ E A  +   ++ +G+ PN +TY I+I GLC+     EA +L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI----- 280
           F +M  +GCSP+   YN +  GF +       + LL      GF   + + + L+     
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 281 DGLFRAKR-----------------------------------------YDEAYAWYRKM 299
           DGL ++ +                                          D+A + + +M
Sbjct: 513 DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM 572

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                 P  V +  ++  +++       + L + M   GI PD Y  N LI  FC L  L
Sbjct: 573 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 632

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             A S+  ++ K    P+  T+  L+ G+C             KM   G  P +  +N+L
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSL 679

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           I  LC   E +    L  +M   +I  N  +F                 T+V+  C  G+
Sbjct: 680 IHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF----------------STVVDALCKEGM 723

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           I  A+ ++  + + G  PD++TY +L++G C    ++ A+K+F  +  KG  P+  +Y  
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LING  ++ R + A  +  QM   G       Y +L+   C   +   A +L+       
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF------- 836

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
                       E +  G++ + +   + +D+   +  LA   + L  + +   +   + 
Sbjct: 837 -----------HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI-EGSNLDADIL 884

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           ++++ ++               G+C+ G L+ A D+F      G     R  N ++  L
Sbjct: 885 VYNIAID---------------GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 152/284 (53%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM      PD++ YN++++       +     +  EMV    +PN+V FS +++ L K G
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
              +A  ++D M +RG+ P+  TYT ++ G C  +  DEA ++F  M   GC P+  +YN
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L+NG+C+++R+D+A+ LL      G +    +Y+ LI GL    R   A A + +M   
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              PD+V Y +++  L +   + +AM LL  +    +  D   YN  I G C  G L+ A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           R L   +  +   P+  T+ I+I G+C+ G++D+A KLF KM++
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 182/390 (46%), Gaps = 26/390 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K+      L    +M  F   PDVY  N ++N     +    A +V  +++
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P++VT+  L+NGL K             M  +GI P+ FTY  +I  LC +    
Sbjct: 644 KLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWK 690

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
               L  +M +S   P+ V ++ +++  CK   +  A  ++    K G  P + +Y+ L+
Sbjct: 691 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG       DEA   +  M  +   P+V  Y ++I G  +  ++  AM LL  M  +G++
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            DT  YN LI G C +G L  A +L  E+     +P+  T+ IL+  +C+N  + +A  L
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 870

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
              +E +     + ++N  IDG+C+AGELE A              LF  LS  G +  D
Sbjct: 871 LKAIEGSNLDADILVYNIAIDGMCRAGELEAAR------------DLFSNLSSKGLQP-D 917

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAES 490
             +   M+   C  GL+ +A K+  ++ E+
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 135/249 (54%), Gaps = 5/249 (2%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+V +++ V++   ++ +  +A  V   M+K    P++VT++ L++G     + + A+K+
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D M  +G +PN  +Y I+I+G CQI R D+A  L  +M   G   D V YN L++G C 
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           + R+  A+AL       G +P L +Y  L+D L +     EA    + +    ++ D+++
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILV 885

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL----- 365
           Y + I G+  AG+++ A  L S++  +G+ PD   YN +I G C  GLLD+A  L     
Sbjct: 886 YNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945

Query: 366 QVEIWKRDS 374
           + +IW   +
Sbjct: 946 ENDIWSNST 954


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/469 (31%), Positives = 235/469 (50%), Gaps = 14/469 (2%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K G+ E+  +  G+M+   C+PDV  YNA++N   +      A + + EM +  
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            + N+VTFS  ++   K+G    A+K+  +M  +G+ PN+ TYT ++ G C+  R D+A 
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDAL 354

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M   G   + V Y  L++G CK  +V EA  + R  E+ G       Y+ LI G 
Sbjct: 355 VLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGH 414

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F  K  + A +   +M ++ +E DV LYG +I GL    K+ +A  LL+ M E G+ P+ 
Sbjct: 415 FVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNN 474

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  ++          +A +L  ++      PN  T+  L+ G+C+ G +D+A   FNK
Sbjct: 475 VIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNK 534

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M   G  P+V  + AL+DGLCK G L+KA LL  +M I K  +L            D   
Sbjct: 535 MVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEM-IDKGMSL------------DNVV 581

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             ++++ +   G +  A+ +  ++  SG   D+  Y   + GFC +  I  A ++  E+ 
Sbjct: 582 CTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ-NGCTPSPAVYKS 571
             G+ PD+V Y  LIN  Q++   E+A  +  +M     CT + A   S
Sbjct: 642 ENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESLLSCTNADAASGS 690



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 245/503 (48%), Gaps = 19/503 (3%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L +    +L W+  ++L + NV      F ++I    K GD  +A     +MK   C PD
Sbjct: 173 LARERSSELAWRLFEQLPAPNVFT----FNIMIDFLCKEGDLAEARALLARMKAIGCSPD 228

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           V  YN++++   +         +  EM    C P++VT++ L+N   K G+ E A     
Sbjct: 229 VVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFA 288

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM + G++ N  T++  +   C+     EA +LF +M+  G  P+ V Y  L++G CK  
Sbjct: 289 EMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAG 348

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+D+AL L     + G    + +Y+ L+DGL +  +  EA   +R M    I  + +LY 
Sbjct: 349 RLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYT 408

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I G       + A+ LLS+M+++G+  D   Y ALI G C+L  LD+A+SL  ++ + 
Sbjct: 409 TLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDEC 468

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN   +T ++    +     +A  L  KM  +G  P++  + AL+DGLCKAG +++A
Sbjct: 469 GLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528

Query: 433 NLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
              F KM ++G  P +               +   +V+  C  G + KA  +L ++ + G
Sbjct: 529 ISHFNKMVDLGLEPNV--------------QAYTALVDGLCKNGRLDKAVLLLDEMIDKG 574

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              D +   SL++G  K GN+  A  L  ++   GL+ D   Y   + G   ++  ++A 
Sbjct: 575 MSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAR 634

Query: 552 RIFGQMPQNGCTPSPAVYKSLMT 574
            +  +M +NG TP   VY  L+ 
Sbjct: 635 EVLSEMIENGITPDAVVYNCLIN 657



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 259/526 (49%), Gaps = 23/526 (4%)

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
           +LALA   E   L   PN  T + ++  L++   +E+A ++ +++      PN FT+ I+
Sbjct: 148 VLALARVRE---LRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIM 200

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I  LC+     EA  L  +MK  GCSPD V YN+L++G+ K   ++E   L+      G 
Sbjct: 201 IDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGC 260

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ L++   +  R + AY+++ +M  E +  +VV +   +    + G V++AMK
Sbjct: 261 RPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMK 320

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L + MR +G+ P+   Y  L+ G C  G LD A  L  E+ ++    N  T+T+L+ G+C
Sbjct: 321 LFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLC 380

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G V +A+ +F  ME+AG   +  ++  LI G       E+A  L  +M   K+  + L
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM---KDKGMEL 437

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            +S  G  +    +LQ + E          A  +L ++ E G  P+ + Y ++++   K 
Sbjct: 438 DVSLYGALIWGLCNLQKLDE----------AKSLLNKMDECGLKPNNVIYTNIMDACFKA 487

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
              + A+ L +++   G RP+ VTY  L++GL +    ++A   F +M   G  P+   Y
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDF 628
            +L+   C+  +   A  L  + +      D+    S+ +  L++G +++A     +M  
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN 607

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
                 L  YT ++ G C    ++EA  + S ++E    +TP + V
Sbjct: 608 SGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG--ITPDAVV 651



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 242/546 (44%), Gaps = 55/546 (10%)

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           +R  LP+      ++S L      D+A     ++++    P+    N +L   C  R   
Sbjct: 123 RRSALPS--VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL--LCLARERS 178

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
             LA  R FE+    P + +++ +ID L +     EA A   +M      PDVV Y  +I
Sbjct: 179 SELAW-RLFEQLP-APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI 236

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  + G++++  KL+ +MR  G  PD   YNAL+  FC  G +++A S   E+ +   +
Sbjct: 237 DGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            N  TF+  +   C+NGMV +A KLF +M   G  P+   +  L+DG CKAG L+ A +L
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +M     P              +  +   +V+  C  G + +A  +   +  +G   +
Sbjct: 357 TNEMVQQGVPL-------------NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRAN 403

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            + Y +LI+G     N   AL L  E++ KG+  D   YG LI GL  + + ++A  +  
Sbjct: 404 ELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLN 463

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M + G  P+  +Y ++M    + RK S A +L                           
Sbjct: 464 KMDECGLKPNNVIYTNIMDACFKARKESEAIAL--------------------------- 496

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
               +Q +++  F+ N   +  Y   + GLC+ G + EA++ F+ +V+        +   
Sbjct: 497 ----LQKMMDSGFRPN---IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           L+ GLCK G LD A+ +    +  G  L   VC  L+   L  K      A+ L  +M +
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHL--KQGNLQDAFALKAKMIN 607

Query: 736 VGYDLD 741
            G  LD
Sbjct: 608 SGLQLD 613



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 179/409 (43%), Gaps = 70/409 (17%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+++   K    +  +    E++   V      F   +  + K G   +A++ F +M+ 
Sbjct: 268 NALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRM 327

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK--- 183
              +P+   Y  +++   +      AL +  EMV+     N+VT+++L++GL K GK   
Sbjct: 328 KGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAE 387

Query: 184 --------------------------------TEVAIKMLDEMTQRGILPNKFTYTIVIS 211
                                           +E A+ +L EM  +G+  +   Y  +I 
Sbjct: 388 AEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIW 447

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC + + DEA  L  KM + G  P+ V Y  +++   K R+  EA+ALL+     GF P
Sbjct: 448 GLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRP 507

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y  L+DGL +A   DEA + + KM +  +EP+V  Y  ++ GL + G++  A+ LL
Sbjct: 508 NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567

Query: 332 SDMRERGIVPDT-----------------------------------YCYNALIKGFCDL 356
            +M ++G+  D                                    Y Y   + GFC+L
Sbjct: 568 DEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNL 627

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
            ++ +AR +  E+ +    P+   +  LI    + G +++A  L N+ME
Sbjct: 628 NMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/632 (24%), Positives = 297/632 (46%), Gaps = 17/632 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +V   +  L   G++ +    PD + Y+ +       ++   A  ++ EM
Sbjct: 178 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDK-AHCLFLEM 236

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++   LP I+  + +I  L K  + + A  ++ +M   GI P+ FTY+++I GLC+    
Sbjct: 237 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 296

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A R+  +M ++G  P+ + YN+L++G+      +E++ + +     G +P + + +  
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE-AGKVKDAM--KLLSDMRE 336
           I  LF+  R +EA   +  M  +  +PD++ Y      +      V   M   + + M  
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLT 416

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +GI P+ + +N LI  +   G++D+A  +  ++  +  +P+T TF  +I  +CR G +DD
Sbjct: 417 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A   FN M   G  PS  ++  LI G C  GEL KA  L  +M     P   ++      
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY----- 531

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    +++   C  G + +   I+  + ++G  P+++T+NSL+ G+C VGN+  A 
Sbjct: 532 -------FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 584

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L   +   G+ P+   YGTL++G  +  R +DA  +F  M   G  P+  +Y  ++   
Sbjct: 585 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 644

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQL 635
            + R+ + A  ++ + +   +     +   +   L +    +    LLE  F +N  F +
Sbjct: 645 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 704

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             + I +  + + G+ +EA  +F  +     +    +   +I  L K    + A ++F+ 
Sbjct: 705 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 764

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
             K+G     R+ N+++R LL   +  K   Y
Sbjct: 765 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNY 796



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 250/567 (44%), Gaps = 24/567 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I G  K    +KA     +M E   +P+   YN++++      ++  ++ V+ +M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P +   +  I+ L K G+T  A  + D M  +G  P+  +Y+   S +C     
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401

Query: 220 ---DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                 + +F  M   G +P+   +N L+N + +   +D+A+ +    +  G +P   ++
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 461

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  L R  R D+A   +  M +  + P   +YG +I+G    G++  A +L+S+M  
Sbjct: 462 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 521

Query: 337 RGIVPDTYCY-NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + I P    Y +++I   C  G + + + +   + +    PN  TF  L+ G C  G ++
Sbjct: 522 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 581

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           +A  L + M   G  P+  ++  L+DG CK G ++ A  +F  M   G  PT  L     
Sbjct: 582 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL----- 636

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                       ++     A     A K+  ++ ESG    I TY  ++ G C+    + 
Sbjct: 637 ---------YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDE 687

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  L ++L    ++ D +T+  +I+ + +V R ++A  +F  +   G  P+   Y  ++T
Sbjct: 688 ANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMIT 747

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDF 633
              +   +  A +L++   +     D   +  I    L K EV  A   L  +    N+ 
Sbjct: 748 NLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIG--ENNL 805

Query: 634 QLAPYTIWLIG--LCQDGQVKEALNIF 658
            L   TI L+     ++G+ +E + + 
Sbjct: 806 TLEASTISLLASLFSREGKYREHIKLL 832



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 111/246 (45%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD + S  +     ++  L+ GY K G  + AL  F  M     +P   +Y+ +L+  F+
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 646

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  +++EM++     +I T+ +++ GL ++  T+ A  +L+++    +  +  T
Sbjct: 647 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 706

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + IVIS + ++ R  EA  LF  +   G  P+   Y+ ++    K    +EA  L  S E
Sbjct: 707 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 766

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G        + ++  L       +A  +   + E  +  +     ++    S  GK +
Sbjct: 767 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 826

Query: 326 DAMKLL 331
           + +KLL
Sbjct: 827 EHIKLL 832


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 226/449 (50%), Gaps = 59/449 (13%)

Query: 129 CQPDVYIYNA-VLNIAFRKQL---FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           C+PDV  YNA V       QL     L  A+  E       P+  T++ LI GL   G+T
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME-------PDTYTYNTLIRGLCGRGRT 168

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A+ +LD+M +RG +P+  TYTI++   C+ +   +A +L  +M+D GC+PD V YN +
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVV 228

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG C+  RVD+A+  L+S    G  P   SY+ ++ GL  A+R+++A     +M  +  
Sbjct: 229 VNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+VV + ++I  L   G V+ AM++L  + + G  P++  YN ++  FC    +D+A +
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
               +      P+  ++  L+  +CR G VD A +L ++++  GC P +  +N +IDGL 
Sbjct: 349 FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 408

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           KAG+ E+A                                                 ++L
Sbjct: 409 KAGKTEEA------------------------------------------------LELL 420

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++   G  PDIITY+++ +G C+ G I  A+K F ++Q  G+RP++V Y  ++ GL + 
Sbjct: 421 NEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
                A  +F  M  NGC P+ + Y  L+
Sbjct: 481 RATHSAIDLFTYMVSNGCMPNESTYTILI 509



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 228/457 (49%), Gaps = 24/457 (5%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI  L  SG+T  A ++L         P+  +Y  +++G C   + D A RL   M  
Sbjct: 94  AALIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMP- 147

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               PD   YN L+ G C   R D ALA+L    + G VP + +Y+ L++   +   Y +
Sbjct: 148 --MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 205

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A     +M ++   PD+V Y V++ G+ + G+V DAM+ L  +   G  P+T  YN ++K
Sbjct: 206 AVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLK 265

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C     + A  L  E+ ++   PN  TF +LI  +CR G+V+ A ++ +++ K GC P
Sbjct: 266 GLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +   +N ++   CK  ++++A               F+ L        D  S  T++   
Sbjct: 326 NSLSYNPILHAFCKQKKMDRA-------------MAFVELMVSSGCYPDIVSYNTLLTAL 372

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G +  A ++L QL + G  P +I+YN++I+G  K G    AL+L  E+  KGL+PD 
Sbjct: 373 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDI 432

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TY T+ +GL R  R E+A + F ++   G  P+  +Y +++   C+RR    A  L+  
Sbjct: 433 ITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLF-T 491

Query: 592 YLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y+       +ES  +  IE    +G V+ A + + E+
Sbjct: 492 YMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 238/531 (44%), Gaps = 68/531 (12%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKF-TYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           L + G  E AI++++ M   G+ P+       +I  LC   R  EA R+      + C P
Sbjct: 66  LVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVL-----ASCEP 118

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D ++YNA++ G+C   ++D A  L+ +   +   P   +Y+ LI GL    R D A A  
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVL 175

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M      PDVV Y +++    +    K A+KLL +MR++G  PD   YN ++ G C  
Sbjct: 176 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +D A      +      PNT ++ I++ G+C     +DA+KL  +M + G  P+V  F
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N LI  LC+ G +E A  +  ++ + G  P              +  S   ++  +C   
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTP--------------NSLSYNPILHAFCKQK 341

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A   +  +  SG  PDI++YN+L+   C+ G ++ A++L  +L+ KG  P  ++Y 
Sbjct: 342 KMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYN 401

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           T+I+GL +  + E+A  +  +M   G  P    Y ++ +  CR                 
Sbjct: 402 TVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR----------------- 444

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW----LIGLCQDGQV 651
                            +G +E AI+       K+ D  + P T+     L+GLC+    
Sbjct: 445 -----------------EGRIEEAIKAFC----KVQDMGIRPNTVLYNAILLGLCKRRAT 483

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             A+++F+ +V    +    +   LI GL   G +  A ++       G +
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 175/334 (52%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K +G+    + LDE+R    +     + V+++G  + G  + A+E    +  + C+P+  
Sbjct: 199 KRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTV 258

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN VL      + +  A  +  EM +    PN+VTF++LI+ L + G  E A+++LD++
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G  PN  +Y  ++   C+  + D A      M  SGC PD V+YN LL   C+   V
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D A+ LL   +  G  P L SY+ +IDGL +A + +EA     +M  + ++PD++ Y  +
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
             GL   G++++A+K    +++ GI P+T  YNA++ G C       A  L   +     
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +PN  T+TILI G+   G+V +A+++  ++   G
Sbjct: 499 MPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 193/392 (49%), Gaps = 13/392 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G    G  + AL     M    C PDV  Y  +L    ++  +  A+ +  EM
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++++NG+ + G+ + A++ L  +   G  PN  +Y IV+ GLC   R 
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A +L  +M   G  P+ V +N L++  C+   V+ A+ +L    K G  P   SY+ +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +    + K+ D A A+   M      PD+V Y  ++  L   G+V  A++LL  ++++G 
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN +I G    G  ++A  L  E+  +   P+  T++ +  G+CR G +++A K
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            F K++  G  P+  ++NA++ GLCK      A  LF  M           +S G   + 
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYM-----------VSNGC--MP 500

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           ++++   ++E     GL+ +A +++ +L   G
Sbjct: 501 NESTYTILIEGLAYEGLVKEAREMMAELCSRG 532



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 186/353 (52%), Gaps = 1/353 (0%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D LR G V  V   + +L+    K    ++A++   +M++  C PD+  YN V+N   ++
Sbjct: 177 DMLRRGCVPDVV-TYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQE 235

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A+     +    C PN V++++++ GL  + + E A K++ EM+++G  PN  T+
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            ++IS LC+    + A  +  ++   GC+P+ ++YN +L+ FCK +++D A+A +     
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + SY+ L+  L R    D A     ++ ++   P ++ Y  +I GL++AGK ++
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A++LL++M  +G+ PD   Y+ +  G C  G +++A     ++      PNT  +  ++ 
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G+C+      A  LF  M   GC P+   +  LI+GL   G +++A  +  ++
Sbjct: 476 GLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 128/252 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LIS   + G  E A+E   ++ ++ C P+   YN +L+   +++    A+A    M
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 353

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V   C P+IV+++ L+  L + G+ + A+++L ++  +G  P   +Y  VI GL +  + 
Sbjct: 354 VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 413

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  +M   G  PD + Y+ + +G C+  R++EA+      +  G  P    Y+ +
Sbjct: 414 EEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAI 473

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL + +    A   +  M      P+   Y ++I GL+  G VK+A ++++++  RG+
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533

Query: 340 VPDTYCYNALIK 351
           V  T      I+
Sbjct: 534 VSKTLVNKGAIR 545



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 137/269 (50%), Gaps = 4/269 (1%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           +     +++ R  +  + + +IS L +    +   + LD++     +  S  +  ++  +
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            K    ++A+     M    C PD+  YN +L    R      A+ + +++    C P +
Sbjct: 338 CKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVL 397

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           ++++ +I+GL+K+GKTE A+++L+EM  +G+ P+  TY+ + SGLC+  R +EA + F K
Sbjct: 398 ISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCK 457

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           ++D G  P+ V YNA+L G CK R    A+ L      +G +P   +Y+ LI+GL     
Sbjct: 458 VQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLA---- 513

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           Y+      R+M  E     VV   ++ +G
Sbjct: 514 YEGLVKEAREMMAELCSRGVVSKTLVNKG 542



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 17/266 (6%)

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++++ C +G   +A ++L         PD+++YN+++ G+C  G ++ A +L   + ++ 
Sbjct: 96  LIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME- 149

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             PD+ TY TLI GL    R ++A  +   M + GC P    Y  L+  +C+R  +  A 
Sbjct: 150 --PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 587 SLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
            L L  +RD     D    ++      Q+G V++A++ L  +     +     Y I L G
Sbjct: 208 KL-LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGF 701
           LC   + ++A  + +   E      PP+ V    LI  LC+RG ++ AM++     K G 
Sbjct: 267 LCTAERWEDAEKLMA---EMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAY 727
                  N +L +    K   +  A+
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAF 349


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 243/456 (53%), Gaps = 17/456 (3%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F +M+    Q +    N ++N     +    A +V+ +++KL   P+I+T++ LI GL  
Sbjct: 72  FQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCL 131

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G+ + ++   D +  +GI  +  +Y  +I+GLC+I +   A RL  K++   C PD V 
Sbjct: 132 NGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVM 191

Query: 241 YNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           YN +++G CK + V +A  L    FEK  F P + +Y+ LI G     + D+A+    +M
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVF-PNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + + P+V  +  ++ GL + GK+++A  L++ M + G+ PD + YNAL+ G+  +   
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A+++   + +     + H+++++I G+ +  M+D+A  LF  M      P V  +++L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           IDGLCK+G +  A     +M + G+ P +               +  ++++  C +  + 
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVI--------------TYTSLIDALCKSHQVD 416

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KA  +L ++ + G   ++ TYN L++G CK G +  A K+F++L +KG   D VTY  +I
Sbjct: 417 KAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMI 476

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           NGL +    ++A  +  +M   GC P    Y++++ 
Sbjct: 477 NGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 231/508 (45%), Gaps = 47/508 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+  +  M+++   P I+ F  ++  L K+    + I +   M   GI  N  T  I+I+
Sbjct: 33  AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C + + + A+ +F K+   G  PD + Y  L+ G C   +V E+L         G   
Sbjct: 93  SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY  LI+GL +  +   A    RK+  E   PDVV+Y  +I GL +   V+DA  L 
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M E+ + P+   Y +LI GFC +G LD+A  L  E+  ++  PN  TF  L+ G+C+ 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G + +A+ L   M K G  P V  +NAL+DG             F   E GK   +F  +
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGY------------FLVKEAGKAKNVFNIM 320

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           +Q G    D  S   M+       ++ +A  +   +     +PD++ Y+SLI+G CK G 
Sbjct: 321 AQMGVTC-DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           IN ALK   E+  +G  P+ +TY +LI+ L +  + + A  +  ++   G   +   Y  
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+                   GR  ++ K  ++ L KG                +
Sbjct: 440 LVDGLCK------------------DGRLTDAQKVFQDLLMKG----------------H 465

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           +  +  Y+I + GLC++    EAL + S
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLS 493



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 228/458 (49%), Gaps = 19/458 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ Y  +     A   F K+ +   QPD+  Y  ++           +L  +  +V  
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               + V++  LINGL K G+T  A+++L ++      P+   Y  +I GLC+     +A
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + L+ +M +    P+ V Y +L+ GFC + ++D+A  LL         P + +++ L+DG
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG---LSEAGKVKDAMKLLSDMRERGI 339
           L +  +  EA +    M +E + PDV  Y  ++ G   + EAGK K+   +++ M   G+
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM---GV 325

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D + Y+ +I G   + +LD+A  L   +   + +P+   ++ LI G+C++G ++ A K
Sbjct: 326 TCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALK 385

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             ++M   G  P+V  + +LID LCK+ +++KA  L  K++            QG     
Sbjct: 386 YVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK-----------DQGIQA-- 432

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +   +V+  C  G +  A K+   L   G+  D++TY+ +ING CK    + AL L 
Sbjct: 433 NMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLL 492

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            +++ KG  PD++ Y T+IN     D  + A ++  +M
Sbjct: 493 SKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 208/409 (50%), Gaps = 13/409 (3%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D L S  + +    +  LI+G  K+G    AL    K++   C+PDV +YN +++   + 
Sbjct: 143 DRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +L   A  +Y EM +    PN+VT++ LI G    G+ + A  +L+EM  + + PN  T+
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ GLC+  +  EA  L   M   G  PD   YNAL++G+  ++   +A  +     +
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G    + SYS +I GL + K  DEA   +  M  E + PDVV Y  +I GL ++G++  
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+K + +M +RG  P+   Y +LI   C    +D+A +L  +I  +    N +T+ IL+ 
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G+C++G + DAQK+F  +   G    V  ++ +I+GLCK    ++A  L  KME      
Sbjct: 443 GLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME------ 496

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
                 +G   V D  + +T++  +    +  KA K+L ++ +  +  D
Sbjct: 497 -----DKGC--VPDAIAYETIINAFFEKDMNDKAEKLLREMIDCVDYKD 538



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 234/505 (46%), Gaps = 49/505 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI   + M +    P    +  ++  L +         LF +M+  G   +++  N L+N
Sbjct: 33  AIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILIN 92

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +C LR+++ A ++     K G+ P + +Y+ LI GL    +  E+  ++ ++  + I+ 
Sbjct: 93  SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V YG +I GL + G+   A++LL  +      PD   YN +I G C   L+  A  L 
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E++++   PN  T+T LI G C  G +D A  L N+M      P+V  FN L+DGLCK 
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++ +A +L+   M+ G  P +F              +   +++ Y       KA  +  
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVF--------------TYNALMDGYFLVKEAGKAKNVFN 318

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +A+ G   D+ +Y+ +I+G  K+  ++ A+ LF+ ++ + + PD V Y +LI+GL +  
Sbjct: 319 IMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSG 378

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R   A +   +M   G  P+   Y SL+   C+  +   A +L L+ ++D          
Sbjct: 379 RINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIAL-LKKIKD---------- 427

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                          QG+           +  Y I + GLC+DG++ +A  +F  L+   
Sbjct: 428 ---------------QGI--------QANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKG 464

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAM 690
             V   +   +I+GLCK    D A+
Sbjct: 465 HNVDVVTYSIMINGLCKESLFDEAL 489



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 148/284 (52%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+   NV+     F  L+ G  K G   +A      M +    PDV+ YNA+++  F 
Sbjct: 247 LNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFL 306

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  V+  M ++    ++ ++S++I+GLSK    + A+ + + M    ++P+   
Sbjct: 307 VKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 366

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y+ +I GLC+  R + A +   +M D G  P+ + Y +L++  CK  +VD+A+ALL+  +
Sbjct: 367 YSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIK 426

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G    + +Y+ L+DGL +  R  +A   ++ +  +    DVV Y +MI GL +     
Sbjct: 427 DQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFD 486

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +A+ LLS M ++G VPD   Y  +I  F +  + D+A  L  E+
Sbjct: 487 EALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 23/312 (7%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    L+ GY+ V +  KA   F  M +     DV+ Y+ +++   + ++   A+ ++
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF 352

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
             M   N +P++V +S LI+GL KSG+   A+K +DEM  RG  PN  TYT +I  LC+ 
Sbjct: 353 EGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKS 412

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           ++ D+A  L  K+KD G   +   YN L++G CK  R+ +A  + +     G    + +Y
Sbjct: 413 HQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTY 472

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-- 334
           S +I+GL +   +DEA     KM ++   PD + Y  +I    E      A KLL +M  
Sbjct: 473 SIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532

Query: 335 ----RERGIVPDTY----CYNALIKG-----------FCDLGLLDQARSLQVEIWKRDSL 375
               ++ G   D Y    C  +++             F D     +    +V +WKR ++
Sbjct: 533 CVDYKDNGDTCDQYDEFICKRSILASWNSSYVVGGWEFDDWESPVREIPTRVNLWKRKAI 592

Query: 376 PNTHTFTILICG 387
           P   +   + CG
Sbjct: 593 PPDASRGCVFCG 604



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 14/271 (5%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           ++DA   FN+M +    P +  F  ++  L K         LF +ME+    + ++    
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYI---- 85

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +L  ++  YC    I+ A+ +  ++ + G  PDIITY +LI G C  G + 
Sbjct: 86  ---------TLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVK 136

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +L     L  +G++ D V+YGTLINGL ++ +   A R+  ++    C P   +Y +++
Sbjct: 137 ESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTII 196

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLND 632
              C+ +    AF L+ +        +  +  S I  F   G+++ A   L EM  K  +
Sbjct: 197 DGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVN 256

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
             +  +   + GLC++G+++EA ++ +V+++
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMK 287



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 101/198 (51%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +IS L K    D      + +R+ NV      +  LI G  K G    AL+   +M
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    P+V  Y ++++   +      A+A+  ++       N+ T+++L++GL K G+ 
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A K+  ++  +G   +  TY+I+I+GLC+ +  DEA  L  KM+D GC PD +AY  +
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510

Query: 245 LNGFCKLRRVDEALALLR 262
           +N F +    D+A  LLR
Sbjct: 511 INAFFEKDMNDKAEKLLR 528



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 108/277 (38%), Gaps = 52/277 (18%)

Query: 479 KAYKILMQLAESGNLPDI----ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           K Y I++ L +   L  I    IT N LIN +C +  IN A  +F ++   G +PD +TY
Sbjct: 63  KHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITY 122

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            TLI GL    + +++     ++   G       Y +L+   C+  +   A    L+ LR
Sbjct: 123 TTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA----LRLLR 178

Query: 595 DISG---RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
            I G   R D  M                                 Y   + GLC+D  V
Sbjct: 179 KIEGEICRPDVVM---------------------------------YNTIIDGLCKDKLV 205

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR---PRVC 708
           ++A +++  + E +      +   LI+G C  G LD A     + L N  +L+   P VC
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKA-----FGLLNEMVLKNVNPNVC 260

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +        K+ K   A  L+  M   G   D   Y
Sbjct: 261 TFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 297



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 57/128 (44%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L K +  D     L +++   +      + +L+ G  K G    A + F  +  
Sbjct: 403 TSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLM 462

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                DV  Y+ ++N   ++ LF  AL +  +M    C+P+ + +  +IN   +    + 
Sbjct: 463 KGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDK 522

Query: 187 AIKMLDEM 194
           A K+L EM
Sbjct: 523 AEKLLREM 530


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 175/694 (25%), Positives = 314/694 (45%), Gaps = 29/694 (4%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KRK     A+ + +I++L     F+     + ++     +     +  ++  Y K G  +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    MK      DV  YN +++   R         +  +M K    PN VT++ LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NG S  GK  +A ++L+EM   G+ PN  T+  +I G        EA ++F  M+  G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V+Y  LL+G CK    D A       +++G      +Y+ +IDGL +    DEA   
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M ++ I+PD+V Y  +I G  + G+ K A +++  +   G+ P+   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +G L +A  +   +       +  TF +L+  +C+ G V +A++    M   G  P+   
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F+ LI+G   +GE  KA  +F +M ++G +PT F              +  ++++  C  
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF--------------TYGSLLKGLCKG 591

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K L  L       D + YN+L+   CK GN+  A+ LF E+  + + PDS TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            +LI+GL R  +   A     +    G   P+  +Y   +    +  ++     ++ +  
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG--IYFREQ 709

Query: 594 RDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            D  G   + + +   I+ + + G++E     L EM  +     L  Y I L G  +   
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V  +  ++  ++    +    +C  L+ G+C+   L++ + +        FI R    + 
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL-----KAFICRGVEVDR 824

Query: 711 LLRSLLFSK--DNKKVH-AYHLLCRMKSVGYDLD 741
              ++L SK   N +++ A+ L+  M S+G  LD
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 164/671 (24%), Positives = 283/671 (42%), Gaps = 74/671 (11%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAV---ISMLLKPNGFDLYWQTLDELR--SGNVSVV 97
           + ++  +F  W  K+  L +      V     +L++   +D     L EL   SG  S V
Sbjct: 49  HGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFV 108

Query: 98  --------------SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
                           V+ +LI  Y + G  + +LE F  M  +   P VY  NA+L   
Sbjct: 109 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +    +   +   EM+K    P++ TF++LIN L   G  E +  ++ +M + G  P  
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  V+   C+  R   A  L   MK  G   D   YN L++  C+  R+ +   LLR 
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K    P   +Y+ LI+G     +   A     +M    + P+ V +  +I G    G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            K+A+K+   M  +G+ P    Y  L+ G C     D AR   + + +        T+T 
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKME 440
           +I G+C+NG +D+A  L N+M K G  P +  ++ALI+G CK G  + A  +    Y++ 
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +  N  ++                 T++   C  G + +A +I   +   G+  D  T+N
Sbjct: 469 LSPNGIIY----------------STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            L+   CK G +  A +  + +   G+ P++V++  LING         AF +F +M + 
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENA 619
           G  P+   Y SL+   C+                         ++  E+FL+    V  A
Sbjct: 573 GHHPTFFTYGSLLKGLCK----------------------GGHLREAEKFLKSLHAVPAA 610

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +  ++             Y   L  +C+ G + +A+++F  +V+   +    +   LI G
Sbjct: 611 VDTVM-------------YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657

Query: 680 LCKRGYLDLAM 690
           LC++G   +A+
Sbjct: 658 LCRKGKTVIAI 668



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 190/758 (25%), Positives = 318/758 (41%), Gaps = 102/758 (13%)

Query: 59   RLRSFASNSAVISMLLKPNGFD------LYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            R R    N    + L+  NGF       +  Q L+E+ S  +S     F  LI G+   G
Sbjct: 290  RKRMIHPNEVTYNTLI--NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            + ++AL+ F  M+     P    Y  +L+   +   F LA   Y  M +       +T++
Sbjct: 348  NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR-------------- 218
             +I+GL K+G  + A+ +L+EM++ GI P+  TY+ +I+G C++ R              
Sbjct: 408  GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 219  ---------------------ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                                   EA R++  M   G + D   +N L+   CK  +V EA
Sbjct: 468  GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527

Query: 258  LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
               +R    DG +P   S+ CLI+G   +    +A++ + +M +    P    YG +++G
Sbjct: 528  EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587

Query: 318  LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            L + G +++A K L  +       DT  YN L+   C  G L +A SL  E+ +R  LP+
Sbjct: 588  LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647

Query: 378  THTFTILICGMCRNG-------MVDDAQKLFN---------------------------- 402
            ++T+T LI G+CR G          +A+   N                            
Sbjct: 648  SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 403  -KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNR- 457
             +M+  G  P +   NA+IDG  + G++EK N L  +M     G N T +  L  G ++ 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 458  ------------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                              + DK +  ++V   C + ++    KIL      G   D  T+
Sbjct: 768  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 500  NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            N LI+  C  G IN A  L K +   G+  D  T   +++ L R  R +++  +  +M +
Sbjct: 828  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 560  NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             G +P    Y  L+   CR      AF +  + +       + +  ++   L K    + 
Sbjct: 888  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 620  IQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
               LL    K+     +A +T  +   C++G V EAL +  V+  C   +   S   LI 
Sbjct: 948  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 679  GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            GLC +G + LA +++     +GF+        L+R LL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 35/196 (17%)

Query: 68   AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE------------ 115
            A++S+L + + F      L E+    +S  S  +  LI+G  +VGD +            
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 116  -------------KALESFGKMKE----------FDCQPDVYIYNAVLNIAFRKQLFLLA 152
                         +AL   GK  E              P +  +  ++++  +    + A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 153  LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            L +   M       ++V++++LI GL   G   +A ++ +EM   G L N  TY  +I G
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043

Query: 213  LCQINRADEAYRLFLK 228
            L     A     + LK
Sbjct: 1044 LLARETAFSGADIILK 1059


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 261/525 (49%), Gaps = 25/525 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIV 209
           A +V   M K     N+   +L++ G  +SG+ + A+ +  +M +    ++P+  TY  +
Sbjct: 96  AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155

Query: 210 ISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++G C+  R  EA  LF  MK  G C P+ V Y+ L++ +CK   V E L LL   E++G
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               +  YS LI         +     + +M   K+ P+VV Y  +++GL   G+ ++A 
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREAS 275

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           ++L DM  RG+ PD   Y  L  G C  G    A  +   + ++   P T T+ +++ G+
Sbjct: 276 EMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGL 335

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   +DDA  +   M K G  P    +N L+ GLC AG++ +A      M++ K     
Sbjct: 336 CKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA------MDLWK----- 384

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           L LS+  +   D  +   +++  C  G +H A +I   + E G   +I+TYN LI G+  
Sbjct: 385 LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLA 444

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              +  ALKL+K     G  P+S+TY  +INGL ++     A  +F +M  +G  P+   
Sbjct: 445 ARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVID 504

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y +LMT  CR      A SL+ Q +R+++   D    +  I+  L+ G+V++A + L EM
Sbjct: 505 YNALMTSLCREDSLEQARSLF-QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563

Query: 627 DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            F ++   L P    ++I +    + G + EA+ ++  +V C  +
Sbjct: 564 -FMMD---LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHV 604



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 166/601 (27%), Positives = 278/601 (46%), Gaps = 64/601 (10%)

Query: 14  TVTPIEPALEPLLPFLSKT----TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV 69
           T  P EPA   L+  L K      V SV  K  +  V  RF   +A  +   +    S  
Sbjct: 37  TSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFA 96

Query: 70  ISML--LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE- 126
            S+L  +   GF +    L+               +++ G+ + G C+KA+  F +MK  
Sbjct: 97  FSVLSLMTKRGFGVNVYNLN---------------LVLKGFCRSGQCDKAMSLFSQMKRN 141

Query: 127 FDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL--NCLPNIVTFSLLINGLSKSGK 183
           +DC  PD   YN ++N  F K   L    V +E +K   +C PN+VT+S+LI+   KSG+
Sbjct: 142 YDCVVPDCVTYNTLVN-GFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGE 200

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
               + +L+EM + G+  + F Y+ +IS  C     +    LF +M     SP+ V Y+ 
Sbjct: 201 VGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSC 260

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ G  +  R  EA  +L+     G  P + +Y+ L DGL +  R  +A      M ++ 
Sbjct: 261 LMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG 320

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            EP  + Y V++ GL +  ++ DA  ++  M ++G  PD   YN L+KG C  G + +A 
Sbjct: 321 EEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA- 379

Query: 364 SLQVEIWKR------DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
              +++WK          P+  T   LI G+C+ G V DA ++ + M + G   ++  +N
Sbjct: 380 ---MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYN 436

Query: 418 ALIDGLCKAGEL-EKANLLFYKMEIGKNPT----------------------LFLRLSQG 454
            LI+G   A +L E   L  Y +E G +P                       LF ++   
Sbjct: 437 FLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDS 496

Query: 455 GNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           G R  V D  +L T     C    + +A  +  ++    +  D++++N +I+G  K G++
Sbjct: 497 GIRPTVIDYNALMT---SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDV 553

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +L  E+ +  L PD+VT+  LIN   ++   ++A  ++ +M   G  P   V+ SL
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSL 613

Query: 573 M 573
           +
Sbjct: 614 L 614



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 223/462 (48%), Gaps = 15/462 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LIS +   GD E   E F +M      P+V  Y+ ++    R   +  A  +  +M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P++V +++L +GL K+G+   AIK+LD M Q+G  P   TY +V++GLC+ +R 
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRM 341

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC- 278
           D+A+ +   M   G  PD V YN LL G C   ++ EA+ L +    + F  +   ++C 
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 279 -LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI GL +  R  +A   +  M E  ++ ++V Y  +I G   A K+ +A+KL     E 
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P++  Y+ +I G C + +L  AR L  ++      P    +  L+  +CR   ++ A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
           + LF +M        V  FN +IDG  KAG+++ A  L  +M        F+      + 
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM--------FMM-----DL 568

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           V D  +   ++ ++   G++ +A  +  ++   G++P ++ ++SL+ G+   G     + 
Sbjct: 569 VPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIIS 628

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           L  ++  K +  DS    T++  L  + R  D  +I  +  Q
Sbjct: 629 LLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ 670



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 180/385 (46%), Gaps = 6/385 (1%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS--VVSDV--FFVLISGYYKVGDCEK 116
           R  + N    S L++  G    W+   E+     +  V  DV  + VL  G  K G    
Sbjct: 249 RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGD 308

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++    M +   +P    YN V+N   ++     A  V   MVK    P+ VT++ L+ 
Sbjct: 309 AIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLK 368

Query: 177 GLSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           GL  +GK   A+ +   +      + P+ FT   +I GLC+  R  +A R+   M + G 
Sbjct: 369 GLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL 428

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             + V YN L+ G+   R++ EAL L +   + GF P   +YS +I+GL + +    A  
Sbjct: 429 QGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARG 488

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM +  I P V+ Y  ++  L     ++ A  L  +MR      D   +N +I G  
Sbjct: 489 LFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL 548

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +  A+ L  E++  D +P+  TF+ILI    + GM+D+A  L+ KM   G  P V 
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608

Query: 415 MFNALIDGLCKAGELEKANLLFYKM 439
           +F++L+ G    GE EK   L ++M
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQM 633



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 4/318 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            +  L+ G    G   +A++ +  +  ++F  +PDV+  N ++    ++     A  ++ 
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            MV++    NIVT++ LI G   + K   A+K+     + G  PN  TY+++I+GLC++ 
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
               A  LF KMKDSG  P  + YNAL+   C+   +++A +L +          + S++
Sbjct: 482 MLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFN 541

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +IDG  +A     A     +MF   + PD V + ++I   S+ G + +AM L   M   
Sbjct: 542 IIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC 601

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH-TFTILICGMCRNGMVDD 396
           G VP    +++L+KG+   G  ++  SL  ++  +D + ++  T TIL C +C      D
Sbjct: 602 GHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILAC-LCHMSRNLD 660

Query: 397 AQKLFNKMEKAGCFPSVG 414
            +K+  K  +     S G
Sbjct: 661 VEKILPKFSQQSEHTSKG 678



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 2/153 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+++ L + +  +       E+R+ N +V    F ++I G  K GD + A E   +M  
Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D  PD   ++ ++N   +  +   A+ +Y +MV    +P +V F  L+ G    G+TE 
Sbjct: 566 MDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625

Query: 187 AIKMLDEMTQRG-ILPNKFTYTIVISGLCQINR 218
            I +L +M  +  +L +K T TI ++ LC ++R
Sbjct: 626 IISLLHQMADKDVVLDSKLTSTI-LACLCHMSR 657


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 254/550 (46%), Gaps = 53/550 (9%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK-------PNGFDLYWQTLDELRSGNVS 95
           N   G   F   +KR ++        ++ ++ K       PN   L        RSG   
Sbjct: 228 NSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTD 287

Query: 96  VVSDVFFVL--ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
              DV   L  + G  +   C   L + G+ +EF                 ++   LLA 
Sbjct: 288 RAWDVLHGLMKLGGVMEAASCNALLTALGRAREF-----------------KRMNTLLA- 329

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT---QRGIL--PNKFTYTI 208
               EM +++  PN+VTF +LIN L K  + + A+++ ++M      G L  P+  TY  
Sbjct: 330 ----EMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNT 385

Query: 209 VISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           +I GLC++ R +E   L  +M+    C P+ V YN L++G+CK   ++ A  L     KD
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKD 445

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + + + L+DG+ +  R + A  ++ +M  + ++ + V Y  +IR       ++ A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           M+L  +M E G  PD   Y  LI G    G LD+A  +  ++ +    P+  +F +LI G
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
            CR   +D+A ++  +ME AG  P    +N LI    K G+   A+ L  KM + G  PT
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPT 625

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLING 505
           +               +   ++  YC  G + +A KI   ++ +  +P + + YN LIN 
Sbjct: 626 V--------------VTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+   ++ AL L  ++++KG++P++ T+  +  GLQ  +    AF +  +M ++ C P 
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731

Query: 566 PAVYKSLMTW 575
               + L  W
Sbjct: 732 YITMEILTEW 741



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 239/493 (48%), Gaps = 37/493 (7%)

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSGKT------ 184
            +I N ++++ FRK     AL +  EM+  K    PN  T  ++ + LSK  K       
Sbjct: 192 THIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDE 251

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E  + ++ +  +  + PN    T +IS LC+  R D A+ +   +   G   +  + NAL
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK- 303
           L    + R       LL   ++    P + ++  LI+ L + +R DEA   + KM   + 
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGES 371

Query: 304 ----IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGL 358
               +EPDV+ Y  +I GL + G+ ++ + L+  MR +   +P+T  YN LI G+C   +
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ AR L  ++ K    PN  T   L+ GMC++G ++ A + FN+M+  G   +   + A
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGG--NRVH---------- 459
           LI   C    +EKA  LF +M E G +P      TL   LSQ G  +R            
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 460 ---DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D  S   ++  +C    + +AY++L ++  +G  PD +TYN+LI+ F K G+ + A 
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTW 575
           +L K++  +GL P  VTYG LI+        ++A +IF  M       P+  +Y  L+  
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671

Query: 576 SCRRRKFSLAFSL 588
            CR+ +  LA SL
Sbjct: 672 LCRKNQVDLALSL 684



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 196/377 (51%), Gaps = 5/377 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  LI G  KVG  E+ L    +M+ +  C P+   YN +++   +  +   A  ++ +
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M K    PN+VT + L++G+ K G+   A++  +EM  +G+  N  TYT +I   C +N 
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++A  LF +M ++GCSPD + Y  L++G  +  ++D A  +L   ++ GF P + S++ 
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  R  + DEAY   ++M    I+PD V Y  +I   S+ G    A +L+  M + G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDA 397
           +VP    Y ALI  +C  G LD+A  +  ++     + PNT  + ILI  +CR   VD A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR--LSQG 454
             L + M+  G  P+   FNA+  GL +   L KA  L  +M E   NP       L++ 
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEW 741

Query: 455 GNRVHDKASLQTMVEQY 471
            + V + A L++ V+ Y
Sbjct: 742 LSAVGETAKLKSFVQGY 758



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 216/467 (46%), Gaps = 28/467 (5%)

Query: 242 NALLNGFCKLRRVDEALALLRSF--EKDGFVPRLGS----YSCLI--DGLFRAKRYDEAY 293
           N L++   +  RVD+AL LL      K  F P   +    +S L   D + RA   +E  
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               K  E ++ P+ +    +I  L  +G+   A  +L  + + G V +    NAL+   
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM---EKAGCF 410
                  +  +L  E+ + D  PN  TF ILI  +C+   VD+A ++F KM   E  G  
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375

Query: 411 --PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  +N LIDGLCK G  E+         +G    L  R+      + +  +   ++
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEG--------LG----LVERMRSQPRCMPNTVTYNCLI 423

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + YC A +I  A ++  Q+ + G  P+++T N+L++G CK G INGA++ F E+Q KGL+
Sbjct: 424 DGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLK 483

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            ++VTY  LI     V+  E A  +F +M + GC+P   VY +L++   +  K   A S 
Sbjct: 484 GNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRA-SF 542

Query: 589 WLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            L  +++     D    +  I  F +K +++ A + L EM+          Y   +    
Sbjct: 543 VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFS 602

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           + G    A  +   +V+   + T  +   LIH  C  G LD AM +F
Sbjct: 603 KTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIF 649



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 1/259 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I      N  +   +  DE+     S  + V++ LISG  + G  ++A     KMKE
Sbjct: 490 TALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKE 549

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD+  +N ++N   RK     A  +  EM      P+ VT++ LI+  SK+G    
Sbjct: 550 AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFST 609

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALL 245
           A +++ +M + G++P   TY  +I   C     DEA ++F  M   S   P+ V YN L+
Sbjct: 610 AHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILI 669

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           N  C+  +VD AL+L+   +  G  P   +++ +  GL       +A+    +M E    
Sbjct: 670 NSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACN 729

Query: 306 PDVVLYGVMIRGLSEAGKV 324
           PD +   ++   LS  G+ 
Sbjct: 730 PDYITMEILTEWLSAVGET 748


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 193/777 (24%), Positives = 350/777 (45%), Gaps = 73/777 (9%)

Query: 25  LLPFLSKTTVTSVIMKT---KNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFD 80
           LLP LS +    +        NP     FF +A+   + R +  S   +I +L++     
Sbjct: 67  LLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIP 126

Query: 81  LYWQTLDELRSGNVSVV---SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                L  L  GN+ V+   S+ F + I+    +      +  F   + FD    VY   
Sbjct: 127 PARLLLIRLIDGNLPVLNLDSEKFHIEIAN--ALFGLTSVVGRFEWTQAFDLLIHVY--- 181

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
              +  FR   F  A+ V+Y + +    P++ T + L++ L K+ + E   ++   M++ 
Sbjct: 182 ---STQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE- 237

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G  P+ F++T VI+ LC+  + + A  LF+KM+  G SP+ V YN ++NG C+  R+D A
Sbjct: 238 GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNA 297

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L       G  P L +Y  LI+GL +   +D+      +M      P+VV++  +I G
Sbjct: 298 FELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDG 357

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI-------- 369
             + G ++ A+K+   M  + I P +    +L++GFC    ++ A +   EI        
Sbjct: 358 YCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 417

Query: 370 ---------W------------------KRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
                    W                   R+  P+    T+L+CG+C++G   +A +L+ 
Sbjct: 418 PDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWF 477

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           ++ + G   S    NALI GLC AG+L +A+ +  +M           L +G     D+ 
Sbjct: 478 RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM-----------LERG--LPMDRI 524

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++  +C  G +   +++  ++ + G  PDI TYN L+ G C VG ++ A+KL+ E 
Sbjct: 525 TYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF 584

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +  GL  +  TYG ++ G  + +R ED   +F ++       +  VY  ++   C+    
Sbjct: 585 KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNV 644

Query: 583 SLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
           + A  L L+ ++      + +  S  I      G VE+A   + EM  +     +  YT 
Sbjct: 645 AAALQL-LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C+ GQ+  A + +  ++         +   +I G CK G ++ A ++ +   ++G
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWN 757
            +  P V  Y + +  F K N   +A+ +  +M + G  +D   Y    +L+ G WN
Sbjct: 764 IV--PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY---TTLVHG-WN 814


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 175/694 (25%), Positives = 314/694 (45%), Gaps = 29/694 (4%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KRK     A+ + +I++L     F+     + ++     +     +  ++  Y K G  +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    MK      DV  YN +++   R         +  +M K    PN VT++ LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NG S  GK  +A ++L+EM   G+ PN  T+  +I G        EA ++F  M+  G +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V+Y  LL+G CK    D A       +++G      +Y+ +IDGL +    DEA   
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M ++ I+PD+V Y  +I G  + G+ K A +++  +   G+ P+   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +G L +A  +   +       +  TF +L+  +C+ G V +A++    M   G  P+   
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F+ LI+G   +GE  KA  +F +M ++G +PT F              +  ++++  C  
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF--------------TYGSLLKGLCKG 591

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K L  L       D + YN+L+   CK GN+  A+ LF E+  + + PDS TY
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            +LI+GL R  +   A     +    G   P+  +Y   +    +  ++     ++ +  
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG--IYFREQ 709

Query: 594 RDISGRDDESMKS---IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            D  G   + + +   I+ + + G++E     L EM  +     L  Y I L G  +   
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V  +  ++  ++    +    +C  L+ G+C+   L++ + +        FI R    + 
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL-----KAFICRGVEVDR 824

Query: 711 LLRSLLFSK--DNKKVH-AYHLLCRMKSVGYDLD 741
              ++L SK   N +++ A+ L+  M S+G  LD
Sbjct: 825 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 164/669 (24%), Positives = 282/669 (42%), Gaps = 74/669 (11%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAV---ISMLLKPNGFDLYWQTLDELR--SGNVSVV-- 97
           ++  +F  W  K+  L +      V     +L++   +D     L EL   SG  S V  
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFG 110

Query: 98  ------------SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
                         V+ +LI  Y + G  + +LE F  M  +   P VY  NA+L    +
Sbjct: 111 ALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK 170

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               +   +   EM+K    P++ TF++LIN L   G  E +  ++ +M + G  P   T
Sbjct: 171 SGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVT 230

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  V+   C+  R   A  L   MK  G   D   YN L++  C+  R+ +   LLR   
Sbjct: 231 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K    P   +Y+ LI+G     +   A     +M    + P+ V +  +I G    G  K
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+K+   M  +G+ P    Y  L+ G C     D AR   + + +        T+T +I
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIG 442
            G+C+NG +D+A  L N+M K G  P +  ++ALI+G CK G  + A  +    Y++ + 
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            N  ++                 T++   C  G + +A +I   +   G+  D  T+N L
Sbjct: 471 PNGIIY----------------STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           +   CK G +  A +  + +   G+ P++V++  LING         AF +F +M + G 
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQ 621
            P+   Y SL+   C+                         ++  E+FL+    V  A+ 
Sbjct: 575 HPTFFTYGSLLKGLCK----------------------GGHLREAEKFLKSLHAVPAAVD 612

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
            ++             Y   L  +C+ G + +A+++F  +V+   +    +   LI GLC
Sbjct: 613 TVM-------------YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 659

Query: 682 KRGYLDLAM 690
           ++G   +A+
Sbjct: 660 RKGKTVIAI 668



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 190/758 (25%), Positives = 318/758 (41%), Gaps = 102/758 (13%)

Query: 59   RLRSFASNSAVISMLLKPNGFD------LYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            R R    N    + L+  NGF       +  Q L+E+ S  +S     F  LI G+   G
Sbjct: 290  RKRMIHPNEVTYNTLI--NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 347

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            + ++AL+ F  M+     P    Y  +L+   +   F LA   Y  M +       +T++
Sbjct: 348  NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR-------------- 218
             +I+GL K+G  + A+ +L+EM++ GI P+  TY+ +I+G C++ R              
Sbjct: 408  GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 467

Query: 219  ---------------------ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                                   EA R++  M   G + D   +N L+   CK  +V EA
Sbjct: 468  GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 527

Query: 258  LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
               +R    DG +P   S+ CLI+G   +    +A++ + +M +    P    YG +++G
Sbjct: 528  EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587

Query: 318  LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            L + G +++A K L  +       DT  YN L+   C  G L +A SL  E+ +R  LP+
Sbjct: 588  LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647

Query: 378  THTFTILICGMCRNG-------MVDDAQKLFN---------------------------- 402
            ++T+T LI G+CR G          +A+   N                            
Sbjct: 648  SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 707

Query: 403  -KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNR- 457
             +M+  G  P +   NA+IDG  + G++EK N L  +M     G N T +  L  G ++ 
Sbjct: 708  EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767

Query: 458  ------------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                              + DK +  ++V   C + ++    KIL      G   D  T+
Sbjct: 768  KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827

Query: 500  NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            N LI+  C  G IN A  L K +   G+  D  T   +++ L R  R +++  +  +M +
Sbjct: 828  NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887

Query: 560  NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             G +P    Y  L+   CR      AF +  + +       + +  ++   L K    + 
Sbjct: 888  QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 620  IQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
               LL    K+     +A +T  +   C++G V EAL +  V+  C   +   S   LI 
Sbjct: 948  ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 679  GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            GLC +G + LA +++     +GF+        L+R LL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 35/196 (17%)

Query: 68   AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE------------ 115
            A++S+L + + F      L E+    +S  S  +  LI+G  +VGD +            
Sbjct: 864  AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923

Query: 116  -------------KALESFGKMKE----------FDCQPDVYIYNAVLNIAFRKQLFLLA 152
                         +AL   GK  E              P +  +  ++++  +    + A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983

Query: 153  LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            L +   M       ++V++++LI GL   G   +A ++ +EM   G L N  TY  +I G
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043

Query: 213  LCQINRADEAYRLFLK 228
            L     A     + LK
Sbjct: 1044 LLARETAFSGADIILK 1059


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 164/593 (27%), Positives = 277/593 (46%), Gaps = 28/593 (4%)

Query: 8   VLTILDTVTPIEPA-LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL-RSFAS 65
           +L  L++ T  EP  LE L   L    V  V+    + +   RF+ WA  R     S  +
Sbjct: 63  ILRALESSTCSEPVELERLDIELDPFVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFA 122

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
            + ++S+L     F L  + L  +RS  V++   ++ +L+SGY + G  +  + +F +M 
Sbjct: 123 IAYIVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMV 182

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGLSKSGK 183
              C+     YN  + +  +   F L +  YY M   K  CL    T+S  I+ L +S +
Sbjct: 183 MSGCREFGIDYNRYIGVLIKNCCFDL-VEKYYGMALSKGLCLTPF-TYSRWISALCQSNR 240

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E+  ++L +M + G  P+ +   I I  LC+ NR  +A ++  KM+  G  PD V Y  
Sbjct: 241 IELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTT 300

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           ++   C  +R  EA+ L     K G  P + +   LI GL +  + +EA+    +M    
Sbjct: 301 VVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLN 360

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           IE  V +Y  +I G   AG +  A  ++S MR  G  P    YN L+  +C +G++++A 
Sbjct: 361 IELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAE 420

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +L  ++      P+ +++  L+ G+C+   +D A    +   + G F  +   N LID  
Sbjct: 421 NLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 480

Query: 424 CKAGELEKANLLFYKMEI---------------GKNPTLFLRLSQGGNRVHDKASL---- 464
           CK  +++ A  LF +M+                G     +  L++       KA +    
Sbjct: 481 CKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNV 540

Query: 465 ---QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                M+   C  G + +A KI + + +   LPDI+TYN+LI    K      AL LFK+
Sbjct: 541 NLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKD 600

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           ++ KG+ PDS+T+  LINGL    R   A+ ++  M +NG      V + L++
Sbjct: 601 MRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLIS 653



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 163/426 (38%), Gaps = 24/426 (5%)

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDM-----RERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           LY +++ G   AGK    +    +M     RE GI  + Y    LIK  C   L+++   
Sbjct: 157 LYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYI-GVLIKNCC-FDLVEKYYG 214

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           + +    +       T++  I  +C++  ++  ++L   M++ G  P +   N  ID LC
Sbjct: 215 MAL---SKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLC 271

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K   L  A  +  KM             +G   + D  +  T+V   C      +A  + 
Sbjct: 272 KQNRLHDALQMVEKM-------------RGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLW 318

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G  PD++   +LI G CK   +  A +L   +    +      Y  LI+G  R 
Sbjct: 319 EEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRA 378

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              + A+ I   M  NGC P    Y  L+   C       A +L  +        D  S 
Sbjct: 379 GSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSY 438

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
             + + L K    +     +    ++  F  +    I +   C+  +VK AL +F  +  
Sbjct: 439 NQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDY 498

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
                   +   LI+GL   GY +LA ++F   LK        + N +L  L    D K+
Sbjct: 499 KGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKR 558

Query: 724 VHAYHL 729
                L
Sbjct: 559 AQKIFL 564



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 74/146 (50%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
            +I+ L     ++L  +  +++    +    +++ +++    KVGD ++A + F  M + 
Sbjct: 510 TLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQK 569

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           +  PD+  YN ++    +    + AL ++ +M      P+ +TF  LINGL   G++ +A
Sbjct: 570 EILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLA 629

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGL 213
            ++ + M + GI+ ++     +IS L
Sbjct: 630 YEVWEYMMENGIILDREVSERLISVL 655



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 3/240 (1%)

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  L++G+ + G  +  +  F E+ + G R   + Y   I  L +    +   + +G   
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMAL 217

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVE 617
             G   +P  Y   ++  C+  +  L   L     R     D  +    I+   ++  + 
Sbjct: 218 SKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLH 277

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           +A+Q + +M  K     +  YT  +  LC + +  EA+ ++  +V+        +C  LI
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALI 337

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            GLCK   ++ A ++    L     L   + N L+    F +      AY ++  M++ G
Sbjct: 338 FGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISG--FWRAGSIDKAYTIISFMRTNG 395


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 190/717 (26%), Positives = 316/717 (44%), Gaps = 70/717 (9%)

Query: 28  FLSKT----TVTSVIMKT-KNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDL 81
           F+S+T     V  V+++T  + ++  RFF +    K    S  S   +I  L++ N   L
Sbjct: 52  FISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSN---L 108

Query: 82  YWQTLDELRSGNVSVVS--DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           YW     L++  +  ++   +F   +  Y K         +F     FD     Y+ N  
Sbjct: 109 YWPASSLLQTLLLRGLNPEGLFESFLDSYRKC--------NFSTTLGFDLLIQTYVQN-- 158

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
                R++L    L V   M+    LP I T S ++NGL +  +  +A+ + DE+   G+
Sbjct: 159 -----RRELD--GLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGL 211

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            P+ + YT V+  LC++     A  +  +M+ SGC      YN  + G CK +RV EA+ 
Sbjct: 212 RPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVE 271

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +       G    +G+Y  L+ GL + + ++       +M E    P       ++ GL 
Sbjct: 272 IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLR 331

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G +  A  L++ +++ G+ P  + YNALI   C  G LD+A SL   +  +   PN  
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T++ILI   C+ G +D A     KM + G   +V  +++LI G CK G+L  A  LF +M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 440 ---EIGKNPTLFLRLSQG---GNRVHDKASL----------------QTMVEQYCTAGLI 477
               +  N  ++  L  G      +H+   L                  ++   C A  +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A K+  ++ E   +P+ +TYN LI G CK GN   A +L  E+  KGL PD+ TY  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 538 INGLQRVDREEDAFRIFGQMPQ--------NGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           I+GL    R  +A      +           GC P+   Y +L+   C+      A  L 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631

Query: 590 LQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLC 646
            + L   S  +  +     ++L  +G +E AIQ     D  L  F      Y I + G C
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ---LHDVLLEGFLANTVTYNILIRGFC 688

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNG 700
           + G+++EA  +   +++       P C+    +I+  C+RG L  A+ ++   L  G
Sbjct: 689 KLGRIQEAAEVLVNMIDSG---ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 223/480 (46%), Gaps = 64/480 (13%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G  K G+   A +   K+K+F   P +++YNA++N   +      A +++  M    
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKG 385

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN VT+S+LI+   K GK +VA+  L +MT+ GI    + Y+ +ISG C++ +   A 
Sbjct: 386 LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAK 445

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF +M  +G  P+ V Y +L++G+CK   +  A  L       G  P   +++ LI GL
Sbjct: 446 SLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             A R  EA   + +M E  + P+ V Y V+I G  + G    A +LL +M E+G+VPDT
Sbjct: 506 CHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDT 565

Query: 344 YCYNALIKGFCDLGLLDQARS----LQVEIWKRDS----LPNTHTFTILICGMCRNGMVD 395
           Y Y  LI G C  G + +AR     LQ E  K +     LPN  T+T LI G+C+ G++D
Sbjct: 566 YTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMD 625

Query: 396 DAQKLFNKM-------------------------EKA---------GCFPSVGMFNALID 421
            A+ L  +M                         EKA         G   +   +N LI 
Sbjct: 626 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIR 685

Query: 422 GLCKAGEL-EKANLLFYKMEIGKNP------TLFLRLSQGGNRVH--------------- 459
           G CK G + E A +L   ++ G +P      T+     + G+                  
Sbjct: 686 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++   C  G + KA+++   +   G  P+  TYNSLI+G C + +++     F
Sbjct: 746 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 161/359 (44%), Gaps = 42/359 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ +  +     ++  LISGY K G+   A   + +M      P+ Y + A+++    
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A  ++ EMV+ N +PN VT+++LI G  K G T  A ++LDEM ++G++P+ +T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDS--------GCSPDFVAYNALLNGFCKLRRVDEA 257
           Y  +ISGLC   R  EA      ++          GC P+ V Y AL+NG CK+  +D+A
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKA 627

Query: 258 LALLRSFEKDGFVPRLGSYSCLID----------------------------------GL 283
             L R       +P   +Y+C +D                                  G 
Sbjct: 628 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGF 687

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R  EA      M +  I PD + Y  +I      G +K+A+KL   M  RG+ PDT
Sbjct: 688 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 747

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             YN LI G C  G L +A  L+ ++ +R   PN  T+  LI G C    V      F+
Sbjct: 748 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 179/690 (25%), Positives = 315/690 (45%), Gaps = 60/690 (8%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S  S  + +L+    +    E AL  FG++     + ++ I N +L      +    AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIVI 210
            +  +   +L C+P++ ++S+L+  L   GK+  A  +L  M + G +  PN   Y  VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    ++A  LF +M   G  PD V YN++++  CK R +D+A A LR       +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+ LI G     ++ EA   +++M    I PDVV   +++  L + GK+K+A  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              M  +G  PD + YN ++ G+   G L     L   +      P+ +TF +LI     
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            GM+D A  +FN+M   G  P V  +  +I  LC+ G+++ A   F +M           
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM----------- 455

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           + QG     DK +   +++ +CT G + KA +++ ++  +G   DI+ ++S+IN  CK+G
Sbjct: 456 IDQG--VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 513

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A  +F      GL PD+V Y  L++G   V + E A R+F  M   G  P+  VY 
Sbjct: 514 RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYC 573

Query: 571 SLMTWSCRRRKFSLAFSLWLQYL-RDI----------------SGRDDESMKSIEEFLQK 613
           +L+   C+  +     SL+ + L R I                +GR   +     E  + 
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTES 633

Query: 614 GEVEN------AIQGLLE----------------MDFKLNDFQLAPYTIWLIGLCQDGQV 651
           G   +       ++GL +                M+ K+N   L      + G+ Q  +V
Sbjct: 634 GIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL---NTMIDGMFQTRRV 690

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           +EA ++F+ +   + + +  +   +I  L K G ++ A D+F      G     R+ N++
Sbjct: 691 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 750

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           +R LL  K N+ V A   L ++    + L+
Sbjct: 751 VRELL--KKNEIVRAGAYLSKIDERNFSLE 778



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 255/560 (45%), Gaps = 33/560 (5%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   + +  N LL GFC+ +R DE
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      P+VV Y  
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   YN+++   C    +D+A +   ++  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LPN  T+  LI G    G   +A ++F +M +    P V   + L+  LCK G++++A 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 345 DVFDTMAMKGQNPDVF--------------SYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD  T+N LI  +   G ++ A+ +F E++  G++PD VTY T+I  L R+ + +DA  
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           K G V +A Q + ++   +    L P    Y++ + G C  G++++AL +F  +V   A 
Sbjct: 511 KLGRVMDA-QNIFDLTVNVG---LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AG 564

Query: 668 VTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
           + P   V   L++G CK G +D  + +F   L+ G  ++P    Y +      +  + V 
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG--IKPSTILYSIIIDGLFQAGRTVP 622

Query: 726 AYHLLCRMKSVGYDLDACLY 745
           A      M   G  +D C Y
Sbjct: 623 AKVKFHEMTESGIAMDICTY 642



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 182/355 (51%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   V      +  +I+   ++G  + A+E F +M +    PD Y YN ++     
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               L A  +  E++      +IV FS +IN L K G+   A  + D     G+ P+   
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 536

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y++++ G C + + ++A R+F  M  +G  P+ V Y  L+NG+CK+ R+DE L+L R   
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 596

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P    YS +IDGLF+A R   A   + +M E  I  D+  Y +++RGL +     
Sbjct: 597 QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 656

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L  ++R   +  +    N +I G      +++A+ L   I +   +P+  T++I+I
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 716

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + + G+V++A+ +F+ M+ AGC P+  + N ++  L K  E+ +A     K++
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKID 771



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D + S  +     V+  L++GY K+G  ++ L  F +M +   +P   +Y       
Sbjct: 555 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY------- 607

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                                       S++I+GL ++G+T  A     EMT+ GI  + 
Sbjct: 608 ----------------------------SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDI 639

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY IV+ GL +    DEA  LF +++      + +  N +++G  + RRV+EA  L  S
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 699

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   VP + +YS +I  L +    +EA   +  M     EP+  L   ++R L +  +
Sbjct: 700 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759

Query: 324 VKDAMKLLSDMRER 337
           +  A   LS + ER
Sbjct: 760 IVRAGAYLSKIDER 773


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 225/476 (47%), Gaps = 13/476 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF  LI     +   ++A E F  MKE    P +   N++L++  +      A  +Y 
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM +L    ++ TF+++IN L K GK + A   +  M   G+ PN  TY  ++ G C   
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R + A  +   MK     PD   Y +L++G CK  R++EA  +     + G  P    Y+
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG       D A A+  +M ++ I P +  Y  +I  L    +  +A  ++ +++E+
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI PD   YN LI G+C      +A  L  E+      P   T+T L+  + +   + +A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF K+   G  P V MFNALIDG C    ++ A  L   M+  K P            
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP----------- 499

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +  T+++ +C  G + +A ++  ++   G  PD I++N+LI+G+ + G+I  A +
Sbjct: 500 --DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  E+   G  P  +TY  L+ GL +    + A  +  +M   G TP    Y +L+
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 226/467 (48%), Gaps = 22/467 (4%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + F  LI       + + A +    M ++G+LP   T   ++S   ++NR + A+ L+ +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M           +N ++N  CK  ++ +A   +   E  G  P + +Y+ ++ G   + R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A A    M  +KIEPD   YG +I G+ + G++++A K+  +M ++G+ P    YN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI GFC+ G LD A + + E+ K+   P   T+  LI  +      D+A+ +  ++++ G
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGKNPTLFLRLSQGGNRVHDKA 462
             P    +N LI+G C+    +KA LL  +M         K  T  L +    NR+ +  
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 463 SL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            L                  +++ +C+   +  A+++L  +      PD +T+N+++ G 
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G +  A +LF E++ +G++PD +++ TLI+G  R    +DAFR+  +M   G  P+ 
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
             Y +L+   C+ ++  LA  L  + +      DD +  ++ E + K
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 225/467 (48%), Gaps = 20/467 (4%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + ++ L+   C + R DEA     + ++ G +P + + + L+    +  R + A+  Y +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           MF  +I+  V  + +MI  L + GK+K A   +  M   G+ P+   YN ++ G+C  G 
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ A ++   + ++   P++ T+  LI GMC+ G +++A K+F +M + G  PS  ++N 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 419 LIDGLCKAGELEKANLLFYKMEI---GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           LIDG C  G L+ A+   YK E+   G +PT    +S   + +H     Q   E  C   
Sbjct: 332 LIDGFCNKGNLDMASA--YKDEMLKKGISPT----MSTYNSLIHALFMEQRTDEAEC--- 382

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
                  ++ ++ E G  PD ITYN LING+C+  N   A  L  E+   G++P   TY 
Sbjct: 383 -------MIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYT 435

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +L++ L + +R ++A  +F ++   G  P   ++ +L+   C       AF L     R 
Sbjct: 436 SLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRM 495

Query: 596 ISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               D+ +  +I +   ++G+VE A +   EM  +        +   + G  + G +K+A
Sbjct: 496 KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDA 555

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             + + +++     T  +   L+ GLCK    DLA ++    +  G 
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 219/465 (47%), Gaps = 15/465 (3%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F  F    ++  L +  + ++++S+ LK N  +  W    E+    +      F ++I+
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
              K G  +KA +  G M+    +P++  YN +++          A A+   M +    P
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +  T+  LI+G+ K G+ E A K+ +EM Q+G+ P+   Y  +I G C     D A    
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M   G SP    YN+L++     +R DEA  +++  ++ G  P   +Y+ LI+G  R 
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
               +A+  + +M    I+P    Y  ++  LS+  ++K+A  L   +   G++PD   +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NALI G C    +  A  L  ++ +    P+  TF  ++ G CR G V++A++LF++M++
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P    FN LI G  + G+++ A  +  +M + G NPT+               +  
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL--------------TYN 575

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
            +V+  C       A ++L ++   G  PD  TY +LI G  KV 
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 3/343 (0%)

Query: 56  KRKRLR--SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           KR+++   SF   S +IS + K    +   +  +E+    +   + ++  LI G+   G+
Sbjct: 283 KRQKIEPDSFTYGS-LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            + A     +M +    P +  YN++++  F +Q    A  +  E+ +    P+ +T+++
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LING  +    + A  + DEM   GI P K TYT ++  L + NR  EA  LF K+   G
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD + +NAL++G C    V  A  LL+  ++    P   +++ ++ G  R  + +EA 
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M    I+PD + +  +I G S  G +KDA ++ ++M + G  P    YNAL++G 
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGL 581

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           C     D A  L  E+  +   P+  T+  LI G+ +  + D+
Sbjct: 582 CKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 165/387 (42%), Gaps = 49/387 (12%)

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G      +++  + L+  R+R     +  ++ LIK  CD+   D+A      + ++  LP
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLP 184

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T   L+    +    + A  L+ +M +     SV  FN +I+ LCK G+L+KA    
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 437 YKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             ME  G  P +               +  T+V  YC++G +  A  IL  +      PD
Sbjct: 245 GHMETSGVKPNI--------------VTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPD 290

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TY SLI+G CK G +  A K+F+E+  KGLRP +V Y TLI+G       + A     
Sbjct: 291 SFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M + G +P+ + Y SL+             +L+++       R DE+   I+E  +KG 
Sbjct: 351 EMLKKGISPTMSTYNSLI------------HALFMEQ------RTDEAECMIKEIQEKGI 392

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             +AI                 Y I + G C+    K+A  +   ++      T  +   
Sbjct: 393 SPDAIT----------------YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           L+H L K+  +  A D+F      G +
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVL 463



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 124/304 (40%), Gaps = 44/304 (14%)

Query: 447 LFLRLSQGGNRVHDKASL--QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           +F  L+   +R+  K+S+    +++  C      +A++    + E G LP I T NSL++
Sbjct: 135 IFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLS 194

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            F K+     A  L+ E+    ++    T+  +IN L +  + + A    G M  +G  P
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP 254

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           +   Y +++   C   +   A ++     R                 QK E ++   G L
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKR-----------------QKIEPDSFTYGSL 297

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLC 681
                            + G+C+ G+++EA  IF  +V+ K +   PS V    LI G C
Sbjct: 298 -----------------ISGMCKQGRLEEASKIFEEMVQ-KGLR--PSAVIYNTLIDGFC 337

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            +G LD+A       LK G        N L+ +L    + +   A  ++  ++  G   D
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM--EQRTDEAECMIKEIQEKGISPD 395

Query: 742 ACLY 745
           A  Y
Sbjct: 396 AITY 399


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 258/539 (47%), Gaps = 30/539 (5%)

Query: 17  PIEPALEPLLPFLSKTTVTSVIM-KTKNPQVGF------RFFIWA-AKRKRLRSFASNSA 68
           P  P   P L   S +  TS++  +  NP  G+      +  + A A+   L+S+     
Sbjct: 20  PHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPAHLQSYDFRET 79

Query: 69  VISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFG 122
            +  LL    K   F+     L+ L   N     DV     LI G++   + EKA     
Sbjct: 80  HLMKLLNRSCKAGKFNESLYFLECLV--NKGYTPDVILCTKLIKGFFNFKNIEKASRVM- 136

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           ++ E   +PDV+ YNAV++   +      A  V   M     LP+IVT++++I  L    
Sbjct: 137 EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K  +A+ +LD++     +P   TYTI+I         +EA +L  +M   G  PD   YN
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           A++ G CK   V+ A  L+ S    G  P + SY+ L+       ++DE      +MF  
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             EP+ V Y ++I  L   G++ +A+ +L  M E+ + PDTY Y+ LI   C  G LD A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +     LP+   +  ++  +C+NG  + A ++FNK+   GC P+V  +N +I  
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 436

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           L   G+  +A        +G  P +   +S+G +   D+ +  +++   C  GL+ +A  
Sbjct: 437 LWSCGDRSRA--------LGMVPAM---ISKGID--PDEITYNSLISCLCRDGLVEEAIG 483

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +L  + +SG  P +I+YN ++ G CKV  I+ A+ +F E+  KG RP+  TY  LI G+
Sbjct: 484 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 250/521 (47%), Gaps = 52/521 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+N   K+GK   ++  L+ +  +G  P+    T +I G       ++A R+ +++ +S 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESH 142

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD  AYNA+++GFCK+ +++ A  +L   +  GF+P + +Y+ +I  L   ++   A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               ++  +   P V+ Y ++I      G + +AMKLL +M  RG++PD Y YNA+I+G 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G++++A  L   +  +   P+  ++ IL+      G  D+ +KL  +M   GC P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             ++ LI  LC+ G +++A +   K+ I K  T             D  S   ++   C 
Sbjct: 323 VTYSILISSLCRFGRIDEA-ISVLKVMIEKELT------------PDTYSYDPLISALCK 369

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A  I+  +  +G LPDI+ YN+++   CK GN N AL++F +L+  G  P+  +
Sbjct: 370 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSS 429

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I+ L        A  +   M   G  P    Y SL++  CR               
Sbjct: 430 YNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCR--------------- 474

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLIGLCQDGQV 651
                               G VE AI GLL+ D + + F+  +  Y I L+GLC+  ++
Sbjct: 475 -------------------DGLVEEAI-GLLD-DMEQSGFRPTVISYNIVLLGLCKVRRI 513

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
            +A+ +F+ ++E        + + LI G+   G+   AM++
Sbjct: 514 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 225/463 (48%), Gaps = 34/463 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+++  + LI G       E A +++ E+ +    P+ F Y  VISG C++N+ + A ++
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQV 169

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +MK  G  PD V YN ++   C  R++  AL +L     D  +P + +Y+ LI+    
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               +EA     +M    + PD+  Y  +IRG+ + G V+ A +L++ +  +G  PD   
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L++ F + G  D+   L  E++ R   PN  T++ILI  +CR G +D+A  +   M 
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TLFLRLSQGGN-- 456
           +    P    ++ LI  LCK G L+ A  ++ Y +  G  P      T+   L + GN  
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409

Query: 457 ---RVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
               + +K          +S  TM+    + G   +A  ++  +   G  PD ITYNSLI
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLI 469

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  C+ G +  A+ L  +++  G RP  ++Y  ++ GL +V R +DA  +F +M + GC 
Sbjct: 470 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 529

Query: 564 PSPAVYKSLMT------WSCRRRKFSLAFSLWLQYLRDISGRD 600
           P+   Y  L+       W  R     LA SL   + RD+  +D
Sbjct: 530 PNETTYILLIEGIGFAGW--RTEAMELANSL---FSRDVISQD 567



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 196/401 (48%), Gaps = 6/401 (1%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R  L    + + +I  L       L    LD+L   N       + +LI      G   +
Sbjct: 176 RGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINE 235

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A++   +M      PD+Y YNA++    ++ +   A  +   +    C P+++++++L+ 
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLR 295

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                GK +   K++ EM  RG  PNK TY+I+IS LC+  R DEA  +   M +   +P
Sbjct: 296 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 355

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  +Y+ L++  CK  R+D A+ ++     +G +P + +Y+ ++  L +    ++A   +
Sbjct: 356 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 415

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            K+      P+V  Y  MI  L   G    A+ ++  M  +GI PD   YN+LI   C  
Sbjct: 416 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRD 475

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           GL+++A  L  ++ +    P   ++ I++ G+C+   +DDA  +F +M + GC P+   +
Sbjct: 476 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535

Query: 417 NALIDGLCKAG----ELEKANLLFYKMEIGKNPTLFLRLSQ 453
             LI+G+  AG     +E AN LF +  I ++   F RL++
Sbjct: 536 ILLIEGIGFAGWRTEAMELANSLFSRDVISQDS--FKRLNK 574



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 165/418 (39%), Gaps = 85/418 (20%)

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +AGK  +++  L  +  +G  PD      LIKGF +   +++A S  +EI +      +H
Sbjct: 90  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILE------SH 142

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T                              P V  +NA+I G CK  ++E A  +  +M
Sbjct: 143 TE-----------------------------PDVFAYNAVISGFCKVNQIEAATQVLNRM 173

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        +    + D  +   M+   C    +  A  +L QL     +P +ITY
Sbjct: 174 -------------KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITY 220

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             LI      G IN A+KL +E+  +GL PD  TY  +I G+ +    E A  +   +  
Sbjct: 221 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS 280

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            GC P    Y  L+      R F L    W           DE  K + E   +G   N 
Sbjct: 281 KGCEPDVISYNILL------RAF-LNQGKW-----------DEGEKLVAEMFSRGCEPNK 322

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +                 Y+I +  LC+ G++ EA+++  V++E +      S   LI  
Sbjct: 323 VT----------------YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           LCK G LDLA+ +  Y + NG +  P + NY        K+     A  +  +++ +G
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCL--PDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 256/528 (48%), Gaps = 39/528 (7%)

Query: 48  FRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            RFF W+ K  R+     +   V+ +L     +      LD+L       VS VF  L+ 
Sbjct: 62  LRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLL 121

Query: 107 GYYKVGD--CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           G    GD  C  AL +       D     Y+ N  L I    ++F       +++   +C
Sbjct: 122 G----GDRPCANALIT-------DMLVLAYVTN--LEIHSACEVFRRVQDYGFKLSLNSC 168

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P       L++ L K  +T     +  EM +R I PN  T+ I I+GLC+  + ++A  
Sbjct: 169 NP-------LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAED 221

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCK---LRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           +   +K  G SP+ V YN L++G CK     ++  A A+L+    +   P   +++ LID
Sbjct: 222 VIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLID 281

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  + +    A   + +M  + ++P++V Y  +I GLS  GK+ +A+ L   M   G+ P
Sbjct: 282 GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKP 341

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   +NALI GFC   ++ +AR L  +I ++D +PN  TF  +I   C+ GM+++   L 
Sbjct: 342 NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALH 401

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           N M   G FP+V  +N LI GLC+   +  A  L  +ME   N  L            D 
Sbjct: 402 NSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME---NYEL----------KADV 448

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++  +C  G   KA K+L ++   G  P+ +TYN+L++G+C  GN+  ALK+  +
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQ 508

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           ++ +G R + VTY  LI G  +  + EDA R+  +M + G  P+   Y
Sbjct: 509 MEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 190/400 (47%), Gaps = 26/400 (6%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            +  A  + R  +  GF   L S + L+  L +     E    Y++M + +I+P++  + 
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC---DLGLLDQARSLQVEI 369
           + I GL +AGK+  A  ++ D++  G  P+   YN LI G C     G + +A ++  E+
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 PN  TF  LI G C++  V  A+  F +M++ G  P++  +N+LI+GL   G+L
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324

Query: 430 EKANLLFYKM-EIGKNPTL--FLRLSQG-------------------GNRVHDKASLQTM 467
           ++A  L+ KM  +G  P +  F  L  G                    + V +  +  TM
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ +C AG++ + + +   + + G  P++ TYN LI G C+  N+  A KL  E++   L
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           + D VTY  LI G  +      A ++ G+M   G  P+   Y +LM   C       A  
Sbjct: 445 KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK 504

Query: 588 LWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
           +  Q  ++    +  +    I+ F + G++E+A + L EM
Sbjct: 505 VRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEM 544



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 1/318 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+ +  +      F  LI G+ K  +   A  +F +M+    +P++  YN+++N    
Sbjct: 261 LKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSN 320

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A+A++ +MV L   PNIVTF+ LING  K    + A K+ D++ ++ ++PN  T
Sbjct: 321 NGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  +I   C+    +E + L   M D G  P+   YN L+ G C+ + V  A  LL   E
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
                  + +Y+ LI G  +     +A     +M    ++P+ V Y  ++ G    G +K
Sbjct: 441 NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLK 500

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A+K+ + M + G   +   YN LIKGFC  G L+ A  L  E+ ++   PN  T+ ++ 
Sbjct: 501 AALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVR 560

Query: 386 CGMCRNGMVDDAQ-KLFN 402
             M   G + D +  L+N
Sbjct: 561 LEMLEKGFIPDIEGHLYN 578



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 86/338 (25%)

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ KR   PN  TF I I G+C+ G ++ A+ +   ++  G  P++  +N LIDG CK G
Sbjct: 190 EMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG 249

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                                                        +AG +++A  IL ++
Sbjct: 250 ---------------------------------------------SAGKMYRADAILKEM 264

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             +   P+ IT+N+LI+GFCK  N+  A   F+E+Q +GL+P+ VTY +LINGL    + 
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           ++A  ++ +M   G  P+   + +L+   C+++                     E+ K  
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIK------------------EARKLF 366

Query: 608 EEFLQKGEVENAIQ-----------GLLEMDFKLNDFQL--------APYTIWLIGLCQD 648
           ++  ++  V NAI            G++E  F L++  L        + Y   + GLC++
Sbjct: 367 DDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRN 426

Query: 649 GQVKEALNIFSVL--VECKAIVTPPSCVKLIHGLCKRG 684
             V+ A  + + +   E KA V   +   LI G CK G
Sbjct: 427 QNVRAAKKLLNEMENYELKADVVTYNI--LIGGWCKDG 462



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 145/380 (38%), Gaps = 62/380 (16%)

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--- 439
           +L+     N  +  A ++F +++  G   S+   N L+  L K  E  +   ++ +M   
Sbjct: 135 MLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR 194

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            I  N T F                   +   C AG ++KA  ++  +   G  P+I+TY
Sbjct: 195 RIQPNLTTF----------------NIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTY 238

Query: 500 NSLINGFCK---VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           N+LI+G CK    G +  A  + KE+    + P+ +T+ TLI+G  + +    A   F +
Sbjct: 239 NTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEE 298

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M + G  P+   Y SL+       K   A +LW                           
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW--------------------------- 331

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
                 ++ +  K N   +  +   + G C+   +KEA  +F  + E   +    +   +
Sbjct: 332 ----DKMVGLGLKPN---IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I   CK G ++    +    L  G        N L+  L  +++ +   A  LL  M++ 
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRA--AKKLLNEMENY 442

Query: 737 GYDLDACLYPKTKSLLPGPW 756
               D   Y    ++L G W
Sbjct: 443 ELKADVVTY----NILIGGW 458


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 234/472 (49%), Gaps = 13/472 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+  F  M      P +  +  +L    + + F  A+++  +M      P++VT S+LIN
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                G+   +  +L ++ + G  PN    T ++ GLC      ++     K+   G   
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V+Y  LLNG CK+     A+ LLR  E     P +  Y+ +IDGL + K  +EAY +Y
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M    I PDV+ Y  +I G   AG++  A  LL++M  + I PD Y Y  LI   C  
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L +A++L   + K    PN  T++ L+ G C  G V +A+++F+ M +    PSV  +
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N +I+GLCK   +++A  L             LR     N V +  +  ++++  C +G 
Sbjct: 416 NIMINGLCKGKSVDEAMNL-------------LREMLHKNVVPNTVTYNSLIDGLCKSGR 462

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           I  A  ++ +L   G   D+ITY SL++G CK  N++ A+ LF +++ +G++P+  TY  
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           LI+GL +  R ++A ++F  +   GC      Y  ++   C+      A ++
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM 574



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 229/471 (48%), Gaps = 26/471 (5%)

Query: 116 KALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L S  KMK F               +PD+   + ++N          + +V  +++KL
Sbjct: 137 KILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKL 196

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN +  + L+ GL   G+ + ++   D++  +G   N+ +Y  +++GLC+I     A
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 256

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +L   ++D    PD V YN +++G CK + V+EA          G  P + +YS LI G
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              A +   A++   +M  + I PDV  Y ++I  L + GK+K+A  LL  M + G+ P+
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ L+ G+C +G +  A+ +   + + +  P+  ++ I+I G+C+   VD+A  L  
Sbjct: 377 VVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLR 436

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M      P+   +N+LIDGLCK+G +  A  L  ++     P              D  
Sbjct: 437 EMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPA-------------DVI 483

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++++  C    + KA  + M++ E G  P+  TY +LI+G CK   +  A KLF+ +
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +KG   D  TY  +I GL +    ++A  +  +M  NGC P    ++ ++
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIII 594



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 233/509 (45%), Gaps = 49/509 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++ +  M+ +   P+I+ F  ++  L K      AI +  +M  +GI P+  T +I+I+
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C + +   ++ +  K+   G  P+ +    L+ G C    V ++L         GF  
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY  L++GL +      A    R + +    PDVV+Y  +I GL +   V +A    
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           ++M  RGI PD   Y+ LI GFC  G L  A SL  E+  ++  P+ +T+TILI  +C+ 
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G + +A+ L   M K G  P+V  ++ L+DG C  GE+  A  +F+ M +   NP++   
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV--- 412

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       S   M+   C    + +A  +L ++     +P+ +TYNSLI+G CK G
Sbjct: 413 -----------CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG 461

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  AL L KEL  +G   D +TY +L++GL +    + A  +F +M + G  P+   Y 
Sbjct: 462 RITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 521

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +L+   C+                    R   + K  +  L KG                
Sbjct: 522 ALIDGLCK------------------GARLKNAQKLFQHILVKGCC-------------- 549

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
               +  Y + + GLC++G + EAL + S
Sbjct: 550 --IDVYTYNVMIGGLCKEGMLDEALAMKS 576



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 222/460 (48%), Gaps = 15/460 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +G    +    GK+ +   QP+  I   ++     K     +L  + ++V  
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               N V++  L+NGL K G+T  AIK+L  +  R   P+   Y  +I GLC+    +EA
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           Y  + +M   G  PD + Y+ L+ GFC   ++  A +LL         P + +Y+ LID 
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA      M +E ++P+VV Y  ++ G    G+V +A ++   M +  + P 
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +I G C    +D+A +L  E+  ++ +PNT T+  LI G+C++G +  A  L  
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           ++   G    V  + +L+DGLCK   L+KA  LF KM E G  P              +K
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQP--------------NK 517

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  C    +  A K+   +   G   D+ TYN +I G CK G ++ AL +  +
Sbjct: 518 YTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSK 577

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           ++  G  PD+VT+  +I  L   D  + A ++  +M   G
Sbjct: 578 MEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/538 (26%), Positives = 245/538 (45%), Gaps = 51/538 (9%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+   +  ++  L ++     A  L  +M+  G  PD V  + L+N FC L ++  + ++
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    K G+ P     + L+ GL       ++  ++ K+  +  + + V YG ++ GL +
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ + A+KLL  + +R   PD   YN +I G C   L+++A     E+  R   P+  T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           ++ LICG C  G +  A  L N+M      P V  +  LID LCK G+L++A NLL    
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G  P +               +  T+++ YC  G +H A +I   + ++   P + +Y
Sbjct: 370 KEGVKPNV--------------VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +ING CK  +++ A+ L +E+  K + P++VTY +LI+GL +  R   A  +  ++  
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G       Y SL+   C+ +    A +L+++            MK           E  
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAIALFMK------------MK-----------ERG 512

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           IQ         N +    YT  + GLC+  ++K A  +F  ++     +   +   +I G
Sbjct: 513 IQP--------NKYT---YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGG 561

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           LCK G LD A+ +      NG I        ++RSL    +N K  A  LL  M + G
Sbjct: 562 LCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDK--AEKLLHEMIAKG 617



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 44/419 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G  K+G+   A++    +++   +PDV +YN +++   + +L   A   Y EM 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+++T+S LI G   +G+   A  +L+EMT + I P+ +TYTI+I  LC+  +  
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 221 EAYRLFLKMKDSGCSPDFV-----------------------------------AYNALL 245
           EA  L   M   G  P+ V                                   +YN ++
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK + VDEA+ LLR       VP   +Y+ LIDGL ++ R   A    +++      
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQP 479

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            DV+ Y  ++ GL +   +  A+ L   M+ERGI P+ Y Y ALI G C    L  A+ L
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              I  +    + +T+ ++I G+C+ GM+D+A  + +KME  GC P    F  +I  L +
Sbjct: 540 FQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFE 599

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRL----SQGGNRV----HDKASLQTMVEQYCTAGL 476
             E +KA  L ++M I K    F       S   N+V    H+K +L+     + ++G+
Sbjct: 600 KDENDKAEKLLHEM-IAKGLLHFRNFHGERSPVTNKVIVNFHEKETLKPTAYLFASSGV 657



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 215/529 (40%), Gaps = 66/529 (12%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +PN+VT S+LIN L   G+   +  +L ++ + G  PN  T T ++ G         A +
Sbjct: 8   VPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG-----ETRCAIK 62

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L   ++D    P     ++L +                 F      P +           
Sbjct: 63  LPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQP--PSIHDV-------- 112

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
                 +A + +  M   +  P ++ +G ++  L +      A+ L   M  +GI PD  
Sbjct: 113 ----VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLV 168

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             + LI  FC LG +  + S+  +I K    PNT   T L+ G+C  G V  +    +K+
Sbjct: 169 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKV 228

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
              G   +   +  L++GLCK GE   A  L             LR+ +  +   D    
Sbjct: 229 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKL-------------LRMIEDRSTRPDVVMY 275

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T+++  C   L+++AY    ++   G  PD+ITY++LI GFC  G + GA  L  E+ L
Sbjct: 276 NTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL 335

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           K + PD  TY  LI+ L +  + ++A  + G M + G  P+   Y +LM   C       
Sbjct: 336 KNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLV----- 390

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                                        GEV NA Q    M     +  +  Y I + G
Sbjct: 391 -----------------------------GEVHNAKQIFHAMVQTEVNPSVCSYNIMING 421

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           LC+   V EA+N+   ++    +    +   LI GLCK G +  A+D+ 
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 119/500 (23%), Positives = 206/500 (41%), Gaps = 48/500 (9%)

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG--FCDLGL--L 359
           I P++V   ++I  L   G++  +  +L  + + G  P++     L+KG   C + L  +
Sbjct: 7   IVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPRM 66

Query: 360 DQARSLQVEIWKRDSLPNT----------HTFTILICGM--CRNGMVDDAQKLFNKMEKA 407
            + RS +  +W   SL ++           TF           + +V DA   FN M   
Sbjct: 67  IEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLLM 126

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL---------FLRLSQGGNR 457
              PS+  F  ++  L K      A  L  +ME+ G  P L         F  L Q    
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186

Query: 458 VH------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +   L T+++  C  G + K+     ++   G   + ++Y +L+NG
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK+G    A+KL + ++ +  RPD V Y T+I+GL +     +A+  + +M   G  P 
Sbjct: 247 LCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPD 306

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
              Y +L+   C   +   AFSL  +  L++I+         I+   ++G+++ A   L 
Sbjct: 307 VITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLG 366

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCK 682
            M  +     +  Y+  + G C  G+V  A  IF  +V+ +  V P  C    +I+GLCK
Sbjct: 367 VMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE--VNPSVCSYNIMINGLCK 424

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
              +D AM++    L    +      N L+  L   K  +   A  L+  +   G   D 
Sbjct: 425 GKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGL--CKSGRITSALDLMKELHHRGQPADV 482

Query: 743 CLYPKTKSLLPGPWNTREME 762
             Y    SLL G    + ++
Sbjct: 483 ITY---TSLLDGLCKNQNLD 499



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 98/209 (46%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  S + +I+ L K    D     L E+   NV   +  +  LI G  K G    AL+  
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++       DV  Y ++L+   + Q    A+A++ +M +    PN  T++ LI+GL K 
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + + A K+   +  +G   + +TY ++I GLC+    DEA  +  KM+D+GC PD V +
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFV 270
             ++    +    D+A  LL      G +
Sbjct: 591 EIIIRSLFEKDENDKAEKLLHEMIAKGLL 619


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 227/492 (46%), Gaps = 27/492 (5%)

Query: 112 GDCEK-ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            DC   AL  + +M      P  + +        R      ALA+   M +  C+P+ V 
Sbjct: 155 ADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVL 214

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           +  +I+ L   G    A  +LDEM   G   +  T+  ++ GLC + R  EA RL  +M 
Sbjct: 215 YQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMM 274

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             GC P  V Y  LL G C+ R+ DEA A+L    +   V      + +I G     +  
Sbjct: 275 TQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV----MLNTVIRGCLTEGKLA 330

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A   Y  M  +   PDV  Y +++ GL + G+   A+++L +M E+G  P+   Y+ L+
Sbjct: 331 RATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLL 390

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC  G+ D AR++  ++  +    N+  +  +I  +C++G +D A +L  +M+  GC 
Sbjct: 391 HSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCK 450

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM--------EIGKNPTLFLRLSQG----GNRV 458
           P +  +N +I  LC    +E+A  +F  +         I  N  +   L  G    G R+
Sbjct: 451 PDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRL 510

Query: 459 H----------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                      D  S   +++  C  G + ++  +L ++   G  P+  +YN LIN  CK
Sbjct: 511 ASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCK 570

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G +  AL+L KE+  +GL PD VTY TLINGL +V     A  +  ++P     P    
Sbjct: 571 AGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 630

Query: 569 YKSLMTWSCRRR 580
           Y  L++W C+ R
Sbjct: 631 YNILISWHCKVR 642



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 245/544 (45%), Gaps = 54/544 (9%)

Query: 62  SFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           SF S + V+S L + +       LY + L +     V   +  F V      ++G    A
Sbjct: 141 SFRSYNVVLSTLARADCHADALLLYRRMLRD----RVPPTTFTFGVAARALCRLGRAGDA 196

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L     M    C PD  +Y  V++    +     A  +  EM+ + C  ++ TF+ L+ G
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA--------------- 222
           L   G+   A +++D M  +G +P+  TY  ++ GLC+  +ADEA               
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVML 316

Query: 223 ----------------YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
                             L+  M   GC PD   Y+ L++G CKL R   A+ +L   E+
Sbjct: 317 NTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE 376

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +YS L+    R   +D+A A   +M  +    +   Y  +I  L + GK+  
Sbjct: 377 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQ 436

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +L+ +M+ +G  PD   YN +I   C+  L+++A  +   + +   + N  T+  LI 
Sbjct: 437 ATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIH 496

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP 445
            + RNG   +  +L ++M   GC   V  +N LI  LCK G ++++  L  +M   G  P
Sbjct: 497 ALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKP 556

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             F              S   ++ + C AG +  A ++  ++   G  PDI+TYN+LING
Sbjct: 557 NNF--------------SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 602

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CKVG  + AL L ++L  + + PD VTY  LI+   +V   +DA  +  +    G  P+
Sbjct: 603 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPN 662

Query: 566 PAVY 569
              +
Sbjct: 663 ERTW 666



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 241/528 (45%), Gaps = 51/528 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  +++++++ L+++     A+ +   M +  + P  FT+ +    LC++ RA +A  L
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC PD V Y  +++       V EA  LL      G    + +++ L+ GL  
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R  EA     +M  +   P VV YG +++GL    +  +A  +L  + E  +V     
Sbjct: 260 LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV----M 315

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
            N +I+G    G L +A  L   +  +   P+ HT++IL+ G+C+ G    A ++ ++ME
Sbjct: 316 LNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME 375

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + GC P++  ++ L+   C+ G  + A  +  +M + K    F   SQG N +       
Sbjct: 376 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM-LAKG---FSMNSQGYNGI------- 424

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
             +   C  G + +A +++ ++   G  PDI TYN++I   C    +  A  +F+ L  +
Sbjct: 425 --IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEE 482

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+  + +TY TLI+ L R  R ++  R+  +M  +GC      Y  L+   C+       
Sbjct: 483 GVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKE------ 536

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
                       G  D SM  +EE + KG              K N+F    Y + +  L
Sbjct: 537 ------------GNVDRSMALLEEMVTKG-------------IKPNNFS---YNMLINEL 568

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           C+ G+V++AL +   ++         +   LI+GLCK G+   A+++ 
Sbjct: 569 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 616



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 204/449 (45%), Gaps = 54/449 (12%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F  L+ G  +    ++A    G++ E +    V + N V+     +     A  
Sbjct: 281 SVVTYGF--LLQGLCRTRQADEACAMLGRLPEVN----VVMLNTVIRGCLTEGKLARATE 334

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +Y  M    C P++ T+S+L++GL K G+   A++MLDEM ++G  PN  TY+ ++   C
Sbjct: 335 LYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 394

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +    D+A  +  +M   G S +   YN ++   CK  ++D+A  L++  +  G  P + 
Sbjct: 395 RNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDIC 454

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ +I  L      +EA   +R + EE +  + + Y  +I  L   G+ ++ ++L S+M
Sbjct: 455 TYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEM 514

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G   D   YN LIK  C  G +D++ +L  E+  +   PN  ++ +LI  +C+ G V
Sbjct: 515 LLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKV 574

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            DA +L  +M   G  P +  +N LI+GLCK G                           
Sbjct: 575 RDALELSKEMLNQGLTPDIVTYNTLINGLCKVG--------------------------- 607

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                                  H A  +L +L      PDI+TYN LI+  CKV  ++ 
Sbjct: 608 ---------------------WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 646

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           A  L  +    G+ P+  T+G ++    R
Sbjct: 647 AAMLLDKAISGGIVPNERTWGMMVQNFVR 675



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 191/429 (44%), Gaps = 55/429 (12%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   SY+ ++  L RA  + +A   YR+M  +++ P    +GV  R L   G+  DA+ L
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M   G VPD   Y  +I      G + +A  L  E+       + +TF  L+ G+C 
Sbjct: 200 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCG 259

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G V +A +L ++M   GC PSV  +  L+ GLC+  + ++A  +     +G+ P +   
Sbjct: 260 LGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM-----LGRLPEV--- 311

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    +   L T++    T G + +A ++   +   G  PD+ TY+ L++G CK+G
Sbjct: 312 ---------NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLG 362

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               A+++  E++ KG  P+ VTY TL++   R    +DA  +  QM   G + +   Y 
Sbjct: 363 RFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYN 422

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            ++   C+                   G+ D++ + ++E   +G   +            
Sbjct: 423 GIIYALCK------------------DGKLDQATRLVQEMKSQGCKPD------------ 452

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY----L 686
               +  Y   +  LC +  ++EA +IF  L+E   +    +   LIH L + G     L
Sbjct: 453 ----ICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGL 508

Query: 687 DLAMDVFLY 695
            LA ++ L+
Sbjct: 509 RLASEMLLH 517



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 128/268 (47%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LD++ +   S+ S  +  +I    K G  ++A     +MK   C+PD+  YN ++     
Sbjct: 406 LDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCN 465

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             L   A  ++  +++   + N +T++ LI+ L ++G+ +  +++  EM   G   +  +
Sbjct: 466 NDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVIS 525

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I  LC+    D +  L  +M   G  P+  +YN L+N  CK  +V +AL L +   
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P + +Y+ LI+GL +      A     K+  E + PD+V Y ++I    +   + 
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGF 353
           DA  LL      GIVP+   +  +++ F
Sbjct: 646 DAAMLLDKAISGGIVPNERTWGMMVQNF 673



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI    + G  ++ L    +M    CQ DV  YN ++    ++     ++A+  EM
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     PN  ++++LIN L K+GK   A+++  EM  +G+ P+  TY  +I+GLC++   
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 609

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  K+ +    PD V YN L++  CK+R +D+A  LL      G VP   ++  +
Sbjct: 610 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMM 669

Query: 280 IDGLFRAKRYDEAY 293
           +    R     E Y
Sbjct: 670 VQNFVRQTVNLEGY 683


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 281/591 (47%), Gaps = 55/591 (9%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           NC PN+++++++INGL K G+ + A  +  EM  +G  PN  TY  VI GLC+    D+A
Sbjct: 134 NCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKA 193

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +  +M D G                   +++EA+ LL+     G  P + +YS LID 
Sbjct: 194 EAVLQQMFDKG-------------------QLEEAVRLLKKMSGGGLQPDVVTYSLLIDY 234

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +  R  EA   +  M      PD   Y  ++ G +  G + D   LL+ M + GI  +
Sbjct: 235 YCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLE 294

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + +N LI+ +     LD+A +  +E+ ++   PN  T+T +I  +C+ G V+DA   F+
Sbjct: 295 DHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFS 354

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P +  F +LI GLC  GE +K   L ++M           +++G   +H  A
Sbjct: 355 QMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEM-----------INRG---IHPNA 400

Query: 463 S-LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
             L T+++  C  G + +A+    Q+   G  PD+++Y  LI+G+C  G ++ ++KL   
Sbjct: 401 IFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGR 460

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   GLRPD+VTY  L+NG  +  R +DA  ++ +M      P+   Y  ++       +
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEF--LQKGEVENA--------IQGLLEMDFKLN 631
              A   +++ +      D      I  +  +  G  EN+         QGL   +F+L 
Sbjct: 521 VVAAREFYMKIV------DSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQL- 573

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
             ++  + I ++GL + G++ +A ++FS ++    +        +I    + G L+ + +
Sbjct: 574 --EVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDE 631

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           +FL   KNG     R  N ++R LL   D ++   Y  L ++    Y ++A
Sbjct: 632 LFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTY--LTKIDEKEYSVEA 680



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 151/612 (24%), Positives = 279/612 (45%), Gaps = 81/612 (13%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE----------FDCQPD 132
           + T+ ++    ++  +  F +LI  +  VG  + ALE   +             ++C P+
Sbjct: 79  FNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPN 138

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS----------- 181
           V  YN V+N  F++     A  +++EM+     PNIVT++ +I+GL K+           
Sbjct: 139 VLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQ 198

Query: 182 -----GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
                G+ E A+++L +M+  G+ P+  TY+++I   C+I R  EA  +F  M   G +P
Sbjct: 199 QMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNP 258

Query: 237 DFVAYNALLNG-----------------------------------FCKLRRVDEALALL 261
           D   Y  LL+G                                   + K   +D+A+   
Sbjct: 259 DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAF 318

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
               + GF P + +Y+ +ID L +A R ++A + + +M  E + PD++ +  +I GL   
Sbjct: 319 IEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTI 378

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+ K   KL  +M  RGI P+    N ++   C  G + +A     +I      P+  ++
Sbjct: 379 GEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSY 438

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-- 439
           TILI G C +G +D++ KL  +M   G  P    ++AL++G CK G ++ A  L+ +M  
Sbjct: 439 TILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFS 498

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            ++  N   +                  ++     AG +  A +  M++ +SG    I T
Sbjct: 499 KDVKPNAITY----------------NIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN ++ G C+   ++ AL++F+ L+ K  + +  T+  +I GL +V R  DA  +F  + 
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVE 617
            +G  P   +Y  ++           +  L+L   ++    +  ++ +I  + L+KG+V 
Sbjct: 603 PSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662

Query: 618 NAIQGLLEMDFK 629
            A   L ++D K
Sbjct: 663 RAGTYLTKIDEK 674



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 235/521 (45%), Gaps = 60/521 (11%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           AV+  +      +   + L ++  G +      + +LI  Y K+G C +A   F  M   
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI----VTFSLLINGLSKSGK 183
              PD Y Y  +L+    K     AL   ++++ L     I      F++LI   +K+  
Sbjct: 255 GQNPDAYTYRTLLHGYATKG----ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A+    EM Q+G  PN  TYT VI  LC+  R ++A   F +M   G SPD + + +
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTS 370

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G C +    +   L       G  P     + ++D L +  R  EA+ ++ ++    
Sbjct: 371 LIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVG 430

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++PDVV Y ++I G    GK+ +++KLL  M   G+ PD   Y+AL+ G+C  G +D A 
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +L  E++ +D  PN  T+ I++ G+   G V  A++ + K+  +G    +  +N ++ GL
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           C+   +++A                LR+ Q                     GL  K +++
Sbjct: 551 CENSFVDEA----------------LRMFQ---------------------GLRSKEFQL 573

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                      ++ T+N +I G  KVG I  A  LF  +   GL PD++ YG +I     
Sbjct: 574 -----------EVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIE 622

Query: 544 VDREEDAFRIFGQMPQNGCTPSP----AVYKSLMTWSCRRR 580
               E++  +F  M +NGCT +     A+ + L+     RR
Sbjct: 623 EGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRR 663



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 205/411 (49%), Gaps = 17/411 (4%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           ++    S++ + +NP            R  L  +A+  A++ M       DL    + + 
Sbjct: 244 ARNIFDSMVRRGQNPDA-------YTYRTLLHGYATKGALVDM------HDLLALMIQD- 289

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
               + +   VF +LI  Y K    +KA+ +F +M++    P+V  Y  V++I  +    
Sbjct: 290 ---GIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRV 346

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A++ + +MV     P+I+TF+ LI+GL   G+ +   K+  EM  RGI PN      +
Sbjct: 347 EDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTI 406

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +  LC+  R  EA+  F ++   G  PD V+Y  L++G+C   ++DE++ LL      G 
Sbjct: 407 MDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGL 466

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +YS L++G  +  R D+A A YR+MF + ++P+ + Y +++ GL  AG+V  A +
Sbjct: 467 RPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAARE 526

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
               + + GI      YN ++ G C+   +D+A  +   +  ++      TF I+I G+ 
Sbjct: 527 FYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL 586

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + G + DA+ LF+ +  +G  P   ++  +I    + G LE+++ LF  ME
Sbjct: 587 KVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSME 637



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 166/352 (47%), Gaps = 4/352 (1%)

Query: 59  RLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R + F+ N    + VI +L K    +       ++ S  +S     F  LI G   +G+ 
Sbjct: 322 RQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEW 381

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +K  +   +M      P+    N +++   ++   L A   + +++ +   P++V++++L
Sbjct: 382 KKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+G    GK + +IK+L  M   G+ P+  TY+ +++G C+  R D+A  L+ +M     
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ + YN +L+G     RV  A          G    + +Y+ ++ GL      DEA  
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            ++ +  ++ + +V  + +MI GL + G++ DA  L S +   G+VPD   Y  +I+   
Sbjct: 562 MFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHI 621

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + GLL+++  L + + K     N+ T   ++  +   G V  A     K+++
Sbjct: 622 EEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDE 673



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 191/433 (44%), Gaps = 48/433 (11%)

Query: 327 AMKLLSDMRERGI---VPDTYCYNALIKGFCDLGLLD-------QARSLQVEIWKRDSL- 375
           A+ L + M + G+     D   +  LI+ FC++GLLD       +     V +   D   
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 376 --PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  ++ ++I G+ + G VD A  LF++M   G  P++  +N++IDGLCKA  ++KA 
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKA- 193

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                                      +A LQ M ++    G + +A ++L +++  G  
Sbjct: 194 ---------------------------EAVLQQMFDK----GQLEEAVRLLKKMSGGGLQ 222

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TY+ LI+ +CK+G    A  +F  +  +G  PD+ TY TL++G        D   +
Sbjct: 223 PDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDL 282

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
              M Q+G      V+  L+    +      A + +++  +     +  +  ++ + L K
Sbjct: 283 LALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCK 342

Query: 614 -GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G VE+A+    +M  +     +  +T  + GLC  G+ K+   +   ++          
Sbjct: 343 AGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIF 402

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              ++  LCK G +  A D F   +  G  ++P V +Y +    +  D K   +  LL R
Sbjct: 403 LNTIMDSLCKEGRVLEAHDFFDQIIHVG--VKPDVVSYTILIDGYCLDGKMDESIKLLGR 460

Query: 733 MKSVGYDLDACLY 745
           M S+G   D   Y
Sbjct: 461 MVSIGLRPDNVTY 473



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 136/276 (49%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G   +A + F ++     +PDV  Y  +++          ++ +   MV +   P+ V
Sbjct: 412 KEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNV 471

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T+S L+NG  K+G+ + A+ +  EM  + + PN  TY I++ GL    R   A   ++K+
Sbjct: 472 TYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKI 531

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
            DSG       YN +L G C+   VDEAL + +      F   + +++ +I GL +  R 
Sbjct: 532 VDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRI 591

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A + +  +    + PD ++YG+MI+   E G ++++ +L   M + G   ++   NA+
Sbjct: 592 GDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAI 651

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           ++   + G + +A +   +I +++      T  +LI
Sbjct: 652 VRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLI 687



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 37/265 (13%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           +V V  DV  + +LI GY   G  +++++  G+M     +PD   Y+A+LN   +     
Sbjct: 428 HVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVD 487

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            ALA+Y EM   +  PN +T++++++GL  +G+   A +   ++   GI     TY IV+
Sbjct: 488 DALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVL 547

Query: 211 SGLCQINRADEAYRLFLKMKD-----------------------------------SGCS 235
            GLC+ +  DEA R+F  ++                                    SG  
Sbjct: 548 GGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLV 607

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD + Y  ++    +   ++E+  L  S EK+G      + + ++  L        A  +
Sbjct: 608 PDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTY 667

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSE 320
             K+ E++   +     ++I  +SE
Sbjct: 668 LTKIDEKEYSVEASTAVLLISIVSE 692


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 175/658 (26%), Positives = 294/658 (44%), Gaps = 69/658 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G  K G+ + A +   K+  F   P++++YNA++N   + +    A  +Y  M  +N
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMN 388

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              N VT+S+LI+   K G  +VA      M + GI    + Y  +I+G C+      A 
Sbjct: 389 LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAE 448

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L+ KM + G  P    +  L++G+CK  +V++A  L R   +    P + +++ LI GL
Sbjct: 449 FLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGL 508

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                  EA   + +M E KI+P  V Y VMI G  +A  +  A +LL DM   G+VPDT
Sbjct: 509 CSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDT 568

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y  LI G C  G +  A+    ++ K++   N   ++ L+ G C  G + +A     +
Sbjct: 569 YTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCE 628

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M + G    +     LIDG  K  ++++   L  KM + G  P              D  
Sbjct: 629 MIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRP--------------DSV 674

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
              +M++ Y   G   K+ + L  +      P+++TY + +NG CKVG I+ A  LF+++
Sbjct: 675 IYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKM 734

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
               + P+SVTYG  ++ L +    ++A  +  +M + G   + A Y  L+   C+    
Sbjct: 735 LTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKL--- 790

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                          GR  E+ K + E  + G   + I                 Y+  +
Sbjct: 791 ---------------GRLIEATKVLSEMTENGIFPDCI----------------TYSTII 819

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNG 700
              C+ G V  A+ ++  ++  +  V P S     LI+G C  G LD A ++    L  G
Sbjct: 820 YEHCRSGDVGAAVELWDTML--RKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRG 877

Query: 701 FILRPR-----------VCNYLLRSLLFSKD-NKKVHAYH-LLCRMKSVGYDLDACLY 745
             L+PR           VCN+L+     + + +  +  YH +L R   +  ++  CLY
Sbjct: 878 --LKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLY 933



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 182/722 (25%), Positives = 308/722 (42%), Gaps = 99/722 (13%)

Query: 27  PFLSKT----TVTSVIMKT-KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDL 81
           P +S T     V  V++ T  + ++  RFF +    K +    ++ A++   L  N   L
Sbjct: 54  PSISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQN--KL 111

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
           +W   + L    +   SD  FV           EK LES  + K          +++ L 
Sbjct: 112 FWPA-NSLLHTLLLRGSDPKFVF----------EKFLESHKQCK----------FSSTLG 150

Query: 142 IAFRKQLFLLALAVYYEMVKL------NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
             F    +L    V+  +V L        LP + T S ++NGL +  K  +  ++ DE  
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G+ P+ +T + VI  LC++     A    L M+ +      V YN L++G CK   V 
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EAL + +S  + G    + +Y  L+ G  R +++D+      +M E    P       ++
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL + G +  A  L+  +   G +P+ + YNALI   C    LD+A  L   +   +  
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            N  T++ILI   C+ GM+D A+  F +M + G   ++  +N+LI+G CK G+L  A  L
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 436 FYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           + KM   G  PT                +  T++  YC    + KA+K+  ++ E    P
Sbjct: 451 YTKMINEGLEPT--------------ATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAP 496

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            + T+ +LI G C    +  A KLF E+  + ++P  VTY  +I G  +    + AF + 
Sbjct: 497 SVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELL 556

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI------------------ 596
             M  NG  P    Y+ L++  C   + S A      ++ D+                  
Sbjct: 557 EDMLHNGLVPDTYTYRPLISGLCSTGRVSAA----KDFIDDLHKKNLKLNEMCYSALLHG 612

Query: 597 ---SGRDDESMKSIEEFLQKG----------EVENAIQ--------GLLEMDFKLNDFQL 635
               GR  E++ +  E +Q+G           ++ A++        GLL+   K+ D  L
Sbjct: 613 YCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLK---KMYDQGL 669

Query: 636 AP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
            P    YT  +    ++G  K++     ++V  K      +    ++GLCK G +D A  
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729

Query: 692 VF 693
           +F
Sbjct: 730 LF 731



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 196/421 (46%), Gaps = 15/421 (3%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMK-TKNPQV--GFRFFIWAAKRKRLRSFASNSAVISMLL 74
           I   LEP     + TT T++I    K+ QV   F+ +    +++   S  + +A+I  L 
Sbjct: 455 INEGLEP-----TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLC 509

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
             N      +  DE+    +      + V+I GY K  + +KA E    M      PD Y
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTY 569

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y  +++          A     ++ K N   N + +S L++G    G+   A+    EM
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK---L 251
            QRGI  +   + ++I G  +       + L  KM D G  PD V Y ++++ + K    
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           ++  E L L+ +   +   P + +Y+  ++GL +    D A   + KM    I P+ V Y
Sbjct: 690 KKSGECLDLMVT---EKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTY 746

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           G  +  L++ G +K+A  L  +M  +G++ +T  YN LI+GFC LG L +A  +  E+ +
Sbjct: 747 GCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTE 805

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  T++ +I   CR+G V  A +L++ M + G  P    FN LI G C  G L+K
Sbjct: 806 NGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDK 865

Query: 432 A 432
           A
Sbjct: 866 A 866



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 11/228 (4%)

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           ++ L++ + +   +  A+ + + +    L P+  T   ++NGL R+ +    + +F +  
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFS--LWLQYLRDISGRDDESMKS----IEEFLQ 612
             G  P P    +++   C  + F  A    LW++     S R D S+ +    I    +
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWME-----SNRFDLSIVTYNVLIHGLCK 265

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G V  A++    +  K     +  Y   ++G C+  Q  + + + + +VE   + T  +
Sbjct: 266 GGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAA 325

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
              L+ GL K+G +D A D+ +   + GF+    V N L+ +L   +D
Sbjct: 326 VSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 179/690 (25%), Positives = 314/690 (45%), Gaps = 60/690 (8%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S  S  + +L+    +    E AL  FG++     + ++ I N +L      +    AL
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIVI 210
            +  +   +L C+P++ ++S+L+  L   GK+  A  +L  M + G +  PN   Y  VI
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    ++A  LF +M   G  PD V YN++++  CK R +D+A A LR       +
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+ LI G     ++ EA   +++M    I PDVV   +++  L + GK+K+A  +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              M  +G  PD + YN ++ G+   G L     L   +      P+ +TF +LI     
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            GM+D A  +FN+M   G  P V  +  +I  LC+ G+++ A   F +M           
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM----------- 468

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           + QG     DK +   +++ +CT G + KA +++ ++  +G   DI+ ++S+IN  CK+G
Sbjct: 469 IDQG--VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 526

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A  +F      GL PD+V Y  L++G   V + E A R+F  M   G  P+  VY 
Sbjct: 527 RVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYC 586

Query: 571 SLMTWSCRRRKFSLAFSLWLQYL-RDI----------------SGRDDESMKSIEEFLQK 613
           +L+   C+  +     SL+ + L R I                +GR   +     E  + 
Sbjct: 587 TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTES 646

Query: 614 GEVEN------AIQGLLE----------------MDFKLNDFQLAPYTIWLIGLCQDGQV 651
           G   +       ++GL +                M+ K+N   L      + G+ Q  +V
Sbjct: 647 GIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL---NTMIDGMFQTRRV 703

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           +EA ++F+ +   + +    +   +I  L K G ++ A D+F      G     R+ N++
Sbjct: 704 EEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 763

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           +R LL  K N+ V A   L ++    + L+
Sbjct: 764 VRELL--KKNEIVRAGAYLSKIDERNFSLE 791



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 255/560 (45%), Gaps = 33/560 (5%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   + +  N LL GFC+ +R DE
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      P+VV Y  
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   YN+++   C    +D+A +   ++  + 
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LPN  T+  LI G    G   +A ++F +M +    P V   + L+  LCK G++++A 
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 358 DVFDTMAMKGQNPDVF--------------SYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD  T+N LI  +   G ++ A+ +F E++  G++PD VTY T+I  L R+ + +DA  
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 523

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           K G V +A Q + ++   +    L P    Y++ + G C  G++++AL +F  +V   A 
Sbjct: 524 KLGRVMDA-QNIFDLTVNVG---LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AG 577

Query: 668 VTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
           + P   V   L++G CK G +D  + +F   L+ G  ++P    Y +      +  + V 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG--IKPSTILYSIIIDGLFQAGRTVP 635

Query: 726 AYHLLCRMKSVGYDLDACLY 745
           A      M   G  +D C Y
Sbjct: 636 AKMKFHEMTESGIAMDICTY 655



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 182/355 (51%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   V      +  +I+   ++G  + A+E F +M +    PD Y YN ++     
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 489

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               L A  +  E++      +IV FS +IN L K G+   A  + D     G+ P+   
Sbjct: 490 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 549

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y++++ G C + + ++A R+F  M  +G  P+ V Y  L+NG+CK+ R+DE L+L R   
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P    YS +IDGLF+A R   A   + +M E  I  D+  Y +++RGL +     
Sbjct: 610 QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L  ++R   +  +    N +I G      +++A+ L   I +   +PN  T++I+I
Sbjct: 670 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMI 729

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + + G+V++A+ +F+ M+ AGC P+  + N ++  L K  E+ +A     K++
Sbjct: 730 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKID 784



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 35/254 (13%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D + S  +     V+  L++GY K+G  ++ L  F +M +   +P   +Y       
Sbjct: 568 RVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY------- 620

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                                       S++I+GL ++G+T  A     EMT+ GI  + 
Sbjct: 621 ----------------------------SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDI 652

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY IV+ GL +    DEA  LF +++      + +  N +++G  + RRV+EA  L  S
Sbjct: 653 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 712

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   VP + +YS +I  L +    +EA   +  M     EP+  L   ++R L +  +
Sbjct: 713 ISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 772

Query: 324 VKDAMKLLSDMRER 337
           +  A   LS + ER
Sbjct: 773 IVRAGAYLSKIDER 786


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 163/619 (26%), Positives = 281/619 (45%), Gaps = 49/619 (7%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RS 91
           TV + +       V   FF WA   ++ R F                 LY  T D L  +
Sbjct: 119 TVVASLASESGSMVALCFFYWAVGFEKFRHF---------------MRLYLVTADSLIAN 163

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           GN+    +V   ++  + ++G   +A+     M+     P     N VL IA    L   
Sbjct: 164 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDY 223

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  V+ EM      P+  +F L++ G  + GK + A + L  M QRG +P+  T T+++S
Sbjct: 224 AENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILS 283

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+    + A   F KM D G  P+ + + +L++G CK   + +A  +L    ++G+ P
Sbjct: 284 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 343

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-EPDVVLYGVMIRGLSEAGKVKDAMKL 330
            + +++ LIDGL +    ++A+  + K+    I +P+V  Y  MI G  +  K+  A  L
Sbjct: 344 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEML 403

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            S M+E+G+ P+   Y  LI G C  G  D+A  L   +      PN +T+  +I  +C+
Sbjct: 404 FSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCK 463

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
                +A +L NK    G       +  LI   CK  ++++A   F +M    N T F  
Sbjct: 464 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM----NKTGF-- 517

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
             +   R+++      ++  +C    + ++ ++   +   G +P   TY S+I+G+CK G
Sbjct: 518 --EADMRLNN-----ILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEG 570

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           + + ALK F  ++  G  PDS TYG+LI+GL +    ++A +++  M   G +P      
Sbjct: 571 DFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 630

Query: 571 SLMTWSCRRRKFSLAF--------SLWLQYLRDISGR--DDESMKSIEEFLQKGEVENAI 620
           +L    C+R   + A          LW++ +R +  +   ++ +     F QK       
Sbjct: 631 TLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQK------- 683

Query: 621 QGLLEMDFKLNDFQLAPYT 639
             LLE D   +   LA +T
Sbjct: 684 --LLEKDSSADRVTLAAFT 700



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 212/465 (45%), Gaps = 58/465 (12%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +L  F ++ R++EA+ ++   +  G  P   + +C+++    +   D A   + +M    
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD   + +M+ G    GK+++A + LS M +RG +PD      ++   C+ GL+++A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA- 294

Query: 364 SLQVEIWKRDSL------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
                IW    +      PN   FT LI G+C+ G +  A ++  +M + G  P+V    
Sbjct: 295 -----IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 349

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ALIDGLCK G  EKA  LF K+         +R       VH   +  +M+  YC    +
Sbjct: 350 ALIDGLCKRGWTEKAFRLFLKL---------VRSDIYKPNVH---TYTSMIGGYCKEDKL 397

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           ++A  +  ++ E G  P++ TY +LING CK GN + A +L   +  +G RP+  TY  +
Sbjct: 398 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAV 457

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+ L +  R  +A+ +  +    G       Y  L+   C++     A + + +   + +
Sbjct: 458 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM--NKT 515

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G                          E D +LN+  +A +       C+  ++KE+  +
Sbjct: 516 G-------------------------FEADMRLNNILIAAF-------CRQKKMKESERL 543

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           F ++V    + T  +   +I G CK G  DLA+  F    ++G +
Sbjct: 544 FQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCV 588



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/412 (22%), Positives = 183/412 (44%), Gaps = 50/412 (12%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+R  SE G++ +A+ ++ DM+ +G+ P +   N +++   + GL+D A ++  E+  R 
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P++ +F +++ G  R+G + +A +  + M + G  P       ++  LC+ G + +A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             F KM ++G  P L               +  ++++  C  G I +A+++L ++  +G 
Sbjct: 296 WYFRKMIDLGFKPNLI--------------NFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 341

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGL-RPDSVTYGTLINGLQRVDREEDAF 551
            P++ T+ +LI+G CK G    A +LF +L    + +P+  TY ++I G  + D+   A 
Sbjct: 342 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAE 401

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            +F +M + G  P+   Y +L+   C+   F  A+ L       ++  DDE  +      
Sbjct: 402 MLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYEL-------MNLMDDEGFRP----- 449

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
                                  +  Y   +  LC+  +  EA  + +    C       
Sbjct: 450 ----------------------NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGV 487

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
           +   LI   CK+  +  A+  F    K GF    R+ N L+ +    K  K+
Sbjct: 488 TYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 539


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 236/476 (49%), Gaps = 13/476 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF +L+    ++   ++A + F  MKE    P +   N +L++  +     +A  +Y 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM +L     + TF++++N L K GK + A + +  M   G  PN  +Y  +I G     
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             + A R+   M+  G  PD   Y +L++G CK  R++EA  L     + G VP   +Y+
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG       + A+++  +M ++ I P V  Y +++  L   G++ +A  ++ +MR++
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI+PD   YN LI G+   G   +A  L  E+  +   P   T+T LI  + R   + +A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF K+   G  P V MFNA++DG C  G +E+A +L  +M+    P            
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP----------- 505

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +  T+++  C  G + +A  +L ++   G  PD I+YN+LI+G+ + G+I  A +
Sbjct: 506 --DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 563

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  E+   G  P  +TY  LI  L +    + A  +  +M   G +P  + Y SL+
Sbjct: 564 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 232/500 (46%), Gaps = 50/500 (10%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F+ F    ++  +    + + ++S+ LK N  ++ W    E+    +S     F ++++
Sbjct: 176 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 235

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
              K G  +KA E  G M+    +P+V  YN +                           
Sbjct: 236 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI--------------------------- 268

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
                   I+G S  G  E A ++LD M  +GI P+ +TY  +ISG+C+  R +EA  LF
Sbjct: 269 --------IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            KM + G  P+ V YN L++G+C    ++ A +      K G +P + +Y+ L+  LF  
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 380

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R  EA    ++M ++ I PD + Y ++I G S  G  K A  L ++M  +GI P    Y
Sbjct: 381 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 440

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            +LI        + +A  L  +I  +   P+   F  ++ G C NG V+ A  L  +M++
Sbjct: 441 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 500

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQ 465
               P    FN L+ G C+ G++E+A +L  +M+  G  P              D  S  
Sbjct: 501 KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP--------------DHISYN 546

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  Y   G I  A+++  ++   G  P ++TYN+LI   CK    + A +L KE+  K
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606

Query: 526 GLRPDSVTYGTLINGLQRVD 545
           G+ PD  TY +LI G+  VD
Sbjct: 607 GISPDDSTYLSLIEGMGNVD 626



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 26/476 (5%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + F LL+    +  + + A K    M ++GI+P   T   ++S   ++NR + A+ L+ +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M     S     +N ++N  CK  ++ +A   +   E  GF P + SY+ +I G      
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A      M  + IEPD   YG +I G+ + G++++A  L   M E G+VP+   YN 
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C+ G L++A S + E+ K+  +P+  T+ +L+  +   G + +A  +  +M K G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------LFLRLSQGGNRVHDK 461
             P    +N LI+G  + G  +KA  L  +M   G  PT      L   LS+  NR+ + 
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR-NRMKEA 456

Query: 462 ASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             L                  MV+ +C  G + +A+ +L ++      PD +T+N+L+ G
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G +  A  L  E++ +G++PD ++Y TLI+G  R    +DAFR+  +M   G  P+
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
              Y +L+   C+ ++  LA  L  + +      DD +  S+ E +  G V+  ++
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM--GNVDTLVE 630



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 171/350 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LD +R   +   S  +  LISG  K G  E+A   F KM E    P+   YN +++  
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             K     A +   EMVK   +P++ T++LL++ L   G+   A  M+ EM ++GI+P+ 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY I+I+G  +   A +A+ L  +M   G  P  V Y +L+    +  R+ EA  L   
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  ++ ++DG       + A+   ++M  + + PD V +  +++G    GK
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V++A  LL +M+ RGI PD   YN LI G+   G +  A  ++ E+      P   T+  
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           LI  +C+N   D A++L  +M   G  P    + +LI+G+     L + N
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 632



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 156/346 (45%), Gaps = 46/346 (13%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R S+ ++  F +L+   C     D+A K F  M++ G  P +   N ++    K   +E 
Sbjct: 151 RLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 210

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A +L+ +M         LR+S          +   MV   C  G + KA + +  +   G
Sbjct: 211 AWVLYAEM-------FRLRISS------TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 257

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++++YN++I+G+   GNI GA ++   +++KG+ PDS TYG+LI+G+ +  R E+A 
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD---------------- 595
            +F +M + G  P+   Y +L+   C +     AFS   + ++                 
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377

Query: 596 -ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            + GR  E+   I+E  +KG + +AI                 Y I + G  + G  K+A
Sbjct: 378 FMEGRMGEADDMIKEMRKKGIIPDAIT----------------YNILINGYSRCGNAKKA 421

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            ++ + ++      T  +   LI+ L +R  +  A D+F   L  G
Sbjct: 422 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 38/307 (12%)

Query: 441 IGKNPTLFLRLSQGGNRVHDKASL--QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           I  N  LF  L+   +R+  K+S+    +V   C      +A+K    + E G +P I T
Sbjct: 135 IATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIET 194

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            N +++ F K+  +  A  L+ E+    +     T+  ++N L +  + + A    G M 
Sbjct: 195 CNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME 254

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G  P+   Y ++                                  I  +  +G +E 
Sbjct: 255 GLGFKPNVVSYNTI----------------------------------IHGYSSRGNIEG 280

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A + L  M  K  +     Y   + G+C++G+++EA  +F  +VE   +    +   LI 
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 340

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           G C +G L+ A       +K G +      N L+ +L    + +   A  ++  M+  G 
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM--EGRMGEADDMIKEMRKKGI 398

Query: 739 DLDACLY 745
             DA  Y
Sbjct: 399 IPDAITY 405


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 236/476 (49%), Gaps = 13/476 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF +L+    ++   ++A + F  MKE    P +   N +L++  +     +A  +Y 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM +L     + TF++++N L K GK + A + +  M   G  PN  +Y  +I G     
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             + A R+   M+  G  PD   Y +L++G CK  R++EA  L     + G VP   +Y+
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG       + A+++  +M ++ I P V  Y +++  L   G++ +A  ++ +MR++
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI+PD   YN LI G+   G   +A  L  E+  +   P   T+T LI  + R   + +A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF K+   G  P V MFNA++DG C  G +E+A +L  +M+    P            
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP----------- 527

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ +  T+++  C  G + +A  +L ++   G  PD I+YN+LI+G+ + G+I  A +
Sbjct: 528 --DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 585

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  E+   G  P  +TY  LI  L +    + A  +  +M   G +P  + Y SL+
Sbjct: 586 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/500 (28%), Positives = 232/500 (46%), Gaps = 50/500 (10%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F+ F    ++  +    + + ++S+ LK N  ++ W    E+    +S     F ++++
Sbjct: 198 AFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVN 257

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
              K G  +KA E  G M+    +P+V  YN +                           
Sbjct: 258 VLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI--------------------------- 290

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
                   I+G S  G  E A ++LD M  +GI P+ +TY  +ISG+C+  R +EA  LF
Sbjct: 291 --------IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            KM + G  P+ V YN L++G+C    ++ A +      K G +P + +Y+ L+  LF  
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 402

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R  EA    ++M ++ I PD + Y ++I G S  G  K A  L ++M  +GI P    Y
Sbjct: 403 GRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTY 462

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            +LI        + +A  L  +I  +   P+   F  ++ G C NG V+ A  L  +M++
Sbjct: 463 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDR 522

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQ 465
               P    FN L+ G C+ G++E+A +L  +M+  G  P              D  S  
Sbjct: 523 KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP--------------DHISYN 568

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  Y   G I  A+++  ++   G  P ++TYN+LI   CK    + A +L KE+  K
Sbjct: 569 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628

Query: 526 GLRPDSVTYGTLINGLQRVD 545
           G+ PD  TY +LI G+  VD
Sbjct: 629 GISPDDSTYLSLIEGMGNVD 648



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 26/476 (5%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           + F LL+    +  + + A K    M ++GI+P   T   ++S   ++NR + A+ L+ +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M     S     +N ++N  CK  ++ +A   +   E  GF P + SY+ +I G      
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A      M  + IEPD   YG +I G+ + G++++A  L   M E G+VP+   YN 
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C+ G L++A S + E+ K+  +P+  T+ +L+  +   G + +A  +  +M K G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------LFLRLSQGGNRVHDK 461
             P    +N LI+G  + G  +KA  L  +M   G  PT      L   LS+  NR+ + 
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR-NRMKEA 478

Query: 462 ASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             L                  MV+ +C  G + +A+ +L ++      PD +T+N+L+ G
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G +  A  L  E++ +G++PD ++Y TLI+G  R    +DAFR+  +M   G  P+
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
              Y +L+   C+ ++  LA  L  + +      DD +  S+ E +  G V+  ++
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM--GNVDTLVE 652



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 171/350 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LD +R   +   S  +  LISG  K G  E+A   F KM E    P+   YN +++  
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             K     A +   EMVK   +P++ T++LL++ L   G+   A  M+ EM ++GI+P+ 
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY I+I+G  +   A +A+ L  +M   G  P  V Y +L+    +  R+ EA  L   
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  ++ ++DG       + A+   ++M  + + PD V +  +++G    GK
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V++A  LL +M+ RGI PD   YN LI G+   G +  A  ++ E+      P   T+  
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           LI  +C+N   D A++L  +M   G  P    + +LI+G+     L + N
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 654



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 156/346 (45%), Gaps = 46/346 (13%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R S+ ++  F +L+   C     D+A K F  M++ G  P +   N ++    K   +E 
Sbjct: 173 RLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 232

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A +L+ +M         LR+S          +   MV   C  G + KA + +  +   G
Sbjct: 233 AWVLYAEM-------FRLRISS------TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 279

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++++YN++I+G+   GNI GA ++   +++KG+ PDS TYG+LI+G+ +  R E+A 
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD---------------- 595
            +F +M + G  P+   Y +L+   C +     AFS   + ++                 
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399

Query: 596 -ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            + GR  E+   I+E  +KG + +AI                 Y I + G  + G  K+A
Sbjct: 400 FMEGRMGEADDMIKEMRKKGIIPDAIT----------------YNILINGYSRCGNAKKA 443

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            ++ + ++      T  +   LI+ L +R  +  A D+F   L  G
Sbjct: 444 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 38/307 (12%)

Query: 441 IGKNPTLFLRLSQGGNRVHDKASL--QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           I  N  LF  L+   +R+  K+S+    +V   C      +A+K    + E G +P I T
Sbjct: 157 IATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIET 216

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            N +++ F K+  +  A  L+ E+    +     T+  ++N L +  + + A    G M 
Sbjct: 217 CNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFME 276

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G  P+   Y ++                                  I  +  +G +E 
Sbjct: 277 GLGFKPNVVSYNTI----------------------------------IHGYSSRGNIEG 302

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A + L  M  K  +     Y   + G+C++G+++EA  +F  +VE   +    +   LI 
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 362

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           G C +G L+ A       +K G +      N L+ +L    + +   A  ++  M+  G 
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM--EGRMGEADDMIKEMRKKGI 420

Query: 739 DLDACLY 745
             DA  Y
Sbjct: 421 IPDAITY 427


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 248/501 (49%), Gaps = 13/501 (2%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           RS  + + +I  L K    ++      +++    +     +  LI G+ K+G  ++ +  
Sbjct: 253 RSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICI 312

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F +MK+ DC PDV  YNA++N   + +    A    +EM      PN+VT+S  I+   K
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + AIK   +M +  + PN+FTYT +I   C+     EA +L  ++  +G   + V 
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y ALL+G C+  R+ EA  + R+    G  P   +Y+ L+ G  +AK  + A    ++M 
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E+ I+PD++LYG ++ GL    ++++A  L+ +++E GI  +   Y  L+  +   G   
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A +L  E+     +    T+  LI G+C++G+V +A   F +M + G  P+V ++ AL+
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           DGLCK    E A  LF +M           L +G   + DK +   +++     G + +A
Sbjct: 613 DGLCKNNCFEVAKKLFDEM-----------LDKG--MMPDKIAYTALIDGNMKHGNLQEA 659

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  ++ E G   D+  Y +LI G    G +  A  L  E+  KG+ PD V Y  LI  
Sbjct: 660 LNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 719

Query: 541 LQRVDREEDAFRIFGQMPQNG 561
              + + ++A  +  +M + G
Sbjct: 720 YYALGKVDEALELQNEMAKRG 740



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 267/539 (49%), Gaps = 22/539 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P   +++A+ +      +   A   + +M K    P   + + L++ LSK G+ +++ 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K   +M   GI  + FTY I+I  LC+    + A  LF +MK++G +PD V YN+L++G 
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            KL  +DE + +    +     P + +Y+ LI+   + +R  +A+ +  +M    ++P+V
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y   I    + G +++A+K   DMR   + P+ + Y +LI   C  G L +A  L  E
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I +     N  T+T L+ G+C  G + +A+++F  M  AG  P+   + AL+ G  KA E
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +E A  +  +M E    P L L                T++   C    + +A  ++ ++
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLL--------------YGTILWGLCNESRLEEAKLLIGEI 526

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            ESG   + + Y +L++ + K G    AL L +E+   GL    VTY  LI+GL +    
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
           ++A   FG+M + G  P+ AVY +L+   C+   F +A  L+ + L      D  +  + 
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 646

Query: 607 IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           I+  ++ G ++ A+     ++E+  +L+   L  YT  + GL   GQV++A N+   ++
Sbjct: 647 IDGNMKHGNLQEALNLRDRMIEIGMELD---LHAYTALIWGLSHSGQVQKARNLLDEMI 702



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 258/559 (46%), Gaps = 20/559 (3%)

Query: 56  KRKRLRSFA---SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           K ++ R F    S +A++  L K    DL  +   ++ +  +      + ++I    K G
Sbjct: 210 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 269

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           D E A   F +MKE    PD+  YN++++   +  L    + ++ +M   +C P+++T++
Sbjct: 270 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 329

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            LIN   K  +   A + L EM   G+ PN  TY+  I   C+     EA + F+ M+  
Sbjct: 330 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 389

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
             +P+   Y +L++  CK   + EAL L+    + G    + +Y+ L+DGL    R  EA
Sbjct: 390 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 449

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R M    + P+   Y  ++ G  +A +++ A  +L +M+E+ I PD   Y  ++ G
Sbjct: 450 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 509

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C+   L++A+ L  EI +     N   +T L+    ++G   +A  L  +M   G   +
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              + ALIDGLCK+G +++A   F +M EIG  P +              A    +V+  
Sbjct: 570 EVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV--------------AVYTALVDGL 615

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C       A K+  ++ + G +PD I Y +LI+G  K GN+  AL L   +   G+  D 
Sbjct: 616 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 675

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             Y  LI GL    + + A  +  +M   G  P   VY  L+       K   A  L  +
Sbjct: 676 HAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNE 735

Query: 592 YLRD--ISGRDDESMKSIE 608
             +   I+G  D ++ S++
Sbjct: 736 MAKRGMITGLSDHAVPSVQ 754



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 239/551 (43%), Gaps = 49/551 (8%)

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           T+   +P    +  + S L ++   +EA   FLKM+     P   + NALL+   K+ R 
Sbjct: 177 TRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRG 236

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D +    +     G    + +Y+ +ID L +    + A + + +M E    PD+V Y  +
Sbjct: 237 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 296

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I G  + G + + + +   M++    PD   YNALI  FC    + +A     E+     
Sbjct: 297 IDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T++  I   C+ GM+ +A K F  M +    P+   + +LID  CKAG L +A  
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEA-- 414

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
                       L   + Q G ++ +  +   +++  C  G + +A ++   +  +G  P
Sbjct: 415 ----------LKLVEEILQAGIKL-NVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +  TY +L++GF K   +  A  + KE++ K ++PD + YGT++ GL    R E+A  + 
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 523

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
           G++ ++G   +  +Y +LM                  Y +  SG+  E++  +EE L  G
Sbjct: 524 GEIKESGINTNAVIYTTLMD----------------AYFK--SGQATEALTLLEEMLDLG 565

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            +   +                 Y   + GLC+ G V+EA++ F  + E           
Sbjct: 566 LIATEV----------------TYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYT 609

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            L+ GLCK    ++A  +F   L  G +        L+   +  K      A +L  RM 
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM--KHGNLQEALNLRDRMI 667

Query: 735 SVGYDLDACLY 745
            +G +LD   Y
Sbjct: 668 EIGMELDLHAY 678


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 265/583 (45%), Gaps = 60/583 (10%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAAK++      S  
Sbjct: 63  ILKIFKWGPDAEKALEVLMLKVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYEHDTSTY 122

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVV-----SDVFFVLISGYYKVGDCEKALESF 121
            A+I  L     +   W+ + E+    V VV     SD+  +L  G  K+    KA+  F
Sbjct: 123 MALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRML--GNAKM--ISKAVAIF 178

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSK 180
            ++K   CQP    YN+++ +   +  +     +Y EM  + +C P+ VT+S LI+   K
Sbjct: 179 YQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCK 238

Query: 181 SGKTEVAIKMLDEMTQRGILPNK-----------------------------------FT 205
            G+ + AI++L+EM   G+ P                                     FT
Sbjct: 239 LGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFT 298

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I GL +  R DEAY  F +M+  GC PD V  N ++N   K  R+D+A+ L     
Sbjct: 299 YTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMG 358

Query: 266 KDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
               +P + +Y+ +I  LF +K R  E  +W+ +M    I P    Y ++I G  +  + 
Sbjct: 359 TLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRT 418

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++
Sbjct: 419 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVM 478

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I  + + G +DDA  LF++M K GC P+V  +NAL+ GL +AG L++A            
Sbjct: 479 IKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEA------------ 526

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
            T   R+ + G  + D  S   ++      G  H+A ++L  + +S   PD ++YN+++ 
Sbjct: 527 LTTMRRMQEHGC-IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLG 585

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                G    A KL KE+ + G   D +TY +++  + +VD E
Sbjct: 586 AMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDHE 628



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 206/473 (43%), Gaps = 20/473 (4%)

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S +I  L  AK   +A A + ++   K +P    Y  MI  L   G+ +   +L ++M  
Sbjct: 159 SDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSN 218

Query: 337 RG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            G   PDT  Y+ALI  FC LG  D A  L  E+      P    +T+LI    +   V 
Sbjct: 219 EGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVH 278

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A  LF +M    C P V  +  LI GL KAG  ++A   F++M             + G
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMR------------REG 326

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNING 514
            R  D   +  M+     AG +  A K+  ++     +P ++TYN++I   F     I+ 
Sbjct: 327 CRP-DTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISE 385

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
               F+ ++  G+ P   TY  LI+G  + +R E A  +  +M + G  P PA Y SL+ 
Sbjct: 386 ISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLID 445

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              + +++ +A  L+ Q L++  G     + +  I+   + G +++A+    EM+     
Sbjct: 446 ALGKAKRYDIAHELF-QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCT 504

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  Y   + GL + G + EAL     + E   I    S   +++GL K G    AM++
Sbjct: 505 PNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEM 564

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L  +K   I +P   +Y       S       A  L+  M  +G++ D   Y
Sbjct: 565 -LSNMKQSAI-KPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITY 615



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 205/485 (42%), Gaps = 23/485 (4%)

Query: 97  VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V D  F+ I   +K G D EKALE    M + D      +    + +  + Q F  A   
Sbjct: 55  VMDERFIRILKIFKWGPDAEKALEVL--MLKVDHWLVREVMKTDVGVNVKMQFFRWAAK- 111

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVISGLC 214
                K N   +  T+  LI  L    +     KM+ EM +  + +      + +I  L 
Sbjct: 112 -----KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLG 166

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF-VPRL 273
                 +A  +F ++K   C P   AYN+++       + ++   L      +G   P  
Sbjct: 167 NAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDT 226

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +YS LI    +  R D A     +M +  ++P   +Y ++I    +   V  A+ L  +
Sbjct: 227 VTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEE 286

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR +   PD + Y  LI+G    G  D+A +   E+ +    P+T     +I  + + G 
Sbjct: 287 MRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGR 346

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +DDA KLF +M    C PSV  +N +I  L ++           K  I +  + F R+ +
Sbjct: 347 LDDAVKLFEEMGTLQCIPSVVTYNTIIKALFES-----------KSRISEISSWFERM-K 394

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G        +   +++ +C      KA  +L ++ E G  P    Y SLI+   K    +
Sbjct: 395 GSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 454

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GCTP+   Y +LM
Sbjct: 455 IAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALM 514

Query: 574 TWSCR 578
           +   R
Sbjct: 515 SGLAR 519


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 235/450 (52%), Gaps = 16/450 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+ ++ F KM +    P +  ++ VL+   + + + L +++++ M       ++ +++++
Sbjct: 51  EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +  +  +A+ ++ +M + G  P+  T + +I+G CQ NR  +A  L  KM++ G 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V YN +++G CK+  V++A+ L    E+DG      +Y+ L+ GL  + R+ +A  
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             R M    I P+V+ +  +I    + GK  +AMKL  +M  R + PD + YN+LI G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +D+A+ +   +  +  LP+  T+  LI G C++  VD+  KLF +M + G      
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N +I G  +AG  + A  +F +M+   N   +  L  G                 C  
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYG----------------LCMN 394

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + KA  +   + +S    DI TYN +I+G CK+GN+  A  LF+ L  KGL+PD V+Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            T+I+G  R  + + +  ++ +M ++G  P
Sbjct: 455 TTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 233/443 (52%), Gaps = 16/443 (3%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           + ++ +M++   LP+IV FS +++ ++KS   ++ I +   M   GI  + ++Y IVI+ 
Sbjct: 54  IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+ +R   A  +  KM   G  PD V  ++L+NGFC+  RV +A+ L+   E+ GF P 
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +  Y+ +IDG  +    ++A   + +M  + +  D V Y  ++ GL  +G+  DA +L+ 
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           DM  R IVP+   + A+I  F   G   +A  L  E+ +R   P+  T+  LI G+C +G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            VD+A+++ + M   GC P V  +N LI+G CK+  +++   LF +M            +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM------------A 341

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           Q G  V D  +  T+++ Y  AG    A +I  ++      P+I TY+ L+ G C    +
Sbjct: 342 QRG-LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRV 397

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             AL LF+ +Q   +  D  TY  +I+G+ ++   EDA+ +F  +   G  P    Y ++
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457

Query: 573 MTWSCRRRKFSLAFSLWLQYLRD 595
           ++  CR+R++  +  L+ +   D
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQED 480



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 215/472 (45%), Gaps = 58/472 (12%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +E   LF KM  S   P  V ++ +L+   K +  D  ++L    E  G    L SY+ +
Sbjct: 51  EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L R  R+  A +   KM +   EPDVV    +I G  +  +V DA+ L+S M E G 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN +I G C +GL++ A  L   + +     +  T+  L+ G+C +G   DA +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L   M      P+V  F A+ID   K G+  +A  L+ +M     +P +F          
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF---------- 280

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  +++   C  G + +A ++L  +   G LPD++TYN+LINGFCK   ++   KL
Sbjct: 281 ----TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+E+  +GL  D++TY T+I G  +  R + A  IF +M      P+   Y  L+   C 
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
             +   A  L+                   E +QK E+E                 +  Y
Sbjct: 394 NWRVEKALVLF-------------------ENMQKSEIE---------------LDITTY 419

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLD 687
            I + G+C+ G V++A ++F  L  CK +   P  V    +I G C++   D
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSL-SCKGL--KPDVVSYTTMISGFCRKRQWD 468



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 203/422 (48%), Gaps = 19/422 (4%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +E    + KM + +  P +V +  ++  ++++      + L   M   GI  D Y YN +
Sbjct: 51  EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C       A S+  ++ K    P+  T + LI G C+   V DA  L +KME+ G 
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V ++N +IDG CK G +  A  LF +ME            + G R  D  +  ++V 
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRME------------RDGVRA-DAVTYNSLVA 217

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C +G    A +++  +     +P++IT+ ++I+ F K G  + A+KL++E+  + + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D  TY +LINGL    R ++A ++   M   GC P    Y +L+   C+ ++      L+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337

Query: 590 LQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +   R + G        I+ + Q G  + A +    MD + N   +  Y+I L GLC +
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN---IRTYSILLYGLCMN 394

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            +V++AL +F  + + +  +   +   +IHG+CK G ++ A D+F      G  L+P V 
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG--LKPDVV 452

Query: 709 NY 710
           +Y
Sbjct: 453 SY 454


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 286/601 (47%), Gaps = 17/601 (2%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E ++  V + +  + ++I    K  D   AL    +M++    P   I+  V+ +  ++ 
Sbjct: 249 EAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQG 308

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             L A+ V  EM+      N+V  + L+ G  K G  + A+++ D+M + GI PN  TY 
Sbjct: 309 KMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYA 368

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I   C+    D+AY ++ +MK+   SP     N+L+ G+ K R  +EA  L       
Sbjct: 369 VIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVAC 428

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +  + +Y+ L+  L +  +  EA + + KM  + + P VV Y  MI G  + G +  A
Sbjct: 429 G-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSA 487

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +  +M E+G+ P+   Y+ L+ G+   G  + A  L   +   +  P+  T  I+I G
Sbjct: 488 NGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIING 547

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
           +C+ G   ++Q    K+ + G  P+   +N +IDG  K G +  A  ++ +M +IG +P 
Sbjct: 548 LCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPN 607

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +F              +   ++  +C +  +  A K++ ++   G   D+  Y +LI+GF
Sbjct: 608 VF--------------TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGF 653

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G++  A +L  ELQ  GL P+ V Y ++I+G +++   E A  +  +M   G     
Sbjct: 654 CRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDL 713

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLE 625
            +Y +L++   +  K   A  L+ + L      D  +    I     KG++ENA + L +
Sbjct: 714 QIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILED 773

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           MD K     +  Y   + G  ++G ++EA  + + +++   +    +   L++G  K G 
Sbjct: 774 MDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833

Query: 686 L 686
           L
Sbjct: 834 L 834



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 173/726 (23%), Positives = 315/726 (43%), Gaps = 75/726 (10%)

Query: 28  FLSKTTVTSVIMKTKN-PQVGFRFFIWAA-KRKRLRSFASNSAVISMLLK---------- 75
           FL++T     ++  +N PQ    +F WA+ KR  ++S  +   ++ +L K          
Sbjct: 61  FLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARN 120

Query: 76  -----------PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
                      P    +  + ++  R  +    S VF  L++ Y K      A++ F  +
Sbjct: 121 LLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSL 180

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E D  P + + N  L+   +  +   A  VY +M       +  T S++I    + GK 
Sbjct: 181 IEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKL 240

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP-------- 236
           E A     E   +G+  +   Y+IVI  +C+   +  A  L  +M+D G  P        
Sbjct: 241 EEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRV 300

Query: 237 ---------------------------DFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
                                      + V    L+ G+CK   +D AL L     ++G 
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGI 360

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +Y+ +I+   +    D+AY  Y +M  + I P V     +IRG  +A   ++A K
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L  +    GI  + + YN+L+   C  G + +A S+  ++ ++   P+  ++  +I G C
Sbjct: 421 LFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G +D A  +F +M + G  P++  ++ L+DG  K G+ E A  L+ +M          
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM---------- 529

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
              +G N      +   ++   C AG   ++   L +L + G +P  +TYN +I+GF K 
Sbjct: 530 ---RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++N AL ++ E+   G+ P+  TY  LING  + +  + A ++  +M   G      VY
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMD 627
            +L+   CR+     A  L L  L+++    ++ + S  I  F +   +E A+     M 
Sbjct: 647 CALIDGFCRKGDMVNASQL-LSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            +     L  YT  + GL ++G++  A  +++ ++    +    +   LIHGLC +G L+
Sbjct: 706 NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLE 765

Query: 688 LAMDVF 693
            A  + 
Sbjct: 766 NAQKIL 771



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/630 (25%), Positives = 291/630 (46%), Gaps = 31/630 (4%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D+Y +   +   G+ + +S    V+I    + G  E+A   F + K    + D   Y+ V
Sbjct: 210 DVYNKMASKGVKGDCATIS----VMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIV 265

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +    +K   + AL +  EM     +P+ V F+ +I    K GK   A+K+  EM   G 
Sbjct: 266 IEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGK 325

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             N    T ++ G C+    D A  LF KM ++G  P+ V Y  ++   CK   +D+A  
Sbjct: 326 PMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYE 385

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE---PDVVLYGVMIR 316
           +    +     P + + + LI G  +A+  +EA     K+F+E +     +V  Y  ++ 
Sbjct: 386 IYNQMKNKDISPTVFNVNSLIRGYLKARSPEEA----SKLFDEAVACGIANVFTYNSLLS 441

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
            L + GK+ +A  +   M  +G+ P    YN +I G C  G +D A  + VE+ ++   P
Sbjct: 442 WLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKP 501

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+++L+ G  + G  + A  L+++M      PS    N +I+GLCKAG   ++    
Sbjct: 502 NLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRL 561

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            K+ + G  PT                +   +++ +   G ++ A  +  ++ + G  P+
Sbjct: 562 KKLVQEGFIPTCM--------------TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPN 607

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + TY +LINGFCK  N++ ALK+  E++ KG+  D   Y  LI+G  R     +A ++  
Sbjct: 608 VFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLS 667

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG 614
           ++ + G +P+  VY S+++   + +    A  L  + + +    D +   + I   L++G
Sbjct: 668 ELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEG 727

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           ++  A +   EM  K     L  Y++ + GLC  GQ++ A  I   +   +  +TP   +
Sbjct: 728 KLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMD--RKCMTPTVFI 785

Query: 675 --KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              LI G  K G L  A  +    L  G +
Sbjct: 786 YNTLITGHFKEGNLQEAFRLHNEMLDKGLV 815



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 265/596 (44%), Gaps = 60/596 (10%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           F+ L+N   K+ +   A+   + + ++ I+P      I +S L + N   EA  ++ KM 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G   D    + ++    +  +++EA    R  +  G      +YS +I+ + +     
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A    R+M ++   P  V++  +I    + GK+ +A+K+  +M   G   +      L+
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
           KG+C  G LD A  L  ++ +    PN  T+ ++I   C+NG +D A +++N+M+     
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+V   N+LI G  KA   E+A+ LF +        +F              +  +++  
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVF--------------TYNSLLSW 442

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G + +A  I  ++   G  P +++YN++I G C+ G+++ A  +F E+  KGL+P+
Sbjct: 443 LCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPN 502

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +TY  L++G  +    E AF ++ +M      PS      ++   C+            
Sbjct: 503 LITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCK------------ 550

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                 +GR  ES   +++ +Q+G +   +                 Y   + G  ++G 
Sbjct: 551 ------AGRTSESQDRLKKLVQEGFIPTCMT----------------YNCIIDGFVKEGS 588

Query: 651 VKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           V  AL +++ +  CK  V+P   +   LI+G CK   +DLA+ V       G  L   V 
Sbjct: 589 VNSALAVYTEM--CKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENM 764
             L+    F +    V+A  LL  ++ VG   +  +Y    S++ G    R+++NM
Sbjct: 647 CALIDG--FCRKGDMVNASQLLSELQEVGLSPNKVVY---SSMISG---FRKLQNM 694



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 167/315 (53%), Gaps = 4/315 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            F LY    D +R  N++       ++I+G  K G   ++ +   K+ +    P    YN
Sbjct: 522 AFGLY----DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   ++     ALAVY EM K+   PN+ T++ LING  KS   ++A+K++DEM  +
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  +   Y  +I G C+      A +L  ++++ G SP+ V Y+++++GF KL+ ++ A
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAA 697

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L +    +G    L  Y+ LI GL +  +   A   Y +M  + I PD++ Y V+I G
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHG 757

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L   G++++A K+L DM  + + P  + YN LI G    G L +A  L  E+  +  +P+
Sbjct: 758 LCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPD 817

Query: 378 THTFTILICGMCRNG 392
             T+ IL+ G  ++G
Sbjct: 818 DTTYDILVNGKVKDG 832



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 195/405 (48%), Gaps = 9/405 (2%)

Query: 39  MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD---LYWQTLDELRSG-NV 94
           +K ++P+   + F  A        F  NS ++S L K          W+ +  +R G   
Sbjct: 410 LKARSPEEASKLFDEAVACGIANVFTYNS-LLSWLCKEGKMSEACSIWEKM--VRKGVRP 466

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVVS  +  +I G+ + GD + A   F +M E   +P++  Y+ +++  F+K     A  
Sbjct: 467 SVVS--YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFG 524

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +Y  M   N  P+  T +++INGL K+G+T  +   L ++ Q G +P   TY  +I G  
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +    + A  ++ +M   G SP+   Y  L+NGFCK   +D AL ++   +  G    + 
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
            Y  LIDG  R      A     ++ E  + P+ V+Y  MI G  +   ++ A+ L   M
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              GI  D   Y  LI G    G L  A  L  E+  +  +P+  T+++LI G+C  G +
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           ++AQK+   M++    P+V ++N LI G  K G L++A  L  +M
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 2/217 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+   K N  DL  + +DE+++  + +   V+  LI G+ + GD   A +   +++E
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671

Query: 127 FDCQPDVYIYNAVLNIAFRK-QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               P+  +Y+++++  FRK Q    AL ++  M+      ++  ++ LI+GL K GK  
Sbjct: 672 VGLSPNKVVYSSMIS-GFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A ++  EM  +GI+P+  TY+++I GLC   + + A ++   M     +P    YN L+
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            G  K   + EA  L       G VP   +Y  L++G
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 262/529 (49%), Gaps = 24/529 (4%)

Query: 2   SSTLNEVLTILDTV---TPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRK 58
           +S ++ ++ IL +V      E AL      L   TV  V+   K+  V   FF W  +  
Sbjct: 2   ASDVSGIVAILTSVGDRPEAEAALAKYSRNLVPNTVGRVLQVIKDVDVSLFFFRWVTRSH 61

Query: 59  RLRSFASN---SAVISMLLKPNGFDLYWQTL-DELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R  S  +N   + ++  L+K       +Q   DEL   +       +  LI G+ K GD 
Sbjct: 62  RGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDM 121

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+A +   +MKE    PDV  +++++           A+  + E V+  C P+ V F++L
Sbjct: 122 ERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNIL 179

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++GL K+ +   A +M++EM++RGI+P+  TY  +I GLC+  R +EA +L   M     
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V YN L+ G+CK      A  L+    + G  P + +++ LI G  +  + D+A  
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M +    P++V Y V+I GL +AG+  +A +LLS+M  RGI+PD   YN+LI  FC
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               ++QA  +Q  + +R  +P+  ++  L   + ++   D+A  L + M  AG  P++ 
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            FN+L++GLC +  L++A  L   M  +G +P                ++ + +V   C 
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPA--------------ASTYEVLVTGLCK 465

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           AG +  A ++L+ +   G  P + +  ++++   + G  + AL  F ++
Sbjct: 466 AGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 228/459 (49%), Gaps = 23/459 (5%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           E++  +C  N +T++ LI G  K+G  E A ++L EM +RG  P+  T++ ++  LC   
Sbjct: 95  ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
               A + F +  +  C+PD V +N L++G CK  ++ EA  ++    + G VP + +Y+
Sbjct: 155 NLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDGL ++ R +EA      M + K+ P++V Y  +I G  + G    A +L+  M + 
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  PD   +N+LI GFC    +D+A  +   + K    PN  T+ +LI G+C  G  ++A
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA----NLLFYKMEIGKNPTLFLRLSQ 453
            +L ++M+  G  P +  +N+LI   C+  ++E+A    NL+   +E G  P        
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM---VERGVIP-------- 381

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  S  T+      +    +A+ +L  + ++G +P++ T+NSL+ G C    ++
Sbjct: 382 ------DGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLD 435

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  L   ++  G  P + TY  L+ GL +  R +DA  +   M   G  P  +   +++
Sbjct: 436 EARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIV 495

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
               R  K  LA   + Q +   S   D S + + EF++
Sbjct: 496 HTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVK 534



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 227/456 (49%), Gaps = 23/456 (5%)

Query: 277 SCLIDGLFRAKRYDEAYAWYR-KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           +CL+  L +A+R+ +AY  +R ++  +  + + + Y  +I G  +AG ++ A +LL++M+
Sbjct: 73  NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           ERG  PD   ++++++  C+ G L  +R++Q      +  P++  F IL+ G+C+   + 
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNL--SRAMQYFRESVECAPDSVLFNILVHGLCKANQLS 190

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQG 454
           +A+++  +M + G  P V  +N+LIDGLCK+  +E+A  L   M   K  P L       
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL------- 243

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +  T++  YC  G    A++++ ++ +SG  PD++T+NSLI+GFC+   I+ 
Sbjct: 244 -------VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDK 296

Query: 515 ALKLFKELQLKGL-RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           A ++   L  KGL  P+ VTY  LI+GL    R  +A  +  +M   G  P    Y SL+
Sbjct: 297 ACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              CR  +   AF +    +      D  S  ++   L K E  +    LL+  F     
Sbjct: 356 GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI 415

Query: 634 -QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             L  +   + GLC   ++ EA ++ +V+          +   L+ GLCK G +D A +V
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEV 475

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
            +  +  G  ++P V +        +++ K+  A H
Sbjct: 476 LVMMVSEG--IQPLVSSSGTIVHTLAREGKQDLALH 509



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 40/411 (9%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  + +  F+      +R       ++S+++  L          Q   E  S   +  S 
Sbjct: 117 KAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSV 174

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F +L+ G  K     +A +   +M E    PDV  YN++++   +      A  +   M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-------------------- 199
           VK    PN+VT++ LI G  K+G T +A ++++ M Q G                     
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294

Query: 200 ---------------LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                           PN  TY ++ISGLC   RA+EA  L  +M   G  PD + YN+L
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +  FC+  ++++A  +     + G +P   SY  L   L +++R+DEA+A    MF+   
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P++  +  ++ GL  + ++ +A  LL+ MR  G  P    Y  L+ G C  G +D A+ 
Sbjct: 415 IPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKE 474

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM---EKAGCFPS 412
           + V +      P   +   ++  + R G  D A   F+++   E   C PS
Sbjct: 475 VLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPS 525



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 172/395 (43%), Gaps = 24/395 (6%)

Query: 358 LLDQARSLQVEIWKRDSLPNTH------TFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           L+   R  Q     RD L   H      T+  LI G C+ G ++ A +L  +M++ G  P
Sbjct: 79  LVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSP 138

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            V   ++++  LC  G L +A + +++  +   P              D      +V   
Sbjct: 139 DVVTHSSIVQALCNTGNLSRA-MQYFRESVECAP--------------DSVLFNILVHGL 183

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C A  + +A +++ +++E G +PD++TYNSLI+G CK   +  A +L + +  + +RP+ 
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VTY TLI G  +      A ++  +M Q+G  P    + SL++  C++ K   A  +   
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL 303

Query: 592 YLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
             + +   +  +    I      G    A + L EMD +     +  Y   +   C++ Q
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +++A  I +++VE   I    S   L   L K    D A  +       G I      N 
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L+  L  S+  +   A HLL  M+ VG D  A  Y
Sbjct: 424 LMEGLCCSR--RLDEARHLLAVMRRVGCDPAASTY 456


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 261/523 (49%), Gaps = 35/523 (6%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           LR FA+           + F++    L E+++  ++       V++S      D +KA+ 
Sbjct: 36  LRGFAAR----------DDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 120 SFGKMKEFDCQ-------PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            F    E  C+       PD   Y A+++  F+   +   L  Y +MV   C P ++T++
Sbjct: 86  YFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYT 145

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +L++GL K+ K E A  + +EM ++G  P+   Y+ +I GL +  R DEA +L   M   
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  P  VAY +++ G CK  R+ EA+  ++   +    PR+ +YS ++ G     + +EA
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEA 265

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           +A   +M +    PD + Y + I  L   G+ ++A K+   M E+G  PD + Y  +I  
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           FC  G +  A  +   + K    PN + +T+++ G  ++  +++A +L+ ++ K G  PS
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGK---NPTLFLRLSQGGNRVHDKASLQTMVE 469
              +N +I+ LCK  ++++A  L  +M+  K    P++               +   ++ 
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSI--------------VTYSMIIH 431

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G+  +A+ +L ++ ++G +PD  TY SLI      G ++ A++L +E+   G+ P
Sbjct: 432 GLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 491

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           D  TYGTL+  L R D +  A+ +  +M +NG TP+   +K++
Sbjct: 492 DDHTYGTLVQILCRSDVDA-AWDLLQEMMRNGHTPNEFTFKAV 533



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 239/505 (47%), Gaps = 57/505 (11%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI--------- 216
           PN+ +F++L+ G +     EV   +L EM  RGI  N  T+ +++S LC           
Sbjct: 27  PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86

Query: 217 --NRADEAYRLF-------------------------------LKMKDSGCSPDFVAYNA 243
             +R +EA RLF                                KM  S C P  + Y  
Sbjct: 87  FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTV 146

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G CK  +V+ A  +     + G  P + +YS LIDGL +A R DEA      M    
Sbjct: 147 LVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARG 206

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P  V Y  ++ GL + G++++A+K + +MR R + P    Y+ ++ G+  +G +++A 
Sbjct: 207 PPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAF 266

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           ++  E+  RD  P+T ++T+ I  +   G  ++A+K+F  M + GC P +  +  +ID  
Sbjct: 267 AVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNF 326

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           CK G +  A             T  LRL        ++     +++ +  +  + +A ++
Sbjct: 327 CKEGSMAAA-------------THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 373

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG--LRPDSVTYGTLINGL 541
             ++ + G LP  +TYN++IN  CK+  ++ AL+L +E+Q +   L P  VTY  +I+GL
Sbjct: 374 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 433

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +V  EE AF +  +M  NG  P    Y SL+       K S A  L  + L+     DD
Sbjct: 434 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 493

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEM 626
            +  ++ + L + +V+ A   L EM
Sbjct: 494 HTYGTLVQILCRSDVDAAWDLLQEM 518



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/512 (22%), Positives = 221/512 (43%), Gaps = 63/512 (12%)

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+  L R  +  +A  +++    E   P+V  + +++RG +     +    LL +M+ RG
Sbjct: 3   LLLALVRGGQLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSL-------QVEIWKRDSLPNTHTFTILICGMCRN 391
           I  +   +  ++   C    LD+A S           +++    P++ T+T ++ G+ + 
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G  D   + + KM  + C P++  +  L+DGLCKA ++E+A  +F +M   G  P     
Sbjct: 120 GNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP----- 174

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +  ++++    AG + +A K++  +   G  P  + Y S++ G CK G
Sbjct: 175 ---------DIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCG 225

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  A+K  +E++ + LRP   TY  ++ G   + + E+AF +  +M    C P      
Sbjct: 226 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPD----- 280

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-------------------IEEFL 611
                       +++++++++ L  I GR +E+ K                    I+ F 
Sbjct: 281 ------------TISYTMFIEALYSI-GRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 327

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           ++G +  A   L  MD          YT+ + G  +  +++EAL ++  +++   + +  
Sbjct: 328 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 387

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +   +I+ LCK   +D A+++     +    L P +  Y +      K   +  A+ LL 
Sbjct: 388 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 447

Query: 732 RMKSVGYDLDACLYPKTKSLLPGPWN-TREME 762
            M   G   D   Y      L G    +R ME
Sbjct: 448 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAME 479


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/655 (25%), Positives = 300/655 (45%), Gaps = 58/655 (8%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N   ++ Q +D    G++S   +    L++   +  + E A   + KM E D   +    
Sbjct: 56  NAVSVFQQAVDS--GGSLSFAGNN---LMATLVRSRNHEVAFSFYRKMLETDTFINFVSL 110

Query: 137 NAVLN--IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           + +L   +  RK  F  A  V   M+K     N+  +++L+ GL ++ +   A+ +L EM
Sbjct: 111 SGLLECFVQMRKTGF--AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            Q  ++P+  +Y  VI G C+    ++A +L  +M+ SGCS   V +  L++ FCK  ++
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           DEA+ LL+  +  G    L  Y+ LI G       D   A + ++ E    P  + Y  +
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           IRG  + G++K+A ++   M ERG+ P+ Y Y  LI G C +G   +A  L   + ++D 
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+ I+I  +C++ +V DA ++   M+K    P    +N+L+ GLC  G+L++A+ 
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASK 408

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L Y M           L        D  S   ++   C    +H+A  I   L E     
Sbjct: 409 LLYLM-----------LKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG 457

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           DI+T N L+N   K G++N A++L+K++    + P+S TY T+I+G  +      A  + 
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M  +   PS   Y  L++  C++     A+ L+ +  RD S  D              
Sbjct: 518 CKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPD-------------- 563

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--S 672
                               +  + I + G  + G +K A ++   +    A ++P   +
Sbjct: 564 --------------------VISFNIMIDGSLKAGDIKSAESLLVGMSH--AGLSPDLFT 601

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
             KLI+   K GYLD A+  F   + +GF     +C+ +L+  +   +  K+  +
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEF 656



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 267/579 (46%), Gaps = 54/579 (9%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVIS--MLLKPNGFDLYWQTLDELRSGN 93
           + +++++N +V F F+    +     +F S S ++   + ++  GF      L   R   
Sbjct: 80  ATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFA 139

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            +V +  + +L+ G  +  +  KA+    +M++    PDV  YN V+      +    AL
Sbjct: 140 FNVYN--YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  EM    C  ++VT+ +LI+   K+GK + A+ +L EM  +G+  +   YT +I G 
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C     D    LF ++ + G SP  + YN L+ GFCKL R+ EA  +     + G  P +
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LIDGL    +  EA      M ++  EP+VV Y ++I  L +   V DA++++  
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVEL 377

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCR- 390
           M++R   PD   YN+L+ G C  G LD+A  L   + K  S   P+  +F  LI G+C+ 
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKG 437

Query: 391 ----------------------------------NGMVDDAQKLFNKMEKAGCFPSVGMF 416
                                             +G V+ A +L+ ++  +   P+   +
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTY 497

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
             +IDG CK G L  A  L  KM          RLS+    V D      ++   C  G 
Sbjct: 498 TTMIDGFCKTGMLNVAKGLLCKM----------RLSELPPSVFD---YNCLLSSLCKKGT 544

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A+++  ++    + PD+I++N +I+G  K G+I  A  L   +   GL PD  TY  
Sbjct: 545 LDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           LIN   ++   ++A   F +M  +G  P   +  S++ +
Sbjct: 605 LINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKY 643



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 228/514 (44%), Gaps = 32/514 (6%)

Query: 192 DEMTQRGILPNKFTYTIV---------ISGLCQIN--RADEAYRLFLKMKDSGCSPDFVA 240
           DE+  R +L  +    +V         +  LC+ +  +   A  +F +  DSG S  F A
Sbjct: 16  DELVVRRLLSQRLCSKLVNTFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGGSLSF-A 74

Query: 241 YNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            N L+    + R  + A +  R   E D F+  + S S L++   + ++   A+     M
Sbjct: 75  GNNLMATLVRSRNHEVAFSFYRKMLETDTFINFV-SLSGLLECFVQMRKTGFAHGVLALM 133

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +     +V  Y ++++GL    +   A+ LL +MR+  ++PD   YN +I+GFC+   L
Sbjct: 134 LKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKEL 193

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           ++A  L  E+       +  T+ ILI   C+ G +D+A  L  +M+  G    + ++ +L
Sbjct: 194 EKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSL 253

Query: 420 IDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I G C  GEL++   LF + +E G +P                 +  T++  +C  G + 
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAI--------------TYNTLIRGFCKLGRLK 299

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A +I   + E G  P++ TY  LI+G C VG    AL+L   +  K   P+ VTY  +I
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           N L +     DA  I   M +    P    Y SL+   C +     A  L    L+D S 
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 599 RDDE--SMKSIEEFLQKG-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
            D +  S  ++   L KG  +  A+     +  KL    +    I L    + G V +A+
Sbjct: 420 TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAM 479

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            ++  +   K +    +   +I G CK G L++A
Sbjct: 480 ELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 1/273 (0%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PDV  +NA+++   +      AL +Y  +V+     +IVT ++L+N   KSG    A++
Sbjct: 421 DPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAME 480

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +  +++   I+PN  TYT +I G C+    + A  L  KM+ S   P    YN LL+  C
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K   +D+A  L    ++D   P + S++ +IDG  +A     A +    M    + PD+ 
Sbjct: 541 KKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLF 600

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I    + G + +A+     M + G  PD +  ++++K     G  D+      ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKL 660

Query: 370 WKRDSLPNTHTFTILICGMC-RNGMVDDAQKLF 401
             +D + +      ++  MC  +G +D A++L 
Sbjct: 661 VDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 117/242 (48%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI G  K     +AL+ +  + E     D+   N +LN   +      A+ ++ ++ 
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               +PN  T++ +I+G  K+G   VA  +L +M    + P+ F Y  ++S LC+    D
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLD 546

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+RLF +M+     PD +++N +++G  K   +  A +LL      G  P L +YS LI
Sbjct: 547 QAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLI 606

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +    DEA +++ KM +   EPD  +   +++     G+     + +  + ++ +V
Sbjct: 607 NRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVV 666

Query: 341 PD 342
            D
Sbjct: 667 LD 668


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 170/676 (25%), Positives = 311/676 (46%), Gaps = 69/676 (10%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            P  + Y  +++   R     LALA + ++++     NI+  + L+ G  ++ +T+ A+ 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 190 MLDEMT-QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSPDFVAYNALLN 246
           +L   T + G +P+ F+Y+I++  LC   ++ +A  L   M + G  CSPD VAY+ +++
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF K   V++A  L +   + G  P   +YS ++  L +A+  D+A A+ R+M  + + P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   Y  +I G S  G+ K+A+++  +MR   I+PD    + L+   C  G + +AR + 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +   PN  ++TI++ G    G + D   LF+ M   G  P +  FN LI      
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 427 GELEKANLLFYKME--------------------IGKNPTLFLRLSQGGNR--VHDKASL 464
           G L+KA ++F +M                     IGK      + +Q  ++    DK + 
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++ +CT G + KA +++ ++  +G   DI+ ++S+IN  CK+G +  A  +F     
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            GL P +V Y  L++G   V + E A R+F  M   G  P+  VY +L+   C+  +   
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 585 AFSLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGEVEN------AIQ 621
             SL+ + L+                   +GR   +     E  + G   N       ++
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLR 647

Query: 622 GLLE----------------MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
           GL +                M+ K+N   L      + G+ Q  +V+EA ++F+ +    
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITL---NTMIAGMFQTRRVEEAKDLFASISRSG 704

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +    +   +I  L K G ++ A D+F      G     R+ N+++R LL  K N+ V 
Sbjct: 705 LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL--KKNEIVR 762

Query: 726 AYHLLCRMKSVGYDLD 741
           A   L ++    + L+
Sbjct: 763 AGAYLSKIDERNFSLE 778



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 269/581 (46%), Gaps = 55/581 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G++K GD  KA + F +M +    PD   Y++V++   + +    A A   +MV
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               LPN  T++ LI G S +G+ + A+++  EM +  ILP+  T ++++  LC+  +  
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F  M   G +P+  +Y  +LNG+     + +   L      DG  P + +++ LI
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 401

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                    D+A   + +M +  ++PDVV Y  +I  L   GK+ DAM+  + M ++G+ 
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD Y Y+ LI+GFC  G L +A+ L  EI       +   F+ +I  +C+ G V DAQ +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F+     G  P+  +++ L+DG C  G++EKA  +F  M   G  P              
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP-------------- 567

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG--------- 510
           +     T+V  YC  G I +   +  ++ + G  P  I YN +I+G  + G         
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 627

Query: 511 ---------------NI-----------NGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                          NI           + A+ LFKEL+   ++ + +T  T+I G+ + 
Sbjct: 628 HEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQT 687

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R E+A  +F  + ++G  P    Y  ++T   +      A  ++   +++     D  +
Sbjct: 688 RRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMF-SSMQNAGCEPDSRL 746

Query: 605 --KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
               + E L+K E+  A   L ++D +  +F L   T  L+
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDER--NFSLEHLTTMLL 785



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/557 (28%), Positives = 255/557 (45%), Gaps = 27/557 (4%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   + +  N LL GFC+ +R DE
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      PDVV Y  
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   Y++++   C    +D+A +   ++  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LPN  T+  LI G    G   +A ++F +M +    P V   + L+  LCK G++++A 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 345 DVFDTMAMKGQNPNVF--------------SYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDI T+N LI  +   G ++ A+ +F E++  G++PD VTY T+I  L R+ + +DA  
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLA-PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           K G V +A Q + ++   +     A  Y++ + G C  G++++AL +F  +V   A + P
Sbjct: 511 KLGRVMDA-QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEP 567

Query: 671 PSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              V   L++G CK G +D  + +F   L+ G      + N ++  L   +  + V A  
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF--EAGRTVPAKV 625

Query: 729 LLCRMKSVGYDLDACLY 745
               M   G  ++ C Y
Sbjct: 626 KFHEMTESGIAMNKCTY 642



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 177/355 (49%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   V      +  +I+   ++G  + A+E F +M +    PD Y Y+ ++     
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               L A  +  E++      +IV FS +IN L K G+   A  + D     G+ P    
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y++++ G C + + ++A R+F  M  +G  P+ V Y  L+NG+CK+ R+DE L+L R   
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P    Y+ +IDGLF A R   A   + +M E  I  +   Y +++RGL +     
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFD 656

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L  ++R   +  +    N +I G      +++A+ L   I +   +P   T++I+I
Sbjct: 657 EAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + + G+V++A+ +F+ M+ AGC P   + N ++  L K  E+ +A     K++
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKID 771



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 204/451 (45%), Gaps = 15/451 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++  N +V S  + ++++GY   G      + F  M      PD+Y +N ++       +
Sbjct: 352 MKGQNPNVFS--YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+ ++ EM      P++VT+  +I  L + GK + A++  ++M  +G+ P+K+ Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C      +A  L  ++ ++G   D V +++++N  CKL RV +A  +       G
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P    YS L+DG     + ++A   +  M    IEP+ V+YG ++ G  + G++ + +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L  +M ++GI P T  YN +I G  + G    A+    E+ +     N  T+ I++ G+
Sbjct: 590 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGL 649

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
            +N   D+A  LF ++       ++   N +I G+ +   +E+A              LF
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK------------DLF 697

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             +S+ G  V    +   M+      GL+ +A  +   +  +G  PD    N ++    K
Sbjct: 698 ASISRSG-LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              I  A     ++  +    + +T   L++
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVD 787



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 112/254 (44%), Gaps = 35/254 (13%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D + S  +     V+  L++GY K+G  ++ L  F +M +   +P   +YN      
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN------ 608

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                                        ++I+GL ++G+T  A     EMT+ GI  NK
Sbjct: 609 -----------------------------IIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY IV+ GL +    DEA  LF +++      + +  N ++ G  + RRV+EA  L  S
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G VP + +YS +I  L +    +EA   +  M     EPD  L   ++R L +  +
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759

Query: 324 VKDAMKLLSDMRER 337
           +  A   LS + ER
Sbjct: 760 IVRAGAYLSKIDER 773


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 275/588 (46%), Gaps = 73/588 (12%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT 85
           L  L+  ++ + ++  ++P     FF  AA  K ++ +   SA+I +L+           
Sbjct: 25  LSSLTPDSLITTVLNCRSPWKALEFF-NAAPEKNIQLY---SAIIHVLVG---------- 70

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY----------- 134
             +L S    +++D+   L+  +     C+ A     ++K     P+VY           
Sbjct: 71  -SKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKME 129

Query: 135 -------IY------------NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
                  +Y            N +L +  +   F L   +Y EM+     P+++TF  LI
Sbjct: 130 LVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLI 189

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +G  + G    A +M DEM  +GI+P    YTI+I GLC  N+ +EA  +   M++ G  
Sbjct: 190 DGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVY 249

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+   YN L++G+CKL    +AL L +    +G VP + ++  LIDGL +      A   
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNL 309

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +  M +  + P++ +Y  +I    + G V +AM L  ++    + PD + Y+ LI+G C 
Sbjct: 310 FVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +   ++A ++  ++ K   L N+ T+  LI G C+ G +D A ++ ++M + G  P+V  
Sbjct: 370 VSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVIT 429

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F+ LIDG CK   L+ A  ++ +M I   +P              D  +   M++ +C  
Sbjct: 430 FSTLIDGYCKIRNLQAAMGIYSEMVIKSLSP--------------DVVTYTAMIDGHCKY 475

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE----------LQL 524
           G + +A K+   + ++G  P+  T + L++G CK G I+ AL+LF E          +  
Sbjct: 476 GSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDA 535

Query: 525 KGLRP---DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            G +P   + V Y  LI+GL +  +   A ++F  M + G  P   +Y
Sbjct: 536 GGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIY 583



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 270/570 (47%), Gaps = 71/570 (12%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KALE F    E + Q    +Y+A++++    +L  L+ A Y               + L+
Sbjct: 45  KALEFFNAAPEKNIQ----LYSAIIHVLVGSKL--LSHARYL-------------LNDLV 85

Query: 176 NGLSKSGK----TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
             L KS K     ++A   L  +      PN +   I++  LC++   +EA  ++ K+  
Sbjct: 86  QNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIV--LCKMELVEEALSMYHKV-- 141

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G +    A N LL    K  R +    +      +G  P + ++  LIDG  R      
Sbjct: 142 -GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLR 200

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + +M  + I P V++Y ++IRGL    K+++A  +   MRE G+ P+ Y YN L+ 
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C L    QA  L  ++     +P+  TF ILI G+C+ G +  A+ LF  M K    P
Sbjct: 261 GYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL------------RLSQGGNR- 457
           ++ ++N+LID  CK G++ +A  LF ++E    +P +F             R  + GN  
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 458 --------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                   + +  +  ++++  C  G + KA +I  Q+ E+G  P++IT+++LI+G+CK+
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            N+  A+ ++ E+ +K L PD VTY  +I+G  +    ++A +++  M  NG TP+    
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+   C+  K S A  L+ + +   + R +     ++    K  + N +         
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCN-----VDAGGSKPSLTNHV--------- 546

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                   YT  + GLCQDGQ  +A+ +FS
Sbjct: 547 -------AYTALIHGLCQDGQFSKAVKLFS 569



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 245/503 (48%), Gaps = 37/503 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++ +L+K   F+L W+  +E+ S  +S     F  LI G  + GD  +A E F +M+ 
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P V +Y  ++           A +++  M ++   PN+ T++ L++G  K    + 
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++  +M   G++P+  T+ I+I GLC+      A  LF+ M     +P+   YN+L++
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK+  V EA+AL    E+    P + +YS LI GL    R +EA   + KM +E I  
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILA 390

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V Y  +I G  + GK+  A+++ S M E G+ P+   ++ LI G+C +  L  A  + 
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +   P+  T+T +I G C+ G + +A KL++ M   G  P+    + L+DGLCK 
Sbjct: 451 SEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKD 510

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G++  A  LF +    + P     +  GG+    K SL             H AY  L  
Sbjct: 511 GKISDALELFTEKIEFQTPR--CNVDAGGS----KPSLTN-----------HVAYTAL-- 551

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                           I+G C+ G  + A+KLF +++  GL+PD V Y  ++ GL +V  
Sbjct: 552 ----------------IHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV-- 593

Query: 547 EEDAFRIFGQMPQNGCTPSPAVY 569
           +     +   M + G  P+ AV+
Sbjct: 594 KYILMMLHADMLKFGVIPNSAVH 616



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 256/543 (47%), Gaps = 47/543 (8%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           NI  +S +I+ L  S     A  +L+++ Q  +  +K  +       CQ+     A+   
Sbjct: 57  NIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHA------CQL-----AFSEL 105

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            ++K S  +P+   Y  L+   CK+  V+EAL++   + K G    + + + L+  L + 
Sbjct: 106 SRLKSSKFTPN--VYGELIIVLCKMELVEEALSM---YHKVGAALTIQACNVLLYVLVKT 160

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R++  +  Y +M    + P V+ +G +I G    G +  A ++  +MR +GIVP    Y
Sbjct: 161 GRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVY 220

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LI+G C    +++A S+   + +    PN +T+  L+ G C+      A +L+  M  
Sbjct: 221 TILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLG 280

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P V  F  LIDGLCK GE++ A  LF  M         ++ S   N     A   +
Sbjct: 281 EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNM---------IKFSVTPN----IAVYNS 327

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++ YC  G + +A  + ++L      PD+ TY+ LI G C V     A  +F+++  +G
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           +  +SVTY +LI+G  +  + + A  I  QM +NG  P+   + +L+   C+ R    A 
Sbjct: 388 ILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447

Query: 587 SLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI--WLI 643
            ++ +  ++ +S         I+   + G ++ A++  L  D   N      YTI   L 
Sbjct: 448 GIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK--LYSDMLDNGITPNCYTISCLLD 505

Query: 644 GLCQDGQVKEALNIFSVLVECK-------------AIVTPPSCVKLIHGLCKRGYLDLAM 690
           GLC+DG++ +AL +F+  +E +             ++    +   LIHGLC+ G    A+
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 691 DVF 693
            +F
Sbjct: 566 KLF 568



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 68/406 (16%)

Query: 314 MIRGLSEAGKVKDAMKL----LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +++ L ++ K   A +L    LS ++     P+ Y    LI   C + L+++A S+    
Sbjct: 84  LVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVY--GELIIVLCKMELVEEALSMY--- 138

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            K  +        +L+  + + G  +   +++ +M   G  PSV  F  LIDG C+ G+L
Sbjct: 139 HKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDL 198

Query: 430 EKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            +A  +F +M + G  PT+ +                 ++   C+   I +A  +   + 
Sbjct: 199 LRAQEMFDEMRVKGIVPTVIV--------------YTILIRGLCSDNKIEEAESMHRAMR 244

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G  P++ TYN+L++G+CK+ N   AL+L++++  +GL PD VT+G LI+GL +    +
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            A  +F  M +   TP+ AVY SL+   C+    S A +L+L+                 
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE----------------- 347

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVEC 664
                                L  F+++P    Y+I + GLC   + +EA NIF  + + 
Sbjct: 348 ---------------------LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +    +   LI G CK G +D A+++     +NG  + P V  +
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG--VEPNVITF 430



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 54/315 (17%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI  Y KVGD  +A+  F +++ F+  PDV+ Y+ ++           A  ++ +M
Sbjct: 324 VYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   L N VT++ LI+G  K GK + A+++  +MT+ G+ PN  T++ +I G C+I   
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNL 443

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  ++ +M     SPD V Y A+++G CK   + EAL L      +G  P   + SCL
Sbjct: 444 QAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCL 503

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIE-----------------PDVVLYGVMIRGLSEAG 322
           +DGL +  +  +A     ++F EKIE                  + V Y  +I GL + G
Sbjct: 504 LDGLCKDGKISDAL----ELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDG 559

Query: 323 KVKDAMKLLSDMRER---------------------------------GIVPDTYCYNAL 349
           +   A+KL SDMR                                   G++P++  +  L
Sbjct: 560 QFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLHADMLKFGVIPNSAVHVIL 619

Query: 350 IKGFCDLGLLDQARS 364
            + + + G L  A++
Sbjct: 620 CECYQESGFLKSAQN 634



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 15/235 (6%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    K   L +  + +++I    K    D   +   ++    V      F  LI GY 
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYC 438

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K+ + + A+  + +M      PDV  Y A+++   +      AL +Y +M+     PN  
Sbjct: 439 KIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCY 498

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQ-------------RGILPNKFTYTIVISGLCQI 216
           T S L++GL K GK   A+++  E  +             +  L N   YT +I GLCQ 
Sbjct: 499 TISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQD 558

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            +  +A +LF  M+  G  PD V Y  +L G  +++ +   + L     K G +P
Sbjct: 559 GQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIP 611


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 193/751 (25%), Positives = 340/751 (45%), Gaps = 69/751 (9%)

Query: 52  IWAAKRKRL-RSFASNSAVISMLLKP---NG-FDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           +W   R+ L R F       ++LL     NG F      L +++S ++S  S  +  ++ 
Sbjct: 210 VWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHISN-SVTYNTILH 268

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
            Y K G  + AL     M+    Q DVY YN +++   R +    A  +   M K +  P
Sbjct: 269 WYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTP 328

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +  T++ LING  + GK   A  + + M ++ ++P+  TYT +I G C+  R D+A  + 
Sbjct: 329 DECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSIL 388

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M+ +G  P  + Y+ALLNG+CK+  +  A+ L+   +  G        + LIDG  + 
Sbjct: 389 SEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQV 448

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
               +A    + MFE+ I+PDV+ Y  +I G+    K+ +  ++LS M++ GI+P+   Y
Sbjct: 449 GEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLY 508

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LI  +C  G + +A    V+I++R  + N      L+    R GM+ +A+     M +
Sbjct: 509 TTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSR 568

Query: 407 AG-CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL-----FLR-LSQGGNRV 458
               F SV  FN +ID  C  G +  A  ++  M   G +P +      LR L QGG+ V
Sbjct: 569 MNISFDSVS-FNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLV 627

Query: 459 H---------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                           D+ +   ++   C  G + +A  +  ++ ++  LPDI TY  L+
Sbjct: 628 QARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILL 687

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ------- 556
           +GFC+ G I  AL + + +  KG+ PD+V Y  L+NGL    + + A  +F +       
Sbjct: 688 SGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGL 747

Query: 557 -----------------------------MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
                                        M QN   P+ A Y  LM    +R +FS +  
Sbjct: 748 YADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLY 807

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           L+   +R     D+ + + +   L + G ++ A++ L +M  +        + I +    
Sbjct: 808 LYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFS 867

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +  ++  AL +F+ +       +  +   +I+GL ++GYLD +  V    L+ G  L+P 
Sbjct: 868 EKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVG--LQPN 925

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
             +Y+       +  +   A+ L   MK++G
Sbjct: 926 HTHYIALVNAKCRVGEIDRAFRLKEEMKAIG 956



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 185/736 (25%), Positives = 322/736 (43%), Gaps = 112/736 (15%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L  +R  +++     +  LI+G+++ G    A   F  M   +  P V  Y  +++   R
Sbjct: 318  LKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCR 377

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             +    AL++  EM     +P+ +T+S L+NG  K      AI +++++  RGI  NK  
Sbjct: 378  NRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTM 437

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR------------ 253
             TI+I G CQ+    +A ++   M + G  PD + Y+AL+NG C++ +            
Sbjct: 438  RTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497

Query: 254  -----------------------VDEAL-------------------ALLRSFEKDG--- 268
                                   V EAL                   ALL +F ++G   
Sbjct: 498  KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMIT 557

Query: 269  -------FVPRLG------SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
                   ++ R+       S++ +ID          A++ Y  M      P+V  Y  ++
Sbjct: 558  EAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617

Query: 316  RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            RGL + G +  A + +S + +     D   +NAL+ G C  G LD+A  L  ++ K + L
Sbjct: 618  RGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL 677

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            P+ HT+TIL+ G CR G +  A  +   M + G  P    +  L++GL   G+++ A+ +
Sbjct: 678  PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYV 737

Query: 436  FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            F+  EI     L+           D  +  +++  Y  +  ++   +++  + ++   P+
Sbjct: 738  FH--EIICKEGLYA----------DCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPN 785

Query: 496  IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              +YN L++G+ K G  + +L L+K +  KG+RPD+VTY  LI GL      + A +   
Sbjct: 786  SASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLE 845

Query: 556  QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL-----WLQYLRDISGRDDESMKSIEEF 610
            +M   G  P   V+  L+T    + K   A  +     WL     +S         I   
Sbjct: 846  KMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLH----MSPSSKTFSAMINGL 901

Query: 611  LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQDGQVKEALNIFSVLVECKA 666
            ++KG ++++ + L EM        L P     I L    C+ G++  A   F +  E KA
Sbjct: 902  IRKGYLDHSHKVLHEM----LQVGLQPNHTHYIALVNAKCRVGEIDRA---FRLKEEMKA 954

Query: 667  IVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
            I   P+ V    +I GLC+ G L+ A+ VF   +++G +  P V  +        K++K 
Sbjct: 955  IGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMV--PTVATFTTLMHSLCKESKI 1012

Query: 724  VHAYHL-----LCRMK 734
              A HL     LCR++
Sbjct: 1013 ADALHLKRLMELCRLR 1028



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 229/446 (51%), Gaps = 22/446 (4%)

Query: 132  DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
            D   +NA+L    R      AL +  +M+K NCLP+I T+++L++G  + GK   A+ +L
Sbjct: 644  DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703

Query: 192  DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCK 250
              M ++G++P+   YT +++GL    +   A  +F ++    G   D +AYN+L+NG+ K
Sbjct: 704  QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK 763

Query: 251  LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R V+    ++    ++   P   SY+ L+ G  +  ++ ++   Y+ M  + I PD V 
Sbjct: 764  SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 823

Query: 311  YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV--- 367
            Y ++I GLSE G +  A+K L  M   GI PD   ++ LI  F +   +  A  LQV   
Sbjct: 824  YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNA--LQVFNC 881

Query: 368  EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
              W   S P++ TF+ +I G+ R G +D + K+ ++M + G  P+   + AL++  C+ G
Sbjct: 882  MKWLHMS-PSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVG 940

Query: 428  ELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            E+++A  L  +M+ IG  P               + +  +++   C  G + +A  +   
Sbjct: 941  EIDRAFRLKEEMKAIGIVPA--------------EVAESSIIRGLCRCGKLEEAVIVFSS 986

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            +  SG +P + T+ +L++  CK   I  AL L + ++L  LR D V+Y  LI GL +   
Sbjct: 987  MMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKH 1046

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSL 572
              DA  ++G+M   G  P+   Y +L
Sbjct: 1047 ISDALDLYGEMKSKGLWPNITTYITL 1072



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 158/665 (23%), Positives = 295/665 (44%), Gaps = 56/665 (8%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +++L+S  +++   +  +LI G+ +VG+  KA +    M E    PDV  Y+A++N   R
Sbjct: 423  MEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCR 482

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                     +   M K   LPN V ++ LI    K+G  + A+K   ++ +RG++ N   
Sbjct: 483  MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVI 542

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            +  ++    +     EA      M     S D V++N +++ +C    +  A ++     
Sbjct: 543  HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMV 602

Query: 266  KDGFVPRLGSY--------------------SCLID---------------GLFRAKRYD 290
            + G+ P + +Y                    SCL+D               G+ R    D
Sbjct: 603  RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLD 662

Query: 291  EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            EA     KM +    PD+  Y +++ G    GK+  A+ +L  M E+G+VPDT  Y  L+
Sbjct: 663  EALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLL 722

Query: 351  KGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
             G  + G +  A  +  EI  ++ L  +   +  L+ G  ++  V+  +++ + M +   
Sbjct: 723  NGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEV 782

Query: 410  FPSVGMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            +P+   +N L+ G  K G+  K+  L+ Y +  G  P              D  + + ++
Sbjct: 783  YPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP--------------DNVTYRLLI 828

Query: 469  EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
                  GLI  A K L ++   G  PD + ++ LI  F +   ++ AL++F  ++   + 
Sbjct: 829  LGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMS 888

Query: 529  PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            P S T+  +INGL R    + + ++  +M Q G  P+   Y +L+   CR  +   AF L
Sbjct: 889  PSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRL 948

Query: 589  WLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
              + ++ I     E  +S  I    + G++E A+     M        +A +T  +  LC
Sbjct: 949  K-EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLC 1007

Query: 647  QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
            ++ ++ +AL++  ++  C+  V   S   LI GLCK  ++  A+D++      G  L P 
Sbjct: 1008 KESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG--LWPN 1065

Query: 707  VCNYL 711
            +  Y+
Sbjct: 1066 ITTYI 1070



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 252/541 (46%), Gaps = 27/541 (4%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V+ + ++N L + G+++     L E   R       T  I+++ LC      +A  +  K
Sbjct: 192 VSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQK 251

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           MK    S + V YN +L+ + K  R   AL +L   E+D     + +Y+ +ID L R KR
Sbjct: 252 MKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKR 310

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
              A+   ++M ++ + PD   Y  +I G    GK+  A  + + M  + +VP    Y  
Sbjct: 311 STRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTT 370

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G+C    +D+A S+  E+     +P+  T++ L+ G C+  M+  A  L   ++  G
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG 430

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              +  M   LIDG C+ GE+ KA  +   M E G +P              D  +   +
Sbjct: 431 ITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDP--------------DVITYSAL 476

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C    +H+  +IL ++ +SG LP+ + Y +LI  +CK G +  ALK F ++  +GL
Sbjct: 477 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGL 536

Query: 528 RPDSVTYGTLINGLQR--VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
             + V +  L++   R  +  E + FR +  M +   +     +  ++   C R     A
Sbjct: 537 VANPVIHNALLHAFYREGMITEAEHFRQY--MSRMNISFDSVSFNRIIDSYCHRGNIVGA 594

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQ---GLLEMDFKLNDFQLAPYTIW 641
           FS++   +R     +  + +++   L Q G +  A Q    LL++ F +++     +   
Sbjct: 595 FSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDE---KTFNAL 651

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           L+G+C+ G + EAL++   +++   +    +   L+ G C++G +  A+ +    L+ G 
Sbjct: 652 LLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGV 711

Query: 702 I 702
           +
Sbjct: 712 V 712



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 148/658 (22%), Positives = 265/658 (40%), Gaps = 113/658 (17%)

Query: 182 GKTE--VAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSP 236
           GK++  +A+K+L  + +R G+    + Y + +  L Q     +A  +   +  +G  C+ 
Sbjct: 80  GKSDGKLALKILSSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTA 139

Query: 237 DF---------------VAYNALLNGFCKLRRV-DEALALLRSFEKD-GFVPRLGSYSCL 279
            F               V +  L+  + K R+V D A+A+L  F  D GF     S + +
Sbjct: 140 IFTSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVL--FMDDCGFKASPVSCNTI 197

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++ L         + + R+    K    V    +++  L   G+ + A  +L  M+   I
Sbjct: 198 LNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHI 257

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQ 398
             ++  YN ++  +   G    A  + +E  +RDS+  + +T+ I+I  +CR      A 
Sbjct: 258 -SNSVTYNTILHWYVKKGRFKAALCV-LEDMERDSVQADVYTYNIMIDKLCRIKRSTRAF 315

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L  +M K    P    +N LI+G  + G++  A  +F  M           L Q  N V
Sbjct: 316 LLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHM-----------LRQ--NLV 362

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK---------- 508
              A+  TM++ YC    I KA  IL ++  +G +P  +TY++L+NG+CK          
Sbjct: 363 PSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYL 422

Query: 509 -------------------------VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                                    VG I+ A ++ K +   G+ PD +TY  LING+ R
Sbjct: 423 MEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCR 482

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL------------- 590
           + +  +   I  +M ++G  P+  +Y +L+ + C+      A   ++             
Sbjct: 483 MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVI 542

Query: 591 -----------------QYLRDISGRDDESMKS------IEEFLQKGEVENAIQGLLEMD 627
                            ++ R    R + S  S      I+ +  +G +  A     +M 
Sbjct: 543 HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMV 602

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  Y   L GLCQ G + +A    S L++    +   +   L+ G+C+ G LD
Sbjct: 603 RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLD 662

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            A+D+    +KN  +  P +  Y +    F +  K + A  +L  M   G   D   Y
Sbjct: 663 EALDLCEKMIKNNCL--PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAY 718



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 19/399 (4%)

Query: 96   VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI----YNAVLNIAFRKQLF 149
            VV D   +  L++G    G  + A   F    E  C+  +Y     YN+++N   + +  
Sbjct: 711  VVPDTVAYTCLLNGLINEGQVKAASYVF---HEIICKEGLYADCIAYNSLMNGYLKSRNV 767

Query: 150  LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
                 +  +M +    PN  ++++L++G  K G+   ++ +   M ++GI P+  TY ++
Sbjct: 768  NTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 827

Query: 210  ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
            I GL +    D A +   KM   G  PD + ++ L+  F +  ++  AL +    +    
Sbjct: 828  ILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHM 887

Query: 270  VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
             P   ++S +I+GL R    D ++    +M +  ++P+   Y  ++      G++  A +
Sbjct: 888  SPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 947

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  +M+  GIVP     +++I+G C  G L++A  +   + +   +P   TFT L+  +C
Sbjct: 948  LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLC 1007

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPT 446
            +   + DA  L   ME       V  +N LI GLCK   +  A  L+ +M+   +  N T
Sbjct: 1008 KESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNIT 1067

Query: 447  LFLRLSQG---GNRVHDKASLQTMVEQYCTAGLIHKAYK 482
             ++ L+       RV +   L   +E+    GLI  AYK
Sbjct: 1068 TYITLTGAMYSTGRVQNGEELLEDIEE---RGLI-PAYK 1102


>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 260/581 (44%), Gaps = 63/581 (10%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAK------RKRLRSFASNSAVISMLLKPNGFD-- 80
           LS   V S++    NP    RF+IW +       +K+L        V+   L   G D  
Sbjct: 120 LSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQ-----GVLVRNLHREGPDRP 174

Query: 81  --LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
             L    L +++   + V  ++  +L   + ++G     +E FG++      P   +YNA
Sbjct: 175 VLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNA 234

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           V++   +     LA   + +M   NC+P+  T+++LI+G+ + G  + A++++ +M   G
Sbjct: 235 VMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLG 294

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN FTYTI+I G     RA EA+++   MK+    P+     +L++G  +    D+A 
Sbjct: 295 YFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAF 354

Query: 259 ALLRSF-----------------------------------EKDGFVPRLGSYSCLIDGL 283
            LL  F                                    K+G+VP   +++  +  +
Sbjct: 355 ELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACV 414

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +          +    +  ++P    Y  +I  L +AGK++   + +  +   G++ + 
Sbjct: 415 LKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNI 474

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y YN +I   C    +D+A  +  ++  R   PN  T+  LI G CRNG +D AQ+L   
Sbjct: 475 YSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEM 534

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           + ++   P +  FN+LIDGLC+A + E A   F +M     P              +  +
Sbjct: 535 LLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPP-------------NVIT 581

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  +C  G + ++  +L Q+   G  PD  ++N+LI G+        A KLF  + 
Sbjct: 582 YNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSML 641

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             G++PD+ TYG LI  L +  R + A  IF  M +NGCTP
Sbjct: 642 RLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 682



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/557 (23%), Positives = 235/557 (42%), Gaps = 31/557 (5%)

Query: 173 LLINGLSKSGKTE---VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           +L+  L + G      +++ +L ++ + G+   +    I+     ++  A+    +F ++
Sbjct: 161 VLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQI 220

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G +P    YNA+++   K   +D A    +       VP   +Y+ LI G+ R    
Sbjct: 221 GLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVV 280

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           DEA    ++M      P+V  Y ++I G   A +  +A K+L  M+ER +VP+     +L
Sbjct: 281 DEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSL 340

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG-----MCRNGMVDDAQKLFNKM 404
           + G       D+A  L +E  +R         T L+C      +  N M  +A     K 
Sbjct: 341 VHGVFRCIAPDKAFELLLEFVERK-----QGITQLVCDNILYCLSNNSMASEAVMFLIKT 395

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            K G  PS   FN  +  + K            K+++    T+F    Q G +      L
Sbjct: 396 GKEGYVPSSSTFNITLACVLK------------KLDLKVTCTVFDNCVQSGVKPGFSTYL 443

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++E    AG +    + + +L   G + +I +YN +I+  CK  +++ A ++F++L  
Sbjct: 444 -TLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHN 502

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G+ P+ VTY TLI G  R    + A  +   + ++   P    + SL+   C+  K   
Sbjct: 503 RGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHEN 562

Query: 585 AFSLWLQYLR-DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI--W 641
           AF  + + +  D+          I  F   G+V  +   L +M  KL+  Q   ++    
Sbjct: 563 AFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQM--KLHGIQPDTFSFNAL 620

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G     + ++A  +F  ++         +   LI  LCK G  D A ++FL   +NG 
Sbjct: 621 IQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGC 680

Query: 702 ILRPRVCNYLLRSLLFS 718
                 C+    +L  S
Sbjct: 681 TPDSYTCSLFSDTLAHS 697



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 136/295 (46%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           F I   K   + S ++ +  ++ +LK     +     D      V      +  LI   Y
Sbjct: 391 FLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALY 450

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K G  E       ++       ++Y YN V++   + +    A  ++ ++      PNIV
Sbjct: 451 KAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIV 510

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ LI G  ++G  + A ++L+ + +    P+ FT+  +I GLCQ ++ + A+  F +M
Sbjct: 511 TYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 570

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
            +    P+ + YN L+  FC +  V  +  LLR  +  G  P   S++ LI G     R+
Sbjct: 571 VEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRF 630

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
            +A   +  M    I+PD   YG +I+ L ++G+   A ++   M+E G  PD+Y
Sbjct: 631 QKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSY 685



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           F +  T+   + K    ++G R+         + +  S + VI  L K    D   +   
Sbjct: 439 FSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFR 498

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +L +  +S     +  LI G+ + G+ +KA E    + E   +PD++ +N++++   +  
Sbjct: 499 DLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAH 558

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A   + EMV+ +  PN++T+++LI      G    +  +L +M   GI P+ F++ 
Sbjct: 559 KHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFN 618

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G    NR  +A +LF  M   G  PD   Y AL+   CK  R D+A  +  S +++
Sbjct: 619 ALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKEN 678

Query: 268 GFVPRLGSYSC 278
           G  P   SY+C
Sbjct: 679 GCTP--DSYTC 687



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  +  +GD  ++     +MK    QPD + +NA++     K  F  A  ++  M
Sbjct: 581 TYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSM 640

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           ++L   P+  T+  LI  L KSG+ + A ++   M + G  P+ +T ++
Sbjct: 641 LRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 689


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 263/572 (45%), Gaps = 60/572 (10%)

Query: 19   EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPN 77
            E ALE L+  +    V  V+       V  +FF WAAKR+      S   A+I  L    
Sbjct: 1068 EKALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVE 1127

Query: 78   GFDLYWQTLDELRSGNVSVV-----SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
             +   W+ + E+    + VV     SDV  +L  G  K+    +A+  F ++K   CQP 
Sbjct: 1128 QYGEMWKMIQEMVRNPICVVTPTELSDVVRML--GNAKM--VRQAITIFYQIKTRKCQPI 1183

Query: 133  VYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
               YN+++ +   +  +     +Y EM  + +C P+ VT+S LI+   K G+ + AI++L
Sbjct: 1184 AQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLL 1243

Query: 192  DEMTQRGILPNK-----------------------------------FTYTIVISGLCQI 216
            +EM + G+ P                                     FTYT +I GL + 
Sbjct: 1244 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 1303

Query: 217  NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             R DEAY  F +M+  GC PD V  N ++N   K  R+D+A+ L +  E    +P + +Y
Sbjct: 1304 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTY 1363

Query: 277  SCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + +I  LF +K R  E  +W+ +M E  I P    Y ++I G  +  +++ AM LL +M 
Sbjct: 1364 NTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMD 1423

Query: 336  ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            E+G  P    Y +LI         D A  L  E+ +     +   + ++I  + + G +D
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLD 1483

Query: 396  DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            DA  +F++M K GC P V  +NAL+ GL + G L++A     +M             Q  
Sbjct: 1484 DAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM-------------QEH 1530

Query: 456  NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
              + D  S   ++      G  H+A ++L  + +S   PD+++YN+++      G    A
Sbjct: 1531 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 1590

Query: 516  LKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             KL KE+   G   D +TY +++  + +VD E
Sbjct: 1591 SKLMKEMNTLGFEYDLITYSSILEAIGKVDHE 1622



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 211/477 (44%), Gaps = 28/477 (5%)

Query: 277  SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
            S ++  L  AK   +A   + ++   K +P    Y  MI  L   G+ +   +L ++M  
Sbjct: 1153 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 1212

Query: 337  RG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G   PDT  Y+ALI  FC LG  D A  L  E+ +    P T  +T+LI    +     
Sbjct: 1213 EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAH 1272

Query: 396  DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
             A  LF +M    C P V  +  LI GL KAG +++A   F +M+            + G
Sbjct: 1273 GALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ------------REG 1320

Query: 456  NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNING 514
             R  D   +  M+     AG +  A K+  ++     +P ++TYN++I   F      + 
Sbjct: 1321 CRP-DTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASE 1379

Query: 515  ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
                F+ ++  G+ P S TY  LI+G  + +R E A  +  +M + G  P PA Y SL+ 
Sbjct: 1380 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 1439

Query: 575  WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
               + +++ LA  L+ Q L++  G     + +  I+   + G +++AI    EM    N 
Sbjct: 1440 ALGKAKRYDLACELF-QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM----NK 1494

Query: 633  FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
               AP    Y   + GL + G + EAL+    + E   I    S   +++GL K G    
Sbjct: 1495 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 1554

Query: 689  AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            AM++ L  +K   + RP V +Y       S       A  L+  M ++G++ D   Y
Sbjct: 1555 AMEM-LSNMKQSTV-RPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITY 1609



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 210/496 (42%), Gaps = 27/496 (5%)

Query: 97   VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
            V D  F+ I   +K G D EKALE    M   D      +    + +  + Q F  A   
Sbjct: 1049 VLDERFIRILKIFKWGPDAEKALEVL--MLRVDHWLVREVMKTDVGVNVKMQFFRWAAK- 1105

Query: 156  YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI---LPNKFTYTIVISG 212
                 + N   +  T+  LI+ L    +     KM+ EM +  I    P + +  + + G
Sbjct: 1106 -----RRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLG 1160

Query: 213  LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-P 271
              ++ R  +A  +F ++K   C P   AYN+++       + ++   L      +G   P
Sbjct: 1161 NAKMVR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 1218

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               +YS LI    +  R D A     +M E  ++P   +Y ++I    +      A+ L 
Sbjct: 1219 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 1278

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             +MR +   PD + Y  LI+G    G +D+A     E+ +    P+T     +I  + + 
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 1338

Query: 392  GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            G +DDA KLF +ME   C PSV  +N +I  L ++           K    + P+ F R+
Sbjct: 1339 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFES-----------KSRASEVPSWFERM 1387

Query: 452  SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
             + G       +   +++ +C    + KA  +L ++ E G  P    Y SLI+   K   
Sbjct: 1388 KESGISP-SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446

Query: 512  INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
             + A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GC P    Y +
Sbjct: 1447 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 1506

Query: 572  LMTWSCRRRKFSLAFS 587
            LM+   R      A S
Sbjct: 1507 LMSGLARTGMLDEALS 1522


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 180/723 (24%), Positives = 316/723 (43%), Gaps = 92/723 (12%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG 78
           E  L  LL  L    V +V+    + +V   FF WA ++ R     S+  V+        
Sbjct: 155 EGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWADRQWRY----SHHPVV-------- 202

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM--KEFDCQPDVYIY 136
              Y+  LD L                    K   C+ A      M  +  +C P+ + Y
Sbjct: 203 ---YYTMLDVLS-------------------KTKLCQGARRVLRLMTRRGIECPPEAFGY 240

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             V+    R      AL V   M K    P++   +  I  L K GK E A+K L+ M  
Sbjct: 241 --VMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQV 298

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            GI P+  TY  +I G C +NR ++A  L   +   GC PD V+Y  ++   CK ++++E
Sbjct: 299 TGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEE 358

Query: 257 ALALLRSFE-KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
              L+         +P   +Y+ LI  L +    D+A A+ ++  ++    D V Y  ++
Sbjct: 359 VKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIV 418

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
               + G++ +A  L+ DM  RG  PD   Y A++ GFC LG +D+A+ +  +++K    
Sbjct: 419 HSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCK 478

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PNT ++T L+ G+C +G   +A+++ N  E+    P+   + A++ GL + G+L +A  L
Sbjct: 479 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538

Query: 436 FYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             +M E G  PT                 +  +++  C    + +A K L +    G   
Sbjct: 539 TREMVEKGFFPT--------------PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAI 584

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +++ + ++I+GFC++G++  AL +  ++ L G  PD+VTY  L + L +  R ++A  + 
Sbjct: 585 NVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELI 644

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M   G  P+P  Y+S++            +S W        GR D+ +  +E+ L++ 
Sbjct: 645 VKMLSKGLDPTPVTYRSVIH----------RYSQW--------GRVDDMLNLLEKMLKRQ 686

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
                   ++E   KL DF               G ++EA  +   ++   + V   +C 
Sbjct: 687 PFRTVYNQVIE---KLCDF---------------GNLEEAEKLLGKVLRTASKVDANTCH 728

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            L+    K+G    A  V     +       ++C  + + L+   D K V A +L+ R  
Sbjct: 729 VLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVL--DGKLVEADNLMLRFV 786

Query: 735 SVG 737
             G
Sbjct: 787 ERG 789



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 33/273 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G  + G   +A +   +M E    P     N ++    + Q  + A     E 
Sbjct: 518 TYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 577

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   C  N+V F+ +I+G  + G  E A+ +LD+M   G  P+  TYT +   L +  R 
Sbjct: 578 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRL 637

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK--------DGFVP 271
           DEA  L +KM   G  P  V Y ++++ + +  RVD+ L LL    K        +  + 
Sbjct: 638 DEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIE 697

Query: 272 RLGSYSCLIDG-------LFRAKRYD------------------EAYAWYRKMFEEKIEP 306
           +L  +  L +        L  A + D                   AY    +MF   + P
Sbjct: 698 KLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTP 757

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           D+ L   + + L   GK+ +A  L+    ERGI
Sbjct: 758 DLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 171/648 (26%), Positives = 288/648 (44%), Gaps = 26/648 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++G++  GD + ALE   +MK    +P+V  Y A++    + +    A ++Y  MV+  
Sbjct: 228 LVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LP++VT S L++GL + G+   A  +  EM + G+ PN  TY  +I  L +  R  E+ 
Sbjct: 288 VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M   G   D V Y AL++   K  +++EA  +LR  + D   P   +Y+ L+D  
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            RA   D A     +M E+ + P+VV +  +I GL + G +  A   +  M++ GI P+ 
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  LI GF      + A  +  ++       N      L+ G+ +NG ++ A+ LF  
Sbjct: 468 VTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKD 527

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKA 462
           M++ G       +  L+DGL K G +  A  +  + ME   +P              D  
Sbjct: 528 MDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSP--------------DAV 573

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                +   CT G   +A   L ++  +G  PD  TYN++I   C+ G  + ALKL KE+
Sbjct: 574 VYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM 633

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +   ++P+ +TY TL+ GL      + A  +  +M   G  P+   ++ ++      R+ 
Sbjct: 634 KRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRP 693

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTI- 640
            +   +    +      D     ++   L   G   NA   L EM  +     +AP TI 
Sbjct: 694 DVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTR----GIAPDTIT 749

Query: 641 ---WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
               ++G C+   +  A  I++ ++         +   L+ GL   G +  A D  L  +
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA-DTVLSDM 808

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           K    L P    Y +    ++K + KV A  L C M S G+   A  Y
Sbjct: 809 KK-VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 225/464 (48%), Gaps = 13/464 (2%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           DV  +NA+++   + Q    ALAV   M       ++V ++ L+ G   SG  + A++++
Sbjct: 186 DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVV 245

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           + M   G+ PN  TYT +I   C+    DEA+ L+  M  SG  PD V  +AL++G C+ 
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            +  EA AL R  +K G  P   +Y  LID L +A+R  E+     +M    +  D+V+Y
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             ++  L + GK+++A  +L   +   I P+   Y  L+   C  G +D A  + +++ +
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +  +PN  TF+ +I G+ + G +  A     KM+ +G  P+V  +  LIDG  K  + ++
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF-QGQE 484

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A L  Y+        +     +  N V D     ++V      G I  A  +   + E G
Sbjct: 485 AALDVYR-------DMLHEGVEANNFVVD-----SLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            L D + Y +L++G  K GN+  A K+ +EL  K L PD+V Y   IN L  + +  +A 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
               +M   G  P  A Y +++   CR  K S A  L  +  R+
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRN 636



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 257/606 (42%), Gaps = 92/606 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   + ++ +++  V      +  LI  Y K    ++A   +  M      PDV   +A+
Sbjct: 239 DAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSAL 298

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           ++   R   F  A A++ EM K+   PN VT+  LI+ L+K+ +   ++ +L EM  RG+
Sbjct: 299 VDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGV 358

Query: 200 L-----------------------------------PNKFTYTIVISGLCQINRADEAYR 224
           +                                   PN  TYT+++   C+    D A +
Sbjct: 359 VMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQ 418

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++    P+ V +++++NG  K   + +A   +R  +  G  P + +Y  LIDG F
Sbjct: 419 VLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFF 478

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV---- 340
           + +  + A   YR M  E +E +  +   ++ GL + G ++ A  L  DM ERG++    
Sbjct: 479 KFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHV 538

Query: 341 -------------------------------PDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                          PD   YN  I   C LG   +A+S   E+
Sbjct: 539 NYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL  +M++    P++  +  L+ GL +AG +
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658

Query: 430 EKANLLFYKM-EIGKNPTLF-----LRLSQGGNR------VH----------DKASLQTM 467
           +KA  L  +M   G  PT       L+   G  R      +H          D     T+
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL 718

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V   C  G+   A  +L ++   G  PD IT+N+LI G CK  +++ A  ++ ++  +GL
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+   R  +A  +   M + G  P+   Y  L+T   ++     A  
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALR 838

Query: 588 LWLQYL 593
           L+ + +
Sbjct: 839 LYCEMV 844



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 246/562 (43%), Gaps = 58/562 (10%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F + + ++    +    D   Q L ++   +V      F  +I+G  K G   KA +  
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYM 455

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            KMK+    P+V  Y  +++  F+ Q    AL VY +M+      N      L+NGL K+
Sbjct: 456 RKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKN 515

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E A  +  +M +RG+L +   YT ++ GL +      A+++  ++ +   SPD V Y
Sbjct: 516 GNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVY 575

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N  +N  C L +  EA + L+     G  P   +Y+ +I    R  +  +A    ++M  
Sbjct: 576 NVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP-------------------- 341
             I+P+++ Y  ++ GL EAG VK A  LL++M   G  P                    
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695

Query: 342 ---------------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
                          D   YN L+   C  G+   A  +  E+  R   P+T TF  LI 
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
           G C++  +D+A  ++ +M   G  P++  FN L+ GL  AG + +A+ +   M ++G  P
Sbjct: 756 GHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEP 815

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                     N  +D      +V  Y       +A ++  ++   G +P   TYNSL++ 
Sbjct: 816 N---------NLTYD-----ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           F K G +N A +LF E++ +G+   S TY  L+NG  ++    +   +   M + G  PS
Sbjct: 862 FAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPS 921

Query: 566 PAVYKSL--------MTWSCRR 579
                S+        MT   RR
Sbjct: 922 KGTISSMSRAFSRPGMTGEARR 943



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 271/584 (46%), Gaps = 36/584 (6%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           + V++++ +  LS+ G   +A  +L EM +RG+  +  T +  + GLC+     EA  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 227 -LKMKDSGCSP-DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            + ++  G    D V +NAL++G+CK++ +  ALA++      G    +  Y+ L+ G F
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
            +   D A     +M  + +EP+VV Y  +I    +   + +A  L   M   G++PD  
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             +AL+ G C  G   +A +L  E+ K    PN  T+  LI  + +     ++  L  +M
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
              G    + M+ AL+D L K G++E+A  +             LR +Q  N   +  + 
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDV-------------LRHAQSDNITPNFVTY 400

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +V+ +C AG I  A ++L+Q+ E   +P+++T++S+ING  K G +  A    ++++ 
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKD 460

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+ P+ VTYGTLI+G  +   +E A  ++  M   G   +  V  SL+    +      
Sbjct: 461 SGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEG 520

Query: 585 AFSLWLQYLRDISGR----DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--- 637
           A +L+    +D+  R    D  +  ++ + L K      +    ++  +L +  L+P   
Sbjct: 521 AEALF----KDMDERGLLLDHVNYTTLMDGLFK---TGNMPAAFKVGQELMEKNLSPDAV 573

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y +++  LC  G+  EA +    +          +   +I   C+ G    A+ +    
Sbjct: 574 VYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM 633

Query: 697 LKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
            +N   ++P +  Y  L+  LL +   KK  A  LL  M S G+
Sbjct: 634 KRNS--IKPNLITYTTLVVGLLEAGVVKK--AKFLLNEMASAGF 673



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 197/433 (45%), Gaps = 15/433 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R  L    + + ++  L K       ++   EL   N+S  + V+ V I+    +G   
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A     +M+    +PD   YN ++    R+     AL +  EM + +  PN++T++ L+
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL ++G  + A  +L+EM   G  P   T+  V+       R D    +   M  +G  
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            D   YN L++  C       A  +L      G  P   +++ LI G  ++   D A+A 
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           Y +M  + + P++  +  ++ GL  AG++ +A  +LSDM++ G+ P+   Y+ L+ G+  
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAK 829

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
                +A  L  E+  +  +P   T+  L+    + GM++ A++LF++M++ G   +   
Sbjct: 830 KSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSST 889

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           ++ L++G  K     +  +L   M E+G  P+              K ++ +M   +   
Sbjct: 890 YDILLNGWSKLRNGIEVRILLKDMKELGFKPS--------------KGTISSMSRAFSRP 935

Query: 475 GLIHKAYKILMQL 487
           G+  +A ++L  L
Sbjct: 936 GMTGEARRLLKTL 948



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 244/566 (43%), Gaps = 74/566 (13%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLR-----------------------SFEKDG---FV 270
           D +  N+++  +C LR +  AL+LLR                       +  + G     
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 271 PRLGSYSC-------------LIDGLFRAKRYDEAYAWYRKMFEEK-IEP-DVVLYGVMI 315
           P + S  C              + GL R     EA A    +   + I+  DVV +  +I
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G  +   +  A+ ++  M  +G+  D   YN+L+ GF   G  D A  + VE  K D +
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEV-VERMKADGV 253

Query: 376 -PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN  T+T LI   C+   +D+A  L+  M ++G  P V   +AL+DGLC+ G+  +A  
Sbjct: 254 EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYA 313

Query: 435 LFYKME-IGKNP------TLFLRLSQG--GNR-------------VHDKASLQTMVEQYC 472
           LF +M+ IG  P      TL   L++   G+              V D      ++++  
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373

Query: 473 TAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
             G I +A  +L   A+S N+ P+ +TY  L++  C+ GNI+GA ++  +++ K + P+ 
Sbjct: 374 KEGKIEEAKDVLRH-AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNV 432

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VT+ ++INGL +      A     +M  +G  P+   Y +L+    + +    A  ++  
Sbjct: 433 VTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRD 492

Query: 592 YLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            L +    ++  + S+   L+K G +E A     +MD +        YT  + GL + G 
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552

Query: 651 VKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           +  A  +   L+E    ++P + V    I+ LC  G    A   FL  ++N   L P   
Sbjct: 553 MPAAFKVGQELMEKN--LSPDAVVYNVFINCLCTLGKFSEAKS-FLKEMRNTG-LEPDQA 608

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMK 734
            Y        ++ K   A  LL  MK
Sbjct: 609 TYNTMIAARCREGKTSKALKLLKEMK 634



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 143/321 (44%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E++  ++      +  L+ G  + G  +KA     +M      P    +  VL     
Sbjct: 630 LKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSG 689

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   + L ++  M+      +I  ++ L++ L   G    A  +LDEM  RGI P+  T
Sbjct: 690 SRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTIT 749

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  +I G C+ +  D A+ ++ +M   G SP+   +N LL G     R+ EA  +L   +
Sbjct: 750 FNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMK 809

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P   +Y  L+ G  +     EA   Y +M  +   P    Y  ++   ++AG + 
Sbjct: 810 KVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMN 869

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +L S+M+ RG++  +  Y+ L+ G+  L    + R L  ++ +    P+  T + + 
Sbjct: 870 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMS 929

Query: 386 CGMCRNGMVDDAQKLFNKMEK 406
               R GM  +A++L   + K
Sbjct: 930 RAFSRPGMTGEARRLLKTLFK 950


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 216/428 (50%), Gaps = 15/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A+++EMV    LP+IV F+ L+   +   + E  I    +M   GI  + +++TI+I 
Sbjct: 55  AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ +R   A  +  KM   G  P  V + +LL+GFC + R+ +A +L+    K G+ P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ LIDGL +    + A     +M ++ +  DVV Y  ++ GL  +G+  DA ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM +R I PD   + ALI  F   G LD+A+ L  E+ +    PN  T+  +I G+C +
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G + DA+K F+ M   GCFP+V  +N LI G CK   +++   LF +M   G N  +F  
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF-- 352

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  T++  YC  G +  A  I   +      PDIIT+  L++G C  G
Sbjct: 353 ------------TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  AL  F +++        V Y  +I+GL + D+ E A+ +F ++P  G  P    Y 
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 571 SLMTWSCR 578
            ++   C+
Sbjct: 461 IMILGLCK 468



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 184/405 (45%), Gaps = 13/405 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM+ +    D+Y +  +++   R      AL+V  +M+KL   P+IVTF  L++G     
Sbjct: 96  KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           +   A  ++  M + G  PN   Y  +I GLC+    + A  L  +M+  G   D V YN
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LL G C   R  +A  +LR   K    P + +++ LID   +    DEA   Y++M + 
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            ++P+ V Y  +I GL   G++ DA K    M  +G  P+   YN LI GFC   ++D+ 
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L   +       +  T+  LI G C+ G +  A  +F  M      P +     L+ G
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  GE+E A + F  M             +   +     +   M+   C A  + KA++
Sbjct: 396 LCVNGEIESALVKFDDM-------------RESEKYIGIVAYNIMIHGLCKADKVEKAWE 442

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +L   G  PD  TY  +I G CK G    A +L + ++ +G+
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 191/392 (48%), Gaps = 15/392 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  + +      AL   GKM +   +P +  + ++L+          A ++   MV
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    PN+V ++ LI+GL K+G+  +A+++L+EM ++G+  +  TY  +++GLC   R  
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+   M     +PD V + AL++ F K   +DEA  L +   +    P   +Y+ +I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +GL    R  +A   +  M  +   P+VV Y  +I G  +   V + MKL   M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D + YN LI G+C +G L  A  +   +  R   P+  T  IL+ G+C NG ++ A   
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
           F+ M ++  +  +  +N +I GLCKA ++EKA  LF ++ + G  P              
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP-------------- 454

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           D  +   M+   C  G   +A +++ ++ E G
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G  K G+   ALE   +M++     DV  YN +L        +  A  +  +M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K +  P++VTF+ LI+   K G  + A ++  EM Q  + PN  TY  +I+GLC   R 
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A + F  M   GC P+ V YN L++GFCK R VDE + L +    +GF   + +Y+ L
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +  +   A   +  M   ++ PD++ + +++ GL   G+++ A+    DMRE   
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK 417

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
                 YN +I G C    +++A  L   +      P+  T+TI+I G+C+NG   +A +
Sbjct: 418 YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 477

Query: 400 LFNKMEKAG 408
           L  +M++ G
Sbjct: 478 LIRRMKEEG 486



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 214/457 (46%), Gaps = 16/457 (3%)

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G   + R+++A+A + +M   +  P +V +  ++   +   + +  +     M   GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D Y +  LI  FC    L  A S+  ++ K    P+  TF  L+ G C    + DA  L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
             M K+G  P+V ++N LIDGLCK GEL  A  L  +ME         +   G     D 
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME---------KKGLGA----DV 211

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++   C +G    A ++L  + +    PD++T+ +LI+ F K GN++ A +L+KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +    + P++VTY ++INGL    R  DA + F  M   GC P+   Y +L++  C+ R 
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
                 L+ +   +    D  +  + I  + Q G++  A+     M  +     +  + I
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            L GLC +G+++ AL  F  + E +  +   +   +IHGLCK   ++ A ++F      G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
             ++P    Y +  L   K+  +  A  L+ RMK  G
Sbjct: 452 --VKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 35/309 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    ++  + L+E+    +      +  L++G    G    A      M +
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  + A++++  ++     A  +Y EM++ +  PN VT++ +INGL   G+   
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K  D M  +G  PN  TY  +ISG C+    DE  +LF +M   G + D   YN L++
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359

Query: 247 GFCKLRRVDEAL-------------------ALLRSFEKDGFVPR--------------- 272
           G+C++ ++  AL                    LL     +G +                 
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419

Query: 273 -LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ +I GL +A + ++A+  + ++  E ++PD   Y +MI GL + G  ++A +L+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479

Query: 332 SDMRERGIV 340
             M+E GI+
Sbjct: 480 RRMKEEGII 488



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 191/459 (41%), Gaps = 70/459 (15%)

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +  SD RE+           L  GF      + A +L  E+     LP+   FT L+ 
Sbjct: 31  AARAFSDYREK-----------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLT 79

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP 445
                   +       KME  G    +  F  LI   C+   L  A ++L   M++G  P
Sbjct: 80  ATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP 139

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               +  +++  +C    I  A+ +++ + +SG  P+++ YN+LI+G
Sbjct: 140 SI--------------VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK G +N AL+L  E++ KGL  D VTY TL+ GL    R  DA R+   M +    P 
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIE 608
              + +L+    ++     A  L+ + ++                  + GR  ++ K+ +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 609 EFLQKGEVENA------IQGLLE---MDFKLNDFQ----------LAPYTIWLIGLCQDG 649
               KG   N       I G  +   +D  +  FQ          +  Y   + G CQ G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 650 QVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +++ AL+IF  +V  +  VTP     C+ L+HGLC  G ++ A+  F    ++   +   
Sbjct: 366 KLRVALDIFCWMVSRR--VTPDIITHCI-LLHGLCVNGEIESALVKFDDMRESEKYIGIV 422

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N ++  L   K +K   A+ L CR+   G   DA  Y
Sbjct: 423 AYNIMIHGL--CKADKVEKAWELFCRLPVEGVKPDARTY 459



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 90/173 (52%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LISG+ K    ++ ++ F +M       D++ YN +++   +     +AL ++  MV  
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+I+T  +L++GL  +G+ E A+   D+M +         Y I+I GLC+ ++ ++A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           + LF ++   G  PD   Y  ++ G CK     EA  L+R  +++G + ++ +
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 242/513 (47%), Gaps = 14/513 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF ++      P +  +  +L    + + +   L++  +M      PN+ T ++L
Sbjct: 47  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 106

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+T +I GLC   +  EA  LF KM D G 
Sbjct: 107 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 166

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V Y  L+NG CK+     A+ LLRS E+    P +  Y+ +ID L + ++  EA+ 
Sbjct: 167 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 226

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + I PD+  Y  ++  L    + K    LL+ M    I+PD   ++ ++   C
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A  +   + +R   P+  T+T L+ G C    +D+A K+F+ M + G  P V 
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  LI+G CK  +++KA  LF +M                  + D  +  T++   C  
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEM-------------CRKEWIPDTKTYNTLMYGLCHV 393

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A  +  ++   G +PD++TY+ L++  CK  ++  A+ L K ++   L PD   Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             +I+G+ R    E A  +F  +   G  PS   Y  ++   C+R   + A  L+++   
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513

Query: 595 DISGRDDESMKSIEE-FLQKGEVENAIQGLLEM 626
           +    D  +  +I   FLQ  E   AIQ L EM
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 15/460 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +     A     K+ +   QPD   +  ++     +     AL ++ +M+  
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN+VT+  LINGL K G T  AI++L  M Q    P+   YT +I  LC+  +  EA
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF +M   G SPD   Y +L++  C L        LL        +P +  +S ++D 
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA+     M +  +EPDVV Y  ++ G     ++ +A+K+   M  +G  PD
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  LI G+C +  +D+A  L  E+ +++ +P+T T+  L+ G+C  G + DA  LF+
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFH 404

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDK 461
           +M   G  P +  ++ L+D LCK   LE+A  L   +E    NP              D 
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNP--------------DI 450

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                +++  C AG +  A  +   L+  G  P + TYN +I+G CK G +N A KLF E
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +      PD  TY T+  G  + +    A ++  +M   G
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 244/531 (45%), Gaps = 16/531 (3%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  D+A   F ++      P  V +  LL    K++     L+L    +  G  P + 
Sbjct: 42  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVY 101

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + LI+      R   A++   K+ +   +PD   +  +IRGL   GK+ +A+ L   M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  P+   Y  LI G C +G    A  L   + + +  P+   +T +I  +C++  V
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            +A  LF++M   G  P +  + +L+  LC   E +    L  +M   K           
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI---------- 271

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              + D     T+V+  C  G + +A++I+  + + G  PD++TY +L++G C    ++ 
Sbjct: 272 ---LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDE 328

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+K+F  +  KG  PD ++Y TLING  ++ + + A  +F +M +    P    Y +LM 
Sbjct: 329 AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMY 388

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKLNDF 633
             C   +   A +L+ + +      D  +   + + L K   +E A+  L  ++    + 
Sbjct: 389 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNP 448

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +  Y I + G+C+ G+++ A ++FS L       +  +   +IHGLCKRG L+ A  +F
Sbjct: 449 DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
           +    +G    P  C Y   +  F ++N+ + A  LL  M + G+  D+C 
Sbjct: 509 MEM--DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCF 557



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 180/354 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  +  GN      ++  +I    K     +A   F +M      PD++ Y ++++    
Sbjct: 193 LRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCN 252

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     +  +MV    LP++V FS +++ L K GK   A +++D M QRG+ P+  T
Sbjct: 253 LCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVT 312

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT ++ G C  +  DEA ++F  M   G +PD ++Y  L+NG+CK+ ++D+A+ L     
Sbjct: 313 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           +  ++P   +Y+ L+ GL    R  +A A + +M      PD+V Y +++  L +   ++
Sbjct: 373 RKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +AM LL  +    + PD   YN +I G C  G L+ AR L   +  +   P+  T+ I+I
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            G+C+ G++++A KLF +M+   C P    +N +  G  +  E  +A  L  +M
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 1/280 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S V+  L K        + +D +    V      +  L+ G+    + ++A++ F  M  
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  Y  ++N   +      A+ ++ EM +   +P+  T++ L+ GL   G+ + 
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  EM  RG +P+  TY+I++  LC+    +EA  L   ++ S  +PD   YN +++
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+   ++ A  L  +    G  P + +Y+ +I GL +    +EA   + +M      P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           D   Y  + RG  +  +   A++LL +M  RG   D+ C+
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS-CF 557



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 69/142 (48%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R ++    + S ++  L K    +     L  + + N++    V+ ++I G  + G+ E 
Sbjct: 409 RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A + F  +      P V+ YN +++   ++ L   A  ++ EM   +C P+  T++ +  
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 528

Query: 177 GLSKSGKTEVAIKMLDEMTQRG 198
           G  ++ +T  AI++L+EM  RG
Sbjct: 529 GFLQNNETLRAIQLLEEMLARG 550


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 229/475 (48%), Gaps = 13/475 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+  F  +      P V  +N ++    + +   +A+++  +MV     P+I T S+ 
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN     G+   A  +L  + +RG  PN  T T V+ GLC      +A      +   G 
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D V Y  L+NG CK+ R  +A  LL+  E     P +  Y+ +ID   + +   +A  
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            Y K+ +  I+PD++ Y  +IRG    G+  +  +L+ +M  + I P+ Y +N LI  FC
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A+ +   + KR   P+  TF  LI G C +G V +A+KLF+ + + G  P V 
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  LI G CK   +++A  LF +M             +  N V D     ++++  C +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEM-------------RCKNMVLDIVLYSSLIDGLCKS 412

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G I  A+++   +   G  P++ITYN LI+ FCK+ +I+  ++LFK +  KGL P  +TY
Sbjct: 413 GRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTY 472

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             LING  +  R  +A  +   M      P    Y SL    C+  + S A+ L+
Sbjct: 473 NILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 527



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 233/483 (48%), Gaps = 13/483 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +I    K+  C  A+    +M      P ++  +  +N          A +V   ++
Sbjct: 87  FNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVL 146

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    PN +T + ++ GL  +G+ + A+   D +  +G+L ++  Y  +I+GLC+I R+ 
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A++L  +M+     P+ V YN +++ FCK     +A  L       G  P + +Y+ LI
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G  R  ++ E      +M  + I P+V  + V+I      GK+ +A  + + M +RG  
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   +N LI G C  G + +AR L   +++R  LP+  ++TILI G C+   +D+A  L
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSL 386

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           FN+M        + ++++LIDGLCK+G +  A  LF  +     P              +
Sbjct: 387 FNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP-------------N 433

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   +++ +C    I    ++   +   G  P ++TYN LING+CK   I  A+ L  
Sbjct: 434 VITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLS 493

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +Q K L PDS+TY +L +GL +  R  DA+ +F  M   G     A Y  L+   C+ +
Sbjct: 494 VMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553

Query: 581 KFS 583
             +
Sbjct: 554 DVA 556



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 240/543 (44%), Gaps = 84/543 (15%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  ++ +  LP+++ F+ +I  + K     VAI +L +M  +G+ P+ FT +I I 
Sbjct: 68  AVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI- 126

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                             N +C L  +  A ++L    K G+ P
Sbjct: 127 ----------------------------------NCYCHLGEMGFAFSVLGIVLKRGYQP 152

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              + + ++ GL       +A  ++  +  + +  D V YG +I GL + G+  DA +LL
Sbjct: 153 NNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL 212

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  + + P+   YN +I  FC   L  +AR L ++I      P+  T+T LI G CR 
Sbjct: 213 QEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRT 272

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   + ++L  +M      P+V  FN LID  C+ G++ +A  +F  M + G+ P     
Sbjct: 273 GQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP----- 327

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +  T++  +C  G + +A K+   + E G LPD+ +Y  LI G+CK  
Sbjct: 328 ---------DIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCK 378

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+ A+ LF E++ K +  D V Y +LI+GL +  R   A+ +F  +  +G  P+   Y 
Sbjct: 379 RIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYN 438

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C+              ++DI    D  ++  +    KG     +          
Sbjct: 439 ILIDAFCK--------------IQDI----DMGIELFKLMCGKGLTPTVLT--------- 471

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  Y I + G C+  +++EA+N+ SV+          +   L  GLCK G +  A 
Sbjct: 472 -------YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524

Query: 691 DVF 693
           ++F
Sbjct: 525 ELF 527



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 171/347 (49%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +Q L E+    V     ++ ++I  + K     KA + + K+ +    PD+  Y +++  
Sbjct: 209 FQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRG 268

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R   +     +  EMV  N  PN+ TF++LI+   + GK   A  M + M +RG  P+
Sbjct: 269 FCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPD 328

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  +ISG C      EA +LF  + + G  PD  +Y  L+ G+CK +R+DEA++L  
Sbjct: 329 IVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFN 388

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                  V  +  YS LIDGL ++ R   A+  +  +  +   P+V+ Y ++I    +  
Sbjct: 389 EMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQ 448

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +   ++L   M  +G+ P    YN LI G+C    + +A +L   +  ++  P++ T+ 
Sbjct: 449 DIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYN 508

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            L  G+C++G + DA +LF  M   G    V  +N L+D  CKA ++
Sbjct: 509 SLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 138/338 (40%), Gaps = 53/338 (15%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLS 452
           +DDA  LFN +      PSV  FN +I  + K      A  L  +M   G  P++F    
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIF---- 120

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +L   +  YC  G +  A+ +L  + + G  P+ IT  +++ G C  G +
Sbjct: 121 ----------TLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEV 170

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A+     +  +G+  D V YGTLINGL ++ R  DAF++  +M      P+  +Y  +
Sbjct: 171 QKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMI 230

Query: 573 MTWSCRRRKFSLAFSLWLQYLR-----DI------------SGRDDESMKS--------- 606
           +   C+      A  L+L+ +      DI            +G+  E  +          
Sbjct: 231 IDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNI 290

Query: 607 ----------IEEFLQKGEVENAIQGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEAL 655
                     I+ F +KG++  A QG+  +  K      +  +   + G C  G V EA 
Sbjct: 291 NPNVYTFNVLIDAFCRKGKMIEA-QGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +F  + E   +    S   LI G CK   +D A+ +F
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 64/149 (42%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L K       W+    + +         + +LI  + K+ D +  +E F  M  
Sbjct: 403 SSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCG 462

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P V  YN ++N   + +    A+ +   M   N  P+ +T++ L +GL KSG+   
Sbjct: 463 KGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISD 522

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           A ++   M   G   +  TY +++   C+
Sbjct: 523 AWELFKVMHVGGPPVDVATYNVLLDAFCK 551


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 235/491 (47%), Gaps = 51/491 (10%)

Query: 121 FGKMKEFD---CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            G  KE D    + ++Y  N ++N   RK+  L A +V    +K    PN +TFS LING
Sbjct: 89  LGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLING 148

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
               G+   A+ ++D M +    PN  T   +I+GLC   R  EA  L  +M   GC  +
Sbjct: 149 FCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEAN 208

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + Y  +LN  CK      AL L R  E+      +  YS +ID L +    D+A + + 
Sbjct: 209 EITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFN 268

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M  + I+ DVV Y  +I GL   G+  D  K+L +M  R I+P+   ++ALI  F   G
Sbjct: 269 EMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEG 328

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            L +A+ L  E+  R   P+T T++ LI G C+   + +A ++ + M   GC P++  ++
Sbjct: 329 KLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYS 388

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            LI+  CKA  ++    LF ++            S+G   V D  +  T+V+ +C +G +
Sbjct: 389 ILINSYCKAKRVDNGMRLFCEIS-----------SKG--LVADTVTYNTLVQGFCQSGKL 435

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ-------------- 523
           + A ++  ++   G  P ++TY  L++G C  G +  AL++F+++Q              
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495

Query: 524 ---------------------LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                                +KG++PD +TY  +I GL +     +A  +F +M ++GC
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555

Query: 563 TPSPAVYKSLM 573
            PS   Y  L+
Sbjct: 556 APSDCTYNILI 566



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 217/438 (49%), Gaps = 13/438 (2%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI+G+   G   +A+    +M E   +P+V   N ++N    K     AL +   MV
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K  C  N +T+  ++N + KSG T +A+ +  +M +R I  +   Y+IVI  LC+    D
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  LF +M+  G   D VAY++++ G C   R D+   +LR       +P + ++S LI
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  +  EA   Y +M    I PD + Y  +I G  +  ++ +A ++L  M  +G  
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y+ LI  +C    +D    L  EI  +  + +T T+  L+ G C++G ++ A++L
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M   G  PSV  +  L+DGLC  GEL+KA  +F KM             Q    +  
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM-------------QKSRMILG 488

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 ++   C A  +  A+ +   L+  G  PD++TYN +I G CK G+++ A  LF+
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548

Query: 521 ELQLKGLRPDSVTYGTLI 538
           +++  G  P   TY  LI
Sbjct: 549 KMKEDGCAPSDCTYNILI 566



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 234/474 (49%), Gaps = 13/474 (2%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A++ F  M +    P +  ++ + +   R++ + L L    EM       N+ T +++I
Sbjct: 52  EAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMI 111

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           N   +  K   A  ++    + G  PN  T++ +I+G C   R  EA  L  +M +    
Sbjct: 112 NCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYR 171

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V  N L+NG C   RV EAL L+    K G      +Y  +++ + ++     A   
Sbjct: 172 PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL 231

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +RKM E  I+  VV Y ++I  L + G + DA+ L ++M  +GI  D   Y+++I G C+
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G  D    +  E+  R+ +PN  TF+ LI    + G + +A++L+N+M   G  P    
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +++LIDG CK   L +AN +           L L +S+G     +  +   ++  YC A 
Sbjct: 352 YSSLIDGFCKENRLGEANQM-----------LDLMVSKGCE--PNIVTYSILINSYCKAK 398

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +    ++  +++  G + D +TYN+L+ GFC+ G +N A +LF+E+  +G+ P  VTYG
Sbjct: 399 RVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYG 458

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            L++GL      + A  IF +M ++       +Y  ++   C   K   A+SL+
Sbjct: 459 ILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 261/566 (46%), Gaps = 26/566 (4%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K   AI + + M Q   LP+   ++ + S + +    D       +M  +G   +    N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N FC+ R++  A +++    K GF P   ++S LI+G     R  EA A   +M E 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           K  P+VV    +I GL   G+V +A+ L+  M + G   +   Y  ++   C  G    A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++ +R    +   ++I+I  +C++G +DDA  LFN+ME  G    V  ++++I G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LC  G  +    +  +M IG+N             + +  +   +++ +   G + +A +
Sbjct: 289 LCNDGRWDDGAKMLREM-IGRNI------------IPNVVTFSALIDVFVKEGKLLEAKE 335

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +  ++   G  PD ITY+SLI+GFCK   +  A ++   +  KG  P+ VTY  LIN   
Sbjct: 336 LYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYC 395

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDD 601
           +  R ++  R+F ++   G       Y +L+   C+  K ++A  L+ + + R +     
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                ++     GE++ A++   +M        +  Y I + G+C   +V +A ++F  L
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515

Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
              K +   P  +    +I GLCK+G L  A  +F    ++G    P  C Y  L+R+ L
Sbjct: 516 -SVKGV--KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDG--CAPSDCTYNILIRAHL 570

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
               +  + +  L+  MK  G+  DA
Sbjct: 571 --GGSGVISSVELIEEMKMRGFAADA 594



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 169/369 (45%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K+ N  +    F    +R    S    S VI  L K    D      +E+    +     
Sbjct: 221 KSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVV 280

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G    G  +   +   +M   +  P+V  ++A++++  ++   L A  +Y EM
Sbjct: 281 AYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEM 340

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P+ +T+S LI+G  K  +   A +MLD M  +G  PN  TY+I+I+  C+  R 
Sbjct: 341 VARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRV 400

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D   RLF ++   G   D V YN L+ GFC+  +++ A  L +     G  P + +Y  L
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DGL       +A   + KM + ++   + +Y ++I G+  A KV DA  L   +  +G+
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN +I G C  G L +A  L  ++ +    P+  T+ ILI        V  + +
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVE 580

Query: 400 LFNKMEKAG 408
           L  +M+  G
Sbjct: 581 LIEEMKMRG 589


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 244/504 (48%), Gaps = 28/504 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+SG  K+    +    + +M+     PD    N +LN           LAV   ++
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   +P+IVT++ LI GL    +   A  +   M + G  PN  TY  ++ GLC+     
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 221 EAYRLFLKM-KDSGC-----SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
            A +L  +M  DS        P  ++Y+ +++  CK RR DEA  L    +  G  P + 
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SY+ L+        ++EA   + +M  + ++P+VV + V+I  L + GKV +A  LL  M
Sbjct: 279 SYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 330

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            +RGIVP+   YN+LI+GFC +G L+ AR L V +  +   P+   +T+LI G C+   V
Sbjct: 331 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 390

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           ++A KL+N M + G  P V  + AL+ GL + G++  A  LF  M++   P         
Sbjct: 391 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG-------- 442

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D       +   C  G + +A ++  +L       DI  +N LI+G CK G +  
Sbjct: 443 -----DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLET 497

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +LF++L  + L+PD VTY  +I+   R  +   A  +F +M +NGCTP    Y +L+ 
Sbjct: 498 AWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIR 557

Query: 575 WSCRRRKFSLAFS-LWLQYLRDIS 597
                +K       L +   RD+S
Sbjct: 558 GFFESKKLEKVVELLHMMVQRDVS 581



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 225/470 (47%), Gaps = 38/470 (8%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P   ++T ++SGL +I    + + L+ +M+ SG SPD    N LLN  C + RV E LA+
Sbjct: 94  PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +    + G++P + +Y+ LI GL    R  +A   + +M +    P+ + YG +++GL  
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213

Query: 321 AGKVKDAMKL----LSDMRERGI--VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
            G +  A+KL    L+D    GI   P    Y+ +I   C     D+AR L  E+  +  
Sbjct: 214 TGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGM 273

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKAN 433
            P   ++T L        M ++A++LFN+M   G  P+V  FN LID LCK G+ +E  +
Sbjct: 274 TPTVISYTSL--------MWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKD 325

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LL   ++ G  P L               +  +++E +C  G ++ A ++ + +   G  
Sbjct: 326 LLEVMIQRGIVPNLL--------------TYNSLIEGFCLVGDLNSARELFVSMPSKGCE 371

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD+I Y  LING+CK   +  A+KL+  +   G RPD  TYG L+ GL +  +  DA ++
Sbjct: 372 PDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKL 431

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
           FG M   G      +Y   +   C+      A  L+ +        D E     I+   +
Sbjct: 432 FGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCK 491

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIF 658
            G++E A     E+  KL   +L P    Y I +   C+ GQV +A  +F
Sbjct: 492 AGKLETA----WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 537



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 222/527 (42%), Gaps = 94/527 (17%)

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A+ ++  M      P +  +  ++ GL++         L + MR  GI PD    N L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
              C++  + +  ++   I +R  +P+  T+T LI G+C    +  A  LF +M+K GC 
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 411 PSVGMFNALIDGLCKAGEL----------------------------------------- 429
           P+   +  L+ GLC+ G +                                         
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 430 EKANLLFYKMEI-GKNPTLFLRLS---QGGNRVHDK----------ASLQTMVEQYCTAG 475
           ++A  LF +M++ G  PT+    S   +   R+ ++           +   +++  C  G
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +A  +L  + + G +P+++TYNSLI GFC VG++N A +LF  +  KG  PD + Y 
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT 378

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            LING  +  + E+A +++  M Q G  P    Y +L+T                     
Sbjct: 379 VLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG-------------------- 418

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                           Q G+V +A +    M        L  Y I+L GLC++G + EA+
Sbjct: 419 --------------LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 464

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            +F+ L      +       LI GLCK G L+ A ++F    +    L+P V  Y +   
Sbjct: 465 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE--LQPDVVTYNIMIH 522

Query: 716 LFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
            F +  + V A  L  +M+  G   D   Y    +L+ G + ++++E
Sbjct: 523 EFCRGGQVVKANILFQKMEKNGCTPDKITY---ATLIRGFFESKKLE 566



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+  VGD   A E F  M    C+PDV  Y  ++N   +      A+ +Y  M+++ 
Sbjct: 345 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 404

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++ T+  L+ GL + GK   A K+   M   GI  + + Y I ++GLC+     EA 
Sbjct: 405 KRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAM 464

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF K+K      D   +N L++G CK  +++ A  L     ++   P + +Y+ +I   
Sbjct: 465 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 524

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            R  +  +A   ++KM +    PD + Y  +IRG  E+ K++  ++LL  M +R +  D
Sbjct: 525 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 35/163 (21%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ + ++G  K G   +A+E F K+K ++ + D+  +N                      
Sbjct: 446 IYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC--------------------- 484

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                         LI+GL K+GK E A ++ +++ Q  + P+  TY I+I   C+  + 
Sbjct: 485 --------------LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQV 530

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            +A  LF KM+ +GC+PD + Y  L+ GF + +++++ + LL 
Sbjct: 531 VKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLH 573



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  ++L+S N+ +  + F  LI G  K G  E A E F K+ + + QPDV  YN +++  
Sbjct: 465 ELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 524

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
            R    + A  ++ +M K  C P+ +T++ LI G  +S K E  +++L  M QR +
Sbjct: 525 CRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 580


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 178/690 (25%), Positives = 314/690 (45%), Gaps = 60/690 (8%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S  S  + +L+    +    E AL  FG++     + ++ I N +L      +    AL
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIVI 210
            +  +   +L C+P++ ++S+L+  L   GK+  A  +L  M + G +  PN   Y  VI
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    ++A  LF +M   G  PD V YN++++  CK R +D+A A LR       +
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+ LI G     ++ EA   +++M    I PDVV   +++  L + GK+K+A  +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              M  +G  PD + YN ++ G+   G L     L   +      P+ +TF +LI     
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            GM+D A  +FN+M   G  P V  +  +I  LC+ G+++ A   F +M           
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM----------- 458

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           + QG     DK +   +++ +CT G + KA +++ ++  +G   DI+ ++S+IN  CK+G
Sbjct: 459 IDQG--VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLG 516

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A  +F      GL PD+V Y  L++G   V + E A R+F  M   G  P+   Y 
Sbjct: 517 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 576

Query: 571 SLMTWSCRRRKFSLAFSLWLQYL-RDI----------------SGRDDESMKSIEEFLQK 613
           +L+   C+  +     SL+ + L R I                +GR   +     E  + 
Sbjct: 577 TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTES 636

Query: 614 GEVEN------AIQGLLE----------------MDFKLNDFQLAPYTIWLIGLCQDGQV 651
           G   +       ++GL +                M+ K+N   L      + G+ Q  +V
Sbjct: 637 GIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL---NTMIDGMFQTRRV 693

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           +EA ++F+ +   + + +  +   +I  L K G ++ A D+F      G     R+ N++
Sbjct: 694 EEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHV 753

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           +R LL  K N+ V A   L ++    + L+
Sbjct: 754 VRELL--KKNEIVRAGAYLSKIDERNFSLE 781



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 253/561 (45%), Gaps = 35/561 (6%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   + +  N LL GFC+ +R DE
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      P+VV Y  
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   YN+++   C    +D+A +   ++  + 
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LPN  T+  LI G    G   +A ++F +M +    P V   + L+  LCK G++++A 
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 348 DVFDTMAMKGQNPDVF--------------SYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD  T+N LI  +   G ++ A+ +F E++  G++PD VTY T+I  L R+ + +DA  
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           K G V +A Q + ++   +    L P    Y + + G C  G++++AL +F  +V     
Sbjct: 514 KLGRVMDA-QNIFDLTVNVG---LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-- 567

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              P+ V    L++G CK G +D  + +F   L+ G  ++P    Y +      +  + V
Sbjct: 568 -IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG--IKPSTILYSIIIDGLFEAGRTV 624

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
            A      M   G  +D C Y
Sbjct: 625 PAKMKFHEMTESGIAMDICTY 645



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 180/355 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   V      +  +I+   ++G  + A+E F +M +    PD Y YN ++     
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 479

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               L A  +  E++      +IV FS +IN L K G+   A  + D     G+ P+   
Sbjct: 480 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 539

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y +++ G C + + ++A R+F  M  +G  P+ V Y  L+NG+CK+ R+DE L+L R   
Sbjct: 540 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 599

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P    YS +IDGLF A R   A   + +M E  I  D+  Y +++RGL +     
Sbjct: 600 QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 659

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L  ++R   +  +    N +I G      +++A+ L   I +   +P+  T++I+I
Sbjct: 660 EAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMI 719

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + + G+V++A+ +F+ M+ AGC P+  + N ++  L K  E+ +A     K++
Sbjct: 720 TNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKID 774



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 43/278 (15%)

Query: 66  NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV------FFVLISGYYKVGDCEKALE 119
           ++ V +ML+  +G+ L  +    LR  +  V + +      +  L++GY K+G  ++ L 
Sbjct: 536 DAVVYNMLM--DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F +M +   +P   +Y                                   S++I+GL 
Sbjct: 594 LFREMLQRGIKPSTILY-----------------------------------SIIIDGLF 618

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           ++G+T  A     EMT+ GI  +  TY IV+ GL +    DEA  LF +++      + +
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 678

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
             N +++G  + RRV+EA  L  S  +   VP + +YS +I  L +    +EA   +  M
Sbjct: 679 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 738

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
                EP+  L   ++R L +  ++  A   LS + ER
Sbjct: 739 QNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 1/188 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ ++I G ++ G    A   F +M E     D+  YN VL   F+ + F  A+ ++ E+
Sbjct: 609 LYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             +N   NI+T + +I+G+ ++ + E A  +   +++  ++P+  TY+I+I+ L +    
Sbjct: 669 RAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLV 728

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  +F  M+++GC P+    N ++    K   +  A A L   ++  F     +   L
Sbjct: 729 EEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLL 788

Query: 280 IDGLFRAK 287
           +D LF +K
Sbjct: 789 VD-LFSSK 795


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 244/500 (48%), Gaps = 16/500 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L+E+     S     +   I G  +VG  E AL+    +   +   +VY YNA+++  
Sbjct: 276 EILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGL 335

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +K     AL V  EM      P++ T+S+LI+G  K G  E  + +++EM    + P+ 
Sbjct: 336 CKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSL 395

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            +Y+ +  GLC+   +D +  +F  +  +G   D  AY+ L+ GFC    +D A  L+  
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             ++   P   ++  L+ G  +   +  A  ++  M E  I P +    V+I      G+
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V++A+ L+++M+ +GI P+ + YNA+I   C     ++A  L   + KR+ LP+   ++ 
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI G  +      A  L+ +M K G  P +  +  LI+ LC    + +A  LF KM E G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P              DK S  +++  +C  G + KA+ +  ++ + G+LP ++TY SL
Sbjct: 636 MTP--------------DKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSL 681

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           ++G+CK+  I+ A  L  E++ KG+ PD VTY  LI   +R    + A  +  +M +NG 
Sbjct: 682 VDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGV 741

Query: 563 TPSPAVYKSLMTWSCRRRKF 582
            P    Y  ++ W  + +K 
Sbjct: 742 LPDHMTYM-MLEWLLKAKKL 760



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 168/640 (26%), Positives = 284/640 (44%), Gaps = 71/640 (11%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + F+L+   L+  +    SV+  VF +LI  +      E A++ F + K+   +      
Sbjct: 160 DAFELFPILLESPKDAARSVI--VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSC 217

Query: 137 NAVLNI---AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG------KTEVA 187
           N +L     A R++ FL +L  + EM      PN+ T+++++N   K         T  A
Sbjct: 218 NFLLKCLAEANRRE-FLRSL--FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQA 274

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            ++L+EM + G  P   TY+  I GLC++   + A      +  +    +   YNA+++G
Sbjct: 275 TEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHG 334

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            CK   +DEAL +L   +  G  P + +YS LI G  +    ++      +M    +EP 
Sbjct: 335 LCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  +  GL +      ++ +  D+   G   D   Y+ LIKGFC  G LD A  L  
Sbjct: 395 LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLME 454

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ + +  P+   F  L+ G C+ G+  +A + FN M + G  PS+   N +ID  C+ G
Sbjct: 455 EMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREG 514

Query: 428 ELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            +E+A  L  +M+  G  P LF              +   ++ + C      +A ++   
Sbjct: 515 RVEEALNLMNEMQTQGIFPNLF--------------TYNAVINRLCKERKSERALELFPL 560

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + +   LP ++ Y++LI+GF K  N   AL L+  +   G+ PD V Y  LIN L    R
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             +A+ +F +M +NG TP    Y S++   CR      A++L+                 
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALF----------------- 663

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV-ECK 665
             E LQ+G +   +                 YT  + G C+  ++    +I  +L+ E K
Sbjct: 664 -NEMLQRGHLPTVVT----------------YTSLVDGYCKMNRI----DIADMLIDEMK 702

Query: 666 AIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
                P  V    LI    +RG LD A+++     +NG +
Sbjct: 703 RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 221/471 (46%), Gaps = 48/471 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    D   + L+E++S  +S     + +LI G+ K GD EK L    +MK 
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            + +P +  Y+++ +   +K+L  ++L ++ ++       +   +S+LI G    G  + 
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+++EM +  + P+   +  ++ G C++     A   F  M + G  P     N +++
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+  RV+EAL L+   +  G  P L +Y+ +I+ L + ++ + A   +  M +  + P
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            VV+Y  +I G ++    + A+ L + M + G+ PD   Y  LI   C    + +A +L 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +    P+  ++T +I G CR G +  A  LFN+M + G  P+V  + +L+DG CK 
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKM 688

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             ++ A++L  +M+                                              
Sbjct: 689 NRIDIADMLIDEMK---------------------------------------------- 702

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
               G  PD++TYN LI    + GN++ AL++  E++  G+ PD +TY  L
Sbjct: 703 --RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 187/369 (50%), Gaps = 1/369 (0%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  S S++   L K    D+      +L +         + +LI G+   GD + A +  
Sbjct: 394 SLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLM 453

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M   +  PD   + ++++   +  L++ AL  +  M++   LP+I T +++I+   + 
Sbjct: 454 EEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCRE 513

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ E A+ +++EM  +GI PN FTY  VI+ LC+  +++ A  LF  M      P  V Y
Sbjct: 514 GRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVY 573

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           + L++GF K     +AL L     K G  P + +Y+ LI+ L    R  EAY  ++KM E
Sbjct: 574 STLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTE 633

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + PD + Y  +I G    G ++ A  L ++M +RG +P    Y +L+ G+C +  +D 
Sbjct: 634 NGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDI 693

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+ ++   P+  T+ +LI    R G +D A ++ N+M++ G  P   M   +++
Sbjct: 694 ADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD-HMTYMMLE 752

Query: 422 GLCKAGELE 430
            L KA +L+
Sbjct: 753 WLLKAKKLK 761



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 146/350 (41%), Gaps = 27/350 (7%)

Query: 366 QVEIWKRDS-LPNTHTFTILICGMCR--NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           ++ + KR S +   H  + ++  + +  N  V    K    M+K G   S+  F  +++ 
Sbjct: 74  EIRVMKRRSRIHRKHVLSPVVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNV 133

Query: 423 LCKAG-ELEKANLL------FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           L  AG  +E   LL      + K+ +       + L    +          +++ +    
Sbjct: 134 LALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANS 193

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           ++  A  + +Q  ++G      + N L+    +         LF+E++  G  P+  TY 
Sbjct: 194 MLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYT 253

Query: 536 TLIN-------GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            ++N       G   +D  + A  I  +M +NG +P+   Y + +   CR      A   
Sbjct: 254 IMMNFYCKGNFGEADIDTRQ-ATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALD- 311

Query: 589 WLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           +++ L   +G  +    +  I    +KGE++ A++ L EM        +  Y+I + G C
Sbjct: 312 FVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFC 371

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
           + G V++ L +     E K     PS V    L HGLCK+   D+++D+F
Sbjct: 372 KQGDVEKGLYLIE---EMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 168/659 (25%), Positives = 290/659 (44%), Gaps = 74/659 (11%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YNAV+    R+     AL     MV+    P+  TF+ LI G  ++ + +VA  + D+M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            RG   +  +Y  +I G C+  R DEA  LF +M      PD   Y AL+ G CK  R +
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGE 129

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           E L +LR  ++ G+ P   +Y+ ++D     ++  EA    ++MFE+ + P VV    +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
               + G++ DA+++L  M+ RG  P+ + YNAL++GFC+ G + +A +L  ++      
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+ +LI G C +G ++ A +L   ME  G       +NALI+ LCK G  ++A  L
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 436 FYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F  +E  G  P              +  +  +++   C +G +  A+K L ++  +G  P
Sbjct: 310 FDSLETRGIKP--------------NAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTP 355

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D  TY+S I   CK+      L    E+  K ++P +V Y  +I+ L +        R +
Sbjct: 356 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW 415

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-----------------IS 597
           G+M  +GC P    Y + M   C   + + A ++ ++  ++                   
Sbjct: 416 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 475

Query: 598 GRDDESMKSIEEFLQKGEVENA------IQGLLEMDFKLNDFQLAPYTIW---------- 641
           G+ D ++  +++      V N       ++ L+ M    +   L P  +W          
Sbjct: 476 GQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFG 535

Query: 642 --------------------LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
                               L G  +DG+ +EA ++ S++ E    +       L+   C
Sbjct: 536 LFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFC 595

Query: 682 K-RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           K + YLD A  +    +++GFI       +LL  L+      K     +  R K    D
Sbjct: 596 KSKRYLD-AWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 653



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 232/506 (45%), Gaps = 30/506 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  L+ G  K G  E+ L    +MKE   +P    Y AV++    ++    A  +  EM
Sbjct: 114 MYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM 173

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P +VT + +IN   K G+   A+++L+ M  RG  PN +TY  ++ G C   + 
Sbjct: 174 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKV 233

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  L  KM+  G +PD V YN L+ G C    ++ A  LLR  E DG +    +Y+ L
Sbjct: 234 HKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNAL 293

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L +  R D+A + +  +    I+P+ V +  +I GL ++GKV  A K L  M   G 
Sbjct: 294 INALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC 353

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PDTY Y++ I+  C +    +  S   E+ ++D  P+T  +TI+I  + +        +
Sbjct: 354 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 413

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            + +M  +GC P V  +   +   C  G L +A  +   ME+ KN               
Sbjct: 414 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL--MEMSKNGVTV----------- 460

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN--------------- 504
           D  +  T+++ + + G    A  IL Q+    ++P+  TY  L+                
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 520

Query: 505 --GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
             G  K   +     LF  ++     P+S TY +++ G     R E+A  +   M ++  
Sbjct: 521 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 580

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSL 588
           + +  +Y +L+T  C+ +++  A+ L
Sbjct: 581 SLNEDIYTALVTCFCKSKRYLDAWVL 606



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 224/497 (45%), Gaps = 44/497 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+   G   KA+    KM+     PD   YN ++    R Q     +   + +
Sbjct: 219 TYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLI----RGQCIDGHIESAFRL 274

Query: 160 VKL----NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           ++L      + +  T++ LIN L K G+T+ A  + D +  RGI PN  T+  +I+GLC+
Sbjct: 275 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             + D A++   KM  +GC+PD   Y++ +   CK++   E L+ +    +    P   +
Sbjct: 335 SGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 394

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ +I  L + + Y      + +M      PDVV Y   +R     G++ +A  +L +M 
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 454

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G+  DT  YN L+ G   +G  D A S+  ++    S+PN  T+ IL+  + R  +V+
Sbjct: 455 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 514

Query: 396 DAQKL-----------------FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           D   L                 F+ M+K    P+ G ++++++G  + G  E+A  L   
Sbjct: 515 DVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSL 574

Query: 439 ME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M+   I  N  ++  L                V  +C +     A+ ++  + + G +P 
Sbjct: 575 MKEDSISLNEDIYTAL----------------VTCFCKSKRYLDAWVLVCSMIQHGFIPH 618

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +++Y  L++G    G  + A ++F   + K   PD + +  +I+GL +    + +  +  
Sbjct: 619 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 678

Query: 556 QMPQNGCTPSPAVYKSL 572
            + +  C PS   Y  L
Sbjct: 679 MLERMNCRPSHQTYAML 695



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 216/491 (43%), Gaps = 55/491 (11%)

Query: 240 AYNALLN-----------------------------------GFCKLRRVDEALALLRSF 264
            YNA++                                    G+C+  +VD A  L    
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              GF   + SY+ LI+G     R DEA     ++F E  +PD+ +Y  +++GL +AG+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAV----ELFGEMDQPDMHMYAALVKGLCKAGRG 128

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           ++ + +L  M+E G  P T  Y A++   C      +A  +  E++++   P   T T +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GK 443
           I   C+ G + DA ++   M+  GC P+V  +NAL+ G C  G++ KA  L  KM + G 
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           NP              D  +   ++   C  G I  A+++L  +   G + D  TYN+LI
Sbjct: 249 NP--------------DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           N  CK G  + A  LF  L+ +G++P++VT+ +LINGL +  + + A++   +M   GCT
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQG 622
           P    Y S +   C+ +      S   + L +D+          I + L++       + 
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
             EM     +  +  YT  +   C +G++ EA N+   + +    V   +   L+ G   
Sbjct: 415 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHAS 474

Query: 683 RGYLDLAMDVF 693
            G  D A+ + 
Sbjct: 475 IGQTDHAVSIL 485



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 173/391 (44%), Gaps = 17/391 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K    D      D L +  +   +  F  LI+G  K G  + A +   KM  
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS 350

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD Y Y++ +    + +     L+   EM++ +  P+ V ++++I+ L K     +
Sbjct: 351 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 410

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +   EM   G  P+  TYT  +   C   R +EA  + ++M  +G + D +AYN L++
Sbjct: 411 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 470

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI-----------------DGLFRAKRY 289
           G   + + D A+++L+       VP   +Y  L+                  G+++A   
Sbjct: 471 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 530

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            + +  +  M + +  P+   Y  ++ G SE G+ ++A  L+S M+E  I  +   Y AL
Sbjct: 531 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 590

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  FC       A  L   + +   +P+  ++  L+ G+   G  D A+++F        
Sbjct: 591 VTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY 650

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            P   ++  +IDGL K G  + +  +   +E
Sbjct: 651 SPDEIVWKVIIDGLIKKGHSDISREMIIMLE 681



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 168/374 (44%), Gaps = 17/374 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+ L K    D+ W+ L+++ S   +  +  +   I    K+   ++ L   G+M +
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +P    Y  V++   +++ + L    + EMV   C P++VT++  +      G+   
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L EM++ G+  +   Y  ++ G   I + D A  +  +M      P+   Y  LL 
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 505

Query: 247 GFCKLRRVDEAL-----------------ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              ++R V++ L                  L    +K+ F+P  G+YS +++G     R 
Sbjct: 506 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 565

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +EA +    M E+ I  +  +Y  ++    ++ +  DA  L+  M + G +P    Y  L
Sbjct: 566 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHL 625

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G    G  D+A+ + +    +D  P+   + ++I G+ + G  D ++++   +E+  C
Sbjct: 626 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 685

Query: 410 FPSVGMFNALIDGL 423
            PS   +  L + L
Sbjct: 686 RPSHQTYAMLTEEL 699



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 136/333 (40%), Gaps = 17/333 (5%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  Q G  F     ++    S  + + VI  LLK   + L  +T  E+ S   +    
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +   +  Y   G   +A     +M +     D   YN +++          A+++  +M
Sbjct: 429 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 488

Query: 160 VKLNCLPNIVTFSLLIN-----------------GLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +PN  T+ +L+                  G+ K+ +      + D M +   LPN
Sbjct: 489 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 548

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY+ ++ G  +  R +EA  L   MK+   S +   Y AL+  FCK +R  +A  L+ 
Sbjct: 549 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 608

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           S  + GF+P L SY  L+ GL    + D+A   +     +   PD +++ V+I GL + G
Sbjct: 609 SMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 668

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
               + +++  +      P    Y  L +   D
Sbjct: 669 HSDISREMIIMLERMNCRPSHQTYAMLTEELPD 701


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 234/463 (50%), Gaps = 15/463 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+ +F++L+ G +     EV   +L EM  RGI  N  T+ +++S LC     D+A   
Sbjct: 126 PNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSY 185

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F  +  + C P    Y  L++G CK  +V+ A  +     + G+ P + +YS LIDGL +
Sbjct: 186 FNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSK 245

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A R DEA      M      P  V Y  ++ GL + G++++A+K + +MR R + P    
Sbjct: 246 AGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDT 305

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ ++ G+  +G +++A ++  E+  RD  P+T ++T+ I  +   G  ++A+K+F  M 
Sbjct: 306 YSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 365

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + GC P +  +  +ID  CK G +  A             T  LRL        ++    
Sbjct: 366 EKGCKPDMHTYGIIIDNFCKEGSMAAA-------------THVLRLMDKAAVKPNRYIYT 412

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ +  +  + +A ++  ++ + G LP  +TYN++IN  CK+  ++ AL+L +E+Q +
Sbjct: 413 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 472

Query: 526 G--LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
              L P  VTY  +I+GL +V  EE AF +  +M  NG  P    Y SL+       K S
Sbjct: 473 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 532

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
            A  L  + L+     DD +  ++ + L + +V+ A   L EM
Sbjct: 533 RAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAWDLLQEM 575



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 267/549 (48%), Gaps = 24/549 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS--FASNSAVISMLLKPNGFDLYWQTL 86
           LS+ T   V+ + +       F+ WAA R       F  NS +++++   +  D      
Sbjct: 61  LSRDTFGGVLGRLRCTCNALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQ 120

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
             +   NVS     F +L+ G+    D E       +MK      +   +  +L+    +
Sbjct: 121 SSISEPNVSS----FNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCAR 176

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    A++ +  +    C P + T+++L++GL K+ K E A  + +EM ++G  P+   Y
Sbjct: 177 RDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAY 236

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           + +I GL +  R DEA +L   M   G  P  VAY +++ G CK  R+ EA+  ++   +
Sbjct: 237 SSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 296

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
               PR+ +YS ++ G     + ++A+A   +M +    PD + Y + I  L   G+ ++
Sbjct: 297 RRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 356

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A K+   M E+G  PD + Y  +I  FC  G +  A  +   + K    PN + +T+++ 
Sbjct: 357 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 416

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK--- 443
           G  ++  +++A +L+ ++ K G  PS   +N +I+ LCK  ++++A  L  +M+  K   
Sbjct: 417 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL 476

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P++               +   ++      G+  +A+ +L ++ ++G +PD  TY SLI
Sbjct: 477 EPSI--------------VTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLI 522

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
                 G ++ A++L +E+   G+ PD  TYGTL+  L R D +  A+ +  +M +NG T
Sbjct: 523 QTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDA-AWDLLQEMMRNGHT 581

Query: 564 PSPAVYKSL 572
           P+   +K++
Sbjct: 582 PNEFTFKAV 590



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 207/499 (41%), Gaps = 53/499 (10%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + GF   L + + L+  L R     +A  +++    E   P+V  + +++RG +     +
Sbjct: 89  RPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFE 145

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
               LL +M+ RGI  +   +  ++   C    LD+A S    +      P   T+T+L+
Sbjct: 146 VVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLV 205

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKN 444
            G+C+   V+ A  +F +M + G  P +  +++LIDGL KAG +++A  L   M   G  
Sbjct: 206 DGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPP 265

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           PT                +  ++V   C  G I +A K + ++      P + TY+ ++ 
Sbjct: 266 PT--------------AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVT 311

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+  +G +  A  + +E+  +   PD+++Y   I  L  + R E+A ++F  M + GC P
Sbjct: 312 GYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKP 371

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y  +                                  I+ F ++G +  A   L 
Sbjct: 372 DMHTYGII----------------------------------IDNFCKEGSMAAATHVLR 397

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
            MD          YT+ + G  +  +++EAL ++  +++   + +  +   +I+ LCK  
Sbjct: 398 LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLK 457

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +D A+++     +    L P +  Y +      K   +  A+ LL  M   G   D   
Sbjct: 458 KMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFT 517

Query: 745 YPKTKSLLPGPWN-TREME 762
           Y      L G    +R ME
Sbjct: 518 YTSLIQTLAGAGKVSRAME 536



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKA 117
           L S  + + VI+ L K    D   + L E++     +   +  + ++I G  KVG  E+A
Sbjct: 440 LPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERA 499

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            +   +M +    PD + Y +++           A+ +  EM+K    P+  T+  L+  
Sbjct: 500 FDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQI 559

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL-CQINR 218
           L +S   + A  +L EM + G  PN+FT+  V  G   Q++R
Sbjct: 560 LCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRLQLDR 600


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 270/567 (47%), Gaps = 58/567 (10%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV-ISMLLKPN 77
           E  L  L+  L+   V +V++  ++ +   RFF WA +  R R  +S   V + +L K  
Sbjct: 201 EGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTK 260

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  +    + +  + F  ++  Y + G    A++    M++   +P++ I N
Sbjct: 261 LCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICN 320

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             ++I                              ++ N L K      A++  + M   
Sbjct: 321 TAIHIL-----------------------------VMGNELKK------ALRFAERMVLI 345

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI PN  TY  +I G C +++ D+A  L  +M   GCSPD V+Y  ++   C+ +R++E 
Sbjct: 346 GIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEI 405

Query: 258 LALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
             L++  + D   +P   +Y+ LI  L +    DEA    ++  + + + D V Y  ++ 
Sbjct: 406 RELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVH 465

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
              + GK++ A +L+S+M  +G  PD   Y +++ GFC +G LDQA+ +  +++K    P
Sbjct: 466 AYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKP 525

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+T  + G+CRNG   +A+K+ N  E+    P+   ++ ++ GL + G+L +A  + 
Sbjct: 526 NAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVV 585

Query: 437 YKMEIGK----NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +M IGK    NP                  +  +V   C  G   +A ++L +    G 
Sbjct: 586 REM-IGKGFFPNPV----------------EINLLVHSLCRDGKPREANQLLKECMNKGC 628

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             +++ + ++I+GFC+  ++  AL L  ++ L    PD+VTY  LI+ L + DR E+A  
Sbjct: 629 AVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATE 688

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +  +M + G  PSP  Y+S++   CR+
Sbjct: 689 LTMKMLRQGLVPSPVTYRSVIHQYCRK 715



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 15/400 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD   YN+++ +  +      AL +  E  KL    + V +S +++   K GK + A ++
Sbjct: 420 PDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKEL 479

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           + EM  +G  P+  TYT V+ G C+I + D+A ++  +M    C P+ V Y   LNG C+
Sbjct: 480 VSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCR 539

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             +  EA  ++   E++ + P   +YS ++ GL R  + +EA    R+M  +   P+ V 
Sbjct: 540 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 599

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
             +++  L   GK ++A +LL +   +G   +   +  +I GFC    L+ A SL  +++
Sbjct: 600 INLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             +  P+T T+T LI  + +   +++A +L  KM + G  PS   + ++I   C+ G +E
Sbjct: 660 LCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 719

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
               L  KM +        R     N V         +E+ C  G + +A  +L ++  +
Sbjct: 720 DLLKLLKKMLLKS------RFQTAYNLV---------IEKLCKFGYLEEANSLLGEVLRT 764

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            +  D  T + L+  +  VG    A K+   +  + L PD
Sbjct: 765 ASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPD 804



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 198/427 (46%), Gaps = 23/427 (5%)

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           RA R  +A      M +  +EP++ +    I  L    ++K A++    M   GI P+  
Sbjct: 293 RAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVV 352

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN LIKG+C++  +DQA  L  ++  +   P+  ++  ++  +CR+  +++ ++L  KM
Sbjct: 353 TYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKM 412

Query: 405 EK-AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           +  +   P    +N+LI  L K G  ++A  +  + E        LR         DK  
Sbjct: 413 QTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEK-------LRFKV------DKVE 459

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +V  YC  G I KA +++ ++   G  PD++TY S+++GFC++G ++ A K+ +++ 
Sbjct: 460 YSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMY 519

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
               +P++VTY T +NGL R  +  +A ++     +   TP+   Y  ++    R  K +
Sbjct: 520 KHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLN 579

Query: 584 LAFSLWLQYLRDISGRD-----DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            A  +    +R++ G+       E    +    + G+   A Q L E   K     +  +
Sbjct: 580 EACDV----VREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNF 635

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           T  + G CQ   ++ AL++   +  C       +   LI  L K   ++ A ++ +  L+
Sbjct: 636 TTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLR 695

Query: 699 NGFILRP 705
            G +  P
Sbjct: 696 QGLVPSP 702



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 2/212 (0%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C  +V  +  V++   +K     AL++  +M   N  P+ VT++ LI+ L+K+ + E A 
Sbjct: 628 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEAT 687

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++  +M ++G++P+  TY  VI   C+  R ++  +L  KM     S    AYN ++   
Sbjct: 688 ELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLK--SRFQTAYNLVIEKL 745

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK   ++EA +LL    +        +   L++          AY    +MF   + PD+
Sbjct: 746 CKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDL 805

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            L   + + L   GK+++A +L+    ERG V
Sbjct: 806 KLCEKVSKRLVVEGKLEEADRLVLRFVERGHV 837


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 272/621 (43%), Gaps = 84/621 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+  +   G    AL +   M+ F   PDV  YN +L    RK +   A  +   M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    P   T++ L++  ++ G  + A  +++ MT  G  P+ +TY ++ +GLCQ  + 
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331

Query: 220 DEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           DEA++L  +M+  S  SPD V YN L++   K +R  +AL LL      G    L +++ 
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++ GL R  + +EA    + M EE + PDV+ Y  +I    +A  V  A  L+ +M   G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSL------------QV------------------- 367
           +  DT+  N L+   C     ++A  L            +V                   
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 368 ----EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
               E+ KR   P+ +T+  LI G+C  G + +A    N++ K G  P    +N +I   
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK G+LEKA     KM E    P              D  +  T++   C  G + KA K
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKP--------------DVVTCNTLMNGLCLHGKLEKAIK 617

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +    AE G   D+ITYN+LI   CK G+++ AL  F +++ +GL+PD+ TY  +++ L 
Sbjct: 618 LFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALS 677

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
              R E+A  +  ++ ++G                   K S  FS  L            
Sbjct: 678 EAGRSEEAQNMLHKLDESG-------------------KLSERFSYPL------------ 706

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            +KS  E ++ G+ +  ++   E            Y   +  LC  GQ+KEA  +   ++
Sbjct: 707 -IKSSAEEVKTGK-DPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMM 764

Query: 663 ECKAIVTPPSCVKLIHGLCKR 683
           +    V   + + L+ GL KR
Sbjct: 765 QKGMSVDSSTYITLMEGLIKR 785



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 240/533 (45%), Gaps = 50/533 (9%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  ++   ++     +  L+S Y ++G  ++A      M  F  +PD++ YN +     +
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 146 KQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                 A  +  EM  L+ + P++VT++ L++   K  ++  A+ +L+EM  +G+  +  
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T+ IV+ GLC+  + +EA      M + G +PD + YN L++ +CK R V +A  L+   
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            + G      + + L+  L + KRY+EA    R   +    PD V YG ++    +  K 
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A+ L  +M +R + P  Y YN LIKG C +G L +A     E+ K+  +P+  T+ I+
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I   C+ G ++ A +  NKM +    P V   N L++GLC  G+LEKA  LF        
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESW----- 622

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                  ++ G +V D  +  T+++  C  G +  A      +   G  PD  TYN +++
Sbjct: 623 -------AEKGKKV-DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 674

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV-------------------- 544
              + G    A  +  +L   G   +  +Y  + +  + V                    
Sbjct: 675 ALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKG 734

Query: 545 -DRE---------------EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
            D+E               ++A  +  +M Q G +   + Y +LM    +R+K
Sbjct: 735 GDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 237/538 (44%), Gaps = 17/538 (3%)

Query: 130 QPDVYIYNAVLNIAFRKQLF--LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           +P +   NAVL+   R        +L V+  ++ L   PN  TF+LL++     G    A
Sbjct: 170 RPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADA 229

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  L  M   G+ P+  TY  ++   C+     EA  L  +MK  G +P    YN L++ 
Sbjct: 230 LSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSA 289

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-EP 306
           + +L  + +A  ++ +    GF P L +Y+ L  GL +A + DEA+    +M    I  P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV Y  ++    +  +  DA+ LL +MR++G+      +N ++KG C  G L++A    
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + +    P+  T+  LI   C+   V  A  L ++M ++G        N L+  LCK 
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
              E+A  L             LR       V D+ S  T++  Y        A  +  +
Sbjct: 470 KRYEEAEEL-------------LRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDE 516

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +++    P I TYN+LI G C +G +  A+    EL  KGL PD  TY  +I+   +   
Sbjct: 517 MSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGD 576

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E AF+   +M +N   P      +LM   C   K   A  L+  +       D  +  +
Sbjct: 577 LEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNT 636

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            I+   + G+V+ A+    +M+ +        Y + L  L + G+ +EA N+   L E
Sbjct: 637 LIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 241/548 (43%), Gaps = 41/548 (7%)

Query: 250 KLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAW--YRKMFEEKIEP 306
           +LR    A  LL SF + G V P L + + ++  L R+       +   +R +   ++ P
Sbjct: 149 RLRLPHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHP 208

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   + +++      G + DA+  LS M+  G+ PD   YN L+K  C  G+L +AR+L 
Sbjct: 209 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLL 268

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + K    P   T+  L+    R G +  A  +   M   G  P +  +N L  GLC+A
Sbjct: 269 ARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQA 328

Query: 427 GELEKANLLFYKME---------IGKNPTL-----FLRLSQGGNRVHD------KASLQT 466
           G++++A  L  +ME         +  N  +     + R S   N + +      K+SL T
Sbjct: 329 GKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVT 388

Query: 467 ---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +V+  C  G + +A   L  + E G  PD+ITYN+LI+ +CK  N+  A  L  E+ 
Sbjct: 389 HNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMV 448

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             GL+ D+ T  TL+  L +  R E+A  +    PQ G  P    Y ++M    +  K  
Sbjct: 449 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPE 508

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ---LAP--- 637
            A  LW     ++S R           L KG     I  L E   KLN+     L P   
Sbjct: 509 PALYLW----DEMSKRKLTPSIYTYNTLIKGLC--TIGKLTEAIDKLNELMKKGLVPDDT 562

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y I +   C++G +++A    + ++E        +C  L++GLC  G L+ A+ +F   
Sbjct: 563 TYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESW 622

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPW 756
            + G  +     N L+++L   KD     A H    M++ G   DA  Y    S L    
Sbjct: 623 AEKGKKVDVITYNTLIQAL--CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 680

Query: 757 NTREMENM 764
            + E +NM
Sbjct: 681 RSEEAQNM 688


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 171/696 (24%), Positives = 321/696 (46%), Gaps = 60/696 (8%)

Query: 56  KRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           +R + R +F++ + +I  L +    +   + L +++     V   +F  L+    + G  
Sbjct: 37  RRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV 96

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
             AL    ++K    +PD+ +YN  ++   +     +A   ++E+      P+ V+++ +
Sbjct: 97  ADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSM 156

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  L K+G+   A ++  +M     +P  + Y  +I G     R ++AY+L  ++++ GC
Sbjct: 157 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 216

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P  V++N++L    K R+VDEAL+L    +KD   P   +Y+ +ID L    R +EAY 
Sbjct: 217 IPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYR 275

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M    + P+++   +M+  L +A K+++A K+     +RG  PD   Y +LI G  
Sbjct: 276 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 335

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +D+A  L  ++       N   +T LI     +G  +D  K+F ++ + GC P + 
Sbjct: 336 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLT 395

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLSQGG------NRVH-- 459
           + N  +D + KAGE+EK  ++F  +       ++     L   L++ G      N  H  
Sbjct: 396 LLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM 455

Query: 460 -------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +   +V+ +C +G +HKAY+IL ++ E    P + TY ++++G  K+  +
Sbjct: 456 KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRL 515

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A  LF+E + KG+  + V Y +LI+G  +V R ++A+ I  +M + G TP+   + SL
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +                            +++   EE     E     Q + EM    N 
Sbjct: 576 L----------------------------DALVKAEEI---NEALVCFQSMKEMKCPPNT 604

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           +    Y+I + GLC+  +  +A   +  + +   +    +   +I GL K G +  A  +
Sbjct: 605 Y---TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 661

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
           F     NG I      N L+  +  S  N+ + AY 
Sbjct: 662 FERFKANGGIPDAASFNALIEGM--SNANRAMEAYQ 695



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 266/576 (46%), Gaps = 61/576 (10%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           LPN+    +  + L +  R D+A      M+     P F AY  L+    + RR + AL 
Sbjct: 8   LPNQACADLA-AALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           LLR  ++ G+   +  ++ L+  L R  +  +A A   ++    +EPD+VLY V I    
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +AG V  A K   +++ +G+ PD   Y ++I   C  G L +A  L  ++    S+P  +
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 186

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            +  +I G    G  +DA KL  ++ + GC PSV  FN+++  L K  ++++A  LF  M
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +    P              + ++   +++  C  G + +AY+IL ++  +   P+++T 
Sbjct: 247 KKDAEP--------------NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 292

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +++  CK   +  A K+F+    +G  PD VTY +LI+GL +  + ++A+R+F +M  
Sbjct: 293 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 352

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK------ 613
            G   +P VY SL+      R F             I GR ++  K  +E +++      
Sbjct: 353 AGHNANPVVYTSLI------RNFF------------IHGRKEDGHKVFKELIRRGCKPDL 394

Query: 614 -------------GEVENAIQGLLEMDFKLNDF--QLAPYTIWLIGLCQDGQVKEALNIF 658
                        GEVE     ++  D +   F   +  Y+I + GL + GQ +E  NIF
Sbjct: 395 TLLNTYMDCVFKAGEVEKG--RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 452

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             + +    +   +   ++ G CK G +  A ++ L  +K   + +P V  Y       +
Sbjct: 453 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEI-LEEMKEKCV-QPTVATYGAIVDGLA 510

Query: 719 KDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           K ++   AY L    KS G +L+  LY    SL+ G
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELNVVLY---SSLIDG 543



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 208/440 (47%), Gaps = 9/440 (2%)

Query: 2   SSTLNEVLTILDTVTPIEPALE--------PLLP-FLSKTTVTSVIMKTKNPQVGFRFFI 52
           SST N ++ +L     +E A           L P  L+   +   + K +  +  ++ F 
Sbjct: 254 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 313

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            A++R       +  ++I  L K    D  ++  +++     +    V+  LI  ++  G
Sbjct: 314 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 373

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E   + F ++    C+PD+ + N  ++  F+         ++ ++     LP++ ++S
Sbjct: 374 RKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 433

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI+GL+K+G+      +   M Q+G   +   Y  V+ G C+  +  +AY +  +MK+ 
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
              P    Y A+++G  K+ R+DEA  L    +  G    +  YS LIDG  +  R DEA
Sbjct: 494 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 553

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           Y    +M ++ + P+V  +  ++  L +A ++ +A+     M+E    P+TY Y+ LI G
Sbjct: 554 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 613

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C +   ++A     ++ K+  +PN  T+T +I G+ + G + DA  LF + +  G  P 
Sbjct: 614 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 673

Query: 413 VGMFNALIDGLCKAGELEKA 432
              FNALI+G+  A    +A
Sbjct: 674 AASFNALIEGMSNANRAMEA 693



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  L+E+    ++     +  L+    K  +  +AL  F  MKE
Sbjct: 538 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+ Y Y+ ++N   R Q +  A   + +M K   +PN+VT++ +I+GL+K G    
Sbjct: 598 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 657

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL-KMKDSGCSPDFV 239
           A  + +     G +P+  ++  +I G+   NRA EAY+  + ++  S CS +F+
Sbjct: 658 AYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQTTVYQLSSSSCSWNFL 711


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 275/589 (46%), Gaps = 27/589 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LR   + + +     L+ GY +  D  KA      M    C+ + Y Y  ++      + 
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARC 264

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL + + MV   C  N+ T++LLI GL K G+   A  +LDEM  RG++P+ +TY  
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C+  R  +A  +   M+ +GC+PD   YN+L+ G C   ++DEA  LL      G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           F P + +++ LI+G  +A+R D+A      M     + D+  YGV+I  L +  ++K+A 
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAK 443

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           + L++M   G+ P+   Y ++I G+C +G++  A  +   +      PN  T+  LI G+
Sbjct: 444 ETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL 447
            ++  +  A  L  KM++ G  P V  +  LI G CK  E + A  LF  ME  G  P  
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP-- 561

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D+ +   + +  C +G   +AY  L++    G +   +TY SL++GF 
Sbjct: 562 ------------DEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFS 606

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN + A  L +++  +G + D  TY  L+  L +  +  +A  I  QM  +G   +  
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLL 624
            Y  +++   +  K   A SL+ + +   SG    +      I  + + G +E A   + 
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMIS--SGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           EM+       +  Y I++ G    G +  A +    +V+       P+C
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASC---EPNC 770



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 178/711 (25%), Positives = 306/711 (43%), Gaps = 45/711 (6%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVS 98
           +P     FF   A+R   R  A++ A +  LL     P  +D                  
Sbjct: 65  DPATALAFFECVARRPGFRHTAASHAALLQLLARRRAPANYD------------------ 106

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY---IYNAVLNIAFRKQLFLLALAV 155
            +   +IS      D  +A+++   ++    +  V     YN  L    R  +      +
Sbjct: 107 KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           Y  +V+   LP+ VT++ +I    K G   +A +    + + G+  + +T   ++ G C+
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            +   +A  L + M   GC  +  +Y  L+ G C+ R V EAL L+     DG    L +
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHT 286

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI GL +  R  +A     +M    + P V  Y  MI G  ++G++KDA+ + + M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G  PD + YN+LI G C  G LD+A  L      R   P   TFT LI G C+   +D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA ++ + M  + C   +  +  LI+ L K   L++A     +M   G  P +       
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV------- 458

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +  ++++ YC  G++  A ++   +   G  P+  TY SLI G  +   ++ 
Sbjct: 459 -------VTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHK 511

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L  ++Q  G+ P  +TY TLI G  +    ++AFR+F  M QNG TP    Y  L  
Sbjct: 512 AMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTD 571

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C+  +   A+S  ++    ++     S+  ++ F + G  + A   + +M  +     
Sbjct: 572 ALCKSGRAEEAYSFLVRKGVVLTKVTYTSL--VDGFSKAGNTDFAAVLIEKMVNEGCKAD 629

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           L  Y++ L  LC+  ++ EAL+I   +          +   +I  + K G  D A  +F 
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + +G   +P    Y +    + K  +   A HL+  M+  G   D   Y
Sbjct: 690 EMISSGH--KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTY 738



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 165/656 (25%), Positives = 287/656 (43%), Gaps = 71/656 (10%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL----- 140
           LDE+    V      +  +I GY K G  + AL     M++  C PD + YN+++     
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 141 -NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
             +   ++L   A+A  +        P ++TF+ LING  K+ + + A+++   M     
Sbjct: 367 GKLDEAEELLNGAIARGFT-------PTVITFTNLINGYCKAERIDDALRVKSNMISSNC 419

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             +   Y ++I+ L +  R  EA     +M  +G +P+ V Y ++++G+CK+  V  AL 
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALE 479

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + +  E +G  P   +Y  LI GL + K+  +A A   KM E+ I P V+ Y  +I+G  
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC 539

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  +  +A +L   M + G+ PD   YN L    C  G  ++A S  V   ++  +    
Sbjct: 540 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKV 596

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA------- 432
           T+T L+ G  + G  D A  L  KM   GC   +  ++ L+  LCK  +L +A       
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 433 -------NLLFYKMEI------GKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
                  N++ Y + I      GK+    +LF  +   G++     +    +  YC  G 
Sbjct: 657 TVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP-SATTYTVFISSYCKIGR 715

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG- 535
           I +A  ++ ++   G  PD++TYN  ING   +G I+ A    K +      P+  TY  
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWL 775

Query: 536 --------TLIN-------GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
                   +LIN       G+         +++  +M ++G  P+   Y S++   C+  
Sbjct: 776 LLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK--------GEVENAIQGLLEMDFKLND 632
           +   A  L    L  + G+D    + I   L K        G+  + +  ++E  F+   
Sbjct: 836 RLEEACVL----LDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQP-- 889

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
            QL  Y   ++GLC +G    A ++F  L+         +   L  GL K G++D 
Sbjct: 890 -QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDF 944



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/569 (23%), Positives = 250/569 (43%), Gaps = 64/569 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I++L+K        +TL+E+ +  ++     +  +I GY KVG    ALE F  M+   
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+ + Y +++    + +    A+A+  +M +    P ++T++ LI G  K  + + A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL--------------------- 227
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   +                     
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 228 -----------KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                      KM + GC  D   Y+ LL   CK ++++EAL++L      G    + +Y
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  + +  ++D A + + +M     +P    Y V I    + G++++A  L+ +M  
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER 728

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD- 395
            G+ PD   YN  I G   +G +D+A S    +      PN  T+ +L+    +  +++ 
Sbjct: 729 DGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 396 ---DAQKLFN------------KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
              D   ++N            +M K G  P+V  ++++I G CKA  LE+A +L   M 
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM- 847

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +GK+             +     + TM ++  C   L  KA   +  + E G  P + +Y
Sbjct: 848 LGKD-------------ISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESY 894

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           + LI G C  G+ + A  LF +L       + V +  L +GL +    +   ++   M  
Sbjct: 895 HYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDN 954

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             C      Y S++T S R    S+   L
Sbjct: 955 RHCRIDSESY-SMLTDSIREASGSVVSEL 982



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 187/458 (40%), Gaps = 31/458 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERG---IVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           MI     A  V++A+  +  +R  G   +V    CYN  ++      + +    L   + 
Sbjct: 112 MISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLV 171

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +   LP+T T+  +I   C+ G +  A + F  + ++G        NAL+ G C+  +L 
Sbjct: 172 QEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLR 231

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           KA  L   M     P +  R         ++ S   +++  C A  + +A  ++  +   
Sbjct: 232 KACWLLMMM-----PLMGCR--------RNEYSYTILIQGLCEARCVREALVLVFMMVHD 278

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   ++ TY  LI G CK G I+ A  L  E+ L+G+ P   TY  +I+G  +  R +DA
Sbjct: 279 GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             I   M QNGC P    Y SL+   C  +       L     R  +         I  +
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGY 398

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIW---LIGLCQDGQVKEALNIFSVLVECKAI 667
            +   +++A++    M        L  Y +    LI  C+  + KE LN          +
Sbjct: 399 CKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNV 458

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS-KDNKKVH- 725
           VT  S   +I G CK G +  A++VF      G    P    Y   SL++    +KK+H 
Sbjct: 459 VTYTS---IIDGYCKVGMVGAALEVFKLMEHEG--CHPNAWTY--GSLIYGLIQDKKLHK 511

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
           A  L+ +M+  G       Y    +L+ G     E +N
Sbjct: 512 AMALITKMQEDGITPGVITY---TTLIQGQCKKHEFDN 546


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 247/495 (49%), Gaps = 19/495 (3%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    +I+   K G  + ALE F +M E    PDV  YN +++   +++   +A+ ++
Sbjct: 183 DVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLW 242

Query: 157 YEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            ++++ + + PN+ T +++I+GLSK G+ +  +K+ D M Q     + +TY+ +I GLC 
Sbjct: 243 DKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCD 302

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               D+A  +F ++ +     D V YN +L GFC+  ++ E+L L R  E+   V  + S
Sbjct: 303 EGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVS 361

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI GL    + DEA   +R M  +    D   YG+ I GL   G V  A+ ++ ++ 
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVE 421

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G   D Y Y ++I   C    L++A +L  E+ K     N+H    LI G+ R+  + 
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA  L   M K GC P+V  +N LI GLC+AG+  +A+    +M E G  P         
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKP--------- 532

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D  +   ++   C    I  A ++  Q  +SG  PD++ +N LI+G C VG ++ 
Sbjct: 533 -----DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ +   ++ +    + VTY TL+ G  +V     A  I+G M + G  P    Y +++ 
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILK 647

Query: 575 WSCRRRKFSLAFSLW 589
             C   + S A   +
Sbjct: 648 GLCLCHRVSYAIEFF 662



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 169/672 (25%), Positives = 287/672 (42%), Gaps = 94/672 (13%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
           LS   V  ++   KNP+  F  F  A    R   +A ++ V   +L+            +
Sbjct: 8   LSPKHVLKLLKSEKNPRAAFALFDSAT---RHPGYAHSAVVYHHILRRLSEARMVTHVGR 64

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            ++ +RS       DV   +I  Y K    ++AL+ F +M+E                  
Sbjct: 65  IVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREI----------------- 107

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                              C P I +++ L+N   ++ +      +       G+ PN  
Sbjct: 108 -----------------FGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQ 150

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY ++I   C+    ++A      M   G  PD  +Y+ ++N   K  ++D+AL L    
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEM 210

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEAGK 323
            +    P +  Y+ LIDG  + K +  A   + K+ E+  + P+V  + +MI GLS+ G+
Sbjct: 211 SERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGR 270

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V D +K+   M++     D Y Y++LI G CD G +D+A S+  E+ +R +  +  T+  
Sbjct: 271 VDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNT 330

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           ++ G CR G + ++ +L+  ME+      V  +N LI GL + G++++A           
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEQRNSVNIVS-YNILIKGLLENGKIDEA----------- 378

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
             T+  RL        D  +    +   C  G ++KA  ++ ++   G   D+  Y S+I
Sbjct: 379 --TMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASII 436

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  CK   +  A  L KE+   G+  +S     LI GL R  R  DA  +   M +NGC 
Sbjct: 437 DCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCL 496

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+   Y  L+   C   KF                   E+   ++E L+ G         
Sbjct: 497 PTVVSYNILICGLCEAGKFG------------------EASAFVKEMLENG--------- 529

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLC 681
           L+ D K        Y+I L GLC+D +++ AL ++   ++  + + P   +   LIHGLC
Sbjct: 530 LKPDLK-------TYSILLGGLCRDRKIELALELWHQFLQ--SGLEPDVMMHNILIHGLC 580

Query: 682 KRGYLDLAMDVF 693
             G LD AM V 
Sbjct: 581 SVGKLDDAMTVM 592



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 247/508 (48%), Gaps = 53/508 (10%)

Query: 220 DEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           D A  +F +M++  GC P   +YN LLN F + ++  +  +L   FE  G  P L +Y+ 
Sbjct: 95  DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI    + K +++A  +   M++E  +PDV  Y  +I  L++ GK+ DA++L  +M ER 
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR---DS--LPNTHTFTILICGMCRNGM 393
           + PD  CYN LI GF    L ++   + +++W +   DS   PN  T  I+I G+ + G 
Sbjct: 215 VAPDVTCYNILIDGF----LKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGR 270

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           VDD  K++++M++      +  +++LI GLC  G ++KA  +F ++   K    F+    
Sbjct: 271 VDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERK---AFI---- 323

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +  TM+  +C  G I ++ + L ++ E  N  +I++YN LI G  + G I+
Sbjct: 324 ------DVVTYNTMLGGFCRCGKIKESLE-LWRIMEQRNSVNIVSYNILIKGLLENGKID 376

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  +++ +  KG   D+ TYG  I+GL        A  +  ++   G       Y S++
Sbjct: 377 EATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASII 436

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C++R+   A +L    ++++S    E             V NA+ G L  D +L+D 
Sbjct: 437 DCLCKKRRLEEASNL----VKEMSKHGVE---------LNSHVCNALIGGLIRDSRLSDA 483

Query: 634 QL--------------APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            L                Y I + GLC+ G+  EA      ++E        +   L+ G
Sbjct: 484 SLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGG 543

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           LC+   ++LA++++   L++G  L P V
Sbjct: 544 LCRDRKIELALELWHQFLQSG--LEPDV 569



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 216/483 (44%), Gaps = 61/483 (12%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           +++ +IS L K    D   +  D ++          +  LI G    G+ +KA   F ++
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNEL 316

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E     DV  YN +L    R      +L ++  M + N + NIV++++LI GL ++GK 
Sbjct: 317 VERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKI 375

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A  +   M  +G   +  TY I I GLC     ++A  +  +++  G   D  AY ++
Sbjct: 376 DEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASI 435

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEE 302
           ++  CK RR++EA  L++   K G    L S+ C  LI GL R  R  +A    R M + 
Sbjct: 436 IDCLCKKRRLEEASNLVKEMSKHGV--ELNSHVCNALIGGLIRDSRLSDASLLMRGMGKN 493

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P VV Y ++I GL EAGK  +A   + +M E G+ PD   Y+ L+ G C     D+ 
Sbjct: 494 GCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCR----DRK 549

Query: 363 RSLQVEIWKR----DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
             L +E+W +       P+     ILI G+C  G +DDA  +   ME   C  ++  +N 
Sbjct: 550 IELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L++G  K  +  +A +++  M                                       
Sbjct: 610 LMEGYFKVRDSNRATVIWGYM--------------------------------------- 630

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
             YK+ +Q       PDII+YN+++ G C    ++ A++ F + +  G+ P   T+  L+
Sbjct: 631 --YKMGLQ-------PDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681

Query: 539 NGL 541
             +
Sbjct: 682 RAV 684



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 180/432 (41%), Gaps = 56/432 (12%)

Query: 290 DEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           D A   +++M E    EP +  Y  ++    EA +      L +     G+ P+   YN 
Sbjct: 95  DRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LIK  C     ++AR     +WK    P+  +++ +I  + + G +DDA +LF++M +  
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V  +N LIDG  K  +        +KM +     L+ +L +  +   +  +   M+
Sbjct: 215 VAPDVTCYNILIDGFLKEKD--------HKMAM----QLWDKLLEDSSVYPNVKTHNIMI 262

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
                 G +    KI  ++ ++    D+ TY+SLI+G C  GN++ A  +F EL  +   
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAF 322

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            D VTY T++ G                                    CR  K   +  L
Sbjct: 323 IDVVTYNTMLGGF-----------------------------------CRCGKIKESLEL 347

Query: 589 WLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           W    R +  R+  ++ S    I+  L+ G+++ A      M  K        Y I++ G
Sbjct: 348 W----RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHG 403

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           LC +G V +AL +   +      +   +   +I  LCK+  L+ A ++     K+G  L 
Sbjct: 404 LCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELN 463

Query: 705 PRVCNYLLRSLL 716
             VCN L+  L+
Sbjct: 464 SHVCNALIGGLI 475



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 2/193 (1%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           +VVS  + +LI G  + G   +A     +M E   +PD+  Y+ +L    R +   LAL 
Sbjct: 498 TVVS--YNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALE 555

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++++ ++    P+++  ++LI+GL   GK + A+ ++  M  R    N  TY  ++ G  
Sbjct: 556 LWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYF 615

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           ++  ++ A  ++  M   G  PD ++YN +L G C   RV  A+         G  P + 
Sbjct: 616 KVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVY 675

Query: 275 SYSCLIDGLFRAK 287
           +++ L+  +   K
Sbjct: 676 TWNILVRAVVNRK 688


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 170/680 (25%), Positives = 302/680 (44%), Gaps = 76/680 (11%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           +L+    D + + + SV+  V   LI      G  ++A +   + K     P +   N +
Sbjct: 131 NLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFL 190

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +N     +   +A+A+Y ++      PN  T+++ I G  + G    AI +  +M + G+
Sbjct: 191 MNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGV 250

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
            PN F+YT  I GLC   R+D  +++   + ++    D  AY  ++ GFC   ++ EA +
Sbjct: 251 TPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAES 310

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +LR  EK GF P +  Y  LI G        +A A + +M  + ++ + V+   +++GLS
Sbjct: 311 ILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLS 370

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR------- 372
           + G   +      + ++ GI  D  CYN ++   C LG +++A  L VE+  +       
Sbjct: 371 QMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDII 430

Query: 373 ----------------DSL------------PNTHTFTILICGMCRNGMVDDAQKLFNKM 404
                           D+L            P+  T+ +L  G  RNG+  +A  L N M
Sbjct: 431 NYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYM 490

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-------------------IGKNP 445
           E  G  P     N +I+GLC  G+++ A   F  +E                   + K  
Sbjct: 491 ETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAF 550

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            L +RLS+ G R+  KAS   ++   C+ G   KA  +L  +      P +I Y+ +I  
Sbjct: 551 ALLIRLSKQG-RILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGA 609

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             + G +  A  +F  L  +GL PD +TY  +ING  R+++ ++A+ + G M   G  P 
Sbjct: 610 LFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y  L+  +C +             LR  S   D +MKS E  +    + + ++   +
Sbjct: 670 VITYTVLLN-NCSKID-----------LRSSSSSLD-AMKSKENMMDPSALWSEMK---D 713

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           MD K +   +  YT+ +   C+   +++A+N+F+ +++        +   L+ G C  G 
Sbjct: 714 MDIKPD---VICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGN 770

Query: 686 LDLAMDVFLYTLKNGFILRP 705
           +  A+ +F   L  G  +RP
Sbjct: 771 IKKAVVLFDEMLNKG--IRP 788



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 258/572 (45%), Gaps = 53/572 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI     SG  + A  +L +    G  P   +   +++ L +  + D A  ++ ++K  G
Sbjct: 155 LIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFG 214

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            +P+   Y   + GFC+   + EA+ + R  E+ G  P   SY+  I+GL    R D  +
Sbjct: 215 LNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGF 274

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              + +   KI  DV  Y V+IRG     K+K+A  +L +M ++G  PD Y Y ALI G+
Sbjct: 275 KVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGY 334

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +G L +A +L  E+  +    N    + ++ G+ + GM  +    F + +K G F   
Sbjct: 335 CMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDE 394

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N ++D LCK G++E+A  L  +M             +G   V D  +  T++  Y  
Sbjct: 395 ACYNVVMDALCKLGKVEEAVELLVEM-------------KGKKMVPDIINYTTVISGYFL 441

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A  I  ++ + G+ PDI+TYN L  GF + G    AL L   ++ +G++PD+VT
Sbjct: 442 KGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVT 501

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           +  +I GL    + +DA   F  + +  C  +   Y +++   C     + AF+L ++  
Sbjct: 502 HNMIIEGLCIGGKVDDAQAFFDNLEEK-CLEN---YSAMVNGYCEANHVNKAFALLIRLS 557

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           +   GR           L+K              FKL           L  LC +G  ++
Sbjct: 558 K--QGR----------ILKKASF-----------FKL-----------LGNLCSEGDSEK 583

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           AL +   +V      T     K+I  L + G ++ A  VF   +  G  L P V  Y + 
Sbjct: 584 ALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG--LAPDVITYTIM 641

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              + + NK   A+H+L  MK+ G + D   Y
Sbjct: 642 INGYCRMNKMKEAWHVLGDMKNRGIEPDVITY 673



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 135/554 (24%), Positives = 252/554 (45%), Gaps = 34/554 (6%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           DL ++ L ++ +  + +    + V+I G+      ++A     +M++    PDVY+Y A+
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCAL 330

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           ++        L ALA++ EMV      N V  S ++ GLS+ G          E  + GI
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGI 390

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             ++  Y +V+  LC++ + +EA  L ++MK     PD + Y  +++G+    +V +AL 
Sbjct: 391 FFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + R  +  G  P + +Y+ L  G  R     EA +    M  + ++PD V + ++I GL 
Sbjct: 451 IYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLC 510

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
             GKV DA     ++ E+ +      Y+A++ G+C+   +++A +L + + K+  +    
Sbjct: 511 IGGKVDDAQAFFDNLEEKCLEN----YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKA 566

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           +F  L+  +C  G  + A  L   M      P++ M++ +I  L +AGE+EKA  +F  +
Sbjct: 567 SFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNML 626

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + G  P              D  +   M+  YC    + +A+ +L  +   G  PD+IT
Sbjct: 627 VDRGLAP--------------DVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVIT 672

Query: 499 YNSLINGFCKVG---------------NINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           Y  L+N   K+                N+     L+ E++   ++PD + Y  LI+   +
Sbjct: 673 YTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCK 732

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
            +  +DA  +F +M   G  P    Y +L++  C       A  L+ + L      D  +
Sbjct: 733 TNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHT 792

Query: 604 MKSIEEFLQKGEVE 617
           M  +   L+  +V 
Sbjct: 793 MSVLHCILKVRKVH 806



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/449 (21%), Positives = 177/449 (39%), Gaps = 84/449 (18%)

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN--------- 377
           A    + ++E G   D Y Y A+++  C  G   +  S+ +EI K+D   +         
Sbjct: 76  AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135

Query: 378 ------THTFTILI----------------------------CG--------------MC 389
                   +F++L+                            CG              + 
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
            +  VD A  ++ +++  G  P+   +   I G C+ G L +A  +F  M E G  P  F
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255

Query: 449 LRLS-QGGNRVHDKASL--------------------QTMVEQYCTAGLIHKAYKILMQL 487
              +   G  +H ++ L                      ++  +C+   + +A  IL ++
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G  PD+  Y +LI+G+C VGN+  AL L  E+  KG++ + V   +++ GL ++   
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMA 375

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
            +    F +  + G     A Y  +M   C+  K   A  L ++        D  +  + 
Sbjct: 376 SEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTV 435

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           I  +  KG+V +A+    EM    +   +  Y +   G  ++G  +EAL++ + + E + 
Sbjct: 436 ISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYM-ETQG 494

Query: 667 IVTPPSCVK--LIHGLCKRGYLDLAMDVF 693
            V P +     +I GLC  G +D A   F
Sbjct: 495 -VKPDTVTHNMIIEGLCIGGKVDDAQAFF 522



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 15/248 (6%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F   I  +K+ R+   AS   ++  L      +     L+ + + N++    ++  +I 
Sbjct: 549 AFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIG 608

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
             ++ G+ EKA   F  + +    PDV  Y  ++N   R      A  V  +M      P
Sbjct: 609 ALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEP 668

Query: 167 NIVTFSLLINGLSKS---------GKTEVAIKMLD------EMTQRGILPNKFTYTIVIS 211
           +++T+++L+N  SK             +    M+D      EM    I P+   YT++I 
Sbjct: 669 DVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLID 728

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ N   +A  LF +M D G +PD V Y ALL+G+C +  + +A+ L       G  P
Sbjct: 729 KHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRP 788

Query: 272 RLGSYSCL 279
              + S L
Sbjct: 789 DAHTMSVL 796


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 245/482 (50%), Gaps = 18/482 (3%)

Query: 62  SFASNSAVISMLLKPNGFD-LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           +FA N  + +  ++    D L W  L   R  N +VV+  F  +I+ + K G+  +A + 
Sbjct: 301 AFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT--FNTVINAFCKEGNVVEARKL 358

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F  +KE    P+  +YN ++N   + +    A  +Y EM K    P+ +TF++L++G  K
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+ E   ++L +++  G+LP++  + I +SGLC   R DEA    + M + G SP  +A
Sbjct: 419 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 478

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           +N+++  + +    D+A    +     G  P   + S L+ GL    R  EA     +M 
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E+ +  + + + V++    + G V  A  L  +M  RGI PD   ++A I G    GL++
Sbjct: 539 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 598

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A ++ +E+ ++  +PN   +  LICG C+ G +++A KL   M   G  P +   N +I
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 658

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            GLCK G +  A  +F  M + G +P              D  +  T++  YC A  +  
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSP--------------DIITYNTLINGYCKAFDMVN 704

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  ++ ++  SG+ PD+ TYN  I+GFC    +N A+ +  EL   G+ P++VTY +++N
Sbjct: 705 ADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLN 764

Query: 540 GL 541
           G+
Sbjct: 765 GV 766



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 281/630 (44%), Gaps = 50/630 (7%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L  +R   V   +    +L     +VGD     + F  +     QP  Y ++ ++   
Sbjct: 217 EILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGF 276

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            RK    L  ++ + M K +C PN   ++++IN     G+T  A+   + M +RG  P  
Sbjct: 277 CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 336

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  VI+  C+     EA +LF  +K+ G SP+ + YN L+NG+ K+R +D+A  L   
Sbjct: 337 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 396

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K G  P   +++ L+ G ++  R ++     + +    + PD  L+ + + GL  AG+
Sbjct: 397 MRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGR 456

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + +AM+ L DM E+G+ P    +N++I  +   GL D+A      +      P+  T + 
Sbjct: 457 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 516

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IG 442
           L+ G+  NG + +A +L  +M + G   +   F  L+D   K G++  A  L+ +ME  G
Sbjct: 517 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 576

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P              D  +    ++     GL+ +AY + +++   G +P+   YNSL
Sbjct: 577 IFP--------------DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 622

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I GFCK G +N ALKL K ++ +GL PD  T   +I GL +  R   A  +F  M Q G 
Sbjct: 623 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 682

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           +P    Y +L+   C+      AF                            ++ NA   
Sbjct: 683 SPDIITYNTLINGYCK------AF----------------------------DMVNADNL 708

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +  M    ++  L  Y I + G C   ++  A+ +   LV    +    +   +++G+C 
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS 768

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
              LD AM +    LK  F+      N LL
Sbjct: 769 -DILDRAMILTARLLKMAFVPNVVTANLLL 797



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 235/535 (43%), Gaps = 31/535 (5%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           DF   ++L+  F       +AL +L    + G  P     + L   L R   Y   +  +
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           + +     +P    +  +I G    G +     LL  M +    P+ + YN +I   C  
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G    A +    + +R   P   TF  +I   C+ G V +A+KLF+ +++ G  P+  M+
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 417 NALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---------GNR------- 457
           N L++G  K  E+++AN+L+ +M    I  +   F  L  G         G+R       
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 458 ---VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              + D++     V   C AG + +A + LM + E G  P II +NS+I  + + G  + 
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A + +K +   GL P   T  +L+ GL    R ++A  + GQM + G + +   +  L+ 
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK---L 630
              +R     A SLW +  R     D  +  + I+   ++G VE A    LEM  K    
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           N+F    Y   + G C+ G++ EAL +  V+     +    +   +I GLCK+G +  A+
Sbjct: 615 NNF---AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +VF+   + G  L P +  Y      + K    V+A +L+ RM + G + D   Y
Sbjct: 672 NVFMDMHQTG--LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTY 724



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 1/290 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G    G  ++A E  G+M E     +   +  +L+  F++   + A +++ EM +  
Sbjct: 517 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 576

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++V FS  I+GLSK G  E A  +  EM ++G++PN F Y  +I G C+  + +EA 
Sbjct: 577 IFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEAL 636

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L   M+  G  PD    N ++ G CK  R+  A+ +     + G  P + +Y+ LI+G 
Sbjct: 637 KLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGY 696

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +A     A     +M+     PD+  Y + I G   + ++  A+ +L ++   GIVP+T
Sbjct: 697 CKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNT 756

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
             YN+++ G C   +LD+A  L   + K   +PN  T  +L+    + GM
Sbjct: 757 VTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGM 805



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 174/398 (43%), Gaps = 49/398 (12%)

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           E D  +   ++R    A     A+++L  MRE G+ P       L K    +G       
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++ +R   P  +TF+ +I G CR G +   + L + M K  C P+   +N +I+  C
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
             G    A   F  M E G NPT+               +  T++  +C  G + +A K+
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTV--------------VTFNTVINAFCKEGNVVEARKL 358

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              L E G  P+ I YN+L+NG+ K+  I+ A  L++E++ KG+ PD +T+  L++G  +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             REED  R+   +   G  P  +++   ++  C           W       +GR DE+
Sbjct: 419 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC-----------W-------AGRLDEA 460

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           M+ + + L+KG   + I          N   +A Y+       Q G   +A   + ++V 
Sbjct: 461 MEFLMDMLEKGLSPSII--------AFNSV-IAAYS-------QAGLEDKAFEAYKLMVH 504

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
                +P +C  L+ GL   G L  A ++    ++ G 
Sbjct: 505 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL 542


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 164/653 (25%), Positives = 302/653 (46%), Gaps = 47/653 (7%)

Query: 39  MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           +K +N ++G  F     KR    +    + +I  L +        +  DE+   N+++V 
Sbjct: 187 VKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM--CNINLVG 244

Query: 99  DV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            +  +  LI GY KVG+ + A +   +MKE    P++  +N++L+   + +    A ++ 
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLL 304

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM     +P+  T+S+L +GL +      A+++ ++ T++GI  N +T +I+++GLC+ 
Sbjct: 305 KEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQ 364

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            + ++A  +  K  ++G   D V YN  +NG+C++  +++A+  +   E  G  P   ++
Sbjct: 365 GKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITF 424

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID     K  D+A  W +KM E+ + P V  Y  +I G  +        ++L  M E
Sbjct: 425 NSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEE 484

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P+   Y +LI   C  G + +A  +  ++  R  LPN   + +LI G C  G V D
Sbjct: 485 IGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TLFL 449
           A + F++M ++   P++  +N LIDGLCK G+L +A + L      G +P      +L  
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLIS 604

Query: 450 RLSQGGNRVHDKASLQTM--------VEQY------CTAGLIHKAYKILMQLAESGNLPD 495
             +  GN        +TM        V  Y      C+   I    K+  ++ +   LPD
Sbjct: 605 GYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPD 664

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            + YN++I+ + ++GN   A  L + +  +G+ PD +TY +LI G  R  +  +   +  
Sbjct: 665 RVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVN 724

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M      P    Y  L+   C  + FS A+  + + + +              FL    
Sbjct: 725 NMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVEN-------------NFLPNAS 771

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           + N +   LE + +L + Q+         +C +  VK  +N +    E  A+ 
Sbjct: 772 ICNELTAGLEQEGRLQEVQV---------ICSEMNVKGIINHWPSKEEISAVA 815



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 289/633 (45%), Gaps = 67/633 (10%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           K ++ F +++    + D ++Y   +  A + Q   + +     M K    PN+  +++LI
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL +  +   A KM DEM    ++ +  TY  +I G C++   D A+++  +MK+   +
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ + +N+LL+G CK+R++ EA +LL+  E +GF+P   +YS L DGL R    + A   
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT---------YC- 345
           Y +  E+ I  +     +++ GL + GKV+ A ++L    E G+V D          YC 
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 346 -------------------------YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
                                    +N+LI  FCD+  +D+A     ++ ++   P+  T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           +  LI G  +    D   ++  +ME+ G  P+V  + +LI+ LCK G++ +A ++   M 
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518

Query: 440 --EIGKNPTLFLRLSQGG---NRVHDK----------------ASLQTMVEQYCTAGLIH 478
              +  N  ++  L  G     +V D                  +   +++  C  G + 
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A   L Q+  SG+ PD+ITYNSLI+G+   GN++  L L++ ++  G++P   TY  LI
Sbjct: 579 EAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +G  + +  E   +++ +M Q    P   VY +++           A+SL    L     
Sbjct: 639 SGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIH 697

Query: 599 RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKE 653
            D  +  S I    ++G++ N    +  M  K    +LAP    Y I + G C       
Sbjct: 698 PDKMTYNSLILGHFREGKLSNIKDLVNNMKAK----ELAPKADTYDILVKGHCDLKDFSG 753

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
           A   +  +VE   +     C +L  GL + G L
Sbjct: 754 AYVWYREMVENNFLPNASICNELTAGLEQEGRL 786



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/548 (23%), Positives = 252/548 (45%), Gaps = 24/548 (4%)

Query: 188 IKMLD---EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           +K++D   E+   G   + F Y   I    ++            M+  G  P+   YN L
Sbjct: 158 VKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVL 217

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C+ +R+ +A  +         V  + +Y+ LIDG  +    D A+    +M E+ +
Sbjct: 218 IGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF--CDLGLLDQA 362
            P+++ +  ++ GL +  K+K+A  LL +M   G +PD Y Y+ L  G   CD G  + A
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGA 335

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  +  ++    N +T +IL+ G+C+ G V+ A+++  K  + G      ++N  ++G
Sbjct: 336 MELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNG 395

Query: 423 LCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            C+ G++ KA L   +ME  G  P              +  +  ++++++C    + KA 
Sbjct: 396 YCRIGDMNKAILTIERMESFGLRP--------------NSITFNSLIDKFCDMKEMDKAE 441

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           + + ++AE G  P + TYN+LI+G+ K+   +   ++ ++++  G++P+ V+YG+LIN L
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRD 600
            +  +  +A  +   M   G  P+  VY  L+  SC   K   A   + + +R +IS   
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTL 561

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
                 I+   +KG++  A   L ++    +   +  Y   + G    G V + L ++  
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYET 621

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           +       T  +   LI G  K G ++L   ++   L+   +    V N ++       +
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680

Query: 721 NKKVHAYH 728
            +K ++ H
Sbjct: 681 TQKAYSLH 688


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 183/705 (25%), Positives = 300/705 (42%), Gaps = 107/705 (15%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ GY + G+  KA   F  M    CQ + Y Y  ++      +    AL ++  M + 
Sbjct: 223 ALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRD 282

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN+  F+ LI+GL KSG+   A  + D M Q G++P+  TY  +I G  ++ R ++A
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++   M+ +GC PD   YN L+ G C  ++ +EA  LL +  K+GF P + +++ LI+G
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLING 401

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              A+++D+A     KM   K + D+ ++G +I  L +  ++K+A +LL+++   G+VP+
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 343 TYCYNALIKGFCDLGLLDQARSL---------QVEIWKRDSL------------------ 375
              Y ++I G+C  G +D A  +         Q   W  +SL                  
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 376 --------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                   PN  T+T L+ G C     D+A +LF  ME+ G  P    +  L D LCKAG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 428 ELEKANLLFYKMEIGKNPTLFLRL----SQGGNRVHDKASLQTMVEQYCT------AGLI 477
             E+A     +  +      +  L    S+ GN       ++ M+++ CT      + L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 478 HK---------------------------AYKILM-----------------QLAESGNL 493
           H                            AY IL+                 ++  SG+ 
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P   TY   IN +CK G +  A  L  +++ +G+ PD VTY  LI+G   +   + AF  
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 554 FGQMPQNGCTPSPAVY----KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--- 606
             +M    C P+   Y    K L+  +    +      +W     DI+ +  E M     
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 607 ----------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
                     I  F + G +E A   L  M  K        YT+ +   C     ++AL+
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             S++ EC       S   L+ GLC  G  +    +F   L+ G+
Sbjct: 882 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGY 926



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 188/708 (26%), Positives = 306/708 (43%), Gaps = 41/708 (5%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL--DELRSGNVSVVSDVF 101
           P     FF W A+R   R  A + A +  LL        ++ L    L   + +    V 
Sbjct: 70  PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
              I    + G    AL            P  Y  N  L    R  +      VY ++V+
Sbjct: 130 ADAIQAIRRTGSARLAL-----------SPKCY--NFALRSLARFDMTEYMGRVYSQLVQ 176

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              LP+ VT++ +I    K G    A +    + + G+ P  FT   ++ G C+     +
Sbjct: 177 DGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRK 236

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  LFL M   GC  +  +Y  L+ G C+ + V EAL L    ++DG  P + +++ LI 
Sbjct: 237 ACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL ++ R  +A   +  M +  + P V+ Y  MI G S+ G++ DA+K+   M + G  P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D + YN LI G CD    ++A  L     K    P   TFT LI G C     DDA ++ 
Sbjct: 357 DDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           NKM  + C   + +F  LI+ L K   L++A  L    EI  N             V + 
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN--EISAN-----------GLVPNV 462

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++ YC +G +  A ++L  +   G  P+  TYNSL+ G  K   ++ A+ L  +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +Q  G+ P+ +TY TL+ G       ++AFR+F  M QNG  P    Y  L    C+  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP---- 637
              A+S  ++  + ++         I+ F + G  + A   L+E   ++ D    P    
Sbjct: 583 AEEAYSFIVR--KGVALTKVYYTTLIDGFSKAGNTDFAAT-LIE---RMIDEGCTPDSYT 636

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y++ L  LC+  ++ EAL I   +       T  +   LI  + + G  D A  ++    
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +G   +P    Y +    + K+ +   A  L+ +M+  G   D   Y
Sbjct: 697 SSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 244/549 (44%), Gaps = 61/549 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I+ L+K +      + L+E+ +  +      +  +I GY K G  + ALE    M+   
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQP+ + YN+++    + +    A+A+  +M K   +PN++T++ L+ G       + A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK-------------------- 228
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   ++                    
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 229 ------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                       M D GC+PD   Y+ LL+  CK +R++EAL +L      G    + +Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID + R  ++D A   Y +M     +P    Y V I    + G+++DA  L+  M  
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------ 390
            G+ PD   YN LI G   +G +D+A S    +      PN  T+ +L+  + +      
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 391 -----NGM-----VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                +GM     +D   +L  +M K G  P+V  +++LI G CKAG LE+A LL   M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM- 851

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                       +G +   D  +L  +++  C      KA   +  ++E G  P + +Y 
Sbjct: 852 ----------CGKGLSPNEDIYTL--LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            L+ G C  G+      LF +L   G   D V +  L +GL +    +  F++   M + 
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959

Query: 561 GCTPSPAVY 569
            C  S   Y
Sbjct: 960 YCCISSQTY 968



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 136/334 (40%), Gaps = 16/334 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  L K    +     LD++    +      + +LI    + G  + A   + +M  
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P    Y   +N   ++     A  +  +M +    P++VT+++LI+G    G  + 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 187 AIKMLDEMTQRGILPNKFTYTIVI----------------SGLCQINRADEAYRLFLKMK 230
           A   L  M      PN +TY +++                SG+  +   D  ++L  +M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G +P    Y++L+ GFCK  R++EA  LL      G  P    Y+ LI      K ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A ++   M E   +P +  Y +++ GL   G  +    L  D+ E G   D   +  L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            G    G +D    +   + KR    ++ T+ ++
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971



 Score = 46.2 bits (108), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 3/180 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D+ WQ L+ +    ++     +  LI+G+ K G  E+A      M      P+  IY  
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++      + F  AL+    M +    P + ++ LL+ GL   G  E    +  ++ + G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
              ++  + I+  GL +    D  +++   M+   C      Y  + N   K+  V  +L
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 982


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 277/589 (47%), Gaps = 27/589 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LR   + + +     L+ GY +  D  KA      M    C+ + Y Y  ++   +  + 
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARC 264

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL + + MV+  C  N+  ++LLI GL K G+   A  +LDEM  RG++P+ +TY  
Sbjct: 265 VREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C+  R  +A  +   M+ +GC+PD   YN+L+ G C   ++DEA  LL      G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARG 383

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           F P + +++ LI+G  +A+R D+A      M     + D+  YGV+I  L +  ++K+A 
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAK 443

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           + L++M   G+ P+   Y ++I G+C +G++  A  +   +      PN  T+  LI G+
Sbjct: 444 ETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL 447
            ++  +  A  L  KM++ G  P V  +  LI G CK  E + A  LF  ME  G  P  
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTP-- 561

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D+ +   + +  C +G   +AY  L++    G +   +TY SL++GF 
Sbjct: 562 ------------DEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFS 606

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN + A  L +++  +G + D  TY  L+  L +  +  +A  I  QM  +G   +  
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLL 624
            Y  +++   +  K   A SL+ + +   SG    +      I  + + G++E A   + 
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMIS--SGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           EM+       +  Y I++ G    G +  A +    +V+       P+C
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASC---EPNC 770



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 177/711 (24%), Positives = 305/711 (42%), Gaps = 45/711 (6%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVS 98
           +P     FF W A+R   R  A++ A +  LL     P  +D                  
Sbjct: 65  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYD------------------ 106

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY---IYNAVLNIAFRKQLFLLALAV 155
            +   +IS      D  +A+++   ++    +  V     YN  L    R  +      +
Sbjct: 107 KLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           Y  +V+   LP+ VT++ +I    K G   +A +    + + G+  + +T   ++ G C+
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            +   +A  L + M   GC  +  +Y  L+ G  + R V EAL L+    +DG    L  
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHM 286

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI GL +  R  +A     +M    + P V  Y  MI G  ++G++KDA+ + + M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G  PD + YN+LI G C  G LD+A  L      R   P   TFT LI G C+   +D
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA ++ + M  + C   +  +  LI+ L K   L++A     +M   G  P + +  S  
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS-- 463

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                       +++ YC  G++  A ++   +   G  P+  TY SLI G  +   ++ 
Sbjct: 464 ------------IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHK 511

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L  ++Q  G+ P  + Y TLI G  +    ++AFR+F  M +NG TP    Y  L  
Sbjct: 512 AMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTD 571

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C+  +   A+S  ++    ++     S+  ++ F + G  + A   + +M  +     
Sbjct: 572 ALCKSGRAEEAYSFLVRKGVVLTKVTYTSL--VDGFSKAGNTDFAAVLIEKMVNEGCKAD 629

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           L  Y++ L  LC+  ++ EAL+I   +          +   +I  + K G  D A  +F 
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFN 689

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + +G   +P    Y +    + K  +   A HL+  M+  G   D   Y
Sbjct: 690 EMISSGH--KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 257/577 (44%), Gaps = 51/577 (8%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL----- 140
           LDE+    V      +  +I GY K G  + AL     M++  C PD + YN+++     
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366

Query: 141 -NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
             +   ++L   A+A  +        P ++TF+ LING  K+ + + A+++   M     
Sbjct: 367 GKLDEAEELLNGAIARGFT-------PTVITFTNLINGYCKAERIDDALRVKSNMISSNC 419

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             +   Y ++I+ L +  R  EA     +M  +G +P+ V Y ++++G+CK+  V  AL 
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALE 479

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + +  E +G  P   +Y  LI GL + K+  +A A   KM E+ I P V+ Y  +I+G  
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC 539

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  +  +A +L   M + G+ PD   YN L    C  G  ++A S  V   ++  +    
Sbjct: 540 KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKV 596

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+T L+ G  + G  D A  L  KM   GC   +  ++ L+  LCK  +L +A  +  +M
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            +              N V     +  M+++    G    A  +  ++  SG+ P   TY
Sbjct: 657 TVSGVKC---------NIVAYTIIISEMIKE----GKHDHAKSLFNEMISSGHKPSATTY 703

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
              I+ +CK+G I  A  L  E++  G+ PD VTY   ING   +   + AF    +M  
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVD 763

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             C P+   Y  L+       K  L  SL   +  D SG     M +  E        N 
Sbjct: 764 ASCEPNCWTYWLLL-------KHFLKMSLINAHYIDTSG-----MWNWIEL-------NT 804

Query: 620 IQGLLE--MDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
           +  LLE  M   LN   +  Y+  + G C+  +++EA
Sbjct: 805 VWQLLERMMKHGLNP-TVVTYSSIIAGFCKATRLEEA 840



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/569 (23%), Positives = 244/569 (42%), Gaps = 64/569 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I++L+K        +TL+E+ +  ++    ++  +I GY KVG    ALE F  M+   
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P+ + Y +++    + +    A+A+  +M +    P ++ ++ LI G  K  + + A 
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL--------------------- 227
           ++ + M + G+ P++  Y ++   LC+  RA+EAY   +                     
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 228 -----------KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                      KM + GC  D   Y+ LL   CK ++++EAL++L      G    + +Y
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  + +  ++D A + + +M     +P    Y V I    + G++++A  L+ +M  
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI----------- 385
            G+ PD   Y+  I G   +G +D+A S    +      PN  T+ +L+           
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 386 -----CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                 GM     ++   +L  +M K G  P+V  ++++I G CKA  LE+A +L   M 
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                         G  +     + TM ++  C   L  K    +  + E G  P + +Y
Sbjct: 849 --------------GKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESY 894

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           + LI G C  G+ + A  LF +L       + V +  L +GL +    +   ++   M  
Sbjct: 895 HYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDN 954

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             C      Y S++T S R    S+   L
Sbjct: 955 RHCRIDSESY-SMLTDSIREASGSVVSEL 982


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 261/546 (47%), Gaps = 26/546 (4%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N +++S        +   + A+ + + + +R   P  F +  ++  L +         L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            KM+  G  P+ V  N L+N FC+L  +  A ++     K G+VP   +++ LI GL   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            +  +A+ ++ K+       D + YG +I GL + G+ + A+ LL  +    + P+   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N +I   C + L+++A  L  E+  +   P+  T++ LI G C  G ++DA  LFNKM  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
               P V  FN L++  CK G++++   +F   M+ G  P                 +  
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF--------------VTYN 334

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++ YC    ++KA  I   +A+ G  PDI +Y+ +INGFCK+   + A+ LFKE+  K
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            + PD VTY +LI+GL +  R   A ++  QM   G  P+   Y S++   C+  +   A
Sbjct: 395 NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKA 454

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTI 640
            +L L  L+D   + +    S  I+   Q G++E+A    +GLL     LN   +  YTI
Sbjct: 455 IAL-LTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLN---VDTYTI 510

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C +G   EAL + S + +   I    +   +I  L K+   D+A  +    +  G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570

Query: 701 FILRPR 706
             +RPR
Sbjct: 571 --VRPR 574



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 219/431 (50%), Gaps = 48/431 (11%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI G  KVG+   AL+   ++     QP+V +YN +++   + +L   A  ++ EM+  
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISK 254

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT+S LI+G    GK   AI + ++M    I P+ +T+ I+++  C+  +  E 
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F  M   G  P+FV YN+L++G+C ++ V++A ++  +  + G  P + SYS +I+G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + K++DEA   +++M  + I PDVV Y  +I GLS++G++  A++L+  M +RG+ P 
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN+++   C +  +D+A +L  ++  +   PN +T++ILI G+C++G ++DA+K+F 
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE 494

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +   G   +V  +  +I G C  G   +A  L  KME                      
Sbjct: 495 GLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKME---------------------- 532

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                                     ++G +PD  TY  +I    K    + A KL +E+
Sbjct: 533 --------------------------DNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566

Query: 523 QLKGLRPDSVT 533
             +G+RP  + 
Sbjct: 567 IARGVRPRQIA 577



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 239/483 (49%), Gaps = 13/483 (2%)

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           + ++   D + A+  F ++   +  P  + +N +L    + + +   L +  +M      
Sbjct: 58  TTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 117

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+V  ++LIN   + G    A  +  ++ + G +P+  T+T +I GLC   +  +A+  
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLF 177

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             K+   G   D ++Y  L++G CK+     AL LL+  + +   P +  Y+ +ID + +
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            K  +EA+  + +M  + I PDVV Y  +I G    GK+ DA+ L + M    I PD Y 
Sbjct: 238 VKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N L+  FC  G + + +++   + K+   PN  T+  L+ G C    V+ A+ +FN M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + G  P +  ++ +I+G CK  + ++A  LF +M                N + D  +  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-------------HRKNIIPDVVTYS 404

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++    +G I  A +++ Q+ + G  P I TYNS+++  CK+  ++ A+ L  +L+ K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G++P+  TY  LI GL +  + EDA ++F  +   G   +   Y  ++   C    F+ A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 586 FSL 588
            +L
Sbjct: 525 LAL 527



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 243/484 (50%), Gaps = 20/484 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ + ++G    A   F K+ +    PD   +  ++     K     A   + ++V L
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               + +++  LI+GL K G+T  A+ +L  +    + PN   Y  +I  +C++   +EA
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + LF +M   G SPD V Y+AL++GFC L ++++A+ L      +   P + +++ L++ 
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +  +  E    +  M ++ I+P+ V Y  ++ G     +V  A  + + M + G+ PD
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ +I GFC +   D+A +L  E+ +++ +P+  T++ LI G+ ++G +  A +L +
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G  P++  +N+++D LCK  +++KA  L  K+ + G  P ++             
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY------------- 471

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  C +G +  A K+   L   G+  ++ TY  +I GFC  G  N AL L  +
Sbjct: 472 -TYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++  G  PD+ TY  +I  L + D  + A ++  +M   G  P     + +  W  ++++
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP-----RQIAIWFQKKKE 585

Query: 582 FSLA 585
           + ++
Sbjct: 586 YDVS 589



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 178/334 (53%), Gaps = 4/334 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDL+ + + +  S +V   S     LISG+  +G    A++ F KM   + +PDVY +N
Sbjct: 244 AFDLFSEMISKGISPDVVTYS----ALISGFCILGKLNDAIDLFNKMILENIKPDVYTFN 299

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            ++N   +         V+  M+K    PN VT++ L++G     +   A  + + M Q 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ P+  +Y+I+I+G C+I + DEA  LF +M      PD V Y++L++G  K  R+  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L+      G  P + +Y+ ++D L +  + D+A A   K+ ++ I+P++  Y ++I+G
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L ++GK++DA K+   +  +G   +   Y  +I+GFC  GL ++A +L  ++     +P+
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             T+ I+I  + +    D A+KL  +M   G  P
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 7/268 (2%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+   K   FD       E+   N+      +  LI G  K G    AL+   +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    P +  YN++L+   +      A+A+  ++      PN+ T+S+LI GL +SGK 
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A K+ + +  +G   N  TYTI+I G C     +EA  L  KM+D+GC PD   Y  +
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +    K    D A  LLR     G  PR       I   F+ K+  +  +  + + E+ +
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGVRPR------QIAIWFQKKKEYDVSSEPKTLTEQSV 600

Query: 305 EPDVVLYGVMI-RGLSEAGKVKDAMKLL 331
                ++G++I  G+   G V + + L 
Sbjct: 601 PKFKAMFGLVICDGMEWNGVVHNYIPLF 628


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 180/708 (25%), Positives = 313/708 (44%), Gaps = 96/708 (13%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S  S  + +L+    +    E AL  FG++     + D+ I N +L      +    AL
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIVI 210
            +  +   +L C+P++ ++S+L+  L   GK+  A  +L  M + G +  P+   Y  VI
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G  +    ++A  LF +M   G  PDFV Y+++++  CK R +D+A A LR     G +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+ LI G     ++ EA   +++M  + I PDVV + +++  L + GK+K+A  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 331 LSDMRERGIVPDTYCYN-----------------------------------ALIKGFCD 355
              M  +G  PD + YN                                    LIK + +
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G+LD+A  +  E+      PN  T+T +I  +CR G +DDA + FN+M   G  P    
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 416 FNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGN-----RVHDKASL----- 464
           ++ LI G C  G L KA  L  + M  G +  + L  S   N     RV D  ++     
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 465 -----------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                        +++ YC  G + KA ++   +  +G  P+ + Y +L+NG+CK+G I+
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             L LF+E+  KG++P ++ Y  +I+GL    R   A   F +M ++G   +   Y  ++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
               + R F  A  L+ +                               L  M+ K++  
Sbjct: 647 RGLFKNRCFDEAIFLFKE-------------------------------LRAMNVKIDII 675

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L      + G+ Q  +V+EA ++F+ +     +    +   +I  L K G ++ A D+F
Sbjct: 676 TL---NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMF 732

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
                 G     R+ N+++R LL  K N+ V A   L ++    + L+
Sbjct: 733 SSMQNAGCEPDSRLLNHVVRELL--KKNEIVRAGAYLSKIDERNFSLE 778



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/557 (28%), Positives = 255/557 (45%), Gaps = 27/557 (4%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   D +  N LL GFC+ +R DE
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      PDVV Y  
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L  +M +RGI PD   Y++++   C    +D+A +   ++  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LPN  T+  LI G    G   +A ++F +M +    P V  FN L+  LCK G++++A 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S   M+  Y T G +     +   +   G 
Sbjct: 345 DVFDTMAMKGQNPDVF--------------SYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P I T+N LI  +   G ++ A+ +F E++  G++P+ +TY T+I  L R+ + +DA  
Sbjct: 391 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L  + + +    D     SI   L 
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLA-PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           K G V +A Q + ++   +     A  Y++ + G C  G++++AL +F  +V   A + P
Sbjct: 511 KLGRVMDA-QNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEP 567

Query: 671 PSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              V   L++G CK G +D  + +F   L+ G      + N ++  L   +  + V A  
Sbjct: 568 NDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF--EAGRTVPAKV 625

Query: 729 LLCRMKSVGYDLDACLY 745
               M   G  ++ C Y
Sbjct: 626 KFHEMTESGIAMNKCTY 642



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 177/355 (49%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   V      +  +I+   ++G  + A+E F +M +    PD Y Y+ ++     
Sbjct: 417 FNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCT 476

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               L A  +  E++      +IV FS +IN L K G+   A  + D     G+ P    
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVV 536

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y++++ G C + + ++A R+F  M  +G  P+ V Y  L+NG+CK+ R+DE L+L R   
Sbjct: 537 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREML 596

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P    Y+ +IDGLF A R   A   + +M E  I  +   Y +++RGL +     
Sbjct: 597 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 656

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L  ++R   +  D    N +I G      +++A+ L   I +   +P   T++I+I
Sbjct: 657 EAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
             + + G+V++A+ +F+ M+ AGC P   + N ++  L K  E+ +A     K++
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKID 771



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/491 (24%), Positives = 218/491 (44%), Gaps = 22/491 (4%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           F + S+V+  L K    D     L ++ +  V   +  +  LI GY   G  ++A+  F 
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M+     PDV  +N ++    +      A  V+  M      P++ ++++++NG +  G
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                  + D M   GI P   T+ ++I         D+A  +F +M+D G  P+ + Y 
Sbjct: 374 CLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYT 433

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++   C++ ++D+A+         G  P   +Y CLI G        +A     ++   
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNN 493

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            +  D+VL+  +I  L + G+V DA  +       G+ P    Y+ L+ G+C +G +++A
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             +   +      PN   +  L+ G C+ G +D+   LF +M + G  PS  ++N +IDG
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613

Query: 423 LCKAGELEKANLLFYKME---IGKNPTLFLRLSQG--GNRVHDKA--------------- 462
           L +AG    A + F++M    I  N   +  + +G   NR  D+A               
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673

Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +L TM+        + +A  +   ++ SG +P ++TY+ +I    K G +  A  +F 
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733

Query: 521 ELQLKGLRPDS 531
            +Q  G  PDS
Sbjct: 734 SMQNAGCEPDS 744



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 35/254 (13%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D + S  +     V+  L++GY K+G  ++ L  F +M +   +P   +YN      
Sbjct: 555 RVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN------ 608

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                                        ++I+GL ++G+T  A     EMT+ GI  NK
Sbjct: 609 -----------------------------IIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY+IV+ GL +    DEA  LF +++      D +  N ++ G  + RRV+EA  L  S
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G VP + +YS +I  L +    +EA   +  M     EPD  L   ++R L +  +
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759

Query: 324 VKDAMKLLSDMRER 337
           +  A   LS + ER
Sbjct: 760 IVRAGAYLSKIDER 773


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 176/699 (25%), Positives = 307/699 (43%), Gaps = 58/699 (8%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W  L E+    +      F +LI+     G  +K+     KM++    P +  YN VL+ 
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +K  F  A+ +   M       ++ T+++LI+ L +S ++     +L +M +R I PN
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           + TY  +++G     +   A +L  +M   G SP+ V +NAL++G        EAL +  
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             E  G +    SY  L+DGL +   +D A  +Y +M    +    + Y  MI GL + G
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            + +A+ +L++M + GI PD   Y+ALI GFC +G L  A+ +   I++    PN   ++
Sbjct: 418 FLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYS 477

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI   CR G + +  +++  M   G  P    FN L+  LCKAG++ +A          
Sbjct: 478 TLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE--------- 528

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                F+R       + +  S   ++  Y ++G   KA+ +  ++ + G+ P   TY SL
Sbjct: 529 ----EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           + G CK G++  A K  K LQ      D+V   TLI  + +    + A  +FG+M Q   
Sbjct: 585 LKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAF----------------------------------SL 588
            P    Y SL++  CR+ K  +A                                     
Sbjct: 645 LPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGF 704

Query: 589 WLQYLRDISG--RDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
           + +   D  G  RD  +  + I+ + + G++E     L EM  +     L  Y I L G 
Sbjct: 705 YFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGY 764

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            +   V  +  ++  ++    +    +C  +I G+C+   L++ + +        FI R 
Sbjct: 765 SKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKIL-----KAFICRG 819

Query: 706 RVCNYLLRSLLFSK--DNKKVH-AYHLLCRMKSVGYDLD 741
              +    ++L SK   N +++ A+ ++  M S+G  LD
Sbjct: 820 VEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLD 858



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 186/747 (24%), Positives = 313/747 (41%), Gaps = 108/747 (14%)

Query: 59   RLRSFASNSAVISMLLKPNGFD------LYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            R R    N    + LL  NGF       +  Q L+E+ +  +S     F  LI G+   G
Sbjct: 290  RKRMIHPNEVTYNTLL--NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEG 347

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            + ++AL+ F  M+          Y  +L+   +   F LA   Y  M +       +T++
Sbjct: 348  NFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 407

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD------------ 220
             +I+GL K+G  + A+ ML+EM++ GI P+  TY+ +I+G C++ R              
Sbjct: 408  GMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRV 467

Query: 221  -----------------------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                                   E  R++  M   G +PD   +N L+   CK  +V EA
Sbjct: 468  GLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEA 527

Query: 258  LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
               +R    DG +P   S+ CLI+G   +    +A++ + +M +    P    YG +++G
Sbjct: 528  EEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 587

Query: 318  LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            L + G +  A K L  ++      DT   N LI   C  G LD+A SL  E+ +R  LP+
Sbjct: 588  LCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPD 647

Query: 378  THTFTILICGMCRNG-------MVDDAQKLFN---------------------------- 402
            + T+T LI G+CR G          +A+   N                            
Sbjct: 648  SFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFR 707

Query: 403  -KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQG-GNR 457
             +M+K G    V   NA+IDG  + G++EK + L ++M     G N T +  L  G   R
Sbjct: 708  QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKR 767

Query: 458  VH------------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             H                  DK +  +++   C + ++    KIL      G   D  T+
Sbjct: 768  KHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTF 827

Query: 500  NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            N LI+  C  G IN A  +   +   G+  D  T   +++ L R  R +++  +  +M +
Sbjct: 828  NMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSK 887

Query: 560  NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVEN 618
             G +P    Y  L+   CR      AF +  + +   I   +      +    + G+ + 
Sbjct: 888  QGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 619  A---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            A   ++ +L+M        +A +T  +   C++G V EAL +  V+  C   +   S   
Sbjct: 948  ASLLLRSMLKMKLVPT---IASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNV 1004

Query: 676  LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            LI GLC +G + +A ++F    ++GF+
Sbjct: 1005 LITGLCAKGDMAIAFELFEEMKRDGFL 1031



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 231/531 (43%), Gaps = 14/531 (2%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  N   F +LI    + G  + ++++   M   G  P+ +T   ++  + +       +
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
               +M      PD   +N L+N  C      ++  L++  EK G+ P + +Y+ ++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R+  A      M  + +  DV  Y ++I  L  + +      LL DMR+R I P+ 
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ GF + G +  AR L  E+      PN  TF  LI G    G   +A K+F+ 
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHM 358

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           ME  G   +   +  L+DGLCK  E + A   + +M+  +N     R++  G        
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK--RNGVCVGRITYTG-------- 408

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              M++  C  G + +A  +L ++++ G  PDI+TY++LINGFC+VG +  A ++   + 
Sbjct: 409 ---MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIY 465

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             GL P+ + Y TLI    R+   ++  RI+  M   G TP    +  L+T  C+  K +
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVA 525

Query: 584 LAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            A         D    +  S    I  +   GE   A     EM    +      Y   L
Sbjct: 526 EAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            GLC+ G +  A      L    A V    C  LI  +CK G LD A+ +F
Sbjct: 586 KGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLF 636



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 226/499 (45%), Gaps = 58/499 (11%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN--------IAFRKQLFLL- 151
            F  LI+GY   G+  KA   F +M +    P  + Y ++L         IA  K L  L 
Sbjct: 546  FDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605

Query: 152  --------------------------ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                                      A++++ EMV+ + LP+  T++ LI+GL + GKT 
Sbjct: 606  NVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665

Query: 186  VAIKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            +AI    E   RG ++PNK  YT  + G+ +  +    +    +M   G + D V  NA+
Sbjct: 666  IAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAM 725

Query: 245  LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            ++G+ ++ ++++   LL         P L +Y+ L+ G  + K    ++  YR M    I
Sbjct: 726  IDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI 785

Query: 305  EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             PD +    +I G+ E+  ++  +K+L     RG+  D + +N LI   C  G ++ A  
Sbjct: 786  LPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFD 845

Query: 365  LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
            +   +       + +T   ++  + RN    +++ + ++M K G  P    +  L++GLC
Sbjct: 846  MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905

Query: 425  KAGELEKANLLFYKM--------------------EIGK--NPTLFLRLSQGGNRVHDKA 462
            + G+++ A ++  +M                    + GK    +L LR       V   A
Sbjct: 906  RVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIA 965

Query: 463  SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            S  T++  +C  G + +A ++ + ++  G   D+++YN LI G C  G++  A +LF+E+
Sbjct: 966  SFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025

Query: 523  QLKGLRPDSVTYGTLINGL 541
            +  G   +  TY  L+ G+
Sbjct: 1026 KRDGFLANVTTYKALVGGI 1044



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 3/346 (0%)

Query: 82   YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
            + Q +D+L      V ++    +I GY ++G  EK  +   +M   +  P++  YN +L+
Sbjct: 706  FRQQMDKLGLTRDVVTTNA---MIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLH 762

Query: 142  IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
               +++    +  +Y  M+    LP+ +T   +I G+ +S   E+ +K+L     RG+  
Sbjct: 763  GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 202  NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
            ++ T+ ++IS  C     + A+ +   M   G S D    +A+++   +  R  E+  +L
Sbjct: 823  DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882

Query: 262  RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
                K G  P    Y  L++GL R      A+    +M   KI P  V    M+R L++ 
Sbjct: 883  HEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 322  GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            GK  +A  LL  M +  +VP    +  L+  FC  G + +A  L+V +       +  ++
Sbjct: 943  GKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002

Query: 382  TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
             +LI G+C  G +  A +LF +M++ G   +V  + AL+ G+   G
Sbjct: 1003 NVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQG 1048


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 228/459 (49%), Gaps = 28/459 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD Y YN VL      + +  A  +  EM++ +C PN VTF+  I    ++G  + A+++
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L++M + G  P+   Y+ +++G  +  R DEA +L   M    C P+ V YNA L G C 
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCI 121

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R +E   L+    +    P   ++S LI+ L + +  + A     +M +    PDVV 
Sbjct: 122 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVS 181

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I   S+  +  DA+KLL  M  +   PDT  +NA++K  C       A  L  ++ 
Sbjct: 182 YNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKML 238

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K+D   N  TF ILI  +C+NG V DA ++F  M K  C P +  +++LI+G  + G  E
Sbjct: 239 KKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDE 298

Query: 431 KANLLFYKME-----IGKNPTL-----FLRLSQGGNRVHD---------KASLQTMVEQY 471
            A  LF  M         N TL       R    G  + D         + +   ++   
Sbjct: 299 MAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSL 358

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  GL+++A  +  Q+ + G  PDI TYN+LING+ + G ++ ALK    +  +   PD+
Sbjct: 359 CQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDT 415

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           ++Y +++ GL R +R +DA ++  +M +  CTP+   +K
Sbjct: 416 ISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 454



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 198/390 (50%), Gaps = 21/390 (5%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVY 156
           ++  L++G+ + G  ++AL+    M    C+P+   YNA L    IA R +     +A  
Sbjct: 79  IYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIA-- 133

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EMV+ +C PN  TFS LIN L ++   E A+++L++M + G +P+  +Y  +IS     
Sbjct: 134 -EMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQ 192

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGS 275
            RAD+A +L   +K   C PD +++NA+L   CK +R  +A+ L+ +  +KD  +  + +
Sbjct: 193 ARADDALKL---LKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEM-T 248

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ LID L +  +  +A   +  M + +  PD+V Y  +I G SE G  + A  L   M 
Sbjct: 249 FNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP 308

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            R    D + YNA +KG C     D A  L  ++   D LPN  TF ILI  +C+ G+V+
Sbjct: 309 CRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVN 365

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG- 454
            A  ++ +M K G  P +  +NALI+G  + G L+ A      M    +   +  + +G 
Sbjct: 366 RAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGL 425

Query: 455 --GNRVHDKASLQT-MVEQYCTAGLIHKAY 481
               R  D   L T M+ + CT   +   Y
Sbjct: 426 CRAERWKDAEKLVTEMLRKNCTPNEVTFKY 455



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 166/355 (46%), Gaps = 53/355 (14%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PDTY YN ++KG C     +QA  L  E+ +    PN  TF   I   C+NG++D A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +L  +M K GC P V +++ L++G  + G +++A  L   M    N   +          
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCY---------- 112

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
              A+L+ +    C AG   +  +++ ++      P+  T+++LIN  C+   +  A+++
Sbjct: 113 --NAALKGL----CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEV 166

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +++Q  G  PD V+Y T+I+      R +DA ++   M    C P    + +++   C+
Sbjct: 167 LEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM---LCKPDTISFNAVLKCLCK 223

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            +++  A  L                               +  +L+ D ++N+     +
Sbjct: 224 AKRWYDAVEL-------------------------------VAKMLKKDCRINEMT---F 249

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            I +  LCQ+GQVK+A+ +F ++ + + +    +   LI+G  ++G  ++A D+F
Sbjct: 250 NILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF 304


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 229/444 (51%), Gaps = 13/444 (2%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL ++ +M +   LP+IV FS L+  ++K  K E  I +   +   GI  + ++++ +I 
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ +R   A     KM   G  P  V + +L+NGFC + R+ EA++L+      G+ P
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ +ID L   ++ D A      M +  I PDV+ Y  +I  L  +GK   + ++L
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM   GI PD   ++A+I  F   G L +A+    E+ +R   PN  T+  LI G+C +
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G++D+A+K+ N M   G FP+   +N L++G CK+  ++ A      M+I         +
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDA------MKI------LCVM 344

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S  G    D  +  T+ + YC AG  + A K+L ++   G LPDI T+N L++G C+ G 
Sbjct: 345 SHDGVD-GDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGK 403

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I  AL   ++LQ        +TY  +I G+ + ++ EDA+ +F  +   G +P    Y +
Sbjct: 404 IEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTT 463

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRD 595
           +M    R+R +  A  L+ +  +D
Sbjct: 464 MMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 218/445 (48%), Gaps = 15/445 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F  M E    P +  ++ +L    + + +   ++++  +  L    ++ +FS LI+
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              +  +  +A+  L +M + G  P+  T+  +++G C +NR  EA  L  ++   G  P
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YN +++  C+ R+VD AL +L   EK G  P + +Y+ LI  LF + ++  +    
Sbjct: 177 NVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARIL 236

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M    I PDV+ +  MI    + G++ +A K   +M +R + P+   YN+LI G C  
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           GLLD+A+ +   +  +   PN  T+  L+ G C++  VDDA K+   M   G       +
Sbjct: 297 GLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTY 356

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N L  G C+AG+   A  +  +M   G  P ++              +   +++  C  G
Sbjct: 357 NTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIY--------------TFNMLLDGLCEHG 402

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I KA   L  L +S  +  IITYN +I G CK   +  A  LF  L LKG+ PD +TY 
Sbjct: 403 KIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYT 462

Query: 536 TLINGLQRVDREEDAFRIFGQMPQN 560
           T++ GL+R     +A  ++ +M ++
Sbjct: 463 TMMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 178/340 (52%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++G+  V   ++A+    ++     +P+V IYN +++     +    AL V   M 
Sbjct: 146 FGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHME 205

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K+   P+++T++ LI  L  SGK  V+ ++L +M + GI P+  T++ +I    +  +  
Sbjct: 206 KMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLL 265

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA + + +M      P+ V YN+L+NG C    +DEA  +L      GF P   +Y+ L+
Sbjct: 266 EAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLV 325

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  ++KR D+A      M  + ++ D   Y  + +G  +AG+   A K+L+ M   G++
Sbjct: 326 NGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL 385

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD Y +N L+ G C+ G +++A     ++ K +++    T+ I+I GMC+   V+DA  L
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F  +   G  P V  +  ++ GL +     +A+ L+ KM+
Sbjct: 446 FCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMK 485



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 156/292 (53%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL+    M++   +PDV  YN+++   F    + ++  +  +M+++   P+++TFS +
Sbjct: 195 DTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAM 254

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+   K G+   A K  DEM QR + PN  TY  +I+GLC     DEA ++   M   G 
Sbjct: 255 IDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGF 314

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+ V YN L+NG+CK +RVD+A+ +L     DG      +Y+ L  G  +A +++ A  
Sbjct: 315 FPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEK 374

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M    + PD+  + +++ GL E GK++ A+  L D+++   V     YN +IKG C
Sbjct: 375 VLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMC 434

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
               ++ A  L   +  +   P+  T+T ++ G+ R  +  +A +L+ KM+K
Sbjct: 435 KANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 135/272 (49%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+  +  G    +      M      PDV  ++A++++  ++   L A   Y EM++ +
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PNIVT++ LINGL   G  + A K+L+ M  +G  PN  TY  +++G C+  R D+A 
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAM 338

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++   M   G   D   YN L  G+C+  + + A  +L      G +P + +++ L+DGL
Sbjct: 339 KILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGL 398

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               + ++A      + + +    ++ Y ++I+G+ +A KV+DA  L   +  +G+ PD 
Sbjct: 399 CEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDV 458

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             Y  ++ G     L  +A  L  ++ K D L
Sbjct: 459 ITYTTMMIGLRRKRLWLEAHELYRKMKKDDGL 490



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 198/459 (43%), Gaps = 51/459 (11%)

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           ++++A   +  M E +  P +V +  ++  +++  K +  + L   +   GI  D Y ++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI  FC    L  A S   ++ K    P+  TF  L+ G C    + +A  L +++   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 408 GCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
           G  P+V ++N +ID LC+  +++ A ++L +  ++G  P              D  +  +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRP--------------DVITYNS 218

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++ +   +G    + +IL  +   G  PD+IT++++I+ F K G +  A K + E+  + 
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRS 278

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           + P+ VTY +LINGL      ++A ++   M   G  P+   Y +L+   C+ ++     
Sbjct: 279 VDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKR----- 333

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                                        V++A++ L  M     D     Y     G C
Sbjct: 334 -----------------------------VDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           Q GQ   A  + + +V C  +    +   L+ GLC+ G ++ A+       K+  ++   
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             N +++ +   K NK   A++L C +   G   D   Y
Sbjct: 425 TYNIIIKGM--CKANKVEDAWYLFCSLALKGVSPDVITY 461


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 235/501 (46%), Gaps = 37/501 (7%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           SG  +VV+  +  LI+GY + G    AL     M      PD Y YN VL      + + 
Sbjct: 173 SGAANVVT--YTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWE 227

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  +  EM++ NC PN VTF+  I    ++G  + A+++L+ M + G  P+   Y+ ++
Sbjct: 228 KAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLV 287

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           +G  +  R D+A  L   M    C P+ V YNA L G C   R  +   L+    +    
Sbjct: 288 NGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCP 344

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   ++S L   L +    D A     +M +    PDVV+Y  +I   SE G+V DA+ L
Sbjct: 345 PNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALML 404

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M      PDT  +NA +K  C          L  ++ + D      TF ILI  +C+
Sbjct: 405 LDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQ 461

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF-- 448
           +G+V+ A ++F +M K  C P +  +++LI+G  + G +E A  LF  M     P +F  
Sbjct: 462 HGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPC--KPDIFSY 519

Query: 449 ----------LRLSQGGNRVHDKA---------SLQTMVEQYCTAGLIHKAYKILMQLAE 489
                      R    G  + + A         +   ++   C  G   +A ++  Q+ E
Sbjct: 520 NAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPE 579

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G+ PDI TYN+LINGF + G ++ AL L   +  K   PD+++Y + + GL R +R ++
Sbjct: 580 YGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNSTLKGLCRAERWKE 636

Query: 550 AFRIFGQMPQNGCTPSPAVYK 570
           A  I  +M +  C P+   +K
Sbjct: 637 AEEIVAEMLRKKCPPNEVTFK 657



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 257/558 (46%), Gaps = 52/558 (9%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L Q+   D A RL   M  S   P  +A N L+   C  RR+ +A  +L + ++ G    
Sbjct: 86  LVQLEDLDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESGSADA 144

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGKVKDAMKL 330
           + S++ L+ G  R  R  +A    R +   K+    +VV Y  +I G   +G++ DA+ L
Sbjct: 145 V-SHNTLVAGYCRDGRLADAE---RVLEAAKVSGAANVVTYTALINGYCRSGRLADALNL 200

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           ++ M    + PDTY YN ++KG C     ++A  L  E+ + +  PN  TF   I   C+
Sbjct: 201 IASM---PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQ 257

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           NG++D A +L  +M + GC P V +++ L++G  + G ++ A +L   M    N   +  
Sbjct: 258 NGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNA 317

Query: 451 LSQG---GNRVHD----------------KASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +G     R  D                +A+   +    C  GL+  A +++ Q+ + G
Sbjct: 318 ALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYG 377

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD++ YN+LIN F + G ++ AL L   +      PD++++   +  L R +R  D  
Sbjct: 378 CRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYDVE 434

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
            +  QM +  C      +  L+   C+    + A  ++ Q  +     D  +  S I  F
Sbjct: 435 ELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGF 494

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIV 668
            ++G VE+AI+    M  K + F    Y   L GLC+  + ++A  + + +   +C    
Sbjct: 495 SEQGLVESAIELFQSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIANMARKDC---- 547

Query: 669 TPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            PP+ +    LI+ LC++G+ D A++VF    + G    P +  Y      FS+  +   
Sbjct: 548 -PPNEITFNILINSLCQKGFADRAIEVFKQMPEYGST--PDIFTYNALINGFSEQGRLDD 604

Query: 726 AYHLL----CRMKSVGYD 739
           A +LL    C+  ++ Y+
Sbjct: 605 ALNLLSTMSCKPDAISYN 622



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 126/233 (54%), Gaps = 10/233 (4%)

Query: 83  WQTLDELRSG----NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           W  ++EL +     +  ++   F +LI    + G    A+E F +M ++ C PD+  Y++
Sbjct: 430 WYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSS 489

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N    + L   A+ ++  M    C P+I +++ ++ GL ++ + E A +++  M ++ 
Sbjct: 490 LINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIANMARKD 546

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN+ T+ I+I+ LCQ   AD A  +F +M + G +PD   YNAL+NGF +  R+D+AL
Sbjct: 547 CPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDAL 606

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            LL +       P   SY+  + GL RA+R+ EA     +M  +K  P+ V +
Sbjct: 607 NLLSTM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 173/626 (27%), Positives = 284/626 (45%), Gaps = 56/626 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ------LFLLAL 153
           +F  L+  Y    D   A +   +M    C P   +YN  +     ++      L  LA 
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 173

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +Y EM+  NC+ N V  +     L   GK + A +++ EM ++G +P+  TY+ VI+ L
Sbjct: 174 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 233

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C   + ++A+ LF +MK  G +PD   Y  L++ FCK   +++A  L       G  P +
Sbjct: 234 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 293

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +AK+  +A   + +M +    P+ V YG ++ GL +AG +  A ++ + 
Sbjct: 294 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 353

Query: 334 M----------------RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           +                    + P+   Y AL+ G C    +D A  L   +      PN
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 413

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  LI G C+ G +D AQ++F +M K G  PSV  + +LID + K G L+ A  +  
Sbjct: 414 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 473

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +M         L+ S   N V    +   M++  C  G   KA K+L  + E G  P+++
Sbjct: 474 QM---------LKDSCTPNVV----TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY +LI+G  K G I+ +L LF ++  KG  P+ VTY  LIN L      + A  + G+M
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-----IEEFLQ 612
            Q   T  P   K L  + C  + FS +F   L  L ++       +       I+ F +
Sbjct: 581 KQ---TYWP---KYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSK 634

Query: 613 KGEVENAIQ---GLLEMDFKL---NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
            G +E A++    ++E+   +   ND     Y   +  LC   QV+EA  ++S +     
Sbjct: 635 AGRLEIAMELHKEMMEVPSSVKTDNDM----YASLIQALCLASQVEEAFRLYSEMTRRGF 690

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDV 692
           +      V LI GL +    D A+ +
Sbjct: 691 VPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 238/508 (46%), Gaps = 33/508 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI+ L      +  +    E++   V+     + +LI  + K G  E+A   F +
Sbjct: 224 STYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE 283

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C P V  Y A+++   + +    A  +++ MV   C PN VT+  L++GL K+G 
Sbjct: 284 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 343

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
              A ++  ++                 +  + PN  TY  ++ GLC+ ++ D A+ L  
Sbjct: 344 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  SGC P+ + Y+AL++GFCK  ++D A  +     K G++P + +Y+ LID +F+  
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     +M ++   P+VV Y  MI GL   G+ + A+KLLS M E+G  P+   Y 
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ALI G    G +D +  L  ++ ++   PN  T+ +LI  +C  G++D A+ L  +M++ 
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
                +  +   I G  K+          +   +G      L   +    V        +
Sbjct: 584 YWPKYLQGYRCAIQGFSKS----------FIASLG-----ILEEMESYGTVPIAPVYGML 628

Query: 468 VEQYCTAGLIHKAYKILMQLAE--SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++ +  AG +  A ++  ++ E  S    D   Y SLI   C    +  A +L+ E+  +
Sbjct: 629 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRI 553
           G  P+   +  LI GL  V + ++A ++
Sbjct: 689 GFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 253/551 (45%), Gaps = 51/551 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++  + M   +C+PN+VT+  L++G  K  +     ++++ M   G  PN   +  ++ 
Sbjct: 61  AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 120

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C       AY+L  +M   GC P +V YN  +   C   ++     LL   EK     
Sbjct: 121 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP-DLLDLAEK--IYG 177

Query: 272 RLGSYSCLIDGLFRAK---------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
            + + +C+++ +  A          ++D+A+   ++M  +   PD   Y  +I  L  A 
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           KV+ A  L  +M+  G+ PD Y Y  LI  FC  GL++QA+ L  E+      P   T+T
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI    +   V  A  +F++M  AGC P+   + AL+DGLCKAG + KA  ++ K+ IG
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL-IG 356

Query: 443 KNPT----LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + +     +           +  +   +V+  C A  +  A+++L  +  SG  P+ I 
Sbjct: 357 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 416

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y++LI+GFCK G I+ A ++F ++   G  P   TY +LI+ + +  R + A ++  QM 
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           ++ CTP+   Y +++   CR                                   GE E 
Sbjct: 477 KDSCTPNVVTYTAMIDGLCR----------------------------------IGESEK 502

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A++ L  M+ K     +  YT  + GL + G++  +L++F+ +          +   LI+
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 679 GLCKRGYLDLA 689
            LC  G LD A
Sbjct: 563 HLCAAGLLDKA 573



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 165/686 (24%), Positives = 293/686 (42%), Gaps = 101/686 (14%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +ISG  +    ++A+    +M+   C P+V  Y  +L+   +K+       +   M+   
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG----------- 212
           C PN   F+ L++          A K+L+ MT  G  P    Y I I             
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 213 ------------------------------LCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                                         LC + + D+A++L  +M   G  PD   Y+
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++   C   +V++A  L +  +  G  P + +Y+ LID   +A   ++A   + +M   
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P VV Y  +I    +A +V  A  +   M + G  P+   Y AL+ G C  G + +A
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 363 RSLQVE-IWKRDS---------------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             +  + I   DS                PN  T+  L+ G+C+   VD A +L + M  
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +GC P+  +++ALIDG CKAG+++ A  +F +M + G  P+           VH   SL 
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-----------VHTYTSL- 455

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
             +++    G +  A K+L Q+ +    P+++TY ++I+G C++G    ALKL   ++ K
Sbjct: 456 --IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 513

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC-------- 577
           G  P+ VTY  LI+GL +  + + +  +F QM + GC+P+   Y+ L+   C        
Sbjct: 514 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 573

Query: 578 RRRKFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
           R     +  + W +YL+     I G     + S+              G+LE        
Sbjct: 574 RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--------------GILEEMESYGTV 619

Query: 634 QLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS--CVKLIHGLCKRGYLDLAM 690
            +AP Y + +    + G+++ A+ +   ++E  + V   +     LI  LC    ++ A 
Sbjct: 620 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 679

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLL 716
            ++    + GF+    V   L++ L+
Sbjct: 680 RLYSEMTRRGFVPELSVFVCLIKGLV 705



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 193/490 (39%), Gaps = 50/490 (10%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + GF     +  C    L +  R+ +A     +   E  + D VL   MI GL EA    
Sbjct: 3   ESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFD 59

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +AM  L  MR    +P+   Y  L+ GF     L   + +   +      PN   F  L+
Sbjct: 60  EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 119

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA----------------GEL 429
              C       A KL N+M   GC P   ++N  I  +C                  GE+
Sbjct: 120 HSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEM 179

Query: 430 EKANLLFYKME----------IGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLI 477
             AN +  K+           +GK    F  + +   +  V D ++   ++   C A  +
Sbjct: 180 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            KA+ +  ++   G  PD+ TY  LI+ FCK G I  A  LF+E++  G  P  VTY  L
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTAL 299

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+   +  +   A  IF +M   GC P+   Y +L+   C+    S AF ++ + +    
Sbjct: 300 IHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSD 359

Query: 598 GRDDESMKSIEE-----------------FLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
             D +     E+                   +  +V++A + L  M     +     Y  
Sbjct: 360 SADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDA 419

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C+ G++  A  +F  + +C  + +  +   LI  + K G LDLAM V    LK+ 
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 479

Query: 701 FILRPRVCNY 710
               P V  Y
Sbjct: 480 --CTPNVVTY 487



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 138/344 (40%), Gaps = 74/344 (21%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L K +  D   + LD + S        V+  LI G+ K G  + A E F +M + 
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 443

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P V+ Y ++++  F+     LA+ V  +M+K +C PN+VT++ +I+GL + G++E A
Sbjct: 444 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 503

Query: 188 IKMLDEMTQRGILPNKFTYTIVISG----------------------------------- 212
           +K+L  M ++G  PN  TYT +I G                                   
Sbjct: 504 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 563

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC     D+A  L  +MK +        Y   + GF K      +L +L   E  G VP 
Sbjct: 564 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 621

Query: 273 LGSYSCLIDGLFRAKR-------------------------------------YDEAYAW 295
              Y  LID   +A R                                      +EA+  
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           Y +M      P++ ++  +I+GL E  K  +A++L   +   G+
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 35/277 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F+   K   L S  + +++I  + K    DL  + L ++   + +     +  +I G  +
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 496

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           +G+ EKAL+    M+E  C P+V  Y A+++   +     L+L ++ +M +  C PN VT
Sbjct: 497 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 556

Query: 171 FSLLINGLSKSGKTEVA---------------------------------IKMLDEMTQR 197
           + +LIN L  +G  + A                                 + +L+EM   
Sbjct: 557 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 616

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--SGCSPDFVAYNALLNGFCKLRRVD 255
           G +P    Y ++I    +  R + A  L  +M +  S    D   Y +L+   C   +V+
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 676

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           EA  L     + GFVP L  + CLI GL   K++DEA
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 234/460 (50%), Gaps = 20/460 (4%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  +RS  V      +  LI G     + +KA+E  G+M E   +P+V +Y+++L    +
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     V+ EM +    P++V ++ LI+ L K GK + A  ++D M +RG+ PN  T
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF- 264
           Y ++I+ +C+     EA  +  KM + G +PD V YN L+ G   +  +DEA+ LL    
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 265 -EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K+   P + +++ +I GL    R  +A+     M E     ++V Y ++I GL    K
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V+ AM+L+ +M   G+ PD++ Y+ LIKGFC +  +D+A  L   +  R   P    +  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFP-SVGMFNALIDGLCKAGELEKA-NLLFYKMEI 441
           L+  MC  GM++ A+ LFN+M+    FP  V  ++ +I G CKAG+L+ A  LL   ++ 
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P              D  +   ++  +  +G +  A  +L Q+  SG LPD+  ++S
Sbjct: 496 GLTP--------------DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           LI G+   G IN  L+L +E+  K +  DS    TL   L
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSL 581



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 235/449 (52%), Gaps = 20/449 (4%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P+   Y  ++      +L   A+ +   M       ++VT+  LI GL  + + + A+
Sbjct: 111 CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV 170

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +++ EM + GI PN   Y+ ++ G C+  R ++  ++F++M + G  PD V Y  L++  
Sbjct: 171 ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK+ +  +A  ++    + G  P + +Y+ LI+ + +     EA    +KM E+ + PDV
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIV-PDTYCYNALIKGFCDLGLLDQARSLQ 366
           V Y  +I+GLS+  ++ +AM LL +M R + IV P+   +N++I+G CD+G + QA  ++
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + +   + N  T+ +LI G+ R   V  A +L ++M   G  P    ++ LI G CK 
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            ++++A  L   M + G  P LF          H    L  M EQ    G++ +A  +  
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELF----------HYIPLLVAMCEQ----GMMERARNLFN 456

Query: 486 QLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           ++    N P D++ Y+++I+G CK G++  A +L K +  +GL PD+VTY  +IN   + 
Sbjct: 457 EM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
              E A  +  QM  +G  P  AV+ SL+
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLI 543



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 65/512 (12%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMK---DSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  +Y  V++ LC+    D A  L   M       C P+ V+Y  L+   C  R  D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LLRS    G    + +Y  LI GL  A   D+A     +M E  IEP+VV+Y  +++G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            ++G+ +D  K+  +M E+GI PD   Y  LI   C +G   +A  +   + +R   PN 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+ +LI  MC+ G V +A  +  KM + G  P V  +N LI GL    E+++A  L  +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 439 MEIGKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M  GKN   P +               +  ++++  C  G + +A+++   + E+G + +
Sbjct: 316 MVRGKNIVKPNVV--------------TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING---LQRVDREEDAFR 552
           ++TYN LI G  +V  +  A++L  E+   GL PDS TY  LI G   + +VDR ED   
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED--- 418

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +   M   G  P    Y  L+   C                                  +
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMC----------------------------------E 444

Query: 613 KGEVENAIQGLLEMDFKLNDFQL--APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           +G +E A     EMD   N+F L    Y+  + G C+ G +K A  +   +V+       
Sbjct: 445 QGMMERARNLFNEMD---NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDA 501

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            +   +I+   K G ++ A  V      +GF+
Sbjct: 502 VTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 3/197 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  LL+ +      + +DE+ S  +   S  + +LI G+ K+   ++A +    M++  
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVA 187
            +P+++ Y  +L     + +   A  ++ EM   N  P ++V +S +I+G  K+G  + A
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMD--NNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            ++L  +   G+ P+  TY+IVI+   +    + A  +  +M  SG  PD   +++L+ G
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG 545

Query: 248 FCKLRRVDEALALLRSF 264
           +     +++ L L+R  
Sbjct: 546 YSTKGEINKVLELIREM 562


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 183/705 (25%), Positives = 300/705 (42%), Gaps = 107/705 (15%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ GY + G+  KA   F  M    CQ + Y Y  ++      +    AL ++  M + 
Sbjct: 223 ALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRD 282

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C PN+  F+ LI+GL KSG+   A  + D M Q G++P+  TY  +I G  ++ R ++A
Sbjct: 283 GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDA 342

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++   M+ +GC PD   YN L+ G C  ++ +EA  LL +  K+GF P + +++ LI+G
Sbjct: 343 LKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLING 401

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              A+++D+A     KM   K + D+ ++G +I  L +  ++K+A +LL+++   G+VP+
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 343 TYCYNALIKGFCDLGLLDQARSL---------QVEIWKRDSL------------------ 375
              Y ++I G+C  G +D A  +         Q   W  +SL                  
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 376 --------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                   PN  T+T L+ G C     D+A +LF  ME+ G  P    +  L D LCKAG
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 428 ELEKANLLFYKMEIGKNPTLFLRL----SQGGNRVHDKASLQTMVEQYCT------AGLI 477
             E+A     +  +      +  L    S+ GN       ++ M+++ CT      + L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 478 HK---------------------------AYKILM-----------------QLAESGNL 493
           H                            AY IL+                 ++  SG+ 
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P   TY   IN +CK G +  A  L  +++ +G+ PD VTY  LI+G   +   + AF  
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 554 FGQMPQNGCTPSPAVY----KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--- 606
             +M    C P+   Y    K L+  +    +      +W     DI+ +  E M     
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 607 ----------IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
                     I  F + G +E A   L  M  K        YT+ +   C     ++AL+
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 881

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
             S++ EC       S   L+ GLC  G  +    +F   L+ G+
Sbjct: 882 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGY 926



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 187/708 (26%), Positives = 305/708 (43%), Gaps = 41/708 (5%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL--DELRSGNVSVVSDVF 101
           P     FF W A+R   R  A + A +  LL        ++ L    L   + +    V 
Sbjct: 70  PATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVS 129

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
              I    + G    AL            P  Y  N  L    R  +      VY ++V+
Sbjct: 130 ADAIQAIRRTGSARLAL-----------SPKCY--NFALRSLARFDMTEYMGRVYSQLVQ 176

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              LP+ VT++ +I    K G    A +    + + G+ P  FT   ++ G C+     +
Sbjct: 177 DGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRK 236

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  LFL M   GC  +  +Y  L+ G C  + V +AL L    ++DG  P + +++ LI 
Sbjct: 237 ACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 296

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL ++ R  +A   +  M +  + P V+ Y  MI G S+ G++ DA+K+   M + G  P
Sbjct: 297 GLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHP 356

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D + YN LI G CD    ++A  L     K    P   TFT LI G C     DDA ++ 
Sbjct: 357 DDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMK 415

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           NKM  + C   + +F  LI+ L K   L++A  L    EI  N             V + 
Sbjct: 416 NKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLN--EISAN-----------GLVPNV 462

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++ YC +G +  A ++L  +   G  P+  TYNSL+ G  K   ++ A+ L  +
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +Q  G+ P+ +TY TL+ G       ++AFR+F  M QNG  P    Y  L    C+  +
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP---- 637
              A+S  ++  + ++         I+ F + G  + A   L+E   ++ D    P    
Sbjct: 583 AEEAYSFIVR--KGVALTKVYYTTLIDGFSKAGNTDFAAT-LIE---RMIDEGCTPDSYT 636

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y++ L  LC+  ++ EAL I   +       T  +   LI  + + G  D A  ++    
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +G   +P    Y +    + K+ +   A  L+ +M+  G   D   Y
Sbjct: 697 SSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 244/549 (44%), Gaps = 61/549 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I+ L+K +      + L+E+ +  +      +  +I GY K G  + ALE    M+   
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           CQP+ + YN+++    + +    A+A+  +M K   +PN++T++ L+ G       + A 
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK-------------------- 228
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   ++                    
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 229 ------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                       M D GC+PD   Y+ LL+  CK +R++EAL +L      G    + +Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID + R  ++D A   Y +M     +P    Y V I    + G+++DA  L+  M  
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------ 390
            G+ PD   YN LI G   +G +D+A S    +      PN  T+ +L+  + +      
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 391 -----NGM-----VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                +GM     +D   +L  +M K G  P+V  +++LI G CKAG LE+A LL   M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM- 851

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                       +G +   D  +L  +++  C      KA   +  ++E G  P + +Y 
Sbjct: 852 ----------CGKGLSPNEDIYTL--LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYR 899

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            L+ G C  G+      LF +L   G   D V +  L +GL +    +  F++   M + 
Sbjct: 900 LLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959

Query: 561 GCTPSPAVY 569
            C  S   Y
Sbjct: 960 YCCISSQTY 968



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 137/338 (40%), Gaps = 16/338 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  L K    +     LD++    +      + +LI    + G  + A   + +M  
Sbjct: 638 SVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTS 697

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P    Y   +N   ++     A  +  +M +    P++VT+++LI+G    G  + 
Sbjct: 698 SGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDR 757

Query: 187 AIKMLDEMTQRGILPNKFTYTIVI----------------SGLCQINRADEAYRLFLKMK 230
           A   L  M      PN +TY +++                SG+  +   D  ++L  +M 
Sbjct: 758 AFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G +P    Y++L+ GFCK  R++EA  LL      G  P    Y+ LI      K ++
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A ++   M E   +P +  Y +++ GL   G  +    L  D+ E G   D   +  L 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            G    G +D    +   + KR    ++ T+ ++   M
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score = 45.8 bits (107), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 3/180 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D+ WQ L+ +    ++     +  LI+G+ K G  E+A      M      P+  IY  
Sbjct: 806 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++      + F  AL+    M +    P + ++ LL+ GL   G  E    +  ++ + G
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELG 925

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
              ++  + I+  GL +    D  +++   M+   C      Y  + N   K+  V  +L
Sbjct: 926 YNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN---KMHEVSSSL 982


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 260/604 (43%), Gaps = 92/604 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D  W+  + +++  V         LI  Y K+   E+A   +  M      PDV   +A+
Sbjct: 241 DAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSAL 300

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG- 198
           ++   R   F  A A++ EM K+   PN VT+   I+ L+K  +   ++ +L EM  RG 
Sbjct: 301 VDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGV 360

Query: 199 ----------------------------------ILPNKFTYTIVISGLCQINRADEAYR 224
                                             I PN  TYT+++   C+    D A +
Sbjct: 361 AMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQ 420

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++   SP+ V ++++LNG  K   + +A   +R  +  G  P + +Y  LIDG F
Sbjct: 421 MLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFF 480

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV---- 340
           + +  + A   YR M  E +E +  +   ++ GL + G +++A  L  DM ERG++    
Sbjct: 481 KCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHV 540

Query: 341 -------------------------------PDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                          PD   YN  I   C LG   +A+S   E+
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM 600

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL N+M+ +   P++  +  L+ GL +AG +
Sbjct: 601 RNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVV 660

Query: 430 EKANLLFYKM-EIGKNPT--LFLRLSQG--GNR-------VH----------DKASLQTM 467
           EKA  L  +M   G  PT   + R+ Q   G+R       VH          D     T+
Sbjct: 661 EKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTL 720

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           V   C  G+  KA  +L ++   G  PD IT+N+LI G CK  +++ A   + ++  +GL
Sbjct: 721 VHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGL 780

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+   R  +A  +  +M + G  P+   Y  L+T   ++     A  
Sbjct: 781 SPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALR 840

Query: 588 LWLQ 591
           L+ +
Sbjct: 841 LYCE 844



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 167/650 (25%), Positives = 285/650 (43%), Gaps = 24/650 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G++  GD + A E   +MK    +P V  +  ++    + +    A  +Y  MV
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMV 286

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   LP++VT S L++GL + G+   A  +  EM + G+ PN  TY   I  L ++ R +
Sbjct: 287 RSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVN 346

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E+  L  +M   G + D V Y  +++   K  +++EA  +LR    D   P   +Y+ L+
Sbjct: 347 ESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLV 406

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   RA   D A     +M E+ + P+VV +  ++ GL + G +  A   +  M++ GI 
Sbjct: 407 DAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIA 466

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI GF      + A  +  ++       N      L+ G+ +NG +++A+ L
Sbjct: 467 PNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEAL 526

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M + G       +  L+DGL K G +  A      +++G+   L  R     N   D
Sbjct: 527 FKDMGERGLLLDHVNYATLMDGLFKTGNMPAA------LKVGQE--LMER-----NLSPD 573

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                  +   C  G   +A   L ++  +G  PD  TYN++I+  C+ GN + ALKL  
Sbjct: 574 AVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLN 633

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++   ++P+ +TY TL+ GL      E A  +  +M   G TP+P  Y+ ++      R
Sbjct: 634 EMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR 693

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYT 639
              +   +    +      D     ++   L   G    A   L EM  +     +AP T
Sbjct: 694 SPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGR----GIAPDT 749

Query: 640 I----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
           I     ++G C+   +  A   ++ ++         +   L+ GL   G +  A  V   
Sbjct: 750 ITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICE 809

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             K G  L P    Y +    ++K + KV A  L C M S G+   A  Y
Sbjct: 810 MKKMG--LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 857



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 166/647 (25%), Positives = 282/647 (43%), Gaps = 53/647 (8%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           +NA+++   + Q    ALAV   M       ++V ++ L+ G   SG  + A ++ + M 
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G+ P+  T+T +I   C++ R +EA+ L+  M  SG  PD V  +AL++G C+  R  
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA AL R  +K G  P   +Y   ID L + +R +E+     +M    +  D+V+Y  ++
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             L + GK+++A  +L       I P+   Y  L+   C  G +D A  + +++ ++   
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN  TF+ ++ G+ + G +  A     KM+ +G  P+V  +  LIDG  K  + ++A L 
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC-QGQEAALD 490

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            Y+        +     +  N + D     ++V      G I +A  +   + E G L D
Sbjct: 491 VYR-------DMLHEGVEANNFIVD-----SLVNGLRKNGNIEEAEALFKDMGERGLLLD 538

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            + Y +L++G  K GN+  ALK+ +EL  + L PD+V Y   IN L R+ +  +A     
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD--ESMKSIEEFLQK 613
           +M   G  P  A Y ++++  CR    S A  L L  ++  S + +       +   L+ 
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKL-LNEMKWSSIKPNLITYTTLVVGLLEA 657

Query: 614 GEVENAIQGLLEMD--------------FKLNDFQLAPYTIWLIG-LCQDGQVKEALNIF 658
           G VE A   L EM                +      +PY I  +  L     +   + ++
Sbjct: 658 GVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVY 717

Query: 659 SVLVE---CKAIVTPPSCV-----------------KLIHGLCKRGYLDLAMDVFLYTLK 698
           + LV    C  +    + V                  LI G CK  +LD A   +   L 
Sbjct: 718 NTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLH 777

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G        N LL  L      +   A  ++C MK +G + +   Y
Sbjct: 778 QGLSPNIATFNTLLGGL--ESAGRIGEADTVICEMKKMGLEPNNLTY 822



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 239/549 (43%), Gaps = 58/549 (10%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           +    D   Q L ++   +VS     F  +++G  K G   KA     KMK+    P+V 
Sbjct: 411 RAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV 470

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            Y  +++  F+ Q    AL VY +M+      N      L+NGL K+G  E A  +  +M
Sbjct: 471 TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDM 530

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            +RG+L +   Y  ++ GL +      A ++  ++ +   SPD V YN  +N  C+L + 
Sbjct: 531 GERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKF 590

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            EA + L+     G  P   +Y+ +I    R     +A     +M    I+P+++ Y  +
Sbjct: 591 SEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTL 650

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVP--------------------------------- 341
           + GL EAG V+ A  LL++M   G  P                                 
Sbjct: 651 VVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGL 710

Query: 342 --DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YN L+   C  G+  +A  +  E+  R   P+T TF  LI G C++  +D+A  
Sbjct: 711 HADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFA 770

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRV 458
            + +M   G  P++  FN L+ GL  AG + +A+ +  +M+ +G  P          N  
Sbjct: 771 TYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPN---------NLT 821

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           +D      +V  Y       +A ++  ++   G +P   TYNSLI+ F K G +N A +L
Sbjct: 822 YD-----ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKEL 876

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL------ 572
           F E++ +G+   S TY  L+NG  ++    +   +   M + G  PS     S+      
Sbjct: 877 FSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSK 936

Query: 573 --MTWSCRR 579
             MTW  RR
Sbjct: 937 PGMTWEARR 945



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 252/579 (43%), Gaps = 90/579 (15%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT--------------------- 205
           + V++++ + GLS+ G   +A  +L EM +RG+  +  T                     
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 206 ----------------YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF- 248
                           +  +I G C++     A  +  +M   G S D V YN L+ GF 
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFF 235

Query: 249 ----------------------------------CKLRRVDEALALLRSFEKDGFVPRLG 274
                                             CK++R++EA  L     + G +P + 
Sbjct: 236 YSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVV 295

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + S L+DGL R  R+ EAYA +R+M +  + P+ V Y   I  L++  +V +++ LL +M
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             RG+  D   Y  ++      G +++A+ +       +  PN  T+T+L+   CR G +
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQ 453
           D A+++  +ME+    P+V  F+++++GL K G + KA     KM + G  P +      
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV----- 470

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +  T+++ +        A  +   +   G   +    +SL+NG  K GNI 
Sbjct: 471 ---------TYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIE 521

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LFK++  +GL  D V Y TL++GL +      A ++  ++ +   +P   VY   +
Sbjct: 522 EAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFI 581

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLN 631
              CR  KFS A S +L+ +R+     D++  +  I    ++G    A++ L EM +   
Sbjct: 582 NCLCRLGKFSEAKS-FLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSI 640

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
              L  YT  ++GL + G V++A  + + +       TP
Sbjct: 641 KPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 205/453 (45%), Gaps = 23/453 (5%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  N +     F    +R  L    + + ++  L K        +   EL   N+S  + 
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV 575

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+ V I+   ++G   +A     +M+    +PD   YN +++   R+     AL +  EM
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              +  PN++T++ L+ GL ++G  E A  +L+EM   G  P   TY  V+   C  +R+
Sbjct: 636 KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGSRS 694

Query: 220 D----EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                E + L   M  +G   D   YN L++  C      +A  +L      G  P   +
Sbjct: 695 PYVILEVHEL---MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTIT 751

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ LI G  ++   D A+A Y +M  + + P++  +  ++ GL  AG++ +A  ++ +M+
Sbjct: 752 FNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMK 811

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G+ P+   Y+ L+ G+       +A  L  E+  +  +P   T+  LI    + GM++
Sbjct: 812 KMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMN 871

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
            A++LF++M++ G   +   ++ L++G  K     +  +L   M E+G  P+        
Sbjct: 872 QAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS-------- 923

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                 K ++ +M   +   G+  +A ++L  L
Sbjct: 924 ------KGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/531 (23%), Positives = 221/531 (41%), Gaps = 60/531 (11%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D +  N+++  +C L  +  AL+LLRS    G  P++ +                     
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLRS--SSGPQPQVAA--------------------- 115

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
                     D V Y + + GLSE G  + A  +LS+M +RG+  D    +  + G    
Sbjct: 116 ----------DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRT 165

Query: 357 GLLDQARSLQVEIWKRDSLPNTHT--FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           GL+ +A +L   + +   +       +  LI G C+   +  A  +  +M   G    V 
Sbjct: 166 GLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVV 225

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N L+ G   +G+ + A  +  +M+  G  P++                  T++ +YC 
Sbjct: 226 GYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTH--------------TTLIGEYCK 271

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
              I +A+ +   +  SG LPD++T ++L++G C+ G  + A  LF+E+   G+ P+ VT
Sbjct: 272 MKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVT 331

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T I+ L +V R  ++  + G+M   G      +Y ++M    +  K   A  +    L
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 594 RD-ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            D I+         ++   + G ++ A Q LL+M+ K     +  ++  L GL + G + 
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           +A      + +        +   LI G  K    + A+DV+   L  G        N+++
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGV----EANNFIV 507

Query: 713 RSLL--FSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
            SL+    K+     A  L   M   G  LD   Y    +L+ G + T  M
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY---ATLMDGLFKTGNM 555



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 152/343 (44%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+ + +IS   +        + L+E++  ++      +  L+ G  + G  EKA     +
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNE 669

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M      P    Y  VL      +   + L V+  M+      +I  ++ L++ L   G 
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGM 729

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           T  A  +LDEM  RGI P+  T+  +I G C+ +  D A+  + +M   G SP+   +N 
Sbjct: 730 TRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNT 789

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL G     R+ EA  ++   +K G  P   +Y  L+ G  +     EA   Y +M  + 
Sbjct: 790 LLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKG 849

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P    Y  +I   ++AG +  A +L S+M+ RG++  +  Y+ L+ G+  L    + R
Sbjct: 850 FIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVR 909

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            L  ++ +    P+  T + +     + GM  +A++L   + K
Sbjct: 910 ILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 228/462 (49%), Gaps = 15/462 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K G+ E+      +M++  C  DV  YNA++N   +      A + + EM +L 
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            + N+VT S  ++   K G    A+K+  +M  RG++PN+FTYT ++ G C+  R D+A 
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M   G  P+ V Y  +++G CK  +V  A  +L   E+ G       Y+ LI G 
Sbjct: 360 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F  K  + A     +M  + +E DV LYG +I GL +  K+ +A  LL  M + G+ P+T
Sbjct: 420 FMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNT 479

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  ++  F   G   +A +L  +I      PN  T+  LI G+C+ G + +A   F+K
Sbjct: 480 VIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDK 539

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M + G  P+V ++  LIDG CK G L KA  L  +M + K  +L            DK  
Sbjct: 540 MRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEM-VDKGMSL------------DKVV 586

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             ++++ +   G +  A+ +  ++ E+G   D+  Y   I+GFC +  +  A  +  E+ 
Sbjct: 587 YTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 646

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ--NGCT 563
             G+ PD   Y  LI   Q++   E+A  +  +M    + CT
Sbjct: 647 GTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSSCT 688



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 239/477 (50%), Gaps = 19/477 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK--QLFLLALAVYY 157
            F ++I    K G+  +A   F +MK   C PDV  YN++++  + K  +L  + L V  
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLID-GYGKCGELEEVELLVS- 258

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM K  C  ++VT++ LIN  SK G  E A     EM + G++ N  T +  +   C+  
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              EA +LF +M+  G  P+   Y +L++G CK  R+D+A+ LL      G VP + +Y+
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 378

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++DGL +  +   A      M    ++ + +LY  +I G       + A+ LL++M+ +
Sbjct: 379 VMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+  D   Y  LI G C +  LD+A+SL  ++      PNT  +T ++    + G   +A
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
             L +K+  +G  P+V  + ALIDGLCKAG + +A   F KM E+G +P + +       
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQV------- 551

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T+++ +C  G + KA  ++ ++ + G   D + Y SLI+G  K G++ GA 
Sbjct: 552 -------YTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF 604

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            L  ++   GL+ D   Y   I+G   ++  ++A  +  +M   G TP    Y  L+
Sbjct: 605 ALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 265/532 (49%), Gaps = 24/532 (4%)

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           +++ +L++     L   A+     + +L   PN  T + ++  L+++ +  +  ++ + +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
                 PN FT+ IVI  LC+     EA  LF++MK  GCSPD V YN+L++G+ K   +
Sbjct: 195 PA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           +E   L+    K G    + +Y+ LI+   +    ++AY+++ +M    +  +VV     
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +    + G V++AMKL + MR RG++P+ + Y +L+ G C  G LD A  L  E+  +  
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           +PN  T+T+++ G+C+ G V  A  + + ME+AG   +  ++  LI G       E+A  
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L  +M   KN  + L +S  G          T++   C    + +A  +L ++ + G  P
Sbjct: 431 LLNEM---KNKGMELDVSLYG----------TLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + + Y ++++ F K G  + A+ L  ++   GL+P+ VTY  LI+GL +     +A   F
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
            +M + G  P+  VY +L+   C+    S A  L  + +      D     S I+  +++
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQ 597

Query: 614 GEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           G+++ A      ++E   +L+   L  YT ++ G C    ++EA  + S ++
Sbjct: 598 GDLQGAFALKAKMIETGLQLD---LYCYTCFISGFCNMNMMQEARGVLSEMI 646



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 213/474 (44%), Gaps = 85/474 (17%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           + E+R    +     +  LI+ + K G  EKA   FG+MK      +V   +  ++   +
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + L   A+ ++ +M     +PN  T++ L++G  K+G+ + AI +LDEM  +G++PN  T
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376

Query: 206 YTIVISGLCQ----------------------------------INRADE-AYRLFLKMK 230
           YT+++ GLC+                                  +N+  E A  L  +MK
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMK 436

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           + G   D   Y  L+ G CK++++DEA +LL   +  G  P    Y+ ++D  F+A +  
Sbjct: 437 NKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKES 496

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA A   K+ +  ++P+VV Y  +I GL +AG + +A+     MRE G+ P+   Y  LI
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLI 556

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            GFC +G L +A  L                         N MVD    L +K+      
Sbjct: 557 DGFCKIGSLSKAVHLM------------------------NEMVDKGMSL-DKV------ 585

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
               ++ +LIDG  K G+L+ A  L  KM E G    L+                   + 
Sbjct: 586 ----VYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLY--------------CYTCFIS 627

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
            +C   ++ +A  +L ++  +G  PD   YN LI  + K+GN+  A  L  E++
Sbjct: 628 GFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 245/544 (45%), Gaps = 59/544 (10%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           + LP++  F  L++ L+  G  + A++ L  + Q  + PN  T   ++  L +  +    
Sbjct: 130 SALPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLV 187

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RLF  +     +P+   +N +++  CK   + EA AL    +  G  P + +Y+ LIDG
Sbjct: 188 RRLFEHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDG 243

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +    +E      +M +     DVV Y  +I   S+ G ++ A     +M+  G++ +
Sbjct: 244 YGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMAN 303

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               +  +  FC  GL+ +A  L  ++  R  +PN  T+T L+ G C+ G +DDA  L +
Sbjct: 304 VVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 363

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVH 459
           +M   G  P+V  +  ++DGLCK G++  A+ +   ME   +  N  L+  L  G     
Sbjct: 364 EMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHG--HFM 421

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +K S               +A  +L ++   G   D+  Y +LI G CKV  ++ A  L 
Sbjct: 422 NKNS--------------ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLL 467

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            ++   GLRP++V Y T+++   +  +E +A  +  ++P +G  P+   Y +L+   C+ 
Sbjct: 468 HKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCK- 526

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                A S++               ++I  F +  E+     GL        D  +  YT
Sbjct: 527 -----AGSIY---------------EAISHFDKMREL-----GL--------DPNVQVYT 553

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + G C+ G + +A+++ + +V+    +       LI G  K+G L  A  +    ++ 
Sbjct: 554 TLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIET 613

Query: 700 GFIL 703
           G  L
Sbjct: 614 GLQL 617



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 159/410 (38%), Gaps = 90/410 (21%)

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            R  +P  +  + L+    D GLLD A      + +    PNT T   ++  + RN    
Sbjct: 128 HRSALPSVF--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGG 185

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
             ++LF  +      P+V  FN +ID LCK GEL +A              LF+R+   G
Sbjct: 186 LVRRLFEHLPA----PNVFTFNIVIDFLCKQGELVEAR------------ALFVRMKAMG 229

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                           C+                    PD++TYNSLI+G+ K G +   
Sbjct: 230 ----------------CS--------------------PDVVTYNSLIDGYGKCGELEEV 253

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L  E++  G   D VTY  LIN   +    E A+  FG+M + G   +     + +  
Sbjct: 254 ELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDA 313

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+      A  L+ Q                            ++G++  +F       
Sbjct: 314 FCKEGLVREAMKLFAQM--------------------------RVRGMMPNEFT------ 341

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             YT  + G C+ G++ +A+ +   +V    +    +   ++ GLCK G + +A DV   
Sbjct: 342 --YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSL 399

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + G      +   L+     +K++++  A  LL  MK+ G +LD  LY
Sbjct: 400 MERAGVKANELLYTTLIHGHFMNKNSER--ALDLLNEMKNKGMELDVSLY 447


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 230/494 (46%), Gaps = 31/494 (6%)

Query: 112 GDCEK-ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            DC   AL  + +M      P  + +        R      ALA+   M +  C+P+ V 
Sbjct: 158 ADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVL 217

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           +  +I+ L   G    A  +LDEM   G   +  T+  V+ GLC +    EA RL  +M 
Sbjct: 218 YQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM 277

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY--SCLIDGLFRAKR 288
             GC+P  V Y  LL G C+ R+ DEA A+L      G VP +     + +I G     +
Sbjct: 278 MHGCTPSVVTYGFLLRGLCRTRQADEAYAML------GRVPEVNVVMLNTVIRGCLAEGK 331

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
              A   Y  M  +   PDV  Y +++ GL + G+   A+++L +M E+G  P+   Y+ 
Sbjct: 332 LARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYST 391

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+  FC  G+ D AR++  ++  +    N+  +  +I  + ++G +D+A +L  +M+  G
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQG 451

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM--------EIGKNPTLFLRLSQG----GN 456
           C P +  +N +I  LC   ++++A  +F  +         I  N  +   L  G    G 
Sbjct: 452 CKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGL 511

Query: 457 RVH----------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           R+           D  S   +++  C  G + ++  +L ++   G  P+  +YN LIN  
Sbjct: 512 RLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK G +  AL+L KE+  +GL PD VTY TLINGL +V     A  +  ++P     P  
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDI 631

Query: 567 AVYKSLMTWSCRRR 580
             Y  L++W C+ R
Sbjct: 632 VTYNILISWHCKVR 645



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 244/540 (45%), Gaps = 54/540 (10%)

Query: 62  SFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           SF S +AV+S L + +       LY + L +     V   +  F V      ++G    A
Sbjct: 144 SFRSYNAVLSTLARADCHADALLLYRRMLRD----RVPPTTFTFGVAARALCRLGRARDA 199

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L     M    C PD  +Y  V++    +     A  +  EM+ + C  ++ TF+ ++ G
Sbjct: 200 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLG 259

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY-------------- 223
           L   G    A +++D M   G  P+  TY  ++ GLC+  +ADEAY              
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVML 319

Query: 224 -----------------RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
                             L+  M   GC PD   YN L++G CKL R   A+ +L   E+
Sbjct: 320 NTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEE 379

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +YS L+    R   +D+A A   +M  +    +   Y  +I  L + GK+ +
Sbjct: 380 KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDE 439

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM+L+ +M+ +G  PD   YN +I   C+   +D+A  +   + +   + N  T+  LI 
Sbjct: 440 AMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIH 499

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP 445
            +  +G   +  +L N+M   GC   V  +N LI  LCK G ++++ +L  +M   G  P
Sbjct: 500 ALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKP 559

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             F              S   ++ + C AG +  A ++  ++   G  PDI+TYN+LING
Sbjct: 560 NNF--------------SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CKVG  + AL L ++L  + + PD VTY  LI+   +V   +DA  +  +    G  P+
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPN 665



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 233/528 (44%), Gaps = 51/528 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  +++ +++ L+++     A+ +   M +  + P  FT+ +    LC++ RA +A  L
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC PD V Y  +++       V EA  LL      G    + +++ ++ GL  
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG 262

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                EA     +M      P VV YG ++RGL    +  +A  +L  + E  +V     
Sbjct: 263 LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV----M 318

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
            N +I+G    G L +A  L   +  +   P+ HT+ IL+ G+C+ G    A ++ ++ME
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + GC P++  ++ L+   C+ G  + A  +  +M        F   SQG N +       
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG----FSMNSQGYNGI------- 427

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
             +      G + +A +++ ++   G  PDI TYN++I   C    ++ A  +F  L  +
Sbjct: 428 --IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE 485

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+  + +TY TLI+ L    R ++  R+  +M  +GC      Y  L+   C+       
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKE------ 539

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
                       G  D SM  +EE + KG              K N+F    Y + +  L
Sbjct: 540 ------------GNVDRSMMLLEEMMTKG-------------IKPNNFS---YNMLINEL 571

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           C+ G+V++AL +   ++         +   LI+GLCK G+   A+++ 
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLL 619



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 204/449 (45%), Gaps = 54/449 (12%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F  L+ G  +    ++A    G++ E +    V + N V+     +     A  
Sbjct: 284 SVVTYGF--LLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARATE 337

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +Y  M    C P++ T+++L++GL K G+   A++MLDEM ++G  PN  TY+ ++   C
Sbjct: 338 LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFC 397

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +    D+A  +  +M   G S +   YN ++    K  ++DEA+ L++  +  G  P + 
Sbjct: 398 RNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDIC 457

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ +I  L    + DEA   +  + EE +  + + Y  +I  L  +G+ ++ ++L ++M
Sbjct: 458 TYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEM 517

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G   D   YN LIK  C  G +D++  L  E+  +   PN  ++ +LI  +C+ G V
Sbjct: 518 VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKV 577

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
            DA +L  +M   G  P +  +N LI+GLCK G                           
Sbjct: 578 RDALELSKEMLNQGLTPDIVTYNTLINGLCKVG--------------------------- 610

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                                  H A  +L +L      PDI+TYN LI+  CKV  ++ 
Sbjct: 611 ---------------------WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 649

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           A  L  +    G+ P+  T+G ++    R
Sbjct: 650 ASMLLDKAVSGGIVPNERTWGMMVQNFVR 678



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 191/430 (44%), Gaps = 52/430 (12%)

Query: 256 EALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            AL LL    +     P   SY+ ++  L RA  + +A   YR+M  +++ P    +GV 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
            R L   G+ +DA+ LL  M   G VPD   Y  +I      G + +A +L  E+     
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
             + +TF  ++ G+C  G V +A +L ++M   GC PSV  +  L+ GLC+  + ++A  
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA-- 304

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             Y M +G+ P + + +            L T++      G + +A ++   +   G  P
Sbjct: 305 --YAM-LGRVPEVNVVM------------LNTVIRGCLAEGKLARATELYEMMGSKGCPP 349

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+ TYN L++G CK+G    A+++  E++ KG  P+ VTY TL++   R    +DA  + 
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            QM   G + +   Y  ++                  Y     G+ DE+M+ ++E   +G
Sbjct: 410 DQMSAKGFSMNSQGYNGII------------------YALGKDGKLDEAMRLVQEMKSQG 451

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
              +                +  Y   +  LC + Q+ EA +IF  L+E   +    +  
Sbjct: 452 CKPD----------------ICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495

Query: 675 KLIHGLCKRG 684
            LIH L   G
Sbjct: 496 TLIHALLHSG 505



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 148/332 (44%), Gaps = 35/332 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G  K+G C  A+    +M+E  C P++  Y+ +L+   R  ++  A A+  +M
Sbjct: 353 TYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N   ++ +I  L K GK + A++++ EM  +G  P+  TY  +I  LC  ++ 
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQM 472

Query: 220 DEAYRLF-------------------------------LKMKDS----GCSPDFVAYNAL 244
           DEA  +F                               L++ +     GC  D V+YN L
Sbjct: 473 DEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGL 532

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +   CK   VD ++ LL      G  P   SY+ LI+ L +A +  +A    ++M  + +
Sbjct: 533 IKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGL 592

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD+V Y  +I GL + G    A+ LL  +    + PD   YN LI   C + LLD A  
Sbjct: 593 TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASM 652

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           L  +      +PN  T+ +++    R  +  D
Sbjct: 653 LLDKAVSGGIVPNERTWGMMVQNFVRQPVNPD 684


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 256/529 (48%), Gaps = 17/529 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++VI   +K    D   +  DE+ S  +S+       LI+G+ K  D   AL  F KM++
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+   ++ ++    +      AL  Y +M  L   P++     +I G  K  K E 
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+K+ DE  + G L N F    ++S LC+  + DEA  L  KM+  G  P+ V+YN ++ 
Sbjct: 428 ALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+ + +D A  +  +  + G  P   +YS LIDG FR      A      M    IE 
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV 546

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           + V+Y  +I GL + G+   A +LL++M  E+ +      YN++I GF   G +D A + 
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+      PN  T+T L+ G+C+N  +D A ++ ++M+  G    +  + ALIDG CK
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666

Query: 426 AGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
              +E A+ LF + +E G NP+              +    +++  +   G +  A  + 
Sbjct: 667 RSNMESASALFSELLEEGLNPS--------------QPIYNSLISGFRNLGNMVAALDLY 712

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G   D+ TY +LI+G  K GN+  A +L+ E+Q  GL PD + Y  ++NGL + 
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
            +     ++F +M +N  TP+  +Y +++    R      AF L  + L
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 282/595 (47%), Gaps = 27/595 (4%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLL 174
           +ALE   +  E   +PD  +Y+  +    +     +A ++  EM  K  C+P+  T++ +
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I    K G  + AI++ DEM   GI  N    T +I+G C+ N    A  LF KM+  G 
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP+ V ++ L+  F K   +++AL   +  E  G  P +     +I G  + ++++EA  
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + + FE  +  +V +   ++  L + GK  +A +LLS M  RGI P+   YN ++ G C
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               +D AR +   I ++   PN +T++ILI G  RN    +A ++ N M  +    +  
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           ++  +I+GLCK G+  KA  L   M   K      RL           S  ++++ +   
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEK------RLCVSC------MSYNSIIDGFFKE 597

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A     ++  +G  P++ITY SL+NG CK   ++ AL++  E++ KG++ D   Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
           G LI+G  +    E A  +F ++ + G  PS  +Y SL++          A  L+ + L+
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717

Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDG 649
           D    D  +  + I+  L+ G +  A +   EM        L P    YT+ + GL + G
Sbjct: 718 DGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA----VGLVPDEIIYTVIVNGLSKKG 773

Query: 650 QVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           Q  + + +F  +   K  VTP   +   +I G  + G LD A  +    L  G +
Sbjct: 774 QFVKVVKMFEEMK--KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 216/447 (48%), Gaps = 51/447 (11%)

Query: 97  VSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           +++VF    ++S   K G  ++A E   KM+     P+V  YN V+    R++   LA  
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+  +++    PN  T+S+LI+G  ++   + A+++++ MT   I  N   Y  +I+GLC
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559

Query: 215 QINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           ++ +  +A  L   M ++       ++YN++++GF K   +D A+A       +G  P +
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L++GL +  R D+A     +M  + ++ D+  YG +I G  +   ++ A  L S+
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + E G+ P    YN+LI GF +LG +  A  L  ++ K     +  T+T LI G+ ++G 
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +  A +L+ +M+  G  P   ++  +++GL K G+  K   +F +M+  KN         
Sbjct: 740 LILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK--KNNV------- 790

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                                                   P+++ YN++I G  + GN++
Sbjct: 791 ---------------------------------------TPNVLIYNAVIAGHYREGNLD 811

Query: 514 GALKLFKELQLKGLRPDSVTYGTLING 540
            A +L  E+  KG+ PD  T+  L++G
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSG 838



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 9/313 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-----FDCQPDVYIYNA 138
           + ++ + S N+ V   V+  +I+G  KVG   KA E    M E       C      YN+
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS----YNS 589

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++  F++     A+A Y EM      PN++T++ L+NGL K+ + + A++M DEM  +G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  +   Y  +I G C+ +  + A  LF ++ + G +P    YN+L++GF  L  +  AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L +   KDG    LG+Y+ LIDGL +      A   Y +M    + PD ++Y V++ GL
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           S+ G+    +K+  +M++  + P+   YNA+I G    G LD+A  L  E+  +  LP+ 
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829

Query: 379 HTFTILICGMCRN 391
            TF IL+ G   N
Sbjct: 830 ATFDILVSGQVGN 842



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 249/556 (44%), Gaps = 67/556 (12%)

Query: 222 AYRLFLKMKDSGCSPDFV----AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           A  L  K+ DS  S  F     A+N LLN + K R+ D A+ ++    +   +P     +
Sbjct: 143 ASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
             +  L +     EA   Y +M    ++ D V   +++R      K  +A+++LS   ER
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEI-WKRDSLPNTHTFTILICGMCRNGMVDD 396
           G  PD+  Y+  ++  C    L  A SL  E+  K+  +P+  T+T +I    + G +DD
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322

Query: 397 AQK-----------------------------------LFNKMEKAGCFPSVGMFNALID 421
           A +                                   LF+KMEK G  P+   F+ LI+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382

Query: 422 GLCKAGELEKANLLFYKMEI-GKNPTLF--LRLSQG--GNRVHDKA-------------- 462
              K GE+EKA   + KME+ G  P++F    + QG    + H++A              
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLAN 442

Query: 463 --SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                T++   C  G   +A ++L ++   G  P++++YN+++ G C+  N++ A  +F 
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +  KGL+P++ TY  LI+G  R   E++A  +   M  +    +  VY++++   C+  
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562

Query: 581 KFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           + S A  L    + +    +S     S+  I+ F ++GE+++A+    EM        + 
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMSYNSI--IDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT  + GLC++ ++ +AL +   +      +  P+   LI G CKR  ++ A  +F   
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680

Query: 697 LKNGFILRPRVCNYLL 712
           L+ G      + N L+
Sbjct: 681 LEEGLNPSQPIYNSLI 696



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 56  KRKRL-RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           + KRL  S  S +++I    K    D      +E+    +S     +  L++G  K    
Sbjct: 576 EEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRM 635

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +MK    + D+  Y A+++   ++     A A++ E+++    P+   ++ L
Sbjct: 636 DQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSL 695

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+G    G    A+ +  +M + G+  +  TYT +I GL +      A  L+ +M+  G 
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD + Y  ++NG  K  +  + + +    +K+   P +  Y+ +I G +R    DEA+ 
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFR 815

Query: 295 WYRKMFEEKIEPDVVLYGVMIRG 317
            + +M ++ I PD   + +++ G
Sbjct: 816 LHDEMLDKGILPDGATFDILVSG 838


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 232/488 (47%), Gaps = 55/488 (11%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI  L  SG+T  A ++L         P+   Y  +++G C   + D A RL   M    
Sbjct: 110 LIKKLCASGRTADARRVLAASG-----PDVMVYNAMVAGYCGAGQLDAARRLVADMP--- 161

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD   YN L+ G C   R   ALA+L    + G +P + +Y+ L++   +   Y +A 
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
               +M ++   PD+V Y V++ G+ + G+V+DAM+ L ++   G  P+T  YN ++KG 
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                 + A  L  E+  +   PN  TF +LI  +CR G+V+ A ++  +M + GC P+ 
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N L+   CK  ++ KA      ME       F+ L        D  S  T++   C 
Sbjct: 342 LSYNPLLHAFCKQKKIHKA------ME-------FVELMVSRGCYPDIVSYNTLLTALCR 388

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A ++L QL + G  P +I+YN++I+G  K G    AL+L  E+  KGL+PD +T
Sbjct: 389 NGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIIT 448

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+ +GL R DR E+A R F ++   G  P+ A+Y +++   C+RR+   A  L+  Y+
Sbjct: 449 YSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLF-AYM 507

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                  +ES                                  YTI + GL  +G VKE
Sbjct: 508 ISSGCMPNEST---------------------------------YTILVEGLAYEGLVKE 534

Query: 654 ALNIFSVL 661
           A  +F+ L
Sbjct: 535 ARELFAQL 542



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 252/536 (47%), Gaps = 66/536 (12%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--- 100
           P+V       AA  +R  S AS +  + +L++    D   + +D L   N    + V   
Sbjct: 48  PRVAAYPAASAATPRRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPC 107

Query: 101 --FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA-VLNIAFRKQLFLLALAVYY 157
                 +    +  D  + L + G        PDV +YNA V       QL     A   
Sbjct: 108 AALIKKLCASGRTADARRVLAASG--------PDVMVYNAMVAGYCGAGQLD----AARR 155

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            +  +   P+  T++ LI GL   G+T  A+ +L++M +RG LP+  TYTI++   C+ +
Sbjct: 156 LVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRS 215

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              +A +L  +M D GC+PD V YN +LNG C+  RV++A+  L++    G  P   SY+
Sbjct: 216 GYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYN 275

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++ GLF A+R+++A     +M  +   P+VV + ++I  L   G V+ AM++L  M + 
Sbjct: 276 IVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQY 335

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P++  YN L+  FC    + +A      +  R   P+  ++  L+  +CRNG VD A
Sbjct: 336 GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVA 395

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +L ++++  GC P +  +N +IDGL KAG+ ++                          
Sbjct: 396 IELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE-------------------------- 429

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                                 A ++L ++   G  PDIITY+++ +G C+   I  A++
Sbjct: 430 ----------------------ALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            F ++Q  G+RP +  Y  ++ GL +     +A  +F  M  +GC P+ + Y  L+
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 235/532 (44%), Gaps = 67/532 (12%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTY----TIVISGLCQINRADEAYRLFLKMKDSG 233
           L + G+ + A++++D +   G+ P           +I  LC   R  +A R+      + 
Sbjct: 77  LVRRGELDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AA 129

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             PD + YNA++ G+C   ++D A  L+     E D +     +Y+ LI GL    R   
Sbjct: 130 SGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAY-----TYNTLIRGLCGRGRTSN 184

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A A    MF     PDVV Y +++    +    K AMKLL +M ++G  PD   YN ++ 
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G ++ A      +      PNT ++ I++ G+      +DA+KL  +M   GC P
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +V  FN LI  LC+ G +E A  +  +M + G  P              +  S   ++  
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP--------------NSLSYNPLLHA 350

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C    IHKA + +  +   G  PDI++YN+L+   C+ G ++ A++L  +L+ KG  P 
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            ++Y T+I+GL +  + ++A  +  +M   G  P    Y ++ +  CR  +   A   + 
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           + ++D+  R   ++                                 Y   L+GLC+  +
Sbjct: 471 K-VQDMGIRPTAAL---------------------------------YNAILLGLCKRRE 496

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              A+++F+ ++    +    +   L+ GL   G +  A ++F      G +
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 178/353 (50%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R  L    + + ++    K +G+    + LDE+     +     + V+++G  + G  E
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVE 253

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    +  + C+P+   YN VL   F  + +  A  +  EM    C PN+VTF++LI
Sbjct: 254 DAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLI 313

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + L + G  E A+++L++M Q G  PN  +Y  ++   C+  +  +A      M   GC 
Sbjct: 314 SFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCY 373

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V+YN LL   C+   VD A+ LL   +  G  P L SY+ +IDGL +A +  EA   
Sbjct: 374 PDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALEL 433

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + ++PD++ Y  +  GL    ++++A++    +++ GI P    YNA++ G C 
Sbjct: 434 LDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCK 493

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
                 A  L   +     +PN  T+TIL+ G+   G+V +A++LF ++   G
Sbjct: 494 RRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 188/393 (47%), Gaps = 15/393 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G    G    AL     M    C PDV  Y  +L    ++  +  A+ +  EM
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++++NG+ + G+ E A++ L  +   G  PN  +Y IV+ GL    R 
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A +L  +M   GC P+ V +N L++  C+   V+ A+ +L    + G  P   SY+ L
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +    + K+  +A  +   M      PD+V Y  ++  L   G+V  A++LL  ++++G 
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN +I G    G   +A  L  E+  +   P+  T++ +  G+CR   +++A +
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRV 458
            F K++  G  P+  ++NA++ GLCK  E   A +L  Y +  G  P             
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP------------- 514

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
            ++++   +VE     GL+ +A ++  QL   G
Sbjct: 515 -NESTYTILVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 239/511 (46%), Gaps = 32/511 (6%)

Query: 254 VDEALALLRSFEKDGFVP----RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           +D+AL L+ S    G  P     +G  + LI  L  + R  +A    R++      PDV+
Sbjct: 83  LDDALRLVDSLA--GLNPPSPAAVGPCAALIKKLCASGRTADA----RRVLAAS-GPDVM 135

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y  M+ G   AG++  A +L++DM    + PD Y YN LI+G C  G    A ++  ++
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           ++R  LP+  T+TIL+   C+      A KL ++M   GC P +  +N +++G+C+ G +
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           E A      ME  KN      L   G    +  S   +++   TA     A K++ ++A 
Sbjct: 253 EDA------MEFLKN------LPSYGCE-PNTVSYNIVLKGLFTAERWEDAEKLMEEMAH 299

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P+++T+N LI+  C+ G +  A+++ +++   G  P+S++Y  L++   +  +   
Sbjct: 300 KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHK 359

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSI 607
           A      M   GC P    Y +L+T  CR  +  +A  L L  L+D   S         I
Sbjct: 360 AMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL-LHQLKDKGCSPVLISYNTVI 418

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +   + G+ + A++ L EM  K     +  Y+    GLC++ +++EA+  F  + +    
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIR 478

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            T      ++ GLCKR     A+D+F Y + +G +        L+  L +    K+  A 
Sbjct: 479 PTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKE--AR 536

Query: 728 HLLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
            L  ++ S G      +   +  +L GP  T
Sbjct: 537 ELFAQLCSRGVVNKKLMKKGSIKMLDGPTQT 567



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 123/241 (51%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LIS   + G  E A+E   +M ++ C P+   YN +L+   +++    A+     M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V   C P+IV+++ L+  L ++G+ +VAI++L ++  +G  P   +Y  VI GL +  + 
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L  +M   G  PD + Y+ + +G C+  R++EA+      +  G  P    Y+ +
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI 487

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL + +    A   +  M      P+   Y +++ GL+  G VK+A +L + +  RG+
Sbjct: 488 LLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547

Query: 340 V 340
           V
Sbjct: 548 V 548



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 9/239 (3%)

Query: 4   TLNEVLTILDTVTPIEPALEPL--LP-------FLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           T N +++ L     +EPA+E L  +P        LS   +     K K       F    
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
             R       S + +++ L +    D+  + L +L+    S V   +  +I G  K G  
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +M     QPD+  Y+ + +   R+     A+  + ++  +   P    ++ +
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI 487

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           + GL K  +T  AI +   M   G +PN+ TYTI++ GL       EA  LF ++   G
Sbjct: 488 LLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 273/562 (48%), Gaps = 57/562 (10%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P+   Y  ++      +L   A+ +   M       ++VT+  LI GL  + + + A+
Sbjct: 111 CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAV 170

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +++ EM + GI PN   Y+ ++ G C+  R ++  ++F++M + G  PD V Y  L++  
Sbjct: 171 ELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSL 230

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK+ +  +A  ++    + G  P + +Y+ LI+ + +     EA    +KM E+ + PDV
Sbjct: 231 CKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDV 290

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIV-PDTYCYNALIKGFCDLGLLDQARSLQ 366
           V Y  +I+GLS+  ++ +AM LL +M R + IV P+   +N++I+G CD+G + QA  ++
Sbjct: 291 VTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + +   + N  T+ +LI G+ R   V  A +L ++M   G  P    ++ LI G CK 
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKM 410

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            ++++A  L   M + G  P LF          H    L  M EQ    G++ +A  +  
Sbjct: 411 WQVDRAEDLLSTMRDRGIEPELF----------HYIPLLVAMCEQ----GMMERARNLFN 456

Query: 486 QLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           ++    N P D++ Y+++I+G CK G++  A +L K +  +GL PD+VTY  +IN   + 
Sbjct: 457 EM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              E A  +  QM  +G  P  AV+ SL                                
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSL-------------------------------- 542

Query: 605 KSIEEFLQKGEVENAIQGLLEM---DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
             I+ +  KGE+   ++ + EM   +  L+   ++  +  L+   +   + ++L  FS  
Sbjct: 543 --IQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPDFSAE 600

Query: 662 VECKAIVTPPSCVKLIHGLCKR 683
           +    I +P   +K++H +C +
Sbjct: 601 ISKGNINSPQELMKVLHNVCPQ 622



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 234/460 (50%), Gaps = 20/460 (4%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  +RS  V      +  LI G     + +KA+E  G+M E   +P+V +Y+++L    +
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     V+ EM +    P++V ++ LI+ L K GK + A  ++D M +RG+ PN  T
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF- 264
           Y ++I+ +C+     EA  +  KM + G +PD V YN L+ G   +  +DEA+ LL    
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 265 -EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K+   P + +++ +I GL    R  +A+     M E     ++V Y ++I GL    K
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V+ AM+L+ +M   G+ PD++ Y+ LIKGFC +  +D+A  L   +  R   P    +  
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFP-SVGMFNALIDGLCKAGELEKA-NLLFYKMEI 441
           L+  MC  GM++ A+ LFN+M+    FP  V  ++ +I G CKAG+L+ A  LL   ++ 
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P              D  +   ++  +  +G +  A  +L Q+  SG LPD+  ++S
Sbjct: 496 GLTP--------------DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDS 541

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           LI G+   G IN  L+L +E+  K +  DS    TL   L
Sbjct: 542 LIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSL 581



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 231/514 (44%), Gaps = 69/514 (13%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMK---DSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  +Y  V++ LC+    D A  L   M       C P+ V+Y  L+   C  R  D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LLRS    G    + +Y  LI GL  A   D+A     +M E  IEP+VV+Y  +++G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            ++G+ +D  K+  +M E+GI PD   Y  LI   C +G   +A  +   + +R   PN 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+ +LI  MC+ G V +A  +  KM + G  P V  +N LI GL    E+++A  L  +
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 439 MEIGKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M  GKN   P +               +  ++++  C  G + +A+++   + E+G + +
Sbjct: 316 MVRGKNIVKPNVV--------------TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVN 361

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING---LQRVDREEDAFR 552
           ++TYN LI G  +V  +  A++L  E+   GL PDS TY  LI G   + +VDR ED   
Sbjct: 362 LVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED--- 418

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +   M   G  P    Y  L+   C                                  +
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMC----------------------------------E 444

Query: 613 KGEVENAIQGLLEMDFKLNDFQL--APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           +G +E A     EMD   N+F L    Y+  + G C+ G +K A  +   +V+    +TP
Sbjct: 445 QGMMERARNLFNEMD---NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD--EGLTP 499

Query: 671 PSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            +     +I+   K G ++ A  V      +GF+
Sbjct: 500 DAVTYSIVINMFAKSGDMEAANGVLKQMTASGFL 533



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 3/197 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  LL+ +      + +DE+ S  +   S  + +LI G+ K+   ++A +    M++  
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVA 187
            +P+++ Y  +L     + +   A  ++ EM   N  P ++V +S +I+G  K+G  + A
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNEMD--NNFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            ++L  +   G+ P+  TY+IVI+   +    + A  +  +M  SG  PD   +++L+ G
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG 545

Query: 248 FCKLRRVDEALALLRSF 264
           +     +++ L L+R  
Sbjct: 546 YSTKGEINKVLELIREM 562


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 262/581 (45%), Gaps = 56/581 (9%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAAKR+      S  
Sbjct: 67  ILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTY 126

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF---VLISGYYKVGDCEKALESFGK 123
            A+I  L     +   W+ + E+    + VV+       V + G  K+    KA+  F +
Sbjct: 127 MALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKM--VSKAIAIFYQ 184

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLLINGLSKSG 182
           +K   CQP    YN+++ +   +  +     +Y EM  + +C P+ +T+S LI+   K G
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244

Query: 183 KTEVAIKMLDEMTQRGILPNK-----------------------------------FTYT 207
           + + A ++L+EM + G+ P                                     FTYT
Sbjct: 245 RRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYT 304

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I GL +  R DEAY  F +M+  GC PD V  N ++N   K  R+D+A+ L +     
Sbjct: 305 ELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTL 364

Query: 268 GFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
             +P + +Y+ +I  LF +K R  E  +W+ +M E  I P    Y ++I G  +  +++ 
Sbjct: 365 RCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEK 424

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++I 
Sbjct: 425 AMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIK 484

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
            + + G +DDA  +F++M K GC P V  +NAL+ GL + G L++A     +M       
Sbjct: 485 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM------- 537

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                 Q    + D  S   ++      G  H+A ++L  + +S   PD+++YN+++   
Sbjct: 538 ------QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 591

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G    A KL +E+   G   D +TY +++  + +VD E
Sbjct: 592 SHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDHE 632



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 213/477 (44%), Gaps = 28/477 (5%)

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S ++  L  AK   +A A + ++   K +P    Y  MI  L   G+     +L ++M  
Sbjct: 163 SEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMST 222

Query: 337 RG-IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            G   PDT  Y+ALI  FC LG  D A  L  E+ +    P T  +T+LI    +   V 
Sbjct: 223 EGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVH 282

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A  LF +M    C P V  +  LI GL KAG +++A   FY+M+            + G
Sbjct: 283 GALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQ------------REG 330

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNING 514
            R  D   +  M+     AG +  A K+  ++     +P ++TYN++I   F      + 
Sbjct: 331 CRP-DTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
               F+ ++  G+ P S TY  LI+G  + +R E A  +  +M + G  P PA Y SL+ 
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 449

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              + +++ LA  L+ Q L++  G     + +  I+   + G +++AI    EM    N 
Sbjct: 450 ALGKAKRYDLACELF-QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEM----NK 504

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
              AP    Y   + GL + G + EAL+    + E   I    S   +++GL K G    
Sbjct: 505 LGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHR 564

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           AM++ L  +K   + RP V +Y       S       A  L+  M ++G++ D   Y
Sbjct: 565 AMEM-LSNMKQSTV-RPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITY 619



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 207/496 (41%), Gaps = 27/496 (5%)

Query: 97  VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V D  F+ I   +K G D EKALE    M   D      +    + +  + Q F  A   
Sbjct: 59  VLDERFIRILKIFKWGPDAEKALEVL--MLRVDHWLVREVMKTDIGVNVKMQFFRWAAK- 115

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI---LPNKFTYTIVISG 212
                + N   +  T+  LI  L    +     KM+ EM +  I    P + +  + + G
Sbjct: 116 -----RRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLG 170

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF-VP 271
             ++    +A  +F ++K   C P   AYN+++       +  +   L      +G   P
Sbjct: 171 NAKM--VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFP 228

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +YS LI    +  R D A     +M E  ++P   +Y ++I    +   V  A+ L 
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +MR +   PD + Y  LI+G    G +D+A     E+ +    P+T     +I  + + 
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +DDA KLF +M    C PSV  +N +I  L ++           K    + P+ F R+
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFES-----------KSRASEVPSWFERM 397

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            + G       +   +++ +C    + KA  +L ++ E G  P    Y SLI+   K   
Sbjct: 398 KESGISP-SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GC P    Y +
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 516

Query: 572 LMTWSCRRRKFSLAFS 587
           LM+   R      A S
Sbjct: 517 LMSGLARTGMLDEALS 532


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 165/609 (27%), Positives = 278/609 (45%), Gaps = 21/609 (3%)

Query: 97  VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           +  VF +LI  Y K G  + A+E+F  +     +P VY  N +L    + +   L  +++
Sbjct: 162 IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 221

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM      PN+ TF++LINGL   G  + A  +L +M + G +P   TY  +++  C+ 
Sbjct: 222 REMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKK 281

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R   A  L   M   G   D   YN  ++  C   R  +A  LL+   K+   P   +Y
Sbjct: 282 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 341

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+G  +  +   A   + +M +  + P+ V Y  +I G    G  ++A++LL  M  
Sbjct: 342 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 401

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+  +   Y  L+ G C     + A+ L   +   D +     +T+LI G+C+NGM+D+
Sbjct: 402 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 461

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A +L   M K G  P V  +++LI+G C+ G ++ A              +  R+ + G 
Sbjct: 462 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAK------------EIICRMYRSG- 508

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            V +K    T++  +C  G + +A K+   +  +G+  D  T N L++  C+ G +  A 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           K    +   GL P+S+TY  +ING   +    +AF  F  M + G  PS   Y SL+   
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           C+      A   +L  L  I G  D  M +  + E  + G +  A+  L +   + N   
Sbjct: 629 CKGGNLVEA-KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV-ALFDKMVQNNVLP 686

Query: 635 LA-PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMD 691
            +  Y+  L GLC+ G+   A+ +F   +  +  + P   +   L+ GL K G+   A  
Sbjct: 687 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMG-RGTLFPNHVMYTCLVDGLSKAGHPKAAFY 745

Query: 692 VFLYTLKNG 700
            F   +K G
Sbjct: 746 FFEEMMKKG 754



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 173/707 (24%), Positives = 305/707 (43%), Gaps = 54/707 (7%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ ++K    +L W    E+    +      F +LI+G    G+ +KA     +M+E  
Sbjct: 204 ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 263

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P +  YN +LN   +K  +  A+ +   M+      ++ T+++ I+ L  + ++  A 
Sbjct: 264 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 323

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L +M +  I PN+ TY  +I+G  +  +   A ++F +M     SP+ V YNAL+ G 
Sbjct: 324 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 383

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C +   +EAL LL   E  G      +Y  L++GL + ++++ A     +M    +    
Sbjct: 384 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 443

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y V+I GL + G + +A++L+ +M + G+ PD   Y++LI GFC +G +  A+ +   
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +++   + N   ++ LI   C++G V +A K++  M   G        N L+  LC+ G+
Sbjct: 504 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 563

Query: 429 L-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           L E    L +   IG  P              +  +   ++  Y + G    A+     +
Sbjct: 564 LGEAEKFLCHMSRIGLVP--------------NSITYDCIINGYGSIGDPLNAFSFFDDM 609

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G  P   TY SL+ G CK GN+  A K    L       DSV Y TL+    +    
Sbjct: 610 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 669

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR------------- 594
            +A  +F +M QN   P    Y SL+T  CR+ K   A  L+   +              
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729

Query: 595 -----DISGRDDESMKSIEEFLQKGEVENAIQGLLEMD--------FKLNDF-------- 633
                  +G    +    EE ++KG   + +     +D         K NDF        
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789

Query: 634 ---QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               LA Y I L G  +   +   L+++S ++         +   LI GL K G  DL +
Sbjct: 790 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            +    +  G +      N L+    +S+  K   A+ L+  M ++G
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINK--YSESGKMRKAFDLVNFMNTLG 894



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 181/753 (24%), Positives = 296/753 (39%), Gaps = 129/753 (17%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L ++R   +S     +  LI+G+ K G    A + F +M +FD  P+   YNA++     
Sbjct: 326  LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 385

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               F  AL +   M       N VT+  L+NGL K  K E+A ++L+ M    ++     
Sbjct: 386  VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 445

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            YT++I GLC+    DEA +L   M   G +PD + Y++L+NGFC++  +  A  ++    
Sbjct: 446  YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 505

Query: 266  KDGFVPRLGSYSCLI-----------------------------------DGLFRAKRYD 290
            + G V     YS LI                                     L R  +  
Sbjct: 506  RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 565

Query: 291  EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            EA  +   M    + P+ + Y  +I G    G   +A     DM + G  P  + Y +L+
Sbjct: 566  EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 625

Query: 351  KGFCDLGLLDQAR-----------------------------------SLQVEIWKRDSL 375
            KG C  G L +A+                                   +L  ++ + + L
Sbjct: 626  KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 685

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P+++T++ L+ G+CR G    A  LF   M +   FP+  M+  L+DGL KAG   KA  
Sbjct: 686  PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH-PKAAF 744

Query: 435  LFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             F++  M+ G  P              D  +   +++     G + KA      +   G 
Sbjct: 745  YFFEEMMKKGTCP--------------DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 790

Query: 493  LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             P++ TYN L++GF K   +   L L+  +  +G+ PD +T+ +LI GL +    +   +
Sbjct: 791  CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 850

Query: 553  IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL--WLQYLRDISGRDD--------- 601
            + G+M   G       +  L+       K   AF L  ++  L     RD          
Sbjct: 851  LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 910

Query: 602  ------ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                  ES   + E L+ G +    Q                Y   + G+C+ G ++ A 
Sbjct: 911  KKSAFRESTVVLHEMLENGVIPKHAQ----------------YITLINGMCRVGDIQGA- 953

Query: 656  NIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
              F +  E +A+      V    ++ GL   G  + AM V  + L+    L P +  +  
Sbjct: 954  --FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR--MRLLPTIATFTT 1009

Query: 713  RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                F +D K   A  L   M+  G  LD   Y
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1042



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 240/520 (46%), Gaps = 14/520 (2%)

Query: 43   NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
            +P   F FF    K  +  SF +  +++  L K        + L+ L     +V S ++ 
Sbjct: 598  DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 657

Query: 103  VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY-YEMVK 161
             L++   K G+  +A+  F KM + +  PD Y Y+++L    RK   + A+ ++   M +
Sbjct: 658  TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 717

Query: 162  LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
                PN V ++ L++GLSK+G  + A    +EM ++G  P+   +  +I    +  +  +
Sbjct: 718  GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 777

Query: 222  AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            A   F  M+  G  P+   YN LL+GF K + +   L+L  +  ++G  P   ++  LI 
Sbjct: 778  ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 837

Query: 282  GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            GL ++   D       KM  E    D   + ++I   SE+GK++ A  L++ M   G+ P
Sbjct: 838  GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 897

Query: 342  DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
            D   YN +  G        ++  +  E+ +   +P    +  LI GMCR G +  A KL 
Sbjct: 898  DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 957

Query: 402  NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            ++ME  G        +A++ GL   G+ E A L+   M       L +RL      +   
Sbjct: 958  DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM-------LRMRL------LPTI 1004

Query: 462  ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            A+  T++ ++C    I +A K+   +   G   D++ YN LI G C  G+   A +L++E
Sbjct: 1005 ATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEE 1064

Query: 522  LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            ++ + L P+  TY  L++ +   +      ++   + + G
Sbjct: 1065 MRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 215/471 (45%), Gaps = 14/471 (2%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            L+ G  K G+  +A +   ++       D  +YN +L    +      A+A++ +MV+ N
Sbjct: 624  LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEA 222
             LP+  T+S L+ GL + GK   A+ +      RG L PN   YT ++ GL +      A
Sbjct: 684  VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 743

Query: 223  YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +  F +M   G  PD VA+NA+++   +  ++ +A     +    G  P L +Y+ L+ G
Sbjct: 744  FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 803

Query: 283  LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              + +      + Y  M  E I PD + +  +I GLS++G     +KLL  M   G + D
Sbjct: 804  FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 863

Query: 343  TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             + +N LI  + + G + +A  L   +      P+  T+  +  G+ +     ++  + +
Sbjct: 864  QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLH 923

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +M + G  P    +  LI+G+C+ G+++ A  L  +ME          L  G + V + A
Sbjct: 924  EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME---------ALGFGSHEVAESA 974

Query: 463  SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                MV      G    A  +L  +     LP I T+ +L++ FC+   I  ALKL   +
Sbjct: 975  ----MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1030

Query: 523  QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +L GL+ D V Y  LI G+        AF ++ +M      P+   Y  L+
Sbjct: 1031 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1081



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F +LI+ Y + G   KA +    M      PD   YN + N   +K  F  +  V +EM
Sbjct: 866  TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 925

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++   +P    +  LING+ + G  + A K+ DEM   G   ++   + ++ GL    + 
Sbjct: 926  LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 985

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            ++A  +   M      P    +  L++ FC+  ++ EAL L    E  G    + +Y+ L
Sbjct: 986  EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVL 1045

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I G+        A+  Y +M    + P++  Y V++  +S A  +    KLL+D++ERG+
Sbjct: 1046 IMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105

Query: 340  V 340
            +
Sbjct: 1106 I 1106



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 86/207 (41%)

Query: 69   VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
            + + L K + F      L E+    V      +  LI+G  +VGD + A +   +M+   
Sbjct: 905  IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964

Query: 129  CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
                    +A++           A+ V   M+++  LP I TF+ L++   +  K   A+
Sbjct: 965  FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1024

Query: 189  KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            K+   M   G+  +   Y ++I G+C    +  A+ L+ +M+     P+   Y  L++  
Sbjct: 1025 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084

Query: 249  CKLRRVDEALALLRSFEKDGFVPRLGS 275
                 + +   LL   ++ G +   GS
Sbjct: 1085 SAANNLIQGEKLLTDLQERGLISWGGS 1111


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 268/618 (43%), Gaps = 101/618 (16%)

Query: 36  SVIMKTKNPQVGF-------RFFIWAAKRKRLRSFASNS--AVISMLLKPNGFDLYWQTL 86
           S+  K K  QVGF          +  AKRK   + +S    AV++ +L P     Y+ ++
Sbjct: 55  SIWEKHKERQVGFGGVAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSV 114

Query: 87  DEL---------------------RSGNVSVVSDV------------FFVLISGYYKVGD 113
            E+                     R G++ VV ++            + ++  G +  G 
Sbjct: 115 AEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGG 174

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
             +   +FGKM+E     + Y YN ++++  +  L   AL +Y  MV     P++ TFS 
Sbjct: 175 LRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSA 234

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L+    K   TE    +L+EM   G+ PN +TYTI I  L    RA              
Sbjct: 235 LMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL---GRAG------------- 278

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
                              R+DEA  +++  E DG  P + +Y+ LID L  A + D+A 
Sbjct: 279 -------------------RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + KM     +PD V Y  M+   S+ G +    +  S+M   G  PD   +  L+   
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G +D+A  L   + K+  LPN HT+  LI G+ R   +DDA  LFN ME  G  P+ 
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTA 439

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEI-GKNP----------------------TLFLR 450
             +   ID   K+G  +KA   F KM+I G  P                       +F R
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNR 499

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           L   G    D  +   M++ Y  AG + +A ++L  ++E+   PDII  NSLIN   K G
Sbjct: 500 LKSNG-LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A K+F  L+   L P  VTY TLI GL +  + + A  +F  M  NGC P+   + 
Sbjct: 559 RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFN 618

Query: 571 SLMTWSCRRRKFSLAFSL 588
           +++   C+  +  LA  +
Sbjct: 619 TILDCLCKNDEVDLALKM 636



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 191/715 (26%), Positives = 312/715 (43%), Gaps = 81/715 (11%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             + VLI      G  + A+E F KMK    +PD   Y  +L+              + EM
Sbjct: 301  TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM 360

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  P+++TF++L+N L K+G  + A  +LD M ++G+LPN  TY  +ISGL ++NR 
Sbjct: 361  EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRL 420

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D+A  LF  M+  G  P    Y   ++ + K  R D+AL      +  G  P + + +  
Sbjct: 421  DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNAS 480

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +  L    R  EA   + ++    + PD V Y +M++  S+AG+V +A++LLSDM E   
Sbjct: 481  LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQC 540

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             PD    N+LI      G +D+A  +   +      P   T+  LI G+ + G V  A +
Sbjct: 541  EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAME 600

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------------EIGKNPT 446
            LF  M   GC P+   FN ++D LCK  E++ A  + YKM              I     
Sbjct: 601  LFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLV 660

Query: 447  LFLRLSQGGNRVH--------DKASLQTMVEQYCTAGLIHKAYKI--------------- 483
            +  R+S      H        D  +L T++      GL+  A+KI               
Sbjct: 661  IEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRR 720

Query: 484  ----LMQ--LAESGNLPDIITYNSLING-FCKVGNI------------------NGALKL 518
                LM   L ++G    I+  + L+ G  CK G++                  +  ++ 
Sbjct: 721  FWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRF 780

Query: 519  FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             KEL   G++P   +Y  LI G   V  +E A+ +F +M   GC P    Y  L+    +
Sbjct: 781  TKEL---GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGK 837

Query: 579  RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL--NDFQLA 636
              K +  F L+ Q +      +  +   I   L K    N++   L++ + L   DF   
Sbjct: 838  SGKINELFELYEQMICSSCKPNTITHNIIIANLVK---SNSLDKALDLFYDLVSGDFSPT 894

Query: 637  P--YTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVK--LIHGLCKRGYLDLAM 690
            P  Y   L GL + G+++EA  +F  +V+  C+    P + +   LI+G  K G ++ A 
Sbjct: 895  PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR----PNNAIYNILINGFGKTGDVNTAC 950

Query: 691  DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            ++F   ++ G  +RP + +Y        +  +   A H   ++K  G  LD+  Y
Sbjct: 951  ELFKRMVREG--IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAY 1003



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 172/698 (24%), Positives = 307/698 (43%), Gaps = 99/698 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+    K  D E       +M+    +P++Y Y   + +  R      A  +   M
Sbjct: 231 TFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRM 290

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVA-------------------IKMLD-------- 192
               C P++VT+++LI+ L  +GK + A                   I MLD        
Sbjct: 291 EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDL 350

Query: 193 --------EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                   EM   G  P+  T+TI+++ LC+    DEA+ L   M+  G  P+   YN L
Sbjct: 351 GRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTL 410

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++G  ++ R+D+AL L  + E  G VP   +Y   ID   ++ R D+A   + KM    I
Sbjct: 411 ISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGI 470

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P++V     +  L+E G++++A  + + ++  G+ PD+  YN ++K +   G +D+A  
Sbjct: 471 APNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIE 530

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++ +    P+      LI  + + G VD+A K+F +++     P+V  +N LI GL 
Sbjct: 531 LLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLG 590

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K G++++A  LF  M     P              +  +  T+++  C    +  A K+L
Sbjct: 591 KEGQVQRAMELFASMTGNGCPP-------------NTITFNTILDCLCKNDEVDLALKML 637

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++     +PD++T+N++I+G      ++ A+ LF +++ K L PD VT  TL+ G+ + 
Sbjct: 638 YKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKN 696

Query: 545 DREEDAFRIF---------------------GQMPQNGCTPS---------------PAV 568
              EDAF+I                      G + Q G   +                +V
Sbjct: 697 GLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSV 756

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLL 624
              ++   C+ ++  +A S+++++ +++  +   +++S    IE FL     E A     
Sbjct: 757 LMPIIKVLCKHKQALVAQSVFIRFTKELGVK--PTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVKLIHGLCK 682
           EM        +  Y + L    + G++ E   ++  ++   CK      + +  I  L K
Sbjct: 815 EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII--IANLVK 872

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFS 718
              LD A+D+F Y L +G    P  C Y  LL  LL S
Sbjct: 873 SNSLDKALDLF-YDLVSG-DFSPTPCTYGPLLDGLLKS 908



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/577 (24%), Positives = 247/577 (42%), Gaps = 84/577 (14%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I+ L K    D  W+    L+   ++     +  LI+G  K G  ++A+E F  M  
Sbjct: 548  NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS------- 179
              C P+   +N +L+   +     LAL + Y+M  +NC+P+++TF+ +I+GL        
Sbjct: 608  NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667

Query: 180  ---------------------------KSGKTEVAIKMLDEMTQR--------------- 197
                                       K+G  E A K+ ++   R               
Sbjct: 668  AIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMG 727

Query: 198  GILPNKFTYTIVISG---------------------LCQINRADEAYRLFLKM-KDSGCS 235
            GIL    T   ++ G                     LC+  +A  A  +F++  K+ G  
Sbjct: 728  GILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVK 787

Query: 236  PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            P   +YN L+ GF  +   + A  L    +  G  P + +Y+ L+D   ++ + +E +  
Sbjct: 788  PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFEL 847

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            Y +M     +P+ + + ++I  L ++  +  A+ L  D+      P    Y  L+ G   
Sbjct: 848  YEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLK 907

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
             G L++A+ L  E+      PN   + ILI G  + G V+ A +LF +M + G  P +  
Sbjct: 908  SGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKS 967

Query: 416  FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            + +L+  LC+AG ++ A   F K+   K   L+L          D  +   M++    + 
Sbjct: 968  YTSLVGCLCEAGRVDDALHYFEKL---KQTGLYL----------DSIAYNLMIDGLGRSH 1014

Query: 476  LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
             I +A  +  ++   G  PD+ TYNSLI      G +  A KL++ELQ  GL P+  TY 
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074

Query: 536  TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             LI G       + A+ ++ +M   GC+P+   +  L
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 166/667 (24%), Positives = 300/667 (44%), Gaps = 56/667 (8%)

Query: 32   TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
            T + + + K  N    F       K+  L +  + + +IS LL+ N  D      + + +
Sbjct: 373  TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
              V   +  + + I  Y K G  +KALE+F KMK     P++   NA L  +  +   L 
Sbjct: 433  LGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASL-YSLAEMGRLR 491

Query: 152  ALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
               V +  +K N L P+ VT+++++   SK+G+ + AI++L +M++    P+      +I
Sbjct: 492  EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLI 551

Query: 211  SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            + L +  R DEA+++F ++KD   +P  V YN L+ G  K  +V  A+ L  S   +G  
Sbjct: 552  NTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCP 611

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            P   +++ ++D L +    D A     KM      PDV+ +  +I GL    +V DA+ L
Sbjct: 612  PNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWL 671

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF--------- 381
               M++  + PD      L+ G    GL++ A  +  +   R  +     F         
Sbjct: 672  FHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGIL 730

Query: 382  -------TI-----LICG---------------MCRNGMVDDAQKLFNKMEKA-GCFPSV 413
                   TI     L+CG               +C++     AQ +F +  K  G  P++
Sbjct: 731  TQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTL 790

Query: 414  GMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
              +N LI+G       E A  LF +M+  G  P +F              +   +++ + 
Sbjct: 791  ESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVF--------------TYNLLLDAHG 836

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             +G I++ +++  Q+  S   P+ IT+N +I    K  +++ AL LF +L      P   
Sbjct: 837  KSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPC 896

Query: 533  TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
            TYG L++GL +  R E+A  +F +M   GC P+ A+Y  L+    +    + A  L+ + 
Sbjct: 897  TYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRM 956

Query: 593  LRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
            +R+    D +S  S+   L + G V++A+    ++           Y + + GL +  ++
Sbjct: 957  VREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRI 1016

Query: 652  KEALNIF 658
            +EAL ++
Sbjct: 1017 EEALTLY 1023



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 250/559 (44%), Gaps = 59/559 (10%)

Query: 59   RLRS--FASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            RL+S   A +S   +M++K        D   + L ++          V   LI+  YK G
Sbjct: 499  RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558

Query: 113  DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
              ++A + F ++K+    P V  YN ++    ++     A+ ++  M    C PN +TF+
Sbjct: 559  RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFN 618

Query: 173  LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
             +++ L K+ + ++A+KML +MT    +P+  T+  +I GL    R  +A  LF +MK  
Sbjct: 619  TILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM 678

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALL------------RSFEKD---GFVPRLGSYS 277
              +PD V    LL G  K   +++A  +             R F +D   G + + G+  
Sbjct: 679  -LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEK 737

Query: 278  CLIDG---------------------LFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMI 315
             ++ G                     L + K+   A + + +  +E  ++P +  Y  +I
Sbjct: 738  TILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLI 797

Query: 316  RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             G       + A  L ++M+  G  PD + YN L+      G +++   L  ++      
Sbjct: 798  EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK 857

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            PNT T  I+I  + ++  +D A  LF  +      P+   +  L+DGL K+G LE+A  L
Sbjct: 858  PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917

Query: 436  FYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
            F +M + G  P              + A    ++  +   G ++ A ++  ++   G  P
Sbjct: 918  FEEMVDYGCRP--------------NNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963

Query: 495  DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            D+ +Y SL+   C+ G ++ AL  F++L+  GL  DS+ Y  +I+GL R  R E+A  ++
Sbjct: 964  DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023

Query: 555  GQMPQNGCTPSPAVYKSLM 573
             +M   G  P    Y SL+
Sbjct: 1024 DEMQSRGINPDLFTYNSLI 1042



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 183/368 (49%), Gaps = 16/368 (4%)

Query: 174  LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            +I  L K  +  VA  +    T+  G+ P   +Y  +I G   ++  + A+ LF +MK++
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            GC+PD   YN LL+   K  +++E   L          P   +++ +I  L ++   D+A
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879

Query: 293  YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               +  +      P    YG ++ GL ++G++++A +L  +M + G  P+   YN LI G
Sbjct: 880  LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939

Query: 353  FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            F   G ++ A  L   + +    P+  ++T L+  +C  G VDDA   F K+++ G +  
Sbjct: 940  FGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLD 999

Query: 413  VGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
               +N +IDGL ++  +E+A  L+ +M+  G NP LF              +  +++   
Sbjct: 1000 SIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLF--------------TYNSLILNL 1045

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
              AG++ +A K+  +L   G  P++ TYN+LI G+   GN + A  ++K + + G  P++
Sbjct: 1046 GVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNT 1105

Query: 532  VTYGTLIN 539
             T+  L N
Sbjct: 1106 GTFAQLPN 1113



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 171/354 (48%), Gaps = 5/354 (1%)

Query: 34   VTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
            +  V+ K K   V    FI   K   ++ +  S + +I   L  +  ++ W    E++  
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMK-- 817

Query: 93   NVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
            N     DVF   +L+  + K G   +  E + +M    C+P+   +N ++    +     
Sbjct: 818  NAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLD 877

Query: 151  LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
             AL ++Y++V  +  P   T+  L++GL KSG+ E A ++ +EM   G  PN   Y I+I
Sbjct: 878  KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937

Query: 211  SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            +G  +    + A  LF +M   G  PD  +Y +L+   C+  RVD+AL      ++ G  
Sbjct: 938  NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
                +Y+ +IDGL R+ R +EA   Y +M    I PD+  Y  +I  L  AG V+ A KL
Sbjct: 998  LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
              +++  G+ P+ + YNALI+G+   G  D A ++   +      PNT TF  L
Sbjct: 1058 YEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 208/492 (42%), Gaps = 61/492 (12%)

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +R  +    +  M  + I+ D+  Y ++ +GL   G ++        MRE G   + Y Y
Sbjct: 138 RRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSY 197

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSL----PNTHTFTILICGMCRNGMVDDAQKLFN 402
           N LI      GL  +A    +E+++R  L    P+  TF+ L+    +    +  + L  
Sbjct: 198 NGLIHLLLQSGLCREA----LEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLE 253

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +ME  G  P++  +   I  L +AG +++A  +  +ME  G  P              D 
Sbjct: 254 EMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGP--------------DV 299

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  CTAG +  A ++ +++  S + PD +TY ++++ F   G++    + + E
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSE 359

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++  G  PD +T+  L+N L +    ++AF +   M + G  P+   Y +L++   R  +
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419

Query: 582 FSLAFSLW------------LQYLRDI-----SGRDDESMKSIEEFLQKGEVEN------ 618
              A  L+              Y+  I     SGR D+++++ E+   +G   N      
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479

Query: 619 AIQGLLEMDF---------KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECK 665
           ++  L EM           +L    LAP    Y + +    + GQV EA+ + S + E +
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
                     LI+ L K G +D A  +F   LK+   L P V  Y        K+ +   
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFC-RLKD-MKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 726 AYHLLCRMKSVG 737
           A  L   M   G
Sbjct: 598 AMELFASMTGNG 609



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%)

Query: 110  KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
            + G  + AL  F K+K+     D   YN +++   R      AL +Y EM      P++ 
Sbjct: 977  EAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLF 1036

Query: 170  TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            T++ LI  L  +G  E A K+ +E+   G+ PN FTY  +I G      +D AY ++ +M
Sbjct: 1037 TYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096

Query: 230  KDSGCSPDFVAYNALLN 246
               GCSP+   +  L N
Sbjct: 1097 MVGGCSPNTGTFAQLPN 1113


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 262/581 (45%), Gaps = 59/581 (10%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS---AVISMLLKPNGFDLYWQ 84
            L+ +   S+    +NP    +F  W +      + A NS   A+ + L +     L   
Sbjct: 72  LLNPSYAVSIFQNQQNPSHAIKFHSWLSHVNPTLA-AHNSVHRALRNTLHRKGPALLSVD 130

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            L ELR+    V  D+   L++ + ++G    +   F ++      P   +YNA+++   
Sbjct: 131 LLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALV 190

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +     LA   + +M   NC+ +  T++ LI+G+ K G  + A++++ +M  +G  PN F
Sbjct: 191 KSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVF 250

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TYT++I G C  +R DEA+ +F  MKDSG  P+     AL++G  +     +AL LL  F
Sbjct: 251 TYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEF 310

Query: 265 ----------------------------------------EKDGFVPRLGSYSCLIDGLF 284
                                                    + G+ P    ++ ++  L 
Sbjct: 311 LDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLV 370

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +     E    +  + ++ ++  +  Y  +I  L +    ++  ++   +   G++ + +
Sbjct: 371 KGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVF 430

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN +I  FC   L+D A     ++  R  +PN  TF  LI G C++G +D A+KL   +
Sbjct: 431 SYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESL 490

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKAS 463
            + G  P +  F++++DGLC+    E+A   F +M E G NP   +              
Sbjct: 491 LENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVI-------------- 536

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++   CT G + ++ K+L ++ + G  PD  +YN+LI  FC++  +  A KLF  + 
Sbjct: 537 YNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMS 596

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             GL PD+ TY   I  L    R E+A ++F  M  NGC+P
Sbjct: 597 RSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSP 637



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 147/259 (56%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LI  L K+   E   ++  ++   G++ N F+Y ++I+  C+    D A   F  M+  G
Sbjct: 400 LIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRG 459

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+ V +N L+NG CK   +D+A  LL S  ++G  P + ++S ++DGL + KR +EA 
Sbjct: 460 VVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEAL 519

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M E  I P+ V+Y ++IR L   G V  ++KLL  M++ GI PDTY YNALI+ F
Sbjct: 520 ECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIF 579

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +  +++A+ L   + +    P+ +T++  I  +  +G +++A+K+F  ME  GC P  
Sbjct: 580 CRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDS 639

Query: 414 GMFNALIDGLCKAGELEKA 432
            + N +I  L +   +E+A
Sbjct: 640 YICNLIIKILVQQEYVEEA 658



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 7/322 (2%)

Query: 63  FASNSA---VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           F  NS    V++ L+K           + LR   V      +  LI   YK    E+   
Sbjct: 356 FPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDR 415

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            +G++       +V+ YN ++N   R +L   A   + +M     +PN+VTF+ LING  
Sbjct: 416 VYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHC 475

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G  + A K+L+ + + G+ P+ FT++ ++ GLCQI R +EA   F +M + G +P+ V
Sbjct: 476 KDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAV 535

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L+   C +  V  ++ LLR  +K+G  P   SY+ LI    R  + ++A   +  M
Sbjct: 536 IYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSM 595

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
               + PD   Y   I  LSE+G++++A K+   M   G  PD+Y  N +IK       +
Sbjct: 596 SRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYV 655

Query: 360 DQARSLQVEIWKR----DSLPN 377
           ++A+++     ++    +S+PN
Sbjct: 656 EEAQNIIERCRQKGISLNSIPN 677



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/561 (23%), Positives = 249/561 (44%), Gaps = 34/561 (6%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L N L + G   +++ +L E+   G    +     +++   ++  A+ +  +F ++   G
Sbjct: 115 LRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLG 174

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            SP    YNAL++   K   +D A    +    D  V    +Y+ LI G+ +    DEA 
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              R+M ++   P+V  Y ++I G   A +V +A  +   M++ G+ P+     AL+ G 
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGV 294

Query: 354 CDLGLLDQARSLQV--EIWKRDSLPNTHTF-----TILICGMCRNGMVDDAQKLFNK-ME 405
                +D +++L++  E   R+       F     T+L C +  N M  +      + + 
Sbjct: 295 --FRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYC-LANNSMAKEMVVFLRRVLG 351

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLF-------YKMEIGKNPTLFLRL-----SQ 453
           + G FP   +FN ++  L K  EL +   +F        K  IG    L   L      +
Sbjct: 352 RGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWRE 411

Query: 454 GGNRVHDKA----------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            G+RV+ +           S   ++  +C A L+  A +    +   G +P+++T+N+LI
Sbjct: 412 EGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLI 471

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG CK G I+ A KL + L   GL+PD  T+ ++++GL ++ R E+A   F +M + G  
Sbjct: 472 NGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGIN 531

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQG 622
           P+  +Y  L+   C     + +  L  +  ++    D  S  + I+ F +  +VE A + 
Sbjct: 532 PNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKL 591

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
              M     +     Y+ ++  L + G+++EA  +F  +           C  +I  L +
Sbjct: 592 FDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQ 651

Query: 683 RGYLDLAMDVFLYTLKNGFIL 703
           + Y++ A ++     + G  L
Sbjct: 652 QEYVEEAQNIIERCRQKGISL 672



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/510 (23%), Positives = 207/510 (40%), Gaps = 61/510 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L+K N  DL +    ++ + N       +  LI G  KVG  ++AL    +MK+
Sbjct: 183 NALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKD 242

Query: 127 FDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
               P+V+ Y  ++    IA R      A  V+  M      PN  T   L++G+ +   
Sbjct: 243 KGHFPNVFTYTMLIEGFCIASRVDE---AFGVFETMKDSGVYPNEATVRALVHGVFRCVD 299

Query: 184 TEVAIKMLDEMTQR----------------------------------------GILPNK 203
              A+++L E   R                                        G  P  
Sbjct: 300 PSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGN 359

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             + +V++ L +     E   +F  ++  G      AY AL+    K    +E   +   
Sbjct: 360 SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQ 419

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              DG +  + SY+ +I+   RAK  D A   +R M    + P++V +  +I G  + G 
Sbjct: 420 LISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGA 479

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A KLL  + E G+ PD + +++++ G C +   ++A     E+ +    PN   + I
Sbjct: 480 IDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNI 539

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IG 442
           LI  +C  G V  + KL  +M+K G  P    +NALI   C+  ++EKA  LF  M   G
Sbjct: 540 LIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSG 599

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            NP              D  +    +E    +G + +A K+   +  +G  PD    N +
Sbjct: 600 LNP--------------DNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLI 645

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSV 532
           I    +   +  A  + +  + KG+  +S+
Sbjct: 646 IKILVQQEYVEEAQNIIERCRQKGISLNSI 675



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 27/241 (11%)

Query: 494 PDIITYNS----LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           P +  +NS    L N   + G    ++ L +EL+  G R        L+    R+     
Sbjct: 103 PTLAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANY 162

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IE 608
           +  +F Q+   G +P+  +Y +L+    +     LA+  + Q   D    D  +  + I 
Sbjct: 163 SAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIH 222

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
              + G V+ A++ + +M  K +   +  YT+ + G C   +V EA  +F  + +     
Sbjct: 223 GVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYP 282

Query: 669 TPPSCVKLIHGLCK----------------------RGYLDLAMDVFLYTLKNGFILRPR 706
              +   L+HG+ +                      R +  LA D  LY L N  + +  
Sbjct: 283 NEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEM 342

Query: 707 V 707
           V
Sbjct: 343 V 343


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 160/634 (25%), Positives = 276/634 (43%), Gaps = 70/634 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y   GD   A +    +      PD Y Y + +    R  +   A  V+  M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               CL    T++ L++GL  +G    A+ +   M      P+   Y  ++ GLC+  R 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  +   +G  P+ V YNAL++G+C    ++ AL +    + +   P + +Y+ L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL ++ + + A   + +M E  +EP+VV Y  +I+G    G ++ A +LL  M   G+
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+ + ++ LI   C    +++A+     + K+    N   +T LI G+C+ G +D A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL----- 451
           L  KM   G  P    +++LIDGLC+  +L +A L+   M    I  +P  +  +     
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 452 ----SQGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
               S+G  ++ DK           +    V  YC  G +  A  +++Q+ + G  P+++
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL-------------------- 537
           TYN+LI G+  +G ++ A   F+ +  KG +P+  +Y  L                    
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 538 ---------------------------INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
                                      I  L RVDR E+A   F  M     TPS  VY 
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFK 629
           S++   CR +  + A +L     +       ES +  I    + G    A +   ++  K
Sbjct: 614 SIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLK 673

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            +++    + I + GL Q G V E  ++ SV+ E
Sbjct: 674 ESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKE 707



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 233/516 (45%), Gaps = 60/516 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI GY   G+ E AL+ F  M    C P+V  Y  +++   +      A+ ++  M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    PN+VT++ LI G    G  + A ++L  M   G++PN +T++++I  LC+  + 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA      +   G   + V Y +L++G CK  ++D A  L++    +GFVP   SYS L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIE---------------------------------- 305
           IDGL R K+  +A      M E+ I+                                  
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 306 -PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD+V Y V +R   E G+++DA  ++  M +RG+ P+   YN LI+G+ +LGL+ QA S
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVD------------DAQKLFNKMEKAGCFPS 412
               +  +   PN  ++T+L+  + +    D            D Q L   + +     +
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +++  I  LC+   LE+A   F  M             Q  N    +    ++++  C
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGM-------------QNANLTPSEDVYTSIIDCCC 620

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
              ++  A  +L  + +SG LP + +Y  +I+  C+ GN   A ++F +L LK    D +
Sbjct: 621 RLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEI 680

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            +  LI GL +     +   +   M ++G  PS  +
Sbjct: 681 VWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTI 716



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 198/425 (46%), Gaps = 13/425 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+ T++ LIN    +G    A + L  +   G+ P+ + YT  + G C+      A R+F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           + M   GC      Y ALL+G      V EA+A+      D   P    Y+ ++ GL  A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R +EA     +      EP++V+Y  +I G   AG+++ A+K+   M      P+   Y
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LI G C  G +++A  L   + +    PN  T+T LI G C  G +  A +L + ME 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P+   F+ LID LCK  ++E+A L                L + G +V ++    +
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGS------------LVKKGVKV-NEVVYTS 357

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C  G I  A +++ ++   G +PD  +Y+SLI+G C+   ++ A  + +++  KG
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           ++   VTY  +I+ L R    E   +IF +M   G  P    Y   +   C   +   A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 587 SLWLQ 591
           S+ +Q
Sbjct: 478 SMIVQ 482



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 28/406 (6%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +     ++  L+      D   L S M  R +      Y  LI  +C  G +  A+  
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNL----RTYTTLINAYCLAGDIPAAKQH 94

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+++ +T  + G CR GM+  A ++F  M   GC  +   + AL+ GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AG + +A  +F  M             +  +   D     TMV   C AG   +A  +L 
Sbjct: 155 AGMVREAMAVFVGM-------------RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +   +G  P+I+ YN+LI+G+C  G +  ALK+F+ +      P+  TY  LI+GL +  
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG 261

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG---RDDE 602
           + E A  +F +M + G  P+   Y +L+   C       AF L   +L + +G    D  
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL--HLMETNGLVPNDWT 319

Query: 603 SMKSIEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
               I+   ++ +VE A   +  L++   K+N+     YT  + GLC+ G++  A  +  
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV---YTSLIDGLCKTGKIDAADELMQ 376

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            ++    +    S   LI GLC++  L  A  +    ++ G    P
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 190/424 (44%), Gaps = 26/424 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F VLI    K    E+A    G + +   + +  +Y ++++   +      A  +  +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +    +P+  ++S LI+GL +  K   A  ML++M ++GI  +  TYTI+I  L +   +
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +   ++F KM  +G +PD V Y   +  +C+  R+++A +++      G  P L +Y+ L
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR------------GLSEAGKVKDA 327
           I G        +A++ +  M  +  +P+   Y V++R             + +   +KD 
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL 558

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             LL D+ ER +      Y+  I+  C +  L++A+   + +   +  P+   +T +I  
Sbjct: 559 QVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            CR  ++ DA  L + M K+G  P +  +  +I  LC+ G    A  +F          L
Sbjct: 619 CCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVF--------GDL 670

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            L+ S      +D+   + ++      G + +   +L  + E G  P   T N++I G  
Sbjct: 671 LLKESN-----YDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITGEI 724

Query: 508 KVGN 511
            V N
Sbjct: 725 TVTN 728



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 141/298 (47%), Gaps = 13/298 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L++  G +   +  D++ +  ++     + V +  Y + G  E A     +M +
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P++  YN ++       L   A + +  MV     PN  ++++L+  + K   ++ 
Sbjct: 486 RGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDN 545

Query: 187 AIK------------MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++             +L+++T+R +      Y+  I  LC+++R +EA   F+ M+++  
Sbjct: 546 SVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANL 605

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           +P    Y ++++  C+L+ + +AL LL S  K G++P L SY  +I  L     +  A  
Sbjct: 606 TPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKE 665

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
            +  +  ++   D +++ ++I GL + G V +   LLS M+E G  P     NA+I G
Sbjct: 666 VFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN-TINAMITG 722


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 175/662 (26%), Positives = 292/662 (44%), Gaps = 78/662 (11%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLY-------WQTLDELRS 91
           +P     FF W A+R   R  A++ A +  LL     P  +D           T +++R 
Sbjct: 67  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMRE 126

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             V  +  +  V        GD  KA      M    C+ + Y Y  ++      +    
Sbjct: 127 A-VDAIQAIRRV-------GGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVRE 178

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL +   MV+  C  N+ T++LLI GL K G+   A ++L+EM  RG++P+ +TY  +I 
Sbjct: 179 ALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMID 238

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C+  R  +A  +   M+ +GC+PD   YN L+ G C   + DEA  LL      GF P
Sbjct: 239 GYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTP 297

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ +I+G  +A+R D+A      M     + D+  YGV+I  L +  + K+A + +
Sbjct: 298 TVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETV 357

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M   G+ P+   Y ++I G+C +G +  A  +   +      PN  T++ LI G+ ++
Sbjct: 358 SEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
             +  A  L  KM++ G  P V  +  LI G CK  E + A  LF  ME  G  P     
Sbjct: 418 QKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP----- 472

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D+ +   +    C +G   +AY  L++    G +   +TY SL++GF K G
Sbjct: 473 ---------DEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAG 520

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N + A  L +++  +G + DS TY  L+  L +  +  +A  I  QM  +G         
Sbjct: 521 NTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV-------- 572

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
                 C    +++  S  ++      G+ D +     E +  G   +A           
Sbjct: 573 -----KCNIVAYTIIISEMIK-----EGKHDHAKSMFNEMISSGHKPSA----------- 611

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLD 687
                  YT+++   C+ GQ++EA ++     E +     P  V     I+G    GY+D
Sbjct: 612 -----TTYTVFISSYCKIGQIEEAEHLIG---EMERDGVAPDVVTYNVFINGCGHMGYMD 663

Query: 688 LA 689
            A
Sbjct: 664 RA 665



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 262/607 (43%), Gaps = 69/607 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +I+GY K    + AL     M   +C+ D+  Y  ++N+  +K  F  A     EM
Sbjct: 301 TFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEM 360

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+V ++ +I+G  K GK   A+++   M   G  PN +TY+ +I GL Q  + 
Sbjct: 361 FANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKL 420

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  L  KM++ G +P  + Y  L+ G CK    D A  L    E++G  P   +Y+ L
Sbjct: 421 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 480

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
              L ++ R +EAY++   +  + +    V Y  ++ G S+AG    A  L+  M   G 
Sbjct: 481 THALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGC 537

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D+Y Y+ L++  C    L++A S+  ++       N   +TI+I  M + G  D A+ 
Sbjct: 538 KADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKS 597

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           +FN+M  +G  PS   +   I   CK G++E+A  L  +ME  G  P             
Sbjct: 598 MFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP------------- 644

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG-------- 510
            D  +    +      G + +A+  L ++ ++   P+  TY  L+  F K+         
Sbjct: 645 -DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVD 703

Query: 511 --------NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                    ++   +L + +   GL P +VTY ++I G  +  R E+A  +F  M     
Sbjct: 704 TSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDI 763

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           +P+  +Y  L+   C  + F  A S                                +  
Sbjct: 764 SPNEEIYTMLIKCCCDIKLFGKAVSF-------------------------------VTD 792

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH-GLC 681
           ++E  F+ +   L  Y   ++GLC +G   +A ++F  L+  +         K+++ GL 
Sbjct: 793 MIEFGFQPH---LESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLL 849

Query: 682 KRGYLDL 688
           K G++D 
Sbjct: 850 KAGHVDF 856



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 241/551 (43%), Gaps = 64/551 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I++L+K   F    +T+ E+ +  ++    ++  +I GY KVG    ALE F  M+   
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P+ + Y++++    + Q    A+A+  +M +    P ++T++ LI G  K  + + A 
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL--------------------- 227
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   +                     
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 519

Query: 228 -----------KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                      KM + GC  D   Y+ LL   CK ++++EAL++L      G    + +Y
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  + +  ++D A + + +M     +P    Y V I    + G++++A  L+ +M  
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI----------- 385
            G+ PD   YN  I G   +G +D+A S    +      PN  T+ IL+           
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDA 699

Query: 386 -----CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                 GM     +D   +L  +M K G  P+   ++++I G CKA  LE+A +LF  M 
Sbjct: 700 HYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMR 759

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                         G  +     + TM ++  C   L  KA   +  + E G  P + +Y
Sbjct: 760 --------------GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESY 805

Query: 500 NSLINGFCKVGNINGALKLFKE-LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           + LI G C  G+ + A  LF + L ++    + V +  L +GL +    +   ++   M 
Sbjct: 806 HYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAME 865

Query: 559 QNGCTPSPAVY 569
              C      Y
Sbjct: 866 NRHCQIDSETY 876



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 163/379 (43%), Gaps = 52/379 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+ K G+ + A     KM    C+ D Y Y+ +L    +++    AL++  +M
Sbjct: 508 TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  NIV ++++I+ + K GK + A  M +EM   G  P+  TYT+ IS  C+I + 
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 220 DEA------------------YRLFL-----------------KMKDSGCSPDFVAYNAL 244
           +EA                  Y +F+                 +M D+ C P++  Y  L
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687

Query: 245 LNGFCKLRRVDE----------------ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           L  F K+  VD                    LL    K G  P   +YS +I G  +A R
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +EA   +  M  + I P+  +Y ++I+   +      A+  ++DM E G  P    Y+ 
Sbjct: 748 LEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHY 807

Query: 349 LIKGFCDLGLLDQARSLQVEIWK-RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           LI G CD G  D+A+SL  ++    D   N   + IL  G+ + G VD   +L + ME  
Sbjct: 808 LIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENR 867

Query: 408 GCFPSVGMFNALIDGLCKA 426
            C      ++ + D + +A
Sbjct: 868 HCQIDSETYSMVTDNIHEA 886



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 156/358 (43%), Gaps = 19/358 (5%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N +++TILI G+C    V +A  L   M + GC  ++  +  LI GLCK G +  A  + 
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 437 YKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M + G  P+++              +   M++ YC +G +  A  I   +  +G  PD
Sbjct: 219 EEMPLRGVVPSVW--------------TYNAMIDGYCKSGRMKDALGIKALMERNGCNPD 264

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TYN LI G C     + A +L  +  ++G  P  +T+  +ING  + +R +DA R+  
Sbjct: 265 DWTYNILIYGLCG-EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKT 323

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKG 614
            M  + C      Y  L+    ++ +F  A     +   +    +     SI + + + G
Sbjct: 324 SMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVG 383

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +V  A++    M+ +        Y+  + GL QD ++ +A+ + + + E        +  
Sbjct: 384 KVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYT 443

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
            LI G CK+   D A  +F    +NG     +  N L  +L   K  +   AY  L R
Sbjct: 444 TLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL--CKSGRAEEAYSFLVR 499


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 232/481 (48%), Gaps = 34/481 (7%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLN--IAFRKQLFLLALAVYYEMVKLNCL-PNIV 169
           D   A+ SF +M   +  P +  +N +L   +      + +A+++Y+ + +LN + P+IV
Sbjct: 26  DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRL-QLNAITPSIV 84

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+ +IN     G+ + A  +L ++ + G  P+  T T +I GLC   +  EA      +
Sbjct: 85  TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G   + V+Y  L+NG CK+     AL +LR  +       +  YS +ID L + K  
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLV 204

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EAY  Y +M  +K+ PDVV +  +I G    G+ K+A  L  +M    I PD   +N L
Sbjct: 205 TEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNIL 264

Query: 350 IKGFCDLGLLDQARSL---------QVE--------IWKRDSLPNTHTFTILICGMCRNG 392
           +   C  G   + +++         QV         I KR   P+ H++TI+I  +C+  
Sbjct: 265 VDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIK 324

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
           MVD+A  LFN+M   G  P    +++LIDGLCK+  +  A  L  +M     P       
Sbjct: 325 MVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPA------ 378

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +  + +   C    + KA  ++ ++ + G  P+I TYN LI+G CK G  
Sbjct: 379 -------DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRF 431

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F++L +KG +    TY  +INGL      ++A  +  +M  NGCTP    Y+++
Sbjct: 432 ENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETI 491

Query: 573 M 573
           +
Sbjct: 492 I 492



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 219/475 (46%), Gaps = 36/475 (7%)

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
           P    LY +   +L +   S+V+  F  +I+ Y  +G+ + A     K+ +    PD   
Sbjct: 65  PIAISLYHRL--QLNAITPSIVT--FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTIT 120

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
              ++           AL  +  ++      N V++ +LINGL K G+T  A+++L ++ 
Sbjct: 121 LTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKID 180

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            + +  N   Y+ +I  LC+     EAY L+ +M     SPD V ++AL+ GFC + +  
Sbjct: 181 GKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFK 240

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE------------- 302
           EA  L          P + +++ L+D L +     E       M +E             
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300

Query: 303 ----KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
               ++ PDV  Y ++I+ L +   V +A+ L ++MR +GI PD   Y++LI G C    
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +  A  L  ++  R    +  T+T  +  +C+N  VD A  L  K++  G  P++  +N 
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420

Query: 419 LIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LIDGLCK G  E A ++F  + I G   T++              +   M+   C  GL 
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVW--------------TYNIMINGLCLEGLF 466

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            +A  +L ++ ++G  PD++TY ++I    K    + A KL +E+  +GL  + V
Sbjct: 467 DEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/574 (24%), Positives = 247/574 (43%), Gaps = 102/574 (17%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++ +Y M+++N  P+I+ F+ ++  L KS                    N   Y I IS
Sbjct: 30  AISSFYRMLRMNPSPSIIEFNKILGSLVKS--------------------NNNNYPIAIS 69

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                        L+ +++ +  +P  V +N ++N +C L  +D A ++L    K G+ P
Sbjct: 70  -------------LYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHP 116

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              + + LI GL    +  EA  ++  +       + V YG++I GL + G+ + A+++L
Sbjct: 117 DTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVL 176

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             +  + +  +   Y+ +I   C   L+ +A  L  ++  +   P+  TF+ LI G C  
Sbjct: 177 RKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMV 236

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G   +A  LF++M      P V  FN L+D LCK G  ++                    
Sbjct: 237 GQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKET------------------- 277

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                    K  L  M+++      ++KA  +   + +    PD+ +Y  +I   CK+  
Sbjct: 278 ---------KNVLAVMMKE---VNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKM 325

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ AL LF E++ KG+ PD VTY +LI+GL + +R   A+ +  QM   G       Y S
Sbjct: 326 VDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTS 385

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
            +   C+  +   A +L               +K I++           QG+        
Sbjct: 386 FLHALCKNHQVDKAVAL---------------VKKIKD-----------QGIQP------ 413

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
              +  Y I + GLC++G+ + A  IF  L+     VT  +   +I+GLC  G  D AM 
Sbjct: 414 --NINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMT 471

Query: 692 VFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKK 723
           +      NG    P V  Y  ++R+L  + +N K
Sbjct: 472 LLEKMEDNG--CTPDVVTYETIIRALFKNDENHK 503



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 195/450 (43%), Gaps = 40/450 (8%)

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGL--SEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +D   ++YR M      P ++ +  ++  L  S       A+ L   ++   I P    +
Sbjct: 28  HDAISSFYR-MLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N +I  +C LG +D A S+  +I K    P+T T T LI G+C NG V +A    + +  
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKAS 463
            G   +   +  LI+GLCK GE   A  +  K++   +  N  ++               
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMY--------------- 191

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++  C   L+ +AY++  Q+      PD++T+++LI GFC VG    A  LF E+ 
Sbjct: 192 -STIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMV 250

Query: 524 LKGLRPDSVTYGTLINGL-----------------QRVDREEDAFRIFGQMPQNGCTPSP 566
           L  + PD  T+  L++ L                 + V++   A  +F  + +   TP  
Sbjct: 251 LTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDV 310

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLE 625
             Y  ++   C+ +    A SL+ +        D  +  S+ + L K E + +A + L +
Sbjct: 311 HSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQ 370

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           M  +     +  YT +L  LC++ QV +A+ +   + +        +   LI GLCK G 
Sbjct: 371 MHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGR 430

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            + A  +F   L  G+ +     N ++  L
Sbjct: 431 FENAQVIFQDLLIKGYKVTVWTYNIMINGL 460



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 31/370 (8%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           V DA   F +M +    PS+  FN ++      G L K+N   Y + I    +L+ RL Q
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKIL------GSLVKSNNNNYPIAI----SLYHRL-Q 75

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +  T++  YC  G +  A+ +L ++ + G  PD IT  +LI G C  G ++
Sbjct: 76  LNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVH 135

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL     +  +G R + V+YG LINGL ++     A ++  ++       +  +Y +++
Sbjct: 136 EALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTII 195

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLND 632
              C+ +  + A+ L+ Q +      D  +  + I  F   G+ + A     EM     +
Sbjct: 196 DSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNIN 255

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVE---------------CKAIVTP--PSCVK 675
             +  + I +  LC++G  KE  N+ +V+++                K  VTP   S   
Sbjct: 256 PDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTI 315

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           +I  LCK   +D A+ +F      G        + L+  L   K  +  HA+ LL +M +
Sbjct: 316 IIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGL--CKSERISHAWELLDQMHA 373

Query: 736 VGYDLDACLY 745
            G   D   Y
Sbjct: 374 RGQPADVITY 383



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 3/239 (1%)

Query: 34  VTSVIMKTKNPQV--GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           V +V+MK  N QV      F    KR+      S + +I  L K    D      +E+R 
Sbjct: 280 VLAVMMKEVN-QVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRC 338

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             ++     +  LI G  K      A E   +M       DV  Y + L+   +      
Sbjct: 339 KGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDK 398

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A+  ++      PNI T+++LI+GL K G+ E A  +  ++  +G     +TY I+I+
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           GLC     DEA  L  KM+D+GC+PD V Y  ++    K     +A  LLR     G +
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLL 517



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++ +  L K +  D     + +++   +    + + +LI G  K G  E A   F  +  
Sbjct: 384 TSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLI 443

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +  V+ YN ++N    + LF  A+ +  +M    C P++VT+  +I  L K+ +   
Sbjct: 444 KGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHK 503

Query: 187 AIKMLDEMTQRGILPNK 203
           A K+L EM  RG+L  K
Sbjct: 504 AEKLLREMIARGLLEEK 520


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 221/428 (51%), Gaps = 14/428 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL ++ EMV+   LP++V F+ L+  ++   + E  I    +M   GI  + +++TI+I 
Sbjct: 49  ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+ +R   A  +  KM   G  P  V + +LL+GFC   R+ +A +L+ S  K G+ P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            +  Y+ LID L +    + A     +M ++ ++  D+V Y  ++ GL  +G+ + A ++
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L DM +R I PD + + ALI  F   G LD+A+ L  ++ +    PNT T+  LI G+C 
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCM 288

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           +G +  A+K F+ M   GCFP+V  +N LI+G CK+  +E    LF +M           
Sbjct: 289 HGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM----------- 337

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
             +G   V D  +  T++  YC  G +  A  I   +   G  PDIIT+  L++G C  G
Sbjct: 338 YREG--LVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  A+  F +++        V Y  +I+GL + D+ E+A+ +F ++P  G  P    Y 
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455

Query: 571 SLMTWSCR 578
            ++   C+
Sbjct: 456 IMILGLCK 463



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 213/431 (49%), Gaps = 48/431 (11%)

Query: 183  KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
            K + A  +  EM Q   +P+   +T V++ + ++N+ D    LF KM++ G S D  ++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 243  ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
             L++ FC+  R   ALALL    K GF P + +   L++G  +  R+ EA +    M E 
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 303  KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG----- 357
             +EP+VV+Y  +I GL +   + +A+++   M ++GIV D   YN LI G C+ G     
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 358  ---------------------LLD---------QARSLQVEIWKRDSLPNTHTFTILICG 387
                                 L+D         +A++L  E+ +R   PN  T+  LI G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             C  G + DA+ +F+ M   GCFP V  +N LI G CK+  +E    LF +M        
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT------- 887

Query: 448  FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                 QG   V D  +  T++  YC AG ++ A K+  ++ + G  PDI+TYN L++  C
Sbjct: 888  ----HQG--LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLC 941

Query: 508  KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
              G I  AL + ++LQ   +  D +TY  +I G+ R D+ ++A+ +F  + + G      
Sbjct: 942  NNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAI 1001

Query: 568  VYKSLMTWSCR 578
             Y ++++  CR
Sbjct: 1002 AYITMISGLCR 1012



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 244/536 (45%), Gaps = 42/536 (7%)

Query: 16   TPIEPALEPLLPFLSKTTVTSVIMKT-------KNPQVGFRFFIWAAK----------RK 58
            T +  +L  L+P  S ++V   + +         NP+   R F  A+           R+
Sbjct: 528  TTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPES--RSFSGASHHHHHHHHHHYRE 585

Query: 59   RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            RLRS       +  +   + F L+ + L   +S  +  + D F  +++   K+   +  +
Sbjct: 586  RLRS------ELHCIKFDDAFGLFCEML---QSRPIPSIVD-FTRVLTAIAKMNKFDIVI 635

Query: 119  ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
              F KM+      D+Y +  +++   R   F LALA+  +M+KL   P+IVT   L+NG 
Sbjct: 636  YLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGF 695

Query: 179  SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
             +  + + A+ ++D M + G+ PN   Y  VI+GLC+    + A  +F  M+  G   D 
Sbjct: 696  CQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADA 755

Query: 239  VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            V YN L++G C   R  +A  LLR   K    P +  ++ LID   +     EA   Y++
Sbjct: 756  VTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKE 815

Query: 299  MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
            M    + P+++ Y  +I G    G++ DA  +   M  +G  PD   YN LI GFC    
Sbjct: 816  MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875

Query: 359  LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            ++    L  E+  +  + +  T+  LI G C+ G ++ AQK+FN+M   G  P +  +N 
Sbjct: 876  VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935

Query: 419  LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
            L+D LC  G++EKA ++   ++  +                D  +   +++  C    + 
Sbjct: 936  LLDCLCNNGKIEKALVMVEDLQKNQMDV-------------DIITYNIIIQGMCRNDKVK 982

Query: 479  KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
            +A+ +   L   G   D I Y ++I+G C+ G    A KL   ++  G  P    Y
Sbjct: 983  EAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 209/449 (46%), Gaps = 16/449 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E AL+ F +M +    P V  +  +L      + +   +    +M       ++ +F++L
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+   +  +  +A+ +L +M + G  P+  T+  ++ G C  NR  +A+ L   M  SG 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAY 293
            P+ V YN L++  CK   V+ AL LL   EK G     L +Y+ L+ GL  +  + +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              R M + +I PDV  +  +I    + G + +A +L   M +  I P+T  YN+LI G 
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  G L  A+     +  +   PN  T+  LI G C++  V+D  KLF +M + G     
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 414 GMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N LI G C+ G+L  A  +F + +  G  P              D  +   ++   C
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP--------------DIITHCILLHGLC 392

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G I  A      +        I+ YN +I+G CK   +  A +LF  L ++G++PD+ 
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDAR 452

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           TY  +I GL +     +A  +F +M ++G
Sbjct: 453 TYTIMILGLCKNGPRREADELFRRMKEDG 481



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 173/667 (25%), Positives = 292/667 (43%), Gaps = 56/667 (8%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  + +      AL   GKM +    P +  + ++L+    +     A ++   MV
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF-TYTIVISGLCQINRA 219
           K    PN+V ++ LI+ L K+G   +A+++L+EM ++G L     TY  +++GLC     
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A R+   M     +PD   + AL++ F K   +DEA  L +   +    P   +Y+ L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL    R   A   +  M  +   P+VV Y  +I G  ++ +V+D MKL   M   G+
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           V DT+ YN LI G+C +G L  A+ +   +      P+  T  IL+ G+C NG +  A  
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLS 452
            FN M     +  +  +N +I GLCKA ++E+A  LF ++ + G  P       + L L 
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462

Query: 453 QGGNRVHDKASLQTMVEQ--YCTA----------------GLIHKAYKILMQLAESGNL- 493
           + G R       + M E    C A                G I    K    + ESG+L 
Sbjct: 463 KNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLY 522

Query: 494 ---PDIITYNSLIN--GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL------- 541
               D   ++SL+         ++ G ++    L  +G  P+S ++    +         
Sbjct: 523 YYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHH 582

Query: 542 --QRVDRE------EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
             +R+  E      +DAF +F +M Q+   PS   +  ++T   +  KF +   L+ +  
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI--WLIGLCQDGQV 651
                 D  S   +     +    +    LL    KL  FQ +  T+   L G CQ  + 
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG-FQPSIVTLGSLLNGFCQGNRF 701

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           +EA+++   + E   +   P+ V    +I+GLCK   L+ A+++F    K G +      
Sbjct: 702 QEAVSLVDSMAE---LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758

Query: 709 NYLLRSL 715
           N L+  L
Sbjct: 759 NTLISGL 765



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 223/511 (43%), Gaps = 51/511 (9%)

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            D+A+ LF +M  S   P  V +  +L    K+ + D  + L    E  G    L S++ L
Sbjct: 597  DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I    R  R+  A A   KM +   +P +V  G ++ G  +  + ++A+ L+  M E G+
Sbjct: 657  IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P+   YN +I G C    L+ A  +   + K+  + +  T+  LI G+C +G   DA +
Sbjct: 717  EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            L   M K    P+V  F ALID   K G L +A  L+ +M         +R S     VH
Sbjct: 777  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM---------IRRS-----VH 822

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                              P+I+TYNSLINGFC  G +  A  +F
Sbjct: 823  ----------------------------------PNILTYNSLINGFCIQGRLGDAKHMF 848

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
              +  KG  PD VTY TLI G  +  R ED  ++F +M   G       Y +L+   C+ 
Sbjct: 849  DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQA 908

Query: 580  RKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K ++A  ++   + D     D    +I  +     G++E A+  + ++     D  +  
Sbjct: 909  GKLNVAQKVF-NRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 638  YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
            Y I + G+C++ +VKEA  +F  L      +   + + +I GLC+ G    A  +     
Sbjct: 968  YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 698  KNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
            ++GF+   R+ +  LR    S   + + A H
Sbjct: 1028 EDGFMPSERIYDETLRDHYTSLSAELIKAVH 1058



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 172/731 (23%), Positives = 298/731 (40%), Gaps = 89/731 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           V+  LI    K GD   ALE   +M K+     D+  YN +L        +  A  +  +
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M K    P++ TF+ LI+   K G  + A ++  +M Q  I PN  TY  +I+GLC   R
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A + F  M   GC P+ V YN L+NGFCK RRV++ + L +   ++G V    +Y+ 
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI G  +  +   A   +  M    + PD++ + +++ GL   G++  AM   +DMR   
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
                  YN +I G C    +++A  L   +      P+  T+TI+I G+C+NG   +A 
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 471

Query: 399 KLFNKMEKAGCFPSV--------GMFNALIDG---LC---KAGELEKANLLFYKME---- 440
           +LF +M++ G             G  N +  G   +C   +   +E  +L +Y  +    
Sbjct: 472 ELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLW 531

Query: 441 ---IGKNPTL-------FLR-----LSQGGN---RVHDKASLQTMV------------EQ 470
              +G  P         F+R     L +G N   R    AS                 E 
Sbjct: 532 SSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSEL 591

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL--- 527
           +C       A+ +  ++ +S  +P I+ +  ++    K+   +  + LF +++  G+   
Sbjct: 592 HCIK--FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHD 649

Query: 528 --------------------------------RPDSVTYGTLINGLQRVDREEDAFRIFG 555
                                           +P  VT G+L+NG  + +R ++A  +  
Sbjct: 650 LYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG 614
            M + G  P+  +Y +++   C+ R  + A  ++    +     D  +  + I      G
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
              +A + L +M  +  D  +  +T  +    ++G + EA N++  ++         +  
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            LI+G C +G L  A  +F   +  G    P V  Y      F K  +      L C M 
Sbjct: 830 SLINGFCIQGRLGDAKHMFDLMVSKGCF--PDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 735 SVGYDLDACLY 745
             G   DA  Y
Sbjct: 888 HQGLVGDAFTY 898



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 13/454 (2%)

Query: 47   GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
             F  F    + + + S    + V++ + K N FD+      ++ +  +S     F +LI 
Sbjct: 599  AFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIH 658

Query: 107  GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
             + +      AL   GKM +   QP +    ++LN   +   F  A+++   M +L   P
Sbjct: 659  CFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEP 718

Query: 167  NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
            N+V ++ +INGL K+     A+++   M ++GI+ +  TY  +ISGLC   R  +A RL 
Sbjct: 719  NVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLL 778

Query: 227  LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
              M      P+ + + AL++ F K   + EA  L +   +    P + +Y+ LI+G    
Sbjct: 779  RDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQ 838

Query: 287  KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
             R  +A   +  M  +   PDVV Y  +I G  ++ +V+D MKL  +M  +G+V D + Y
Sbjct: 839  GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY 898

Query: 347  NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            N LI G+C  G L+ A+ +   +      P+  T+ IL+  +C NG ++ A  +   ++K
Sbjct: 899  NTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 958

Query: 407  AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                  +  +N +I G+C+  ++++A              LF  L++ G ++ D  +  T
Sbjct: 959  NQMDVDIITYNIIIQGMCRNDKVKEA------------WCLFRSLTRKGVKL-DAIAYIT 1005

Query: 467  MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            M+   C  GL  +A K+  ++ E G +P    Y+
Sbjct: 1006 MISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 14/406 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M+ F    D+Y +  +++   R     LAL++  +M+KL   P+IVTF  L++G     
Sbjct: 90  QMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRN 149

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAY 241
           +   A  ++  M + G  PN   Y  +I  LC+    + A  L  +M+  G  + D V Y
Sbjct: 150 RIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTY 209

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N LL G C      +A  +LR   K    P + +++ LID   +    DEA   Y++M +
Sbjct: 210 NTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQ 269

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I P+ V Y  +I GL   G++  A K    M  +G  P+   YN LI GFC    ++ 
Sbjct: 270 SSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVED 329

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
              L   +++   + +T T+  LI G C+ G +  A+ +F+ M   G  P +     L+ 
Sbjct: 330 GMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLH 389

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           GLC  GE+  A + F  M             + G +     +   M+   C A  + +A+
Sbjct: 390 GLCVNGEIGSAMVKFNDM-------------RSGEKYLGIVAYNIMIHGLCKADKVEEAW 436

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  +L   G  PD  TY  +I G CK G    A +LF+ ++  G+
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 206/467 (44%), Gaps = 54/467 (11%)

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G   + R+++A   + +M + +  P VV +  ++  ++   + +  +     M   GI  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D Y +  LI  FC    L  A S+  ++ K    P+  TF  L+ G C    + DA  L 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
             M K+G  P+V ++N LID LCK G++  A  L  +ME            + G    D 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME------------KKGRLAADL 206

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++   C +G   +A +IL  + +    PD+ T+ +LI+ F K GN++ A +L+K+
Sbjct: 207 VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQ 266

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +    + P++VTY +LINGL    R   A + F  M   GC P+   Y +L+   C+ R 
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSR- 325

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
                            R ++ MK  +   ++G V +                   Y   
Sbjct: 326 -----------------RVEDGMKLFQRMYREGLVGDTF----------------TYNTL 352

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           + G CQ G+++ A +IFS +V C   VTP     C+ L+HGLC  G +  AM  F     
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCG--VTPDIITHCI-LLHGLCVNGEIGSAMVKFNDMRS 409

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               L     N ++  L   K +K   A+ L CR+   G   DA  Y
Sbjct: 410 GEKYLGIVAYNIMIHGL--CKADKVEEAWELFCRLPVEGVKPDARTY 454



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 12/371 (3%)

Query: 1    ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
            + +   E ++++D++   E  LEP +   +  TV + + K ++       F    K+  +
Sbjct: 697  QGNRFQEAVSLVDSMA--ELGLEPNVVIYN--TVINGLCKNRDLNNALEIFYGMEKKGIV 752

Query: 61   RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
                + + +IS L     +    + L ++    +      F  LI  + K G+  +A   
Sbjct: 753  ADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNL 812

Query: 121  FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            + +M      P++  YN+++N    +     A  ++  MV   C P++VT++ LI G  K
Sbjct: 813  YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCK 872

Query: 181  SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            S + E  +K+  EMT +G++ + FTY  +I G CQ  + + A ++F +M D G  PD V 
Sbjct: 873  SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932

Query: 241  YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
            YN LL+  C   ++++AL ++   +K+     + +Y+ +I G+ R  +  EA+  +R + 
Sbjct: 933  YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992

Query: 301  EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
             + ++ D + Y  MI GL   G  ++A KL + M+E G +P    Y        D  L D
Sbjct: 993  RKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY--------DETLRD 1044

Query: 361  QARSLQVEIWK 371
               SL  E+ K
Sbjct: 1045 HYTSLSAELIK 1055


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 223/441 (50%), Gaps = 21/441 (4%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           IS  +   D + A+  F  +   +     + +N +L    + + +   L++  +M     
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            PN VTF++LIN   + G    A  +L ++ + G  P+  T    I G C   +  +A  
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS--YSCLIDG 282
              K+   G   D V+Y  L+NG CK+     AL LLR    DG + +L +  Y+ +IDG
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV--DGKLVQLNAVMYNTVIDG 217

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           + + K  ++A+  Y +M  ++I PDVV Y  +IRG    GK+KDA+ L + M    I PD
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y +N L+ GFC  G L +A+++   +  +D  PN  TF  L+ G C++  + + + +F 
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG--NRVHD 460
            M K G  P+V  + +L+DG C   ++ KA  +F  M            SQ G    VH 
Sbjct: 338 MMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTM------------SQRGVTANVH- 384

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             S   M+  +C    + KA K+ +++     +PD++TYNSLI+G CK G I+ A +L  
Sbjct: 385 --SYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVN 442

Query: 521 ELQLKGLRPDSVTYGTLINGL 541
           E+  +G  P+ +TY +++N L
Sbjct: 443 EMHDRGQPPNIITYNSILNAL 463



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 216/436 (49%), Gaps = 26/436 (5%)

Query: 120 SFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           S  +  EF+   P+   +N ++N   +  L   A +V  +++K+   P+I+T +  I G 
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
              G+   A+   D++   G   ++ +Y  +I+GLC++     A +L  ++       + 
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN +++G  K + V++A  L          P + +YS LI G F   +  +A   + K
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  E I+PDV  + +++ G  + G++K A  +L  M  + I P+   +N L+ GFC    
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRK 328

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           + + +++   + K+   PN  T+  L+ G C    V+ A+K+FN M + G   +V  +N 
Sbjct: 329 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 388

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +I+G CK  +++KA  LF +M                + + D  +  ++++  C +G I 
Sbjct: 389 MINGFCKIKKVDKAMKLFIEM-------------HHKHIIPDVVTYNSLIDGLCKSGKIS 435

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A++++ ++ + G  P+IITYNS++N             L  +L+ +G++P+  T   LI
Sbjct: 436 YAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILI 483

Query: 539 NGLQRVDREEDAFRIF 554
            GL +  + E A ++F
Sbjct: 484 KGLCQSGKLEAARKVF 499



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 222/490 (45%), Gaps = 40/490 (8%)

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           S   + A+ + + +  +      F +  ++  L +         L  +M+  G +P+FV 
Sbjct: 46  SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVT 105

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           +N L+N FC+L  +  A ++L    K G+ P + + +  I G     +  +A  ++ K+ 
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
                 D V YG +I GL + G+ + A++LL  +  + +  +   YN +I G      ++
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A  L  E+  +   P+  T++ LI G    G + DA  LFNKM      P V  FN L+
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 421 DGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           DG CK G L+KA N+L   M     P +              ++  T+V+ +C    + +
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNV--------------STFNTLVDGFCKDRKMKE 331

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              +   + + G  P+++TY SL++G+C V  +N A K+F  +  +G+  +  +Y  +IN
Sbjct: 332 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMIN 391

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  ++ + + A ++F +M      P    Y SL+   C+  K S AF L           
Sbjct: 392 GFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQL----------- 440

Query: 600 DDESMKSIEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPY----TIWLIGLCQDGQVK 652
                  + E   +G+  N I     L  +  KL D  + P     TI + GLCQ G+++
Sbjct: 441 -------VNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLE 493

Query: 653 EALNIFSVLV 662
            A  +F  L+
Sbjct: 494 AARKVFEDLL 503



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 209/425 (49%), Gaps = 25/425 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI+ + ++G    A     K+ +   +PD+   N  +     K     AL  + ++V
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            L    + V++  LINGL K G+T  A+++L  +  + +  N   Y  VI G+ +    +
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ L+ +M     SPD V Y+AL+ GF  + ++ +A+ L      +   P + +++ L+
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG  +  R  +A      M  + I+P+V  +  ++ G  +  K+K+   + + M ++GI 
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y +L+ G+C +  +++A+ +   + +R    N H++ I+I G C+   VD A KL
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M      P V  +N+LIDGLCK+G++  A                    Q  N +HD
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYA-------------------FQLVNEMHD 446

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           +     ++    T   I  A  +L +L + G  P++ T   LI G C+ G +  A K+F+
Sbjct: 447 RGQPPNII----TYNSILNA--LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500

Query: 521 ELQLK 525
           +L +K
Sbjct: 501 DLLVK 505



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 187/475 (39%), Gaps = 60/475 (12%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           +  F+P    YS  I   F +   D A + +  +  +        +  ++  L ++    
Sbjct: 31  QKNFIP----YSS-ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYH 85

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
             + L   M   GI P+   +N LI  FC LGL+  A S+  +I K    P+  T    I
Sbjct: 86  TVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFI 145

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G C  G +  A    +K+   G       +  LI+GLCK GE   A  L  +++     
Sbjct: 146 KGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVD----- 200

Query: 446 TLFLRLSQGGNRVHDKASL-QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                    G  V   A +  T+++       ++ A+ +  ++      PD++TY++LI 
Sbjct: 201 ---------GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIR 251

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GF  VG +  A+ LF ++ L+ ++PD  T+  L++G  +  R + A  +   M      P
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           + + + +L+   C+ RK                    E        +++G   N +    
Sbjct: 312 NVSTFNTLVDGFCKDRKMK------------------EGKTVFAMMMKQGIKPNVV---- 349

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        Y   + G C   QV +A  IF+ + +        S   +I+G CK  
Sbjct: 350 ------------TYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIK 397

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRMKSVG 737
            +D AM +F+       I  P V  Y   SL+    K  K  +A+ L+  M   G
Sbjct: 398 KVDKAMKLFIEMHHKHII--PDVVTY--NSLIDGLCKSGKISYAFQLVNEMHDRG 448


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 163/679 (24%), Positives = 305/679 (44%), Gaps = 28/679 (4%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F++ + +I      N  D+      +++         +F  LI G+ K G  + AL   
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK      D+ +YN  ++   +     +A   ++E+      P+ VT++ +I  L K+
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + + A++M + + +   +P  + Y  +I G     + DEAY L  + +  G  P  +AY
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N +L    K+ +VDEAL +    +KD   P L +Y+ LID L RA + D A+     M +
Sbjct: 347 NCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQK 405

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + P+V    +M+  L ++ K+ +A  +   M  +   PD   + +LI G   +G +D 
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDD 465

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +  ++   D   N+  +T LI     +G  +D  K++  M    C P + + N  +D
Sbjct: 466 AYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMD 525

Query: 422 GLCKAGELEKANLLFYKMEIGK---------------------NPT--LFLRLSQGGNRV 458
            + KAGE EK   +F +++  +                     N T  LF  + + G  V
Sbjct: 526 CMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC-V 584

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++ +C  G ++KAY++L ++   G  P ++TY S+I+G  K+  ++ A  L
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+E + K +  + V Y +LI+G  +V R ++A+ I  ++ Q G TP+   + SL+    +
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVK 704

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             + + A  +  Q ++++    ++      I    +  +   A     EM  +       
Sbjct: 705 AEEINEAL-VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            YT  + GL + G + EA  +F        +        +I GL        A  +F  T
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823

Query: 697 LKNGFILRPRVCNYLLRSL 715
            + G  +  + C  LL +L
Sbjct: 824 RRRGLHIHNKTCVVLLDTL 842



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 151/655 (23%), Positives = 286/655 (43%), Gaps = 61/655 (9%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           GN  +V+D+  VL +G +     E AL +      F  QP+      V+ +  R +    
Sbjct: 31  GNRQIVNDICNVLETGAWGPS-AENALSALN----FKPQPEF-----VIGVLRRLKDVNR 80

Query: 152 ALAVYYEMVKLNCLPNI-VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           A+  +    +   LP+   +++ L+  +++    +   ++L EM+  G  P+  T   ++
Sbjct: 81  AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMV 140

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
               + N+  E + +   M+     P F AY  L+  F  +   D  L L +  ++ G+ 
Sbjct: 141 LSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE 200

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P +  ++ LI G  +  R D A +   +M    ++ D+VLY V I    + GKV  A K 
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             ++   G+ PD   Y ++I   C    LD+A  +   + K   +P T+ +  +I G   
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G  D+A  L  +    G  PSV  +N ++  L K G++++A  +F +M+    P L   
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNL--- 377

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                      ++   +++  C AG +  A+++   + ++G  P++ T N +++  CK  
Sbjct: 378 -----------STYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A  +F+++  K   PD +T+ +LI+GL +V R +DA++I+ +M  + C  +  VY 
Sbjct: 427 KLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYT 486

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           SL                                  I+ F   G  E+  +   +M  + 
Sbjct: 487 SL----------------------------------IKNFFNHGRKEDGHKIYKDMVNQN 512

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               L     ++  + + G+ ++   +F  +   + +    S   LIHGL K G+ +   
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETY 572

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++F    + G +L  R  N ++    F K  K   AY LL  MK+ G++     Y
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDG--FCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 259/592 (43%), Gaps = 62/592 (10%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T++  V+ K          F    K +R+    + + +I        FD  +  L+ 
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333

Query: 89  LRS-GNV-SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
            R+ G++ SV++  +  +++   K+G  ++AL  F +MK+ D  P++  YN ++++  R 
Sbjct: 334 QRAKGSIPSVIA--YNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILIDMLCRA 390

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +   M K    PN+ T +++++ L KS K + A  + ++M  +   P++ T+
Sbjct: 391 GKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITF 450

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL-------- 258
             +I GL ++ R D+AY+++ KM DS C  + + Y +L+  F    R ++          
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVN 510

Query: 259 ---------------------------ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
                                      A+    +   FVP   SYS LI GL +A   +E
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANE 570

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
            Y  +  M E+    D   Y ++I G  + GKV  A +LL +M+ +G  P    Y ++I 
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G   +  LD+A  L  E   +    N   ++ LI G  + G +D+A  +  ++ + G  P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT---------------------LFL 449
           +V  +N+L+D L KA E+ +A + F  M E+   P                      +F 
Sbjct: 691 NVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           +  Q         S  TM+     AG I +A  +  +   +G +PD   YN++I G    
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
                A  LF+E + +GL   + T   L++ L + D  E A  +   + + G
Sbjct: 811 NRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 279/612 (45%), Gaps = 27/612 (4%)

Query: 97   VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            +  VF +LI  Y K G  + A+E+F  +     +P VY  N +L    + +   L  +++
Sbjct: 913  IPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLF 972

Query: 157  YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
             EM      PN+ TF++LINGL   G  + A  +L +M + G +P   TY  +++  C+ 
Sbjct: 973  REMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKK 1032

Query: 217  NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             R   A  L   M   G   D   YN  ++  C   R  +A  LL+   K+   P   +Y
Sbjct: 1033 GRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTY 1092

Query: 277  SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
            + LI+G  +  +   A   + +M +  + P+ V Y  +I G    G  ++A++LL  M  
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 1152

Query: 337  RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             G+  +   Y  L+ G C     + A+ L   +   D +     +T+LI G+C+NGM+D+
Sbjct: 1153 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 1212

Query: 397  AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
            A +L   M K G  P V  +++LI+G C+ G ++ A              +  R+ + G 
Sbjct: 1213 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAK------------EIICRMYRSG- 1259

Query: 457  RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
             V +K    T++  +C  G + +A K+   +  +G+  D  T N L++  C+ G +  A 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 517  KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            K    +   GL P+S+TY  +ING   +    +AF  F  M + G  PS   Y SL+   
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 577  CRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+      A   +L  L  I G  D  M +  + E  + G +  A+  L +   K+    
Sbjct: 1380 CKGGNLVEA-KKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAV-ALFD---KMVQNN 1434

Query: 635  LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDL 688
            + P    Y+  L GLC+ G+   A+ +F   +  +  + P   +   L+ GL K G+   
Sbjct: 1435 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG-RGTLFPNHVMYTCLVDGLSKAGHPKA 1493

Query: 689  AMDVFLYTLKNG 700
            A   F   +K G
Sbjct: 1494 AFYFFEEMMKKG 1505



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 173/707 (24%), Positives = 305/707 (43%), Gaps = 54/707 (7%)

Query: 69   VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
            +++ ++K    +L W    E+    +      F +LI+G    G+ +KA     +M+E  
Sbjct: 955  ILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENG 1014

Query: 129  CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
              P +  YN +LN   +K  +  A+ +   M+      ++ T+++ I+ L  + ++  A 
Sbjct: 1015 FVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAY 1074

Query: 189  KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
             +L +M +  I PN+ TY  +I+G  +  +   A ++F +M     SP+ V YNAL+ G 
Sbjct: 1075 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 1134

Query: 249  CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            C +   +EAL LL   E  G      +Y  L++GL + ++++ A     +M    +    
Sbjct: 1135 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGH 1194

Query: 309  VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            + Y V+I GL + G + +A++L+ +M + G+ PD   Y++LI GFC +G +  A+ +   
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254

Query: 369  IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
            +++   + N   ++ LI   C++G V +A K++  M   G        N L+  LC+ G+
Sbjct: 1255 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 1314

Query: 429  L-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            L E    L +   IG  P              +  +   ++  Y + G    A+     +
Sbjct: 1315 LGEAEKFLCHMSRIGLVP--------------NSITYDCIINGYGSIGDPLNAFSFFDDM 1360

Query: 488  AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             + G  P   TY SL+ G CK GN+  A K    L       DSV Y TL+    +    
Sbjct: 1361 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 1420

Query: 548  EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR------------- 594
             +A  +F +M QN   P    Y SL+T  CR+ K   A  L+   +              
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480

Query: 595  -----DISGRDDESMKSIEEFLQKGEVENAIQGLLEMD--------FKLNDF-------- 633
                   +G    +    EE ++KG   + +     +D         K NDF        
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540

Query: 634  ---QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                LA Y I L G  +   +   L+++S ++         +   LI GL K G  DL +
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600

Query: 691  DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
             +    +  G +      N L+    +S+  K   A+ L+  M ++G
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINK--YSESGKMRKAFDLVNFMNTLG 1645



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 184/753 (24%), Positives = 296/753 (39%), Gaps = 129/753 (17%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            L ++R   +S     +  LI+G+ K G    A + F +M +FD  P+   YNA++     
Sbjct: 1077 LKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCH 1136

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
               F  AL +   M       N VT+  L+NGL K  K E+A ++L+ M    ++     
Sbjct: 1137 VGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIA 1196

Query: 206  YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            YT++I GLC+    DEA +L   M   G +PD + Y++L+NGFC++  +  A  ++    
Sbjct: 1197 YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMY 1256

Query: 266  KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            + G V     YS LI    +     EA   Y  M       D     V++  L   GK+ 
Sbjct: 1257 RSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 1316

Query: 326  DAMKLLSDMRERGIVPDT-----------------------------------YCYNALI 350
            +A K L  M   G+VP++                                   + Y +L+
Sbjct: 1317 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 1376

Query: 351  KGFCDLGLLDQAR-------------------SLQVEIWK----------------RDSL 375
            KG C  G L +A+                   +L  E  K                 + L
Sbjct: 1377 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 1436

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLF-NKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P+++T++ L+ G+CR G    A  LF   M +   FP+  M+  L+DGL KAG   KA  
Sbjct: 1437 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH-PKAAF 1495

Query: 435  LFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             F++  M+ G  P              D  +   +++     G + KA      +   G 
Sbjct: 1496 YFFEEMMKKGTCP--------------DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 1541

Query: 493  LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             P++ TYN L++GF K   +   L L+  +  +G+ PD +T+ +LI GL +    +   +
Sbjct: 1542 CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 1601

Query: 553  IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL--WLQYLRDISGRDD--------- 601
            + G+M   G       +  L+       K   AF L  ++  L     RD          
Sbjct: 1602 LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 1661

Query: 602  ------ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                  ES   + E L+ G +    Q                Y   + G+C+ G ++ A 
Sbjct: 1662 KKSAFRESTVVLHEMLENGVIPKHAQ----------------YITLINGMCRVGDIQGA- 1704

Query: 656  NIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
              F +  E +A+      V    ++ GL   G  + AM V  + L+    L P +  +  
Sbjct: 1705 --FKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLR--MRLLPTIATFTT 1760

Query: 713  RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                F +D K   A  L   M+  G  LD   Y
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAY 1793



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 240/520 (46%), Gaps = 14/520 (2%)

Query: 43   NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
            +P   F FF    K  +  SF +  +++  L K        + L+ L     +V S ++ 
Sbjct: 1349 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYN 1408

Query: 103  VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY-YEMVK 161
             L++   K G+  +A+  F KM + +  PD Y Y+++L    RK   + A+ ++   M +
Sbjct: 1409 TLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGR 1468

Query: 162  LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
                PN V ++ L++GLSK+G  + A    +EM ++G  P+   +  +I    +  +  +
Sbjct: 1469 GTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMK 1528

Query: 222  AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            A   F  M+  G  P+   YN LL+GF K + +   L+L  +  ++G  P   ++  LI 
Sbjct: 1529 ANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 1588

Query: 282  GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            GL ++   D       KM  E    D   + ++I   SE+GK++ A  L++ M   G+ P
Sbjct: 1589 GLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFP 1648

Query: 342  DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
            D   YN +  G        ++  +  E+ +   +P    +  LI GMCR G +  A KL 
Sbjct: 1649 DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 1708

Query: 402  NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            ++ME  G        +A++ GL   G+ E A L+   M       L +RL      +   
Sbjct: 1709 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHM-------LRMRL------LPTI 1755

Query: 462  ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            A+  T++ ++C    I +A K+   +   G   D++ YN LI G C  G+   A +L++E
Sbjct: 1756 ATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEE 1815

Query: 522  LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            ++ + L P+  TY  L++ +   +      ++   + + G
Sbjct: 1816 MRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 215/471 (45%), Gaps = 14/471 (2%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            L+ G  K G+  +A +   ++       D  +YN +L    +      A+A++ +MV+ N
Sbjct: 1375 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEA 222
             LP+  T+S L+ GL + GK   A+ +      RG L PN   YT ++ GL +      A
Sbjct: 1435 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 1494

Query: 223  YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +  F +M   G  PD VA+NA+++   +  ++ +A     +    G  P L +Y+ L+ G
Sbjct: 1495 FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 1554

Query: 283  LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              + +      + Y  M  E I PD + +  +I GLS++G     +KLL  M   G + D
Sbjct: 1555 FSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLAD 1614

Query: 343  TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
             + +N LI  + + G + +A  L   +      P+  T+  +  G+ +     ++  + +
Sbjct: 1615 QFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLH 1674

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +M + G  P    +  LI+G+C+ G+++ A  L  +ME          L  G + V + A
Sbjct: 1675 EMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEME---------ALGFGSHEVAESA 1725

Query: 463  SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                MV      G    A  +L  +     LP I T+ +L++ FC+   I  ALKL   +
Sbjct: 1726 ----MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1781

Query: 523  QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +L GL+ D V Y  LI G+        AF ++ +M      P+   Y  L+
Sbjct: 1782 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 1832



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F +LI+ Y + G   KA +    M      PD   YN + N   +K  F  +  V +EM
Sbjct: 1617 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++   +P    +  LING+ + G  + A K+ DEM   G   ++   + ++ GL    + 
Sbjct: 1677 LENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT 1736

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            ++A  +   M      P    +  L++ FC+  ++ EAL L    E  G    + +Y+ L
Sbjct: 1737 EDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVL 1796

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I G+        A+  Y +M    + P++  Y V++  +S A  +    KLL+D++ERG+
Sbjct: 1797 IMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856

Query: 340  V 340
            +
Sbjct: 1857 I 1857



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 83/201 (41%)

Query: 75   KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
            K + F      L E+    V      +  LI+G  +VGD + A +   +M+         
Sbjct: 1662 KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 1721

Query: 135  IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
              +A++           A+ V   M+++  LP I TF+ L++   +  K   A+K+   M
Sbjct: 1722 AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1781

Query: 195  TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
               G+  +   Y ++I G+C    +  A+ L+ +M+     P+   Y  L++       +
Sbjct: 1782 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1841

Query: 255  DEALALLRSFEKDGFVPRLGS 275
             +   LL   ++ G +   GS
Sbjct: 1842 IQGEKLLTDLQERGLISWGGS 1862


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 241/488 (49%), Gaps = 20/488 (4%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNI 142
           Q L +++  N   +   F ++   Y K    +KAL+ F +M  EF C+  V  +N VLN+
Sbjct: 86  QLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNV 145

Query: 143 AFRKQLFLLALAVYYEMVKLNCL----PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
             ++  F LAL  Y  ++  N      PN ++F+L+I  L + G  + A+++   M+ R 
Sbjct: 146 VIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRN 205

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
            + + +TY+ ++ GLC   R DEA  L  +M+  G  P+ VA+N L++  CK   +  A 
Sbjct: 206 CVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRAS 265

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L+ +    G VP   +Y+ L+ GL    + D+A +   +M   K  P+ + +G ++ G 
Sbjct: 266 KLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGF 325

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + G+  D +++L  + E+G   + + Y++LI G    G  +    L  E+ ++   PNT
Sbjct: 326 VKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNT 385

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             ++ LI G+CR G  D+A++   +M+  G  P+   +++L+ G  +AG++ KA L++ +
Sbjct: 386 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 445

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M                +  H +     ++   C  G + +A  +  Q+   G   D++ 
Sbjct: 446 M-------------TDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVA 492

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKG--LRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           Y+S+I+GFC    +   +KLF ++      L+PD VTY  L+N     +    A  I   
Sbjct: 493 YSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNT 552

Query: 557 MPQNGCTP 564
           M   GC P
Sbjct: 553 MLDQGCDP 560



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 234/450 (52%), Gaps = 26/450 (5%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDL----YWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           ++ ++SF   + V++++++   FDL    Y   +D     N+      F ++I    +VG
Sbjct: 133 KQTVKSF---NTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVG 189

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           + ++A+E F  M + +C  D Y Y+ +++    +     A+++  EM      PN V F+
Sbjct: 190 NVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFN 249

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI+ L K G    A K++D M  +G +PN+ TY  ++ GLC   + D+A  L  +M  +
Sbjct: 250 VLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVAN 309

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            C P+ + +  L++GF K  R  + + +L S E+ G+     SYS LI GLF+  + +  
Sbjct: 310 KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHG 369

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +++M E+  +P+ ++Y  +I GL   GK  +A + L +M+ +G  P+++ Y++L+ G
Sbjct: 370 MQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWG 429

Query: 353 FCDLGLLDQARSLQVEIWKR--DSLPNTHT--FTILICGMCRNGMVDDAQKLFNKMEKAG 408
           + + G + +A    + +WK   D+  N H   ++ILI G+C+NG + +A  ++ +M   G
Sbjct: 430 YFEAGDIHKA----ILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRG 485

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
               V  ++++I G C A  +E+   LF +M +  NP L            D  +   ++
Sbjct: 486 IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQM-LCHNPKL----------QPDVVTYNILL 534

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             +CT   + +A  IL  + + G  PD IT
Sbjct: 535 NAFCTKNSVSRAIDILNTMLDQGCDPDFIT 564



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 197/404 (48%), Gaps = 14/404 (3%)

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I P+   +N +IK  C +G +DQA  +   +  R+ + + +T++ L+ G+C  G +D+A 
Sbjct: 171 IQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAV 230

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M+  G FP+   FN LI  LCK G+L +A+ L   M        FL+       V
Sbjct: 231 SLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNM--------FLK-----GCV 277

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            ++ +  ++V   C  G + KA  +L ++  +  +P+ IT+ +L++GF K G     +++
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              L+ KG R +  +Y +LI+GL +  + E   +++ +M + GC P+  VY +L+   CR
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIE-EFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K   A    ++        +  +  S+   + + G++  AI    EM     +     
Sbjct: 398 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVC 457

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           Y+I + GLC++G++KEAL ++  ++     +   +   +IHG C    ++  M +F   L
Sbjct: 458 YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
            +   L+P V  Y +    F   N    A  +L  M   G D D
Sbjct: 518 CHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPD 561


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 236/467 (50%), Gaps = 15/467 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G    G    ALE F KM     Q D+ +Y  ++N   + +    A+ ++  M+  
Sbjct: 14  TLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSE 73

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C  N  T+ L+I+ L K G     +KM  EM   GI PN   Y+ +I+GLC++ +  EA
Sbjct: 74  ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREA 133

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             LF +M   G   + + YN+L++  C+     EA         +G +P + +++ LID 
Sbjct: 134 VNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDH 193

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EAY  +  M ++   P++V Y  ++ GL    ++  A++L   M ERGI  D
Sbjct: 194 LSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKID 253

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G+C  G  ++A +L  ++   +  P+  T+TIL+  + +NG +  A++LFN
Sbjct: 254 VISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFN 313

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDK 461
            M+  G  PS+  +  L+DGLCK G +E+A  +F  ++ I   P++         R++  
Sbjct: 314 NMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI---------RIYS- 363

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                ++     A     A +I  ++   G +P+I+TYN +ING CK G +  A +LF +
Sbjct: 364 ----ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           ++  G   D +++  +I G  + ++ + A     +M +   +P+ +V
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSV 466



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 237/511 (46%), Gaps = 25/511 (4%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+VT S L+ G+   GK   A+++ D+MT+ G   +   Y  +I+ L +  +A  A  L
Sbjct: 7   PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M    CS +F  Y  +++  CK     + L + R     G  P +  YS LI+GL R
Sbjct: 67  HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  EA   + +M  + I+ +V+ Y  +I      G  K+A +  S M   GI+PD   
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +  LI      G + +A  +   + K+   PN  T+  L+ G+C +  +D A +LF  M 
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASL 464
           + G    V  +N LI+G C +G+ E+A  LF KM+  +  P++               + 
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI--------------TTY 292

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++     G I  A ++   +   G  P + TY  L++G CK G I  A+ +F+ L+ 
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
              +P    Y  LI G+ +  R E A  IF ++P  G  P+   Y  ++   C+  K   
Sbjct: 353 IKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLE 412

Query: 585 AFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEM---DFKLNDFQLAPYTI 640
           A  L++Q       +D+ S    I  FLQ+ +V+ A++ L  M   +F  ND      T+
Sbjct: 413 AERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND----SVTL 468

Query: 641 WLIGL-CQDGQVKEALNIF-SVLVECKAIVT 669
            L+ L   D Q  E  N F   LV+ K + T
Sbjct: 469 MLVNLYAADAQSSELPNNFLHELVQKKTLKT 499



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 61/459 (13%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           +L+ + L E+ SGN       + ++I    K G   K L+ F +M      P+V +Y+++
Sbjct: 65  ELHRRMLSEICSGNFFT----YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +N   R      A+ ++ EMV      N++T++ LI+   + G  + A +   +M   GI
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           LP+  T+T +I  L +  +  EAY++F  M   G +P+ V YN+LLNG C   ++D A+ 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L     + G    + SY+ LI+G   + + +EA   +RKM  E++ P +  Y ++++ L 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA----RSLQVEIWKRDSL 375
           + G+++ A +L ++M+  G  P    Y  L+ G C  G +++A    RSL+   +K    
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYK---- 356

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+   ++ILI GM +    + A ++F+++   G  P++  +N +I+GLCK G+L +A  L
Sbjct: 357 PSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERL 416

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F +ME                                                ESG   D
Sbjct: 417 FVQME------------------------------------------------ESGCEQD 428

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRP-DSVT 533
            I++N +I GF +   +  A++  K ++ K   P DSVT
Sbjct: 429 EISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVT 467



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 228/512 (44%), Gaps = 57/512 (11%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           SG  P+ V  + L+ G C   +V +AL L     + GF   +  Y  LI+ L + ++   
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   +R+M  E    +   YG++I  L + G     +K+  +M   GI P+   Y++LI 
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C +G L +A +L  E+  +    N  T+  LI   CR G+  +A + F++M   G  P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  F  LID L K G++++A  +F  M + G+ P +               +  +++  
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNI--------------VTYNSLLNG 228

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C    +  A ++   + E G   D+I+YN+LING+C  G    A+ LF+++Q + L P 
Sbjct: 229 LCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPS 288

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
             TY  L+  L +  R   A  +F  M   G +PS   Y  L+   C+      A  ++ 
Sbjct: 289 ITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVF- 347

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                       S+KSI+                   +K +   +  Y+I + G+ Q  +
Sbjct: 348 -----------RSLKSIK-------------------YKPS---IRIYSILIGGMFQARR 374

Query: 651 VKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            + A+ IF    E   +   P+ V    +I+GLCK G L  A  +F+   ++G       
Sbjct: 375 WESAMEIFD---EIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEIS 431

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
            N+++R  L  ++N+   A   L RM+   + 
Sbjct: 432 FNFIIRGFL--QENQVQKAMEFLKRMREKNFS 461



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 211/479 (44%), Gaps = 55/479 (11%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G+ P L + S L+ G+    +  +A   + KM     + D++LYG +I  L +  + +
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++L   M       + + Y  +I   C  GL  +   +  E+      PN   ++ LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G+CR G + +A  LF++M   G   +V  +N+LI   C+ G  ++A   F +M      
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM------ 175

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                   G   + D  +  T+++     G + +AYKI   + + G  P+I+TYNSL+NG
Sbjct: 176 -------VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNG 228

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C    ++ A++LF+ +  +G++ D ++Y TLING     + E+A  +F +M     TPS
Sbjct: 229 LCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPS 288

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y  L+                                  +   Q G +  A +    
Sbjct: 289 ITTYTILL----------------------------------KALYQNGRIRTAKELFNN 314

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCK 682
           M        L  YT+ L GLC++G ++EA+++F  L   K+I   PS      LI G+ +
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL---KSIKYKPSIRIYSILIGGMFQ 371

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
               + AM++F      G +  P +  Y +      K+ K + A  L  +M+  G + D
Sbjct: 372 ARRWESAMEIFDEIPTVGLV--PNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQD 428


>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 257/572 (44%), Gaps = 54/572 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAK------RKRLRSFASNSAVISMLLKPNGFD-- 80
           LS   V S++    NP    RF+IW +       +K+L        V+   L   G D  
Sbjct: 120 LSPQFVVSILQNQDNPLSAIRFYIWVSNVDPLLVKKQLIQ-----GVLVRNLHREGPDRP 174

Query: 81  --LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
             L    L +++   + V  ++  +L   + ++G     +E FG++      P   +YNA
Sbjct: 175 VLLSVDLLQQIKESGLKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNA 234

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           V++   +     LA   + +M   NC+P+  T+++LI+G+ + G  + A++++ +M   G
Sbjct: 235 VMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLG 294

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN FTYTI+I G     RA E +++   MK+    P+     +L++G  +    D+A 
Sbjct: 295 YFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAF 354

Query: 259 ALLRSF--EKDG------------------------FVPRLGSYSCLIDGLFRAKRYDEA 292
            LL  F   K G                        F P   +++  +  + +       
Sbjct: 355 ELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITLACVLKKLDLKVT 414

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +    +  ++P    Y  +I  L +AGK++   + +  +   G++ + Y YN +I  
Sbjct: 415 CTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDC 474

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C    +D+A  +  ++  R   PN  T+  LI G CRNG +D AQ+L   + ++   P 
Sbjct: 475 LCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPD 534

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           +  FN+LIDGLC+A + E A   F +M     P              +  +   ++  +C
Sbjct: 535 IFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPP-------------NVITYNILICSFC 581

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + ++  +L Q+   G  PD  ++N+LI G+        A KLF  +   G++PD+ 
Sbjct: 582 AIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNY 641

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           TYG LI  L +  R + A  IF  M +NGCTP
Sbjct: 642 TYGALIKSLCKSGRHDKAREIFLSMKENGCTP 673



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 120/245 (48%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI   YK G  E       ++       ++Y YN V++   + +    A  ++ ++
Sbjct: 432 TYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDL 491

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PNIVT++ LI G  ++G  + A ++L+ + +    P+ FT+  +I GLCQ ++ 
Sbjct: 492 HNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKH 551

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A+  F +M +    P+ + YN L+  FC +  V  +  LLR  +  G  P   S++ L
Sbjct: 552 ENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNAL 611

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G     R+ +A   +  M    I+PD   YG +I+ L ++G+   A ++   M+E G 
Sbjct: 612 IQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGC 671

Query: 340 VPDTY 344
            PD+Y
Sbjct: 672 TPDSY 676



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 196/480 (40%), Gaps = 44/480 (9%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P    Y+ ++D L ++   D AY  +++M      PD   Y ++I G+   G V +A
Sbjct: 224 GLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEA 283

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           ++L+  M   G  P+ + Y  LI GF +     +   +   + +R+ +PN  T   L+ G
Sbjct: 284 LRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVHG 343

Query: 388 MCRNGMVDDAQKLF------------------------NKMEKAGCF--PSVGMFNALID 421
           + R    D A +L                         N M        PS   FN  + 
Sbjct: 344 VFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNNSMASEAVMFXPSSSTFNITLA 403

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            + K            K+++    T+F    Q G +      L T++E    AG +    
Sbjct: 404 CVLK------------KLDLKVTCTVFDNCVQSGVKPGFSTYL-TLIEALYKAGKMEIGN 450

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           + + +L   G + +I +YN +I+  CK  +++ A ++F++L  +G+ P+ VTY TLI G 
Sbjct: 451 RYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGF 510

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRD 600
            R    + A  +   + ++   P    + SL+   C+  K   AF  + + +  D+    
Sbjct: 511 CRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNV 570

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI--WLIGLCQDGQVKEALNIF 658
                 I  F   G+V  +   L +M  KL+  Q   ++    + G     + ++A  +F
Sbjct: 571 ITYNILICSFCAIGDVSRSTHLLRQM--KLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 628

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
             ++         +   LI  LCK G  D A ++FL   +NG       C+    +L  S
Sbjct: 629 DSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 688



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           F +  T+   + K    ++G R+         + +  S + VI  L K    D   +   
Sbjct: 430 FSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFR 489

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +L +  +S     +  LI G+ + G+ +KA E    + E   +PD++ +N++++   +  
Sbjct: 490 DLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAH 549

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A   + EMV+ +  PN++T+++LI      G    +  +L +M   GI P+ F++ 
Sbjct: 550 KHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFN 609

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G    NR  +A +LF  M   G  PD   Y AL+   CK  R D+A  +  S +++
Sbjct: 610 ALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKEN 669

Query: 268 GFVPRLGSYSC 278
           G  P   SY+C
Sbjct: 670 GCTP--DSYTC 678



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  +  +GD  ++     +MK    QPD + +NA++     K  F  A  ++  M
Sbjct: 572 TYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSM 631

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           ++L   P+  T+  LI  L KSG+ + A ++   M + G  P+ +T ++
Sbjct: 632 LRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSL 680


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 181/747 (24%), Positives = 329/747 (44%), Gaps = 56/747 (7%)

Query: 29  LSKTTVTSVI--MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL 86
           LS+T V  V+  ++T  P V   FF +       R    +  V+S +L   G    ++ L
Sbjct: 80  LSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKG---RFKEL 136

Query: 87  DELRS--------GNVSVVSDVFF--------------VLISGYYKVGDCEKALESFGKM 124
           D +          G+ S++ D+                +L   Y +      AL    KM
Sbjct: 137 DSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKM 196

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI-VTFSLLINGLSKSGK 183
           K+ + Q  V  YN++L+      +      VY E +K++  P    T S+LI+GL +  K
Sbjct: 197 KDLNFQASVPTYNSLLHNMRHTDIM---WDVYNE-IKVSGAPQSECTTSILIHGLCEQSK 252

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            E AI  L + + + + P+  +   ++S  C++   D A   F  M  +G   D  +YN 
Sbjct: 253 LEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNI 311

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           LL+G C    +DEAL      EK G  P + +Y+ L  G         A    +KM  + 
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD+V Y  +I G  + G +++A+KL  +   RG   +   YN L+   C +G +++A 
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +L  E+      P+   ++ILI G+C+ G V  A +L+ +M     FP      A++ GL
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491

Query: 424 CKAGELEKANLLF---YKMEIGKNPTLFLRLSQGGNRVHDKA------------------ 462
            K G + +A   F    +M++ ++  L+  +  G  R+   A                  
Sbjct: 492 FKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551

Query: 463 -SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  +C  G + +A K+L  +   G +P ++TY +L+N +C+VGN+        E
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHE 611

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++   + P  VTY  LI GL R ++  ++ ++   M   G  P    Y +++   C+ ++
Sbjct: 612 MEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKE 671

Query: 582 FSLAFSLW-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
            + A  L+ +  L +           I      G++++  + ++ ++ +    +   Y  
Sbjct: 672 ITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMT 731

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            +   C  GQV +AL  F+ ++    +++      +I+ LCKRG +  A   F+  L  G
Sbjct: 732 IIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEG 791

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAY 727
               P +C  +L +     +N  V  +
Sbjct: 792 VTPDPEICKTVLNAFHQQGNNSSVFEF 818


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 252/526 (47%), Gaps = 18/526 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N +++S        +   + A+ + + + +R   P  F +  ++  L +         L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            KM+  G  P+ V  N L+N FC+L  +  A ++     K G+VP   +++ L  GL   
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            +  +A+ ++ K+       D + YG +I GL + G+ + A+ LL  +    + P+   Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N +I   C + L+++A  L  E+  +   P+  T++ LI G C  G + DA  LFNKM  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
               P V  FN L++  CK G++++   +F   M+ G  P                 +  
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF--------------VTYN 334

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++ YC    ++KA  I   +A+ G  PDI +Y+ +INGFCK+   + A+ LFKE+  K
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            + PD VTY +LI+GL +  R   A ++  QM   G  P+   Y S++   C+  +   A
Sbjct: 395 NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKA 454

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            +L  ++ +D   + D S  S  I+   Q G++E+A +   ++  K  +  +  YTI + 
Sbjct: 455 IALLTKF-KDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           G C +G   EAL + S + +   I    +   +I  L K+   D+A
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 236/483 (48%), Gaps = 13/483 (2%)

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           + ++   D + A+  F ++   +  P  + +N +L    + + +   L +  +M      
Sbjct: 58  TTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 117

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+V  ++LIN   + G    A  +  ++ + G +P+  T+T +  GLC   +  +A+  
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLF 177

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             K+   G   D ++Y  L++G CK+     AL LL+  + +   P +  Y+ +ID + +
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            K  +EA+  + +M  + I PDVV Y  +I G    GK+KDA+ L + M    I PD Y 
Sbjct: 238 VKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N L+  FC  G + + +++   + K+   PN  T+  L+ G C    V+ A+ +FN M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + G  P +  ++ +I+G CK  + ++A  LF +M                N + D  +  
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-------------HRKNIIPDVVTYS 404

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++    +G I  A +++ Q+ + G  P+I TYNS+++  CK   ++ A+ L  + + K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +PD  TY  LI GL +  + EDA ++F  +   G       Y  ++   C    F+ A
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524

Query: 586 FSL 588
            +L
Sbjct: 525 LAL 527



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 193/338 (57%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI G  KVG+   AL+   ++     QP+V +YN +++   + +L   A  ++ EMV  
Sbjct: 195 TLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK 254

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT+S LI+G    GK + AI + ++M    I P+ +T+ I+++  C+  +  E 
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F  M   G  P+FV YN+L++G+C ++ V++A ++  +  + G  P + SYS +I+G
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + K++DEA   +++M  + I PDVV Y  +I GLS++G++  A++L+  M +RG+ P+
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN+++   C    +D+A +L  +   +   P+  T++ILI G+C++G ++DA+K+F 
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            +   G    V  +  +I G C  G   +A  L  KME
Sbjct: 495 DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKME 532



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 176/337 (52%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            +I    KV    +A + F +M      PDV  Y+A+++          A+ ++ +M+  
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N  P++ TF++L+N   K GK +    + D M ++GI PN  TY  ++ G C +   ++A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F  M   G +PD  +Y+ ++NGFCK+++ DEA+ L +   +   +P + +YS LIDG
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L ++ R   A     +M +  + P++  Y  ++  L +  +V  A+ LL+  +++G  PD
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ LIKG C  G L+ AR +  ++  +    + + +TI+I G C  G+ ++A  L +
Sbjct: 470 ISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLS 529

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           KME  GC P    +  +I  L K  E + A  L  +M
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 178/331 (53%), Gaps = 4/331 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDL+ + + +  S +V   S     LISG+  +G  + A++ F KM   + +PDVY +N
Sbjct: 244 AFDLFSEMVSKGISPDVVTYS----ALISGFCILGKLKDAIDLFNKMILENIKPDVYTFN 299

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            ++N   +         V+  M+K    PN VT++ L++G     +   A  + + M Q 
Sbjct: 300 ILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG 359

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ P+  +Y+I+I+G C+I + DEA  LF +M      PD V Y++L++G  K  R+  A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L+      G  P + +Y+ ++D L +  + D+A A   K  ++  +PD+  Y ++I+G
Sbjct: 420 LQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKG 479

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L ++GK++DA K+  D+  +G   D Y Y  +I+GFC  GL ++A +L  ++     +P+
Sbjct: 480 LCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             T+ I+I  + +    D A+KL  +M   G
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARG 570



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 130/241 (53%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V +  KA   F  M +    PD+  Y+ ++N   + + F  A+ ++ EM + N
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P++VT+S LI+GLSKSG+   A++++D+M  RG+ PN  TY  ++  LC+ ++ D+A 
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  K KD G  PD   Y+ L+ G C+  ++++A  +       G+   + +Y+ +I G 
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                ++EA A   KM +    PD   Y ++I  L +  +   A KLL +M  RG+  + 
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF 575

Query: 344 Y 344
           Y
Sbjct: 576 Y 576



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +I+   K   FD       E+   N+      +  LI G  K G    AL+   +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    P++  YN++L+   +      A+A+  +       P+I T+S+LI GL +SGK 
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A K+ +++  +G   + + YTI+I G C     +EA  L  KM+D+GC PD   Y  +
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 245 LNGFCKLRRVDEALALLR 262
           +    K    D A  LLR
Sbjct: 547 ILSLFKKDENDMAEKLLR 564



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  L K +  D     L + +          + +LI G  + G  E A + F  +  
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLV 498

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                DVY Y  ++     + LF  ALA+  +M    C+P+  T+ ++I  L K  + ++
Sbjct: 499 KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDM 558

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           A K+L EM  RG LP  F Y + ++ L Q
Sbjct: 559 AEKLLREMIARG-LPLNF-YDLYLTRLAQ 585


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 270/567 (47%), Gaps = 28/567 (4%)

Query: 64  ASNSAVISMLLK----PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
            SN +V  +L++           ++    LRS   +V  D    LI    ++G  E A  
Sbjct: 152 GSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWR 211

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            + ++       +VY  N ++N   +            E+ +    P+IVT++ LI+  S
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
             G  E A +++  M  +G  P  +TY  VI+GLC+  + + A  +F +M  SG SPD  
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            Y +LL   CK     E   +         VP L  +S ++    R+   D+A  ++  +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            E  + PD V+Y ++I+G    G + +AM L ++M ++G   D   YN ++ G C   +L
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A  L  E+ +R   P+++T TILI G C+ G + +A +LF KM++      V  +N L
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511

Query: 420 IDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL-----SQG----GNRVHDK---ASL 464
           +DG  K G+++ A  ++  M   EI   P  F  L     S+G      RV D+    S+
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571

Query: 465 Q-------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           +       +M++ YC +G        L ++   G +PD I+YN+LI GF K  N++ A  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 518 LFKELQLK--GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L K+++ K  GL PD  TY ++++G  R ++ ++A  +  +M + G  P  + Y SL+  
Sbjct: 632 LVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLING 691

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDE 602
              +   + AF    + L+     DD+
Sbjct: 692 FVSQDNLTEAFRFHDEMLQRGFSPDDK 718



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 250/579 (43%), Gaps = 55/579 (9%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           NC  N   F LLI    ++ K   A +    +  +G   +      +I  L +I   + A
Sbjct: 150 NCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELA 209

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +R++ ++  SG   +    N ++N  CK  ++++    L   ++ G  P + +Y+ LI  
Sbjct: 210 WRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISA 269

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                  +EA+     M  +   P V  Y  +I GL + GK + A ++ ++M   G+ PD
Sbjct: 270 YSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 329

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           +  Y +L+   C  G   +  ++  ++  RD +P+   F+ ++    R+G +D A   FN
Sbjct: 330 STTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 389

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +++AG  P   ++  LI G C+ G + +A  L  +M           L QG     D  
Sbjct: 390 SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEM-----------LQQGC--AMDVV 436

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++   C   ++ +A K+  ++ E G  PD  T   LI+G CK+GN+  A++LFK++
Sbjct: 437 TYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           + K ++ D VTY TL++G  +V   + A  I+  M      P+P  +  L+   C +   
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556

Query: 583 SLAFSLWLQ-------------------YLRDISGRDDESMKSIEEFLQKGEVENAIQ-- 621
           S AF +W +                   Y R  +  D E    +E+ + +G V + I   
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIF--LEKMISEGFVPDCISYN 614

Query: 622 ----GLLEMDFKLNDFQLA---------------PYTIWLIGLCQDGQVKEALNIFSVLV 662
               G ++ +     F L                 Y   L G C++ Q+KEA  +   ++
Sbjct: 615 TLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI 674

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           E        +   LI+G   +  L  A       L+ GF
Sbjct: 675 ERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGF 713



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 226/517 (43%), Gaps = 55/517 (10%)

Query: 232 SGCSPDFVAYNALLNGFC---KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           S C  +   ++ L+  F    KLR   EA  LLRS    G+   + + + LI  L R   
Sbjct: 149 SNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRS---KGYTVSIDACNALIGSLVRIGW 205

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            + A+  Y+++    +  +V    +M+  L + GK++     LS+++E+G+ PD   YN 
Sbjct: 206 VELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI  +   GL+++A  L   +  +   P  +T+  +I G+C++G  + A+++F +M ++G
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P    + +L+   CK G+  +   +F  M             +  + V D     +M+
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDM-------------RSRDVVPDLVCFSSMM 372

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             +  +G + KA      + E+G +PD + Y  LI G+C+ G I+ A+ L  E+  +G  
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            D VTY T+++GL +     +A ++F +M + G  P       L+   C+          
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL--------- 483

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
                                    G ++NA++   +M  K     +  Y   L G  + 
Sbjct: 484 -------------------------GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKV 518

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G +  A  I++ +V  + + TP S   L++ LC +G+L  A  V+   +         +C
Sbjct: 519 GDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMIC 578

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           N +++   + +          L +M S G+  D   Y
Sbjct: 579 NSMIKG--YCRSGNASDGEIFLEKMISEGFVPDCISY 613



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 4/190 (2%)

Query: 52  IWA--AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           IWA    ++ L +  S S +++ L         ++  DE+ S ++     +   +I GY 
Sbjct: 527 IWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYC 586

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPN 167
           + G+         KM      PD   YN ++    +++    A  +  +M +     +P+
Sbjct: 587 RSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPD 646

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + T++ +++G  +  + + A  +L +M +RG+ P++ TYT +I+G    +   EA+R   
Sbjct: 647 VFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHD 706

Query: 228 KMKDSGCSPD 237
           +M   G SPD
Sbjct: 707 EMLQRGFSPD 716


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 233/457 (50%), Gaps = 16/457 (3%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y  +L        F  AL ++  MV+   LP+I+ F+ L+N ++K  K +V I +   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G+  + +T  ++++  CQ ++   A     K+   G  PD   + +L+NGFC   R++
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA++++    + G  P +  Y+ +ID L +    D A + + +M    I PDVV+Y  ++
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL  +G+ +DA  LL  M +R I PD   +NALI  F   G L  A+ L  E+ +    
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN  T+T LI G+C  G +D+A+++F  ME  GCFP V  + +LI+G CK  ++E A  +
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           FY+M            SQ G    +  +  T+++ +   G  + A ++   +   G  P+
Sbjct: 339 FYEM------------SQKG-LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPN 385

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQ---LKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           I TYN L++  C  G +N AL +F+++Q   + G+ P+  TY  L++GL    + E A  
Sbjct: 386 IRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALM 445

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +FG M +         Y  ++   C+  K   A +L+
Sbjct: 446 VFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 228/467 (48%), Gaps = 29/467 (6%)

Query: 113 DCEKALESFGKMKEFD-----CQP--------DVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           D  + L    KMK+FD     C+         D+Y  N ++N   +     LA +   ++
Sbjct: 73  DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P+I TF+ LING     + E A+ M+++M + GI P+   YT +I  LC+    
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  LF +M++ G  PD V Y +L+NG C   R  +A  LLR   K    P + +++ L
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +  +  +A   Y +M +  I P++  Y  +I GL   G++ +A ++   M  +G 
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGC 312

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y +LI GFC    ++ A  +  E+ ++    NT T+T LI G    G  + AQ+
Sbjct: 313 FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQE 372

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGN 456
           +F  M   G  P++  +N L+  LC  G++ KA ++F  M   EI   P           
Sbjct: 373 VFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP---------- 422

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              +  +   ++   C  G + KA  +   + +      IITY  +I G CK G +  AL
Sbjct: 423 ---NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDAL 479

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            LF  L  KG++P+ VTY T+I+GL R     +A  +F +M ++G +
Sbjct: 480 NLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 230/464 (49%), Gaps = 18/464 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            +AL+ F  M E    P +  +  +LN+  + + F + + +   +  +    ++ T +LL
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           +N   +S +  +A   L ++ + G  P+ FT+T +I+G C  NR +EA  +  +M + G 
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V Y  +++  CK   VD AL+L    E  G  P +  Y+ L++GL  + R+ +A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             R M + KI+PDV+ +  +I    + GK+ DA +L ++M +  I P+ + Y +LI G C
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G LD+AR +   +  +   P+   +T LI G C+   V+DA K+F +M + G   +  
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +  LI G    G+   A  +F  M   G  P +               +   ++   C 
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNI--------------RTYNVLLHCLCY 398

Query: 474 AGLIHKAYKIL--MQLAE-SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            G ++KA  I   MQ  E  G  P+I TYN L++G C  G +  AL +F ++Q + +   
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            +TY  +I G+ +  + +DA  +F  +P  G  P+   Y ++++
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMIS 502



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 189/379 (49%), Gaps = 38/379 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE- 158
            F  LI+G+      E+A+    +M E   +PDV IY  +++   +      AL+++ + 
Sbjct: 143 TFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM 202

Query: 159 ----------------------------------MVKLNCLPNIVTFSLLINGLSKSGKT 184
                                             M+K    P+++TF+ LI+   K GK 
Sbjct: 203 ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKL 262

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A ++ +EM Q  I PN FTYT +I+GLC   R DEA ++F  M+  GC PD VAY +L
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NGFCK ++V++A+ +     + G      +Y+ LI G     + + A   +  M    +
Sbjct: 323 INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGV 382

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER---GIVPDTYCYNALIKGFCDLGLLDQ 361
            P++  Y V++  L   GKV  A+ +  DM++R   G+ P+   YN L+ G C  G L++
Sbjct: 383 PPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEK 442

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  +  ++ KRD      T+TI+I GMC+ G V DA  LF  +   G  P+V  +  +I 
Sbjct: 443 ALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMIS 502

Query: 422 GLCKAGELEKANLLFYKME 440
           GL + G + +A++LF KM+
Sbjct: 503 GLFREGLMLEAHVLFRKMK 521



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 210/484 (43%), Gaps = 54/484 (11%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  LF  M +S   P  + +  LLN   K+++ D  + L +  +  G    L + + L
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++   ++ +   A ++  K+ +   EPD+  +  +I G     ++++AM +++ M E GI
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y  +I   C  G +D A SL  ++      P+   +T L+ G+C +G   DA  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L   M K    P V  FNALID   K G+L  A  L+ +M ++   P +F          
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIF---------- 282

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  +++   C  G + +A ++   +   G  PD++ Y SLINGFCK   +  A+K+
Sbjct: 283 ----TYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F E+  KGL  +++TY TLI G   V +   A  +FG M   G  P+   Y  L+   C 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 579 RRKFSLAFSLW----------------------------------LQYLRDISGRDDESM 604
             K + A  ++                                  L    D+  RD +  
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIG 458

Query: 605 KSI-----EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                   +   + G+V++A+     +  K     +  YT  + GL ++G + EA  +F 
Sbjct: 459 IITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFR 518

Query: 660 VLVE 663
            + E
Sbjct: 519 KMKE 522



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 19/443 (4%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +AL+  R      +V    +Y  ++     + +++EA   +  M E +  P ++ +  ++
Sbjct: 19  KALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLL 78

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             +++  K    + L   ++  G+  D Y  N L+  FC       A S   ++ K    
Sbjct: 79  NVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFE 138

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  TFT LI G C    +++A  + N+M + G  P V ++  +ID LCK G ++ A  L
Sbjct: 139 PDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSL 198

Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F +ME  G  P              D     ++V   C +G    A  +L  + +    P
Sbjct: 199 FNQMENYGIRP--------------DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKP 244

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+IT+N+LI+ F K G +  A +L+ E+    + P+  TY +LINGL    R ++A ++F
Sbjct: 245 DVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMF 304

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQK 613
             M   GC P    Y SL+   C+ +K   A  ++ +   + ++G        I+ F   
Sbjct: 305 YLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLV 364

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G+   A +    M  +     +  Y + L  LC +G+V +AL IF  + + +    PP+ 
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNI 424

Query: 674 VK---LIHGLCKRGYLDLAMDVF 693
                L+HGLC  G L+ A+ VF
Sbjct: 425 RTYNVLLHGLCYNGKLEKALMVF 447



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 172/345 (49%), Gaps = 3/345 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D      +++ +  +     ++  L++G    G    A      M +
Sbjct: 180 TTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK 239

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  +NA+++   ++   L A  +Y EM++++  PNI T++ LINGL   G+ + 
Sbjct: 240 RKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDE 299

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M   M  +G  P+   YT +I+G C+  + ++A ++F +M   G + + + Y  L+ 
Sbjct: 300 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQ 359

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE- 305
           GF  + + + A  +       G  P + +Y+ L+  L    + ++A   +  M + +I+ 
Sbjct: 360 GFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDG 419

Query: 306 --PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P++  Y V++ GL   GK++ A+ +  DM++R +      Y  +I+G C  G +  A 
Sbjct: 420 VPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDAL 479

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +L   +  +   PN  T+T +I G+ R G++ +A  LF KM++ G
Sbjct: 480 NLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 5/251 (1%)

Query: 94  VSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           +S+  ++F    LI+G    G  ++A + F  M+   C PDV  Y +++N   + +    
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++YEM +     N +T++ LI G    GK  VA ++   M  RG+ PN  TY +++ 
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLH 394

Query: 212 GLCQINRADEAYRLFLKMKD---SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
            LC   + ++A  +F  M+     G  P+   YN LL+G C   ++++AL +    +K  
Sbjct: 395 CLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRD 454

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               + +Y+ +I G+ +A +  +A   +  +  + ++P+VV Y  MI GL   G + +A 
Sbjct: 455 MDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAH 514

Query: 329 KLLSDMRERGI 339
            L   M+E G+
Sbjct: 515 VLFRKMKEDGV 525



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 38/174 (21%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G+  VG    A E FG M      P++  YN +L+          AL ++ +M
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 160 VKL---NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR------------------- 197
            K       PNI T+++L++GL  +GK E A+ +  +M +R                   
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 198 ----------------GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
                           G+ PN  TYT +ISGL +     EA+ LF KMK+ G S
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 237/470 (50%), Gaps = 17/470 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD++ +N ++N          A ++  +++K+   P+ +TF+ LI GL  +GK + A+  
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D +   G   ++F+Y  +I+GLC+I     A ++  K+       + V YN +++  CK
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            + V +A  L          P + ++S LI G     + +EA+  +R+M  + I PD   
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + +++  L + G +K A  +L  M + G++P+   Y++L+ G+C +  +++A+ +   I 
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +  + PN H++  +I G C+  MVD+A  LFN M+  G  P    +N+LIDGLCK+G + 
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  L  +M     P              +  +   +++  C    + +A  ++ ++ + 
Sbjct: 401 YAWELVDEMHDNGQPA-------------NIFTYNCLIDALCKNHHVDQAIALVKKIKDQ 447

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  PD+ T+N LI G CKVG +  A  +F++L  KG   ++ TY  ++NGL +    ++A
Sbjct: 448 GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEA 507

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
             +  +M  NG  P    Y++L+     + +   A  L    LR++  RD
Sbjct: 508 EALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKL----LREMIARD 553



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 234/508 (46%), Gaps = 49/508 (9%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N    A  L  +++  G +PD   +N L+N +C +  ++ A +++    K G+ P   ++
Sbjct: 82  NHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI GL    +  EA  ++  +       D   YG +I GL + G+ + A+++L  +  
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           + +  +   YN +I   C   L+  A  L  ++  +   P+  TF+ LI G C  G +++
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGG 455
           A  LF +M      P    FN L+D LCK G L+ A N+L   M+ G  P +        
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNV-------- 313

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +  ++++ YC    ++KA  +L  +++ G  P+  +Y ++INGFCK+  ++ A
Sbjct: 314 ------VTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEA 367

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L LF ++Q KG+ PD VTY +LI+GL +  R   A+ +  +M  NG   +   Y  L+  
Sbjct: 368 LSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDA 427

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+      A +L               +K I++           QG+           +
Sbjct: 428 LCKNHHVDQAIAL---------------VKKIKD-----------QGIQP--------DM 453

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             + I + GLC+ G++K A ++F  L+     V   +   +++GLCK G  D A  +   
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              NG I        L+++L    +N+K
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEK 541



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 218/458 (47%), Gaps = 15/458 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI+ Y  + +   A     K+ +   +PD   +N ++           AL  +  ++
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            L    +  ++  LINGL K G+T  A++ML ++  + +  N   Y  +I  LC+     
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +AY L+ +M     SPD V ++AL+ GFC + +++EA  L R        P   +++ L+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L +      A      M +E + P+VV Y  ++ G     +V  A  +L+ + + G  
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+ + Y  +I GFC + ++D+A SL  ++  +   P+  T+  LI G+C++G +  A +L
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
            ++M   G   ++  +N LID LCK   +++A  L  K+ + G  P ++           
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMY----------- 454

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +   ++   C  G +  A  +   L   G   +  TYN ++NG CK G  + A  L 
Sbjct: 455 ---TFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            ++   G+ PD+VTY TLI  L   D  E A ++  +M
Sbjct: 512 SKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 39/332 (11%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + ++LY Q + +  S +V      F  LI G+  VG  E+A   F +M   +  PD Y +
Sbjct: 226 DAYELYSQMIAKKISPDVVT----FSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTF 281

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL---------------------- 174
           N +++   ++     A  +   M+K   +PN+VT+S L                      
Sbjct: 282 NILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQ 341

Query: 175 -------------INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
                        ING  K    + A+ + ++M  +GI P+K TY  +I GLC+  R   
Sbjct: 342 MGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISY 401

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A+ L  +M D+G   +   YN L++  CK   VD+A+AL++  +  G  P + +++ LI 
Sbjct: 402 AWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIY 461

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +  R   A   ++ +  +    +   Y +M+ GL + G   +A  LLS M + GI+P
Sbjct: 462 GLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIP 521

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           D   Y  LI+        ++A  L  E+  RD
Sbjct: 522 DAVTYETLIQALFHKDENEKAEKLLREMIARD 553



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 122/237 (51%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V    KA      + +    P+ + Y  ++N   + ++   AL+++ +M    
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKG 378

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ VT++ LI+GL KSG+   A +++DEM   G   N FTY  +I  LC+ +  D+A 
Sbjct: 379 IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  K+KD G  PD   +N L+ G CK+ R+  A  + +     G+     +Y+ +++GL
Sbjct: 439 ALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            +   +DEA A   KM +  I PD V Y  +I+ L    + + A KLL +M  R +V
Sbjct: 499 CKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 35/196 (17%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L K       W+ +DE+           +  LI    K    ++A+    K+K+
Sbjct: 387 NSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD 446

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPD+Y +N                                   +LI GL K G+ + 
Sbjct: 447 QGIQPDMYTFN-----------------------------------ILIYGLCKVGRLKN 471

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  ++  +G   N +TY I+++GLC+    DEA  L  KM D+G  PD V Y  L+ 
Sbjct: 472 AQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQ 531

Query: 247 GFCKLRRVDEALALLR 262
                   ++A  LLR
Sbjct: 532 ALFHKDENEKAEKLLR 547



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 61/134 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K +  D     + +++   +      F +LI G  KVG  + A + F  +  
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                + + YN ++N   ++ LF  A A+  +M     +P+ VT+  LI  L    + E 
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEK 541

Query: 187 AIKMLDEMTQRGIL 200
           A K+L EM  R ++
Sbjct: 542 AEKLLREMIARDVV 555


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 231/460 (50%), Gaps = 15/460 (3%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  + ++F ++LF   L     +   +C   I   S  ++G+  + K E  +K+++EM  
Sbjct: 157 NLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQI 216

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +G+ PN +TY  VI  LC+  +  EA R+  +M   G +PD V Y  L++GFCKL  V  
Sbjct: 217 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 276

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L    +K    P   +Y+ +I GL +  R  EA   + +M  +++EPD V Y  +I 
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  + GK+K+A  L + M + G+ P+   Y AL  G C  G +D A  L  E+ ++    
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N +T+  L+ G+C+ G +D A KL   ME AG  P    +  L+D  CK+ E+ +A+ L 
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M +    PT+               +   ++  +C +G++    K+L  + E G +P+
Sbjct: 457 RQMLDRELQPTV--------------VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TYNSLI  +C   N+    ++++ +  KG+ PD  TY  LI G  +    ++A+ +  
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            M   G   + + Y +L+    +R+KF  A  L+ Q  R+
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRRE 602



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 245/581 (42%), Gaps = 78/581 (13%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFR----FFIWAAKRK----RLRSFASNSAVI 70
           EP    L P+ SK     +I    N +  +R    FF WA  R+      R   +  A  
Sbjct: 79  EPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIATA 138

Query: 71  SMLLK------------PN---GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC- 114
           S  LK            PN   G     +  D++ +  + +  D   + IS   +  D  
Sbjct: 139 SKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGI 198

Query: 115 ------EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
                 E  L+   +M+    +P+ Y YN V+ +  +      A  V  EM+     P+ 
Sbjct: 199 KIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDG 258

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V ++ LI+G  K G    A ++ DEM +R I P+  TYT VI GLCQ  R  EA +LF +
Sbjct: 259 VIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 318

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M      PD V Y AL++G+CK  ++ EA +L     + G  P + +Y+ L DGL +   
Sbjct: 319 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A     +M  + +E ++  Y  ++ GL +AG +  A+KL+ DM   G  PD   Y  
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+  +C    + +A  L  ++  R+  P   TF +L+ G C +GM++D +KL   M + G
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P+   +N+LI                                                
Sbjct: 499 IMPNATTYNSLI------------------------------------------------ 510

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +QYC    +    +I   +   G +PD  TYN LI G CK  N+  A  L +++  KG  
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFN 570

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
               +Y  LI G  +  +  +A  +F QM + G      +Y
Sbjct: 571 LTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 189/429 (44%), Gaps = 49/429 (11%)

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G+  A K +  +KL+ +M+ +G+ P+ Y YN +I   C  G + +A  +  E+      P
Sbjct: 197 GIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 256

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +   +T LI G C+ G V  A +LF++M+K    P    + A+I GLC+ G + +A+ LF
Sbjct: 257 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 316

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           ++M       +  RL        D+ +   +++ YC  G + +A+ +  Q+ + G  P+I
Sbjct: 317 HEM-------VCKRLEP------DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 363

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TY +L +G CK G ++ A +L  E+  KGL  +  TY +L+NGL +    + A ++   
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M   G  P    Y +LM   C+ R+   A  L  Q L      D E   ++  F      
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML------DRELQPTVVTF------ 471

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
                                  + + G C  G +++   +   ++E   +    +   L
Sbjct: 472 ----------------------NVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I   C R  +    +++      G +      N L++    +++ K+  A+ L   M   
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKE--AWFLHRDMVGK 567

Query: 737 GYDLDACLY 745
           G++L    Y
Sbjct: 568 GFNLTVSSY 576



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 133/287 (46%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  + +A+   L K    D   + L E+    + +    +  L++G  K G+ ++A++  
Sbjct: 362 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 421

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M+     PD   Y  +++   + +  + A  +  +M+     P +VTF++L+NG   S
Sbjct: 422 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 481

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G  E   K+L  M ++GI+PN  TY  +I   C  N       ++  M   G  PD   Y
Sbjct: 482 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 541

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G CK R + EA  L R     GF   + SY+ LI G ++ K++ EA   + +M  
Sbjct: 542 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           E +  D  +Y +      + GK++  ++L  +  E+ +V D    N 
Sbjct: 602 EGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 39/280 (13%)

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K++ ++   G  P+  TYN +I   CK G +  A ++ +E+  +G+ PD V Y TLI+G 
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            ++     A+R+F +M +   +P    Y +++   C                        
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLC------------------------ 304

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                     Q G V  A +   EM  K  +     YT  + G C++G++KEA ++ + +
Sbjct: 305 ----------QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
           ++        +   L  GLCK G +D A ++     + G  L     N L+  L   K  
Sbjct: 355 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL--CKAG 412

Query: 722 KKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
               A  L+  M+  G+  DA  Y    +L+     +REM
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYT---TLMDAYCKSREM 449


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 270/570 (47%), Gaps = 55/570 (9%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+V  + ++ G  K G  E A ++++ M  +G+ PN  T+   IS LC+  R  +AYR+F
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIF 265

Query: 227 LKMKDSGCS----PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             M++        PD V ++ +L+GFC    VDEA  L+      GF+ R+ SY+  + G
Sbjct: 266 QDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L R  R  EA    R+M  E I+P+   Y +++ GL + GK  DA ++ + +R   + PD
Sbjct: 326 LVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y +L+  +C  G +  A  +  E+ ++   PN+ T+ +L+  + R G   +A++L  
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGKNPTLFLRL----S 452
           +M + G        N +IDGLC+   L+ A  +   M       +G+    FL +    S
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                + D+ +   ++   C  G   +A K L+++      PD + Y++ I+G+CK G  
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A+K+ ++++ KG  P + TY  LI G +   + E+  ++  +M + G +P+   Y SL
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSL 625

Query: 573 MTWSCRRRKFSLAFSLWLQYLR-----DISGRD-------------------DESMKS-- 606
           +   C++   + A  L  + L+     +I+  D                   D ++++  
Sbjct: 626 IKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCG 685

Query: 607 ---------IEEFLQKG---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                      E    G   E +N ++  LEM   +  F   PY   + GLC+ G+V  A
Sbjct: 686 QKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSF---PYKQIISGLCEVGEVDHA 742

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
            ++  +L+  + +  P + + +I  L  RG
Sbjct: 743 HSLLKLLIAKRHLFDPAAFMPVIDALGDRG 772



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 264/619 (42%), Gaps = 93/619 (15%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P   +YN ++  A R+    L  A+Y +++     P++ T +LL+  L  +G+ E+A ++
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D M  R    N+F++ I+  G C+  R+ +A    LK+ D   S + V  N ++ GFCK
Sbjct: 168 FDAMPAR----NEFSFGILARGYCRAGRSIDA----LKVLDGMPSMNLVVCNTVVAGFCK 219

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE----P 306
              V+EA  L+      G  P + +++  I  L +A R  +AY  ++ M E+       P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRP 279

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V + VM+ G  +AG V +A  L+  MR  G +     YN  + G    G + +A+ L 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+      PN++T+ I++ G+C+ G   DA+++ N +      P V  + +L+   C  
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 427 GELEKANLLFYKM-EIGKNPTLFL----------------------RLSQGGNRVHDKAS 463
           G +  AN +  +M + G  P  F                       R+++ G  + D A 
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSL-DTAG 458

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGN-----------------------LPDIITYN 500
              +++  C    +  A  I+  + E G+                       LPD ITY+
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+  CK G  + A K   E+ +K + PDSV Y T I+G  +  +   A ++   M + 
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           GC PS   Y  L+      R F            +   + +E MK + E  +KG   N +
Sbjct: 579 GCNPSTRTYNLLI------RGF------------EEKHKSEEIMKLMSEMKEKGISPNVM 620

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
                            Y   +   CQ G V +A+ +   +++ + +    S   LI   
Sbjct: 621 T----------------YNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAY 664

Query: 681 CKRGYLDLAMDVFLYTLKN 699
           CK      A  VF   L+ 
Sbjct: 665 CKITDFPSAQMVFDAALRT 683



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 220/497 (44%), Gaps = 41/497 (8%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D +R G      + +   +SG  + G   +A E   +M     QP+ Y YN +++   +
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCK 363

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  V   +      P++VT++ L++     G    A ++LDEM Q+G  PN FT
Sbjct: 364 EGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFT 423

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF- 264
           Y +++  L +  R  EA RL  +M + G S D    N +++G C+  R+D A+ ++    
Sbjct: 424 YNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMW 483

Query: 265 -EKDGFVPRLG---------------------SYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            E  G + RLG                     +YS LI  L +  R+DEA     +M  +
Sbjct: 484 EEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVK 543

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I PD V+Y   I G  + GK   A+K+L DM ++G  P T  YN LI+GF +    ++ 
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEI 603

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  E+ ++   PN  T+  LI   C+ GMV+ A  L ++M +    P++  F+ LI  
Sbjct: 604 MKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKA 663

Query: 423 LCKAGELEKANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            CK  +   A ++F       G+   L+                  M  +  T G   +A
Sbjct: 664 YCKITDFPSAQMVFDAALRTCGQKEVLYC----------------LMCTELTTYGKWIEA 707

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             IL    E         Y  +I+G C+VG ++ A  L K L  K    D   +  +I+ 
Sbjct: 708 KNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDA 767

Query: 541 LQRVDREEDAFRIFGQM 557
           L    +++D   +  +M
Sbjct: 768 LGDRGKKQDVDMLSAKM 784



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 209/450 (46%), Gaps = 46/450 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQ-----PDVYIYNAVLNIAFRKQLFLLALA 154
            F   IS   K G    A   F  M+E D Q     PD   ++ +L+  F    F+    
Sbjct: 244 TFNARISALCKAGRVLDAYRIFQDMQE-DWQHGLPRPDQVTFDVMLS-GFCDAGFVDEAR 301

Query: 155 VYYEMVKLNC-LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           V  ++++    L  + +++  ++GL ++G+   A ++L EM   GI PN +TY I++SGL
Sbjct: 302 VLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGL 361

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  +A +A R+   ++    SPD V Y +LL+ +C    +  A  +L    + G  P  
Sbjct: 362 CKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNS 421

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+  L+RA R  EA     +M E+    D     ++I GL    ++  AM ++  
Sbjct: 422 FTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDG 481

Query: 334 MRERG-----------------------IVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           M E G                        +PD   Y+ LI   C  G  D+A+   +E+ 
Sbjct: 482 MWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMI 541

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +D  P++  +   I G C++G    A K+   MEK GC PS   +N LI G  +  + E
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSE 601

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +   L  +M E G +P +               +  ++++ +C  G+++KA  +L ++ +
Sbjct: 602 EIMKLMSEMKEKGISPNVM--------------TYNSLIKSFCQQGMVNKAMPLLDEMLQ 647

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +P+I +++ LI  +CK+ +   A  +F
Sbjct: 648 NELVPNITSFDLLIKAYCKITDFPSAQMVF 677



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 153/636 (24%), Positives = 268/636 (42%), Gaps = 77/636 (12%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTI 208
           +AL ++  +    C P   + S L   +++    +  + +L     R IL  P+   + +
Sbjct: 23  VALRLFLHLSSAACPPPPRSTSFLARLVAEHPAADALLPLL----HRHILSFPDPSPHLL 78

Query: 209 VI---SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            +   S +  +  A  A+R  L+   S   P    YN L+    +  R+D   AL +   
Sbjct: 79  ALLSCSDVLPLRLAIPAFR-SLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLL 137

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P + + + L+  L  A R + A    +++F+     +   +G++ RG   AG+  
Sbjct: 138 LSGAQPDVFTRNLLLQALCDAGRMELA----QRVFDAMPARNEFSFGILARGYCRAGRSI 193

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           DA+K+L  M    +V    C N ++ GFC  GL+++A  L   +  +   PN  TF   I
Sbjct: 194 DALKVLDGMPSMNLV---VC-NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARI 249

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCF----PSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
             +C+ G V DA ++F  M++        P    F+ ++ G C AG +++A +L   M  
Sbjct: 250 SALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRC 309

Query: 442 GKNPTLFLRLSQGGNR---------------------VHD-----KASLQTMVEQYCTAG 475
           G     FLR  +  NR                      H+       +   +V   C  G
Sbjct: 310 GG----FLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEG 365

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
               A ++   +      PD++TY SL++ +C  GNI  A ++  E+  KG  P+S TY 
Sbjct: 366 KAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYN 425

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            L+  L R  R  +A R+  +M + G +   A    ++   CR  +  +A  +       
Sbjct: 426 VLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDI------- 478

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA---PYTIWLIGLCQDGQVK 652
           + G  +E   ++      G + N+   ++  D  ++   L     Y+I +  LC++G+  
Sbjct: 479 VDGMWEEGSGAL------GRLGNSFLSVVS-DSSISQRCLPDQITYSILISALCKEGRFD 531

Query: 653 EA-LNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           EA   +  ++V+    ++P S +    IHG CK G   LA+ V     K G     R  N
Sbjct: 532 EAKKKLLEMIVK---DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYN 588

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L+R   F + +K      L+  MK  G   +   Y
Sbjct: 589 LLIRG--FEEKHKSEEIMKLMSEMKEKGISPNVMTY 622



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 125/338 (36%), Gaps = 71/338 (21%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +IS L K   FD   + L E+   ++S  S ++   I GY K G    A++    M++
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P    YN                                   LLI G  +  K+E 
Sbjct: 578 KGCNPSTRTYN-----------------------------------LLIRGFEEKHKSEE 602

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            +K++ EM ++GI PN  TY  +I   CQ    ++A  L  +M  +   P+  +++ L+ 
Sbjct: 603 IMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIK 662

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK                   +    S   + D   R     E               
Sbjct: 663 AYCK-------------------ITDFPSAQMVFDAALRTCGQKE--------------- 688

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             VLY +M   L+  GK  +A  +L    E  +   ++ Y  +I G C++G +D A SL 
Sbjct: 689 --VLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLL 746

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             +  +  L +   F  +I  +   G   D   L  KM
Sbjct: 747 KLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKM 784


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 261/548 (47%), Gaps = 32/548 (5%)

Query: 58  KRLRSFA------SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           K +R F       + +AVI   +K   F    +  DE+ S  + +   V   L+ GY  +
Sbjct: 279 KEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVL 338

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           GD   AL+ F ++ E    PDV I++ ++N   +      A  +Y  M  +   PN+   
Sbjct: 339 GDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIV 398

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + L+ G  +    E A  + DE  + GI  N  TY I++  L ++ + +EA  L+ KM  
Sbjct: 399 NSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVS 457

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G +P  V+YN L+ G CK   +D+A ++L+S  + G  P   +Y+ LIDG F+    + 
Sbjct: 458 KGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSER 517

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+  + +M    I P    +  +I GL + G+V +    L++  ++G V  +  YN++I 
Sbjct: 518 AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIID 577

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           GF   G +D A     E+ +    P+  T+T LI G+C++  +  A ++ + M+  G   
Sbjct: 578 GFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKL 637

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
            V  ++ALIDG CK  ++E A+  F ++ +IG  P                    T+V  
Sbjct: 638 DVVAYSALIDGFCKMHDMESASKFFTELLDIGLTP-------------------NTVVYN 678

Query: 471 YCTAGLIH----KAYKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLK 525
              +G IH    +A   L Q      +P D+  Y S+I G  K G ++ AL L+ E+  K
Sbjct: 679 SMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSK 738

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            + PD V Y  LINGL    + E+A +I  +M  N  TPS  VY  L+  + R      A
Sbjct: 739 DIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEA 798

Query: 586 FSLWLQYL 593
           F L  + L
Sbjct: 799 FRLHDEML 806



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 238/501 (47%), Gaps = 47/501 (9%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           +L  Q  DE+  G V     +F VLI+G  KVGD EKA E + +MK    QP+V+I N++
Sbjct: 342 NLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSL 401

Query: 140 LNIAFRKQLFLLALAVYYE----------------------------------MVKLNCL 165
           L     + L   A  ++ E                                  MV     
Sbjct: 402 LEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGIT 461

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++V+++ LI G  K G  + A  ML  + +RG+ PN  TYT++I G  +   ++ A+ +
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M  +  +P    +N ++NG  K  RV E    L +F K GFV    +Y+ +IDG F+
Sbjct: 522 FEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               D A   YR+M E  I PDV+ Y  +I GL ++ K+  A+++ SDM+ +G+  D   
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ALI GFC +  ++ A     E+      PNT  +  +I G      ++ A  L  +M 
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K      + ++ ++I GL K G+L  A  L+ +M           LS+  + V D     
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEM-----------LSK--DIVPDIVMYT 748

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++      G +  A KIL ++  +   P ++ YN LI G  + GN+  A +L  E+  K
Sbjct: 749 VLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDK 808

Query: 526 GLRPDSVTYGTLINGLQRVDR 546
           GL PD  TY  L+NG  +V  
Sbjct: 809 GLVPDDTTYDILVNGKLKVSH 829



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 277/631 (43%), Gaps = 83/631 (13%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF  L+  + +V     A+E F  M E D  P V I N +L    R+ +   A  +Y 
Sbjct: 150 SRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYD 209

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTE-------------------------------- 185
           EMV+     +  T  +++    K GK E                                
Sbjct: 210 EMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRL 269

Query: 186 ---VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
              +A ++L EM + G +P+K TYT VI    +     EA RL  +M   G   + +   
Sbjct: 270 DLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTR 329

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM--- 299
           +L+ G+C L  V+ AL L     + G VP +  +S LI+G  +    ++AY  Y +M   
Sbjct: 330 SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM 389

Query: 300 ----------------------------FEEKIE---PDVVLYGVMIRGLSEAGKVKDAM 328
                                       F+E +E    +VV Y ++++ L E GKV +A 
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEAC 449

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L   M  +GI P    YN LI G C  G +D+A S+   I +R   PN  T+T+LI G 
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
            + G  + A  +F +M  A   P+   FN +I+GL K G + +               L 
Sbjct: 510 FKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ-----------DKLN 558

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             + QG   V    +  ++++ +   G +  A     ++ ESG  PD+ITY SLI+G CK
Sbjct: 559 NFIKQG--FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCK 616

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              I  AL++  +++ KG++ D V Y  LI+G  ++   E A + F ++   G TP+  V
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVV 676

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMD 627
           Y S+++          A +L  + +++    D +   SI    L++G++  A+    EM 
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            K     +  YT+ + GL  +GQ++ A  I 
Sbjct: 737 SKDIVPDIVMYTVLINGLSNNGQLENASKIL 767



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 99/187 (52%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I    K +  +   +   EL    ++  + V+  +ISG+  + + E AL    +M +
Sbjct: 643 SALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D+ +Y +++    ++    LAL +Y EM+  + +P+IV +++LINGLS +G+ E 
Sbjct: 703 NKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLEN 762

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+L EM    I P+   Y I+I+G  +     EA+RL  +M D G  PD   Y+ L+N
Sbjct: 763 ASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822

Query: 247 GFCKLRR 253
           G  K+  
Sbjct: 823 GKLKVSH 829



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 55/118 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  LLK     L      E+ S ++     ++ VLI+G    G  E A +   +M  
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +  P V +YN ++   FR+     A  ++ EM+    +P+  T+ +L+NG  K   T
Sbjct: 773 NNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 262/542 (48%), Gaps = 53/542 (9%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L +F +M      P +   N VL     +  +    +VY EM++L   P+IVT++ L++ 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 178 LSKSGKTEVAIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
             + G+ + A K+L EM  R  G LP+  TY +VI+GL +    ++A +L  +M+ S  +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
             F  +N L+ G+     V++A AL    E +G VP + +Y+ +I G+FR+   + A   
Sbjct: 301 SAFT-FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M    + PD++ Y  +I G  +AG +K+A+ L  D++  G+ P    YN L+ G+C 
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICG--------MCRN---------------- 391
           LG L++AR  + E+ ++   P+  T+TIL+ G        M R                 
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 392 -----------GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
                      G   +A +L   M   G       +N  +DGLCK+G L+ A +L+ KM 
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             G  P              D  +   ++  +C  G + +A  I   +  SG  P  +TY
Sbjct: 540 SDGLQP--------------DCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTY 585

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
              I+ +C+ GN+  A   F+++  +G+RP+ VTY  LI+ L R+ R   A++ F +M +
Sbjct: 586 TVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G +P+   Y  L+  +C+   +  A  L+ +  +     D  +  ++ +   +G+ ++A
Sbjct: 646 RGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHA 705

Query: 620 IQ 621
           IQ
Sbjct: 706 IQ 707



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 217/456 (47%), Gaps = 18/456 (3%)

Query: 88  ELRSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           E R G   + SDV + V+I+G  + G+ EKA +   +M+    +   + +N ++   F +
Sbjct: 258 EARPGGC-LPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFAR 315

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A A+  EM     +P +VT++ +I+G+ +SG  E A     EM   G+LP+  TY
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITY 375

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             +I+G C+     EA  LF  +K +G +P  + YN LL+G+C+L  ++EA    +   +
Sbjct: 376 NSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE 435

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P + +Y+ L++G  + +       ++ +M  + ++PD   Y   I      G   +
Sbjct: 436 QGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSE 495

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A +L   M  RGI  DT  YN  + G C  G L  A  L +++      P+  T+T LI 
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
             C  G + +A+ +F+ M  +G  PS   +   I   C+ G L  A   F KM E G  P
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP 615

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         ++ +   ++   C  G  + AY+   ++ E G  P+  TY  LI+G
Sbjct: 616 --------------NEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDG 661

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            CK GN   A++L+ E+   G+ PD  T+  L  G 
Sbjct: 662 NCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 232/514 (45%), Gaps = 21/514 (4%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L LA + EM      P I   +L++  L    + +    +  EM Q GI P+  TY  ++
Sbjct: 179 LCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLL 238

Query: 211 SGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
               +  R D+A +L  +M  +  GC P  V YN ++NG  +   +++A  L+       
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK 298

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                 +++ LI G F     ++A A   +M  E I P VV Y  +I G+  +G V+ A 
Sbjct: 299 KASAF-TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAAR 357

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
               +MR  G++PD   YN+LI G+C  G L +A  L  ++ +    P+  T+ IL+ G 
Sbjct: 358 MKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGY 417

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           CR G +++A++   +M + GC P V  +  L++G  K   L      F +M   G  P  
Sbjct: 418 CRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDC 477

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F              +  T +      G   +A+++   +   G   D +TYN  ++G C
Sbjct: 478 F--------------AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN+  A  L+ ++   GL+PD +TY  LI+      R  +A  IF  M  +G  PS  
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLE 625
            Y   +   CRR     A+  W Q + +   R +E   +  I    + G    A Q   E
Sbjct: 584 TYTVFIHAYCRRGNLYSAYG-WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHE 642

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           M  +        YT+ + G C++G  +EA+ ++S
Sbjct: 643 MLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYS 676



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 230/527 (43%), Gaps = 27/527 (5%)

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M   G  P     N +L       R D+  ++     + G  P + +Y+ L+D  FR
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 286 AKRYDEAYAWYRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             R D+A    R+M        P  V Y V+I GL+  G+++ A +L+  MR        
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SA 302

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           + +N LI G+   G +++A +LQ+E+     +P   T+  +I GM R+G V+ A+  F +
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           M   G  P +  +N+LI+G CKAG L++A  LF  ++  G  P++               
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVL-------------- 408

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++ YC  G + +A +   ++ E G  PD+ TY  L+NG  KV N+    + F E+
Sbjct: 409 TYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEM 468

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KGL+PD   Y T I+    +    +AF++   M   G +     Y   +   C+    
Sbjct: 469 LSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNL 528

Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG---EVENAIQGLLEMDFKLNDFQLAPY 638
             A+ LW++ + D    D  +    I    ++G   E  +   G+L      +      Y
Sbjct: 529 KDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVT---Y 585

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           T+++   C+ G +  A   F  ++E        +   LIH LC+ G  +LA   F   L+
Sbjct: 586 TVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G  L P    Y L      K+     A  L   M   G   D C +
Sbjct: 646 RG--LSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTH 690



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 1/249 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ S  +      +   IS    +G   +A +    M       D   YN  L+   +
Sbjct: 465 FDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCK 524

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A  ++ +MV     P+ +T++ LI+   + G+   A  + D M   G+ P+  T
Sbjct: 525 SGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVT 584

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT+ I   C+      AY  F KM + G  P+ V YN L++  C++ R + A        
Sbjct: 585 YTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEML 644

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +Y+ LIDG  +   ++EA   Y +M +  I PD   +  + +G  E G+ K
Sbjct: 645 ERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDE-GQSK 703

Query: 326 DAMKLLSDM 334
            A++ + ++
Sbjct: 704 HAIQYMENV 712



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N+ + + L+  +  + + Q  + + S  +S  +  + + + G  K G+ + A   + 
Sbjct: 478 FAYNTRISAELILGSTSEAF-QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWM 536

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM     QPD   Y  +++    +     A  ++  M+     P+ VT+++ I+   + G
Sbjct: 537 KMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRG 596

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A     +M + G+ PN+ TY ++I  LC++ R + AY+ F +M + G SP+   Y 
Sbjct: 597 NLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYT 656

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++G CK    +EA+ L     + G  P      C  + LF  K +DE  + +   + E
Sbjct: 657 LLIDGNCKEGNWEEAIRLYSEMHQHGIHPD----HCTHNALF--KGFDEGQSKHAIQYME 710

Query: 303 KI 304
            +
Sbjct: 711 NV 712


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 269/554 (48%), Gaps = 57/554 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+GY K G   +       M++ D +PD Y Y  +++   R  L   A  V  +M++  
Sbjct: 213 LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKG 272

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P +VT++ L+ GL + G  + A+++   M QRG+ PN+  Y  ++ GL ++     A 
Sbjct: 273 IEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRAL 332

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L+  +   G +    A+N ++NG CK+  +D A    +  E+ G  P   +Y  L DG 
Sbjct: 333 TLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGY 392

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +    +EA+    KM +E+I P + +Y  +I GL  + K+   + LL++M  RG+ P+ 
Sbjct: 393 CKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNV 452

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y ALI G+CD G LD+A S   E+  +   PN    + ++  + R G +D+A  L  K
Sbjct: 453 VTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 512

Query: 404 M--------------------EKAGCF---------------PSVGMFNALIDGLCKAGE 428
           M                     K  C+               P+  ++N  + GLCK+G+
Sbjct: 513 MVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGK 572

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +  A               FL LS  G+   D  +  T++  +  AG +++A+ +  ++ 
Sbjct: 573 VNDAR------------RFFLGLSH-GSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G +P+I TYN+L+NG CK G ++ A +LF +L LKGL P+ VTY  LI+G  +     
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-DESM--- 604
           +A  + G+M + G +PS   Y SL+   C++     A  L    L ++   + D+++   
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKL----LNEMKASNVDQTIATF 735

Query: 605 -KSIEEFLQKGEVE 617
            K +E  +Q G+V+
Sbjct: 736 SKLVEGCIQHGDVK 749



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 169/649 (26%), Positives = 296/649 (45%), Gaps = 58/649 (8%)

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           Y + G  + AL  F  M ++  +P +   N++L+   ++     A+ VY +M +L+ +P+
Sbjct: 6   YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + T ++++N   K+GK E A++ + EM + G   N  +Y  ++ G   +   + A  +  
Sbjct: 66  VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-DGFVPRLGSYSCLIDGLFRA 286
            M + G   + V    L+ G+CK  +V+EA  +LR  EK DG V    +Y  LIDG  + 
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            +  +A     +M +  ++ ++ +   +I G  + G+V +  +LL  MR+  + PD+Y Y
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY 245

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             L+ G+C  GL  +A ++  ++ ++   P   T+  L+ G+CR G   DA +L++ M +
Sbjct: 246 CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ 305

Query: 407 AGCFP-----------------------------------SVGMFNALIDGLCKAGELEK 431
            G  P                                   S+  FN +I+GLCK GE++ 
Sbjct: 306 RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDG 365

Query: 432 ANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A   F +M E+G  P              D  + +T+ + YC  G + +A+KI  ++ + 
Sbjct: 366 AKETFKRMEELGCKP--------------DGITYRTLSDGYCKVGNVEEAFKIKEKMEKE 411

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P I  YNSLI G      I+  + L  E+  +GL P+ VTYG LI G     R + A
Sbjct: 412 EIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKA 471

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           F  + +M   G  P+  +   +++   R  +   A ++ LQ + D     D   + +E+F
Sbjct: 472 FSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA-NMLLQKMVDFDLVLDH--RCLEDF 528

Query: 611 ----LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
               ++K +       L E   K +      Y I + GLC+ G+V +A   F  L     
Sbjct: 529 QNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSF 588

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
                +   LIHG    GY++ A ++    +  G +      N LL  L
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGL 637



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 187/743 (25%), Positives = 312/743 (41%), Gaps = 139/743 (18%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VL 104
               F    K  R  S  S ++++S L+K           D++R   + +V DVF   ++
Sbjct: 15  ALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMR--RLDIVPDVFTCAIM 72

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           ++ Y K G  E+A+E   +M++   + +   YN++++          A  V   M +   
Sbjct: 73  VNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGV 132

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAY 223
           + N VT +LLI G  K  K E A K+L EM +  G++ +++ Y  +I G C++ +  +A 
Sbjct: 133 MRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAI 192

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           R+  +M   G   +    N+L+NG+CK  +V E   LL    K    P   SY  L+DG 
Sbjct: 193 RVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGY 252

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R     +A+    +M  + IEP VV Y  +++GL   G  KDA++L   M +RG+ P+ 
Sbjct: 253 CRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNE 312

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  L+ G   +G   +A +L  +I  R    + + F  +I G+C+ G +D A++ F +
Sbjct: 313 VGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKR 372

Query: 404 MEKAGC-----------------------------------FPSVGMFNALIDGL----- 423
           ME+ GC                                   FPS+ M+N+LI GL     
Sbjct: 373 MEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKK 432

Query: 424 ------------------------------CKAGELEKANLLFYKMEIGKN--PTLFL-- 449
                                         C  G L+KA   +++M IGK   P + +  
Sbjct: 433 ISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM-IGKGFAPNVIICS 491

Query: 450 ----------RLSQGGNRVHDKASLQTMVEQYCTAGL----IHK--AYKILMQLAESG-- 491
                     R+ +    +        +++  C        I K   +KI   L ES   
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551

Query: 492 -NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            +LP+ + YN  + G CK G +N A + F  L      PD+ TY TLI+G        +A
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           F +  +M   G  P+   Y +L+   C+                  SG  D + +  ++ 
Sbjct: 612 FNLRDEMVNKGLVPNITTYNALLNGLCK------------------SGYLDRARRLFDKL 653

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE---CKAI 667
             KG + N +                 Y I + G C+ G  +EAL++   +++     +I
Sbjct: 654 HLKGLIPNVV----------------TYNILIDGYCKSGSPREALDLRGKMLKEGISPSI 697

Query: 668 VTPPSCVKLIHGLCKRGYLDLAM 690
           +T  S   LI+G CK+  ++ AM
Sbjct: 698 ITYSS---LINGFCKQSDVEEAM 717



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 238/509 (46%), Gaps = 50/509 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY + G   KA     +M     +P V  YN +L    R   +  AL +++ M+
Sbjct: 245 YCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML 304

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    PN V +  L++GL K G    A+ + D++  RGI  + + +  +I+GLC++   D
Sbjct: 305 QRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMD 364

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A   F +M++ GC PD + Y  L +G+CK+  V+EA  +    EK+   P +  Y+ LI
Sbjct: 365 GAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLI 424

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLF +K+  +      +M    + P+VV YG +I G  + G++  A     +M  +G  
Sbjct: 425 VGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFA 484

Query: 341 PDTYCYNALIKGFCDLGLLDQARSL-------------------------QVEIWK---- 371
           P+    + ++     LG +D+A  L                         +++ WK    
Sbjct: 485 PNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADT 544

Query: 372 ------RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
                 + SLPN   + I + G+C++G V+DA++ F  +      P    +  LI G   
Sbjct: 545 LDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSA 604

Query: 426 AGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           AG + +A NL    +  G  P +               +   ++   C +G + +A ++ 
Sbjct: 605 AGYVNEAFNLRDEMVNKGLVPNI--------------TTYNALLNGLCKSGYLDRARRLF 650

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            +L   G +P+++TYN LI+G+CK G+   AL L  ++  +G+ P  +TY +LING  + 
Sbjct: 651 DKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQ 710

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
              E+A ++  +M  +    + A +  L+
Sbjct: 711 SDVEEAMKLLNEMKASNVDQTIATFSKLV 739



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 222/456 (48%), Gaps = 21/456 (4%)

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           L K   F       D++ +  ++     F  +I+G  K+G+ + A E+F +M+E  C+PD
Sbjct: 322 LFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPD 381

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
              Y  + +   +      A  +  +M K    P+I  ++ LI GL  S K    I +L 
Sbjct: 382 GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA 441

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM  RG+ PN  TY  +I+G C   R D+A+  + +M   G +P+ +  + +++   +L 
Sbjct: 442 EMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLG 501

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE---PDVV 309
           R+DEA  LL+       V     + CL D      R  + +     + E  I+   P+ V
Sbjct: 502 RIDEANMLLQKMVDFDLVL---DHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNV 558

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y + + GL ++GKV DA +    +      PD + Y  LI GF   G +++A +L+ E+
Sbjct: 559 VYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEM 618

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +  +PN  T+  L+ G+C++G +D A++LF+K+   G  P+V  +N LIDG CK+G  
Sbjct: 619 VNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSP 678

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            +A  L  KM + G +P++               +  +++  +C    + +A K+L ++ 
Sbjct: 679 REALDLRGKMLKEGISPSII--------------TYSSLINGFCKQSDVEEAMKLLNEMK 724

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            S     I T++ L+ G  + G++    KL   + +
Sbjct: 725 ASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHM 760



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 218/460 (47%), Gaps = 22/460 (4%)

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           +S  + + +I+ L K    D   +T   +           +  L  GY KVG+ E+A + 
Sbjct: 345 KSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKI 404

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             KM++ +  P + +YN+++   F  +     + +  EM      PN+VT+  LI G   
Sbjct: 405 KEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCD 464

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+ + A     EM  +G  PN    + ++S L ++ R DEA  L  KM D     D V 
Sbjct: 465 QGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF----DLVL 520

Query: 241 YNALLNGF--CKLRRVDEALALLRSFEKDGF---VPRLGSYSCLIDGLFRAKRYDEAYAW 295
            +  L  F    +R++D    +  + ++      +P    Y+  + GL ++ + ++A  +
Sbjct: 521 DHRCLEDFQNADIRKLD-CWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRF 579

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +  +      PD   Y  +I G S AG V +A  L  +M  +G+VP+   YNAL+ G C 
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCK 639

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G LD+AR L  ++  +  +PN  T+ ILI G C++G   +A  L  KM K G  PS+  
Sbjct: 640 SGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIIT 699

Query: 416 FNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---GNRVHDKASLQTMVE 469
           +++LI+G CK  ++E+A  L  +M+   + +    F +L +G      V   + L  M+ 
Sbjct: 700 YSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759

Query: 470 QYC-TAGLI-HKAYKILMQLAESGNLPDIITYNSLINGFC 507
             C +AG+  HK     M+L+E  N  +++   ++    C
Sbjct: 760 MACPSAGITSHKQ----MELSELSNAKEMLDSYTISEAAC 795


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 227/434 (52%), Gaps = 16/434 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  ++ VL+   + + + L +++++ M       ++ +++++IN L +  +  +A+ +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           + +M + G  P+  T + +I+G CQ NR  +A  L  KM++ G  PD V YN +++G CK
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           +  V++A+ L    E+DG      +Y+ L+ GL  + R+ +A    R M    I P+V+ 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           +  +I    + GK  +AMKL  +M  R + PD + YN+LI G C  G +D+A+ +   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +  LP+  T+  LI G C++  VD+  KLF +M + G       +N +I G  +AG  +
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  +F +M+   N   +  L  G                 C    + KA  +   + +S
Sbjct: 308 AAQEIFSRMDSRPNIRTYSILLYG----------------LCMNWRVEKALVLFENMQKS 351

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
               DI TYN +I+G CK+GN+  A  LF+ L  KGL+PD V+Y T+I+G  R  + + +
Sbjct: 352 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 411

Query: 551 FRIFGQMPQNGCTP 564
             ++ +M ++G  P
Sbjct: 412 DLLYRKMQEDGLLP 425



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 217/429 (50%), Gaps = 16/429 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  ++S   K  + +  +  F  M+      D+Y YN V+N   R   F++AL+V  +M+
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P++VT S LING  +  +   AI ++ +M + G  P+   Y  +I G C+I   +
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  LF +M+  G   D V YN+L+ G C   R  +A  L+R       VP + +++ +I
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  ++ EA   Y +M    ++PDV  Y  +I GL   G+V +A ++L  M  +G +
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN LI GFC    +D+   L  E+ +R  + +T T+  +I G  + G  D AQ++
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F++M+     P++  ++ L+ GLC    +EKA +LF  M             Q      D
Sbjct: 313 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM-------------QKSEIELD 356

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   ++   C  G +  A+ +   L+  G  PD+++Y ++I+GFC+    + +  L++
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 521 ELQLKGLRP 529
           ++Q  GL P
Sbjct: 417 KMQEDGLLP 425



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 208/456 (45%), Gaps = 58/456 (12%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P  V ++ +L+   K +  D  ++L    E  G    L SY+ +I+ L R  R+  A + 
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             KM +   EPDVV    +I G  +  +V DA+ L+S M E G  PD   YN +I G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +GL++ A  L   + +     +  T+  L+ G+C +G   DA +L   M      P+V  
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F A+ID   K G+  +A  L+ +M     +P +F              +  +++   C  
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF--------------TYNSLINGLCMH 233

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A ++L  +   G LPD++TYN+LINGFCK   ++   KLF+E+  +GL  D++TY
Sbjct: 234 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 293

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            T+I G  +  R + A  IF +M      P+   Y  L+   C   +   A  L+     
Sbjct: 294 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF----- 345

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                         E +QK E+E                 +  Y I + G+C+ G V++A
Sbjct: 346 --------------ENMQKSEIE---------------LDITTYNIVIHGMCKIGNVEDA 376

Query: 655 LNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLD 687
            ++F  L  CK +   P  V    +I G C++   D
Sbjct: 377 WDLFRSL-SCKGL--KPDVVSYTTMISGFCRKRQWD 409



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 166/312 (53%), Gaps = 3/312 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I G  K+G    A+E F +M+    + D   YN+++        +  A  +  +M
Sbjct: 117 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 176

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  + +PN++TF+ +I+   K GK   A+K+ +EMT+R + P+ FTY  +I+GLC   R 
Sbjct: 177 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 236

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++   M   GC PD V YN L+NGFCK +RVDE   L R   + G V    +Y+ +
Sbjct: 237 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G F+A R D A   + +M      P++  Y +++ GL    +V+ A+ L  +M++  I
Sbjct: 297 IQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 353

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YN +I G C +G ++ A  L   +  +   P+  ++T +I G CR    D +  
Sbjct: 354 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDL 413

Query: 400 LFNKMEKAGCFP 411
           L+ KM++ G  P
Sbjct: 414 LYRKMQEDGLLP 425



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 19/413 (4%)

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M + +  P +V +  ++  ++++      + L   M   GI  D Y YN +I   C    
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
              A S+  ++ K    P+  T + LI G C+   V DA  L +KME+ G  P V ++N 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +IDG CK G +  A  LF +ME            + G R  D  +  ++V   C +G   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRME------------RDGVRA-DAVTYNSLVAGLCCSGRWS 167

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A +++  +     +P++IT+ ++I+ F K G  + A+KL++E+  + + PD  TY +LI
Sbjct: 168 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 227

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDIS 597
           NGL    R ++A ++   M   GC P    Y +L+   C+ ++      L+ +   R + 
Sbjct: 228 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G        I+ + Q G  + A +    MD + N   +  Y+I L GLC + +V++AL +
Sbjct: 288 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN---IRTYSILLYGLCMNWRVEKALVL 344

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           F  + + +  +   +   +IHG+CK G ++ A D+F      G  L+P V +Y
Sbjct: 345 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG--LKPDVVSY 395



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 3/293 (1%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  D +    V   +  +  L++G    G    A      M   D  P+V  + AV+++ 
Sbjct: 136 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 195

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++  F  A+ +Y EM +    P++ T++ LINGL   G+ + A +MLD M  +G LP+ 
Sbjct: 196 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I+G C+  R DE  +LF +M   G   D + YN ++ G+ +  R D A  +   
Sbjct: 256 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI--- 312

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
           F +    P + +YS L+ GL    R ++A   +  M + +IE D+  Y ++I G+ + G 
Sbjct: 313 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           V+DA  L   +  +G+ PD   Y  +I GFC     D++  L  ++ +   LP
Sbjct: 373 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 169/675 (25%), Positives = 301/675 (44%), Gaps = 52/675 (7%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           AK K L   AS     S+L      D+ W   +E++            +LI G  +    
Sbjct: 194 AKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKL 253

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E A+ SF         P +   N +++   +  L  +A + +  MVK   L +  ++++L
Sbjct: 254 EDAI-SFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNIL 312

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++GL  +G  + A+   D+M + G+ P+  TY  +  G   +     A ++  KM   G 
Sbjct: 313 LHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGL 372

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           +PD V Y  L+ G C++  ++EAL L +     GF   +  Y+ L+  L +  R +EA  
Sbjct: 373 NPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALT 432

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M   ++EPD ++Y ++I GL + G V+ A +L   MR +   P  +   A++ G  
Sbjct: 433 LFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLF 492

Query: 355 DLGLLDQARSLQVEIWKR-DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             G + +AR+   + W R D + +   + I+I G  R   + +A +L+ KM + G  PSV
Sbjct: 493 KNGNISEARNY-FDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSV 551

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             FN LI+G C+ G+L +A  +   + + G  P++               +  T++  YC
Sbjct: 552 VTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSV--------------VTYTTLMNAYC 597

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + + +  L ++  +  +P  +TY  LI G C+   ++ +L+L + +  KGL PDSV
Sbjct: 598 EVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSV 657

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY T+I    +      A +++  M  + C P+   YK L+   C               
Sbjct: 658 TYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALC-----------IFGD 706

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           L+D+    D  + SIE+                   +    +   Y   +   C  GQV 
Sbjct: 707 LKDV----DRMVVSIED-------------------RNITLKKXTYMTIIKAHCAKGQVS 743

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           +AL  F+ ++    +++      +I+ LCKRG +  A   F+  L  G    P +C  +L
Sbjct: 744 KALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVL 803

Query: 713 RSLLFSKDNKKVHAY 727
            +     +N  V  +
Sbjct: 804 NAFHQQGNNSSVFEF 818


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 270/569 (47%), Gaps = 26/569 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  ++SGY + G    A      +      P+ Y Y  V+     +     AL+V  EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEV---AIKMLDEMTQRGILPNKFTYTIVISGLC-QI 216
           +  C P    + +++      G       A+++L ++  RG   +     +V++ +C Q 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 217 NRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
              DEA RL   +  S GC PD V+YNA+L G C  +R      L+    + G  P + +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ LI  L R   ++  +    +M +    PD+ +Y  ++ G+ + G ++ A ++L  M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G+ P+  CYN ++KG C     +QA  L  E++  D   +  TF IL+   C+NG+V 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQG 454
              +L  +M + GC P V  +  +I+G CK G +++A +L   M   G  P         
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRP--------- 433

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  S   +++  C+A     A  ++ Q+ E G  P+ +T+N++IN  CK G +  
Sbjct: 434 -----NTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A++L K++ L G  PD ++Y T+I+GL +  + ++A  +   M   G +P+  +Y S+ +
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              +  + +    ++   ++D++ R D  + +  I    ++G  + AI+ L  M      
Sbjct: 549 ALSKEGRINRVIQMF-DNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCM 607

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
              + YTI + GL  +G VKEA  + + L
Sbjct: 608 PNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 252/559 (45%), Gaps = 60/559 (10%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD---EA 222
           PN  T+  ++  L   G+   A+ +LDEM +RG  P    Y +++   C          A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFC-KLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            R+   +   GC+ D    N +LN  C +   VDEAL LLR            S+ C   
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPT--------SFGC--- 221

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
                                  +PDVV Y  +++GL  A +      L+ +M   G  P
Sbjct: 222 -----------------------DPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPP 258

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   +N LI   C  GL ++   +  ++      P+   +  ++ G+C+ G ++ A ++ 
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL 318

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           ++M   G  P+V  +N ++ GLC A   E+A  L  +M     P              D 
Sbjct: 319 DRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL-------------DD 365

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +V+ +C  GL+++  ++L Q+ E G +PD+ITY ++INGFCK G I+ A+ L K 
Sbjct: 366 VTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS 425

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   G RP++++Y  ++ GL   +R  DA  +  QM + GC+P+P  + +++ + C++  
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTI 640
              A  L  Q L +    D  S  ++ + L K G+ + A++ L  M  K        Y+ 
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545

Query: 641 WLIGLCQDGQVKEAL----NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
               L ++G++   +    NI  V +   A++       +I  LCKRG  D A++   Y 
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYN----AVISSLCKRGGTDRAIEFLAYM 601

Query: 697 LKNGFILRPRVCNYLLRSL 715
           + +G +        L+R L
Sbjct: 602 VSSGCMPNESTYTILIRGL 620



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 194/404 (48%), Gaps = 13/404 (3%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M    C P+V  +N ++    R  LF     V  +MV   C P+I  ++ +++G+ K G
Sbjct: 250 EMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEG 309

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             EVA ++LD M   G+ PN   Y  V+ GLC   R ++A  L  +M D+ C  D V +N
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++ FC+   V   + LL    + G VP + +Y+ +I+G  +    DEA    + M   
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+ + Y ++++GL  A +  DA  L+S M E+G  P+   +N +I   C  GL++QA
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L  ++      P+  +++ +I G+ + G  D+A +L N M   G  P+  +++++   
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           L K G + +   +F  ++      + +R         D      ++   C  G   +A +
Sbjct: 550 LSKEGRINRVIQMFDNIQ-----DVTIR--------SDAVLYNAVISSLCKRGGTDRAIE 596

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
            L  +  SG +P+  TY  LI G    G +  A ++  EL  KG
Sbjct: 597 FLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 175/342 (51%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + V+  + K    ++  + LD + S  +      +  ++ G       E+A E   +M +
Sbjct: 299 ATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD 358

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M++  C+P+++T++ +ING  K G  + 
Sbjct: 359 NDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDE 418

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M   G  PN  +YTIV+ GLC   R  +A  L  +M + GCSP+ V +N ++N
Sbjct: 419 AVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVIN 478

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + DEA      M  + + P
Sbjct: 479 FLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSP 538

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS+ G++   +++  ++++  I  D   YNA+I   C  G  D+A    
Sbjct: 539 NTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFL 598

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+TILI G+   G V +AQ++  ++   G
Sbjct: 599 AYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 4/297 (1%)

Query: 83  WQTLDELRS---GNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           W+  +EL +    N   + DV F +L+  + + G   + +E   +M E  C PDV  Y  
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTT 405

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           V+N   ++ L   A+ +   M    C PN +++++++ GL  + +   A  ++ +M ++G
Sbjct: 406 VINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQG 465

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN  T+  VI+ LC+    ++A  L  +M  +GCSPD ++Y+ +++G  K  + DEAL
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL      G  P    YS +   L +  R +     +  + +  I  D VLY  +I  L
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            + G    A++ L+ M   G +P+   Y  LI+G    G + +A+ +  E+  + +L
Sbjct: 586 CKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 205/504 (40%), Gaps = 73/504 (14%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR L  AG+  +A + LS    RG       YNA++ G+C  G L  AR L   +    
Sbjct: 55  LIRSLCAAGRTAEAARALSAAAARGGAGVVA-YNAMVSGYCRAGQLASARRLAASV---P 110

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC--------- 424
             PN +T+  ++  +C  G + DA  + ++M + GC P   M++ +++  C         
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170

Query: 425 ------------------------------KAGELEKANLLFYKM--EIGKNPTLF---- 448
                                         + G +++A  L   +    G +P +     
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230

Query: 449 ----LRLSQGGNRVHDKASLQTMVEQYCTAGLI---------------HKAYKILMQLAE 489
               L +++   RV D   ++ MV   C   ++                + +++L Q+ +
Sbjct: 231 VLKGLCMAKRWGRVQDL--MEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PDI  Y ++++G CK G++  A ++   +   GL+P+ V Y T++ GL   +R E 
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IE 608
           A  +  +M  N C      +  L+ + C+         L  Q L      D  +  + I 
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F ++G ++ A+  L  M           YTI L GLC   +  +A ++ S ++E     
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
            P +   +I+ LCK+G ++ A+++    L NG    P + +Y        K  K   A  
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNG--CSPDLISYSTVIDGLGKAGKTDEALE 526

Query: 729 LLCRMKSVGYDLDACLYPKTKSLL 752
           LL  M + G   +  +Y    S L
Sbjct: 527 LLNVMVNKGMSPNTIIYSSIASAL 550



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    D   + L+ + +  +S  + ++  + S   K G   + ++ F  +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+     MV   C+PN  T+++LI GL+  G  
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFV 626

Query: 185 EVAIKMLDEMTQRGILPNKF 204
           + A +ML E+  +G L   F
Sbjct: 627 KEAQEMLTELCSKGALRKHF 646



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 75/381 (19%), Positives = 140/381 (36%), Gaps = 61/381 (16%)

Query: 416 FNALIDGL----------------------------------CKAGELEKANLLFYKMEI 441
            +ALI  L                                  C+AG+L  A  L   + +
Sbjct: 52  LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPV 111

Query: 442 GKNPTLF---LRLSQGGNRVHDKASL----------------QTMVEQYCT---AGLIHK 479
             N   +   +R      R+ D  S+                  ++E  C+    G    
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRS 171

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFC-KVGNINGALKLFKELQLK-GLRPDSVTYGTL 537
           A ++L  L   G   D+   N ++N  C + G+++ AL+L ++L    G  PD V+Y  +
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           + GL    R      +  +M + GC P+   + +L+ + CR   F     +  Q +    
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291

Query: 598 GRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             D     ++ +   ++G +E A + L  M        +  Y   L GLC   + ++A  
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           + + + +    +   +   L+   C+ G +   +++    L++G +  P V  Y      
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV--PDVITYTTVING 409

Query: 717 FSKDNKKVHAYHLLCRMKSVG 737
           F K+     A  LL  M + G
Sbjct: 410 FCKEGLIDEAVMLLKSMAACG 430


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 15/496 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L  +R   V   +    +L     +VGD     + F  +     QP  Y ++ ++   
Sbjct: 7   EILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGF 66

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            RK    L  ++ + M K +C PN   ++++IN     G+T  A+   + M +RG  P  
Sbjct: 67  CRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTV 126

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  VI+  C+     EA +LF  +K+ G SP+ + YN L+NG+ K+R +D+A  L   
Sbjct: 127 VTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEE 186

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             K G  P   +++ L+ G ++  R ++     + +    + PD  L+ + + GL  AG+
Sbjct: 187 MRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGR 246

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + +AM+ L DM E+G+ P    +N++I  +   GL D+A      +      P+  T + 
Sbjct: 247 LDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSS 306

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IG 442
           L+ G+  NG + +A +L  +M + G   +   F  L+D   K G++  A  L+ +ME  G
Sbjct: 307 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 366

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P              D  +    ++     GL+ +AY + +++   G +P+   YNSL
Sbjct: 367 IFP--------------DVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I GFCK G +N ALKL K ++ +GL PD  T   +I GL +  R   A  +F  M Q G 
Sbjct: 413 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 472

Query: 563 TPSPAVYKSLMTWSCR 578
           +P    Y +L+   C+
Sbjct: 473 SPDIITYNTLINGYCK 488



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 233/468 (49%), Gaps = 18/468 (3%)

Query: 62  SFASNSAVISMLLKPNGFD-LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           +FA N  + +  ++    D L W  L   R  N +VV+  F  +I+ + K G+  +A + 
Sbjct: 91  AFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVT--FNTVINAFCKEGNVVEARKL 148

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F  +KE    P+  +YN ++N   + +    A  +Y EM K    P+ +TF++L++G  K
Sbjct: 149 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 208

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G+ E   ++L +++  G+LP++  + I +SGLC   R DEA    + M + G SP  +A
Sbjct: 209 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 268

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           +N+++  + +    D+A    +     G  P   + S L+ GL    R  EA     +M 
Sbjct: 269 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 328

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E+ +  + + + V++    + G V  A  L  +M  RGI PD   ++A I G    GL++
Sbjct: 329 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 388

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A ++ +E+ ++  +PN   +  LICG C+ G +++A KL   M   G  P +   N +I
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 448

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            GLCK G +  A  +F  M + G +P              D  +  T++  YC A  +  
Sbjct: 449 GGLCKQGRMRSAINVFMDMHQTGLSP--------------DIITYNTLINGYCKAFDMVN 494

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           A  ++ ++  SG+ PD+ TYN  I+GFC    +N A+ +  EL   G+
Sbjct: 495 ADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 228/516 (44%), Gaps = 31/516 (6%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +AL +L    + G  P     + L   L R   Y   +  ++ +     +P    +  +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G    G +     LL  M +    P+ + YN +I   C  G    A +    + +R   
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P   TF  +I   C+ G V +A+KLF+ +++ G  P+  M+N L++G  K  E+++AN+L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 436 FYKME---IGKNPTLFLRLSQG---------GNRV----------HDKASLQTMVEQYCT 473
           + +M    I  +   F  L  G         G+R+           D++     V   C 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           AG + +A + LM + E G  P II +NS+I  + + G  + A + +K +   GL P   T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
             +L+ GL    R ++A  + GQM + G + +   +  L+    +R     A SLW +  
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDG 649
           R     D  +  + I+   ++G VE A    LEM  K    N+F    Y   + G C+ G
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF---AYNSLICGFCKCG 420

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++ EAL +  V+     +    +   +I GLCK+G +  A++VF+   + G  L P +  
Sbjct: 421 KLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG--LSPDIIT 478

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           Y      + K    V+A +L+ RM + G + D   Y
Sbjct: 479 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTY 514



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 120/241 (49%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G    G  ++A E  G+M E     +   +  +L+  F++   + A +++ EM +  
Sbjct: 307 LLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRG 366

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++V FS  I+GLSK G  E A  +  EM ++G++PN F Y  +I G C+  + +EA 
Sbjct: 367 IFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEAL 426

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L   M+  G  PD    N ++ G CK  R+  A+ +     + G  P + +Y+ LI+G 
Sbjct: 427 KLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGY 486

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +A     A     +M+     PD+  Y + I G   + ++  A+ +L ++   GI+  +
Sbjct: 487 CKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFS 546

Query: 344 Y 344
           +
Sbjct: 547 F 547



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ K G   +AL+    M+     PD++  N ++    ++     A+ V+ +M +  
Sbjct: 412 LICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG 471

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+I+T++ LING  K+     A  +++ M   G  P+  TY I I G C   R + A 
Sbjct: 472 LSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAV 531

Query: 224 RLFLKMKDSG-------CSPDFVAY 241
            +  ++  +G       C P   A+
Sbjct: 532 LMLDELVSAGILSFSFACPPTLNAH 556


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 225/446 (50%), Gaps = 53/446 (11%)

Query: 129 CQPDVYIYNA-VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           C+PDV  YNA V       QL     A    +  +   P+  T++ LI GL   G+T  A
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLD----AARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNA 175

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + +LD+M +RG +P+  TYTI++   C+ +   +A +L  +M+  GC+PD + YN ++NG
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+  RVD+A+  L+S    G  P   SY+ ++ GL  A+R+++A     +M ++   P+
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           VV + ++I  L   G V+ AM++L  + + G  P++  YN ++  FC    +D+A +   
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +  R   P+  ++  L+  +CR G VD A +L ++++  GC P +  +N +IDGL KAG
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + ++A                                                 ++L ++
Sbjct: 416 KTKEA------------------------------------------------LELLNEM 427

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDIITY+++ +G C+   I  A++ F ++Q  G+RP++V Y  ++ GL +    
Sbjct: 428 VTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRET 487

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +A  +F  M  NGC P+ + Y  L+
Sbjct: 488 HNAIDLFIYMISNGCMPNESTYTILI 513



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 227/457 (49%), Gaps = 24/457 (5%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI  L  SG+T  A ++L         P+   Y  +++G C   + D A RL   M  
Sbjct: 98  AALIKKLCASGRTAEARRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMP- 151

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               PD   YN L+ G C   R   AL +L    + G VP + +Y+ L++   +   Y +
Sbjct: 152 --MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A     +M  +   PD++ Y V++ G+ + G+V DA++ L  +   G  P+T  YN ++K
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C     + A  L  E+ ++   PN  TF +LI  +CR G+V+ A ++ +++ K GC P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +   +N ++   CK  ++++A               F+ L        D  S  T++   
Sbjct: 330 NSLSYNPILHAFCKQKKMDRA-------------MAFVELMVSRGCYPDIVSYNTLLTAL 376

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G +  A ++L QL + G  P +I+YN++I+G  K G    AL+L  E+  KGL+PD 
Sbjct: 377 CRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDI 436

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TY T+ +GL R DR E+A R F ++   G  P+  +Y +++   C+RR+   A  L++ 
Sbjct: 437 ITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFI- 495

Query: 592 YLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y+       +ES  +  IE    +G V+ A + L E+
Sbjct: 496 YMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 241/549 (43%), Gaps = 73/549 (13%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT--YTIVISGLCQINRAD 220
           N +P+    +  + GL + G  E A+++++ M+  G+ P+        +I  LC   R  
Sbjct: 54  NAVPHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTA 111

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKDGFVPRLGSYSC 278
           EA R+      + C PD +AYNA++ G+C   ++D A  L+     E D +     +Y+ 
Sbjct: 112 EARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSY-----TYNT 161

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL    R   A      M      PDVV Y +++    +    K AMKLL +MR +G
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             PD   YN ++ G C  G +D A      +      PNT ++ I++ G+C     +DA+
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           KL  +M + G  P+V  FN LI  LC+ G +E A  +  ++ + G  P            
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP------------ 329

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  S   ++  +C    + +A   +  +   G  PDI++YN+L+   C+ G ++ A++
Sbjct: 330 --NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVE 387

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L  +L+ KG  P  ++Y T+I+GL +  + ++A  +  +M   G  P    Y ++ +  C
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           R  +                                  +E AI+       K+ D  + P
Sbjct: 448 REDR----------------------------------IEEAIRAFC----KVQDMGIRP 469

Query: 638 YTIW----LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            T+     L+GLC+  +   A+++F  ++    +    +   LI GL   G +  A ++ 
Sbjct: 470 NTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELL 529

Query: 694 LYTLKNGFI 702
                 G +
Sbjct: 530 GELCSRGVV 538



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 191/395 (48%), Gaps = 15/395 (3%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  +  LI G    G    AL     M    C PDV  Y  +L    ++  +  A+ +  
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM    C P+I+T+++++NG+ + G+ + AI+ L  +   G  PN  +Y IV+ GLC   
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R ++A +L  +M   G  P+ V +N L++  C+   V+ A+ +L    K G  P   SY+
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            ++    + K+ D A A+   M      PD+V Y  ++  L   G+V  A++LL  ++++
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P    YN +I G    G   +A  L  E+  +   P+  T++ +  G+CR   +++A
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGN 456
            + F K++  G  P+  ++NA++ GLCK  E   A +L  Y +  G  P           
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMP----------- 504

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
              ++++   ++E     GL+ +A ++L +L   G
Sbjct: 505 ---NESTYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 5/352 (1%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K +G+    + LDE+R+   +     + V+++G  + G  + A+E    +    C+P+  
Sbjct: 203 KRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTV 262

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN VL      + +  A  +  EM +    PN+VTF++LI+ L + G  E A+++LD++
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            + G  PN  +Y  ++   C+  + D A      M   GC PD V+YN LL   C+   V
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D A+ LL   +  G  P L SY+ +IDGL +A +  EA     +M  + ++PD++ Y  +
Sbjct: 383 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTI 442

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
             GL    ++++A++    +++ GI P+T  YNA++ G C       A  L + +     
Sbjct: 443 SSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGC 502

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA----LIDG 422
           +PN  T+TILI G+   G+V +A++L  ++   G   S G+ N     L+DG
Sbjct: 503 MPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV-SKGLINKAAIRLLDG 553



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 4/246 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS L +    +   + LD++     +  S  +  ++  + K    ++A+     M    
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PD+  YN +L    R      A+ + +++    C P +++++ +I+GL+K+GKT+ A+
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L+EM  +G+ P+  TY+ + SGLC+ +R +EA R F K++D G  P+ V YNA+L G 
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK R    A+ L      +G +P   +Y+ LI+GL     Y+      R++  E     V
Sbjct: 482 CKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLT----YEGLVKEARELLGELCSRGV 537

Query: 309 VLYGVM 314
           V  G++
Sbjct: 538 VSKGLI 543



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 30/323 (9%)

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P   + N  + GL + G+LE+A  L   M  G  P+                    +++
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMS-GLEPSAA------------PGPCAALIK 102

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
           + C +G   +A ++L         PD++ YN+++ G+C  G ++ A +L  ++ ++   P
Sbjct: 103 KLCASGRTAEARRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMPME---P 154

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           DS TY TLI GL    R  +A  +   M + GC P    Y  L+  +C+R  +  A  L 
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKL- 213

Query: 590 LQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L  +R      D    ++      Q+G V++AI+ L  +     +     Y I L GLC 
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
             + ++A  + +   E      PP+ V    LI  LC+RG ++ AM+V     K G    
Sbjct: 274 AERWEDAEKLMA---EMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN 330

Query: 705 PRVCNYLLRSLLFSKDNKKVHAY 727
               N +L +    K   +  A+
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAF 353



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 9/239 (3%)

Query: 4   TLNEVLTILDTVTPIEPALEPL--LP-------FLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           T N +++ L     +EPA+E L  +P        LS   +     K K       F    
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
             R       S + +++ L +    D   + L +L+    + V   +  +I G  K G  
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +M     QPD+  Y+ + +   R+     A+  + ++  +   PN V ++ +
Sbjct: 418 KEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI 477

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           + GL K  +T  AI +   M   G +PN+ TYTI+I GL       EA  L  ++   G
Sbjct: 478 LLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 282/636 (44%), Gaps = 74/636 (11%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV+    P+  TF+ LI G  ++ + +VA  + D+M  RG   +  +Y  +I GLC+  R
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA  LF +M      PD   Y AL+ G C   R +E L +LR  ++ G+ P   +Y+ 
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++D   R ++  EA    ++MFE+ + P VV    +I    + G++ DA+++L  M+ RG
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+ + YNAL++GFC+ G + +A +L  ++      P+  T+ +LI G C +G ++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           +L   ME  G       +NALI+ LCK G  ++A  LF  +E  G  P            
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP------------ 284

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  +++   C +G    A+K L ++  +G  PD  TY+S I   CK+      L 
Sbjct: 285 --NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLS 342

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
              E+  K ++P +V Y  +I+ L +        R +G+M  +GC P    Y + M   C
Sbjct: 343 FIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYC 402

Query: 578 RRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGEVENA- 619
              + + A ++ ++  ++                   G+ D ++  +++      V N  
Sbjct: 403 IEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 462

Query: 620 -----IQGLLEMDFKLNDFQLAPYTIW------------------------------LIG 644
                ++ L+ M    +   L P  +W                              L G
Sbjct: 463 TYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEG 522

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK-RGYLDLAMDVFLYTLKNGFIL 703
             +DG+ +EA ++ S++ E    +       L+   CK + YLD A  +    +++GFI 
Sbjct: 523 FSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD-AWVLVCSMIQHGFIP 581

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           +     +LL  L+      K     +  R K    D
Sbjct: 582 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPD 617



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 282/639 (44%), Gaps = 52/639 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY +    + A + F KM       DV  Y  ++           A+ ++ EM
Sbjct: 12  TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++  ++ L+ GL  + + E  + ML  M + G  P+   Y  V+   C+  +A
Sbjct: 72  DQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKA 127

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +  +M + G +P  V   A++N +CK  R+ +AL +L   +  G  P + +Y+ L
Sbjct: 128 KEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNAL 187

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G     +  +A     KM    + PD V Y ++IRG    G ++ A +LL  M   G+
Sbjct: 188 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 247

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           + D Y YNALI   C  G  DQA SL   +  R   PN  TF  LI G+C++G  D A K
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 307

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA----------GELEKAN---------LLFYKME 440
              KM  AGC P    +++ I+ LCK           GE+ + +         ++ +K+ 
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLL 367

Query: 441 IGKNPTLFLR-----LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +N  L  R     +S G N   D  +  T +  YC  G +++A  +LM+++++G   D
Sbjct: 368 KERNYGLVARTWGEMVSSGCN--PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE------- 548
            + YN+L++G   +G  + A+ + K++      P+  TY  L+  L R+   E       
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 485

Query: 549 ----------DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-IS 597
                     D F +F  M +N   P+   Y S++       +   A SL      D IS
Sbjct: 486 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 545

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
             +D     +  F +     +A   +  M       QL  Y   L GL  +GQ  +A  I
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605

Query: 658 FSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFL 694
           F  +       +P   V   +I GL K+G+ D++ ++ +
Sbjct: 606 F--MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 642



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 225/497 (45%), Gaps = 44/497 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ G+   G   KA+    KM+     PD   YN ++    R Q     +   + +
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLI----RGQCIDGHIESAFRL 238

Query: 160 VKL----NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           ++L      + +  T++ LIN L K G+T+ A  + D +  RGI PN  T+  +I+GLC+
Sbjct: 239 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             +AD A++   KM  +GC+PD   Y++ +   CK++   E L+ +    +    P   +
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ +I  L + + Y      + +M      PDVV Y   +R     G++ +A  +L +M 
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMS 418

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G+  DT  YN L+ G   +G  D A S+  ++    S+PN  T+ IL+  + R  +V+
Sbjct: 419 KNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE 478

Query: 396 DAQKL-----------------FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           D   L                 F+ M+K    P+ G ++++++G  + G  E+A  L   
Sbjct: 479 DVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSL 538

Query: 439 ME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M+   I  N  ++  L                V  +C +     A+ ++  + + G +P 
Sbjct: 539 MKEDSISLNEDIYTAL----------------VTCFCKSKRYLDAWVLVCSMIQHGFIPQ 582

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +++Y  L++G    G  + A ++F   + K   PD + +  +I+GL +    + +  +  
Sbjct: 583 LMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMII 642

Query: 556 QMPQNGCTPSPAVYKSL 572
            + +  C PS   Y  L
Sbjct: 643 MLERMNCRPSHQTYAML 659



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 180/404 (44%), Gaps = 54/404 (13%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+++R+  V+  +  + +LI G    G  E A      M+      D Y YNA++N   +
Sbjct: 204 LNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 263

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A +++  +      PN VTF+ LINGL KSGK ++A K L++M   G  P+ +T
Sbjct: 264 DGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYT 323

Query: 206 YTIVISGLCQINRADEAY-----------------------------------RLFLKMK 230
           Y+  I  LC++  + E                                     R + +M 
Sbjct: 324 YSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV 383

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
            SGC+PD V Y   +  +C   R++EA  +L    K+G      +Y+ L+DG     + D
Sbjct: 384 SSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTD 443

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIR-----------------GLSEAGKVKDAMKLLSD 333
            A +  ++M      P+   Y +++R                 G+ +A ++ D   L   
Sbjct: 444 HAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV 503

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNG 392
           M++   +P++  Y+++++GF + G  ++A SL V + K DS+  N   +T L+   C++ 
Sbjct: 504 MKKNEFLPNSGTYSSILEGFSEDGRTEEATSL-VSLMKEDSISLNEDIYTALVTCFCKSK 562

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              DA  L   M + G  P +  +  L+ GL   G+ +KA  +F
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF 606



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/391 (23%), Positives = 172/391 (43%), Gaps = 17/391 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L K    D      D L +  +   +  F  LI+G  K G  + A +   KM  
Sbjct: 255 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 314

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD Y Y++ +    + +     L+   EM++ +  P+ V ++++I+ L K     +
Sbjct: 315 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 374

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +   EM   G  P+  TYT  +   C   R +EA  + ++M  +G + D +AYN L++
Sbjct: 375 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMD 434

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI-----------------DGLFRAKRY 289
           G   + + D A+++L+       VP   +Y  L+                  G+++A   
Sbjct: 435 GHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIEL 494

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            + +  +  M + +  P+   Y  ++ G SE G+ ++A  L+S M+E  I  +   Y AL
Sbjct: 495 TDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 554

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  FC       A  L   + +   +P   ++  L+ G+   G  D A+++F        
Sbjct: 555 VTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDY 614

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            P   ++  +IDGL K G  + +  +   +E
Sbjct: 615 SPDEIVWKVIIDGLIKKGHSDISREMIIMLE 645



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 168/374 (44%), Gaps = 17/374 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+ L K    D+ W+ L+++ S   +  +  +   I    K+   ++ L   G+M +
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 349

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +P    Y  V++   +++ + L    + EMV   C P++VT++  +      G+   
Sbjct: 350 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +L EM++ G+  +   Y  ++ G   I + D A  +  +M      P+   Y  LL 
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469

Query: 247 GFCKLRRVDEAL-----------------ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              ++R V++ L                  L    +K+ F+P  G+YS +++G     R 
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +EA +    M E+ I  +  +Y  ++    ++ +  DA  L+  M + G +P    Y  L
Sbjct: 530 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G    G  D+A+ + +    +D  P+   + ++I G+ + G  D ++++   +E+  C
Sbjct: 590 LSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNC 649

Query: 410 FPSVGMFNALIDGL 423
            PS   +  L + L
Sbjct: 650 RPSHQTYAMLTEEL 663



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 17/333 (5%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K  Q G  F     ++    S  + + VI  LLK   + L  +T  E+ S   +    
Sbjct: 333 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 392

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +   +  Y   G   +A     +M +     D   YN +++          A+++  +M
Sbjct: 393 TYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQM 452

Query: 160 VKLNCLPNIVTFSLLIN-----------------GLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +PN  T+ +L+                  G+ K+ +      + D M +   LPN
Sbjct: 453 TSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPN 512

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY+ ++ G  +  R +EA  L   MK+   S +   Y AL+  FCK +R  +A  L+ 
Sbjct: 513 SGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVC 572

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           S  + GF+P+L SY  L+ GL    + D+A   +     +   PD +++ V+I GL + G
Sbjct: 573 SMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKG 632

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
               + +++  +      P    Y  L +   D
Sbjct: 633 HSDISREMIIMLERMNCRPSHQTYAMLTEELPD 665



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 37/300 (12%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +  SG  PD  T+NSLI G+C+   ++ A  LF ++ L+G   D V+Y TLI GL    R
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 547 EEDAFRIFGQMPQN-------------------------------GCTPSPAVYKSLMTW 575
            ++A  +FG+M Q                                G  PS   Y +++ +
Sbjct: 61  IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 576 SCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            CR RK   A  +  + + + ++         I  + ++G + +A++ L  M  +     
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +  Y   + G C +G+V +A+ + + +  C       +   LI G C  G+++ A  +  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
               +G I      N L+ +L   KD +   A  L   +++ G   +A  +    SL+ G
Sbjct: 241 LMEGDGLIADQYTYNALINAL--CKDGRTDQACSLFDSLETRGIKPNAVTF---NSLING 295


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 282/620 (45%), Gaps = 59/620 (9%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           + W+   EL++  +      +  +I    K G   +A E F +M+     P  Y YN ++
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
                   F  A  +   + +  C+P++V+F+ ++  L K  K + A+ +  E+ ++   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           PN  TY I+I  LC   R +EAYR+  +M+ +   P+ +  N +++  CK R+++EA  +
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
             S  + G  P   +Y  LIDGL +  + DEAY  + KM +     + V+Y  +IR    
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ +D  K+  ++  RG  PD    N  +      G +++ R +  +I     LP+  +
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           ++ILI G+ + G   +   +F+ M++ G       +NA++DG CK+G++ KA  +  +M 
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           E    PT+              A+   +V+       + +AY +  +    G   +++ Y
Sbjct: 360 EKCVQPTV--------------ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLY 405

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           +SLI+GF KVG I+ A  + +E+  KGL P+  T+ +L++ L + +   +A   F  M +
Sbjct: 406 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
             C P+   Y  L+   CR +K++ AF  W                  ++  ++G V N 
Sbjct: 466 MKCPPNTYTYSILINGLCRVQKYNKAFVFW------------------QDMQKQGLVPNV 507

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +                 YT  + GL + G + +A ++F        I    S   LI G
Sbjct: 508 V----------------TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEG 551

Query: 680 LC---------KRGYLDLAM 690
           +          + G+LD  M
Sbjct: 552 MSNANRAMEAYQAGWLDTTM 571



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 256/498 (51%), Gaps = 20/498 (4%)

Query: 79  FDLYWQTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           F+  ++ L+ LR      SVVS  F  +++   K    ++AL  F  MK+ D +P+   Y
Sbjct: 69  FEDAYKLLERLRERGCIPSVVS--FNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSSTY 125

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N ++++         A  +  EM   +  PN++T +++++ L K+ K E A K+ +  +Q
Sbjct: 126 NIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQ 185

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG  P+  TY  +I GL +  + DEAYRLF KM D+G + + V Y +L+  F    R ++
Sbjct: 186 RGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKED 245

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
              + +   + G  P L   +  +D +F+A   ++    +  +      PDV  Y ++I 
Sbjct: 246 GHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIH 305

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL++AG+ ++   +   M+++G   D   YNA++ GFC  G + +A  +  E+ ++   P
Sbjct: 306 GLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQP 365

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T+  ++ G+ +   +D+A  LF + +  G   +V ++++LIDG  K G +++A L+ 
Sbjct: 366 TVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLIL 425

Query: 437 YK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            + M+ G  P ++              +  ++++    A  I++A      + E    P+
Sbjct: 426 EEMMKKGLTPNVY--------------TWNSLLDALVKAEEINEALVCFQSMKEMKCPPN 471

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             TY+ LING C+V   N A   ++++Q +GL P+ VTY T+I+GL +V    DA+ +F 
Sbjct: 472 TYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFE 531

Query: 556 QMPQNGCTPSPAVYKSLM 573
           +   NG  P  A + +L+
Sbjct: 532 RFKANGGIPDAASFNALI 549



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 208/440 (47%), Gaps = 9/440 (2%)

Query: 2   SSTLNEVLTILDTVTPIEPALE--------PLLP-FLSKTTVTSVIMKTKNPQVGFRFFI 52
           SST N ++ +L     +E A           L P  L+   +   + K +  +  ++ F 
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            A++R       +  ++I  L K    D  ++  +++     +    V+  LI  ++  G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E   + F ++    C+PD+ + N  ++  F+         ++ ++     LP++ ++S
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LI+GL+K+G+      +   M Q+G   +   Y  V+ G C+  +  +AY +  +MK+ 
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
              P    Y A+++G  K+ R+DEA  L    +  G    +  YS LIDG  +  R DEA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           Y    +M ++ + P+V  +  ++  L +A ++ +A+     M+E    P+TY Y+ LI G
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 481

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C +   ++A     ++ K+  +PN  T+T +I G+ + G + DA  LF + +  G  P 
Sbjct: 482 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 541

Query: 413 VGMFNALIDGLCKAGELEKA 432
              FNALI+G+  A    +A
Sbjct: 542 AASFNALIEGMSNANRAMEA 561



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 191/424 (45%), Gaps = 56/424 (13%)

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A K   +++ +G+ PD   Y ++I   C  G L +A  L  ++    S+P  + +  +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G    G  +DA KL  ++ + GC PSV  FN+++  L K  ++++A  LF  M+    P 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEP- 120

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        + ++   +++  C  G + +AY+IL ++  +   P+++T N +++  
Sbjct: 121 -------------NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRL 167

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK   +  A K+F+    +G  PD VTY +LI+GL +  + ++A+R+F +M   G   +P
Sbjct: 168 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
            VY SL+      R F             I GR ++  K  +E +++G          + 
Sbjct: 228 VVYTSLI------RNFF------------IHGRKEDGHKIFKELIRRG---------CKP 260

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
           D  L          ++  + + G+V++   IF  +     +    S   LIHGL K G  
Sbjct: 261 DLTL-------LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYP 746
               ++F    + GF L  R  N ++    F K  K   AY +L  MK      + C+ P
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDG--FCKSGKVHKAYEILEEMK------EKCVQP 365

Query: 747 KTKS 750
              +
Sbjct: 366 TVAT 369



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 204/454 (44%), Gaps = 31/454 (6%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+ ++ ++  + ++PD V Y  MI  L +AG++ +A +L + M     VP  Y YN +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+   G  + A  L   + +R  +P+  +F  ++  + +   VD+A  LF  M+K    P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +   +N +ID LC  G +E+A  +  +ME   + +LF  L           ++  MV++ 
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEME---HASLFPNL----------LTVNIMVDRL 167

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C A  + +AYKI    ++ G  PD +TY SLI+G  K G ++ A +LF+++   G   + 
Sbjct: 168 CKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANP 227

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           V Y +LI       R+ED  +IF ++ + GC P   +  + M    +  +      +  +
Sbjct: 228 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFE 286

Query: 592 YLRDISGRDDESMKSI-----EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            +R      D    SI      +  Q  E  N    + +  F L+      Y   + G C
Sbjct: 287 DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALD---ARAYNAVVDGFC 343

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G+V +A  I   + E     T  +   ++ GL K   LD A  +F      G  L   
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIEL--- 400

Query: 707 VCNYLLRSLL---FSKDNKKVHAYHLLCRMKSVG 737
             N +L S L   F K  +   AY +L  M   G
Sbjct: 401 --NVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 117/227 (51%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +AV+    K       ++ L+E++   V      +  ++ G  K+   ++A   F + K 
Sbjct: 336 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKS 395

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + +V +Y+++++   +      A  +  EM+K    PN+ T++ L++ L K+ +   
Sbjct: 396 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 455

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+     M +    PN +TY+I+I+GLC++ + ++A+  +  M+  G  P+ V Y  +++
Sbjct: 456 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMIS 515

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           G  K+  + +A +L   F+ +G +P   S++ LI+G+  A R  EAY
Sbjct: 516 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 78/158 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I    K    D  +  L+E+    ++     +  L+    K  +  +AL  F  MKE
Sbjct: 406 SSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+ Y Y+ ++N   R Q +  A   + +M K   +PN+VT++ +I+GL+K G    
Sbjct: 466 MKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITD 525

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           A  + +     G +P+  ++  +I G+   NRA EAY+
Sbjct: 526 AYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 275/609 (45%), Gaps = 59/609 (9%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LR   + + +     L+ GY + GD  KA      M    C+ + Y Y  ++      + 
Sbjct: 209 LRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRC 268

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL +   M++  C PN+ T++LLI GL K G+   A  +LDEM +RG++P+ +TY  
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I G C+  R  +A  +   M+ +GC+PD   YN+L++G C   + DEA  LL      G
Sbjct: 329 MIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARG 387

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
           F P + +++ +I+G  +A++ D+A      M   K + D+  YGV+I  L +  ++K+A 
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAK 447

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
             L+++   G+ P+   Y ++I  +C +G +  A  +          PN  T++ LI G+
Sbjct: 448 DTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGL 507

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTL 447
            ++  +  A  L  KM++ G  P V  +  LI G CK  E + A  LF  ME  G  P  
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP-- 565

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D+ +   + +  C +G   +AY  L++    G +   +TY SL++GF 
Sbjct: 566 ------------DEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFS 610

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K GN   A  L +++  +G + DS TY  L+  L +  +  +A  I  QM   G   +  
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  +++   +                   G+ D +     E +  G   +AI       
Sbjct: 671 AYTIIISEMIKE------------------GKHDHAKSMFNEMISSGHKPSAIT------ 706

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRG 684
                     YT+++   C+ G+++EA ++     E +     P  V     I+G    G
Sbjct: 707 ----------YTVFISSYCKIGRIEEAGHLIG---EMERNGVAPDVVTYNVFINGCGHMG 753

Query: 685 YLDLAMDVF 693
           Y+D A    
Sbjct: 754 YMDCAFSTL 762



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 189/737 (25%), Positives = 316/737 (42%), Gaps = 50/737 (6%)

Query: 21  ALEPLLPFLSKTTVTSVI---MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           A + L PF++   V  +    +   +P     FF W A+R   R  A++ A +  LL   
Sbjct: 44  AYKRLAPFVTAAHVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARR 103

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-----KEFDCQPD 132
                +  L         VVS     +IS      D  +A+++   +     K     P 
Sbjct: 104 RAPANYDKL---------VVS-----MISCSGTAEDMREAVDAIQAIRRAGGKRLALSPK 149

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
              YN  L    R  +      +Y ++V+   LP+ VT++ +I    K G   +A +   
Sbjct: 150 C--YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFR 207

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
            + + G+  + +T   ++ G C+     +A  L + M   GC  +  +Y  L+ G C+ R
Sbjct: 208 LLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETR 267

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            V EAL LL    +DG  P L +Y+ LI GL +  R  +A     +M    + P V  Y 
Sbjct: 268 CVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYN 327

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI G  ++G++KDA+ + + M   G  PD + YN+LI G C  G  D+A  L      R
Sbjct: 328 AMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIAR 386

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P   TFT +I G C+   +DDA ++ + M  + C   +  +  LI  L K   L++A
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446

Query: 433 ----NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
               N +F     G +P + +  S              +++ YC  G +  A ++     
Sbjct: 447 KDTLNEIFAN---GLSPNVVIYTS--------------IIDAYCKVGKVGAALEVFKLTE 489

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  P+  TY+SLI G  +   ++ A+ L  ++Q  G+ P  +TY TLI G  +    +
Sbjct: 490 HEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 549

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           +AFR+F  M QNG TP    Y  L    C+  +   A+S  ++    ++     S+  ++
Sbjct: 550 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSL--VD 607

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            F + G  E A   + +M  +        Y++ L  LC+  ++ EAL+I   +       
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKG 667

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   +I  + K G  D A  +F   + +G   +P    Y +    + K  +   A H
Sbjct: 668 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH--KPSAITYTVFISSYCKIGRIEEAGH 725

Query: 729 LLCRMKSVGYDLDACLY 745
           L+  M+  G   D   Y
Sbjct: 726 LIGEMERNGVAPDVVTY 742



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 280/639 (43%), Gaps = 62/639 (9%)

Query: 86  LDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           LDE+ R G V  V   +  +I GY K G  + AL     M+   C PD + YN++++   
Sbjct: 311 LDEMPRRGVVPSVW-TYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC 369

Query: 145 ------RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
                  ++L   A+A  +        P ++TF+ +ING  K+ K + A+++   M    
Sbjct: 370 GGKPDEAEELLNGAIARGFS-------PTVITFTNIINGYCKAEKIDDALRVKSIMISSK 422

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
              +   Y ++IS L + +R  EA     ++  +G SP+ V Y ++++ +CK+ +V  AL
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAAL 482

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            + +  E +G  P   +YS LI GL + ++  +A A   KM E+ I P V+ Y  +I+G 
Sbjct: 483 EVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 542

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +  +  +A +L   M + G+ PD   YN L    C  G  ++A S  V   K+  +   
Sbjct: 543 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTK 599

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+T L+ G  + G  + A  L  KM   GC      ++ L+  LCK  +L +A  +  +
Sbjct: 600 VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQ 659

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M +             GN V     +  M+++    G    A  +  ++  SG+ P  IT
Sbjct: 660 MTL---------RGVKGNIVAYTIIISEMIKE----GKHDHAKSMFNEMISSGHKPSAIT 706

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y   I+ +CK+G I  A  L  E++  G+ PD VTY   ING   +   + AF    +M 
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG-----RDDESMKSIEEFLQK 613
              C P+   Y  L+       K  L  SL   +  D SG     + D   + +E  ++ 
Sbjct: 767 DASCEPNYWTYWLLL-------KHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH 819

Query: 614 G------EVENAIQGL-----LEMDFKLNDFQLAP--------YTIWLIGLCQDGQVKEA 654
           G         + I G      LE    L D  L          YT+ +   C     ++A
Sbjct: 820 GLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKA 879

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +  + ++EC       S   LI GLC  G  D A  +F
Sbjct: 880 ASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALF 918



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 255/606 (42%), Gaps = 68/606 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +I+GY K    + AL     M    C+ D+  Y  ++++  +K     A     E+
Sbjct: 394 TFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEI 453

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+V ++ +I+   K GK   A+++       G  PN +TY+ +I GL Q  + 
Sbjct: 454 FANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKL 513

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  L  KM++ G +P  + Y  L+ G CK    D A  L    E++G  P   +Y+ L
Sbjct: 514 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 573

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            D L ++ R +EAY++   + ++ +    V Y  ++ G S+AG  + A  L+  M   G 
Sbjct: 574 TDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGC 630

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D++ Y+ L++  C    L++A S+  ++  R    N   +TI+I  M + G  D A+ 
Sbjct: 631 KADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKS 690

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           +FN+M  +G  PS   +   I   CK G +E+A  L  +ME  G  P             
Sbjct: 691 MFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP------------- 737

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING---- 514
            D  +    +      G +  A+  L ++ ++   P+  TY  L+  F K+   N     
Sbjct: 738 -DVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVD 796

Query: 515 ------------ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                         +L + +   GL P +VTY ++I G  +  R E+A  +   M     
Sbjct: 797 TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDI 856

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           +P+  +Y  L+   C  + F  A S                                +  
Sbjct: 857 SPNEEIYTMLIKCCCDIKLFEKAASF-------------------------------VTN 885

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           ++E  F+ +   L  Y   + GLC +G   +A  +F  L+E        +   L  GL K
Sbjct: 886 MIECGFQPH---LESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942

Query: 683 RGYLDL 688
            G++D+
Sbjct: 943 AGHVDI 948



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/550 (24%), Positives = 239/550 (43%), Gaps = 63/550 (11%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS+L+K +       TL+E+ +  +S    ++  +I  Y KVG    ALE F   +   
Sbjct: 433 LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+P+ + Y++++    + Q    A+A+  +M +    P ++T++ LI G  K  + + A 
Sbjct: 493 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK-------------------- 228
           ++ + M Q G+ P++  Y ++   LC+  RA+EAY   +K                    
Sbjct: 553 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKA 612

Query: 229 ------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
                       M + GC  D   Y+ LL   CK ++++EAL++L      G    + +Y
Sbjct: 613 GNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAY 672

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +I  + +  ++D A + + +M     +P  + Y V I    + G++++A  L+ +M  
Sbjct: 673 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMER 732

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI----------- 385
            G+ PD   YN  I G   +G +D A S    +      PN  T+ +L+           
Sbjct: 733 NGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANA 792

Query: 386 -----CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                 GM     +D   +L  +M K G  P+   ++++I G CKA  LE+A +L   M 
Sbjct: 793 HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHM- 851

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +GK+             +     + TM ++  C   L  KA   +  + E G  P + +Y
Sbjct: 852 LGKD-------------ISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESY 898

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           + LI G C  G+ + A  LF +L       + V +  L +GL +    +   ++   M  
Sbjct: 899 HYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMEN 958

Query: 560 NGCTPSPAVY 569
             C      Y
Sbjct: 959 RHCRIDSETY 968



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 16/295 (5%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS ++K    D      +E+ S      +  + V IS Y K+G  E+A    G+M+   
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK-------- 180
             PDV  YN  +N          A +    M+  +C PN  T+ LL+    K        
Sbjct: 735 VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHY 794

Query: 181 ---SG-----KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
              SG     K +   ++L+ M + G+ P   TY+ +I+G C+  R +EA  L   M   
Sbjct: 795 VDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGK 854

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
             SP+   Y  L+   C ++  ++A + + +  + GF P L SY  LI GL     YD+A
Sbjct: 855 DISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKA 914

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            A +  + E     + V + ++  GL +AG V    +LLS M  R    D+  Y+
Sbjct: 915 KALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYS 969



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/458 (24%), Positives = 190/458 (41%), Gaps = 31/458 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERG---IVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           MI     A  +++A+  +  +R  G   +     CYN  ++      + +    L  ++ 
Sbjct: 116 MISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLV 175

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +   LP+T T+  +I   C+ G +  A + F  + ++G        NAL+ G C+ G+L 
Sbjct: 176 QEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLR 235

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           KA  L   M     P +  R         ++ S   +++  C    + +A  +L+ + + 
Sbjct: 236 KACWLLMMM-----PLMGCR--------RNEYSYTILIQGLCETRCVREALVLLLMMLQD 282

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P++ TY  LI G CK G I+ A  L  E+  +G+ P   TY  +I+G  +  R +DA
Sbjct: 283 GCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDA 342

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             I   M  NGC P    Y SL+   C  +       L     R  S         I  +
Sbjct: 343 LGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGY 402

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +  ++++A++    M        L  Y + +  L +  ++KEA +    L E  A    
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKD---TLNEIFANGLS 459

Query: 671 PSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS--KDNKKVH 725
           P+ V    +I   CK G +  A++VF  T   G   RP    Y   SL++   +D K   
Sbjct: 460 PNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG--CRPNAWTY--SSLIYGLIQDQKLHK 515

Query: 726 AYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
           A  L+ +M+  G       Y    +L+ G     E +N
Sbjct: 516 AMALITKMQEDGITPGVITY---TTLIQGQCKKHEFDN 550



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 6/186 (3%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D  WQ L+ +    ++  +  +  +I+G+ K    E+A      M   D  P+  IY  
Sbjct: 806 LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTM 865

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++      +LF  A +    M++    P++ ++  LI GL   G  + A  +  ++ +  
Sbjct: 866 LIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMD 925

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
              N+  + I+  GL +    D   +L   M++  C  D   Y+ + N       + EA 
Sbjct: 926 YNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNN------IHEAS 979

Query: 259 ALLRSF 264
            +  S+
Sbjct: 980 GMYESY 985



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 75/157 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+   K    +     LD +   ++S   +++ +LI     +   EKA      M E
Sbjct: 829 SSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIE 888

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP +  Y+ ++     +  +  A A++ ++++++   N V + +L +GL K+G  ++
Sbjct: 889 CGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDI 948

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             ++L  M  R    +  TY++V + + + +   E+Y
Sbjct: 949 CSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY 985


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 249/513 (48%), Gaps = 33/513 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI  L   +  +  +Q   E++   ++     +  L+  + KVG  E+A   F +
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M++  C P+V  Y A+++   + +    A  ++  M+   C+PNIVT++ LI+G  K+G+
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 184 TEVAIKMLDEMTQRGI-----------------LPNKFTYTIVISGLCQINRADEAYRLF 226
           TE A ++   M    +                  PN  TY  ++ GLC+ ++  EA  L 
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   GC P+ + Y+AL++GFCK+ ++DEA  +       G  P + +YS LID LF+ 
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           KR D A     KM E    P+VV+Y  M+ GL + GK  +A +L+  M E+G  P+   Y
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            A+I GF   G +D+   L   +  +   PN  T+ +LI   C  G++DDA KL  +M++
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                 +GM+  +I+G              +  E   +  L   LS+ G+ V      + 
Sbjct: 483 TYWPKHIGMYRKVIEG--------------FSHEFVASLGLLAELSEDGS-VPILPVYKL 527

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++ +  AG +  A ++  +L+ S +     TY SLI        ++ A KL+ ++  +G
Sbjct: 528 LIDNFIKAGRLEMALELHEELS-SFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRG 586

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             P+      LI GL RV + E+A ++   + Q
Sbjct: 587 FVPELSMLVCLIKGLLRVGKWEEALQLSDSICQ 619



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 291/661 (44%), Gaps = 128/661 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ------LFLLAL 153
           +F  L+  Y + GD   A +   KM     QP   +YN ++      +      +  LA 
Sbjct: 13  IFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAE 72

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+++  + N V        L   GK E A  ++ EM  +G +P+  TY+ VI  L
Sbjct: 73  RAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYL 132

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---------------- 257
           C  ++ ++A++LF +MK +G +PD   Y  LL+ FCK+  +++A                
Sbjct: 133 CNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNV 192

Query: 258 ---LALLRSFEK----------------DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
               AL+ ++ K                +G VP + +Y+ LIDG  +A   ++A   Y +
Sbjct: 193 VTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYAR 252

Query: 299 MFEEKI-----------------EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           M  +K+                 EP+VV YG ++ GL +A KVK+A  LL  M   G  P
Sbjct: 253 MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEP 312

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   Y+ALI GFC +G LD+A+ +  ++      PN +T++ LI  + ++  +D A K+ 
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            KM +  C P+V ++  ++DGLCK G+ ++A  L   ME                     
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMME--------------------- 411

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                                      E G  P+++TY ++I+GF K G ++  L+L + 
Sbjct: 412 ---------------------------EKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  KG  P+ +TY  LIN        +DA ++  +M Q        +Y+ ++        
Sbjct: 445 MTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVI------EG 498

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS-------IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           FS  F   L  L ++S  +D S+         I+ F++ G +E A    LE+  +L+ F 
Sbjct: 499 FSHEFVASLGLLAELS--EDGSVPILPVYKLLIDNFIKAGRLEMA----LELHEELSSFS 552

Query: 635 LA---PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
            A    Y   +  L    +V +A  ++S +     +      V LI GL + G  + A+ 
Sbjct: 553 AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612

Query: 692 V 692
           +
Sbjct: 613 L 613



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 243/530 (45%), Gaps = 39/530 (7%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           F+  +  + E+ S      S  +  +I         EKA + F +MK     PDVY Y  
Sbjct: 103 FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTT 162

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +L+   +  L   A   + EM +  C PN+VT++ LI+   K+ K   A ++ + M   G
Sbjct: 163 LLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC-----------------SPDFVAY 241
            +PN  TYT +I G C+    ++A +++ +MK+                     P+ V Y
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTY 282

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            AL++G CK  +V EA  LL +   +G  P    Y  LIDG  +  + DEA   + KM  
Sbjct: 283 GALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLG 342

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               P+V  Y  +I  L +  ++  A+K+L+ M E    P+   Y  ++ G C +G  D+
Sbjct: 343 HGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDE 402

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L + + ++   PN  T+T +I G  + G VD   +L   M   GC P+   +  LI+
Sbjct: 403 AYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLIN 462

Query: 422 GLCKAGELEKANLLFYKMEIG---KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
             C AG L+ A+ L  +M+     K+  ++ ++ +G +            E   + GL  
Sbjct: 463 HCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH-----------EFVASLGL-- 509

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
                L +L+E G++P +  Y  LI+ F K G +  AL+L +EL        + TY +LI
Sbjct: 510 -----LAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLI 563

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             L    + + AF+++  M + G  P  ++   L+    R  K+  A  L
Sbjct: 564 ESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 204/416 (49%), Gaps = 28/416 (6%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M   G  P+   +  ++   C+      AY+L  KM   G  P +V YN L+ G C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLID-GLFRAK--------------RYDEAYAWYRK 298
                  L S E  G   R  +Y+ +++ G+   K              ++++AY   R+
Sbjct: 62  -------LPSMEVIGLAER--AYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIRE 112

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   PD   Y  +I  L  A KV+ A +L  +M+  GI PD Y Y  L+  FC +GL
Sbjct: 113 MMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGL 172

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++QAR+   E+ +    PN  T+T LI    +   +  A ++F  M   GC P++  + A
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232

Query: 419 LIDGLCKAGELEKANLLFYKMEIGK----NPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           LIDG CKAGE EKA  ++ +M+  K    +  ++ R+     +  +  +   +V+  C A
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKA 292

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A  +L  ++  G  P+ I Y++LI+GFCKVG ++ A ++F ++   G  P+  TY
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +LI+ L +  R + A ++  +M +N C P+  +Y  ++   C+  K   A+ L L
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML 408



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 148/309 (47%), Gaps = 38/309 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  LI G+ KVG  ++A E F KM    C P+VY Y+++++  F+ +   LAL V  +M
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ +C PN+V ++ +++GL K GKT+ A +++  M ++G  PN  TYT +I G  +  R 
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---------------------- 257
           D    L   M   GC+P+F+ Y  L+N  C    +D+A                      
Sbjct: 436 DRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV 495

Query: 258 -----------LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM--FEEKI 304
                      L LL    +DG VP L  Y  LID   +A R + A   + ++  F    
Sbjct: 496 IEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAY 555

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +     Y  +I  L+ A KV  A KL SDM  RG VP+      LIKG   +G  ++A  
Sbjct: 556 QNT---YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612

Query: 365 LQVEIWKRD 373
           L   I + D
Sbjct: 613 LSDSICQMD 621


>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
 gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 642

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 265/575 (46%), Gaps = 52/575 (9%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPN 77
           E ALE L   +    V S++       V  +FF WA KR+  +   S    +I  L +  
Sbjct: 81  EKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEAR 140

Query: 78  GFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
            +   ++T+ E+ R+  VSV   V   L+    +     KAL  F + K   C+P    Y
Sbjct: 141 LYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTY 200

Query: 137 NAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           N+V+ +  ++        VY EM  + +C P+ +T+S LI+   K G+ + AI++ DEM 
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
              + P +  YT ++    ++ + ++A  LF +MK +GCSP    Y  L+ G  K  RVD
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320

Query: 256 EALALLRSFEKDGFVP-------------RLG----------------------SYSCLI 280
           EA    +   +DG  P             ++G                      SY+ +I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380

Query: 281 DGLFRAKRY-DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             LF +K +  E  +W+ KM  + + P    Y ++I G  +  +V+ A+ LL +M E+G 
Sbjct: 381 KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y +LI         + A  L  E+ +     ++  + ++I    + G + +A  
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LFN+M+  G  P V  +NAL+ G+ KAG + +AN L  KME            + G R  
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME------------ENGCRA- 547

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  S   ++  +   G+  +A ++   +  SG  PD +TYN+L+  F   G    A ++ 
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +E++ KG   D++TY ++++ +  VD E+D    F
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 225/475 (47%), Gaps = 49/475 (10%)

Query: 4   TLNEVLTILDTVTPIEPA-LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           T+ EV  + +T   + PA L  L+  L +  + S  +           F  A  RK   +
Sbjct: 148 TIQEV--VRNTYVSVSPAVLSELVKALGRAKMVSKALSV---------FYQAKGRKCKPT 196

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            ++ ++VI ML++    +   +   E+   G+    +  +  LIS Y K+G  + A+  F
Sbjct: 197 SSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF 256

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK+   QP   IY  +L I F+      AL ++ EM +  C P + T++ LI GL K+
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A     +M + G+ P+      +++ L ++ R +E   +F +M    C+P  V+Y
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376

Query: 242 NA------------------------------------LLNGFCKLRRVDEALALLRSFE 265
           N                                     L++G+CK  RV++AL LL   +
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + GF P   +Y  LI+ L +AKRY+ A   ++++ E        +Y VMI+   + GK+ 
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L ++M+ +G  PD Y YNAL+ G    G++++A SL  ++ +     + ++  I++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            G  R G+   A ++F  ++ +G  P    +N L+     AG  E+A  +  +M+
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 231/547 (42%), Gaps = 58/547 (10%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           TY  +I  L +     E YR   ++ +++  S      + L+    + + V +AL++   
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
            +     P   +Y+ +I  L +  ++++ +  Y +M  E    PD + Y  +I    + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +   A++L  +M++  + P    Y  L+  +  +G +++A  L  E+ +    P  +T+T
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G+ + G VD+A   +  M + G  P V   N L++ L K G +E+   +F +M + 
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367

Query: 443 K-NPTLFLRLSQGGNRVHDKASLQTMVEQ-YCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +  PT+               S  T+++  + +   + +      ++      P   TY+
Sbjct: 368 RCTPTV--------------VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+G+CK   +  AL L +E+  KG  P    Y +LIN L +  R E A  +F ++ +N
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
               S  VY  +                                  I+ F + G++  A+
Sbjct: 474 FGNVSSRVYAVM----------------------------------IKHFGKCGKLSEAV 499

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIH 678
               EM  + +   +  Y   + G+ + G + EA ++   + E  C+A +   + +  ++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII--LN 557

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           G  + G    A+++F     +G  ++P    Y      F+       A  ++  MK  G+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSG--IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615

Query: 739 DLDACLY 745
           + DA  Y
Sbjct: 616 EYDAITY 622


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 252/531 (47%), Gaps = 53/531 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDV   N VL +      +    AVY EM++L   P IVT++ L++   K G+ + A  +
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265

Query: 191 LDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           L EM  +  G L N  TY +VIS L +    + A +L   M+ S  +  F  YN L+   
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFT-YNPLITAL 324

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            +   V +  AL    E +G +P L +Y+ +I GL ++++ + A   + +M    + PD+
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  M+ G  +AG +K+A+ LL D+R  G+ P    YN LI G+C LG L++AR L+ E
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444

Query: 369 IWKRDSLPNTHTFTILICG--------------------------------MCRNGMVDD 396
           + ++   P+  T+TIL+ G                                +C   ++ D
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 504

Query: 397 AQKLFNKMEK---AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
             K F   E     G +P    +N +IDGLCK G L+ A  L  KM   G  P       
Sbjct: 505 THKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQP------- 557

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +   ++  +C  GL+ +A K+L  +   G  P ++TY  LI+  C+ GN+
Sbjct: 558 -------DCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNL 610

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A   F+++   G+ P+ +TY  LI+ L R  R   A+  F +M + G  P+   Y  L
Sbjct: 611 YSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           +  +CR   ++ A  L+ +  ++    D  +  ++ +   KG + +AI+ L
Sbjct: 671 IDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHMYHAIEYL 721



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 227/485 (46%), Gaps = 18/485 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRS-GNVSVVSDVFF-VLISGYYKVGDCEKALE 119
           +  + + ++   LK    D     L E+ + G   +++DV + V+IS   + G  E A +
Sbjct: 242 TIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAK 301

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M+    +   + YN ++     +       A+  EM     +P +VT++ +I+GL 
Sbjct: 302 LVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLL 360

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           KS + E A     EM   G+LP+  TY  +++G C+     EA  L   ++ +G +P  +
Sbjct: 361 KSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVL 420

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN L++G+C+L  ++EA  L     + G  P + +Y+ L++G  + +    A  ++ +M
Sbjct: 421 TYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEM 480

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + ++PD   Y   I      G    A +L   M  +GI PDT  YN +I G C  G L
Sbjct: 481 LSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNL 540

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             A+ L++++      P+  T+T LI   C  G++ +A+KL N M   G  PSV  +  L
Sbjct: 541 KDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTIL 600

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I   C+ G L  A   F KM ++G  P              ++ +   ++   C  G   
Sbjct: 601 IHTCCRRGNLYSAYGWFRKMLDVGIEP--------------NEITYNVLIHALCRTGRTL 646

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            AY    ++ E G  P+  TY  LI+G C+ GN   A++L+ E+   G+ PD  T+  L 
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 539 NGLQR 543
            G  +
Sbjct: 707 KGFDK 711



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 145/317 (45%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L +LR   ++     +  LI GY ++G  E+A     +M E  C PDV  Y  ++N + +
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   +A   + EM+     P+   ++  I      G T  A ++ + M  +GI P+  T
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVT 526

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y ++I GLC+     +A  L +KM   G  PD + Y  L++  C+   + EA  LL    
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            DG  P + +Y+ LI    R      AY W+RKM +  IEP+ + Y V+I  L   G+  
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A     +M ERG+ P+ Y Y  LI G C  G    A  L  E+ +    P+  T   L 
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 386 CGMCRNGMVDDAQKLFN 402
            G  +  M    + L N
Sbjct: 707 KGFDKGHMYHAIEYLEN 723



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 215/494 (43%), Gaps = 60/494 (12%)

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           LA  R     G  P +   +C++  L  A R+D+  A YR+M + +IEP +V Y  ++  
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 318 LSEAGKVKDAMKLLSDMRER--GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             + G+  +A  LL +M  +  G + +   YN +I      G L+ A  L V+  +    
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKL-VDSMRLSKK 311

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            ++ T+  LI  +   G V   + L  +ME  G  P++  +NA+I GL K+ ++E A L 
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLK 371

Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F +M  +G  P L               +  +M+  YC AG + +A  +L  L  +G  P
Sbjct: 372 FAEMRAMGLLPDLI--------------TYNSMLNGYCKAGNLKEALWLLGDLRRAGLAP 417

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            ++TYN+LI+G+C++G +  A +L +E+  +G  PD  TY  L+NG  +V     A   F
Sbjct: 418 TVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFF 477

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M   G  P    Y + +                      I G   ++ +  E  + KG
Sbjct: 478 DEMLSKGLQPDCFAYNTRICAEL------------------ILGDTHKAFQLREVMMLKG 519

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
              + +                 Y + + GLC+ G +K+A ++   +V   +    P C+
Sbjct: 520 IYPDTVT----------------YNVIIDGLCKTGNLKDAKDLKMKMV---SDGLQPDCI 560

Query: 675 K---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
               LIH  C+RG L  A  +    + +G  L+P V  Y +      +      AY    
Sbjct: 561 TYTCLIHAHCERGLLSEARKLLNGMVSDG--LQPSVVTYTILIHTCCRRGNLYSAYGWFR 618

Query: 732 RMKSVGYDLDACLY 745
           +M  VG + +   Y
Sbjct: 619 KMLDVGIEPNEITY 632



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 222/518 (42%), Gaps = 23/518 (4%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD    N +L       R D+  A+ R   +    P + +Y+ L+D   +  R DEA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 293 YAWYRKMFEEK---IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
               ++M  +    +  DV  Y V+I  L+  G +++A KL+  MR       ++ YN L
Sbjct: 263 SMLLKEMETQGGGCLLNDVT-YNVVISFLAREGHLENAAKLVDSMRLSKKA-SSFTYNPL 320

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I    + G + +  +LQ+E+     +P   T+  +I G+ ++  V+ AQ  F +M   G 
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P +  +N++++G CKAG L++A  L   +   G  PT+               +  T++
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVL--------------TYNTLI 426

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + YC  G + +A ++  ++ E G  PD+ TY  L+NG  KV N+  A + F E+  KGL+
Sbjct: 427 DGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ 486

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD   Y T I     +     AF++   M   G  P    Y  ++   C+      A  L
Sbjct: 487 PDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDL 546

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
            ++ + D    D  +    I    ++G +  A + L  M        +  YTI +   C+
Sbjct: 547 KMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCR 606

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G +  A   F  +++        +   LIH LC+ G   LA   F   L+ G  L P  
Sbjct: 607 RGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG--LAPNK 664

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             Y L      ++     A  L   M   G   D C +
Sbjct: 665 YTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 702


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 248/525 (47%), Gaps = 42/525 (8%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SV+  V  +L+  Y +VG  ++A+++  + K     P +   N ++N         +A+A
Sbjct: 154 SVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVA 213

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +Y  + +L   PN  T+ + I  L + G  E A+ +  EM + G+ PN  T +  I GLC
Sbjct: 214 IYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLC 273

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
              R+D  Y     ++ +    D  AY A++ GFC   ++ EA  +      +G  P   
Sbjct: 274 SHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY 333

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP----------------DVVLYGVMIRGL 318
            Y  LI    +A    +A A +  M    I+                 D VLY +++  L
Sbjct: 334 IYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDAL 393

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + GKV++A++LL++M+ R +  D   Y  LI G+C  G L  A+++  E+ +R   P+ 
Sbjct: 394 CKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDI 453

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+ IL+ G  RNG+  +A +L + +   G  P+    N +I+GLC AG++++A      
Sbjct: 454 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNT 513

Query: 439 ME-------------------IGKNPTLFLRLSQGG-------NRVHDKASLQTMVEQYC 472
           +E                     K   LF RLS+ G       +   ++     ++  +C
Sbjct: 514 LEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFC 573

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + +A  +   L E G  PD+ITY  +ING+C+V  +  A  +F +++ +G++PD +
Sbjct: 574 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVI 633

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           TY  +++G  + +  +DA  ++ +M   G  P    Y +L+   C
Sbjct: 634 TYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 256/599 (42%), Gaps = 71/599 (11%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           I+   +L+    + G  + AI  L +  +RG +P+  +   +++ L +  + D A  ++ 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            +K  G +P+   Y   +   C+    +EA+ + R  E+ G  P   + S  I+GL   K
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D  Y   R +       D   Y  +IRG     K+K+A  +  DM   GI PD Y Y 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ALI  +C  G L QA +L  +                   M  NG+  +    F +   +
Sbjct: 337 ALIHAYCKAGNLLQAVALHND-------------------MVSNGIKTNLVDQFKEFRDS 377

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G F    ++N ++D LCK G++E+A  L  +M+ G+  +L            D     T+
Sbjct: 378 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMK-GRRMSL------------DVVHYTTL 424

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  YC  G +  A  +  ++ E G  PDI+TYN L+ GF + G    AL+L   +  +GL
Sbjct: 425 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 484

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P+S T+  +I GL    + ++A   F    ++ C  +   Y +++   C+      A+ 
Sbjct: 485 KPNSATHNRIIEGLCMAGKVKEA-EAFLNTLEDKCLEN---YSAMVDGYCKANFTRKAYE 540

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG-LC 646
           L+ +  +                         I  +L +D + N          LIG  C
Sbjct: 541 LFSRLSK-----------------------QGILRMLALDVEPNQIMYGK----LIGAFC 573

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           +DG +K A  +F +LVE        +   +I+G C+   L  A D+F    + G  ++P 
Sbjct: 574 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG--IKPD 631

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWN--TREMEN 763
           V  Y +     SK N    A +L   M + G   D   Y    +LLPG  N  +R  +N
Sbjct: 632 VITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYT---ALLPGKCNFGSRHFDN 687



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 199/453 (43%), Gaps = 61/453 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I  L      DL ++ L  LR+ N  + +  +  +I G+      ++A + F  M  
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT---------------- 170
               PD YIY A+++   +    L A+A++ +MV      N+V                 
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVL 385

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++++++ L K GK E A+++L+EM  R +  +   YT +I+G C   +  +A  +F +MK
Sbjct: 386 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 445

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR------------------ 272
           + G  PD V YN L+ GF +     EAL LL      G  P                   
Sbjct: 446 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK 505

Query: 273 -------------LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI--------EPDVVLY 311
                        L +YS ++DG  +A    +AY  + ++ ++ I        EP+ ++Y
Sbjct: 506 EAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMY 565

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           G +I      G +K A  +   + ERGI PD   Y  +I G+C +  L +AR +  ++ +
Sbjct: 566 GKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKE 625

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R   P+  T+T+++ G  +   + DA  L+++M   G  P +  + AL+ G C  G    
Sbjct: 626 RGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHF 685

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            N         + P LF+     G R+ +  +L
Sbjct: 686 DNQWL------EEPKLFILAQPRGVRLEEMGAL 712


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 210/401 (52%), Gaps = 27/401 (6%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+++  E+      PN  TY ++I G C+  +  +A  +F  MK SG  P+    N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LL G C++ ++  AL L R  +   F+P   S++ L+ G F A R   A  ++++M   
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            +EPD+  Y +++  LS++G++ +A  L S M      PD   YN L+ G+C +G   +A
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEA 178

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           +SL  EI K    PN  T++I+I   C+   V++A ++F KM ++ C P+   FN LI G
Sbjct: 179 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAG 238

Query: 423 LCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA-GLIHKA 480
            CKAG LE A  LF +ME IG   T+               +  T+++  C   G ++ A
Sbjct: 239 FCKAGMLEDAIKLFAEMEKIGCKATI--------------VTYNTLIDSLCKKRGGVYTA 284

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  +L  +G  P I+TYNSLI GF +    N  L+L   +  +G +PD +TY  LI+G
Sbjct: 285 VDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVITYNCLISG 342

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           L   +R EDA R+F  M    C P+   +  L+   C ++K
Sbjct: 343 LCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKK 380



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 214/440 (48%), Gaps = 55/440 (12%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL ++ E++     PN  T+++LI G  K G+   A+ +  +M   G+LPN  T   ++ 
Sbjct: 9   ALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLL 68

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+I +   A +LF +M+     P   ++N LL GF    R   A+   +  +  G  P
Sbjct: 69  GLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEP 125

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L SY  L+  L  + R  EA+A +  M      PD++ Y V++ G  + G+  +A  L+
Sbjct: 126 DLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLM 182

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            ++ + G  P+ + Y+ +I  +C L  +++A  + +++ + + +PN  TF  LI G C+ 
Sbjct: 183 KEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKA 242

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA-GELEKANLLFYKME-IGKNPTL-- 447
           GM++DA KLF +MEK GC  ++  +N LID LCK  G +  A  LF K+E  G  PT+  
Sbjct: 243 GMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 302

Query: 448 FLRLSQG-GNRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAES 490
           +  L QG   R +D   L                  ++   C+A  +  A ++   +A +
Sbjct: 303 YNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA 362

Query: 491 GNL----------------------------PDIITYNSLINGFCKVGNINGALKLFKEL 522
            N+                            PD+ T+N++I  FCK G ++ A ++ K++
Sbjct: 363 PNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDM 422

Query: 523 QLKGLRPDSVTYGTLINGLQ 542
              G  P++ T   L +G+Q
Sbjct: 423 LKHGFYPNTYTTYALAHGIQ 442



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 182/346 (52%), Gaps = 16/346 (4%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+++G     S    +L+ G++  G   +A+E F +MK    +PD+  Y+ +L+      
Sbjct: 85  EMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSDSG 141

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A A++  M    C P+I+T+++L++G  K G+T  A  ++ E+ + G  PN FTY+
Sbjct: 142 RMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYS 198

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I+  C++++ +EA+ +F+KM +S C P+ V +N L+ GFCK   +++A+ L    EK 
Sbjct: 199 IIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKI 258

Query: 268 GFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           G    + +Y+ LID L + +     A   + K+    + P +V Y  +I+G SE  +  D
Sbjct: 259 GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RAND 316

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
            ++LL  M   G  PD   YN LI G C    ++ A+ L          PN  TF  LI 
Sbjct: 317 GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL---FNGMACAPNVTTFNFLIR 373

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           G+C    V++A+ + ++M      P +  FN +I   CKAG +  A
Sbjct: 374 GLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDA 415



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 208/461 (45%), Gaps = 48/461 (10%)

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           R+ D+AL L +      F P   +Y+ LI G  +  +  +A + +  M    + P+    
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             ++ GL E G++  A+KL  +M+    +P +  +N L++GF   G   +A     E+  
Sbjct: 64  NTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKA 120

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  ++ IL+  +  +G + +A  LF+ M    C P +  +N L+DG CK G+  +
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYE 177

Query: 432 ANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  L  + ++ G  P +F              +   ++  YC    + +A+++ M++ ES
Sbjct: 178 AQSLMKEILKAGYEPNVF--------------TYSIIINCYCKLDKVEEAWEVFMKMIES 223

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL-QRVDREED 549
             +P+ +T+N+LI GFCK G +  A+KLF E++  G +   VTY TLI+ L ++      
Sbjct: 224 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 283

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
           A  +F ++   G TP+   Y SL+     R    L     L ++     + D    +  I
Sbjct: 284 AVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRL---LCHMHAEGCKPDVITYNCLI 340

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVE 663
                   VE+A Q L       N    AP    +   + GLC   +V+EA NI   +  
Sbjct: 341 SGLCSANRVEDA-QRL------FNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRM-- 391

Query: 664 CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGF 701
                T P       +I   CK G +  A +V    LK+GF
Sbjct: 392 -----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGF 427



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 191/425 (44%), Gaps = 44/425 (10%)

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           A K   A++L  ++      P+ + YN LI+GFC  G + QA S+  ++     LPN  T
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
              L+ G+C  G +  A KLF +M+     P+    N L+ G   AG   +A   F +M+
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMK 119

Query: 441 I-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
             G  P              D  S   ++     +G + +A+ +   +  S   PDI+TY
Sbjct: 120 ASGVEP--------------DLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTY 162

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N L++G+CK+G    A  L KE+   G  P+  TY  +IN   ++D+ E+A+ +F +M +
Sbjct: 163 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 222

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL--QKGEVE 617
           + C P+   + +L+   C+      A  L+ +  +        +  ++ + L  ++G V 
Sbjct: 223 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 282

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE-----CKAIVTPPS 672
            A+    ++  KL    L P  +    L Q G  + A +   +L       CK  V   +
Sbjct: 283 TAV----DLFNKLEGAGLTPTIVTYNSLIQ-GFSERANDGLRLLCHMHAEGCKPDVITYN 337

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC--NYLLRSLLFSKDNKKVHAYHLL 730
           C  LI GLC    ++ A  +F     NG    P V   N+L+R L   K  K   A ++L
Sbjct: 338 C--LISGLCSANRVEDAQRLF-----NGMACAPNVTTFNFLIRGLCAQK--KVEEARNIL 388

Query: 731 CRMKS 735
            RM +
Sbjct: 389 DRMTA 393



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 45/287 (15%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I+   K +  +  W+   ++   N    +  F  LI+G+ K G  E A++ F +M++
Sbjct: 198 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 257

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFL-LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
             C+  +  YN +++   +K+  +  A+ ++ ++      P IVT++ LI G S+  +  
Sbjct: 258 IGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RAN 315

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
             +++L  M   G  P+  TY  +ISGLC  NR ++A RLF  M    C+P+   +N L+
Sbjct: 316 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLI 372

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
            G C  ++V+EA                                       R + +    
Sbjct: 373 RGLCAQKKVEEA---------------------------------------RNILDRMTA 393

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           PD+  +  +I    +AG + DA +++ DM + G  P+TY   AL  G
Sbjct: 394 PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 172/704 (24%), Positives = 334/704 (47%), Gaps = 36/704 (5%)

Query: 65  SNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
           SNSA  + +L    K   F      L+++   ++      + ++I    ++    +A   
Sbjct: 187 SNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLL 246

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M++ D  PD   YN ++N  F +     A  V+  M++   +P++ T++ +I+G  +
Sbjct: 247 LKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCR 306

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           + + + A+ +L EM   G++P++ TY+ +++G C+++    A  L + +K  G + +   
Sbjct: 307 NRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTM 366

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
              L++GFC++  + +A  +L+S  +DG  P + +YS LI+G+ R  +  E      +M 
Sbjct: 367 CTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ 426

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  I P+ VLY  +I    +AG VK A+K   D+  RG+V +   +NAL++ F   G++ 
Sbjct: 427 KSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMIT 486

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A   +  + + +   N+ +F  +I   C  G + +A  +++ M + G  P+V  +  L+
Sbjct: 487 EAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLL 546

Query: 421 DGLCKAGELEKA-NLLFYKMEIGKN------PTLFLRLSQGG---------------NRV 458
            GLC+ G L +A   +F  ++I           L L + + G               N +
Sbjct: 547 RGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   ++  +C  G I  A  +L  + E G +PD + Y  L+NG    G +  A  +
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYV 666

Query: 519 FKELQLK-GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           F+E+  K GL  D + Y +L+NG  +        R+   M QN   P+ A Y  LM    
Sbjct: 667 FQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYV 726

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLA 636
           +R +FS +  L+   +R     D+ + + +   L + G ++ A++ L +M  +       
Sbjct: 727 KRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKL 786

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVF 693
            + I +    +  ++  AL +F+ +   K +   PS      +I+GL ++ YLD + +V 
Sbjct: 787 VFDILITSFSEKSKMHNALRLFNCM---KCLHLSPSSKTFSAMINGLIRKNYLDQSHEVL 843

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
              L+ G  L+P   +Y+       +  +   A+ L   MK++G
Sbjct: 844 HEMLQVG--LQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIG 885



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 187/733 (25%), Positives = 318/733 (43%), Gaps = 106/733 (14%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  +R  +++     +  LI+G++  G    A   F  M      P V  Y  +++   R
Sbjct: 247 LKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCR 306

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    AL+V  EM     +P+ +T+S L+NG  K      A+ ++ ++  RGI  NK  
Sbjct: 307 NRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTM 366

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC---KLRRVDEAL---- 258
            TI+I G CQ+    +A ++   M + G  PD V Y+AL+NG C   K+    E L    
Sbjct: 367 CTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQ 426

Query: 259 -----------------------------------------------ALLRSFEKDG--- 268
                                                          ALLR+F ++G   
Sbjct: 427 KSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMIT 486

Query: 269 -------FVPRLG------SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
                  ++ R+       S++C+ID      +  EA++ Y  M      P+V  Y  ++
Sbjct: 487 EAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLL 546

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
           RGL + G +  A + +  + +     D   +NAL+ G C  G LD+A  +  ++ K + L
Sbjct: 547 RGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL 606

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+ HT+TIL+ G CR G +  A  +   M + G  P    +  L++GL   G+++ A+ +
Sbjct: 607 PDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYV 666

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F   EI     L+           D  +  +++  Y   G ++   +++  + ++   P+
Sbjct: 667 F--QEIICKEGLYA----------DCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPN 714

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             +YN L++G+ K G  + +L L+K +  KG+RPD+VTY  LI GL      + A +   
Sbjct: 715 SASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLE 774

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQK 613
           +M   G  P   V+  L+T    + K   A  L+  ++ L  +S         I   ++K
Sbjct: 775 KMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLH-LSPSSKTFSAMINGLIRK 833

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQDGQVKEALNIFSVLVECKAIVT 669
             ++ + + L EM        L P     I L    C+ G++  A   F +  E KAI  
Sbjct: 834 NYLDQSHEVLHEM----LQVGLQPNHTHYIALVNAKCRVGEIDRA---FRLKEEMKAIGI 886

Query: 670 PPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            P+ V    +I GLC+ G L+ A+ VF   +++G +  P V  +        K++K   A
Sbjct: 887 VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMV--PTVATFTTLMHSLCKESKIADA 944

Query: 727 YHL-----LCRMK 734
            HL     LCR+K
Sbjct: 945 LHLKRLMELCRLK 957



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 267/580 (46%), Gaps = 26/580 (4%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           CL N  T++ +++   K G+ + A+ +L++M +  I  + +TY I+I  LC+I R+  A+
Sbjct: 185 CLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M+    +PD   YN L+NGF    +++ A  +     +   VP + +Y+ +IDG 
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R +R D+A +   +M    + P  + Y  ++ G  +   +  A+ L+ D++ RGI  + 
Sbjct: 305 CRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINK 364

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                LI GFC +G + +A+ +   + +    P+  T++ LI GMCR   + + +++ ++
Sbjct: 365 TMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSR 424

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLF---YKMEIGKNPTL------------- 447
           M+K+G  P+  ++  LI   CKAG ++ A   F   Y+  +  NP +             
Sbjct: 425 MQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGM 484

Query: 448 ------FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                 F +     N   +  S   +++ YC  G I +A+ +   +   G+ P++ TY +
Sbjct: 485 ITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQN 544

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L+ G C+ G++  A +    L       D  T+  L+ G+ +    ++A  I  +M +N 
Sbjct: 545 LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAI 620
           C P    Y  L++  CR+ K   A  +    L      D  +    +   + +G+V+ A 
Sbjct: 605 CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664

Query: 621 QGLLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
               E+  K   +     Y   + G  + G V     + S + + +      S   L+HG
Sbjct: 665 YVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHG 724

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
             KRG    ++ ++ Y ++ G  +RP    Y L  L  S+
Sbjct: 725 YVKRGQFSKSLYLYKYMVRKG--IRPDNVTYRLLILGLSE 762



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 162/663 (24%), Positives = 296/663 (44%), Gaps = 56/663 (8%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +L+S  +++   +  +LI G+ +VG+  KA +    M E    PDV  Y+A++N   R  
Sbjct: 354 DLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMA 413

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                  +   M K   LPN V ++ LI    K+G  +VA+K   ++ +RG++ N   + 
Sbjct: 414 KMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHN 473

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            ++    +     EA      M     S + V++N +++ +C   ++ EA ++     + 
Sbjct: 474 ALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRY 533

Query: 268 GFVPRLGSYSCLIDGL------FRAKRY-----------------------------DEA 292
           G  P + +Y  L+ GL       +AK++                             DEA
Sbjct: 534 GHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEA 593

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
                KM +    PD+  Y +++ G    GK+  A+ +L  M E+G+VPDT  Y  L+ G
Sbjct: 594 LDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNG 653

Query: 353 FCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             + G +  A  +  EI  ++ L  +   +  L+ G  + G V+  +++ + M +   +P
Sbjct: 654 LINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYP 713

Query: 412 SVGMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   +N L+ G  K G+  K+  L+ Y +  G  P              D  + + ++  
Sbjct: 714 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP--------------DNVTYRLLILG 759

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
               GLI  A K L ++   G  PD + ++ LI  F +   ++ AL+LF  ++   L P 
Sbjct: 760 LSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPS 819

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           S T+  +INGL R +  + +  +  +M Q G  P+   Y +L+   CR  +   AF L  
Sbjct: 820 SKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK- 878

Query: 591 QYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
           + ++ I     E  +S  I    + G++E A+     M        +A +T  +  LC++
Sbjct: 879 EEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKE 938

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++ +AL++  ++  C+  V   S   LI GLCK  ++  A+D++      G  L P V 
Sbjct: 939 SKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG--LWPNVT 996

Query: 709 NYL 711
            Y+
Sbjct: 997 TYI 999



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 217/423 (51%), Gaps = 16/423 (3%)

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            AL +  +MVK NCLP+I T+++L++G  + GK   A+ ML  M ++G++P+   YT +++
Sbjct: 593  ALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLN 652

Query: 212  GLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            GL    +   A  +F ++    G   D +AYN+L+NG+ K   V+    ++    ++   
Sbjct: 653  GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVY 712

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            P   SY+ L+ G  +  ++ ++   Y+ M  + I PD V Y ++I GLSE G +  A+K 
Sbjct: 713  PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 772

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            L  M   GI PD   ++ LI  F +   +  A  L   +      P++ TF+ +I G+ R
Sbjct: 773  LEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIR 832

Query: 391  NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL 449
               +D + ++ ++M + G  P+   + AL++  C+ GE+++A  L  +M+ IG  P    
Sbjct: 833  KNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPA--- 889

Query: 450  RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                       + +  +++   C  G + +A  +   +  SG +P + T+ +L++  CK 
Sbjct: 890  -----------EVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKE 938

Query: 510  GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
              I  AL L + ++L  L+ D V+Y  LI GL +     DA  ++G+M   G  P+   Y
Sbjct: 939  SKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTY 998

Query: 570  KSL 572
             +L
Sbjct: 999  ITL 1001



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 232/474 (48%), Gaps = 18/474 (3%)

Query: 95   SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
            +V    F  L+ G  K G  ++AL+   KM + +C PD++ Y  +L+   RK   L AL 
Sbjct: 571  AVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALV 630

Query: 155  VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT-QRGILPNKFTYTIVISGL 213
            +   M++   +P+ V ++ L+NGL   G+ + A  +  E+  + G+  +   Y  +++G 
Sbjct: 631  MLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGY 690

Query: 214  CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             +    +   R+   M  +   P+  +YN L++G+ K  +  ++L L +   + G  P  
Sbjct: 691  LKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDN 750

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             +Y  LI GL      D A  +  KM  E I PD +++ ++I   SE  K+ +A++L + 
Sbjct: 751  VTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNC 810

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            M+   + P +  ++A+I G      LDQ+  +  E+ +    PN   +  L+   CR G 
Sbjct: 811  MKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGE 870

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
            +D A +L  +M+  G  P+    +++I GLC+ G+LE+A ++F  M   G  PT+     
Sbjct: 871  IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTV----- 925

Query: 453  QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKVGN 511
                     A+  T++   C    I  A   L +L E   L  D+++YN LI G CK  +
Sbjct: 926  ---------ATFTTLMHSLCKESKIADALH-LKRLMELCRLKVDVVSYNVLITGLCKDKH 975

Query: 512  INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            I+ AL L+ E++ KGL P+  TY TL   +    R ++   +   + + G  P+
Sbjct: 976  ISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPA 1029



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 258/595 (43%), Gaps = 59/595 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++  L + G+++     L E   R    +  T  I+++ LC      +A  +  KMK S 
Sbjct: 126 ILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMK-SC 184

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C  +   YN +L+ + K  R   AL +L   E+D     + +Y+ +ID L R KR   A+
Sbjct: 185 CLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              ++M ++ + PD   Y  +I G    GK+  A  + + M  + +VP    Y  +I G+
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C    +D+A S+  E+     +P+  T++ L+ G C+  M+  A  L   ++  G   + 
Sbjct: 305 CRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINK 364

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
            M   LIDG C+ GE+ KA  +   M E G +P              D  +   ++   C
Sbjct: 365 TMCTILIDGFCQVGEISKAKQILKSMLEDGIDP--------------DVVTYSALINGMC 410

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
               +H+  +IL ++ +SG LP+ + Y +LI  +CK G +  ALK F ++  +GL  + V
Sbjct: 411 RMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPV 470

Query: 533 TYGTLINGLQR--VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +  L+    R  +  E + FR +  M +   + +   +  ++   C R K   AFS++ 
Sbjct: 471 IHNALLRAFYREGMITEAEHFRQY--MSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVY- 527

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                            ++ ++ G   N                +  Y   L GLCQ G 
Sbjct: 528 -----------------DDMVRYGHSPN----------------VCTYQNLLRGLCQGGH 554

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           + +A      L++  + V   +   L+ G+CK G LD A+D+    +KN  +  P +  Y
Sbjct: 555 LVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL--PDIHTY 612

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
            +    F +  K + A  +L  M   G   D   Y     LL G  N  +++  S
Sbjct: 613 TILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYT---CLLNGLINEGQVKAAS 664


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 186/746 (24%), Positives = 317/746 (42%), Gaps = 58/746 (7%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV--------VSDV 100
           R   +    K+LRS   +   +S       F++    LD L  G V V        +S V
Sbjct: 107 RILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEI-SHFLDTLSDGFVDVDSKKQSLFMSKV 165

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+  Y  VG  + A++   +M      P ++I N ++N   +     +ALAVY ++ 
Sbjct: 166 YDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLK 225

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +L   PN  T++++I  L  +G  E A+ ++ EM + GI P  F YT  I GLC    +D
Sbjct: 226 RLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSD 285

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
             Y++    K +    D  AY   + GFC   + D+A ++LR  EK+G VP +  Y+ LI
Sbjct: 286 LGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTALI 345

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +A    +AYA+  +M  + ++ + V+ G ++  L E G   + +   +  +  G+ 
Sbjct: 346 CRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLF 405

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D   YN ++   C LG L++A +L  E+  +    +   +T LI G C  G V DA K+
Sbjct: 406 LDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKV 465

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNP------TLFLRLSQ 453
           F +M + G    V  ++ L+ G C+ G   E  NLL Y       P       +   L  
Sbjct: 466 FEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCM 525

Query: 454 GG---------NRVHDKA--SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
           GG         N + DK+  +   M+  YC A     A K+  +L+  G++     YN L
Sbjct: 526 GGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYN-L 584

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE---EDAFRIFGQMPQ 559
           +   C+ G+ +G L L + +    + P    YG L   L R         A  +F  + +
Sbjct: 585 LKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLK 644

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDISGRDDESMKSI 607
            G TP    Y  ++T  CR      A  L+            + +   + G     +K +
Sbjct: 645 RGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKV 704

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVE 663
                       I   L +  ++ D ++ P    YT+ + G C+   + +A+ +F  ++E
Sbjct: 705 YSAANAKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIE 764

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK---- 719
                   +   L+ G C+RG +D A+++       G     R  + LL  +L ++    
Sbjct: 765 RGLEPDIITYTALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQCSA 824

Query: 720 -------DNKKVHAYHLLCRMKSVGY 738
                  D   +   H+ CR+    Y
Sbjct: 825 PQCLKYFDGYSLSICHIFCRIVQACY 850


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 209/417 (50%), Gaps = 13/417 (3%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M  L  +P+I  F+  +N L +  + E A+++   M  +G  P+  +YTI+I  LC   
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R DEA +++ ++ D G SPD+ A  AL+ G C   RVD A  L+    K G       Y+
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LIDG  R  R D+A      M      PD+V Y +++    E G V +A++L+  M   
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ PD Y YN L+KGFC   ++D+A  + VE  +   + +  ++  +I   C+       
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKG 348

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +LF +M   G  P +  FN LID   + G       L  +M         +R+      
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTK-------MRV------ 395

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           + D      +V+  C  G +  A+ +   + E+G  PD+I+YN+L+NGFCK   +  A+ 
Sbjct: 396 LPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMH 455

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           LF E+Q KGL PD VTY  ++ GL R  +   A R++ QM + G T +  + ++L+ 
Sbjct: 456 LFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVN 512



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 236/491 (48%), Gaps = 44/491 (8%)

Query: 142 IAFRKQLFLL--------ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
           +A+R Q+  L        A+ ++ +M + NC    V ++  I  L +  +  +A      
Sbjct: 11  LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLA----HH 66

Query: 194 MTQRGILPN-----KFTYTIVISGLCQINRADE---AYRLFLKMKDSGCSPDFVAYNALL 245
             +R ++P       FTY+  IS LC           + L L M   G  PD  A+N  L
Sbjct: 67  YYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYL 126

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           N  C+  R++ AL L  S    G  P + SY+ +ID L  AKR+DEA   +R++ ++ + 
Sbjct: 127 NLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLS 186

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD      ++ GL   G+V  A +L+  + + G+  ++  YNALI GFC +G +D+A  +
Sbjct: 187 PDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKI 246

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           +  + +   +P+  T+ IL+   C  GMVD+A +L   ME++G  P +  +N L+ G CK
Sbjct: 247 KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306

Query: 426 AGELEKANLLF--------------YKMEIG---------KNPTLFLRLSQGGNRVHDKA 462
           A  +++A+L+               Y   I          K   LF  +   G R  D  
Sbjct: 307 ANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIR-PDMV 365

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++ +   G  H   K+L ++ +   LPD I Y ++++  CK G ++ A  +F+++
Sbjct: 366 TFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDM 425

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              G+ PD ++Y  L+NG  +  R  DA  +F +M   G  P    YK ++    R +K 
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKI 485

Query: 583 SLAFSLWLQYL 593
           SLA  +W Q +
Sbjct: 486 SLACRVWDQMM 496



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 189/431 (43%), Gaps = 48/431 (11%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E ALE F  M      PDV  Y  +++     + F  A  V+  ++     P+      L
Sbjct: 136 ETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVAL 195

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           + GL   G+ ++A +++  + + G+  N   Y  +I G C++ R D+A ++   M  +GC
Sbjct: 196 VVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGC 255

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V YN LLN  C+   VDEA+ L+ + E+ G  P L SY+ L+ G  +A   D A+ 
Sbjct: 256 VPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHL 315

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +  + K   DVV Y  +I    +A + +   +L  +M  +GI PD   +N LI  F 
Sbjct: 316 MMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFL 375

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G     + L  E+ K   LP+   +T ++  +C+NG VD A  +F  M + G  P V 
Sbjct: 376 REGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVI 435

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +NAL++G CK   +  A  LF +M+                                  
Sbjct: 436 SYNALLNGFCKTSRVMDAMHLFDEMQ---------------------------------- 461

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                           G  PD +TY  ++ G  +   I+ A +++ ++  +G   +    
Sbjct: 462 --------------SKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 507

Query: 535 GTLINGLQRVD 545
            TL+N +Q  D
Sbjct: 508 ETLVNAIQSSD 518



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 4/305 (1%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L      DL ++ +  +  G V V S V+  LI G+ ++G  +KA++    M   
Sbjct: 194 ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT 253

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
            C PD+  YN +LN    + +   A+ +   M +    P++ +++ L+ G  K+   + A
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
             M+ E  Q   + +  +Y  VI+  C+  R  + Y LF +M   G  PD V +N L++ 
Sbjct: 314 HLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDA 373

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           F +         LL    K   +P    Y+ ++D L +  + D A++ +R M E  + PD
Sbjct: 374 FLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPD 433

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V+ Y  ++ G  +  +V DAM L  +M+ +G+ PD   Y  ++ G     +  +  SL  
Sbjct: 434 VISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGL----IRGKKISLAC 489

Query: 368 EIWKR 372
            +W +
Sbjct: 490 RVWDQ 494



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 209/494 (42%), Gaps = 60/494 (12%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY----GVMIRGLSEAGKVKDAMKL 330
           +Y   I  L +A   ++A   + +M E       V Y    GV++R           + L
Sbjct: 12  AYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLR--------HSRLHL 63

Query: 331 LSDMRERGIVPD-----TYCYNALIKGFC------DLGLLDQARSLQVEIWKRDSLPNTH 379
                 R ++P       + Y+  I   C      +L L+    SL +++     +P+  
Sbjct: 64  AHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLI---HSLLLDMDSLGFVPDIW 120

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            F   +  +CR   ++ A +LF+ M   G  P V  +  +ID LC A   ++A  ++ ++
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + G +P              D  +   +V   C+ G +  AY++++ + + G   + + 
Sbjct: 181 IDKGLSP--------------DYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLV 226

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN+LI+GFC++G ++ A+K+   +   G  PD VTY  L+N        ++A R+   M 
Sbjct: 227 YNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVE 617
           ++G  P    Y  L+   C+      A  + ++ ++     D  S  + I  F +     
Sbjct: 287 RSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTR 346

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
              +   EM  K     +  + I +    ++G       +   + + + +   P C+   
Sbjct: 347 KGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVL---PDCIFYT 403

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCR 732
            ++  LCK G +D+A  VF   ++NG  + P V +Y   +LL  F K ++ + A HL   
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENG--VNPDVISY--NALLNGFCKTSRVMDAMHLFDE 459

Query: 733 MKSVGYDLDACLYP 746
           M+S G      LYP
Sbjct: 460 MQSKG------LYP 467



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 83/170 (48%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            S + VI+   K       ++  +E+    +      F +LI  + + G      +   +
Sbjct: 330 VSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDE 389

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M +    PD   Y AV++   +     +A +V+ +MV+    P++++++ L+NG  K+ +
Sbjct: 390 MTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSR 449

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
              A+ + DEM  +G+ P++ TY +++ GL +  +   A R++ +M + G
Sbjct: 450 VMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 4/187 (2%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  TV +   K +  + G+  F     +       + + +I   L+     +  + LDE
Sbjct: 330 VSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDE 389

Query: 89  LRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           +    + V+ D  F   ++    K G  + A   F  M E    PDV  YNA+LN   + 
Sbjct: 390 MTK--MRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKT 447

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
              + A+ ++ EM      P+ VT+ L++ GL +  K  +A ++ D+M +RG   N+   
Sbjct: 448 SRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLS 507

Query: 207 TIVISGL 213
             +++ +
Sbjct: 508 ETLVNAI 514


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 288/604 (47%), Gaps = 66/604 (10%)

Query: 6   NEVLTILDTVTPIEPALEPL-----LPFLSKTTVTSVIM--------KTKNPQVGFRFFI 52
           +EVL +L ++T    AL         P +  TT T   M        K ++    F F  
Sbjct: 90  DEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQ 149

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
               R+ L ++ +    +S+     G       L+++R     + +  +  LI    + G
Sbjct: 150 KKIIRRDLDTYLTIFKALSI---RGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSG 206

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            C +ALE + +M     +P +  Y+A++    +K+   + + +  EM  L   PN+ TF+
Sbjct: 207 FCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFT 266

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           + I  L ++GK + A ++   M   G  P+  TYT++I  LC   + + A  LF+KMK +
Sbjct: 267 ICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN 326

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  PD V Y  LL+ F     +D         E DG++P + +++ L+D L +A+ +DEA
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           +A +  M ++ I P++  Y  +I GL  AG+++DA+KLL  M   G+ P  Y YN  I  
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDY 446

Query: 353 F-----------------------------------CDLGLLDQARSLQVEIWKRDSLPN 377
           F                                    ++G L +A+++   + +    P+
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
           + T+ +++    + G VD+A  L ++M + GC P V + N+LID L KAG +++A  +F 
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 438 KMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M+  K +PT+               +  T++      G + KA ++   + E    P+ 
Sbjct: 567 RMKDMKLSPTV--------------VTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           I++N+L++ FCK   +  ALK+F ++ +   +PD +TY T+I GL + ++   AF  F Q
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 557 MPQN 560
           + ++
Sbjct: 673 LKKS 676



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 266/586 (45%), Gaps = 59/586 (10%)

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           AV+  M K     ++ T+  +   LS  G       +L++M + G + N ++Y  +I  L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            Q     EA  ++ +M   G  P    Y+AL+    K R  +  + LL+  E  G  P +
Sbjct: 203 IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV 262

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++  I  L RA + DEAY  +R+M +E   PD+V Y V+I  L  AG++++A +L   
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVK 322

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M+  G  PD   Y  L+  F D G LD  +    ++     +P+  TFTIL+  +C+   
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLS 452
            D+A   F+ M K G  P++  +N LI GL +AG +E A  L   ME +G  PT +    
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAY---- 438

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +    ++ +  +G   KA +   ++   G +P+I+  N+ +    ++G +
Sbjct: 439 ----------TYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F  L+  GL PDSVTY  ++    +V + ++A  +  +M +NGC P   V  SL
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
                                             I+   + G V+ A Q    M  ++ D
Sbjct: 549 ----------------------------------IDSLYKAGRVDEAWQ----MFDRMKD 570

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
            +L+P    Y   L GL ++G+V++A+ +F  ++E K      S   L+   CK   ++L
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVEL 630

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           A+ +F  +       +P V  Y        K+NK  HA+    ++K
Sbjct: 631 ALKMF--SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/583 (26%), Positives = 242/583 (41%), Gaps = 88/583 (15%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    D  WQ  D ++   +S     +  L+SG  K G  +KA+E F  M E
Sbjct: 546  NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              C P+   +N +L+   +     LAL ++ +M  ++C P+++T++ +I GL K  K   
Sbjct: 606  KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLC---QINRADEAYRLFLKMKDSGCSPDF----- 238
            A     ++ ++ + P+  T   ++ GL    QI  A    R F+       +  F     
Sbjct: 666  AFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 239  --------------VAYNALLNG--------------FCKLRRVDEALALLRSFEKD-GF 269
                           A   +LNG               CK +R   A  +   F K  G 
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784

Query: 270  VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
             P L SY+CLI  L      ++A+  ++ M      PD   + +++    ++GK+ +  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  +M  R   PD   YN +I        LD+A     ++   D  P   T+  LI G+ 
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
            + G +++A +LF +M   GC P+  +FN LI+G  K G+ E A  LF +M   G  P   
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP--- 961

Query: 449  LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                       D  S   +V+  C AG + +A     +L  +G  PD I YN +ING  K
Sbjct: 962  -----------DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 509  -----------------------------------VGNINGALKLFKELQLKGLRPDSVT 533
                                                G +  A ++++ELQL GL PD  T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 534  YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            Y  LI G    +  E A+ ++  M  +GC P+   Y  L   S
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 173/712 (24%), Positives = 307/712 (43%), Gaps = 83/712 (11%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + ++ +L K   FD  + T D +R   +      +  LI G  + G  E AL+  G M+ 
Sbjct: 371  TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               QP  Y YN                                   + I+   KSG+T  
Sbjct: 431  VGVQPTAYTYN-----------------------------------IFIDYFGKSGETGK 455

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A++  ++M  +GI+PN       +  L ++ R  EA  +F  ++++G +PD V YN ++ 
Sbjct: 456  AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMK 515

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             + K+ +VDEA+ LL    ++G  P +   + LID L++A R DEA+  + +M + K+ P
Sbjct: 516  CYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSP 575

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             VV Y  ++ GL + G+V+ A++L   M E+   P+T  +N L+  FC    ++ A  + 
Sbjct: 576  TVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMF 635

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             ++   D  P+  T+  +I G+ +   V+ A   F++++K+   P       L+ GL K 
Sbjct: 636  SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKC 694

Query: 427  GELEK----ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            G++      A    Y++    N + +  L  G           T+VE      +I     
Sbjct: 695  GQIGDAISIARDFMYQVRFRVNRSFWEDLMGG-----------TLVEAEMDKAIIFAEEL 743

Query: 483  ILMQLAESGN--LPDIITYNSLINGFCKVGNINGALKLFKELQLK-GLRPDSVTYGTLIN 539
            +L  +    +  +P       L+   CK      A ++F +   K G+ P   +Y  LI 
Sbjct: 744  VLNGICREDSFLIP-------LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIG 796

Query: 540  GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
             L  V   E A+ +F  M   GC P    +  L+    +  K +  F L+ + +      
Sbjct: 797  ELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP 856

Query: 600  DDESMKSIEEFLQKGEVENAIQGLLEMDFKL--NDFQLAP--YTIWLIGLCQDGQVKEAL 655
            D  +   +   L K    N +   L+  + L  +DF+  P  Y   + GL + G+++EA+
Sbjct: 857  DAITYNIVISSLAKS---NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 656  NIFSVLVE--CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             +F  + +  CK     P+C     LI+G  K G  + A  +F   +  G  +RP + +Y
Sbjct: 914  RLFEEMSDYGCK-----PNCAIFNILINGYGKIGDTETACQLFKRMVNEG--IRPDLKSY 966

Query: 711  LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
             +         +   A +    +KS G D D   Y +   ++ G   ++ ME
Sbjct: 967  TILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR---IINGLGKSQRME 1015



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 230/516 (44%), Gaps = 57/516 (11%)

Query: 99   DVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
            DV  V  LI   YK G  ++A + F +MK+    P V  YN +L+   ++     A+ ++
Sbjct: 541  DVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELF 600

Query: 157  YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
              M++  C PN ++F+ L++   K+ + E+A+KM  +MT     P+  TY  VI GL + 
Sbjct: 601  ESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660

Query: 217  NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF------------ 264
            N+ + A+  F ++K S   PD V    LL G  K  ++ +A+++ R F            
Sbjct: 661  NKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719

Query: 265  ------------EKD-----------GFVPRLGSYSC-LIDGLFRAKRYDEAYAWYRKMF 300
                        E D             + R  S+   L+  L + KR   AY  + K F
Sbjct: 720  WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK-F 778

Query: 301  EEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
             +K  I P +  Y  +I  L E    + A  L  DM+  G  PD + +N L+      G 
Sbjct: 779  TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838

Query: 359  LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            + +   L  E+  R   P+  T+ I+I  + ++  +D A   F  +  +   P+   +  
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 419  LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            LIDGL K G LE+A  LF +M + G  P                A    ++  Y   G  
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNC--------------AIFNILINGYGKIGDT 944

Query: 478  HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
              A ++  ++   G  PD+ +Y  L++  C  G ++ AL  F EL+  GL PD + Y  +
Sbjct: 945  ETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRI 1004

Query: 538  INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            INGL +  R E+A  ++ +M   G  P    Y SLM
Sbjct: 1005 INGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 172/704 (24%), Positives = 305/704 (43%), Gaps = 95/704 (13%)

Query: 32   TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
            T +  V+ K ++    F  F    K+  L +  + + +I  LL+    +   + L  + S
Sbjct: 371  TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK-------------------------- 125
              V   +  + + I  + K G+  KA+E+F KMK                          
Sbjct: 431  VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 126  ---------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
                     E    PD   YN ++    +      A+ +  EM++  C P+++  + LI+
Sbjct: 491  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 177  GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
             L K+G+ + A +M D M    + P   TY  ++SGL +  R  +A  LF  M +  CSP
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSP 610

Query: 237  DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
            + +++N LL+ FCK   V+ AL +          P + +Y+ +I GL +  + + A+ W+
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WF 669

Query: 297  RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD-MRERGIVPDTYCYNALIKGFCD 355
                ++ + PD V    ++ GL + G++ DA+ +  D M +     +   +  L+ G   
Sbjct: 670  FHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTI-LICGMCRNGMVDDAQKLFNKM-EKAGCFPSV 413
               +D+A     E+   + +    +F I L+  +C++     A ++F+K  +K G  P++
Sbjct: 730  EAEMDKAIIFAEELV-LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 414  GMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
              +N LI  L +    EKA  LF  M+ +G  P  F              +   ++  + 
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF--------------TFNMLLAVHG 834

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             +G I + +++  ++      PD ITYN +I+   K  N++ AL  F +L     RP   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 533  TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
            TYG LI+GL +V R E+A R+F +M   GC P+ A++  L                    
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL-------------------- 934

Query: 593  LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                          I  + + G+ E A Q    M  +     L  YTI +  LC  G+V 
Sbjct: 935  --------------INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980

Query: 653  EALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVF 693
            EAL  F+   E K+    P  +   ++I+GL K   ++ A+ ++
Sbjct: 981  EALYYFN---ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 167/318 (52%), Gaps = 1/318 (0%)

Query: 37   VIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS 95
            V+ K K     ++ F    K+  +  + AS + +I  LL+ +  +  W    ++++   +
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 96   VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
              +  F +L++ + K G   +  E + +M    C+PD   YN V++   +      AL  
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 156  YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            +Y++V  +  P   T+  LI+GL+K G+ E A+++ +EM+  G  PN   + I+I+G  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 216  INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            I   + A +LF +M + G  PD  +Y  L++  C   RVDEAL      +  G  P   +
Sbjct: 941  IGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIA 1000

Query: 276  YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            Y+ +I+GL +++R +EA A Y +M    I PD+  Y  ++  L  AG V+ A ++  +++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060

Query: 336  ERGIVPDTYCYNALIKGF 353
              G+ PD + YNALI+G+
Sbjct: 1061 LAGLEPDVFTYNALIRGY 1078



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 189/432 (43%), Gaps = 20/432 (4%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+  L    KV+D   +   M+++ I  D   Y  + K     G L Q  ++  ++ K  
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            + N +++  LI  + ++G   +A +++ +M   G  PS+  ++AL+  L K  + E   
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 434 LLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           +L  +ME +G  P ++              +    +     AG I +AY+I  ++ + G 
Sbjct: 248 VLLKEMEDLGLRPNVY--------------TFTICIRVLGRAGKIDEAYEIFRRMDDEGC 293

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD++TY  LI+  C  G +  A +LF +++  G +PD V Y TL++       + D F+
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG-DLDTFK 352

Query: 553 IF-GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDISGRDDESMKSIEEF 610
            F  QM  +G  P    +  L+   C+ R F  AF+ + +   + I          I   
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L+ G +E+A++ L  M+          Y I++    + G+  +A+  F  +     +   
Sbjct: 413 LRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +C   ++ L + G L  A  +F    +NG  L P    Y +    +SK  +   A +LL
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENG--LAPDSVTYNMMMKCYSKVGQVDEAVNLL 530

Query: 731 CRMKSVGYDLDA 742
             M   G + D 
Sbjct: 531 SEMIRNGCEPDV 542


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 265/575 (46%), Gaps = 52/575 (9%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPN 77
           E ALE L   +    V S++       V  +FF WA KR+  +   S    +I  L +  
Sbjct: 81  EKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEAR 140

Query: 78  GFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
            +   ++T+ E+ R+  VSV   V   L+    +     KAL  F + K   C+P    Y
Sbjct: 141 LYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTY 200

Query: 137 NAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           N+V+ +  ++        VY EM  + +C P+ +T+S LI+   K G+ + AI++ DEM 
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
              + P +  YT ++    ++ + ++A  LF +MK +GCSP    Y  L+ G  K  RVD
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVD 320

Query: 256 EALALLRSFEKDGFVP-------------RLG----------------------SYSCLI 280
           EA    +   +DG  P             ++G                      SY+ +I
Sbjct: 321 EAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVI 380

Query: 281 DGLFRAKRY-DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             LF +K +  E  +W+ KM  + + P    Y ++I G  +  +V+ A+ LL +M E+G 
Sbjct: 381 KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y +LI         + A  L  E+ +     ++  + ++I    + G + +A  
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LFN+M+  G  P V  +NAL+ G+ KAG + +AN L  KME            + G R  
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME------------ENGCRA- 547

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  S   ++  +   G+  +A ++   +  SG  PD +TYN+L+  F   G    A ++ 
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +E++ KG   D++TY ++++ +  VD E+D    F
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 225/475 (47%), Gaps = 49/475 (10%)

Query: 4   TLNEVLTILDTVTPIEPA-LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           T+ EV  + +T   + PA L  L+  L +  + S  +           F  A  RK   +
Sbjct: 148 TIQEV--VRNTYVSVSPAVLSELVKALGRAKMVSKALSV---------FYQAKGRKCKPT 196

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            ++ ++VI ML++    +   +   E+   G+    +  +  LIS Y K+G  + A+  F
Sbjct: 197 SSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF 256

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK+   QP   IY  +L I F+      AL ++ EM +  C P + T++ LI GL K+
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A     +M + G+ P+      +++ L ++ R +E   +F +M    C+P  V+Y
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376

Query: 242 NA------------------------------------LLNGFCKLRRVDEALALLRSFE 265
           N                                     L++G+CK  RV++AL LL   +
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMD 436

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + GF P   +Y  LI+ L +AKRY+ A   ++++ E        +Y VMI+   + GK+ 
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A+ L ++M+ +G  PD Y YNAL+ G    G++++A SL  ++ +     + ++  I++
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            G  R G+   A ++F  ++ +G  P    +N L+     AG  E+A  +  +M+
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/547 (21%), Positives = 231/547 (42%), Gaps = 58/547 (10%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           TY  +I  L +     E YR   ++ +++  S      + L+    + + V +AL++   
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
            +     P   +Y+ +I  L +  ++++ +  Y +M  E    PD + Y  +I    + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +   A++L  +M++  + P    Y  L+  +  +G +++A  L  E+ +    P  +T+T
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G+ + G VD+A   +  M + G  P V   N L++ L K G +E+   +F +M + 
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367

Query: 443 K-NPTLFLRLSQGGNRVHDKASLQTMVEQ-YCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +  PT+               S  T+++  + +   + +      ++      P   TY+
Sbjct: 368 RCTPTV--------------VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+G+CK   +  AL L +E+  KG  P    Y +LIN L +  R E A  +F ++ +N
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKEN 473

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
               S  VY  +                                  I+ F + G++  A+
Sbjct: 474 FGNVSSRVYAVM----------------------------------IKHFGKCGKLSEAV 499

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIH 678
               EM  + +   +  Y   + G+ + G + EA ++   + E  C+A +   + +  ++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII--LN 557

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           G  + G    A+++F     +G  ++P    Y      F+       A  ++  MK  G+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSG--IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615

Query: 739 DLDACLY 745
           + DA  Y
Sbjct: 616 EYDAITY 622


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 160/583 (27%), Positives = 261/583 (44%), Gaps = 60/583 (10%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAA+++      S  
Sbjct: 63  ILKIFKWGPDAEKALEVLMMKVDHWLVREVMKTDVGVSVKMQFFRWAARKRNYEHDTSTY 122

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVV-----SDVFFVLISGYYKVGDCEKALESF 121
            A+I  L     +   W+ + E+    V VV     SD+  +L  G  K+    KA+  F
Sbjct: 123 MALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRML--GNAKM--ISKAVAIF 178

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSK 180
            ++K   CQP  + YN+++ +   +  +     +Y EM  +  C P+ VT+S LI+   K
Sbjct: 179 YQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCK 238

Query: 181 SGKTEVAIKMLDEMTQRGILPNK-----------------------------------FT 205
            G+ + AI +L+EM   G+ P                                     FT
Sbjct: 239 LGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFT 298

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I GL +  R DEAY  F +M+  GC PD V  N ++N   K  R+D+A+ L    E
Sbjct: 299 YTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEME 358

Query: 266 KDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
               +P + +Y+ +I  LF +K R  E  +W+ +M    I P    Y ++I G  +  + 
Sbjct: 359 TLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRT 418

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++
Sbjct: 419 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVM 478

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I  + + G +DDA  LF++M + GC P+V  +NAL+ GL +AG L++A     +M     
Sbjct: 479 IKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM----- 533

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                   Q    + D  S   ++      G   +A  +L  + +S   PD ++YN+++ 
Sbjct: 534 --------QDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLG 585

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                G    A KL KE+   G   D +TY +++  + +VD+E
Sbjct: 586 ALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQE 628



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 208/485 (42%), Gaps = 23/485 (4%)

Query: 97  VSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V D  F+ I   +K G D EKALE    M + D      +    + ++ + Q F  A   
Sbjct: 55  VMDERFIRILKIFKWGPDAEKALEVL--MMKVDHWLVREVMKTDVGVSVKMQFFRWAAR- 111

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVISGLC 214
                K N   +  T+  LI  L    +     KM+ EM +  + +      + +I  L 
Sbjct: 112 -----KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLG 166

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG-FVPRL 273
                 +A  +F ++K   C P   AYN+++         ++   L      +G   P  
Sbjct: 167 NAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDT 226

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +YS LI    +  R D A     +M +  ++P   +Y +++  L +   V  A+ L  +
Sbjct: 227 VTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEE 286

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR +   PD + Y  LI+G    G LD+A +   E+ +    P+T     +I  + + G 
Sbjct: 287 MRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGR 346

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +DDA KLF +ME   C PSV  +N +I  L ++           K  + +  + F R+ +
Sbjct: 347 LDDAIKLFEEMETLRCIPSVVTYNTIIKALFES-----------KSRVSEISSWFERM-K 394

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G        +   +++ +C      KA  +L ++ E G  P    Y SLI+   K    +
Sbjct: 395 GSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 454

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GCTP+   Y +LM
Sbjct: 455 LANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALM 514

Query: 574 TWSCR 578
           +   R
Sbjct: 515 SGLAR 519



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 177/405 (43%), Gaps = 57/405 (14%)

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK------RDSL----PNTHTFTIL 384
           R+R    DT  Y ALI+  C L +++Q      E+WK      R+ +    P   +  I 
Sbjct: 111 RKRNYEHDTSTYMALIR--C-LEVVEQYG----EMWKMIQEMVRNPVCVVTPMELSDIIR 163

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           + G  +  M+  A  +F +++   C P+   +N++I  L   GE EK + L+ +M     
Sbjct: 164 MLGNAK--MISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEM----- 216

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                  S  G    D  +   ++  +C  G    A  +L ++ ++G  P    Y  L+ 
Sbjct: 217 -------SNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMA 269

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
              K+ N++GAL LF+E++ +  RPD  TY  LI GL +  R ++A+  F +M + GC P
Sbjct: 270 LLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRP 329

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
              +  +++ +  +  +   A  L+          + E+++ I   +    +   I+ L 
Sbjct: 330 DTVLMNNMINFLGKAGRLDDAIKLF---------EEMETLRCIPSVVTYNTI---IKALF 377

Query: 625 EMDFKLNDFQ----------LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           E   ++++            ++P    Y+I + G C+  + ++A+ +   + E      P
Sbjct: 378 ESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCP 437

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            +   LI  L K    DLA ++F    +N      RV   +++ L
Sbjct: 438 AAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHL 482


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 288/588 (48%), Gaps = 34/588 (5%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK---MLDEMTQRGILPNKFTYTIVIS 211
           V   M +L+C+P++ + ++L+ GL    +++ A++   M+ +    G  P+  +YT VI+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +   + +AY  + +M D   SPD V Y++++   CK + +D+A+ +L S  K+G +P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD-----VVLYGVMIRGLSEAGKVKD 326
              +Y+ ++ G   + +  EA  + +K+  + +EPD     +  Y  +++G +  G +  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
              LL  M   GI PD Y YN LI  +   G +D+A  +  ++ ++   P+  T+  +I 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGK 443
            +C++G V+DA   F +M   G  P   ++N+LI GLC   + E+A  L  +M    I  
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           N   F                 ++++ +C  G + ++ K+   +   G  PDIITY++LI
Sbjct: 445 NTIFF----------------NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G+C  G ++ A+KL   +   GL+P++VTY TLING  ++ R  DA  +F +M  +G +
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN----A 619
           P    Y  ++    + R+ + A  L+++     +  +  +   I   L K ++ +     
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRM 608

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            Q L  MD KL   +   + I +  L + G+  EA ++F        +    +   +   
Sbjct: 609 FQNLCLMDLKL---EARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAEN 665

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           +  +G L+    +FL    NG  +   + N+++R LL   +  +   Y
Sbjct: 666 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 713



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 255/558 (45%), Gaps = 54/558 (9%)

Query: 90  RSGNVSVVSDVF--FVLISGYYKVGDCEKALESFGKMKEF---DCQPDVYIYNAVLNIAF 144
           R   +S + DVF   +L+ G       ++ALE    M +       PDV  Y  V+N  F
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           ++     A + Y+EM+     P++VT+S +I  L K    + A+++L  M + G++PN  
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGC-----SPDFVAYNALLNGFCKLRRVDEALA 259
           TYT ++ G C   +  EA     K++  G       PD   Y  LL G+     +    A
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           LL    ++G  P    Y+ LI    +  + DEA   + KM ++ + PD V YG +I  L 
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           ++G+V+DAM     M + G+ P    YN+LI G C     ++A  L +E+  R    NT 
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 447

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            F  +I   C+ G V +++KLF+ M + G  P +  ++ LIDG C AG++++A  L   M
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             +G  P              +  + +T++  YC    +  A  +  ++  SG  PDIIT
Sbjct: 508 VSVGLKP--------------NTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIIT 553

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN ++ G  +      A +L+  +   G + +  TY  +++GL +    +DA R+F    
Sbjct: 554 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF---- 609

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV-- 616
           QN C         LM      R F++     L+      GR+ E+      F   G V  
Sbjct: 610 QNLC---------LMDLKLEARTFNIMIDALLKV-----GRNGEAKDLFVAFSSNGLVPN 655

Query: 617 --------ENAI-QGLLE 625
                   EN I QGLLE
Sbjct: 656 YWTYRLMAENIIGQGLLE 673



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 262/573 (45%), Gaps = 27/573 (4%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC---SPDFVAY 241
           E A  + DE+ +RG   + +     ++ + + + A    R + +M  +G    +P    Y
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY-RKMF 300
             L+   C+  R+D   A L +  K GF     +++ L+ GL   KR  +A     R+M 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKL---LSDMRERGIVPDTYCYNALIKGFCDLG 357
           E    PDV    ++++GL +  + ++A++L   ++D R  G  PD   Y  +I GF   G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
              +A S   E+  R   P+  T++ +I  +C+   +D A ++   M K G  P+   + 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           +++ G C +G+ ++A     K+   G  P              D A+  T+++ Y T G 
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPD---------GLEPDIATYCTLLQGYATKGA 321

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +   + +L  +  +G  PD   YN LI  + K G ++ A+ +F +++ +GL PD+VTYG 
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RD 595
           +I  L +  R EDA   F QM   G +P   VY SL+   C   K+  A  L L+ L R 
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEA 654
           I          I+   ++G V  + + L ++  ++     +  Y+  + G C  G++ EA
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIES-EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 500

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LL 712
           + + S +V         +   LI+G CK   +  A+ +F     +G  + P +  Y  +L
Sbjct: 501 MKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG--VSPDIITYNIIL 558

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + L  ++  +   A  L  R+   G  ++   Y
Sbjct: 559 QGLFQTR--RTAAAKELYVRITESGTQIELSTY 589



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 230/540 (42%), Gaps = 53/540 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV +   K  +    +  +     R+      + S++I+ L K    D   + L  
Sbjct: 197 VSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTS 256

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK----EFD-CQPDVYIYNAVLNIA 143
           +    V      +  ++ GY   G  ++A+    K++    E D  +PD+  Y  +L   
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             K   +   A+   MV+    P+   +++LI   +K GK + A+ +  +M Q+G+ P+ 
Sbjct: 317 ATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDA 376

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  VI  LC+  R ++A   F +M D G SP  + YN+L++G C   + + A  L+  
Sbjct: 377 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G       ++ +ID   +  R  E+   +  M    ++PD++ Y  +I G   AGK
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 496

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           + +AMKLLS M   G+ P+T  Y  LI G+C +  +  A  L  E+      P+  T+ I
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           ++ G+ +      A++L+ ++ ++G    +  +N ++ GLCK                  
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK------------------ 598

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                       N++ D A    M +  C           LM L          T+N +I
Sbjct: 599 ------------NKLTDDA--LRMFQNLC-----------LMDLKLEAR-----TFNIMI 628

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +   KVG    A  LF      GL P+  TY  +   +      E+  ++F  M  NGCT
Sbjct: 629 DALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 688



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 5/220 (2%)

Query: 88  ELRSGNVSVV----SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +L SG VSV     +  +  LI+GY K+     AL  F +M+     PD+  YN +L   
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGL 561

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F+ +    A  +Y  + +      + T++++++GL K+  T+ A++M   +    +    
Sbjct: 562 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 621

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+ I+I  L ++ R  EA  LF+    +G  P++  Y  +         ++E   L  S
Sbjct: 622 RTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 681

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            E +G     G  + ++  L +      A   Y  M +EK
Sbjct: 682 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEK 720



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 114/256 (44%), Gaps = 20/256 (7%)

Query: 67  SAVISMLLKPNGFDLYWQTL-----------------DELRSGNVSVVSDVFFVLISGYY 109
           S ++S+ LKPN   + ++TL                  E+ S  VS     + +++ G +
Sbjct: 505 SGMVSVGLKPN--TVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLF 562

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      A E + ++ E   Q ++  YN +L+   + +L   AL ++  +  ++      
Sbjct: 563 QTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEAR 622

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF+++I+ L K G+   A  +    +  G++PN +TY ++   +      +E  +LFL M
Sbjct: 623 TFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 682

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +D+GC+ D    N ++    +   +  A   L   ++  F     + S  ID L    +Y
Sbjct: 683 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKY 741

Query: 290 DEAYAWYRKMFEEKIE 305
            E + +  + ++  IE
Sbjct: 742 QEYHRFLPEKYKSFIE 757


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 234/466 (50%), Gaps = 21/466 (4%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           ++  D +  ++    K G   +ALE F  MK   C P +  YN ++N       F  AL 
Sbjct: 7   AIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALD 66

Query: 155 VYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           ++  M +   + P+  T++ LI+GL  SG TE A K+L EM  + I  N FTY+ +I  L
Sbjct: 67  LFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSL 126

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            +  + +E+Y++  +M  +GC+PD  A+N ++ GF +   +++A  + +   + G+ P  
Sbjct: 127 VKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDN 186

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--PDVVLYGVMIRGLSEAGKVKDAMKLL 331
            SY  LI GL +  + DE+     +M        P+V+ +  +I GL   G+++ A+++ 
Sbjct: 187 VSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 246

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M E G  P+ Y Y  LI G C    + QAR L  ++ +    P+   +  LI G C+ 
Sbjct: 247 GSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKR 306

Query: 392 GMVDDAQKLFNKME-KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           G +D+A+KL+ +M   AG  P++  FN LIDG CK G+L +AN L  +M           
Sbjct: 307 GSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM----------- 355

Query: 451 LSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
               G +    D  + + ++     A  + +A ++  Q+ E   L D ++  S + G CK
Sbjct: 356 ----GTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCK 411

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            GNI+ A  +F+  +  G  P+  T+  L   L ++ R EDA ++ 
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 230/472 (48%), Gaps = 19/472 (4%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M K  C      +  ++  L+K+G    A+++ + M     +P+  TY ++I+  C    
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 219 ADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             +A  LF  MK +    PD   YN L++G C     + A  LL           + +YS
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +I  L +  + +E+Y    +M      PDV  +  +++G + +  ++ A ++   M E 
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVD 395
           G  PD   Y+ LI G   +G LD++  +  E+  R +  +PN  TF+ LI G+CR G ++
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A ++F  M +AGC P+   +  LI GLC+A ++ +A  LF KM     P          
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPP--------- 291

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNING 514
               D  +  +++  YC  G + +A K+  +++    L P I+T+N+LI+GFCK+G +  
Sbjct: 292 ----DAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +L  E+  KGL  D+ TY  LI GL R  + ++A  ++ QM +      P    S + 
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 407

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLE 625
             C+      A++++    +  +  + E+ + + E L K G VE+A Q L+E
Sbjct: 408 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA-QKLME 458



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 219/452 (48%), Gaps = 28/452 (6%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y  ++  L +A    +A   +  M  E   P +V Y V+I     AG+   A+ L   M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 335 -RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            RE+ + PD + YN LI G C  G  + AR L  E+  ++   N  T++ +I  + +   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
            +++ K+  +M  AGC P V  FN ++ G  ++  +EKA  ++  M E G  P       
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP------- 184

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA--ESGNLPDIITYNSLINGFCKVG 510
                  D  S   ++      G + ++ KIL ++A   +G +P++IT+++LI+G C+ G
Sbjct: 185 -------DNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  AL++F  +   G +P+  TY TLI GL R ++   A  +F +M Q    P    Y 
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRD--DESMKS----IEEFLQKGEVENAIQGLL 624
           SL+   C+R     A  L+    R++SG      ++ +    I+ F + G++  A + + 
Sbjct: 298 SLIAGYCKRGSMDEAEKLY----REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 353

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           EM  K        Y I + GL +  ++ EAL ++  + E K ++ P SCV  + GLCK G
Sbjct: 354 EMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 413

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            +D A  VF  T K+G +  P     L  SL+
Sbjct: 414 NIDQAYAVFEATRKSGAVPNPETFRILSESLI 445



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 183/373 (49%), Gaps = 3/373 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS L      +   + L E+R  N++     +  +I    K    E++ +   +M  
Sbjct: 85  NTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA 144

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PDV+ +N V+    R      A  VY  MV+    P+ V++ +LI+GL+K GK + 
Sbjct: 145 AGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE 204

Query: 187 AIKMLDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++K+L EM  R  G +PN  T++ +I GLC+    ++A  +F  M ++GC P+   Y  L
Sbjct: 205 SLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 264

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEK 303
           + G C+  +V +A  L     +    P   +Y+ LI G  +    DEA   YR+M     
Sbjct: 265 IAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 324

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++P +V +  +I G  + GK+  A +L+++M  +G+  DT  Y  LI G      LD+A 
Sbjct: 325 LQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEAL 384

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  ++ ++  L +  +    + G+C+ G +D A  +F    K+G  P+   F  L + L
Sbjct: 385 EVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 444

Query: 424 CKAGELEKANLLF 436
            K G +E A  L 
Sbjct: 445 IKLGRVEDAQKLM 457



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 165/357 (46%), Gaps = 42/357 (11%)

Query: 59  RLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           R ++ A+N    S++I  L+K    +  ++ L+E+ +   +     F  ++ G+ +  + 
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNM 167

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFS 172
           EKA E +  M E   +PD   Y+ +++   +      +L +  EM       +PN++TFS
Sbjct: 168 EKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFS 227

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            LI+GL ++G+ E A+++   M + G  PNK+TYT +I+GLC+  +  +A  LF KM  +
Sbjct: 228 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287

Query: 233 GCSPDFVAYNALL------------------------------------NGFCKLRRVDE 256
              PD VAYN+L+                                    +GFCKL ++  
Sbjct: 288 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 347

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L+      G      +Y  LI GL RA + DEA   Y++M E+K   D V     + 
Sbjct: 348 ANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 407

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           GL + G +  A  +    R+ G VP+   +  L +    LG ++ A+ L      RD
Sbjct: 408 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 263/582 (45%), Gaps = 58/582 (9%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAAK++  +   S  
Sbjct: 67  ILKIFKWGPDAERALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTY 126

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV----FFVLISGYYKVGDCEKALESFG 122
            A+I  L     +   W+ + E+    + VV+ +       ++     +G   KA+  F 
Sbjct: 127 MALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIG---KAITIFY 183

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKS 181
           ++K   CQP    YN+++ +   +  +     +Y EM  + +C P+ VT+S LI+   K 
Sbjct: 184 QIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKL 243

Query: 182 GKTEVAIKMLDEMTQRGILPNK-----------------------------------FTY 206
           G+ + AI++L+EM + G+ P                                     FTY
Sbjct: 244 GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY 303

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T +I GL +  R DEAY  + +M+  GC PD V  N ++N   K  R+D+ L L      
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGV 363

Query: 267 DGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
              +P + +Y+ +I  LF +K R  E ++W+ +M    I P    Y ++I G  +  +++
Sbjct: 364 SHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIE 423

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++I
Sbjct: 424 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 483

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             + + G +DDA  LF++M K GC P+V  +NAL+ GL +A  L++A     KM      
Sbjct: 484 KHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM------ 537

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  Q    + D  S   ++      G  H+A ++L  +  S   PD ++YN++++ 
Sbjct: 538 -------QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSA 590

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
               G    A +L KE+   G   D +TY +++  + +VD+E
Sbjct: 591 LSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQE 632



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 207/492 (42%), Gaps = 23/492 (4%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           R  N   V D  F+ I   +K G D E+ALE    M   D      +    + +  + Q 
Sbjct: 52  RYTNSVRVLDERFIRILKIFKWGPDAERALEVL--MLRVDHWLVREVMKTDVGVNVKMQF 109

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYT 207
           F  A        K N   +  T+  LI+ L    +     KM+ EM +  I +      +
Sbjct: 110 FRWAAK------KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELS 163

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI  L       +A  +F ++K   C P   AYN+++       + ++   L      +
Sbjct: 164 QVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNE 223

Query: 268 GFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           G   P   +YS LI    +  R D A     +M E  ++P   +Y ++I    +   V  
Sbjct: 224 GHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHG 283

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+ L  +MR     PD + Y  LI+G    G +D+A     E+ +    P+T     +I 
Sbjct: 284 ALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMIN 343

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
            + + G +DD  KLF +M  + C P+V  +N +I  L ++           K  + +  +
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES-----------KSRVSEVFS 392

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            F R+ +G        +   +++ +C    I KA  +L ++ E G  P    Y SLI+  
Sbjct: 393 WFERM-KGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 451

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K    + A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GCTP+ 
Sbjct: 452 GKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNV 511

Query: 567 AVYKSLMTWSCR 578
             Y +LM+   R
Sbjct: 512 YAYNALMSGLAR 523



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 151/343 (44%), Gaps = 50/343 (14%)

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
           M+  A  +F +++   C P+   +N++I  L   G+ EK + L+ +M            S
Sbjct: 174 MIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEM------------S 221

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             G+   D  +   ++  +C  G    A ++L ++ E+G  P    Y  +I+ F K+ N+
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           +GAL LF+E++    RPD  TY  LI GL +  R ++A+  + +M + GC P   V  ++
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNM 341

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA------IQGLLEM 626
           + +  +                  +GR D+ +K  EE      + N       I+ L E 
Sbjct: 342 INFLGK------------------AGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383

Query: 627 DFKLNDF----------QLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
             ++++            ++P    Y+I + G C+  ++++A+ +   + E      P +
Sbjct: 384 KSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA 443

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
              LI  L K    DLA ++F    +N      RV   +++ L
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL 486


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 221/444 (49%), Gaps = 18/444 (4%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           S++ D+   L+  Y K G+ + ALE F +  ++  +      N +L    ++    +  +
Sbjct: 159 SIIVDM---LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVES 215

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY EM++     N+VTF ++INGL K GK + A  ++++M   G  P+  TY  +I G C
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  +  +A  L  +M      P+ + +N L++GFC+   V  A  +    ++ G  P + 
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LI+GL    + DEA     KM    ++P+VV Y  +I G  +   +K+A ++L D+
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            +RG+ P+   +N LI  +   G +D A  L+  +      PN  T+  LI G CR G V
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQ 453
            +A+KL  +ME  G    +  +N L+D LCK GE  KA  L  +M E+G NP+       
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHL----- 510

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   +++ Y   G    A  +   + + G   +I+TYN LI GFC  G + 
Sbjct: 511 ---------TYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE 561

Query: 514 GALKLFKELQLKGLRPDSVTYGTL 537
            A +L  E+  KGL P+  TY  L
Sbjct: 562 EANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 190/381 (49%), Gaps = 1/381 (0%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           RL + + N  ++S L+K     +      E+    + V    F V+I+G  KVG  +KA 
Sbjct: 191 RLSALSCNPMLVS-LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           +    MK +   P V  YN +++   +      A A+  EMV     PN +TF++LI+G 
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            +      A K+ +EM ++G+ PN  TY  +I+GLC   + DEA  L  KM   G  P+ 
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YNAL+NGFCK + + EA  +L    K G  P + +++ LID   +A R D+A+     
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M +  + P+V  Y  +I G    G VK+A KL  +M   G+  D   YN L+   C  G 
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
             +A  L  E+++    P+  T+  LI G  R G    A  +   MEK G   ++  +N 
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549

Query: 419 LIDGLCKAGELEKANLLFYKM 439
           LI G C  G+LE+AN L  +M
Sbjct: 550 LIKGFCNKGKLEEANRLLNEM 570



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 207/428 (48%), Gaps = 22/428 (5%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N +   +L+    K+G+ ++A++  D     G   +  +   ++  L +  R      ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M       + V ++ ++NG CK+ +  +A  ++   +  GF P + +Y+ +IDG  +A
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            +  +A A  ++M  ++I P+ + + ++I G      V  A K+  +M+ +G+ P+   Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N+LI G C  G LD+A  LQ ++      PN  T+  LI G C+  M+ +A+++ + + K
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL---------FLRLS---- 452
            G  P+V  FN LID   KAG ++ A LL   M + G  P +         F R      
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 453 --------QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                   +G     D  +   +V+  C  G   KA ++L ++ E G  P  +TYN+LI+
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALID 517

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+ + GN   AL +   ++ KG R + VTY  LI G     + E+A R+  +M + G  P
Sbjct: 518 GYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 577

Query: 565 SPAVYKSL 572
           +   Y  L
Sbjct: 578 NRTTYDIL 585



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 190/374 (50%), Gaps = 2/374 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           VI+ L K   F      ++++++   S     +  +I GY K G   KA     +M    
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P+   +N +++   R +    A  V+ EM +    PN+VT++ LINGL  +GK + A+
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + D+M+  G+ PN  TY  +I+G C+     EA  +   +   G +P+ + +N L++ +
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 249 CKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            K  R+D+A  LLRS   D G  P + +Y+CLI G  R     EA    ++M    ++ D
Sbjct: 415 GKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKAD 473

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y +++  L + G+ + A++LL +M E G+ P    YNALI G+   G    A +++ 
Sbjct: 474 LVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRT 533

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + K+    N  T+ +LI G C  G +++A +L N+M + G  P+   ++ L D + + G
Sbjct: 534 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593

Query: 428 ELEKANLLFYKMEI 441
            +   +   Y + I
Sbjct: 594 FIPDIDGHLYNVSI 607



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 207/421 (49%), Gaps = 32/421 (7%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYD 290
           GC+   +  + L+  + K   +D AL         GF  RL + SC  ++  L +  R  
Sbjct: 155 GCANSIIV-DMLVWAYVKNGEMDLALEGFDRAGDYGF--RLSALSCNPMLVSLVKEGRIG 211

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
              + Y++M   +I  +VV + V+I GL + GK + A  ++ DM+  G  P    YN +I
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G+C  G + +A +L  E+  +   PN  TF ILI G CR+  V  A+K+F +M++ G  
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL-------------------R 450
           P+V  +N+LI+GLC  G+L++A  L  KM  +G  P +                      
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 451 LSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           L   G R    +  +  T+++ Y  AG +  A+ +   + ++G  P++ TYN LI GFC+
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            GN+  A KL KE++  GL+ D VTY  L++ L +      A R+  +M + G  PS   
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENAIQGLLE 625
           Y +L+    R    + A +  ++ L +  GR    +     I+ F  KG++E A + L E
Sbjct: 512 YNALIDGYFREGNSTAALN--VRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 569

Query: 626 M 626
           M
Sbjct: 570 M 570



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 175/394 (44%), Gaps = 20/394 (5%)

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N ++      G +    S+  E+ +R    N  TF ++I G+C+ G    A  +   M+ 
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQ 465
            G  PSV  +N +IDG CKAG++ KA+ L  +M                 R+H ++ +  
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV--------------AKRIHPNEITFN 303

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++ +C    +  A K+  ++   G  P+++TYNSLING C  G ++ AL L  ++   
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+P+ VTY  LING  +    ++A  +   + + G  P+   + +L+    +  +   A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           F L    + D     + S  +  I  F ++G V+ A +   EM+       L  Y I + 
Sbjct: 424 F-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
            LC+ G+ ++A+ +   + E     +  +   LI G  + G    A++V     K G   
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG--R 540

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           R  +  Y +    F    K   A  LL  M   G
Sbjct: 541 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 574


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 249/509 (48%), Gaps = 34/509 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI+ L +    +  +    E++S  V+     + +LI  + K G  E+A   F +
Sbjct: 289 STYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 348

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C  +V  Y A+L+   + +    A  ++  M+   C PN +T+S L++GL K+G+
Sbjct: 349 MRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGE 408

Query: 184 ----TEVAIKMLDEMTQRG------------ILPNKFTYTIVISGLCQINRADEAYRLFL 227
                EV  K++      G            I PN  TY  +I GLC+ ++  +A  L  
Sbjct: 409 IQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 468

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  +GC P+ + Y+AL++GFCK+ ++D A  +     K G++P + +Y+ LID +F+ +
Sbjct: 469 AMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDR 528

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     +M E    P+VV Y  MI GL   G+ + A+KLLS M E+G  P+   Y 
Sbjct: 529 RLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYT 588

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ALI G    G +D +  L +++  +   PN  T+ +LI   C  G++D+A  L ++M++ 
Sbjct: 589 ALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 648

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
                +  + +++ G             F K  I     L    S G   +     L  +
Sbjct: 649 YWPKYLQGYCSVVQG-------------FSKKFIASLGLLEELESHGTVPIAPVYGL--L 693

Query: 468 VEQYCTAGLIHKA---YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
           ++ +  AG + +A   +K +M+L+ S N+     Y SLI   C    +  A +L+ E+  
Sbjct: 694 IDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITR 753

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           KG+ P+   +  LI GL +V++  +A ++
Sbjct: 754 KGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 175/699 (25%), Positives = 296/699 (42%), Gaps = 108/699 (15%)

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           D + D  +   +++      LF  A++  + M   +C+PN+VT+  L+ G  K  +    
Sbjct: 102 DFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWC 161

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            ++++ M + G  PN   +  ++   C       AY+L  +M D GC P +VAYN  +  
Sbjct: 162 KRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGS 221

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK---------RYDEAYAWYRK 298
            C    +     LL   EK      + + SC+++ +  A          ++D A+   + 
Sbjct: 222 ICGGEELPSP-DLLALAEK--VYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKV 278

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +   PD   Y  +I  L EA KV+ A  L  +M+  G+ PD Y Y  LI  FC  GL
Sbjct: 279 MMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGL 338

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++QARS   E+       N  T+T L+    +   +  A  +FN+M  AGC P+   ++A
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398

Query: 419 LIDGLCKAGELEKANLLFYKM-------------------EIGKNPTLFLRLSQGGNRVH 459
           L+DGLCKAGE++KA  ++ K+                    I  N   +  L  G  + H
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458

Query: 460 DKASLQ-------------------TMVEQYCTAGLIHKA-------------------- 480
                Q                    +++ +C  G I  A                    
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYT 518

Query: 481 ---------------YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
                           K+L Q+ ES   P+++TY ++I+G C++G    ALKL   ++ K
Sbjct: 519 SLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK 578

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G  P+ VTY  LI+GL +  + + + ++F QM   GC P+   Y+ L+   C       A
Sbjct: 579 GCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEA 638

Query: 586 FSL--------WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            SL        W +YL+           S+ +   K  +  A  GLLE         +AP
Sbjct: 639 HSLLSEMKQTYWPKYLQGYC--------SVVQGFSKKFI--ASLGLLEELESHGTVPIAP 688

Query: 638 -YTIWLIGLCQDGQVKEALNIFSVLVECKA---IVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            Y + +    + G+++EAL +   ++E  +   I +      LI  LC    L+ A +++
Sbjct: 689 VYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELY 748

Query: 694 LYTLKNGFILRPRVCNYLLRSLL-FSKDNKKVHAYHLLC 731
               + G +    V   L++ L+  +K N+ +   + +C
Sbjct: 749 SEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSIC 787



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 251/597 (42%), Gaps = 101/597 (16%)

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           E+   G  P+  TY  ++  L    + D  +R+  +M +SG   D           CK  
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           R  +AL ++   E++ F  +L +  C  +I GL  A  +DEA ++  +M      P+VV 
Sbjct: 90  RWSDALVMI---EREDF--KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC---------------- 354
           Y  ++ G  +  ++    ++++ M + G  P+   +N+L+  +C                
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204

Query: 355 DLG-------------------------LLDQARSLQVEIWKRDSL---PNTHTFTILIC 386
           D G                         LL  A  +  E+     +    NT  F   +C
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 264

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNP 445
           GM   G  D A ++   M   G  P    ++ +I  LC+A ++EKA LLF +M+ +G NP
Sbjct: 265 GM---GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNP 321

Query: 446 TLFL------RLSQGGNRVHDKASLQTMVEQYCTA------GLIH---------KAYKIL 484
            ++          + G     ++    M    C+A       L+H         +A  I 
Sbjct: 322 DVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIF 381

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL----------------QLKGLR 528
            ++ ++G  P+ ITY++L++G CK G I  A +++ +L                    + 
Sbjct: 382 NRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P+ VTYG LI+GL +  +  DA  +   M  NGC P+  +Y +L+   C+  K   A  +
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 589 WLQ-----YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           +L+     YL  +          I+   +   ++ A++ L +M        +  YT  + 
Sbjct: 502 FLRMSKCGYLPTV----HTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           GLC+ G+ ++AL + S++ E        +   LI GL K G +DL++ +F+     G
Sbjct: 558 GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 43/335 (12%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           + K  N Q     F+  +K   L +  + +++I  + K    DL  + L ++   + +  
Sbjct: 492 VGKIDNAQ---EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPN 548

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
              +  +I G  ++G+C+KAL+    M+E  C P+V  Y A+++   +     L+L ++ 
Sbjct: 549 VVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFI 608

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M    C PN VT+ +LIN    +G  + A  +L EM Q         +   + G C + 
Sbjct: 609 QMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT-------YWPKYLQGYCSVV 661

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +              G S  F+A                +L LL   E  G VP    Y 
Sbjct: 662 Q--------------GFSKKFIA----------------SLGLLEELESHGTVPIAPVYG 691

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV---LYGVMIRGLSEAGKVKDAMKLLSDM 334
            LID   +A R +EA   +++M E     ++    +Y  +I+ L  A +++ A +L S++
Sbjct: 692 LLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEI 751

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
             +G+VP+   +  LIKG   +   ++A  L   I
Sbjct: 752 TRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 230/487 (47%), Gaps = 27/487 (5%)

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGK 183
           + F  QP    YN VL++  R      ALA+Y  MV  + +P    TF +    L + G+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A+ +L  M + G +P+   Y  VI  LC      EA  L  +M   GC+ D   ++ 
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           ++ G C L RV EA  L+      G +P + +Y  L+ GL R ++ DEA    R M    
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRV 306

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            E +VVL+  +I G    GK+ +A +L   M  +G  PD + Y+ L+ G C LG +  A 
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+ K+   PN  T+TI++   C+NGM DD + L  +M   G   +   +N +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 424 CKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVHDKASLQTMVEQYCTAG- 475
           CK G +++A  L  +M   G NP      T+   L         +   + ++E+   A  
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 476 -----LIHK---------AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                +IH          A ++  ++   G   D+++YN LI   CK GN++ +L L +E
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  KG++P++V+Y  LI+ L +  R  DA  +  QM   G  P    Y +L+   C+   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 582 FSLAFSL 588
              A +L
Sbjct: 607 MHAALNL 613



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 244/525 (46%), Gaps = 53/525 (10%)

Query: 62  SFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           SF S + V+S+L + +       LY + +   R   V   +  F V      ++G   +A
Sbjct: 138 SFRSYNVVLSVLARADCHADALALYRRMVHRDR---VPPTTFTFGVAARALCRLGRANEA 194

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L     M    C PD  +Y  V++    +     A  +  EM+ + C  ++ TF  ++ G
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA--------------- 222
           +   G+   A +++D M  +G +P   TY  ++ GLC++ +ADEA               
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLF 314

Query: 223 ----------------YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
                             L+  M   GC PD   Y+ L++G CKL R+  A+ LLR  EK
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            GF P + +Y+ ++    +   +D+  A   +M  + +  +   Y  MI  L + G++ +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM L+ +MR +G  PD   YN +I   C+   +++A  +   + +   + N  T+  +I 
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
            + R+G   DA +L  +M   GC   V  +N LI  +CK G ++++ +L  +M E G  P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +  S   ++ + C    +  A ++  Q+   G  PDI+TYN+LING
Sbjct: 555 --------------NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            CK+G ++ AL L ++L  + + PD +TY  LI+   +V   +DA
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 3/370 (0%)

Query: 87  DELRS--GNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           DE R+  G V  ++ V F  +I G    G   +A E +  M    CQPD + Y+ +++  
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      A+ +  EM K    PN+VT++++++   K+G  +    +L+EM+ +G+  N 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             Y  +I  LC+  R DEA  L  +M+  GC+PD  +YN ++   C   +++EA  +  +
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             ++G V    +Y+ +I  L R  R+ +A    ++M       DVV Y  +I+ + + G 
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V  ++ LL +M E+GI P+   YN LI   C    +  A  L  ++  +   P+  T+  
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G+C+ G +  A  L  K+      P +  +N LI   CK   L+ A +L  +     
Sbjct: 597 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 656

Query: 444 NPTLFLRLSQ 453
            P    R+ Q
Sbjct: 657 CPVGDRRIMQ 666



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 211/476 (44%), Gaps = 25/476 (5%)

Query: 257 ALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVM 314
           AL LL    +  G  P   SY+ ++  L RA  + +A A YR+M   +++ P    +GV 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
            R L   G+  +A+ LL  M   G VPD   Y  +I   CD G + +A +L  E+     
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-- 432
             + +TF  ++ GMC  G V +A +L ++M   GC P V  +  L+ GLC+  + ++A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 433 --------NLLFYKMEIG---------KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
                   N++ +   IG         +   L+  +   G +  D  +   ++   C  G
Sbjct: 302 MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP-DAHTYSILMHGLCKLG 360

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I  A ++L ++ + G  P+++TY  +++ FCK G  +    L +E+  KGL  +S  Y 
Sbjct: 361 RISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYN 420

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            +I  L +  R ++A  +  +M   GC P    Y +++   C   +   A  ++   L +
Sbjct: 421 GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEE 480

Query: 596 ISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               +  +  + I   L+ G  ++A++   EM        +  Y   +  +C+DG V  +
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRS 540

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           L +   + E        S   LI  LCK   +  A+++    L  G  L P +  Y
Sbjct: 541 LVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG--LAPDIVTY 594



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 140/349 (40%), Gaps = 39/349 (11%)

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN---PTLFLRLSQGGNRVHDKASL 464
           G  PS   +N ++  L +A +     L  Y+  + ++   PT F              + 
Sbjct: 134 GVQPSFRSYNVVLSVLARA-DCHADALALYRRMVHRDRVPPTTF--------------TF 178

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
                  C  G  ++A  +L  +A  G +PD + Y ++I+  C  G +  A  L  E+ L
Sbjct: 179 GVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL 238

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G   D  T+  ++ G+  + R  +A R+  +M   GC P    Y  L+   CR R+   
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADE 298

Query: 585 AFSLWLQYLRDISGRDDESM-----KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
           A        R + GR  E         I   L +G++  A +    M  K        Y+
Sbjct: 299 A--------RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 350

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYT 696
           I + GLC+ G++  A+ +   L E +     P+ V    ++H  CK G  D    +    
Sbjct: 351 ILMHGLCKLGRISSAVRL---LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM 407

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              G  L  +  N ++ +L   KD +   A  L+  M+S G + D C Y
Sbjct: 408 SAKGLTLNSQGYNGMIYAL--CKDGRMDEAMGLIQEMRSQGCNPDICSY 454


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 231/463 (49%), Gaps = 15/463 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +G    +    GK+ +   QP+  I N ++     K     +L  + ++V  
Sbjct: 50  ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQ 109

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               + V++ +L+NGL K G+T  AIK+L  +  R   P+   Y+ +I GLC+    DEA
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA 169

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           Y L+ +M   G  PD + Y  L+ GFC   ++ EA  LL         P + +Y+ LID 
Sbjct: 170 YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT 229

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  E+      M ++ ++PDVV+Y +++ G    G+V+ A ++   M + G+ PD
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y YN +I G C    +D+A +L  E+  ++ +P+T T++ LI G+C+ G +     L  
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTK 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G   ++  +N+L+DGLCK   L+KA  LF KM E G  P              +K
Sbjct: 350 EMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP--------------NK 395

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  C  G + K   +   L   G   D+ TY  +I+G CK G  + AL +  +
Sbjct: 396 YTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSK 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           ++  G  P++VT+  +I  L   D  + A ++  +M   G  P
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 226/458 (49%), Gaps = 13/458 (2%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  +  +L    + + +   +++  +M     +P++VT S+LIN     G+   +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L ++ + G  PN      ++ GLC      ++     K+   G   D V+Y  LLNG CK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           +     A+ LLR+ E     P +  YS +IDGL + K  DEAY  Y +M    I PDV+ 
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G   AG++ +A  LL++M  + I P+ Y YN LI   C  G + ++++L   + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K+   P+   ++IL+ G C  G V  A+++F  M + G  P V  +N +I+GLCK   ++
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A  L             LR     N + D  +  ++++  C  G I     +  ++   
Sbjct: 308 EAMNL-------------LREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   +++TYNSL++G CK  N++ A+ LF +++ +G++P+  TY  LI+GL +  R +  
Sbjct: 355 GQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKG 414

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             +F  +   G       Y  +++  C+   F  A ++
Sbjct: 415 QALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAM 452



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 227/446 (50%), Gaps = 19/446 (4%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD+   + ++N          + +V  +++KL   PN +  + L+ GL   G+ + ++  
Sbjct: 43  PDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHF 102

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D++  +G   ++ +Y I+++GLC+I     A +L   ++D    PD V Y+ +++G CK
Sbjct: 103 HDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCK 162

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            + VDEA  L       G  P + +Y+ LI G   A +  EA+    +M  + I P++  
Sbjct: 163 DKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYT 222

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I  L + GKVK++  LL+ M ++G+ PD   Y+ L+ G+C +G + +A+ + + + 
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMV 282

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +    P+ +++ I+I G+C+   VD+A  L  +M      P    +++LIDGLCK G + 
Sbjct: 283 QTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI- 341

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT---MVEQYCTAGLIHKAYKILMQL 487
                          T  L L++  +     A+L T   +++  C    + KA  + M++
Sbjct: 342 ---------------TTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  P+  TY +LI+G CK G +     LF+ L +KG   D  TY  +I+GL +    
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLM 573
           ++A  +  +M  NGC P+   ++ ++
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIII 472



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 230/502 (45%), Gaps = 49/502 (9%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+ L  +P I+ F  ++  L K       I +  +M  +GI+P+  T +I+I+  C + +
Sbjct: 1   MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              ++ +  K+   G  P+ +  N L+ G C    V ++L         GF     SY  
Sbjct: 61  MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++GL +      A    R + +    PDVV+Y  +I GL +   V +A  L S+M  RG
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I PD   Y  LI GFC  G L +A  L  E+  ++  PN +T+  LI  +C+ G V +++
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
            L   M K G  P V +++ L+DG C  GE++KA  +F  M + G NP ++         
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVY--------- 291

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                S   ++   C    + +A  +L ++     +PD +TY+SLI+G CK+G I   L 
Sbjct: 292 -----SYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILD 346

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L KE+  +G   + VTY +L++GL +    + A  +F +M + G  P+   Y +L+   C
Sbjct: 347 LTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLC 406

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +                   GR  +     +  L KG                    +  
Sbjct: 407 K------------------GGRLKKGQALFQHLLVKGYC----------------IDVWT 432

Query: 638 YTIWLIGLCQDGQVKEALNIFS 659
           YT+ + GLC++G   EAL + S
Sbjct: 433 YTVMISGLCKEGMFDEALAMKS 454



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 249/539 (46%), Gaps = 51/539 (9%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +P    +  ++  L ++        L  +M+  G  PD V  + L+N FC L ++  + +
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +L    K G+ P     + L+ GL       ++  ++ K+  +  + D V YG+++ GL 
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G+ + A+KLL  + +R   PD   Y+ +I G C   L+D+A  L  E+  R   P+  
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYK 438
           T+T LICG C  G + +A  L N+M      P++  +N LID LCK G++ E  NLL   
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + G  P              D      +++ YC  G + KA +I + + ++G  PD+ +
Sbjct: 247 TKKGVKP--------------DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYS 292

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN +ING CK   ++ A+ L +E+  K + PD+VTY +LI+GL ++ R      +  +M 
Sbjct: 293 YNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMH 352

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G   +   Y SL+   C+ +    A +L+++            MK           E 
Sbjct: 353 HRGQPANLVTYNSLLDGLCKNQNLDKAIALFMK------------MK-----------ER 389

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            IQ         N +    YT  + GLC+ G++K+   +F  L+     +   +   +I 
Sbjct: 390 GIQP--------NKYT---YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           GLCK G  D A+ +      NG I        ++RSLL   +N K  A  LL  M + G
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK--AEKLLHEMIAKG 495



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 186/353 (52%), Gaps = 4/353 (1%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRK 146
           E RS    VV  ++  +I G  K    ++A + + +M      PDV  Y  ++       
Sbjct: 142 EDRSTRPDVV--MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           QL + A  +  EM+  N  PNI T++ LI+ L K GK + +  +L  MT++G+ P+   Y
Sbjct: 200 QL-MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIY 258

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           +I++ G C +    +A ++FL M  +G +PD  +YN ++NG CK +RVDEA+ LLR    
Sbjct: 259 SILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH 318

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
              +P   +YS LIDGL +  R        ++M       ++V Y  ++ GL +   +  
Sbjct: 319 KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDK 378

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+ L   M+ERGI P+ Y Y ALI G C  G L + ++L   +  +    +  T+T++I 
Sbjct: 379 AIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G+C+ GM D+A  + +KME  GC P+   F  +I  L +  E +KA  L ++M
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEM 491



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 174/348 (50%), Gaps = 6/348 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K    D  +    E+ +  +      +  LI G+   G   + +E+FG + E
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG---QLMEAFGLLNE 210

Query: 127 F---DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
               +  P++Y YN +++   ++     +  +   M K    P++V +S+L++G    G+
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A ++   M Q G+ P+ ++Y I+I+GLC+  R DEA  L  +M      PD V Y++
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G CKL R+   L L +     G    L +Y+ L+DGL + +  D+A A + KM E  
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I+P+   Y  +I GL + G++K    L   +  +G   D + Y  +I G C  G+ D+A 
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           +++ ++     +PN  TF I+I  +      D A+KL ++M   G  P
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 189/755 (25%), Positives = 337/755 (44%), Gaps = 90/755 (11%)

Query: 90  RSGNVSVVSDVFFVL---ISGYYKVGDC--EKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           RS  V+  +D    L   I+G  + G    + AL+ F +M  +     V  +N +L +  
Sbjct: 3   RSRRVTAAADRCLELERVIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVS 62

Query: 145 RKQLFL---LALAVYYEMVK---LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           R +      L ++++  M++   +   P+  T+++LI    + G+ +        + + G
Sbjct: 63  RARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTG 122

Query: 199 -ILPNKFTYTIVISGLCQINRADEAYRLFLK-MKDSGCSPDFVAYNALLNGFCKLRRVDE 256
             L N   +  ++ GLC   R DEA  + L+ M + GC+ + ++YN LL G C  +R +E
Sbjct: 123 WSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEE 182

Query: 257 ALALLRSFEKDG---FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           AL L+     DG     P + +Y+ +IDGL +A+  D A   ++ M ++ + P+   Y  
Sbjct: 183 ALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G    GK K+ +++L +M   G+ PD   Y  L+   C  G   +AR++   + ++ 
Sbjct: 243 LIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKG 302

Query: 374 SLPNTHTFTILICG----------------MCRNG-------------------MVDDAQ 398
             P+   + IL+ G                M RNG                   M+D+A 
Sbjct: 303 IKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAM 362

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------------------- 439
            +F+KM +    P V  + ALID LCK G ++ A L F +M                   
Sbjct: 363 HIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGL 422

Query: 440 ----EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
               +  K   LF  +   G R+ + A    ++   C  G + +A +++  +      PD
Sbjct: 423 CTVDKWEKAEKLFFEVLDQGIRL-NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPD 481

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +I+YN+L++G C  G I+ A KL   +   GL+PD  TY TL++G  +  R +DA+ +F 
Sbjct: 482 VISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFR 541

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG- 614
           +M   G TP    Y +++    +  +F  A  L+L  + +    D  +   I   L +  
Sbjct: 542 EMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNN 601

Query: 615 ---EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
              E     Q L   D +L+ F +    I +  L + G+ ++A+++F+  +    +V   
Sbjct: 602 FVDEAFKMFQSLCSKDLQLDIFTI---NIMIGALLKGGRKEDAMDLFAT-ISAYGLVPDV 657

Query: 672 SCVKLI-HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
              +LI   L K G L+   ++F    +NG     R+ N L+R LL   D  +   Y  L
Sbjct: 658 ETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVY--L 715

Query: 731 CRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
            ++    + L+A     T S+L   ++  E + ++
Sbjct: 716 SKLDEKNFSLEA----STTSMLISIYSRAEYQQLA 746



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/513 (24%), Positives = 221/513 (43%), Gaps = 13/513 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K    D        +    V   +  +  LI GY   G  ++ ++   +M  
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMST 265

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPD  IY  +L+   +      A  ++  +++    P++  + +L++G +  G    
Sbjct: 266 HGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSE 325

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
               LD M + G+ P+   + I+ +   +    DEA  +F KM+    SP  V Y AL++
Sbjct: 326 MHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALID 385

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CKL RVD+A+        +G  P +  +S L+ GL    ++++A   + ++ ++ I  
Sbjct: 386 ALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRL 445

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   + +++  L   G+V +A +L+  M    + PD   YN L+ G C  G +D+A  L 
Sbjct: 446 NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLL 505

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +      P+  T+  L+ G C+   +DDA  LF +M   G  P V  +N ++ GL + 
Sbjct: 506 DVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQI 565

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G   +A  L+  M                 R  D  +   ++   C    + +A+K+   
Sbjct: 566 GRFCEAKELYLNM-------------INNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L       DI T N +I    K G    A+ LF  +   GL PD  TY  +   L +   
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+   +F  M +NG  P+  +  +L+ W   R
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHR 705



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 124/274 (45%), Gaps = 2/274 (0%)

Query: 94  VSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           V V  DV  +  L+ G+   G  ++A +    M     +PD + YN +L+   + +    
Sbjct: 476 VDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDD 535

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +++ EM+     P +VT++ +++GL + G+   A ++   M       + +TYTI+++
Sbjct: 536 AYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILN 595

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+ N  DEA+++F  +       D    N ++    K  R ++A+ L  +    G VP
Sbjct: 596 GLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVP 655

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y  + + L +    +E    +  M E    P+  +   ++R L   G +  A   L
Sbjct: 656 DVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYL 715

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           S + E+    +    + LI  +        A+SL
Sbjct: 716 SKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSL 749


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 286/611 (46%), Gaps = 19/611 (3%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           + +L+I    ++   +  +Y  M K   LP++ + +L +  L  + + E  +++  E+ +
Sbjct: 116 DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVE 175

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G+ P++F Y   I    ++     A  L   MK  G SP    YN ++ G CK +R+ +
Sbjct: 176 SGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L          P   +Y+ LIDG  +  + +EA+    +M  E +EP ++ +  ++ 
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLN 295

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL  A  +++A ++L +M   G VPD + Y  L  G    G +D + +L  E  ++    
Sbjct: 296 GLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
             +T +IL+  +C+ G ++ A+++  K  + G  P    FN +++G C+ G++ KA    
Sbjct: 356 LDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTI 415

Query: 437 YKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            KME +G  P              +  +  ++V+++C    + +A K + ++ E G LP+
Sbjct: 416 EKMEAVGLRP--------------NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN 461

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + TYN+LI+G+ +    +   ++ +E++ KGL+P+ ++YG LIN L +     +A  I G
Sbjct: 462 VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG 521

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKG 614
            M   G  P+  +Y  L+  SC   K   AF  + + + R+I          I    +KG
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +V  A     E+  K   F +  Y   + G    G V++AL ++  + +     T  +  
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH 641

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           +LI G  K G L L   ++   L+   +    + N L+   +   D +K  + H    M+
Sbjct: 642 RLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLH--SAME 698

Query: 735 SVGYDLDACLY 745
           + G   D   Y
Sbjct: 699 AQGIQPDKMTY 709



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 168/717 (23%), Positives = 322/717 (44%), Gaps = 35/717 (4%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYW 83
           P+ P  S   + S+  ++K        ++   K   L S AS +  +  L+    ++   
Sbjct: 109 PMKPLFSDMLL-SICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTL 167

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q   E+    +     ++   I    K+GD ++A+E    MK     P V++YN V+   
Sbjct: 168 QLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGL 227

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +++    A  ++ EM+     PN +T++ LI+G  K G+ E A  + + M    + P  
Sbjct: 228 CKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTI 287

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +++GLC+    +EA R+  +M+  G  PD   Y  L +G  K   VD ++ L   
Sbjct: 288 ITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEE 347

Query: 264 FEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
             + G   ++  Y+C  L++ L +    ++A    +K  E  + P  V +  ++ G  + 
Sbjct: 348 AVRKGV--QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQV 405

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G +  A   +  M   G+ P+   YN+L+K FC++  +++A     ++ ++  LPN  T+
Sbjct: 406 GDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETY 465

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
             LI G  R+ + D   ++  +MEK G  P+V  +  LI+ LCK   + +A ++      
Sbjct: 466 NTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL----- 520

Query: 442 GKNPTLFLRLSQGGNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
                        G+ VH     +      +++  C AG +  A++   ++     +P +
Sbjct: 521 -------------GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTL 567

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           +TYN LING CK G +  A  L  E+  KGL  D +TY +LI+G       + A  ++  
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKG 614
           M ++G  P+   Y  L+   C +    L   ++ + L+ ++   D  + +  I  +++ G
Sbjct: 628 MKKSGIKPTLNTYHRLIA-GCGKEGLVLVEKIYQEMLQ-MNLVPDRVIYNALIHCYVEHG 685

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
           +V+ A      M+ +        Y   ++G  ++G++ +  N+ + +     I    +  
Sbjct: 686 DVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYD 745

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
            LI G CK    D A   +    +NGF     +C+ L+  L   ++  + H   ++C
Sbjct: 746 ILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGL---REEGRSHDADVIC 799



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 254/586 (43%), Gaps = 91/586 (15%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K        +  DE+    V+     +  LI GY KVG  E+A     +MK 
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF--------------- 171
            + +P +  +N++LN   R Q+   A  V  EM     +P+  T+               
Sbjct: 281 ENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA 340

Query: 172 --------------------SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
                               S+L+N L K G  E A ++L +  + G+ P    +  +++
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G CQ+   ++AY    KM+  G  P+ V YN+L+  FC+++ ++EA   ++   + G +P
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LIDG  R+  +D  +    +M ++ ++P+V+ YG +I  L +   + +A  +L
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL 520

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM  RG+VP+   YN LI G C  G L  A     E+  R+ +P   T+ ILI G+C+ 
Sbjct: 521 GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKK 580

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTL--F 448
           G V +A+ L +++ + G    V  +N+LI G   AG ++KA  L+  M+  G  PTL  +
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 449 LRLSQGG------------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            RL  G                   N V D+     ++  Y   G + KA  +   +   
Sbjct: 641 HRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQ 700

Query: 491 GNLPDIITYNSLI-----------------------------------NGFCKVGNINGA 515
           G  PD +TYN LI                                    G CK+ + +GA
Sbjct: 701 GIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGA 760

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
              ++E+   G  P       LI GL+   R  DA  I  +M   G
Sbjct: 761 YVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 217/438 (49%), Gaps = 26/438 (5%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E  +K L+ M  +G +P+    T +I G C+  +  +A R+   +++SG  PD
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            + YN L+ G+CK   +D+AL +L   E+    P + +Y+ ++  L  + +  EA     
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVL---ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + +  PDV+ Y ++I        V  AMKLL +MR++G  PD   YN LI G C  G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A      +      PN  T  I++  MC  G   DA++L   M + GC PSV  FN
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 418 ALIDGLCKAGELEKANLLFYKM--------EIGKNPTL--------------FLRLSQGG 455
            LI+ LC+   L +A  +  KM         +  NP L              +L +    
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  T++   C  G    A +IL QL+  G  P +ITYN++I+G  KVG    A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +L +E++ KGL+PD +TY TL+ GL    + ++A +IF  M      PS   Y ++M  
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533

Query: 576 SCRRRKFSLAFSLWLQYL 593
            C+ ++ S A   +L Y+
Sbjct: 534 LCKAQQTSRAID-FLAYM 550



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 209/439 (47%), Gaps = 18/439 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ + G   KA      ++     PDV  YN ++    +      AL V   + +++
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMS 204

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ ++  L  SGK + A+++LD   QR   P+  TYTI+I   C  +   +A 
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M+  GC PD V YN L+NG CK  R+DEA+  L +    G  P + +++ ++  +
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R+ +A      M  +   P VV + ++I  L     +  A+ +L  M + G +P++
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+ GFC    +D+A      +  R   P+  T+  L+  +C++G  D A ++ N+
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKA 462
           +   GC P +  +N +IDGL K G+ E A  L  +M   G  P              D  
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKP--------------DII 490

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++      G + +A KI   +      P  +TYN+++ G CK    + A+     +
Sbjct: 491 TYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550

Query: 523 QLKGLRPDSVTYGTLINGL 541
             KG +P   TY  LI G+
Sbjct: 551 VEKGCKPTKATYTILIEGI 569



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 190/389 (48%), Gaps = 35/389 (8%)

Query: 93  NVSVVSDV--FFVLISGYYKVGDCEKALESF----------------------GKMKEF- 127
           N   V DV  + VLI GY K G+ +KAL+                        GK+KE  
Sbjct: 170 NSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAM 229

Query: 128 ---------DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
                    +C PDV  Y  ++           A+ +  EM K  C P++VT+++LING+
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K G+ + AIK L+ M   G  PN  T+ I++  +C   R  +A RL   M   GCSP  
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V +N L+N  C+ R +  A+ +L    K G +P   SY+ L+ G  + K+ D A  +   
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M      PD+V Y  ++  L + GK   A+++L+ +  +G  P    YN +I G   +G 
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
            + A  L  E+ ++   P+  T++ L+ G+   G VD+A K+F+ ME     PS   +NA
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529

Query: 419 LIDGLCKAGELEKA-NLLFYKMEIGKNPT 446
           ++ GLCKA +  +A + L Y +E G  PT
Sbjct: 530 IMLGLCKAQQTSRAIDFLAYMVEKGCKPT 558



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 230/480 (47%), Gaps = 19/480 (3%)

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           +F   I +  L +    +E  +   +M   G  PD +A  +L+ GFC+  +  +A  ++ 
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             E  G VP + +Y+ LI G  ++   D+A     +M    + PDVV Y  ++R L ++G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG 223

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K+K+AM++L    +R   PD   Y  LI+  C+   + QA  L  E+ K+   P+  T+ 
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEI 441
           +LI G+C+ G +D+A K  N M   GC P+V   N ++  +C  G  ++   LL   +  
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G +P++               +   ++   C   L+ +A  +L ++ + G +P+ ++YN 
Sbjct: 344 GCSPSVV--------------TFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L++GFC+   ++ A++  + +  +G  PD VTY TL+  L +  + + A  I  Q+   G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ-KGEVENAI 620
           C+P    Y +++    +  K   A  L  +  R     D  +  ++   L  +G+V+ AI
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           +   +M+          Y   ++GLC+  Q   A++  + +VE     T  +   LI G+
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 157/312 (50%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           +G     + LDE+R          + VLI+G  K G  ++A++    M  + CQP+V  +
Sbjct: 258 SGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +L        ++ A  +  +M++  C P++VTF++LIN L +      AI +L++M +
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G +PN  +Y  ++ G CQ  + D A      M   GC PD V YN LL   CK  + D 
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+ +L      G  P L +Y+ +IDGL +  + + A     +M  + ++PD++ Y  ++R
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL   GKV +A+K+  DM    I P    YNA++ G C      +A      + ++   P
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 557

Query: 377 NTHTFTILICGM 388
              T+TILI G+
Sbjct: 558 TKATYTILIEGI 569



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 198/409 (48%), Gaps = 27/409 (6%)

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           + +R L   G++++ +K L  M  +G +PD     +LI+GFC  G   +A  +   +   
Sbjct: 112 IHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
            ++P+  T+ +LI G C++G +D A ++  +M  A   P V  +N ++  LC +G+L++A
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEA 228

Query: 433 -NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +L  +M+    P              D  +   ++E  C    + +A K+L ++ + G
Sbjct: 229 MEVLDRQMQRECYP--------------DVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD++TYN LING CK G ++ A+K    + L G +P+ +T+  ++  +    R  DA 
Sbjct: 275 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAE 334

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           R+   M + GC+PS   +  L+ + CR+R    A  +  +  +     +  S    +  F
Sbjct: 335 RLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGF 394

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIV 668
            Q+ +++ AI+ L  M  +     +  Y   L  LC+DG+   A+ I + L    C  ++
Sbjct: 395 CQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVL 454

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSL 715
              + V  I GL K G  + A ++     + G  L+P +  Y  LLR L
Sbjct: 455 ITYNTV--IDGLTKVGKTEYAAELLEEMRRKG--LKPDIITYSTLLRGL 499



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 123/235 (52%), Gaps = 3/235 (1%)

Query: 87  DELRSG-NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           D LR G + SVV+  F +LI+   +     +A++   KM +  C P+   YN +L+   +
Sbjct: 339 DMLRKGCSPSVVT--FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQ 396

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+     MV   C P+IVT++ L+  L K GK + A+++L++++ +G  P   T
Sbjct: 397 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLIT 456

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  VI GL ++ + + A  L  +M+  G  PD + Y+ LL G     +VDEA+ +    E
Sbjct: 457 YNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDME 516

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                P   +Y+ ++ GL +A++   A  +   M E+  +P    Y ++I G+++
Sbjct: 517 GLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 27/334 (8%)

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N  +  L + GELE+      +M           + QG   + D  +  +++  +C +G 
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERM-----------IYQGD--IPDVIACTSLIRGFCRSGK 157

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             KA +I+  L  SG +PD+ITYN LI G+CK G I+ AL++ + + +    PD VTY T
Sbjct: 158 TRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNT 214

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           ++  L    + ++A  +  +  Q  C P    Y  L+  +C       A  L L  +R  
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKL-LDEMRKK 273

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
             + D    +  I    ++G ++ AI+ L  M        +  + I L  +C  G+  +A
Sbjct: 274 GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDA 333

Query: 655 LNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             + + ++        PS V    LI+ LC++  L  A+DV     K+G +      N L
Sbjct: 334 ERLLADMLRKGC---SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L    F ++ K   A   L  M S G   D   Y
Sbjct: 391 LHG--FCQEKKMDRAIEYLEIMVSRGCYPDIVTY 422



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 77/147 (52%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +++ L K    D   + L++L S   S V   +  +I G  KVG  E A E   +M+ 
Sbjct: 423 NTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRR 482

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+  Y+ +L     +     A+ ++++M  L+  P+ VT++ ++ GL K+ +T  
Sbjct: 483 KGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 542

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGL 213
           AI  L  M ++G  P K TYTI+I G+
Sbjct: 543 AIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 49/267 (18%)

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G+R  ++ +    + +    G + +  K L ++   G++PD+I   SLI GFC+ G    
Sbjct: 101 GSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRK 160

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A ++ + L+  G  PD +TY  LI G  +    + A ++  +M      P    Y +++ 
Sbjct: 161 ATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILR 217

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C                   SG+  E+M+ ++  +Q+    + I              
Sbjct: 218 SLCD------------------SGKLKEAMEVLDRQMQRECYPDVIT------------- 246

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAM-- 690
              YTI +   C D  V +A+ +   + +  CK  V   +   LI+G+CK G LD A+  
Sbjct: 247 ---YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV--LINGICKEGRLDEAIKF 301

Query: 691 --DVFLYTLKNGFILRPRVCNYLLRSL 715
             ++ LY  +   I      N +LRS+
Sbjct: 302 LNNMPLYGCQPNVITH----NIILRSM 324



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 51/113 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI  L K    +   + L+E+R   +      +  L+ G    G  ++A++ F  M+ 
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
              +P    YNA++    + Q    A+     MV+  C P   T+++LI G++
Sbjct: 518 LSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 235/451 (52%), Gaps = 17/451 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  +  +L    +   + + ++++ +M       N+VT S+LIN  S+ G   ++  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
              + ++G  P+  T T +I GLC      +A     K+   G   + V+Y  L+NG CK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 251 LRRVDEALALLRSFEKDGFVPRLGS--YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           + +   AL +LR    DG + RL    Y+ +IDG+ + K  ++A+ +Y +M  ++I P V
Sbjct: 187 VGQTKAALEMLRRI--DGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTV 244

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  +I GL   G++KDA+ LL  M    I P  Y ++ L+  FC  G + +A+++ V 
Sbjct: 245 VTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVV 304

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + K+D  PN  T+  L+ G C    V+ A+ +FN M + G  P V  ++ +I G CK   
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           +++A  LF +M   +   +F           D  +  ++++  C +G I  A K++ ++ 
Sbjct: 365 VDEAMKLFEEMHCKQ---IF----------PDVVTYNSLIDGLCKSGRISYALKLIGEMH 411

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P+IITYNSL++  CK  +++ A++L  +L+   ++P   TY  LINGL +  R +
Sbjct: 412 DRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLK 471

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           DA ++F  +  NG       Y +++   C++
Sbjct: 472 DAQKVFEDVLVNGYNIDVYTYNTMIKGFCKK 502



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 179/324 (55%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  KVG  + ALE   ++     + DV +YN +++   + +L   A   Y EMV   
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P +VT++ LI GL   G+ + AI +L +M    I P  +T++I++   C+  +  EA 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +F+ M      P+ V YN+L+NG+C +  V++A ++  +  + G  P + SYS +I G 
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K  DEA   + +M  ++I PDVV Y  +I GL ++G++  A+KL+ +M +RG  P+ 
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN+L+   C    +D+A  L  ++   +  P+  T+ ILI G+C++G + DAQK+F  
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479

Query: 404 MEKAGCFPSVGMFNALIDGLCKAG 427
           +   G    V  +N +I G CK G
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 228/498 (45%), Gaps = 57/498 (11%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           + Q+   P+   +  ++  L + N       L  +M+ +G + + V  + L+N F +L  
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
              + ++  +  K G+ P   + + LI GL       +A  ++ K+     + + V Y  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL + G+ K A+++L  +  + +  D   YN +I G C   L++ A     E+  + 
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA- 432
             P   T+  LICG+C  G + DA  L +KM      P+V  F+ L+D  CK G++++A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           N+    M+    P +               +  +++  YC    ++KA  I   +A+ G 
Sbjct: 300 NVFVVMMKKDVKPNI--------------VTYNSLMNGYCLVNEVNKAESIFNTMAQIGV 345

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD+ +Y+ +I+GFCK+  ++ A+KLF+E+  K + PD VTY +LI+GL +  R   A +
Sbjct: 346 APDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALK 405

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           + G+M   G  P+   Y SL+   C+                                  
Sbjct: 406 LIGEMHDRGQPPNIITYNSLLDALCKNH-------------------------------- 433

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
              V+ AI    E+  KL D  + P    Y I + GLC+ G++K+A  +F  ++     +
Sbjct: 434 --HVDKAI----ELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNI 487

Query: 669 TPPSCVKLIHGLCKRGYL 686
              +   +I G CK+G++
Sbjct: 488 DVYTYNTMIKGFCKKGFV 505



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/473 (23%), Positives = 216/473 (45%), Gaps = 48/473 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L+K N + +      ++    ++       +LI+ + ++G    +   F  + +  
Sbjct: 75  ILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKG 134

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +PD      ++     K     AL  + +++ L    N V++  LINGL K G+T+ A+
Sbjct: 135 YEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAAL 194

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +ML  +  + +  +   Y  +I G+C+    ++A+  + +M      P  V YN L+ G 
Sbjct: 195 EMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGL 254

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C + ++ +A+ LL     +   P + ++S L+D   +  +  EA   +  M ++ ++P++
Sbjct: 255 CIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNI 314

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++ G     +V  A  + + M + G+ PD + Y+ +I GFC + ++D+A  L  E
Sbjct: 315 VTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEE 374

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   P+  T+  LI G+C++G +  A KL  +M   G  P++  +N+L+D LCK   
Sbjct: 375 MHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHH 434

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++KA                                                 ++L +L 
Sbjct: 435 VDKA------------------------------------------------IELLTKLK 446

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +    P + TYN LING CK G +  A K+F+++ + G   D  TY T+I G 
Sbjct: 447 DHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGF 499



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/502 (23%), Positives = 219/502 (43%), Gaps = 55/502 (10%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           Q++    ++   L  K+   +P  + +  +L    K       ++L R  E +G    L 
Sbjct: 48  QLHNLVSSFNHLLHQKNP--TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLV 105

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + S LI+   +      +++ +  + ++  EPD +    +I+GL   G +  A+     +
Sbjct: 106 TLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKV 165

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G   +   Y  LI G C +G    A  +   I  +    +   +  +I G+C++ +V
Sbjct: 166 LALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLV 225

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQ 453
           +DA   +++M      P+V  +N LI GLC  G+L+ A  L +KM +   NPT++     
Sbjct: 226 NDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVY----- 280

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   +V+ +C  G + +A  + + + +    P+I+TYNSL+NG+C V  +N
Sbjct: 281 ---------TFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  +F  +   G+ PD  +Y  +I+G  ++   ++A ++F +M      P    Y SL+
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLI 391

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
              C+                  SGR   ++K I E   +G+  N I             
Sbjct: 392 DGLCK------------------SGRISYALKLIGEMHDRGQPPNIIT------------ 421

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMD 691
               Y   L  LC++  V +A+ + + L +    + P  C    LI+GLCK G L  A  
Sbjct: 422 ----YNSLLDALCKNHHVDKAIELLTKLKDHN--IQPSVCTYNILINGLCKSGRLKDAQK 475

Query: 692 VFLYTLKNGFILRPRVCNYLLR 713
           VF   L NG+ +     N +++
Sbjct: 476 VFEDVLVNGYNIDVYTYNTMIK 497



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 148/286 (51%), Gaps = 4/286 (1%)

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
           L  + FD Y     E+ +  +      +  LI G   +G  + A+    KM   +  P V
Sbjct: 224 LVNDAFDFY----SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTV 279

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
           Y ++ +++   ++     A  V+  M+K +  PNIVT++ L+NG     +   A  + + 
Sbjct: 280 YTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNT 339

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M Q G+ P+  +Y+I+ISG C+I   DEA +LF +M      PD V YN+L++G CK  R
Sbjct: 340 MAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +  AL L+      G  P + +Y+ L+D L +    D+A     K+ +  I+P V  Y +
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
           +I GL ++G++KDA K+  D+   G   D Y YN +IKGFC  G +
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +IS   K    D   +  +E+    +      +  LI G  K G    AL+  G+M
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    P++  YN++L+   +      A+ +  ++   N  P++ T+++LINGL KSG+ 
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           + A K+ +++   G   + +TY  +I G C+
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 225/447 (50%), Gaps = 16/447 (3%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           SG     S +  +L+  Y +       LE+F +  ++  +  V   N +L+   ++  F 
Sbjct: 153 SGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFG 212

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
               VY EM++    PN++TF+ +INGL K GK   A  ++D+M   G  PN  TY  +I
Sbjct: 213 GVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLI 272

Query: 211 SGLCQINRADEAYR---LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            G C++ R  + Y+   +  +M ++  SP+ V +N L++GFCK   +  AL +    +  
Sbjct: 273 DGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQ 332

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ L++GL    + +EA     +M    ++P+V+ Y  +I G  +   +++A
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +L  ++ ++G+ P+   +N L+ G+C  G +++A  LQ  + ++  LPN  T+  LI G
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVG 452

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            CR G +++ + L N+M+  G       +N LI   C+  E +KA  L  +M        
Sbjct: 453 FCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM-------- 504

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              L +G    H   +   ++  YC  G +  A  +  Q+ + G   +++TYN LI G+C
Sbjct: 505 ---LDKGLKPSH--LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYC 559

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTY 534
           + G +  A  L  E+  KGL P+  TY
Sbjct: 560 RKGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 212/417 (50%), Gaps = 23/417 (5%)

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           Y++  L+C P       L++ L K  +      +  EM +R I PN  T+  VI+GLC++
Sbjct: 191 YKLSVLSCNP-------LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKV 243

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE---ALALLRSFEKDGFVPRL 273
            + ++A  +   MK  G  P+ V YN L++G+CK+ RV +   A A+L+   ++   P  
Sbjct: 244 GKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNS 303

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++ LIDG  + +    A   + +M  + ++P VV Y  ++ GL   GK+ +A  LL +
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE 363

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M    + P+   YNALI G+C   LL++AR L   I K+   PN  TF  L+ G C+ G 
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           +++A  L   M + G  P+   +N LI G C+ G++E+   L  +M             Q
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEM-------------Q 470

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +   ++  +C      KA +++ ++ + G  P  +TYN L+NG+C  GN+ 
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 530

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            AL L K+++ +G   + VTY  LI G  R  + EDA  +  +M + G  P+   Y+
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 201/397 (50%), Gaps = 3/397 (0%)

Query: 46  VGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLI 105
           +G   F  A   +   S  S + ++S L+K N F        E+    +S     F  +I
Sbjct: 178 LGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVI 237

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN---IAFRKQLFLLALAVYYEMVKL 162
           +G  KVG   KA +    MK +   P+V  YN +++      R      A A+  EMV+ 
Sbjct: 238 NGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVEN 297

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN VTF++LI+G  K      A+K+ +EM  +G+ P   TY  +++GLC   + +EA
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEA 357

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M  S   P+ + YNAL+NG+CK + ++EA  L  +  K G  P + +++ L+ G
Sbjct: 358 KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +  + +EA+   + M E+   P+   Y  +I G    GK+++   LL++M+ RG+  D
Sbjct: 418 YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN LI  +C+     +A  L  E+  +   P+  T+ IL+ G C  G +  A  L  
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRK 537

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           +MEK G + +V  +N LI G C+ G+LE AN L  +M
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 199/406 (49%), Gaps = 5/406 (1%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQ 84
           L  LS   + S ++K +N   G  F      R+++  +  + + VI+ L K    +    
Sbjct: 193 LSVLSCNPLLSALVK-ENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYK---VGDCEKALESFGKMKEFDCQPDVYIYNAVLN 141
            +D+++          +  LI GY K   VG   KA     +M E    P+   +N +++
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
              + +    AL V+ EM      P +VT++ L+NGL   GK   A  +LDEM    + P
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N  TY  +I+G C+    +EA  LF  +   G +P+ + +N LL+G+CK  +++EA  L 
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQ 431

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           +   + GF+P   +Y+CLI G  R  + +E      +M    ++ D V Y ++I    E 
Sbjct: 432 KVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEK 491

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            + K A +L+ +M ++G+ P    YN L+ G+C  G L  A +L+ ++ K     N  T+
Sbjct: 492 KEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTY 551

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            +LI G CR G ++DA  L N+M + G  P+   +  + + + + G
Sbjct: 552 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 221/479 (46%), Gaps = 56/479 (11%)

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALL--RSFEKDG-FVPRLGSYSC--LIDGLFRA 286
           S CS  F A N+++     L  V+ +  +L   +F++ G +  +L   SC  L+  L + 
Sbjct: 150 SVCSGQFCA-NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKE 208

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
             +      Y++M   KI P+++ +  +I GL + GK+  A  ++ DM+  G  P+   Y
Sbjct: 209 NEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTY 268

Query: 347 NALIKGFCDLGLLDQ---ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           N LI G+C +G + +   A ++  E+ +    PN+ TF +LI G C++  +  A K+F +
Sbjct: 269 NTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M+  G  P+V  +N+L++GLC  G+L +A +L  +M                N   +  +
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM-------------LSSNLKPNVIT 375

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  YC   L+ +A ++   + + G  P++IT+N+L++G+CK G +  A  L K + 
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            KG  P++ TY  LI G  R  + E+   +  +M   G       Y  L++  C +++  
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A  L                  I+E L KG               L    L  Y I L 
Sbjct: 496 KAARL------------------IDEMLDKG---------------LKPSHLT-YNILLN 521

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           G C +G ++ ALN+   + +        +   LI G C++G L+ A  +    L+ G I
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 43/288 (14%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK---LF 519
           +  T++   C  G ++KA  ++  +   G  P+++TYN+LI+G+CK+G +    K   + 
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           KE+    + P+SVT+  LI+G  + +    A ++F +M   G  P+   Y SL+   C  
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                             G+ +E+   ++E L      N I                 Y 
Sbjct: 352 ------------------GKLNEAKVLLDEMLSSNLKPNVIT----------------YN 377

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTL 697
             + G C+   ++EA  +F  +   K  +TP       L+HG CK G ++ A  +    L
Sbjct: 378 ALINGYCKKKLLEEARELFDNI--GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + GF+  P    Y    + F ++ K     +LL  M+  G   D   Y
Sbjct: 436 EKGFL--PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTY 481


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 225/441 (51%), Gaps = 49/441 (11%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            G+MK     P +  + +++           AL ++++M+ +   P+   ++++I  L K
Sbjct: 2   LGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 61

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
             K ++A    ++M Q G LP+K TYT+++  L +  + ++ +++F +M   G SP+ V 
Sbjct: 62  INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 121

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y  ++NG+CK  R+D+AL+L+R  +  G  P    YS LIDGL +  R++EA    R++F
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEA----RELF 177

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E                   AG V+D +                 Y + I G C  G LD
Sbjct: 178 E-----------------MAAGDVQDVI----------------VYTSFISGLCKAGKLD 204

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A+++ V++ +    P+  ++ ++I  +C++  V +A++L ++  +  C P V +   L+
Sbjct: 205 EAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLV 264

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           DGLCK+  +E+A ++              R+ + G+R     +   +++  C A  +  A
Sbjct: 265 DGLCKSRRVEEACVILE------------RMLEAGDRAPSVVTYSAVIDGLCKADRLDDA 312

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           Y +L ++  +G +PD++TY ++I+ FCKVG ++ A +LF+ +  +G   D V Y  LI G
Sbjct: 313 YIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRG 372

Query: 541 LQRVDREEDAFRIFGQMPQNG 561
             R  + ++A  +  +M   G
Sbjct: 373 YCRAAKVDEAIAMIEEMAGRG 393



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 210/443 (47%), Gaps = 51/443 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E+++  ++     F  LI    ++    KAL+ F +M +   +PD ++Y  V+    +
Sbjct: 2   LGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCK 61

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                LA + + +MV+  CLP+ VT+++L++ L K+ K E   ++ +EM  +G  P   T
Sbjct: 62  INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVT 121

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  V++G C+  R D+A  L  ++K +G SP    Y+ L++G CK  R +EA  L     
Sbjct: 122 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMAA 181

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            D  V  +  Y+  I GL +A + DEA A + KM E    PD V Y V+I  L +  +V 
Sbjct: 182 GD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 239

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA-RSLQVEIWKRDSLPNTHTFTIL 384
           +A +L+    ER  +P       L+ G C    +++A   L+  +   D  P+  T++ +
Sbjct: 240 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAV 299

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           I G+C+   +DDA  +  KM +AGC P V  + A+ID  CK G L++A  LF +M     
Sbjct: 300 IDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH---- 355

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                                                       E G   D++ YN LI 
Sbjct: 356 --------------------------------------------ERGCASDVVAYNILIR 371

Query: 505 GFCKVGNINGALKLFKELQLKGL 527
           G+C+   ++ A+ + +E+  +G+
Sbjct: 372 GYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 165/342 (48%), Gaps = 3/342 (0%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T V   + K     +   +F    +   L    + + ++  L K   ++   Q  +E+ S
Sbjct: 53  TVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 112

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
              S     +  +++GY K G  ++AL    ++K     P   +Y+ +++   +      
Sbjct: 113 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEE 172

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + +EM   + + +++ ++  I+GL K+GK + A  +  +M + G  P+  +Y ++I 
Sbjct: 173 AREL-FEMAAGD-VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 230

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFV 270
            LC+ NR  EA  L  +  +  C P       L++G CK RRV+EA  +L R  E     
Sbjct: 231 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRA 290

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +YS +IDGL +A R D+AY   +KM      PDVV Y  +I    + G++ +A +L
Sbjct: 291 PSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 350

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
              M ERG   D   YN LI+G+C    +D+A ++  E+  R
Sbjct: 351 FQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 392



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 177/416 (42%), Gaps = 48/416 (11%)

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M    I P +V +G +IR L E      A+++   M +  + PD + Y  +I   C + 
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD A S   ++ +   LP+  T+T+L+  + +    +   ++F +M   G  P +  + 
Sbjct: 64  KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            +++G CKAG +++A  L  ++             +G  R    +   T+++  C     
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRL-------------KGTGRSPSGSLYSTLIDGLCKHDR- 169

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           H+  + L ++A +G++ D+I Y S I+G CK G ++ A  +  ++   G  PD V+Y  +
Sbjct: 170 HEEARELFEMA-AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 228

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I  L + +R  +A  +  Q  +  C P   V   L+   C+ R                 
Sbjct: 229 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSR----------------- 271

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            R +E+   +E  L+ G+   ++                 Y+  + GLC+  ++ +A  +
Sbjct: 272 -RVEEACVILERMLEAGDRAPSV---------------VTYSAVIDGLCKADRLDDAYIV 315

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
              +     +    +   +I   CK G LD A ++F    + G        N L+R
Sbjct: 316 LQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIR 371



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 50/370 (13%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P   TF  LI  +C     + A ++F++M      P   ++  +I  LCK  +L+ A   
Sbjct: 12  PTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASY 71

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F +M             Q G  + DK +   +V     A    + ++I  ++   G+ P+
Sbjct: 72  FEQM------------VQSGC-LPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 118

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TY +++NG+CK G I+ AL L + L+  G  P    Y TLI+GL + DR E+A  +F 
Sbjct: 119 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE 178

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
                G      VY S ++  C+                  +G+ DE+     + ++ G 
Sbjct: 179 MAA--GDVQDVIVYTSFISGLCK------------------AGKLDEAKAVHVKMIEAGC 218

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
             + +                 Y + +  LC+D +V EA  +    +E K +   P C  
Sbjct: 219 APDPVS----------------YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV 262

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           L+ GLCK   ++ A  +    L+ G    P V  Y        K ++   AY +L +M+ 
Sbjct: 263 LVDGLCKSRRVEEACVILERMLEAGD-RAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRR 321

Query: 736 VGYDLDACLY 745
            G   D   Y
Sbjct: 322 AGCVPDVVTY 331


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 253/547 (46%), Gaps = 56/547 (10%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L E++          +  ++    K G  E+AL    +M++   + DV +   ++   
Sbjct: 248 RMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGY 307

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +Q    AL ++ E +K   +P  V + +LI G  + G T+ A ++  +MT +G+LP+ 
Sbjct: 308 CLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPST 367

Query: 204 FTYTIVISGL----------------------------------CQINRADEAYRLFLKM 229
           F  ++V+ GL                                  CQ ++  EA  LF +M
Sbjct: 368 FELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRM 427

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           K +G  P    YN+LL G+CK   +DEA+ L      +GF P + +Y  L+ G    K +
Sbjct: 428 KKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDF 487

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D AYA   +M +  +  +   Y V+I G+    +V +   +L      G +P    YN++
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSI 547

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I GF   G++  A ++  ++ ++   PN  T+T  I G CR G  D A K+ N + + G 
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607

Query: 410 FPSVGMFNALIDGLCKAGELEKA--------------NLLFYKMEIG--KNPTLFLRLSQ 453
            P +  +NALI+G C+ G +  A              N + Y   I   KN  +   +S+
Sbjct: 608 QPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSK 667

Query: 454 ------GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                  G  V D ++  T+++ +   G +  A ++  ++   G +PD  T+ +L +G C
Sbjct: 668 FYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLC 727

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G+I+GA KL +E++   +RP+   Y  LING  R  + ++AFR+  +M   G  P   
Sbjct: 728 RSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDT 787

Query: 568 VYKSLMT 574
            Y  L++
Sbjct: 788 TYDILVS 794



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 169/644 (26%), Positives = 299/644 (46%), Gaps = 41/644 (6%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL  F +M+    + D ++++A+++   ++ +   A+ ++ EM      P+   ++L 
Sbjct: 174 KDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALA 233

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  L K G    A++ML EM + G     FTY  ++  L +  R +EA R+  +M+D+G 
Sbjct: 234 ITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK 293

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D +    L+ G+C  + V  AL L +   KDG VP    Y  LI G  +     +AY 
Sbjct: 294 KMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYE 353

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             R+M  + + P      ++++GL    + KDA+ L  +M + G+ PD + YN LI   C
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHC 412

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               L +A +L   + K    P+ +T+  L+ G C+ G +D+A KL+++M   G  P+V 
Sbjct: 413 QAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVV 472

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L+ G     + + A  L  +M+            Q G   +D  +   ++   C  
Sbjct: 473 TYITLMRGYIAKKDFDNAYALLDEMK------------QNGVSCNDY-TYNVLINGICMV 519

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +   +L      G +P ++TYNS+INGF K G +  A  ++++++ KGL P+ +TY
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            + I+G  R    + A ++   + + G  P    Y +L+   C+    S A  L +  L+
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 595 D------------ISG-RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
           D            I+G ++   MK + +F      E+ I+G +  D        + YT  
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFY-----ESMIKGGIVAD-------TSTYTTL 687

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G  +DG V  AL ++S ++    I    +   L HGLC+ G +D A  +     +   
Sbjct: 688 IDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRR--L 745

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +RP V  Y +    + +D K   A+ L   M ++G   D   Y
Sbjct: 746 DVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 103/206 (50%), Gaps = 2/206 (0%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D+  + L+++R   +      +  LI+G+ + G+   AL+    + +    P+  +YN++
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 140 LNIAFRKQLFLLALAVYYE-MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +   ++    +  ++ +YE M+K   + +  T++ LI+G SK G    A+++  EM  +G
Sbjct: 653 IT-GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
            +P+ FT+T +  GLC+    D A +L  +M+     P+   YN L+NG+ +  ++ EA 
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAF 771

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLF 284
            L       G  P   +Y  L+   F
Sbjct: 772 RLHDEMLNMGIQPDDTTYDILVSKKF 797


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 245/528 (46%), Gaps = 15/528 (2%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S ++ S +  +LL+   +   W+ L  +        +  F ++I  + + G    A    
Sbjct: 242 SSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLL 301

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M +F C+PDVY YN ++N    +     AL   + M+K  C P+++TFS +I      
Sbjct: 302 FVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNE 361

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A K+ + + + G+ PN   Y  ++SG  +     +A  L+ +M+D G +PD   +
Sbjct: 362 GNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATF 421

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G  K  +  ++  L R +     VP    Y   + GL  A + DEA  +   M E
Sbjct: 422 NILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLE 481

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + + P VV +  +I   S AG   +A K    M   G+VP +   ++++ G    G L +
Sbjct: 482 KGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQE 541

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           AR L  ++  +    N   FT+L+ G  + G    A  L+ +ME  G  P    F+A ID
Sbjct: 542 ARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFID 601

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GL KAG +E+A   F +M + G  P  F+                +++   C  G +H+A
Sbjct: 602 GLSKAGLVEEAYEAFSEMSKKGFVPNNFV--------------YNSLIHGLCNCGKLHEA 647

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+  ++ + G LPDI T N +INGFCK G +  A   F E+   G+ PD+VTY TLI G
Sbjct: 648 LKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGG 707

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             +V     A     +M  +G  P    Y   +   C  +K S A ++
Sbjct: 708 YCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTM 755



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 154/632 (24%), Positives = 266/632 (42%), Gaps = 57/632 (9%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G+       ++LE   +M+E   +P     + +  +  R   +     +   M++ 
Sbjct: 213 TLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRD 272

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P    F+++I    + G   VA  +L  M +    P+ + Y I+I+      R  +A
Sbjct: 273 GPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDA 332

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
                 M  +GC P  + ++ ++  FC    V EA  +    ++ G  P +  Y+ L+ G
Sbjct: 333 LGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSG 392

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            F+A+   +A   Y +M ++ I PD   + +++ G  + GK  D+ +L  D     +VPD
Sbjct: 393 YFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPD 452

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+  + G C  G LD+A     ++ ++   P+   F  +I    R G  D+A K + 
Sbjct: 453 CSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYK 512

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVH 459
            M   G  PS    ++++ GL K G L++A  L YKM    +  N   F  L  G  +V 
Sbjct: 513 IMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVG 572

Query: 460 DKASLQTM-------------------VEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           D A   ++                   ++    AGL+ +AY+   ++++ G +P+   YN
Sbjct: 573 DTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYN 632

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           SLI+G C  G ++ ALKL +E++ KGL PD  T   +ING  +  R + AF  F +M   
Sbjct: 633 SLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHI 692

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           G TP    Y +L+   C+                         M S +EFL K       
Sbjct: 693 GVTPDTVTYNTLIGGYCKVL----------------------DMVSADEFLNKMYASGW- 729

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
                      D  +  Y I + G C   ++  A+ +   L+    +    +   +++ +
Sbjct: 730 -----------DPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAV 778

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           C    LD AM +    LK  F+      N LL
Sbjct: 779 CT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLL 809



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 229/481 (47%), Gaps = 16/481 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +I+ +   G+  +A + F  ++E    P+V +YN +++  F+ +    A  +Y EM
Sbjct: 350 TFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEM 409

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P+  TF++L+ G  K GK   + ++  + +   ++P+   Y + ++GLC   + 
Sbjct: 410 RDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQL 469

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA +    M + G  P  VA+N+++  + +    D A    +     G VP   + S +
Sbjct: 470 DEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSM 529

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL +  R  EA     KM ++ +  + V + V++ G  + G    A  L  +M  RGI
Sbjct: 530 LLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGI 589

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   ++A I G    GL+++A     E+ K+  +PN   +  LI G+C  G + +A K
Sbjct: 590 CPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L  +M + G  P +   N +I+G CK G ++ A   F +M  IG  P             
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTP------------- 696

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T++  YC    +  A + L ++  SG  PDI TYN  I GFC    I+ A+ +
Sbjct: 697 -DTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTM 755

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             EL   G+ P++VTY T++N +   D  + A  +  ++ +    P+      L++  C+
Sbjct: 756 LDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCK 814

Query: 579 R 579
           +
Sbjct: 815 Q 815



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 154/332 (46%), Gaps = 45/332 (13%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           DL ++ +D+     + V    F VL+ GY+KVGD   A                      
Sbjct: 544 DLLYKMIDK----GLPVNKVAFTVLLDGYFKVGDTAGAH--------------------- 578

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
                         +++YEM      P+ + FS  I+GLSK+G  E A +   EM+++G 
Sbjct: 579 --------------SLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGF 624

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +PN F Y  +I GLC   +  EA +L  +M+  G  PD    N ++NGFCK  R+  A  
Sbjct: 625 VPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFD 684

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
                   G  P   +Y+ LI G  +      A  +  KM+    +PD+  Y + I+G  
Sbjct: 685 AFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFC 744

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
            + K+  A+ +L ++   G+VP+T  YN ++   C   +LD+A  L  ++ K   +PN  
Sbjct: 745 SSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLKMAFVPNVV 803

Query: 380 TFTILICGMCRNGMVDDA----QKLFNKMEKA 407
           T  +L+   C+ GM + A    QKL NK+ +A
Sbjct: 804 TTNVLLSHFCKQGMPEKALIWGQKL-NKLLRA 834



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 224/535 (41%), Gaps = 31/535 (5%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           DF   N L+ GF       E+L +L    + G  P   + S L   L R   Y   +   
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           R M  +   P    + +MI    + G ++ A  LL  M +    PD Y YN LI  +   
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIR 326

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G    A      + K    P+  TF+ +I   C  G V +A+K+F  +++ G  P+V M+
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386

Query: 417 NALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKA---------SL 464
           N L+ G  KA ++ +AN+L+ +M    I  +   F  L  G  +   +A         SL
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446

Query: 465 QTMVEQ----------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
            ++V             C AG + +A + L  + E G  P ++ +NS+I  + + G  + 
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDN 506

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A K +K + + GL P S T  +++ GL +  R ++A  +  +M   G   +   +  L+ 
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566

Query: 575 WSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD---FKL 630
              +    + A SLW +   R I          I+   + G VE A +   EM    F  
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVP 626

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           N+F    Y   + GLC  G++ EAL +   + +   +    +   +I+G CK G +  A 
Sbjct: 627 NNFV---YNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAF 683

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           D F      G  + P    Y      + K    V A   L +M + G+D D   Y
Sbjct: 684 DAFAEMHHIG--VTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTY 736



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 186/446 (41%), Gaps = 51/446 (11%)

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
             K E D  +   ++RG   +    +++++LS MRE G+ P +   + L +    +G   
Sbjct: 201 HHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYG 260

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
               L   + +    P  H F I+I   C+ G +  A+ L   M K  C P V  +N LI
Sbjct: 261 SVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILI 320

Query: 421 DGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           +     G    A   L   ++ G  P+L               +  T++  +C  G + +
Sbjct: 321 NAYRIRGRTSDALGFLHLMIKNGCKPSLI--------------TFSTIITAFCNEGNVVE 366

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A KI   + E G  P++  YN+L++G+ K  ++  A  L++E++ KG+ PD  T+  L+ 
Sbjct: 367 ARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVA 426

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  +  +E D++ +F     +   P  ++Y             S+A   W       +G+
Sbjct: 427 GNYKYGKEADSYELFRDWSLSSLVPDCSLY-----------DVSVAGLCW-------AGQ 468

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            DE+M+ +E+ L+KG   + +          N   +A Y+       + G    A   + 
Sbjct: 469 LDEAMQFLEDMLEKGMPPSVV--------AFNSV-IAAYS-------RAGFEDNAHKAYK 512

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           +++    + +  +C  ++ GL K+G L  A D+    +  G  +       LL       
Sbjct: 513 IMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVG 572

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLY 745
           D    H+  L   M++ G   DA  +
Sbjct: 573 DTAGAHS--LWYEMEARGICPDAIAF 596


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 189/760 (24%), Positives = 337/760 (44%), Gaps = 56/760 (7%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR-------------KRLRSFASNSAVI 70
           PL P L +  +  V +   +P      F  A  R              R R F    A++
Sbjct: 67  PLTPALLQAALRRVRL---DPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALL 123

Query: 71  SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
           S L  P+   L+    +  R    S VS  F +L+  +   G    AL  F  M +  C+
Sbjct: 124 SSL-PPHAEPLFPHLAEVYRDFTFSAVS--FDLLLRAHADAGQLSSALNVFDGMGKVGCR 180

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +   N +LN   +     +A  VY +M     LP+  T +++     + G+   A++ 
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           ++EM   G+  N   Y  V+   C +   ++A R+   ++  G SP+ V Y  L+ G+CK
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 251 LRRVDEALALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
             R++EA  +++  ++ G  V    +Y  +I+G  +  R D+A     +M +  I  ++ 
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y  MI GL + G++++  K+L +M + G+ PD Y YN LI G+C  G + +A  +   +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            +      T T+  L+ G C    +DDA +L+  M K G  P+    + L+DGL KAG+ 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 430 EKANLLFYKM---EIGKNPTLFLRLSQGGNRVH-------------------DKASLQTM 467
           E+A  L+ +     + KN   F  +  G  ++                    D  + +T+
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
            + YC  G +  A  ++ ++   G  P +  +NS I G       +    +  E+  +GL
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+ VTYG LI G  +     +A  ++ +M  NG  P+  +  +LM+   +  K   A +
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-N 659

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L LQ L +I      S+ +IE      ++ + +  + + +    +     + + + GLC+
Sbjct: 660 LVLQKLVNIDMIPGCSISTIE----IDKISHVVDTIADGNPHSANVM---WNVIIFGLCK 712

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G++ +A ++F  L   + +    +   LIHG    G +D A  +    L  G  L P +
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG--LTPNI 770

Query: 708 CNYLLRSLLFS--KDNKKVHAYHLLCRMKSVGYDLDACLY 745
             Y   SL++   K  K   A +L  +++S G   +   Y
Sbjct: 771 ITY--NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 260/549 (47%), Gaps = 76/549 (13%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR- 145
           +E+R   + V   V+  +I+G  K+G  E+  +   +M++   +PD Y YN +++   R 
Sbjct: 348 NEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCRE 407

Query: 146 ---KQLFLL-------------------------------ALAVYYEMVKLNCLPNIVTF 171
              ++ F +                               AL +++ M+K    PN ++ 
Sbjct: 408 GSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISC 467

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L++GL K+GKTE A+ +  E   RG+  N  T+  VI+GLC+I R  EA  L  +MK+
Sbjct: 468 STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C PD + Y  L +G+CKL ++  A  L+   E  GF P +  ++  I G F AK++ +
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               + +M    + P++V YG +I G  + G + +A  L  +M   G+ P+ +  +AL+ 
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLP----------------------NTHT----FTILI 385
            F   G +D+A  +  ++   D +P                      N H+    + ++I
Sbjct: 648 CFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVII 707

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKN 444
            G+C++G + DA+ LF  +      P    +++LI G   +G +++A +L    +  G  
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P +               +  +++   C +G + +A  +  +L   G  P+ ITYN+LI+
Sbjct: 768 PNII--------------TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            +CK G    A KL +++  +G++P  +TY  LI GL      E+A ++  QM +N   P
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873

Query: 565 SPAVYKSLM 573
           +   Y +L+
Sbjct: 874 NYITYCTLI 882



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 168/653 (25%), Positives = 291/653 (44%), Gaps = 52/653 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++E+    + V    +  ++  Y  +G  E A      ++     P+V  Y  ++    +
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 146 KQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                 A  V  EM +  + + + V + ++ING  + G+ + A ++ +EM   GI  N F
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+GLC++ R +E  ++  +M+D G  PD  +YN L++G+C+   + +A  + R  
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            ++G      +Y+ L+ G       D+A   +  M +  + P+ +    ++ GL +AGK 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A+ L  +   RG+  +   +N +I G C +G + +A  L   + +    P++ T+  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN--------------------------- 417
             G C+ G +  A  L NKME  G  PSV MFN                           
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 418 --------ALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLS------QGGNRVHDKA 462
                   ALI G CK G L +A NL F  +  G NP +F+  +      + G       
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 463 SLQTMVEQYCTAGL------IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            LQ +V      G       I K   ++  +A+       + +N +I G CK G I  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+ L+ K   PD+ TY +LI+G       ++AF +   M   G TP+   Y SL+   
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 577 CRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           C+  K S A +L+  LQ  + IS         I+E+ ++G+   A +   +M  +     
Sbjct: 781 CKSGKLSRAVNLFNKLQS-KGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPT 839

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           +  Y+I + GLC  G ++EA+ +   ++E        +   LIHG  K G ++
Sbjct: 840 VITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 892



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 201/445 (45%), Gaps = 27/445 (6%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S +T+   + K    +     +     R   ++  + + VI+ L K        + LD 
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++       S  +  L  GY K+G    A     KM+     P V ++N+ +   F  + 
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           +     ++ EM      PN+VT+  LI G  K G    A  +  EM   G+ PN F  + 
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 209 VISGLCQINRADEAYRLFLKMKD----SGCS------------PDFVA----------YN 242
           ++S   +  + DEA  +  K+ +     GCS             D +A          +N
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++ G CK  R+ +A +L  S     F+P   +YS LI G   +   DEA++    M   
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA 764

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + P+++ Y  +I GL ++GK+  A+ L + ++ +GI P+   YN LI  +C  G   +A
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEA 824

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L+ ++ +    P   T++ILI G+C  G +++A KL ++M +    P+   +  LI G
Sbjct: 825 FKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHG 884

Query: 423 LCKAGELEKANLLFYKMEI-GKNPT 446
             K+G +E+ + L+ +M I G  PT
Sbjct: 885 YIKSGNMEEISKLYDEMHIRGLLPT 909



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 99/183 (54%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           LP+  T+S LI+G + SG  + A  + D M   G+ PN  TY  +I GLC+  +   A  
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           LF K++  G SP+ + YN L++ +CK  +  EA  L +   ++G  P + +YS LI GL 
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLC 851

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
                +EA     +M E  ++P+ + Y  +I G  ++G +++  KL  +M  RG++P  +
Sbjct: 852 TQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911

Query: 345 CYN 347
             N
Sbjct: 912 IGN 914



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 59/119 (49%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            ++L+S  +S     +  LI  Y K G   +A +   KM E   QP V  Y+ ++     
Sbjct: 793 FNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCT 852

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +     A+ +  +M++ N  PN +T+  LI+G  KSG  E   K+ DEM  RG+LP  +
Sbjct: 853 QGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 271/577 (46%), Gaps = 46/577 (7%)

Query: 25  LLPFLSKTTVTSVIMKTKN-PQVGFRFFIWAAKRKR-LRSFASNSAVISMLLKPNGFDLY 82
           +LP ++ + V  VI K +N PQ+   F  W  ++K  L S  S   VI +L+    +D  
Sbjct: 1   MLPNMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDA 60

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGY-----------------YKVGDCEKALESFGKMK 125
              +  L + N     +V   LIS Y                  ++G  E A E   K++
Sbjct: 61  LFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQ 120

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
                  V+ +N  L+   +         +Y EMV    + N+ TF+L+I  L K G+  
Sbjct: 121 LDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLV 180

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD-SGCS--PDFVAYN 242
            A+ ++    + GI PN  T+ ++I G  ++   D A +L  KM+  SGCS  PD V YN
Sbjct: 181 EAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYN 240

Query: 243 ALLNGFCKLRRVDEALALLRSFEKD----GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + +NGFCK+      LA+   F+K+       P + +Y+ L+DG  R    + A+    +
Sbjct: 241 SFVNGFCKIGN----LAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDE 296

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           + E+ + P+ V+Y  +I  LS  G ++ A  LLSDM ++ I PD + Y+ +I+G C  G 
Sbjct: 297 LVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGY 356

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L++A      I +   + +  +  ++I  +CR+  +  A++L   M   G  P V  F  
Sbjct: 357 LNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGT 416

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LID  CK G++E A  ++ KM + G+ P L +                +++  +   G  
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLI--------------YNSVINGFAKEGSF 462

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A  ++  L   G L D++TYN+LI+G+C  G I+ A  LF E++  G+    VTY TL
Sbjct: 463 DPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTL 521

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           IN L +      A  +   M   G  P    Y  L+T
Sbjct: 522 INSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILIT 558



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 243/513 (47%), Gaps = 58/513 (11%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           QI   + AY +  K++  G      A+N  L+   KL  V+    + +     G++  + 
Sbjct: 105 QIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVN 164

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ +I  L +  R  EA +   +  +  I P+VV + ++I G  + G +  A+KL+  M
Sbjct: 165 TFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKM 224

Query: 335 RERG---IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                  + PD+  YN+ + GFC +G L  A   + E+  ++  PN  T+  L+ G  R 
Sbjct: 225 EVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRV 284

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +++A +L +++ + G  P+  ++N++I  L   G++E A+LL   M I K        
Sbjct: 285 GSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDM-IDK-------- 335

Query: 452 SQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                R++ D+ +   ++E  C  G +++A+K L  + E   + D  ++N +IN  C+  
Sbjct: 336 -----RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSN 390

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N+ GA +L   + ++GL PD VT+GTLI+   +  + E+A +++ +M + G  P+  +Y 
Sbjct: 391 NLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYN 450

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           S+                                  I  F ++G  + AI  L++   ++
Sbjct: 451 SV----------------------------------INGFAKEGSFDPAIL-LIDTLRRM 475

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
             F +  Y   + G C  G++ +A  +FS +     + +  +   LI+ LCK G++  A 
Sbjct: 476 GLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAK 535

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
           +     L    +LR  + +Y+  ++L +  +KK
Sbjct: 536 E-----LMKMMVLRGLIPDYVTYTILITSFSKK 563



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 1/330 (0%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY +VG  E A     ++ E    P+  IYN++++    +     A  +  +M+
Sbjct: 274 YATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMI 333

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+  T+S++I GL ++G    A K L  + +  ++ + F++ +VI+ LC+ N   
Sbjct: 334 DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLA 393

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A +L   M   G  PD V +  L++  CK  +V+ A+ +     K G  P L  Y+ +I
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  +   +D A      +    +  DVV Y  +I G    GK+  A  L S+MR  GI+
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGIL 512

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
                YN LI   C  G + QA+ L   +  R  +P+  T+TILI    +    ++  +L
Sbjct: 513 ASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            + M   G  P    +  ++  L +   +E
Sbjct: 573 HDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 191/459 (41%), Gaps = 71/459 (15%)

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEA-YAWYRKMFEEKIEPDVVL------------ 310
            EK   +  + S   +I  L  +KRYD+A +     M    I P  VL            
Sbjct: 32  LEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNLMNVNGISPLEVLDALISSYDICKS 91

Query: 311 ----YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
               +  ++R  ++ G  + A ++++ ++  G     + +N  +     L  +++   + 
Sbjct: 92  SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMY 151

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+     + N +TF ++I  + + G + +A  +  +  K G +P+V  FN +IDG  K 
Sbjct: 152 KEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKM 211

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G ++ A  L  KME+                              C+             
Sbjct: 212 GAMDLALKLVRKMEVMSG---------------------------CSVK----------- 233

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                  PD +TYNS +NGFCK+GN+  A +  KE+  K + P+  TY TL++G  RV  
Sbjct: 234 -------PDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGS 286

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E+AFR+  ++ + G  P+  +Y S++ W         A SL L  + D     D+   S
Sbjct: 287 LENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGA-SLLLSDMIDKRIYPDQFTYS 345

Query: 607 --IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
             IE   + G +  A   +Q +LEM    + F    + + +  LC+   +  A  + + +
Sbjct: 346 IVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFS---HNVVINYLCRSNNLAGAKQLLANM 402

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
                +    +   LI   CK G ++ A+ V+   +K G
Sbjct: 403 YVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTG 441



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 5/250 (2%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVL 104
            F+F     +   +R   S++ VI+ L + N      Q L  +      +V DV  F  L
Sbjct: 360 AFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVR--GLVPDVVTFGTL 417

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I  + K G  E A++ + KM +   +P++ IYN+V+N  F K+       +  + ++   
Sbjct: 418 IDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVIN-GFAKEGSFDPAILLIDTLRRMG 476

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           L ++VT++ LI+G    GK + A  +  EM   GIL +  TY  +I+ LC+     +A  
Sbjct: 477 LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKE 536

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L   M   G  PD+V Y  L+  F K    +E + L       G VP   +Y  ++  L 
Sbjct: 537 LMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLL 596

Query: 285 RAKRYDEAYA 294
           + +  +  Y 
Sbjct: 597 QEESVEFDYG 606


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 173/675 (25%), Positives = 312/675 (46%), Gaps = 55/675 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +++ Y K G C+ AL     M++   + D+Y YN +++   + +    A  +   M
Sbjct: 266 TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRM 325

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++N  P+  +++ LI+G    GK  +AI + ++M ++ + P+  TYT +I G C+  R 
Sbjct: 326 REVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRT 385

Query: 220 DEAYRLFLKMKDSGC--------------------SPDFVAYNALLNGFCKLRRVDEALA 259
           DEA R+  +M+ +G                      PD + Y+AL+N       + EA  
Sbjct: 386 DEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINE----GMIAEAEQ 441

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
             +   +      + S++C+ID   +     EA++ Y  M      PD+  YG ++RGL 
Sbjct: 442 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 501

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G +  A + +  + E+    D    N L+ G C  G LD+A  L  ++  R+ LP+T+
Sbjct: 502 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 561

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+TIL+ G C+ G V  A  L   M + G  P    +  L++GL   G+++ A+ +F   
Sbjct: 562 TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF--Q 619

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           EI     L+           D  +  +M+  Y   G I++  +++  + E+   P   +Y
Sbjct: 620 EIICKEGLY----------ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASY 669

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N L++G+ K G ++  L L++++  +G++PD+VTY  LI GL      E A +   +M  
Sbjct: 670 NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 729

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSL--WLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            G  P    +  L+     + K S A  L  ++++L  +S      +  +   ++K    
Sbjct: 730 EGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLH-MSPSSKTYVAMVNGLIRK---- 784

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQDGQVKEALNIFSVLVECKAIVTPPSC 673
           N +Q   E+   + +  L P     I L    C+ G +  A   F +  + KA+   PS 
Sbjct: 785 NWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGA---FELKEDMKALGVVPSE 841

Query: 674 V---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           V    ++ GLCK G ++ A+ VF   ++ G +  P +  +        K+ K   A+HL 
Sbjct: 842 VAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV--PTIATFTTLMHGLCKEFKIDDAFHLK 899

Query: 731 CRMKSVGYDLDACLY 745
             M+S G  +D   Y
Sbjct: 900 QLMESCGLKVDVVTY 914



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 230/500 (46%), Gaps = 53/500 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G  + G   +A E    + E  C  D    N +L    +      AL +  +MV  N
Sbjct: 496 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LP+  T+++L++G  K GK   A+ +L  M ++G++P+   YT +++GL    +   A 
Sbjct: 556 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 615

Query: 224 RLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +F ++    G   D +AYN+++NG+ K  +++E   L+R+  ++   P   SY+ L+ G
Sbjct: 616 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 675

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +  +       YR M +E I+PD V Y ++I GL E G ++ A+K L  M   G+ PD
Sbjct: 676 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 735

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM-------------- 388
              ++ LIK F +   +  A  L   +      P++ T+  ++ G+              
Sbjct: 736 NLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILH 795

Query: 389 ---------------------CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                                CR G +D A +L   M+  G  PS    ++++ GLCK G
Sbjct: 796 DMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 855

Query: 428 ELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           ++E+A ++F   M  G  PT+              A+  T++   C    I  A+  L Q
Sbjct: 856 KVEEAIIVFSSIMRAGMVPTI--------------ATFTTLMHGLCKEFKIDDAFH-LKQ 900

Query: 487 LAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           L ES  L  D++TYN LI G C    I  AL L++E++ KGL P+  TY TL   +    
Sbjct: 901 LMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 960

Query: 546 REEDAFRIFGQMPQNGCTPS 565
             +D  ++   +   G  PS
Sbjct: 961 TMQDGEKLLKDIEDRGIVPS 980



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 225/481 (46%), Gaps = 23/481 (4%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           DV  +N +++   ++   L A +VY  MV+    P+I T+  L+ GL + G    A + +
Sbjct: 454 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             + ++    ++ T   ++ G+C+    DEA  L  KM      PD   Y  LL+GFCK 
Sbjct: 514 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 573

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA-YAWYRKMFEEKIEPDVVL 310
            +V  AL LL+   + G VP   +Y+CL++GL    +   A Y +   + +E +  D + 
Sbjct: 574 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 633

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  M+ G  + G++ +  +L+ +M E  + P +  YN L+ G+   G L +   L  ++ 
Sbjct: 634 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 693

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K    P+  T+ +LI G+C  G+++ A K   KM   G FP    F+ LI    +  ++ 
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 753

Query: 431 KANLLFYKME-IGKNPTL---------FLR---LSQGGNRVHD--KASLQTMVEQY---- 471
            A  LF  M+ +  +P+           +R   L Q    +HD  ++ LQ     Y    
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALI 813

Query: 472 ---CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G I  A+++   +   G +P  +  +S++ G CK G +  A+ +F  +   G+ 
Sbjct: 814 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMV 873

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P   T+ TL++GL +  + +DAF +   M   G       Y  L+T  C ++    A  L
Sbjct: 874 PTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDL 933

Query: 589 W 589
           +
Sbjct: 934 Y 934



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 158/663 (23%), Positives = 287/663 (43%), Gaps = 87/663 (13%)

Query: 129 CQP-DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           C P +++  + ++N   ++   L A A  + M +     ++ + + ++N L    K+E  
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
              L E   R    +  T  IV++ LC   +  +A  +  KMK+    P+ V YN +LN 
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNW 273

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           + K  R   AL +L   EK+G    L +Y+ +ID L + KR   AY   ++M E  + PD
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---- 363
              Y  +I G    GK+  A+ + + M  + + P    Y ALI G+C  G  D+AR    
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 364 SLQV------EIWKRDSL----------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            +Q+      E+ K   +          P+  T++ LI      GM+ +A++    M + 
Sbjct: 394 EMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQFKQYMSRM 449

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-------EIGKNPTLFLRLSQGGNRVH- 459
                V  FN +ID  C+ G + +A  ++  M       +I    +L   L QGG+ V  
Sbjct: 450 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 509

Query: 460 --------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         D+ +L T++   C  G + +A  +  ++     LPD  TY  L++G
Sbjct: 510 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 569

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL-------------QRVDREEDAF- 551
           FCK G +  AL L + +  KGL PD++ Y  L+NGL             Q +  +E  + 
Sbjct: 570 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYA 629

Query: 552 ----------------------RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
                                 R+   M +N   PS A Y  LM    ++ + S    L+
Sbjct: 630 DCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLY 689

Query: 590 LQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
              +++    D+ + +  I    + G +E A++ L +M  +        + I +    + 
Sbjct: 690 RDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEK 749

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            ++  AL +FS +       +  + V +++GL ++ +L  + ++    +++G  L+P+  
Sbjct: 750 SKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESG--LQPKHT 807

Query: 709 NYL 711
           +Y+
Sbjct: 808 HYI 810



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 117/241 (48%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI  + +      AL+ F  MK     P    Y A++N   RK     +  + ++MV
Sbjct: 739 FDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMV 798

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    P    +  LIN   + G  + A ++ ++M   G++P++   + ++ GLC+  + +
Sbjct: 799 ESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 858

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F  +  +G  P    +  L++G CK  ++D+A  L +  E  G    + +Y+ LI
Sbjct: 859 EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 918

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL   K   +A   Y +M  + + P++  Y  +   +   G ++D  KLL D+ +RGIV
Sbjct: 919 TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 978

Query: 341 P 341
           P
Sbjct: 979 P 979



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/263 (18%), Positives = 99/263 (37%), Gaps = 44/263 (16%)

Query: 11  ILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVI 70
           +L+ V P   A + L+   S+ +      K  N    F +  W       +++    A++
Sbjct: 728 VLEGVFPDNLAFDILIKAFSEKS------KMSNALQLFSYMKWLHMSPSSKTYV---AMV 778

Query: 71  SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
           + L++ N     ++ L ++    +      +  LI+   +VGD + A E    MK     
Sbjct: 779 NGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVV 838

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA--- 187
           P     ++++    +      A+ V+  +++   +P I TF+ L++GL K  K + A   
Sbjct: 839 PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHL 898

Query: 188 --------------------------------IKMLDEMTQRGILPNKFTYTIVISGLCQ 215
                                           + + +EM  +G+LPN  TY  +   +  
Sbjct: 899 KQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYA 958

Query: 216 INRADEAYRLFLKMKDSGCSPDF 238
                +  +L   ++D G  P +
Sbjct: 959 TGTMQDGEKLLKDIEDRGIVPSY 981


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 254/589 (43%), Gaps = 85/589 (14%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI--- 142
            DE+    V     V+ + ISG  K+ D ++AL+  GKM+E   +P    Y++V+++   
Sbjct: 208 FDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVK 267

Query: 143 --------AFRKQLFLL-------------------------ALAVYYEMVKLNCLPNIV 169
                     + Q+ L                          AL ++ E+V     P  V
Sbjct: 268 VRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNV 327

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL---------------- 213
           T+ +LI G    G T+   K+  +M ++G+LP+ + + +VI GL                
Sbjct: 328 TYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLV 387

Query: 214 ------------------CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                             C+  +  EA  L+ KMK++G  P  V Y++LL G+C+  R+D
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMD 447

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EAL L       GF P   +Y+ L+ G  + K +D AYA   +M +  +      Y ++I
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL    +V +  ++L      G VP T  YN++I GF   G++  A  +  ++ K+   
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGIT 567

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NL 434
           PN  T+T  I G CR    D A KL   + + G  P +  +NA ID  CK G + +A + 
Sbjct: 568 PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHF 627

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L   ++ G  P              D     + V  Y    ++ +A K    + +   + 
Sbjct: 628 LVLLLKDGLTP--------------DVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D   Y +LI+GF KVGN+  AL+L+ E+    + PD  T+  L +GL R    + A R+ 
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             M +   +P+   Y  L+    R  K   AF L  + L      DD +
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 164/642 (25%), Positives = 288/642 (44%), Gaps = 27/642 (4%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F +M+   C  D  +Y+ V+    R  +   A+ ++ EM      P+   +++ I+
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCS 235
           GL K    + A+++L +M + G  P + TY+ V+  L ++ R DEA RL  +M   +G  
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKK 288

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            D V    L++G+C    V +AL L      DG  P   +Y  LI G       DE Y  
Sbjct: 289 MDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKL 348

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            R+M E+ + P    + ++I+GL    + KDA+ LL  + + G VPD + Y  LI   C 
Sbjct: 349 CRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG-VPDVFTYGCLIHWLCK 407

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              L +A +L  ++ +    P+  T+  L+ G C  G +D+A KL+++M   G  P+   
Sbjct: 408 HQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +  L+ G  K    + A  L  +M             Q G    D  +   ++       
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMR------------QNGVSCGDY-TYNILINGLYMVN 514

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +  ++L +    G +P  +TYNS+INGF K G +  A  ++++++ KG+ P+ VTY 
Sbjct: 515 RVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           + I+G  R +  + A ++   + ++G  P  A Y + +   C++   S A    +  L+D
Sbjct: 575 SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634

Query: 596 ISGRD----DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
               D    +  +   +      E       +++    + D ++  YT  + G  + G V
Sbjct: 635 GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV-VADTEI--YTTLIDGFSKVGNV 691

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             AL ++S ++    I    +   L HGLC+ G +D A  +     +    + P +  Y 
Sbjct: 692 AFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR--LDVSPNIVTYN 749

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY---PKTKS 750
           +      +D K   A+ L   M S G   D   Y   P+T +
Sbjct: 750 MLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRTNN 791



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 153/613 (24%), Positives = 249/613 (40%), Gaps = 93/613 (15%)

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           Y  MV    +P+  + + L+   +       A+ + DEM  +G   +   Y +VI    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                +A RLF +M  +G  PD   Y   ++G CKLR  D AL +L    + GF P   +
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS ++D L + +R DEA                              ++KD M L +   
Sbjct: 258 YSSVVDVLVKVRRMDEAL-----------------------------RLKDQMLLAT--- 285

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G   D      L+ G+C  G + +A  L  E+      P   T+ +LI G    GM D
Sbjct: 286 --GKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTD 343

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQG 454
           +  KL  +M + G  PS   FN +I GL +    + A  LL   ++ G            
Sbjct: 344 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG------------ 391

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V D  +   ++   C    +H+A  +  ++ E+G  P I+TY+SL+ G+C+ G ++ 
Sbjct: 392 ---VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE 448

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           ALKL+ E+  KG  P+ VTY TL+ G  +    ++A+ +  +M QNG +     Y  L+ 
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN 508

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                            Y+ +     DE +K    FL +G V   +              
Sbjct: 509 G---------------LYMVNRVCEVDEMLK---RFLSEGFVPTTMT------------- 537

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMDV 692
              Y   + G  + G +  A  ++  +   K  +TP   +    I G C+    DLA+ +
Sbjct: 538 ---YNSIINGFVKAGMMGSAFGMYRQMR--KKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
            +Y  ++G  ++P +  Y      F K      A H L  +   G   D  +Y    S +
Sbjct: 593 LIYVRRDG--IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVY---NSFV 647

Query: 753 PGPWNTREMENMS 765
            G  N + M   S
Sbjct: 648 TGYKNLKMMAEAS 660



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 39/238 (16%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + F +Y Q    +R   ++     +   I GY +   C+ A++    ++    QPD+  Y
Sbjct: 553 SAFGMYRQ----MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAY 608

Query: 137 NAVLN---------------------------------IAFRKQLFLLALA--VYYEMVK 161
           NA ++                                 +   K L ++A A   YY M+K
Sbjct: 609 NAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIK 668

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              + +   ++ LI+G SK G    A+++  EM    ++P+  T+T +  GLC+    D 
Sbjct: 669 QRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDG 728

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           A RL   M+    SP+ V YN L+N   +  ++ EA  L       G VP   +Y  L
Sbjct: 729 AKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 231/487 (47%), Gaps = 27/487 (5%)

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGK 183
           + F  QP    YN VL++  R      ALA+Y  MV  + +P    TF +    L + G+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A+ +L  M + G +P+   Y  VI  LC      EA  L  +M   GC+ D   ++ 
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           ++ G C L RV EA  L+      G +P + +Y  L+ GL R ++ DEA    R M    
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRV 306

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            E +VVL+  +I G    GK+ +A +L   M  +G  PD + Y+ L+ G C LG +  A 
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+ K+   PN  T+TI++   C+NGM DD + L  +M   G   +   +N +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 424 CKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGGNRVHDKASLQTMVEQYCTAG- 475
           CK G +++A  L  +M   G NP      T+   L         +   + ++E+   A  
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 476 -----LIHK---------AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                +IH          A ++  ++   G   D+++YN LI   CK GN++ +L L +E
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +  KG++P++V+Y  LI+ L +  R  DA  +  QM   G  P    Y +L+   C+   
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 582 FSLAFSL 588
              A +L
Sbjct: 607 MHAALNL 613



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 245/525 (46%), Gaps = 53/525 (10%)

Query: 62  SFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           SF S + V+S+L + +       LY + +   R   V   +  F V      ++G  ++A
Sbjct: 138 SFRSYNVVLSVLARADCHADALALYRRMVHRDR---VPPTTFTFGVAARALCRLGRADEA 194

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L     M    C PD  +Y  V++    +     A  +  EM+ + C  ++ TF  ++ G
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA--------------- 222
           +   G+   A +++D M  +G +P   TY  ++ GLC++ +ADEA               
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLF 314

Query: 223 ----------------YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
                             L+  M   GC PD   Y+ L++G CKL R+  A+ LLR  EK
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            GF P + +Y+ ++    +   +D+  A   +M  + +  +   Y  MI  L + G++ +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM L+ +MR +G  PD   YN +I   C+   +++A  +   + +   + N  T+  +I 
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
            + R+G   DA +L  +M   GC   V  +N LI  +CK G ++++ +L  +M E G  P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                         +  S   ++ + C    +  A ++  Q+   G  PDI+TYN+LING
Sbjct: 555 --------------NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLING 600

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            CK+G ++ AL L ++L  + + PD +TY  LI+   +V   +DA
Sbjct: 601 LCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 645



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 3/370 (0%)

Query: 87  DELRS--GNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           DE R+  G V  ++ V F  +I G    G   +A E +  M    CQPD + Y+ +++  
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      A+ +  EM K    PN+VT++++++   K+G  +    +L+EM+ +G+  N 
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             Y  +I  LC+  R DEA  L  +M+  GC+PD  +YN ++   C   +++EA  +  +
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             ++G V    +Y+ +I  L R  R+ +A    ++M       DVV Y  +I+ + + G 
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V  ++ LL +M E+GI P+   YN LI   C    +  A  L  ++  +   P+  T+  
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G+C+ G +  A  L  K+      P +  +N LI   CK   L+ A +L  +     
Sbjct: 597 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 656

Query: 444 NPTLFLRLSQ 453
            P    R+ Q
Sbjct: 657 CPVGDRRIMQ 666



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 210/477 (44%), Gaps = 25/477 (5%)

Query: 256 EALALLRSFEKD-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGV 313
            AL LL    +  G  P   SY+ ++  L RA  + +A A YR+M   +++ P    +GV
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
             R L   G+  +A+ LL  M   G VPD   Y  +I   CD G + +A +L  E+    
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA------- 426
              + +TF  ++ GMC  G V +A +L ++M   GC P V  +  L+ GLC+        
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 427 ---GELEKANLLFYKMEIG---------KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
              G + + N++ +   IG         +   L+  +   G +  D  +   ++   C  
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP-DAHTYSILMHGLCKL 359

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G I  A ++L ++ + G  P+++TY  +++ FCK G  +    L +E+  KGL  +S  Y
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             +I  L +  R ++A  +  +M   GC P    Y +++   C   +   A  ++   L 
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479

Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           +    +  +  + I   L+ G  ++A++   EM        +  Y   +  +C+DG V  
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +L +   + E        S   LI  LCK   +  A+++    L  G  L P +  Y
Sbjct: 540 SLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG--LAPDIVTY 594



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 139/349 (39%), Gaps = 39/349 (11%)

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN---PTLFLRLSQGGNRVHDKASL 464
           G  PS   +N ++  L +A +     L  Y+  + ++   PT F              + 
Sbjct: 134 GVQPSFRSYNVVLSVLARA-DCHADALALYRRMVHRDRVPPTTF--------------TF 178

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
                  C  G   +A  +L  +A  G +PD + Y ++I+  C  G +  A  L  E+ L
Sbjct: 179 GVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL 238

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G   D  T+  ++ G+  + R  +A R+  +M   GC P    Y  L+   CR R+   
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADE 298

Query: 585 AFSLWLQYLRDISGRDDESM-----KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
           A        R + GR  E         I   L +G++  A +    M  K        Y+
Sbjct: 299 A--------RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYS 350

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYT 696
           I + GLC+ G++  A+ +   + E K     P+ V    ++H  CK G  D    +    
Sbjct: 351 ILMHGLCKLGRIGSAVRLLREM-EKKGFA--PNVVTYTIVLHSFCKNGMWDDTRALLEEM 407

Query: 697 LKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              G  L  +  N ++ +L   KD +   A  L+  M+S G + D C Y
Sbjct: 408 SAKGLTLNSQGYNGMIYAL--CKDGRMDEAMGLIQEMRSQGCNPDICSY 454


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 158/580 (27%), Positives = 264/580 (45%), Gaps = 54/580 (9%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L   +    V  V+       V  +FF WA KR+     +S+ 
Sbjct: 71  ILKIFKWGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKWAGKRRNFEHDSSSF 130

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV-LISGYYKVGDCEKALESFGKMK 125
            A+I  L +   +   W+T+ ++   +  V+S V+   ++    K     KAL  F ++K
Sbjct: 131 MALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIK 190

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKT 184
              C+P    YN+++ +  ++        +Y EM    NC P+ VT+S LI+   K G  
Sbjct: 191 GRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHY 250

Query: 185 EVAIKMLDEMTQRGILPNK-----------------------------------FTYTIV 209
           + AI++ DEM + G+ P                                     FTYT  
Sbjct: 251 DSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEW 310

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I GL +  R D+AYR+FL M   GC PD V  N+L+N   K+ R++  L L R  E    
Sbjct: 311 IKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQC 370

Query: 270 VPRLGSYSCLIDGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            P + +Y+ +I  LF  K    EA +W+ KM    I P    Y ++I G  +  +++ A+
Sbjct: 371 KPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKAL 430

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            LL +M E+G  P    Y +LI     +   + A  L +E+ +     +   + ++I   
Sbjct: 431 LLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHF 490

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
            + G + +A  LFN+MEK G  P V  +NAL+ G+ +AG +++A  L   M E G +P L
Sbjct: 491 GKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDL 550

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          S   ++      G+  +A ++  ++  S   PD ++YN+++    
Sbjct: 551 --------------NSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLS 596

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
             G    A KL +E+ LKG   +++TY +++  + +VD +
Sbjct: 597 HAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVDED 636



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 160/323 (49%), Gaps = 44/323 (13%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           D Y   LD ++ G      DV  +  LI+   KVG  E  L+ F KM+ + C+P+V  YN
Sbjct: 322 DAYRVFLDMIKDG---CKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYN 378

Query: 138 AVLNIAFRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
            V+   F  +      A ++E +K     P+  T+S+LI+G  K+ + E A+ +L+EM +
Sbjct: 379 TVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDE 438

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS------------------------ 232
           +G  P    Y  +I+ L ++ R + A  LFL++K++                        
Sbjct: 439 KGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSE 498

Query: 233 -----------GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
                      G  PD  AYNAL++G  +   +DEA +LLR+ +++G  P L S++ +++
Sbjct: 499 AVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILN 558

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL R    D A   + KM    I+PD V Y  ++  LS AG  ++A KL+ +M  +G   
Sbjct: 559 GLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEY 618

Query: 342 DTYCYNALIKGFCDLGLLDQARS 364
           +   Y ++++    +G +D+ R+
Sbjct: 619 NNITYTSILEA---VGKVDEDRA 638



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 216/476 (45%), Gaps = 41/476 (8%)

Query: 258 LALLRSFEKDGFVPRL--------GSYSCLIDGLF---------RAKRYDEAYAWYRKMF 300
           +AL+ S ++ GF   +         S +C+I  ++         +AK  ++A + + ++ 
Sbjct: 131 MALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIK 190

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCDLGLL 359
             K +P    Y  MI  L + G ++   ++ ++M   G   PDT  Y+ALI  F  LG  
Sbjct: 191 GRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHY 250

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D A  L  E+ +    P    +T L+    +   V+ A  +  +M+  GC  +V  +   
Sbjct: 251 DSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEW 310

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I GL KAG ++ A  +F  M + G  P + L              + +++      G + 
Sbjct: 311 IKGLGKAGRVDDAYRVFLDMIKDGCKPDVVL--------------INSLINILGKVGRLE 356

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGF--CKVGNINGALKLFKELQLKGLRPDSVTYGT 536
              K+  ++      P+++TYN++I     CK    + A   F++++  G+ P S TY  
Sbjct: 357 VTLKLFRKMESWQCKPNVVTYNTVIKALFECK-APASEAASWFEKMKGCGIAPSSFTYSI 415

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI+G  + +R E A  +  +M + G  P PA Y SL+    + +++  A  L+L+ L++ 
Sbjct: 416 LIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLE-LKEN 474

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            G     + +  I+ F + G +  A+    EM+   +   +  Y   + G+ + G + EA
Sbjct: 475 CGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEA 534

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++   + E        S   +++GL + G  D A+++F   +K+  I++P   +Y
Sbjct: 535 QSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFA-KMKSS-IIKPDAVSY 588



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 208/496 (41%), Gaps = 29/496 (5%)

Query: 99  DVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           D  F+ I   +K G D EKALE      +     +V   +  +N+    Q F  A     
Sbjct: 65  DERFIRILKIFKWGPDAEKALEVLKLKVDHRLVHEVLKIDVEINVKI--QFFKWAGK--- 119

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY-TIVISGLCQI 216
              + N   +  +F  LI+ L ++G      K + +M +         Y + ++  L + 
Sbjct: 120 ---RRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKA 176

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG-FVPRLGS 275
              ++A  +F ++K   C P    YN+++    +   +++   +      DG   P   +
Sbjct: 177 KMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVT 236

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS LI    +   YD A   + +M E  + P   +Y  ++    +  KV+ A+ ++ +M+
Sbjct: 237 YSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMK 296

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           ++G     + Y   IKG    G +D A  + +++ K    P+      LI  + + G ++
Sbjct: 297 DKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLE 356

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGL--CKAGELEKANLLFYKME-IGKNPTLFLRLS 452
              KLF KME   C P+V  +N +I  L  CKA   E A+  F KM+  G  P+ F    
Sbjct: 357 VTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASW-FEKMKGCGIAPSSF---- 411

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   +++ +C    I KA  +L ++ E G  P    Y SLIN   KV   
Sbjct: 412 ----------TYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRY 461

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +LF EL+       +  Y  +I    +  R  +A  +F +M + G  P    Y +L
Sbjct: 462 EAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNAL 521

Query: 573 MTWSCRRRKFSLAFSL 588
           M+   R      A SL
Sbjct: 522 MSGMVRAGMIDEAQSL 537



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 101/456 (22%), Positives = 186/456 (40%), Gaps = 67/456 (14%)

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEI--------W---KRDSLPNTHTFTILICGMC 389
           PD      ++K   D  L+ +   + VEI        W   +R+   ++ +F  LI  + 
Sbjct: 79  PDAEKALEVLKLKVDHRLVHEVLKIDVEINVKIQFFKWAGKRRNFEHDSSSFMALIHSLD 138

Query: 390 RNGMVDDAQKLFNKMEKAG-CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
             G   +  K    M ++  C  S    + ++  L KA  + KA  +FY+++        
Sbjct: 139 EAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIK-------- 190

Query: 449 LRLSQGGNRVHDKASL-QTMVEQYCTAGLIHKAYKILMQLAESGN-LPDIITYNSLINGF 506
                 G +    A+   +M+      G + K ++I  ++   GN  PD +TY++LI+ F
Sbjct: 191 ------GRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAF 244

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K+G+ + A++LF E++  GL P +  Y TL+    ++D+ E A  +  +M   GCT + 
Sbjct: 245 GKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTV 304

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVE-------- 617
             Y   +    +  +   A+ ++L  ++D    D   + S+   L K G +E        
Sbjct: 305 FTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRK 364

Query: 618 --------------NAIQGLLEMDF----------KLNDFQLAP----YTIWLIGLCQDG 649
                           I+ L E             K+    +AP    Y+I + G C+  
Sbjct: 365 MESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTN 424

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++++AL +   + E      P +   LI+ L K    + A ++FL   +N      RV  
Sbjct: 425 RIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYA 484

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +++   F K  +   A  L   M+ +G   D   Y
Sbjct: 485 VMIKH--FGKCGRLSEAVDLFNEMEKLGSKPDVYAY 518


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 193/773 (24%), Positives = 342/773 (44%), Gaps = 82/773 (10%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR-------------KRLRSFASNSAVI 70
           PL P L +  +  V +   +P      F  A  R              R R F    A++
Sbjct: 67  PLTPALLQAALRRVRL---DPDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARALL 123

Query: 71  SMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQ 130
           S L  P+   L+    +  R    S VS  F +L+  +   G    AL  F  M +  C+
Sbjct: 124 SSL-PPHAEPLFPHLAEVYRDFTFSAVS--FDLLLRAHADAGQLSSALNVFDGMGKVGCR 180

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +   N +LN   +     +A  VY +M     LP+  T +++     + G+   A++ 
Sbjct: 181 PSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEF 240

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           ++EM   G+  N   Y  V+   C +   ++A R+   ++  G SP+ V Y  L+ G+CK
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 251 LRRVDEALALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
             R++EA  +++  ++ G  V    +Y  +I+G  +  R D+A     +M +  I  ++ 
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y  MI GL + G++++  K+L +M + G+ PD Y YN LI G+C  G + +A  +   +
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            +      T T+  L+ G C    +DDA +L+  M K G  P+    + L+DGL KAG+ 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           E+A  L+ +       TL   L++      +  +  T++   C  G + +A ++L ++ E
Sbjct: 481 EQALNLWKE-------TLARGLAK------NVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFK----------------------------- 520
               PD +TY +L +G+CK+G +  A  L                               
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587

Query: 521 ------ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
                 E+  +GL P+ VTYG LI G  +     +A  ++ +M  NG  P+  +  +LM+
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
              +  K   A +L LQ L +I      S+ +IE      ++ + +  + + +    +  
Sbjct: 648 CFYKEGKVDEA-NLVLQKLVNIDMIPGCSISTIE----IDKISHVVDTIADGNPHSANVM 702

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              + + + GLC+ G++ +A ++F  L   + +    +   LIHG    G +D A  +  
Sbjct: 703 ---WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759

Query: 695 YTLKNGFILRPRVCNYLLRSLLFS--KDNKKVHAYHLLCRMKSVGYDLDACLY 745
             L  G  L P +  Y   SL++   K  K   A +L  +++S G   +   Y
Sbjct: 760 VMLSAG--LTPNIITY--NSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 165/653 (25%), Positives = 285/653 (43%), Gaps = 71/653 (10%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++E+    + V    +  ++  Y  +G  E A      ++     P+V  Y  ++    +
Sbjct: 241 VEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCK 300

Query: 146 KQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
                 A  V  EM +  + + + V + ++ING  + G+ + A ++ +EM   GI  N F
Sbjct: 301 DGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLF 360

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+GLC++ R +E  ++  +M+D G  PD  +YN L++G+C+   + +A  + R  
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            ++G      +Y+ L+ G       D+A   +  M +  + P+ +    ++ GL +AGK 
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A+ L  +   RG+  +   +N +I G C +G + +A  L   + +    P++ T+  L
Sbjct: 481 EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTL 540

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN--------------------------- 417
             G C+ G +  A  L NKME  G  PSV MFN                           
Sbjct: 541 FDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGL 600

Query: 418 --------ALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLS------QGGNRVHDKA 462
                   ALI G CK G L +A NL F  +  G NP +F+  +      + G       
Sbjct: 601 SPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660

Query: 463 SLQTMVEQYCTAGL------IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            LQ +V      G       I K   ++  +A+       + +N +I G CK G I  A 
Sbjct: 661 VLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAK 720

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            LF+ L+ K   PD+ TY +LI+G       ++AF +   M   G TP+   Y SL+   
Sbjct: 721 SLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGL 780

Query: 577 CRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           C+  K S A +L+  LQ  + IS         I+E+ ++G+   A        FKL    
Sbjct: 781 CKSGKLSRAVNLFNKLQS-KGISPNGITYNTLIDEYCKEGKTTEA--------FKLKQ-- 829

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                     + ++G ++EA+ +   ++E        +   LIHG  K G ++
Sbjct: 830 ---------KMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 873



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/557 (25%), Positives = 257/557 (46%), Gaps = 92/557 (16%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR- 145
           +E+R   + V   V+  +I+G  K+G  E+  +   +M++   +PD Y YN +++   R 
Sbjct: 348 NEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCRE 407

Query: 146 ---KQLFLL-------------------------------ALAVYYEMVKLNCLPNIVTF 171
              ++ F +                               AL +++ M+K    PN ++ 
Sbjct: 408 GSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISC 467

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S L++GL K+GKTE A+ +  E   RG+  N  T+  VI+GLC+I R  EA  L  +MK+
Sbjct: 468 STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C PD + Y  L +G+CKL ++  A  L+   E  GF P +  ++  I G F AK++ +
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHK 587

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               + +M    + P++V YG +I G  + G + +A  L  +M   G+ P+ +  +AL+ 
Sbjct: 588 VNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMS 647

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLP----------------------NTHT----FTILI 385
            F   G +D+A  +  ++   D +P                      N H+    + ++I
Sbjct: 648 CFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVII 707

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKN 444
            G+C++G + DA+ LF  +      P    +++LI G   +G +++A +L    +  G  
Sbjct: 708 FGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLT 767

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P +               +  +++   C +G + +A  +  +L   G  P+ ITYN+LI+
Sbjct: 768 PNII--------------TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 505 GFCKVGNINGALKLFKELQLKG----------------LRPDSVTYGTLINGLQRVDREE 548
            +CK G    A KL +++  +G                + P+ +TY TLI+G  +    E
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 873

Query: 549 DAFRIFGQMPQNGCTPS 565
           +  +++ +M   G  P+
Sbjct: 874 EISKLYDEMHIRGLLPT 890



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 42/290 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G+ K G+  +A   + +M      P+V+I +A+++  +++     A  V  ++
Sbjct: 606 TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL 665

Query: 160 VKLNCLPNI--------------------------VTFSLLINGLSKSGKTEVAIKMLDE 193
           V ++ +P                            V ++++I GL KSG+   A  + + 
Sbjct: 666 VNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFES 725

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           +  +  LP+ FTY+ +I G       DEA+ L   M  +G +P+ + YN+L+ G CK  +
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE----------- 302
           +  A+ L    +  G  P   +Y+ LID   +  +  EA+   +KM EE           
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845

Query: 303 -----KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
                 ++P+ + Y  +I G  ++G +++  KL  +M  RG++P  +  N
Sbjct: 846 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 161/617 (26%), Positives = 279/617 (45%), Gaps = 45/617 (7%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RS 91
           TV + +       V   FF WA   ++ R F                 LY  T D L  +
Sbjct: 96  TVVASLASESGSMVALCFFYWAVGFEKFRHF---------------MRLYLVTADSLLAN 140

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           GN+    +V   ++  + ++G   +A+     M+     P     N VL IA    L   
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  V+ EM     +P+  ++ L++ G  + GK + A + L  M QRG +P+  T T++++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+    + A   F KM D G  P+ + + +L++G CK   + +A  +L    ++G+ P
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            + +++ LIDGL +    ++A+  + K+   +  +P+V  Y  MI G  +  K+  A  L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            S M+E+G+ P+   Y  LI G C  G   +A  L   +     +PN +T+   I  +C+
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
                +A +L NK    G       +  LI   CK  ++ +A   F +M    N T F  
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM----NKTGF-- 494

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
             +   R+++      ++  +C    + ++ ++   +   G +P   TY S+I+ +CK G
Sbjct: 495 --EADMRLNN-----ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +I+ ALK F  ++  G  PDS TYG+LI+GL +    ++A +++  M   G +P      
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 607

Query: 571 SLMTWSCRRRKFSLAF--------SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           +L    C+R   + A          LW++ +R +  R   S K +      G      Q 
Sbjct: 608 TLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLV-RKLCSEKKV------GVAALFFQK 660

Query: 623 LLEMDFKLNDFQLAPYT 639
           LLE D   +   LA +T
Sbjct: 661 LLEKDSSADRVTLAAFT 677



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 208/465 (44%), Gaps = 58/465 (12%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +L  F ++ R++EA+ ++   +  G  P   + +C+++        + A   + +M    
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD   Y +M+ G    GK+++A + L+ M +RG +PD      ++   C+ GL+++A 
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA- 271

Query: 364 SLQVEIWKRDSL------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
                IW    +      PN   FT LI G+C+ G +  A ++  +M + G  P+V    
Sbjct: 272 -----IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           ALIDGLCK G  EKA  LF K+         +R       VH   S   M+  YC    +
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKL---------VRSDTYKPNVHTYTS---MIGGYCKEDKL 374

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
           ++A  +  ++ E G  P++ TY +LING CK G+   A +L   +  +G  P+  TY   
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+ L +  R  +A+ +  +    G       Y  L+   C++   + A + + +   + +
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM--NKT 492

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
           G                          E D +LN+  +A +       C+  ++KE+  +
Sbjct: 493 G-------------------------FEADMRLNNILIAAF-------CRQKKMKESERL 520

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           F ++V    I T  +   +I   CK G +DLA+  F    ++G +
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 48/354 (13%)

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +++A  +   M+  G  PS    N +++   + G +E A  +F +M +          
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR--------- 211

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                 V D +S + MV      G I +A + L  + + G +PD  T   ++   C+ G 
Sbjct: 212 ----GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +N A+  F+++   G +P+ + + +LI+GL +    + AF +  +M +NG  P+   + +
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+R     AF L+L+ +R  +                              +K N
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDT------------------------------YKPN 357

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
              +  YT  + G C++ ++  A  +FS + E        +   LI+G CK G    A +
Sbjct: 358 ---VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +       GF+      N  + SL   K ++   AY LL +  S G + D   Y
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSL--CKKSRAPEAYELLNKAFSCGLEADGVTY 466


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 294/639 (46%), Gaps = 61/639 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LI    +    + A E F KM E  CQP+ +    ++    R      AL    E 
Sbjct: 153 TFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQAL----EF 208

Query: 160 V--KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           V  K+    N V ++ L++   K    + A K+++ MT++G+LP+  T+   IS LC+  
Sbjct: 209 VDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAG 268

Query: 218 RADEAYRLFLKMKDSG----CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           +  EA R+F  M+  G      P+ V +N +L GFC+   ++EA +L+ + +K G    L
Sbjct: 269 KVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSL 328

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            SY+  + GL R  +  E  +   +M E  IEP++  Y +++ GL     + DA +L+  
Sbjct: 329 ESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDL 388

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M   G+ PDT  Y  L+ G+C  G + +A+++  E+ ++   PNT+T   L+  + + G 
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGK-NPT 446
             +A+++  KM +          N +++GLC+ GELEKA+ +  +M       +GK NP 
Sbjct: 449 KSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPV 508

Query: 447 --LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             L   +      V D  +  T++   C  G + +A K  +++      PD +TY++ + 
Sbjct: 509 AGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVL 568

Query: 505 GFCKVGNINGALKLFK-----------------------------------ELQLKGLRP 529
            FCK G I+ AL++ K                                   E++ +G+ P
Sbjct: 569 NFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC-TPSPAVYKSLMTWSCRRRKFSLAFSL 588
           D  TY  +IN L    + +DA  +  +M   G  +P+ + +K L+   C+   F +A  L
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACEL 688

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGL 645
           +   L     ++        E L  G++ +A    +  LE      +F    Y   +  L
Sbjct: 689 FDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM---YEDLIDKL 745

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           C+DG++ +A  +   L++        S + +I GL KRG
Sbjct: 746 CKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRG 784



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 173/642 (26%), Positives = 299/642 (46%), Gaps = 63/642 (9%)

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           ++Y +M++    P   TF+LLI  L +S   + A ++ D+M+++G  PNKFT  I++ G 
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  R  +A   F+  K  G + + V YN L++ FCK    DEA  L+    + G +P +
Sbjct: 197 CRAGRTKQALE-FVDGKMGG-NVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEK----IEPDVVLYGVMIRGLSEAGKVKDAMK 329
            +++  I  L RA +  EA   +R M  +      +P+VV + +M++G  + G +++A  
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L+  M++ G       YN  + G    G L + RS+  E+ +    PN +++ I++ G+C
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP--- 445
           RN M+ DA++L + M   G +P    +  L+ G C  G++ +A  +  +M   G +P   
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 446 ---TLFLRLSQGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQL 487
              TL   L + G +   +  LQ M E+                C  G + KA +++ ++
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 488 AESG----------------------NLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
              G                      N+PD+ITY +LING CKVG +  A K F E+  K
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            L PDSVTY T +    +  +   A R+   M +NGC+ +   Y SL+     + +    
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM-DFKLNDFQLAPYTIWL 642
           + L +  +R+     D    +  I    + G+ ++A   L EM D  +    ++ + I +
Sbjct: 615 YGL-MDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILI 673

Query: 643 IGLCQDGQVKEALNIFSV-LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
              C+ G  K A  +F V L  C       S   + + L   G L  A ++F  +L+   
Sbjct: 674 KAFCKSGDFKVACELFDVALSVCGHKEALYSL--MFNELLAGGKLSDAKELFEASLERSL 731

Query: 702 ILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRMKSVGYDLD 741
           + +    N++   L+    KD +   A+ LL ++   GY  D
Sbjct: 732 LSK----NFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFD 769



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 215/488 (44%), Gaps = 37/488 (7%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++ ++ G   V  + +   + G  + G   +      +M E   +P++Y YN V++   R
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             + L A  +   MV     P+ VT++ L++G    GK   A  +L+EM ++G  PN +T
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
              +++ L +  R  EA  +  KM +     D V  N ++NG C+   +++A  ++    
Sbjct: 436 CNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMW 495

Query: 266 KDGF----------------------VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            DG                       VP + +Y+ LI+GL +  + +EA   + +M  + 
Sbjct: 496 TDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKN 555

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD V Y   +    + GK+  A+++L DM   G       YN+LI G    G + +  
Sbjct: 556 LHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMY 615

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDG 422
            L  E+ +R   P+  T+  +I  +C  G   DA  L ++M +K    P+V  F  LI  
Sbjct: 616 GLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKA 675

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            CK+G+ + A  LF            + LS  G   H +A    M  +    G +  A +
Sbjct: 676 FCKSGDFKVACELFD-----------VALSVCG---HKEALYSLMFNELLAGGKLSDAKE 721

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +     E   L     Y  LI+  CK G ++ A  L ++L  KG   D  ++  +I+GL 
Sbjct: 722 LFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLS 781

Query: 543 RVDREEDA 550
           +   ++ A
Sbjct: 782 KRGNKQQA 789



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 191/431 (44%), Gaps = 59/431 (13%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D + S  V   +  +  L+ GY   G   +A     +M    C P+ Y  N +LN  ++
Sbjct: 386 MDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWK 445

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI------ 199
           +     A  +  +M + +   + VT ++++NGL ++G+ E A +++ EM   G       
Sbjct: 446 EGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKE 505

Query: 200 ----------------LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
                           +P+  TYT +I+GLC++ + +EA + F++M      PD V Y+ 
Sbjct: 506 NPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDT 565

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            +  FCK  ++  AL +L+  E++G    L +Y+ LI GL    +  E Y    +M E  
Sbjct: 566 FVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERG 625

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLG----- 357
           I PD+  Y  MI  L E GK KDA  LL +M ++G+V P+   +  LIK FC  G     
Sbjct: 626 IHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA 685

Query: 358 -----------------------------LLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                                         L  A+ L     +R  L     +  LI  +
Sbjct: 686 CELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKL 745

Query: 389 CRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           C++G +DDA  L  K+ +K  CF     F  +IDGL K G  ++A+ L   ME+      
Sbjct: 746 CKDGRLDDAHGLLQKLIDKGYCFDHSS-FIPVIDGLSKRGNKQQADELGRIMELALEDKT 804

Query: 448 FLRLSQGGNRV 458
             R  + GN +
Sbjct: 805 SDRTYRNGNSI 815


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 217/427 (50%), Gaps = 13/427 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A    GK+ +   +PD   +N ++   F +     A+ +   MV+  C P++VT++ ++N
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G+ +SG T +A+ +L +M +R +  + FTY+ +I  LC+    D A  LF +M+  G   
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             V YN+L+ G CK  + ++   LL+       VP + +++ L+D   +  +  EA   Y
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           ++M    I P+++ Y  ++ G     ++ +A  +L  M      PD   + +LIKG+C +
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +D    +   I KR  + N  T++IL+ G C++G +  A++LF +M   G  P V  +
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
             L+DGLC  G+LEKA  +F  ++  K     +  +             T++E  C  G 
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT-------------TIIEGMCKGGK 478

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +  A+ +   L   G  P+++TY  +I+G CK G+++ A  L ++++  G  P+  TY T
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 537 LINGLQR 543
           LI    R
Sbjct: 539 LIRAHLR 545



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 256/514 (49%), Gaps = 16/514 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSL 173
           + A+  F +M      P +  ++   +   R + F L L  + + ++LN +  NI T ++
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNI 118

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +IN   +  KT  A  +L ++ + G  P+  T+  +I GL    +  EA  L  +M ++G
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C PD V YN+++NG C+      AL LLR  E+      + +YS +ID L R    D A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           + +++M  + I+  VV Y  ++RGL +AGK  D   LL DM  R IVP+   +N L+  F
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              G L +A  L  E+  R   PN  T+  L+ G C    + +A  + + M +  C P +
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             F +LI G C    ++        M++ +N      +S+ G  V +  +   +V+ +C 
Sbjct: 359 VTFTSLIKGYCMVKRVDDG------MKVFRN------ISKRG-LVANAVTYSILVQGFCQ 405

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G I  A ++  ++   G LPD++TY  L++G C  G +  AL++F++LQ   +    V 
Sbjct: 406 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 465

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I G+ +  + EDA+ +F  +P  G  P+   Y  +++  C++   S A  L  +  
Sbjct: 466 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 525

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            D +  +D +  + I   L+ G++  + + + EM
Sbjct: 526 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/597 (25%), Positives = 265/597 (44%), Gaps = 96/597 (16%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A++ EM++   LP++V FS   + ++++ +  + +    ++   GI  N +T  I+I 
Sbjct: 62  AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI- 120

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                             N FC+  +   A ++L    K G+ P
Sbjct: 121 ----------------------------------NCFCRCCKTCFAYSVLGKVMKLGYEP 146

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++ LI GLF   +  EA     +M E   +PDVV Y  ++ G+  +G    A+ LL
Sbjct: 147 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 206

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M ER +  D + Y+ +I   C  G +D A SL  E+  +    +  T+  L+ G+C+ 
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G  +D   L   M      P+V  FN L+D   K G+L++AN L+ +M   G +P +   
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII-- 324

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +  T+++ YC    + +A  +L  +  +   PDI+T+ SLI G+C V 
Sbjct: 325 ------------TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 372

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++  +K+F+ +  +GL  ++VTY  L+ G  +  + + A  +F +M  +G  P    Y 
Sbjct: 373 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 432

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C   K   A  ++                   E LQK ++              
Sbjct: 433 ILLDGLCDNGKLEKALEIF-------------------EDLQKSKM-------------- 459

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLD 687
            D  +  YT  + G+C+ G+V++A N+F  L  CK +   P+ +    +I GLCK+G L 
Sbjct: 460 -DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGV--KPNVMTYTVMISGLCKKGSLS 515

Query: 688 LAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +     ++G    P  C Y  L+R+ L  +D     +  L+  MKS G+  DA
Sbjct: 516 EANILLRKMEEDGNA--PNDCTYNTLIRAHL--RDGDLTASAKLIEEMKSCGFSADA 568



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 188/372 (50%), Gaps = 35/372 (9%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM---- 159
           +++G  + GD   AL+   KM+E + + DV+ Y+ +++   R      A++++ EM    
Sbjct: 189 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 248

Query: 160 -------------------------------VKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
                                          V    +PN++TF++L++   K GK + A 
Sbjct: 249 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 308

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++  EM  RGI PN  TY  ++ G C  NR  EA  +   M  + CSPD V + +L+ G+
Sbjct: 309 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 368

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C ++RVD+ + + R+  K G V    +YS L+ G  ++ +   A   +++M    + PDV
Sbjct: 369 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 428

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + YG+++ GL + GK++ A+++  D+++  +      Y  +I+G C  G ++ A +L   
Sbjct: 429 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 488

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   PN  T+T++I G+C+ G + +A  L  KME+ G  P+   +N LI    + G+
Sbjct: 489 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 548

Query: 429 LEKANLLFYKME 440
           L  +  L  +M+
Sbjct: 549 LTASAKLIEEMK 560



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 238/538 (44%), Gaps = 56/538 (10%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SG+  I + D+A  LF +M  S   P  V ++   +   + ++ +  L   +  E +G  
Sbjct: 52  SGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 110

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + + + +I+   R  +   AY+   K+ +   EPD   +  +I+GL   GKV +A+ L
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 170

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M E G  PD   YN+++ G C  G    A  L  ++ +R+   +  T++ +I  +CR
Sbjct: 171 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 230

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL 447
           +G +D A  LF +ME  G   SV  +N+L+ GLCKAG+     LL   M   EI  N   
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 290

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F                  +++ +   G + +A ++  ++   G  P+IITYN+L++G+C
Sbjct: 291 F----------------NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 334

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
               ++ A  +   +      PD VT+ +LI G   V R +D  ++F  + + G   +  
Sbjct: 335 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 394

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  L+   C+  K  LA                      EE  Q    E    G+L   
Sbjct: 395 TYSILVQGFCQSGKIKLA----------------------EELFQ----EMVSHGVLP-- 426

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  Y I L GLC +G++++AL IF  L + K  +       +I G+CK G ++
Sbjct: 427 ------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            A ++F      G  ++P V  Y +      K      A  LL +M+  G   + C Y
Sbjct: 481 DAWNLFCSLPCKG--VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 165/360 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L +    D       E+ +  +      +  L+ G  K G           M  
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  P+V  +N +L++  ++     A  +Y EM+     PNI+T++ L++G     +   
Sbjct: 282 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  MLD M +    P+  T+T +I G C + R D+  ++F  +   G   + V Y+ L+ 
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+  ++  A  L +     G +P + +Y  L+DGL    + ++A   +  + + K++ 
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V+Y  +I G+ + GKV+DA  L   +  +G+ P+   Y  +I G C  G L +A  L 
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +  + PN  T+  LI    R+G +  + KL  +M+  G          +ID L  A
Sbjct: 522 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 154/373 (41%), Gaps = 46/373 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G+ + G  + A E F +M      PDV  Y  +L+          AL ++ ++
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K      IV ++ +I G+ K GK E A  +   +  +G+ PN  TYT++ISGLC+    
Sbjct: 455 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 514

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L  KM++ G +P+   YN L+    +   +  +  L+   +  GF     S   +
Sbjct: 515 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 574

Query: 280 IDGLFRA-KRYDEAYAWYR-------------------------KMFE-EKIEPDVVLYG 312
           ID L  A KR    Y   +                         KMF    I   + +  
Sbjct: 575 IDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNT 634

Query: 313 VMIRGLSEAGKVKDAMKL-----LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +  RG++ A   +D  KL     L   + R +       N L+      GL D    L V
Sbjct: 635 IEARGMNSAELNRDLRKLRRSSVLKKFKNRDV--RVLVTNELLT----WGLEDAECDLMV 688

Query: 368 EIWKRDSLPNTHTFTILICG-MCRNG---MVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           ++     LP          G M R G    V  A++L  +M + G  P+   +++LIDG 
Sbjct: 689 DL----ELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 424 CKAGELEKANLLF 436
           CK   L++AN + 
Sbjct: 745 CKENRLDEANQML 757



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 49/313 (15%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I G  K G  E A   F  +     +P+V  Y  +++   +K     A  +  +M
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    PN  T++ LI    + G    + K+++EM   G   +  +  +VI  L    + 
Sbjct: 525 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK- 583

Query: 220 DEAYRLFLK---MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
               RL L+    K S    D +     L+G  K+R    +L  ++ F  +     L   
Sbjct: 584 ----RLTLRYCLSKGSKSRQDLLE----LSGSEKIRL--SSLTFVKMFPCNTITTSLNVN 633

Query: 277 SCLIDGLFRA---------------KRY----------DEAYAWYRK------MFEEKIE 305
           +    G+  A               K++          +E   W  +      M + ++ 
Sbjct: 634 TIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELP 693

Query: 306 PDVVLYGVMIRGLSEAGK---VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            D V Y      +   G+   V  A +L  +M +RGI P+T  Y++LI GFC    LD+A
Sbjct: 694 TDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEA 753

Query: 363 RS-LQVEIWKRDS 374
              L + + K DS
Sbjct: 754 NQMLDLMVTKGDS 766



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 18/150 (12%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAI---KMLDEMTQRGILPNKFTYTIVISGLCQ 215
           MV L    + V ++     + + G+    +   ++  EM QRGI PN  TY+ +I G C+
Sbjct: 687 MVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCK 746

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            NR DEA ++   M   G S   + Y  LL G  + +R        +  E +G+      
Sbjct: 747 ENRLDEANQMLDLMVTKGDSD--IRY--LLAGLMRKKR--------KGSETEGWENLPDD 794

Query: 276 YSCLI---DGLFRAKRYDEAYAWYRKMFEE 302
            SC        FR+    E YA  +K  +E
Sbjct: 795 LSCSTASRSSNFRSHFSLEGYARLKKRCKE 824


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 174/677 (25%), Positives = 308/677 (45%), Gaps = 46/677 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  L+K   F L     DE+      +   V+   I  Y ++ + + A     +M+ 
Sbjct: 164 SQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMES 223

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +     YN ++    R    L A+ V   MV+   + + VT+  L+ G  ++ + E+
Sbjct: 224 KGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEM 283

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++M D+M     +P+  + + ++ GL +    D+A+RL   + + G  P+  A NAL++
Sbjct: 284 ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK RR  EA  L R     G  P   +Y+ LI  L +    D+A   + +M E+ I  
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V  Y  +I G  +      A  LL++M E+G+ P    Y+ LI G C  G L  A  L 
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +     N +TFT LI G C++G +D+A +LF+KM  +   P+   FN +I+G C+ 
Sbjct: 464 REMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRV 523

Query: 427 GELEKANLLFYKM-EIGKNPTLF--------LRLSQGGNR-------------VHDKASL 464
           G + KA  L+ +M + G  P  +        L L+ G  +             V +  SL
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSL 583

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++  +C  G + + Y I  ++   G   D+I++  ++    K+ +      LF+E++ 
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG++PD+V +  +I+   + +    A   + +M  +GC+P+   Y  L+   C+    S 
Sbjct: 644 KGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSS 703

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENA-------IQGLLEMDFKLNDFQLA 636
           A  L  + L      +  +     +FL  +GE+E A       ++G L      N     
Sbjct: 704 AQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTL--- 760

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
                + G C+ GQ++ A+++     E       P C+    +I+ LCK G ++ A  ++
Sbjct: 761 -----IKGFCKAGQIQGAIDLMQNNTESGFF---PDCISYSTIINELCKVGDINKAFQLW 812

Query: 694 LYTLKNGFILRPRVCNY 710
              L  G  L+P +  Y
Sbjct: 813 NEMLYKG--LKPDIVAY 827



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 154/603 (25%), Positives = 256/603 (42%), Gaps = 96/603 (15%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SV S  F  ++ G  K G  +KA      + E    P+++  NA+++   + + F  A  
Sbjct: 299 SVASCSF--MVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAER 356

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++  M      PN VT+++LI+ L K G  + A+ M D M ++GI    + Y  +I+G C
Sbjct: 357 LFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYC 416

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           Q +   +A  L  +M + G +P   +Y+ L+ G C+   +  A+ L R   ++G    + 
Sbjct: 417 QHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVY 476

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ LI G  +    DEA   + KM +  + P+ V + VMI G    G V+ A +L   M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536

Query: 335 RERGIVPDTYCYNALIK-----------------------------------GFCDLGLL 359
            +RG+ PD Y Y +LI                                    GFC  G L
Sbjct: 537 VDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRL 596

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCR--------------------------NGM 393
            +   +  E+  R    +  +FT+++    +                            M
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656

Query: 394 VD---------DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           +D          A   ++KM   GC P+V  +  LI+ LCK+G L  A +L  +M +G+ 
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716

Query: 445 -PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P  F              +    ++     G + KA K+L      G L + +T+N+LI
Sbjct: 717 LPNSF--------------TYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLI 761

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            GFCK G I GA+ L +     G  PD ++Y T+IN L +V     AF+++ +M   G  
Sbjct: 762 KGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLK 821

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW-----LQYLRDISGRDDESMKSIEEFLQK---GE 615
           P    Y  L+ W     +F     ++     L+Y  D       S + + E +Q+   GE
Sbjct: 822 PDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDTPVNHKGSGRKVIENMQQIYAGE 881

Query: 616 VEN 618
           + N
Sbjct: 882 LAN 884



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 233/493 (47%), Gaps = 20/493 (4%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F   A R    +  + + +I  L K    D      D +R   + V    +  LI+GY
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            +  +  +A     +M E    P    Y+ ++    RK     A+ ++ EM +     N+
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            TF+ LI+G  K G  + A ++ D+M    ++PN+ T+ ++I G C++    +A++L+ +
Sbjct: 476 YTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQ 535

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M D G +PD   Y +L++  C      +A   +   E +  V    S + L+ G  +  R
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGR 595

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK---LLSDMRERGIVPDTYC 345
             E Y  + +M    ++ D++ + V++     A K+ D  K   L  +M+E+G+ PD   
Sbjct: 596 LTETYHIWDEMRARGVKLDLISFTVIVYA---ALKLHDGEKISVLFREMKEKGVKPDNVF 652

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +  +I        + QA +   ++      PN  T+T+LI  +C++G +  AQ L  +M 
Sbjct: 653 HTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEML 712

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
                P+   +N  +D L   GELEKA +L   +  G               + +  +  
Sbjct: 713 VGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGC--------------LANTVTFN 758

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T+++ +C AG I  A  ++    ESG  PD I+Y+++IN  CKVG+IN A +L+ E+  K
Sbjct: 759 TLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYK 818

Query: 526 GLRPDSVTYGTLI 538
           GL+PD V Y  LI
Sbjct: 819 GLKPDIVAYNILI 831



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 196/409 (47%), Gaps = 15/409 (3%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T S ++  L K  +  +A  + DEM Q     +++ YT  I   C+I   D A  L  +M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +  G     V YN L+ G C+  RV EA+ +  S  + G V    +Y  L+ G  R +  
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           + A      M      P V     M+ GL + G +  A +L   + E G+VP+ +  NAL
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I   C      +A  L   +  R   PN  T+ ILI  +C+ GM+DDA  +F++M + G 
Sbjct: 342 IDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             +V  +N+LI+G C+     +A  L  +M E G  P+               AS   ++
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPS--------------AASYSPLI 447

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G +  A ++  ++A +G   ++ T+ +LI+GFCK GN++ A +LF ++    + 
Sbjct: 448 AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           P+ VT+  +I G  RV     AF+++ QM   G TP    Y+SL++  C
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC 556



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 207/466 (44%), Gaps = 22/466 (4%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI   ++T + ++  L +I +   A  LF +M       D   Y A +  +C++R +D A
Sbjct: 155 GIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGA 214

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             LL   E  G       Y+ L+ GL R  R  EA      M E  I  D V Y  ++ G
Sbjct: 215 RGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYG 274

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +++ A+++  DM     VP     + ++ G    G +D+A  L   + +   +PN
Sbjct: 275 FCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPN 334

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
                 LI  +C++    +A++LF  M   G  P+   +  LI  LCK G ++ A  +F 
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFD 394

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M E G   T++                 +++  YC     H+A  +L ++ E G  P  
Sbjct: 395 RMREKGIRVTVY--------------PYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSA 440

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            +Y+ LI G C+ G++  A++L +E+   G+  +  T+ TLI+G  +    ++A R+F +
Sbjct: 441 ASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDK 500

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF----LQ 612
           M  +   P+   +  ++   CR      AF L+ Q +      D+ + +S+       L 
Sbjct: 501 MIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLG 560

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
             + +  +  L      LN F L   T  + G C++G++ E  +I+
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSL---TTLMYGFCKEGRLTETYHIW 603



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 231/507 (45%), Gaps = 36/507 (7%)

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + + +LRR  +A  +LR     G   +  + S ++  L + +++  A   + +M + K  
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            D  +Y   IR   E   +  A  LL+ M  +G+      YN L+ G C    + +A  +
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           +  + +R  + +  T+  L+ G CR   ++ A ++ + M      PSV   + ++DGL K
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 426 AGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G ++KA  L  +  E+G  P LF              +   ++++ C      +A ++ 
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLF--------------ACNALIDKLCKDRRFREAERLF 358

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             +A  G  P+ +TY  LI+  CK G ++ AL +F  ++ KG+R     Y +LING  + 
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDES 603
           D    A  +  +M + G  PS A Y  L+   CR+   + A  L  +  R+ +SG     
Sbjct: 419 DNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTF 478

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFS 659
              I  F + G ++ A + L +   K+ D  + P    + + + G C+ G V++A  ++ 
Sbjct: 479 TTLISGFCKDGNMDEAAR-LFD---KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDL-AMDV--FLYTLKNGFILRPRVCNYLLRSLL 716
            +V+        +   LI  LC    L L AM    F+  L+N  ++   + ++ L +L+
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLC----LTLGAMKAKEFVDDLENNCVV---LNSFSLTTLM 587

Query: 717 --FSKDNKKVHAYHLLCRMKSVGYDLD 741
             F K+ +    YH+   M++ G  LD
Sbjct: 588 YGFCKEGRLTETYHIWDEMRARGVKLD 614


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 263/560 (46%), Gaps = 30/560 (5%)

Query: 17  PIEPALEPLLP------FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAV 69
           P+  A  PL P       L ++ V   + +  N     + F +       +    +   +
Sbjct: 20  PLVLATRPLNPPPSSASLLHESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVM 79

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           I  L + +  D     L +++   +    D F  +++ Y   G  ++AL+ F ++KEF C
Sbjct: 80  IEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGC 139

Query: 130 QPDVYIYNAVLN--IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           +P V IYN +L+  +      F +  AVY  M      PN+ T+++L+  L K+GK + A
Sbjct: 140 KPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGA 199

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
            K+L EM++RG +P+  +YT V++ +C+  R +EA  +  +    G        NAL+ G
Sbjct: 200 CKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVS---VCNALICG 256

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+  RV E   L+     +G  P + SYS +I  L      + A A   KM      P+
Sbjct: 257 LCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPN 316

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V  +  +++G    G+V + + L   M   G+ P+   YN L+ G C  G L +A  +  
Sbjct: 317 VHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCG 376

Query: 368 EIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
            + ++D    PN  T++ L+ G  + G +  A +++NKM   G  P+V ++ +++D LCK
Sbjct: 377 RM-EKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCK 435

Query: 426 AGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
               ++A  L   M   G  PT+               +  T ++  C  G +  A +++
Sbjct: 436 NSMFDQAYRLIDNMATDGCPPTV--------------VTFNTFIKGLCCGGRVLWAMRVV 481

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            Q+   G LPD  TYN L++G   V  +  A +L +EL+ + +  + VTY T++ G    
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 545 DREEDAFRIFGQMPQNGCTP 564
            +EE   ++ G+M  NG  P
Sbjct: 542 GKEEWVLQVLGRMLVNGVKP 561



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 262/542 (48%), Gaps = 31/542 (5%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL-SKS 181
           K++   C  D +I   VLN      L   AL ++Y + +  C P +  ++ L++ L  +S
Sbjct: 100 KIERIPCSQDSFI--CVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGES 157

Query: 182 G-KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           G K  +   + + M   G+ PN FTY +++  LC+  + D A +L ++M   GC PD V+
Sbjct: 158 GNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVS 217

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y  ++   C+  RV+EA  + R F  +G V    +  C   GL R  R  E +    +M 
Sbjct: 218 YTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALIC---GLCREGRVGEVFGLMDEMV 274

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              ++P+VV Y  +I  LS+ G+V+ A+ +L  M  RG  P+ + +++L+KG+   G + 
Sbjct: 275 GNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVG 334

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK-AGCFPSVGMFNAL 419
           +   L   +      PN   +  L+ G+C +G + +A  +  +MEK   C P+V  ++ L
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTL 394

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           + G  KAG+L+ A+ ++ KM   G  P + +  S              MV+  C   +  
Sbjct: 395 VHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTS--------------MVDVLCKNSMFD 440

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +AY+++  +A  G  P ++T+N+ I G C  G +  A+++  ++Q  G  PD+ TY  L+
Sbjct: 441 QAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELL 500

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           +GL  V+  ++A  +  ++ +     +   Y ++M       K      +  + L +   
Sbjct: 501 DGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVK 560

Query: 599 RDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKE 653
            D  ++   I  + + G+V  AIQ L   D      +L P    +T  L G+C    ++E
Sbjct: 561 PDAITVNVVIYAYSKLGKVRTAIQFL---DRITAGKELCPDIIAHTSLLWGICNSLGIEE 617

Query: 654 AL 655
           A+
Sbjct: 618 AI 619



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 174/366 (47%), Gaps = 2/366 (0%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  S S+VIS L      +L    L ++           F  L+ GY+  G   + +  +
Sbjct: 281 NVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLW 340

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSK 180
             M     +P+V +YN +LN          A+ V   M K   C PN+ T+S L++G  K
Sbjct: 341 RVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVK 400

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           +G  + A ++ ++M   G+ PN   YT ++  LC+ +  D+AYRL   M   GC P  V 
Sbjct: 401 AGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVT 460

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           +N  + G C   RV  A+ ++   ++ G +P   +Y+ L+DGLF      EA    R++ 
Sbjct: 461 FNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELE 520

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           E K+E ++V Y  ++ G S  GK +  +++L  M   G+ PD    N +I  +  LG + 
Sbjct: 521 ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVR 580

Query: 361 QARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            A      I     L P+    T L+ G+C +  +++A    NKM   G FP++  ++ L
Sbjct: 581 TAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVL 640

Query: 420 IDGLCK 425
           + G  K
Sbjct: 641 VRGFFK 646



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 198/442 (44%), Gaps = 22/442 (4%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF---DCQPDVYIYNAVLNIAFRK 146
           R G   VVS V   LI G  + G   +  E FG M E       P+V  Y++V++     
Sbjct: 240 RFGAEGVVS-VCNALICGLCREG---RVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDV 295

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
               LALAV  +M++  C PN+ TFS L+ G    G+    + +   M   G+ PN   Y
Sbjct: 296 GEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVY 355

Query: 207 TIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
             +++GLC      EA  +  +M KD  C P+   Y+ L++GF K   +  A  +     
Sbjct: 356 NTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMV 415

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P +  Y+ ++D L +   +D+AY     M  +   P VV +   I+GL   G+V 
Sbjct: 416 NCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVL 475

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            AM+++  M+  G +PDT  YN L+ G   +  L +A  L  E+ +R    N  T+  ++
Sbjct: 476 WAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVM 535

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G   +G  +   ++  +M   G  P     N +I    K G++  A             
Sbjct: 536 YGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTA------------- 582

Query: 446 TLFL-RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             FL R++ G     D  +  +++   C +  I +A   L ++   G  P+I T++ L+ 
Sbjct: 583 IQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVR 642

Query: 505 GFCKVGNINGALKLFKELQLKG 526
           GF K     G +++  ++  KG
Sbjct: 643 GFFKKLGHMGPIRILDDILGKG 664


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 275/630 (43%), Gaps = 59/630 (9%)

Query: 44  PQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           P+V  RFF W   +   + S     A++ +L+  +     +  ++ + S  +  V DV  
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDV-- 156

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+G+         L  F KM      PDV   N +L +   + L   A  VY  M + 
Sbjct: 157 -LIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P +VT++ +++   K G+ + A+++L EM +RG  PN  TY ++++GL +    ++A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M +SG +     YN L+NGFC+     EA  L+         P L +Y+ L+ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +       +  M + K  PD+V +  ++ G    G + +A  L  +++ R +VP 
Sbjct: 330 LCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPT 389

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C  G LD A  L+ E+  +   P+  T+TIL+ G  + G V  A+  FN
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P    +N  I G  K  +   A  +  +M     P              D  
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP-------------DVI 496

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +    V   C  G   +A  +L  +   G +PD +TY S+INGF K G++  A ++F E+
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG+ P  VTY  LI+        + AF  F +M +     +   Y +++   C  R  
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR-- 614

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                           R DE+ K  +E  +KG + N                   YTI +
Sbjct: 615 ----------------RMDEAYKYFDEMEEKGILPNKFS----------------YTILI 642

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              C  G  +EAL ++  +++ K  + P S
Sbjct: 643 NESCNMGYWEEALRLYREMLDRK--IQPDS 670



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L V+ +M++   LP++   + ++  L        A  +   M Q GI P   TY  ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C+  R D+A  L  +M++ GC P+ V YN L+NG  K   +++A  L+      G    
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y+ LI+G  +   + EA+    +M   +  P +  Y  ++ GL +  +V       S
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           DM +    PD   +N+L+ G+C  G + +A  L  E+  RD +P   T+  LI G+C  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            +D A +L  +M   G FP +  +  L++G  K G +  A   F +M   G  P  F   
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 452 SQ--GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           ++  G  ++ D +   +M E+   AG                  PD+ITYN  ++  C+ 
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFP----------------PDVITYNVFVHALCQQ 508

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN   A  L + +   GL PD VTY ++ING  +      A  +F +M   G  PS   Y
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+     ++   LAF  +                   + L+K    N I         
Sbjct: 569 TVLIHAHAAKQMLDLAFMYF------------------SKMLEKSVPANVIT-------- 602

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                   Y   + GLC   ++ EA   F  + E   +    S   LI+  C  GY + A
Sbjct: 603 --------YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEA 654

Query: 690 MDVF 693
           + ++
Sbjct: 655 LRLY 658



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 199/446 (44%), Gaps = 51/446 (11%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++G +P + + + ++  L       +A   Y  M +  I+P VV Y  M+    + G+V 
Sbjct: 173 RNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVD 232

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++LLS+M+ERG  P+   YN L+ G    G L+QA+ L  E+       + +T+  LI
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLI 292

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-N 444
            G C+ G+  +A  L  +M     FP++  +N L+ GLCK  ++    L F  M   K  
Sbjct: 293 NGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFT 352

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  S  +++  YC  G I +A+ +  +L     +P +ITYN+LI+
Sbjct: 353 P--------------DIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G C  G ++ AL+L KE+  +GL PD  TY  L+NG  ++     A   F +M   G  P
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y + +    +    S+AFS+                   EE L  G   + I    
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQ------------------EEMLAAGFPPDVIT--- 497

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        Y +++  LCQ G  +EA ++   +V    I    +   +I+G  K G
Sbjct: 498 -------------YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
           +L  A +VF   L  G  + P V  Y
Sbjct: 545 HLRKAREVFNEMLSKG--VAPSVVTY 568



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DEL+  ++      +  LI G    G  + AL    +M +    PD++ Y  ++N  F+
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                +A   + EM+     P+   ++  I G  K   T VA  M +EM   G  P+  T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y + +  LCQ    +EA  L   M   G  PD V Y +++NGF K   + +A  +     
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P + +Y+ LI      +  D A+ ++ KM E+ +  +V+ Y  +I GL    ++ 
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A K   +M E+GI+P+ + Y  LI   C++G  ++A  L  E+  R   P++ T ++ +
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 386 CGMCRNGMVDDAQ 398
             + R+  V   Q
Sbjct: 678 KNLHRDYQVHAVQ 690


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 275/630 (43%), Gaps = 59/630 (9%)

Query: 44  PQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           P+V  RFF W   +   + S     A++ +L+  +     +  ++ + S  +  V DV  
Sbjct: 99  PRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDV-- 156

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+G+         L  F KM      PDV   N +L +   + L   A  VY  M + 
Sbjct: 157 -LIAGHVX------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P +VT++ +++   K G+ + A+++L EM +RG  PN  TY ++++GL +    ++A
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQA 269

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M +SG +     YN L+NGFC+     EA  L+         P L +Y+ L+ G
Sbjct: 270 KGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYG 329

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +       +  M + K  PD+V +  ++ G    G + +A  L  +++ R +VP 
Sbjct: 330 LCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPT 389

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C  G LD A  L+ E+  +   P+  T+TIL+ G  + G V  A+  FN
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P    +N  I G  K  +   A  +  +M     P              D  
Sbjct: 450 EMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPP-------------DVI 496

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +    V   C  G   +A  +L  +   G +PD +TY S+INGF K G++  A ++F E+
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEM 556

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG+ P  VTY  LI+        + AF  F +M +     +   Y +++   C  R  
Sbjct: 557 LSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTR-- 614

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                           R DE+ K  +E  +KG + N                   YTI +
Sbjct: 615 ----------------RMDEAYKYFDEMEEKGILPNKFS----------------YTILI 642

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              C  G  +EAL ++  +++ K  + P S
Sbjct: 643 NESCNMGYWEEALRLYREMLDRK--IQPDS 670



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 231/544 (42%), Gaps = 53/544 (9%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L V+ +M++   LP++   + ++  L        A  +   M Q GI P   TY  ++  
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C+  R D+A  L  +M++ GC P+ V YN L+NG  K   +++A  L+      G    
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y+ LI+G  +   + EA+    +M   +  P +  Y  ++ GL +  +V       S
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           DM +    PD   +N+L+ G+C  G + +A  L  E+  RD +P   T+  LI G+C  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            +D A +L  +M   G FP +  +  L++G  K G +  A   F +M   G  P  F   
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 452 SQ--GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           ++  G  ++ D +   +M E+   AG                  PD+ITYN  ++  C+ 
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFP----------------PDVITYNVFVHALCQQ 508

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN   A  L + +   GL PD VTY ++ING  +      A  +F +M   G  PS   Y
Sbjct: 509 GNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTY 568

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+     ++   LAF  +                   + L+K    N I         
Sbjct: 569 TVLIHAHAAKQMLDLAFMYF------------------SKMLEKSVPANVIT-------- 602

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                   Y   + GLC   ++ EA   F  + E   +    S   LI+  C  GY + A
Sbjct: 603 --------YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEA 654

Query: 690 MDVF 693
           + ++
Sbjct: 655 LRLY 658



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 199/446 (44%), Gaps = 51/446 (11%)

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++G +P + + + ++  L       +A   Y  M +  I+P VV Y  M+    + G+V 
Sbjct: 173 RNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVD 232

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++LLS+M+ERG  P+   YN L+ G    G L+QA+ L  E+       + +T+  LI
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLI 292

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-N 444
            G C+ G+  +A  L  +M     FP++  +N L+ GLCK  ++    L F  M   K  
Sbjct: 293 NGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFT 352

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  S  +++  YC  G I +A+ +  +L     +P +ITYN+LI+
Sbjct: 353 P--------------DIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G C  G ++ AL+L KE+  +GL PD  TY  L+NG  ++     A   F +M   G  P
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y + +    +    S+AFS+                   EE L  G   + I    
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQ------------------EEMLAAGFPPDVIT--- 497

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                        Y +++  LCQ G  +EA ++   +V    I    +   +I+G  K G
Sbjct: 498 -------------YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
           +L  A +VF   L  G  + P V  Y
Sbjct: 545 HLRKAREVFNEMLSKG--VAPSVVTY 568



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 146/313 (46%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DEL+  ++      +  LI G    G  + AL    +M +    PD++ Y  ++N  F+
Sbjct: 378 FDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFK 437

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                +A   + EM+     P+   ++  I G  K   T VA  M +EM   G  P+  T
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y + +  LCQ    +EA  L   M   G  PD V Y +++NGF K   + +A  +     
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P + +Y+ LI      +  D A+ ++ KM E+ +  +V+ Y  +I GL    ++ 
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A K   +M E+GI+P+ + Y  LI   C++G  ++A  L  E+  R   P++ T ++ +
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 386 CGMCRNGMVDDAQ 398
             + R+  V   Q
Sbjct: 678 KNLHRDYQVHAVQ 690


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 268/569 (47%), Gaps = 38/569 (6%)

Query: 5   LNEVLTILDTVTPIEPALEPLLP---FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-- 59
           + ++L +L T    E  L+        L+      V+ + ++ ++G +FF W ++ +   
Sbjct: 31  VKDILEVLHTHNQWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSG 90

Query: 60  -LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            +  FA  S+++ +L +   F      L+ +R   +S   +   ++I  Y   G  EKAL
Sbjct: 91  PINGFAY-SSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKAL 149

Query: 119 E-SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS-LLIN 176
           E  +  +K +   PDV   N++LN+                +VKL  +     F+ +++ 
Sbjct: 150 ELYYFVLKTYTYFPDVIACNSLLNM----------------LVKLGRIEIARKFTCIMVK 193

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K GK E   K++++   +G +PN   Y  +I G C+    + A  LF+++K  G  P
Sbjct: 194 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 253

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
               Y A++NGFCK         LL      G    +  Y+ +ID  ++     +A    
Sbjct: 254 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 313

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M E   +PD+V Y  +I G    GKV +A +LL     +G++P+ + Y  LI  +C  
Sbjct: 314 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 373

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G  D+A +  +E+ +R   P+  T+  L+ G+   G VD A  +  KM + G FP  G++
Sbjct: 374 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 433

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N L+ GLCK  +L  A LL  +M           L Q  + + D     T+V+ +   G 
Sbjct: 434 NILMSGLCKKFKLPAAKLLLAEM-----------LDQ--SVLPDAFVYATLVDGFIRNGN 480

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A K+     E G  P I+ YN++I G+CK G +  A+     ++ + L PD  TY T
Sbjct: 481 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYST 540

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +I+G  +    + A ++F +M +  C P+
Sbjct: 541 VIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 6/325 (1%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + +  +I+G+ K GD +       +M       +V +YN +++  ++    + A+     
Sbjct: 256 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 315

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M++  C P+IVT++ LI+G  + GK   A ++L++   +G++PNKF+YT +I   C+   
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 375

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            D A    ++M + G  PD V Y AL++G      VD AL +     + G  P  G Y+ 
Sbjct: 376 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 435

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+ GL +  +   A     +M ++ + PD  +Y  ++ G    G + +A KL     E+G
Sbjct: 436 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 495

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P    YNA+IKG+C  G++  A +    + KR   P+  T++ +I G  +   +D AQ
Sbjct: 496 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 555

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGL 423
           K+F +M K  C P+V      +DGL
Sbjct: 556 KMFREMVKMKCKPNV------MDGL 574



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 180/434 (41%), Gaps = 36/434 (8%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N   +S L+  L++S        +L+ M    + P +   +IVI         ++A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 227 -LKMKDSGCSPDFVAYNALLN--------------------GFCKLRRVDEALALLRSFE 265
              +K     PD +A N+LLN                    G CK  +++E   L+    
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRW 212

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G +P +  Y+ LIDG  +    + A   + ++  +   P V  YG +I G  + G  K
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 272

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
              +LL +M  RG+  +   YN +I      G + +A      + +    P+  T+  LI
Sbjct: 273 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 332

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKN 444
            G CR+G V +A +L  +    G  P+   +  LI   CK G  ++A N L    E G  
Sbjct: 333 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 392

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  +   +V     AG +  A  I  ++ E G  PD   YN L++
Sbjct: 393 P--------------DLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMS 438

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G CK   +  A  L  E+  + + PD+  Y TL++G  R    ++A ++F    + G  P
Sbjct: 439 GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNP 498

Query: 565 SPAVYKSLMTWSCR 578
               Y +++   C+
Sbjct: 499 GIVGYNAMIKGYCK 512



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 202/444 (45%), Gaps = 44/444 (9%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS-D 333
           +YS L+  L R++ + E       M  E++ P      ++I+  S++G V+ A++L    
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           ++     PD    N+L+     LG ++ AR                   I++ G+C+ G 
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKFT---------------CIMVKGLCKEGK 200

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLS 452
           +++ +KL       GC P++  +N LIDG CK G++E AN LF ++++ G  PT+     
Sbjct: 201 LEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV----- 255

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   ++  +C  G      ++LM++   G   ++  YN++I+   K G+I
Sbjct: 256 ---------ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHI 306

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A++  + +   G +PD VTY TLI+G  R  +  +A ++  Q    G  P+   Y  L
Sbjct: 307 VKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPL 366

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKL 630
           +   C++  +  A S WL  + +   + D       +   +  GEV+ A    L +  K+
Sbjct: 367 IHAYCKQGGYDRA-SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA----LTIREKM 421

Query: 631 NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            +  + P    Y I + GLC+  ++  A  + + +++   +        L+ G  + G L
Sbjct: 422 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 481

Query: 687 DLAMDVFLYTLKNGFILRPRVCNY 710
           D A  +F  T++ G  + P +  Y
Sbjct: 482 DEARKLFELTIEKG--MNPGIVGY 503



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 70/330 (21%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            FI    +  L +  +  A+I+   K   F    + L E+ S  ++V   V+  +I   Y
Sbjct: 242 LFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARY 301

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK-------QLFLLALAV------- 155
           K G   KA+E+   M E  C+PD+  YN +++ + R        QL   AL         
Sbjct: 302 KHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF 361

Query: 156 ---------------------YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
                                  EM +    P++VT+  L++GL  +G+ +VA+ + ++M
Sbjct: 362 SYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKM 421

Query: 195 TQRGILPNKFTYTIVISGLCQI-----------------------------------NRA 219
            +RG+ P+   Y I++SGLC+                                       
Sbjct: 422 LERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNL 481

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA +LF    + G +P  V YNA++ G+CK   + +A+A +   +K    P   +YS +
Sbjct: 482 DEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTV 541

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           IDG  +    D A   +R+M + K +P+V+
Sbjct: 542 IDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 198/386 (51%), Gaps = 16/386 (4%)

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             Y  +++G C   + D A RL  +M      PD   YN L+ G C   R   ALA+L  
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             +   VP + +Y+ L++   +   Y +A     +M ++   PD+V Y V++ G+ + G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V DA++ L ++   G  P+T  YN ++KG C     + A  L  E+ ++   PN  TF +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI  +CR G+V+ A ++  ++ K GC P+   +N L+   CK  +++KA           
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA----------- 226

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
               FL L        D  S  T++   C +G +  A ++L QL + G  P +I+YN++I
Sbjct: 227 --MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 284

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G  K G    AL+L  E+  KGL+PD +TY T+  GL R DR EDA R FG++   G  
Sbjct: 285 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIR 344

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW 589
           P+  +Y +++   C+RR+   A  L+
Sbjct: 345 PNTVLYNAIILGLCKRRETHSAIDLF 370



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 225/446 (50%), Gaps = 58/446 (13%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  T++ LI GL   G+T  A+ +LDEM +R  +P+  TYTI++   C+ +   +A +L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M+D GC+PD V YN ++NG C+  RVD+A+  L++    G  P   SY+ ++ GL  
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R+++A     +M ++   P+VV + ++I  L   G V+ A+++L  + + G  P++  
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+  FC    +D+A +    +  R   P+  ++  L+  +CR+G VD A +L ++++
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             GC P +  +N +IDGL KAG+ ++A                                 
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEA--------------------------------- 296

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
                           ++L ++   G  PDIITY+++  G C+   I  A++ F ++Q  
Sbjct: 297 ---------------LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+RP++V Y  +I GL +      A  +F  M  NGC P+ + Y  L+          LA
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE--------GLA 393

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFL 611
           +   ++  RD+   D+   ++ EE L
Sbjct: 394 YEGLIKEARDL--LDELCSRAGEEIL 417



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 13/388 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G    G    AL    +M    C PDV  Y  +L    ++  +  A+ +  EM
Sbjct: 34  TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+IVT+++++NG+ + G+ + AI+ L  +   G  PN  +Y IV+ GLC   R 
Sbjct: 94  RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERW 153

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M   GC P+ V +N L++  C+   V+ AL +L    K G  P   SY+ L
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +    + K+ D+A A+   M      PD+V Y  ++  L  +G+V  A++LL  ++++G 
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN +I G    G   +A  L  E+  +   P+  T++ +  G+CR   ++DA +
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
            F K++  G  P+  ++NA+I GLCK  E   A  LF  M              G   + 
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-------------IGNGCMP 380

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++++   ++E     GLI +A  +L +L
Sbjct: 381 NESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 184/354 (51%), Gaps = 1/354 (0%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R+ +    + + ++    K +G+    + LDE+R    +     + V+++G  + G  +
Sbjct: 60  RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    +  + C+P+   YN VL      + +  A  +  EM +  C PN+VTF++LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + L + G  E A+++L+++ + G  PN  +Y  ++   C+  + D+A      M   GC 
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V+YN LL   C+   VD A+ LL   +  G  P L SY+ +IDGL +A +  EA   
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 299

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + ++PD++ Y  +  GL    +++DA++    +++ GI P+T  YNA+I G C 
Sbjct: 300 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 359

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAG 408
                 A  L   +     +PN  T+TILI G+   G++ +A+ L +++  +AG
Sbjct: 360 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAG 413



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 198/448 (44%), Gaps = 58/448 (12%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ ++ G   A + D   A  R + E  +EPD   Y  +IRGL   G+  +A+ +L +M
Sbjct: 2   AYNAMVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             R  VPD   Y  L++  C      QA  L  E+  +   P+  T+ +++ G+C+ G V
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQ 453
           DDA +    +   GC P+   +N ++ GLC A   E A  L  +M + G  P +      
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV----- 173

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   ++   C  GL+  A ++L Q+ + G  P+ ++YN L++ FCK   ++
Sbjct: 174 ---------TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMD 224

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+     +  +G  PD V+Y TL+  L R    + A  +  Q+   GC P    Y +++
Sbjct: 225 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 284

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
               +                  +G+  E+++ + E + KG   + I             
Sbjct: 285 DGLTK------------------AGKTKEALELLNEMVSKGLQPDIIT------------ 314

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
               Y+    GLC++ ++++A+  F    + + +   P+ V    +I GLCKR     A+
Sbjct: 315 ----YSTIAAGLCREDRIEDAIRAFG---KVQDMGIRPNTVLYNAIILGLCKRRETHSAI 367

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           D+F Y + NG +        L+  L + 
Sbjct: 368 DLFAYMIGNGCMPNESTYTILIEGLAYE 395



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 9/219 (4%)

Query: 4   TLNEVLTILDTVTPIEPALEPL--LP-------FLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           T N +++ L     +EPALE L  +P        LS   +     K K       F    
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
             R       S + +++ L +    D+  + L +L+    + V   +  +I G  K G  
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +M     QPD+  Y+ +     R+     A+  + ++  +   PN V ++ +
Sbjct: 294 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           I GL K  +T  AI +   M   G +PN+ TYTI+I GL
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 248/521 (47%), Gaps = 13/521 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    + + L S    S   S + +   F+L      +L    ++       ++I+ + 
Sbjct: 75  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      A    GK+ +   +PD   +N ++   F +     A+ +   MV+  C P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ ++NG+ +SG T +A+ +L +M +R +  + FTY+ +I  LC+    D A  LF +M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +  G     V YN+L+ G CK  + ++   LL+       VP + +++ L+D   +  + 
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA   Y++M    I P+++ Y  ++ G     ++ +A  +L  M      PD   + +L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           IKG+C +  +D    +   I KR  + N  T++IL+ G C++G +  A++LF +M   G 
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V  +  L+DGLC  G+LEKA  +F  ++  K     +  +             T++E
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT-------------TIIE 481

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G +  A+ +   L   G  P+++TY  +I+G CK G+++ A  L ++++  G  P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +  TY TLI    R      + ++  +M   G +   +  K
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 256/514 (49%), Gaps = 16/514 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSL 173
           + A+  F +M      P +  ++   +   R + F L L  + + ++LN +  NI T ++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNI 128

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +IN   +  KT  A  +L ++ + G  P+  T+  +I GL    +  EA  L  +M ++G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C PD V YN+++NG C+      AL LLR  E+      + +YS +ID L R    D A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           + +++M  + I+  VV Y  ++RGL +AGK  D   LL DM  R IVP+   +N L+  F
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              G L +A  L  E+  R   PN  T+  L+ G C    + +A  + + M +  C P +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             F +LI G C    ++        M++ +N      +S+ G  V +  +   +V+ +C 
Sbjct: 369 VTFTSLIKGYCMVKRVDDG------MKVFRN------ISKRG-LVANAVTYSILVQGFCQ 415

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G I  A ++  ++   G LPD++TY  L++G C  G +  AL++F++LQ   +    V 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I G+ +  + EDA+ +F  +P  G  P+   Y  +++  C++   S A  L  +  
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            D +  +D +  + I   L+ G++  + + + EM
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 259/566 (45%), Gaps = 61/566 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + AI +  EM +   LP+   ++   S + +  + +       +++ +G + +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N FC+  +   A ++L    K G+ P   +++ LI GLF   +  EA     +M E 
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +PDVV Y  ++ G+  +G    A+ LL  M ER +  D + Y+ +I   C  G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  E+  +    +  T+  L+ G+C+ G  +D   L   M      P+V  FN L+D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             K G+L++AN L+ +M   G +P +               +  T+++ YC    + +A 
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNII--------------TYNTLMDGYCMQNRLSEAN 353

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  +  +   PDI+T+ SLI G+C V  ++  +K+F+ +  +GL  ++VTY  L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  + + A  +F +M  +G  P    Y  L+   C   K   A  ++            
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF------------ 461

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  E LQK ++               D  +  YT  + G+C+ G+V++A N+F  L
Sbjct: 462 -------EDLQKSKM---------------DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
             CK +   P+ +    +I GLCK+G L  A  +     ++G    P  C Y  L+R+ L
Sbjct: 500 -PCKGV--KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA--PNDCTYNTLIRAHL 554

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
             +D     +  L+  MKS G+  DA
Sbjct: 555 --RDGDLTASAKLIEEMKSCGFSADA 578



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 238/538 (44%), Gaps = 56/538 (10%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SG+  I + D+A  LF +M  S   P  V ++   +   + ++ +  L   +  E +G  
Sbjct: 62  SGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + + + +I+   R  +   AY+   K+ +   EPD   +  +I+GL   GKV +A+ L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M E G  PD   YN+++ G C  G    A  L  ++ +R+   +  T++ +I  +CR
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL 447
           +G +D A  LF +ME  G   SV  +N+L+ GLCKAG+     LL   M   EI  N   
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F                  +++ +   G + +A ++  ++   G  P+IITYN+L++G+C
Sbjct: 301 F----------------NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
               ++ A  +   +      PD VT+ +LI G   V R +D  ++F  + + G   +  
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  L+   C+  K  LA                      EE  Q    E    G+L   
Sbjct: 405 TYSILVQGFCQSGKIKLA----------------------EELFQ----EMVSHGVLP-- 436

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  Y I L GLC +G++++AL IF  L + K  +       +I G+CK G ++
Sbjct: 437 ------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            A ++F      G  ++P V  Y +      K      A  LL +M+  G   + C Y
Sbjct: 491 DAWNLFCSLPCKG--VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 165/360 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L +    D       E+ +  +      +  L+ G  K G           M  
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  P+V  +N +L++  ++     A  +Y EM+     PNI+T++ L++G     +   
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  MLD M +    P+  T+T +I G C + R D+  ++F  +   G   + V Y+ L+ 
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+  ++  A  L +     G +P + +Y  L+DGL    + ++A   +  + + K++ 
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V+Y  +I G+ + GKV+DA  L   +  +G+ P+   Y  +I G C  G L +A  L 
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ +  + PN  T+  LI    R+G +  + KL  +M+  G          +ID L  A
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 89/189 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G+ + G  + A E F +M      PDV  Y  +L+          AL ++ ++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K      IV ++ +I G+ K GK E A  +   +  +G+ PN  TYT++ISGLC+    
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L  KM++ G +P+   YN L+    +   +  +  L+   +  GF     S   +
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584

Query: 280 IDGLFRAKR 288
           ID L  A +
Sbjct: 585 IDMLLSAMK 593


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 233/461 (50%), Gaps = 18/461 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI-YNAVLNIAFRKQLFLLALAVYYEM 159
           FF L       G+  KAL SF ++ +       +  Y  +L        F  AL ++  M
Sbjct: 5   FFQLHRNRLVKGNSGKAL-SFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHM 63

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+   LP+I+ F+ L+N ++K  K +V I + D +   G+  + +T  ++++  CQ ++ 
Sbjct: 64  VESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQP 123

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A     KM   G  PD V + +L+NGFC   R++EA++++    + G  P +  Y+ +
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTI 183

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L +    + A + + +M    I PDVV+Y  ++ GL  +G+ +DA  LL  M +R I
Sbjct: 184 IDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   +NALI  F   G    A  L  E+ +    PN  T+T LI G C  G VD+A++
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F  ME  GCFP V  + +LI+G CK  +++ A  +FY+M            SQ G    
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM------------SQKG-LTG 350

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  T+++ +   G  + A ++   +   G  P+I TYN L++  C  G +  AL +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 520 KELQ---LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           +++Q   + G+ P+  TY  L++GL    + E A  +F  M
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 215/469 (45%), Gaps = 70/469 (14%)

Query: 113 DCEKALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           D  K L    KMK+FD                D+Y  N ++N   +     LA +   +M
Sbjct: 74  DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P+IVTF+ LING     + E A+ M+++M + GI P+   YT +I  LC+    
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  LF +M++ G  PD V Y +L+NG C   R  +A +LLR   K    P + +++ L
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEP--------------------------------- 306
           ID   +  ++ +A   Y +M    I P                                 
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313

Query: 307 --DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             DVV Y  +I G  +  KV DAMK+  +M ++G+  +T  Y  LI+GF  +G  + A+ 
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA---GCFPSVGMFNALID 421
           +   +  R   PN  T+ +L+  +C NG V  A  +F  M+K    G  P++  +N L+ 
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433

Query: 422 GLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           GLC  G+LEKA ++F  M   E+      +  + QG                 C AG + 
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG----------------MCKAGKVK 477

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
            A  +   L   G  P+++TY ++I+G  + G  + A  LF++++  G+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 186/344 (54%), Gaps = 3/344 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I    K G    AL  F +M+ +  +PDV +Y +++N       +  A ++   M
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K    P+++TF+ LI+   K GK   A ++ +EM +  I PN FTYT +I+G C     
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++F  M+  GC PD VAY +L+NGFCK ++VD+A+ +     + G      +Y+ L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-- 337
           I G  +  + + A   +  M    + P++  Y V++  L   GKVK A+ +  DM++R  
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418

Query: 338 -GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P+ + YN L+ G C  G L++A  +  ++ KR+      T+TI+I GMC+ G V +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           A  LF  +   G  P+V  +  +I GL + G   +A++LF KM+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 235/518 (45%), Gaps = 46/518 (8%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  LF  M +S   P  + +  LLN   K+++ D  + L    +  G    L + + L
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++   ++ +   A ++  KM +   EPD+V +  +I G     ++++AM +++ M E GI
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y  +I   C  G ++ A SL  ++      P+   +T L+ G+C +G   DA  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           L   M K    P V  FNALID   K G+   A  L+ +M         +R+S   N   
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM---------IRMSIAPNIF- 283

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +  +++  +C  G + +A ++   +   G  PD++ Y SLINGFCK   ++ A+K+F
Sbjct: 284 ---TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+  KGL  +++TY TLI G  +V +   A  +F  M   G  P+   Y  L+   C  
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
            K   A  ++                   E +QK E++     +              Y 
Sbjct: 401 GKVKKALMIF-------------------EDMQKREMDGVAPNIW------------TYN 429

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           + L GLC +G++++AL +F  + + +  +   +   +I G+CK G +  A+++F      
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           G  ++P V  Y        ++  K  A+ L  +MK  G
Sbjct: 490 G--VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 202/459 (44%), Gaps = 50/459 (10%)

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           F  Y  +L       + +EAL L     +   +P +  ++ L++ + + K++D       
Sbjct: 37  FCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            +    +  D+    +++    ++ +   A   L  M + G  PD   + +LI GFC   
Sbjct: 97  HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A S+  ++ +    P+   +T +I  +C+NG V+ A  LF++ME  G  P V M+ 
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +L++GLC +G    A+ L   M   K                D  +   +++ +   G  
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKP-------------DVITFNALIDAFVKEGKF 263

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A ++  ++      P+I TY SLINGFC  G ++ A ++F  ++ KG  PD V Y +L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ING  +  + +DA +IF +M Q G T +   Y +L                         
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL------------------------- 358

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                    I+ F Q G+   A +    M  +     +  Y + L  LC +G+VK+AL I
Sbjct: 359 ---------IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409

Query: 658 FSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
           F  + + +     P+      L+HGLC  G L+ A+ VF
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 170/345 (49%), Gaps = 3/345 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    +      D++ +  +     ++  L++G    G    A      M +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  +NA+++   ++  FL A  +Y EM++++  PNI T++ LING    G  + 
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +M   M  +G  P+   YT +I+G C+  + D+A ++F +M   G + + + Y  L+ 
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE- 305
           GF ++ + + A  +       G  P + +Y+ L+  L    +  +A   +  M + +++ 
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420

Query: 306 --PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P++  Y V++ GL   GK++ A+ +  DMR+R +      Y  +I+G C  G +  A 
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +L   +  +   PN  T+T +I G+ R G+  +A  LF KM++ G
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 3/288 (1%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            KRK      + +A+I   +K   F    +  +E+   +++     +  LI+G+   G  
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++A + F  M+   C PDV  Y +++N   + +    A+ ++YEM +     N +T++ L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--- 231
           I G  + GK  VA ++   M  RG+ PN  TY +++  LC   +  +A  +F  M+    
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G +P+   YN LL+G C   ++++AL +     K      + +Y+ +I G+ +A +   
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           A   +  +  + ++P+VV Y  MI GL   G   +A  L   M+E G+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 38/207 (18%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+   K    D   +   E+    ++  +  +  LI G+ +VG    A E F  M  
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN---CLPNIVTFSLLINGLSKSGK 183
               P++  YN +L+          AL ++ +M K       PNI T+++L++GL  +GK
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440

Query: 184 TEVAIKMLDEMTQR-----------------------------------GILPNKFTYTI 208
            E A+ + ++M +R                                   G+ PN  TYT 
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCS 235
           +ISGL +     EA+ LF KMK+ G S
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 248/521 (47%), Gaps = 13/521 (2%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F    + + L S    S   S + +   F+L      +L    ++       ++I+ + 
Sbjct: 75  LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      A    GK+ +   +PD   +N ++   F +     A+ +   MV+  C P++V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ ++NG+ +SG T +A+ +L +M +R +  + FTY+ +I  LC+    D A  LF +M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +  G     V YN+L+ G CK  + ++   LL+       VP + +++ L+D   +  + 
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA   Y++M    I P+++ Y  ++ G     ++ +A  +L  M      PD   + +L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           IKG+C +  +D    +   I KR  + N  T++IL+ G C++G +  A++LF +M   G 
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V  +  L+DGLC  G+LEKA  +F  ++  K     +  +             T++E
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT-------------TIIE 481

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G +  A+ +   L   G  P+++TY  +I+G CK G+++ A  L ++++  G  P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +  TY TLI    R      + ++  +M   G +   +  K
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 256/514 (49%), Gaps = 16/514 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSL 173
           + A+  F +M      P +  ++   +   R + F L L  + + ++LN +  NI T ++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHNIYTLNI 128

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           +IN   +  KT  A  +L ++ + G  P+  T+  +I GL    +  EA  L  +M ++G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C PD V YN+++NG C+      AL LLR  E+      + +YS +ID L R    D A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           + +++M  + I+  VV Y  ++RGL +AGK  D   LL DM  R IVP+   +N L+  F
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              G L +A  L  E+  R   PN  T+  L+ G C    + +A  + + M +  C P +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             F +LI G C    ++        M++ +N      +S+ G  V +  +   +V+ +C 
Sbjct: 369 VTFTSLIKGYCMVKRVDDG------MKVFRN------ISKRG-LVANAVTYSILVQGFCQ 415

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G I  A ++  ++   G LPD++TY  L++G C  G +  AL++F++LQ   +    V 
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I G+ +  + EDA+ +F  +P  G  P+   Y  +++  C++   S A  L  +  
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535

Query: 594 RDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            D +  +D +  + I   L+ G++  + + + EM
Sbjct: 536 EDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 259/566 (45%), Gaps = 61/566 (10%)

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + AI +  EM +   LP+   ++   S + +  + +       +++ +G + +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++N FC+  +   A ++L    K G+ P   +++ LI GLF   +  EA     +M E 
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             +PDVV Y  ++ G+  +G    A+ LL  M ER +  D + Y+ +I   C  G +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            SL  E+  +    +  T+  L+ G+C+ G  +D   L   M      P+V  FN L+D 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 423 LCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             K G+L++AN L+ +M   G +P +               +  T+++ YC    + +A 
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNII--------------TYNTLMDGYCMQNRLSEAN 353

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L  +  +   PDI+T+ SLI G+C V  ++  +K+F+ +  +GL  ++VTY  L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  + + A  +F +M  +G  P    Y  L+   C   K   A  ++            
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF------------ 461

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  E LQK ++               D  +  YT  + G+C+ G+V++A N+F  L
Sbjct: 462 -------EDLQKSKM---------------DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 662 VECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLL 716
             CK +   P+ +    +I GLCK+G L  A  +     ++G    P  C Y  L+R+ L
Sbjct: 500 -PCKGV--KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN--APNDCTYNTLIRAHL 554

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDA 742
             +D     +  L+  MKS G+  DA
Sbjct: 555 --RDGDLTASAKLIEEMKSCGFSADA 578



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 141/538 (26%), Positives = 238/538 (44%), Gaps = 56/538 (10%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SG+  I + D+A  LF +M  S   P  V ++   +   + ++ +  L   +  E +G  
Sbjct: 62  SGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + + + +I+   R  +   AY+   K+ +   EPD   +  +I+GL   GKV +A+ L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M E G  PD   YN+++ G C  G    A  L  ++ +R+   +  T++ +I  +CR
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL 447
           +G +D A  LF +ME  G   SV  +N+L+ GLCKAG+     LL   M   EI  N   
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F                  +++ +   G + +A ++  ++   G  P+IITYN+L++G+C
Sbjct: 301 F----------------NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
               ++ A  +   +      PD VT+ +LI G   V R +D  ++F  + + G   +  
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  L+   C+  K  LA                      EE  Q    E    G+L   
Sbjct: 405 TYSILVQGFCQSGKIKLA----------------------EELFQ----EMVSHGVLP-- 436

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  Y I L GLC +G++++AL IF  L + K  +       +I G+CK G ++
Sbjct: 437 ------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            A ++F      G  ++P V  Y +      K      A  LL +M+  G   + C Y
Sbjct: 491 DAWNLFCSLPCKG--VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 196/428 (45%), Gaps = 5/428 (1%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           ++E + ++D +  +E   +P    ++  ++ + I ++ +  +         +R       
Sbjct: 174 VSEAVVLVDRM--VENGCQP--DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + S +I  L +    D       E+ +  +      +  L+ G  K G           M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
              +  P+V  +N +L++  ++     A  +Y EM+     PNI+T++ L++G     + 
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A  MLD M +    P+  T+T +I G C + R D+  ++F  +   G   + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + GFC+  ++  A  L +     G +P + +Y  L+DGL    + ++A   +  + + K+
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +  +V+Y  +I G+ + GKV+DA  L   +  +G+ P+   Y  +I G C  G L +A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  ++ +  + PN  T+  LI    R+G +  + KL  +M+  G          +ID L 
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589

Query: 425 KAGELEKA 432
            +GEL+K+
Sbjct: 590 -SGELDKS 596


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 281/595 (47%), Gaps = 36/595 (6%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLF 226
           VT +  I    ++G  + A+ MLD+M +RG    P+   +T  +  LC++ R ++A  LF
Sbjct: 54  VTCTECIQAFGRAGDLDAAMGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLF 112

Query: 227 LKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLF 284
             M+++  C+PD VAYN L+ G+CK    D AL + R  +++G   P   S+  L+  L 
Sbjct: 113 DDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLC 172

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R  +A A +++M    ++ DV +   +I      G ++ A +LL  M       D +
Sbjct: 173 KMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAF 232

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNK 403
            Y  L+   C  G + +  S  +E+ + D    +   +  +I G  R G + +A +LF  
Sbjct: 233 TYGILVNAHCRAGQMHEVASF-MELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFES 291

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
                  P V  +N LI  LCK+ +LE+A  LF + E            QGG  V D  +
Sbjct: 292 TMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAE------------QGG-VVLDVFT 337

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +++ +  AG   KA ++   + ++G +PD + YN LI+   K G ++ AL+L +++ 
Sbjct: 338 YSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            KG+ PD  TY  +I+ L    R E A+  FG M +   +P    Y +L+    + R+  
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 457

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAP----Y 638
            A  L+ +   +    D  +  ++ + L K G +E+A    LE   +L     AP    Y
Sbjct: 458 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDA----LEQSARLVKMGHAPNSYIY 513

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
              + G C+ GQV +   +F  ++EC       +   L+ G  +RG+  +AM++    ++
Sbjct: 514 NALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 573

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLP 753
            G        N L+RSL  S   +   AY L   M + G++ D     +T S LP
Sbjct: 574 EGHTPALATYNVLIRSL--SMAGQVEDAYTLFKEMIAKGFNPDM----QTYSALP 622



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 238/513 (46%), Gaps = 50/513 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  LI+GY K GD ++AL+ F ++K E  C+P+   ++ ++    +      ALAV+ E
Sbjct: 127 AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQE 186

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+      ++   + LI+   + G    A ++L  MT      + FTY I+++  C+  +
Sbjct: 187 MLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQ 246

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGF------------------------------ 248
             E        +  GC+   V YN ++ GF                              
Sbjct: 247 MHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNL 306

Query: 249 ----CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
               CK ++++EAL L +  E+ G V  + +YS L+D   +A R  +A   +  M +   
Sbjct: 307 LIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGC 366

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD V+Y V+I  L + GKV +A++LL DM  +GI+PD   YN +I      G  ++A S
Sbjct: 367 MPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYS 426

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
               + +R   P+  T+  L+ G+ +    D+A  LF++M+   C P +  F  LID L 
Sbjct: 427 FFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLA 486

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG +E A     ++ ++G  P  ++                 ++  +C +G + K Y++
Sbjct: 487 KAGRMEDALEQSARLVKMGHAPNSYI--------------YNALISGFCRSGQVDKGYEL 532

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              + E    PD ITY  L+ GF + G+ + A++L +E+  +G  P   TY  LI  L  
Sbjct: 533 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 592

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
             + EDA+ +F +M   G  P    Y +L   S
Sbjct: 593 AGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLS 625



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 265/566 (46%), Gaps = 26/566 (4%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL- 162
           I  + + GD + A+     M+  + CQPD   + A ++     +    A+ ++ +M +  
Sbjct: 60  IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADE 221
           +C P++V ++ LI G  K+G  + A+ M   + Q G   PN  ++  ++  LC+++RA +
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  +F +M  +G   D    N L++  C+L  + +A  LL             +Y  L++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
              RA +  E  ++      +      V Y  +I+G    G++ +A +L      +  VP
Sbjct: 240 AHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP 299

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D + YN LI   C    L++A +L  E  +   + +  T++ L+    + G    A ++F
Sbjct: 300 DVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVF 358

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR---V 458
             M+KAGC P   ++N LI  L K G++++A                L L +  NR   +
Sbjct: 359 YNMQKAGCMPDTVVYNVLISCLGKQGKVDEA----------------LELLEDMNRKGIM 402

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +++   + G   KAY     +    + PD++TYN+L+NG  K+   + A  L
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F E+Q     PD  T+GTLI+ L +  R EDA     ++ + G  P+  +Y +L++  CR
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCR 522

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             +    + L+ Q + + S   D    +I    F ++G    A++ L EM  + +   LA
Sbjct: 523 SGQVDKGYELF-QDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALA 581

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLV 662
            Y + +  L   GQV++A  +F  ++
Sbjct: 582 TYNVLIRSLSMAGQVEDAYTLFKEMI 607



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 1/324 (0%)

Query: 97  VSDVF-FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V DVF + L+    K    E+AL  F + ++     DV+ Y+ +++   +      AL V
Sbjct: 298 VPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEV 357

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +Y M K  C+P+ V +++LI+ L K GK + A+++L++M ++GI+P+  TY IVI  L  
Sbjct: 358 FYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSS 417

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             R ++AY  F  MK    SPD V YN LLNG  KLRR DEA  L    + +  +P L +
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           +  LID L +A R ++A     ++ +    P+  +Y  +I G   +G+V    +L  DM 
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMI 537

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E    PD+  Y  L+ GF   G    A  L  E+ +    P   T+ +LI  +   G V+
Sbjct: 538 ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVE 597

Query: 396 DAQKLFNKMEKAGCFPSVGMFNAL 419
           DA  LF +M   G  P +  ++AL
Sbjct: 598 DAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 103/213 (48%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGN 93
           V  V+      +  + FF    +RK      + + +++ L K    D      DE+++  
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
                  F  LI    K G  E ALE   ++ +    P+ YIYNA+++   R        
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            ++ +M++ +C P+ +T+++L+ G S+ G T +A+++L EM + G  P   TY ++I  L
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 590

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
               + ++AY LF +M   G +PD   Y+AL N
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 166/656 (25%), Positives = 305/656 (46%), Gaps = 58/656 (8%)

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           V +  FR   F  A+ V+Y + +    P++ T +  ++ L K+ + E   ++   M++ G
Sbjct: 157 VYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-G 215

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             P+ F++T VI+ LC+  + + A  LF+KM+  G SP+ V YN ++NG C+  R+D A 
Sbjct: 216 ACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAF 275

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L       G  P L +Y  LI+GL +   +D+      +M      P+VV++  +I G 
Sbjct: 276 ELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGY 335

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI--------- 369
            + G ++ A+K+   M  + I P +    +L++GFC    ++ A +   EI         
Sbjct: 336 CKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHP 395

Query: 370 --------W------------------KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                   W                   R+  P+    T+L+CG+C++G   +A +L+ +
Sbjct: 396 DNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFR 455

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           + + G   S    NALI GLC AG+L +A+ +  +M           L +G     D+ +
Sbjct: 456 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM-----------LERG--LPMDRIT 502

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  +C  G +   +++  ++ + G  PDI TYN L+ G C VG ++ A+KL+ E +
Sbjct: 503 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 562

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             GL  +  TYG ++ G  + +R ED   +F ++       +  VY  ++   C+    +
Sbjct: 563 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVA 622

Query: 584 LAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
            A  L L+ ++      + +  S  I      G VE+A   + EM  +     +  YT  
Sbjct: 623 AALQL-LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTAL 681

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G C+ GQ+  A + +  ++         +   +I G CK G ++ A ++ +   ++G 
Sbjct: 682 IGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGI 741

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWN 757
           +  P V  Y + +  F K N   +A+ +  +M + G  +D   Y    +L+ G WN
Sbjct: 742 V--PDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITY---TTLVHG-WN 791



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/665 (24%), Positives = 290/665 (43%), Gaps = 66/665 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLD-ELRSGNVSVVSDVFFVL---------------ISGYYK 110
           ++V+        FDL       + R+   S   DVF++L               +S   K
Sbjct: 139 TSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVK 198

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
             + EK  E F  M E  C PDV+ +  V+N   +      A+ ++ +M KL   PN+VT
Sbjct: 199 ANEFEKCCEVFRVMSEGAC-PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVT 257

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ +INGL ++G+ + A ++ ++MT +G+ PN  TY  +I+GL ++N  D+   +  +M 
Sbjct: 258 YNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMI 317

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK--- 287
            +G +P+ V +N L++G+CK+  ++ AL +          P   +   L+ G  ++    
Sbjct: 318 GAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIE 377

Query: 288 --------------------------------RYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
                                           RY  A+ + + M      P  +L  +++
Sbjct: 378 HAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLV 437

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL + GK  +A +L   + E+G        NALI G C  G L +A  +  E+ +R   
Sbjct: 438 CGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            +  T+  LI G C  G V+   +L  +M K G  P +  +N L+ GLC  G+L+ A  L
Sbjct: 498 MDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKL 557

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           + +              +    + +  +   M+E YC A  I     +  +L       +
Sbjct: 558 WDEF-------------KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN 604

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            I YN +I   C+ GN+  AL+L + ++ KG+ P+  TY +LI+G+  +   EDA  +  
Sbjct: 605 SIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLID 664

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQKG 614
           +M + G  P+   Y +L+   C+  +   A S WL+ +  +I          I+ + + G
Sbjct: 665 EMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG 724

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            +E A   L++M        +  Y +   G C+   +  A  +   +      V   +  
Sbjct: 725 NMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYT 784

Query: 675 KLIHG 679
            L+HG
Sbjct: 785 TLVHG 789



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 260/583 (44%), Gaps = 85/583 (14%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            S T V + + K    +     F+   K     +  + + +I+ L +    D  ++  ++
Sbjct: 221 FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 280

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    V      +  LI+G  K+   +K      +M      P+V ++N +++   +   
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI--------- 199
              AL +   M+  N  P  VT   L+ G  KS + E A   L+E+   G+         
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 400

Query: 200 ----LPNKFTY----------------------TIVISGLCQINRADEAYRLFLKMKDSG 233
               L  KF Y                      T+++ GLC+  +  EA  L+ ++ + G
Sbjct: 401 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
                V  NAL++G C   ++ EA  +++   + G      +Y+ LI G     + +  +
Sbjct: 461 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 520

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK---------LLSDMRERGIVPDTY 344
               +M +  I+PD+  Y  ++RGL   GK+ DA+K         L+S++   GI+ + Y
Sbjct: 521 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 580

Query: 345 C--------------------------YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           C                          YN +IK  C  G +  A  L   +  +  LPN 
Sbjct: 581 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 640

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T++ LI G+C  G+V+DA+ L ++M K G  P+V  + ALI G CK G+++ A   + +
Sbjct: 641 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 700

Query: 439 MEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M I  N             +H +K +   M++ YC  G + KA  +L+++ ESG +PD++
Sbjct: 701 M-ISFN-------------IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 746

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           TYN L NGFCK  +++ A K+  ++  +GL  D +TY TL++G
Sbjct: 747 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/610 (25%), Positives = 283/610 (46%), Gaps = 28/610 (4%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL- 60
           +  +  VL    ++  +E  LE L   L    V  V+    + ++  RF+ WA  R    
Sbjct: 64  ADVIGRVLERGQSLDSVELELERLHVDLDPFVVNRVLRSISDSEMAVRFYWWAESRPGFD 123

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
            +  + + V+S+L   + F L  + L+ +RS  V++   ++ +L+SGY + G  +  + +
Sbjct: 124 HTQFAIAYVVSLLFVDSNFFLLSEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHT 183

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV--KLNCLPNIVTFSLLINGL 178
           F +M    C+     YN  + +  +   F L +  YY +   K  CL +  T+S  I+ L
Sbjct: 184 FDEMVTSGCREFGVDYNRFIGVLVKNCCFDL-VEKYYSVALDKGFCLTSF-TYSRWISAL 241

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            +S + E+  ++L +M + G  P+ +   I +  LC+ NR  +A +    M   G +PD 
Sbjct: 242 CQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDV 301

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V Y  ++   C  ++  EA+ L     + G  P + +   LI GL ++ + DEA+    +
Sbjct: 302 VTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALR 361

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M    +E +V +Y  +I G   +G +  A K++S MR  G  PD   YN  +  +C+ G+
Sbjct: 362 MLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGM 421

Query: 359 LDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
           + +A  L  E+     + P+ +++  ++ G+C+   +D A    +   + G F  +   N
Sbjct: 422 IKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCN 481

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGL 476
            LID  CKA ++  A  LF +M              G   +  D  +  T++      G 
Sbjct: 482 ILIDAFCKAKKVSSALKLFKEM--------------GYKGIQADAVTYGTLINGLYGVGY 527

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
            + A +I  Q+ ++  +P++  YN +++  CK G    A K+F ++  K + PD +T+ T
Sbjct: 528 YYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNT 587

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL--- 593
           LI  L +  R  +A  +F  M   G  P    ++ L++      K + A+ +W   L   
Sbjct: 588 LIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENG 647

Query: 594 ----RDISGR 599
               RD+S R
Sbjct: 648 IILDRDVSDR 657



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 147/388 (37%), Gaps = 54/388 (13%)

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF---CDLGLLDQARSLQ 366
           LY +++ G   AGK    +    +M   G       YN  I      C   L+++  S+ 
Sbjct: 163 LYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGVLVKNCCFDLVEKYYSVA 222

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           ++   +     + T++  I  +C++  ++  ++L   M+K GCFP +   N  +D LCK 
Sbjct: 223 LD---KGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPDIWACNIYVDCLCKH 279

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
             L  A      M I G NP              D  +  T+V   C      +A ++  
Sbjct: 280 NRLHDALKTLENMWIRGTNP--------------DVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  PDI+    LI G CK   ++ A +L   +    L  +   Y  LI+G  R  
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
               AF+I   M  NGC P    Y   +   C                   +G   E+ K
Sbjct: 386 SINKAFKIISVMRTNGCEPDVVTYNIRLNHYCN------------------TGMIKEAEK 427

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            IEE              +EM   +N  + + Y   L GLC+  Q+  A    S  +E  
Sbjct: 428 LIEE--------------MEMSGIVNPDRYS-YNQMLKGLCKAHQLDRAFGFVSDHMEVG 472

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                 SC  LI   CK   +  A+ +F
Sbjct: 473 GFCDIVSCNILIDAFCKAKKVSSALKLF 500


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 174/694 (25%), Positives = 308/694 (44%), Gaps = 61/694 (8%)

Query: 26  LPFLSKTTVTSVIMKT-KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQ 84
           L FL++  V+ V+ +           F+W   R     F+    ++   +K        +
Sbjct: 149 LRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALE 208

Query: 85  TLDELR----SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
            L ++R    + N S +S +F +LI    + GDC    + FG +      P+ + +N ++
Sbjct: 209 ILSKMREVGVTPNPSAISILFRLLI----RAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 264

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               RK    +  A+ + M K  C P++ +++++IN     G++  A+ +L+ M + G  
Sbjct: 265 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 324

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+  T+  +I   C+    + A + F +++D G S + + YN +++G+ K R + +A  L
Sbjct: 325 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 384

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                    VP   +++ L+ G +R  + ++     R +    +  D  L  V + GL  
Sbjct: 385 FEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 444

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AG+  +AMKLL ++ E+GI P    +N++I  + + GL ++A      + K    P++ T
Sbjct: 445 AGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 504

Query: 381 FTILICGMCRNGMVDDAQ-KLFNKMEKAGCFPSVGM-FNALIDGLCKAGELEKANLLFYK 438
            + L+  + R G +D+A   L++ ++K   FP   M F  L+DG  + G +  A  L+ +
Sbjct: 505 CSSLLISLVRKGSLDEAWIALYDMIDKG--FPVTNMAFTVLLDGYFRIGAVNMAESLWNE 562

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M             +G     D  +    +   C +GL+  AY +   +   G +P+   
Sbjct: 563 M-------------KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFV 609

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YNSLI GFCKVG +N ALKL +E+  +GL PD  T   +I GL +  R + A   F  M 
Sbjct: 610 YNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMC 669

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + G +P    Y +L+   C+      AF        D+ G DD  MK  +   +      
Sbjct: 670 RMGLSPDIVTYNTLIDGYCK------AF--------DVGGADDLMMKMSDSGWEP----- 710

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                           L  Y I + G C   ++  A+ I   L+    +    +   +I+
Sbjct: 711 ---------------DLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMIN 755

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            +C    LD AM +    LK  F+      N LL
Sbjct: 756 AVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 788



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 246/508 (48%), Gaps = 17/508 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +I  + K G+ E A + F ++++     +  +YN +++   + +    A  ++ EM 
Sbjct: 330 FCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMR 389

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             + +P+ +TF+ L+ G  + GK E   ++L +++  G+L +     + ++GLC   R D
Sbjct: 390 TKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYD 449

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA +L   + + G  P  VA+N+++  +      + A        K G  P   + S L+
Sbjct: 450 EAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLL 509

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R    DEA+     M ++      + + V++ G    G V  A  L ++M+ RG+ 
Sbjct: 510 ISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVF 569

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   + A I G C  GL+  A  +  ++ ++  +PN   +  LI G C+ G +++A KL
Sbjct: 570 PDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKL 629

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
             +M K G  P +   N +I GLCK G ++ A   F  M  +G +P              
Sbjct: 630 VREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP-------------- 675

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T+++ YC A  +  A  ++M++++SG  PD+ TYN  I+G+C V  IN A+ + 
Sbjct: 676 DIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMIL 735

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +EL   G+ P++VTY T+IN +  V  +  A  +  ++ +    P+      L++  C++
Sbjct: 736 EELISVGIVPNTVTYNTMINAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCKQ 794

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSI 607
                A   W Q L +I    DE+   +
Sbjct: 795 GMPEKAI-FWGQKLSEIHLDFDETTHKL 821



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 3/338 (0%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F  +I+ Y   G  E+A  ++G M +F   P     +++L    RK     A  
Sbjct: 466 SVVA--FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 523

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
             Y+M+        + F++L++G  + G   +A  + +EM  RG+ P+   +   I+GLC
Sbjct: 524 ALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLC 583

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                 +AY +F  M   G  P+   YN+L+ GFCK+ +++EAL L+R   K G +P + 
Sbjct: 584 ISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIF 643

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I GL +  R   A   +  M    + PD+V Y  +I G  +A  V  A  L+  M
Sbjct: 644 TVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 703

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  PD   YN  I G+C +  +++A  +  E+     +PNT T+  +I  +C N ++
Sbjct: 704 SDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVIL 762

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           D A  L  K+ K    P+    N L+   CK G  EKA
Sbjct: 763 DHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 800



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S ++ S+++  L++    D  W  L ++      V +  F VL+ GY+++G    A   +
Sbjct: 501 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 560

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK     PD   + A +N      L   A  V+ +M++   +PN   ++ LI G  K 
Sbjct: 561 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 620

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK   A+K++ EM +RG+LP+ FT  ++I GLC+  R   A   F+ M   G SPD V Y
Sbjct: 621 GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTY 680

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L++G+CK   V  A  L+      G+ P L +Y+  I G    ++ + A     ++  
Sbjct: 681 NTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELIS 740

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I P+ V Y  MI  +     +  AM L + + +   VP+T   N L+  FC  G+ ++
Sbjct: 741 VGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEK 799

Query: 362 A 362
           A
Sbjct: 800 A 800


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 218/467 (46%), Gaps = 13/467 (2%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+     M     +P+V  +N V+N   R    +   +V   M K+   P+IVTF+ ++N
Sbjct: 45  AISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 104

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL   G    AI+ +D +   G   +++T   +I+GLC++  +  A     KM++  C+ 
Sbjct: 105 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 164

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  AY+A+++G CK   V EAL L       G  P L +Y+CLI GL    R+ EA    
Sbjct: 165 DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M  + I PDV  + V+     + G +  A  + S M   GI  +   YN++I   C L
Sbjct: 225 ANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCML 284

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +  A  +   + ++  LPN  T+  LI G C    ++ A     +M   G  P V  +
Sbjct: 285 NQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTW 344

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           + LI G CKAG+   A  LF+ M                 ++ D  +   +++       
Sbjct: 345 STLIGGFCKAGKPVAAKELFFVM-------------HKHGQLPDLQTCAIILDGLFKCHF 391

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             +A  +  +L +  +  DII Y+ ++NG C  G +N AL+LF  L  KG++ D VTY  
Sbjct: 392 HSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNI 451

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           +INGL +    +DA  +  +M +NGC P    Y   +    RR + S
Sbjct: 452 MINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEIS 498



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 232/516 (44%), Gaps = 27/516 (5%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
            ++ A + Y   + MK   C  DF   N L     K++    A++L++     G  P + 
Sbjct: 6   SVDVALDFYHKMVTMKPFPCVKDF---NLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVS 62

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ +I+ L R       ++    MF+  +EP +V +  ++ GL   G V  A++ +  +
Sbjct: 63  THNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL 122

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           ++ G   D Y   A+I G C +G    A S   ++ +++   +   ++ ++ G+C++GMV
Sbjct: 123 KDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMV 182

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQ 453
            +A  LF++M   G  P++  +N LI GLC      E A LL   M  G  P        
Sbjct: 183 FEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMP-------- 234

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +   +  ++   G+I +A  I   +   G   +++TYNS+I   C +  + 
Sbjct: 235 ------DVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMK 288

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+++F  +  KG  P+ VTY +LI+G         A    G+M  NG  P    + +L+
Sbjct: 289 DAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLI 348

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-D 632
              C+  K   A  L+    +     D ++   I + L K    +    L     K+N D
Sbjct: 349 GGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSD 408

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  Y+I L G+C  G++ +AL +FS L      +   +   +I+GLCK G LD A D+
Sbjct: 409 LDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDL 468

Query: 693 FLYTLKNGFILRPRVCNY------LLRSLLFSKDNK 722
            +   +NG    P  C Y      LLR    SK  K
Sbjct: 469 LMKMEENG--CPPDECTYNVFVQGLLRRYEISKSTK 502



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 207/453 (45%), Gaps = 49/453 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I+G  KVG    AL    KM+E +C  DV  Y+AV++   +  +   AL ++ +M    
Sbjct: 137 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKG 196

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+ T++ LI+GL    + + A  +L  M ++GI+P+  T+ ++     +      A 
Sbjct: 197 IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAK 256

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +F  M   G   + V YN+++   C L ++ +A+ +     + G +P + +Y+ LI G 
Sbjct: 257 SIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
              K  ++A  +  +M    ++PDVV +  +I G  +AGK   A +L   M + G +PD 
Sbjct: 317 CETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 376

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                ++ G        +A SL  E+ K +S  +   ++I++ GMC +G ++DA +LF+ 
Sbjct: 377 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           +   G    V  +N +I+GLCK G L+ A  L  KME                       
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME----------------------- 473

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
                                    E+G  PD  TYN  + G  +   I+ + K    ++
Sbjct: 474 -------------------------ENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMK 508

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            KG R ++ T   LIN     ++E  AF++F Q
Sbjct: 509 GKGFRANATTTKLLINYFS-ANKENRAFQVFLQ 540



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 175/379 (46%), Gaps = 35/379 (9%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           +  A+I+ L K          L ++   N ++    +  ++ G  K G   +AL+ F +M
Sbjct: 133 TRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQM 192

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                QP+++ YN +++       +  A  +   M++   +P++ TF+++     K+G  
Sbjct: 193 TGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMI 252

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A  +   M   GI  N  TY  +I   C +N+  +A  +F  M   GC P+ V YN+L
Sbjct: 253 SRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSL 312

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI------------------------ 280
           ++G+C+ + +++A+  L     +G  P + ++S LI                        
Sbjct: 313 IHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQ 372

Query: 281 -----------DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
                      DGLF+   + EA + +R++ +   + D+++Y +++ G+  +GK+ DA++
Sbjct: 373 LPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALE 432

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L S +  +G+  D   YN +I G C  GLLD A  L +++ +    P+  T+ + + G+ 
Sbjct: 433 LFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLL 492

Query: 390 RNGMVDDAQKLFNKMEKAG 408
           R   +  + K    M+  G
Sbjct: 493 RRYEISKSTKYLMFMKGKG 511



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 102/461 (22%), Positives = 169/461 (36%), Gaps = 86/461 (18%)

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
             K  D A  +Y KM   K  P V  + ++   +++      A+ L+  M   G+ P+  
Sbjct: 3   NVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVS 62

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            +N +I   C L                    N   F   + G+               M
Sbjct: 63  THNIVINCLCRL--------------------NHTVFGFSVLGL---------------M 87

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            K G  PS+  F  +++GLC  G + +A               F+   +      D+ + 
Sbjct: 88  FKIGVEPSIVTFTTIVNGLCVEGNVAQA-------------IRFVDHLKDMGYESDRYTR 134

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C  G    A   L ++ E     D+  Y+++++G CK G +  AL LF ++  
Sbjct: 135 GAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTG 194

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG++P+  TY  LI+GL   DR ++A  +   M + G  P                    
Sbjct: 195 KGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD------------------- 235

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                +Q    I+GR          FL+ G +  A      M     +  +  Y   +  
Sbjct: 236 -----VQTFNVIAGR----------FLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGA 280

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
            C   Q+K+A+ +F +++    +    +   LIHG C+   ++ AM      + NG  L 
Sbjct: 281 HCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNG--LD 338

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY--DLDAC 743
           P V  +      F K  K V A  L   M   G   DL  C
Sbjct: 339 PDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTC 379



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 5/228 (2%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           E+  +N+ +  L  +  +   L+P    ++ +T+     K   P      F    K  +L
Sbjct: 318 ETKNMNKAMYFLGEM--VNNGLDP--DVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQL 373

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
               + + ++  L K +          EL   N  +   ++ ++++G    G    ALE 
Sbjct: 374 PDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALEL 433

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F  +     + DV  YN ++N   ++ L   A  +  +M +  C P+  T+++ + GL +
Sbjct: 434 FSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 493

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +   + K L  M  +G   N  T  ++I+     N+ + A+++FL+
Sbjct: 494 RYEISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKENRAFQVFLQ 540


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/551 (29%), Positives = 248/551 (45%), Gaps = 40/551 (7%)

Query: 60  LRSFASNSAVISMLLKPNG----FDLYW-------QTLDELRS-GNVSVVSDVF------ 101
           LR FA +S     LL P+     F  Y        Q LD LR+  +V V  D +      
Sbjct: 13  LRYFALSSNPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVALDFYHKMVTM 72

Query: 102 --------FVLISGYY-KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
                   F L+ G   K+     A+     M     +P+V  +N V+N   R    +  
Sbjct: 73  KPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFG 132

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
            +V   M K+   P+IVTF+ ++NGL   G    AI+ +D +   G   +++T   +I+G
Sbjct: 133 FSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIING 192

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC++  +  A     KM++  C+ D  AYNA+++G CK   V EA  L       G  P 
Sbjct: 193 LCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPD 252

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L +Y+CLI GL    R+ EA      M  + I PDV  + V+     + G +  A  + S
Sbjct: 253 LFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFS 312

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M   GI  D   Y+++I   C L  +  A  +   + ++  LPN  T+T LI G C   
Sbjct: 313 FMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIK 372

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            ++ A     +M   G  P++  +N LI G CKAG+   A  LF+ M             
Sbjct: 373 NMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVM------------- 419

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
               ++ D  +   +++         +A  +  +L +  +  DII Y+ ++NG C  G +
Sbjct: 420 HKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKL 479

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           N AL+LF  L  KG++ D VTY  +INGL +    +DA  +  +M +NGC P    Y   
Sbjct: 480 NDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVF 539

Query: 573 MTWSCRRRKFS 583
           +    RR + S
Sbjct: 540 VQGLLRRYEIS 550



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 135/579 (23%), Positives = 250/579 (43%), Gaps = 51/579 (8%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +AL  Y++MV +   P +  F+LL   ++K      AI ++  M+  G+ PN  T+ IVI
Sbjct: 61  VALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVI 120

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           + LC++N     + +   M   G  P  V +  ++NG C    V +A+  +   +  G+ 
Sbjct: 121 NCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYE 180

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
               +   +I+GL +      A ++ +KM E+    DV  Y  ++ GL + G V +A  L
Sbjct: 181 SDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDL 240

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            S M  +GI PD + YN LI G C+     +A  L   + ++  +P+  TF ++     +
Sbjct: 241 FSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLK 300

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            GM+  A+ +F+ M   G    V  ++++I   C   +++ A  +F          L +R
Sbjct: 301 TGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVF---------DLMIR 351

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                N V    +  +++  +C    ++KA   L ++  +G  P+I+T+N+LI GFCK G
Sbjct: 352 KGCLPNIV----TYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               A +LF  +   G  PD  T   +++GL +     +A  +F ++ +        +Y 
Sbjct: 408 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 467

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            ++   C   K + A  L+  YL         S K ++                      
Sbjct: 468 IILNGMCSSGKLNDALELF-SYL---------SSKGVK---------------------- 495

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDL 688
               +  Y I + GLC++G + +A ++   + E      P  C     + GL +R  +  
Sbjct: 496 --IDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC--PPDECTYNVFVQGLLRRYEISK 551

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           +    ++    GF         L+     +K+N+    +
Sbjct: 552 STKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQVF 590



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 239/536 (44%), Gaps = 33/536 (6%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
            ++ A + Y   + MK   C  DF   N L     K++    A++L++     G  P + 
Sbjct: 58  SVDVALDFYHKMVTMKPFPCVKDF---NLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVP 114

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +++ +I+ L R       ++    MF+  +EP +V +  ++ GL   G V  A++ +  +
Sbjct: 115 THNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL 174

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           ++ G   D Y   A+I G C +G    A S   ++ +++   +   +  ++ G+C++GMV
Sbjct: 175 KDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMV 234

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQ 453
            +A  LF++M   G  P +  +N LI GLC      E A LL   M  G  P        
Sbjct: 235 FEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMP-------- 286

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +   +  ++   G+I +A  I   +   G   D++TY+S+I   C +  + 
Sbjct: 287 ------DVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMK 340

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A+++F  +  KG  P+ VTY +LI+G   +     A    G+M  NG  P+   + +L+
Sbjct: 341 DAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLI 400

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-D 632
              C+  K   A  L+    +     D ++   I + L K    +    L     K+N D
Sbjct: 401 GGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSD 460

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  Y+I L G+C  G++ +AL +FS L      +   +   +I+GLCK G LD A D+
Sbjct: 461 LDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDL 520

Query: 693 FLYTLKNGFILRPRVCNY------LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +   +NG    P  C Y      LLR    SK  K       L  MK  G+  +A
Sbjct: 521 LMKMEENG--CPPDECTYNVFVQGLLRRYEISKSTK------YLMFMKGKGFRANA 568



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 165/342 (48%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +AV+  L K       W    ++    +      +  LI G       ++A      M  
Sbjct: 222 NAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMR 281

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  +N +     +  +   A +++  M  +    ++VT+S +I       + + 
Sbjct: 282 KGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKD 341

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ D M ++G LPN  TYT +I G C+I   ++A     +M ++G  P+ V +N L+ 
Sbjct: 342 AMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIG 401

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFCK  +   A  L     K G +P L + + ++DGLF+   + EA + +R++ +   + 
Sbjct: 402 GFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDL 461

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+++Y +++ G+  +GK+ DA++L S +  +G+  D   YN +I G C  GLLD A  L 
Sbjct: 462 DIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLL 521

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +++ +    P+  T+ + + G+ R   +  + K    M+  G
Sbjct: 522 MKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKG 563



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 5/282 (1%)

Query: 92  GNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           G++ +  DV  +  +I  +  +   + A+E F  M    C P++  Y ++++     +  
Sbjct: 315 GHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNM 374

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A+    EMV     PNIVT++ LI G  K+GK   A ++   M + G LP+  T  I+
Sbjct: 375 NKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAII 434

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           + GL + +   EA  LF +++      D + Y+ +LNG C   ++++AL L       G 
Sbjct: 435 LDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGV 494

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              + +Y+ +I+GL +    D+A     KM E    PD   Y V ++GL    ++  + K
Sbjct: 495 KIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTK 554

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            L  M+ +G   +      LI  F       + R+ QV + K
Sbjct: 555 YLMFMKGKGFRANATTTKLLINYF---SANKENRAFQVFLQK 593



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 154/389 (39%), Gaps = 20/389 (5%)

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +D A     ++      P    F +L   + +      A  L   M   G  P+V   N 
Sbjct: 59  VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNI 118

Query: 419 LIDGLCKAGE-LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +I+ LC+    +   ++L    +IG  P++               +  T+V   C  G +
Sbjct: 119 VINCLCRLNHTVFGFSVLGLMFKIGVEPSI--------------VTFTTIVNGLCVEGNV 164

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A + +  L + G   D  T  ++ING CKVG+ + AL   K+++ +    D   Y  +
Sbjct: 165 AQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAV 224

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ++GL +     +A+ +F QM   G  P    Y  L+   C   ++  A  L    +R   
Sbjct: 225 VDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGI 284

Query: 598 GRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             D ++   I   FL+ G +  A      M     +  +  Y+  +   C   Q+K+A+ 
Sbjct: 285 MPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAME 344

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           +F +++    +    +   LIHG C+   ++ AM      + NG  L P +  +      
Sbjct: 345 VFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNG--LDPNIVTWNTLIGG 402

Query: 717 FSKDNKKVHAYHLLCRMKSVGY--DLDAC 743
           F K  K V A  L   M   G   DL  C
Sbjct: 403 FCKAGKPVAAKELFFVMHKHGQLPDLQTC 431



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 1/189 (0%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K   P      F    K  +L    + + ++  L K +          EL   N  +   
Sbjct: 405 KAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDII 464

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ ++++G    G    ALE F  +     + DV  YN ++N   ++ L   A  +  +M
Sbjct: 465 IYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKM 524

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C P+  T+++ + GL +  +   + K L  M  +G   N  T  ++I+     N+ 
Sbjct: 525 EENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF-SANKE 583

Query: 220 DEAYRLFLK 228
           + A+++FL+
Sbjct: 584 NRAFQVFLQ 592


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/723 (23%), Positives = 310/723 (42%), Gaps = 65/723 (8%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRS 91
           +V  ++     P      F  AA++        +   +  L++ +G      Q  D ++ 
Sbjct: 77  SVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 136

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             V      F  + SG    G    A  +   M+E     + Y YN ++    +      
Sbjct: 137 QIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDAE 196

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ VY  MV+    P++ T+S+L+    K    +  + +L+EM  RG+ PN ++YTI I 
Sbjct: 197 AMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIR 256

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            L Q  R DEAY++  KM+DSGC PD V +  ++   C   R+ +A  +    +     P
Sbjct: 257 VLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKP 316

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y  L+D    +         +  M  +    ++V Y  ++  L + G++ +A+ + 
Sbjct: 317 DRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVF 376

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M+E+GI P+ Y YN+LI GF    + D+A  L   +      PN +T  + I    ++
Sbjct: 377 DEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKS 436

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP----- 445
           G    A + +  M+  G  P V   NA++  L ++G L  A  +FY++ ++G +P     
Sbjct: 437 GQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITY 496

Query: 446 TLFLRLSQGGNR----------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           T+ ++     ++                V D  +L ++++     G  ++A+K+  QL E
Sbjct: 497 TMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKE 556

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
               P   TYN+L++G  + G +   + L +E+      P+ +TY T+++ L +      
Sbjct: 557 MKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNC 616

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS------------ 597
           A  +   M + GCTP  + Y ++M    +  +F  AF ++ Q  + ++            
Sbjct: 617 AIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPS 676

Query: 598 ----GRDDESMKSIEEF--------------------LQKGEVENAI---QGLLEMDFKL 630
               G   E++ +++E+                    L K  VE +I   + +      L
Sbjct: 677 FVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILL 736

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           NDF L P    +  LC+  +  EA  +F+        +   S   LI GL     +D+A 
Sbjct: 737 NDFFLCP---LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAE 793

Query: 691 DVF 693
           D+F
Sbjct: 794 DLF 796



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 262/587 (44%), Gaps = 57/587 (9%)

Query: 64   ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
            A+ +AV+S L +     +  +   EL+   VS  +  + ++I    K    ++A+  F  
Sbjct: 459  AAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSD 518

Query: 124  MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
            M E  C PDV   N++++  ++      A  +++++ ++   P   T++ L++GL + GK
Sbjct: 519  MVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGK 578

Query: 184  TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
             +  + +L+EMT     PN  TY  V+  L +    + A  +   M + GC+PD  +YN 
Sbjct: 579  VKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNT 638

Query: 244  LLNGFCKLRRVDEAL------------------ALLRSFEKDGFVPRL------------ 273
            ++ G  K  R +EA                    +L SF K+G +               
Sbjct: 639  VMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAD 698

Query: 274  -----GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                  S+  L++G+      +++  +   +    I  +      +IR L +  K  +A 
Sbjct: 699  CNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 758

Query: 329  KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +L +  +  G+   T  YN+LI+G  D  L+D A  L  E+ +    P+  T+ +++  M
Sbjct: 759  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818

Query: 389  CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT- 446
             ++  +++  ++  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT 
Sbjct: 819  GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878

Query: 447  -----LFLRLSQGGNRVHDKASLQTMVEQYC---------------TAGLIHKAYKILMQ 486
                 L   L + G  V  +     M+E  C                AG      +I  +
Sbjct: 879  CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            + E G  PDI +Y  LI+  C  G +N  L  F++L   GL PD + Y  LI+GL + +R
Sbjct: 939  MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
             E+A  +F +M + G  P+   Y SL+    +  K S A  ++ + L
Sbjct: 999  IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELL 1045



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 170/741 (22%), Positives = 308/741 (41%), Gaps = 125/741 (16%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            +  S +AV+  L +    D      DE++   +S     +  LISG+ K    ++ALE F
Sbjct: 352  NIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELF 411

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
              M      P+ Y +   +N   +    L A+  Y  M     +P++   + +++ L++S
Sbjct: 412  NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARS 471

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            G+  +A ++  E+   G+ P+  TYT++I    + ++ADEA   F  M ++GC PD +A 
Sbjct: 472  GRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLAL 531

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            N+L++   K  + +EA  L    ++    P  G+Y+ L+ GL R  +  E      +M  
Sbjct: 532  NSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTH 591

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG--------- 352
                P+++ Y  ++  LS+ G+V  A+ +L  M E+G  PD   YN ++ G         
Sbjct: 592  SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEE 651

Query: 353  ----FCDL---------------------GLLDQA-RSLQVEIWKRDSLPNTHTFTILIC 386
                FC +                     GL+ +A  +++  I K D   +  +F  L+ 
Sbjct: 652  AFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLME 711

Query: 387  G-----------------------------------MCRNGMVDDAQKLFNKMEKAGCFP 411
            G                                   +C++    +A +LFNK +  G   
Sbjct: 712  GILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSL 771

Query: 412  SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              G +N+LI GL     ++ A  LF +M+         RL  G     D+ +   +++  
Sbjct: 772  KTGSYNSLIRGLVDENLIDIAEDLFTEMK---------RLGCG----PDEFTYNLILDAM 818

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
              +  I +  ++  ++   G     +TYN++I+G  K   +  A+ L+  L  +G  P  
Sbjct: 819  GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878

Query: 532  VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             TYG L++GL +  +  DA  +F +M + GC P+  +Y  L+                  
Sbjct: 879  CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNG---------------- 922

Query: 592  YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                I+G  +   +  E+ +++G         +  D K        YT+ +  LC  G++
Sbjct: 923  --HRIAGNTENVCQIFEKMVEQG---------INPDIK-------SYTVLIDTLCTAGRL 964

Query: 652  KEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
             + L+ F  L+E   +   P  +    LI GL K   ++ A+ +F    K G +  P + 
Sbjct: 965  NDGLSYFRQLLE---LGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIV--PNLY 1019

Query: 709  NYLLRSLLFSKDNKKVHAYHL 729
             Y    L   K  K   A  +
Sbjct: 1020 TYNSLILHLGKAGKASEAAQM 1040



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 259/596 (43%), Gaps = 73/596 (12%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    +  W+   +L+   +   +  +  L+SG  + G  ++ +    +M  
Sbjct: 532  NSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTH 591

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P++  YN VL+   +      A+ + Y M +  C P++ +++ ++ GL K  + E 
Sbjct: 592  SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEE 651

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK-MKDSGCSPDFVAYNALL 245
            A +M  +M ++ + P+  T   ++    +     EA     + +  + C+ D  ++++L+
Sbjct: 652  AFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLM 710

Query: 246  NG-----------------------------------FCKLRRVDEALALLRSFEKDGFV 270
             G                                    CK ++  EA  L   F+  G  
Sbjct: 711  EGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVS 770

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + GSY+ LI GL      D A   + +M      PD   Y +++  + ++ ++++ +++
Sbjct: 771  LKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRV 830

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             ++M  +G       YN +I G      L+QA  L   +      P   T+  L+ G+ +
Sbjct: 831  QAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLK 890

Query: 391  NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
             G + DA+ LFN+M + GC P+  ++N L++G   AG  E    +F KM E G NP    
Sbjct: 891  AGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINP---- 946

Query: 450  RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                      D  S   +++  CTAG ++       QL E G  PD+I YN LI+G  K 
Sbjct: 947  ----------DIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKS 996

Query: 510  GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
              I  A+ LF E++ KG+ P+  TY +LI  L +  +  +A +++ ++   G  P+   Y
Sbjct: 997  ERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTY 1056

Query: 570  KSLM--------------TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
             +L+               + C     SL  +L       ISG  DE++ +I E L
Sbjct: 1057 NALIRGYSVSGSTDNAYAAYDCVAVGVSLKTAL-------ISGLVDENLINIAEGL 1105



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 162/716 (22%), Positives = 307/716 (42%), Gaps = 27/716 (3%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRKRLRSFASN----SAVISMLLKPNGFDLYWQTLDELRS 91
           SV+M +   +      +W       R    N    +  I +L +   FD  +Q L ++  
Sbjct: 217 SVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMED 276

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
                      V+I      G    A + F KMK  D +PD   Y  +L+          
Sbjct: 277 SGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQS 336

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            + ++  MV      NIV+++ +++ L + G+ + A+ + DEM ++GI P +++Y  +IS
Sbjct: 337 VMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLIS 396

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  + +  D A  LF  M   G SP+   +   +N + K  +  +A+      +  G VP
Sbjct: 397 GFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVP 456

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + + + ++  L R+ R   A   + ++ +  + PD + Y +MI+  S+A K  +AM   
Sbjct: 457 DVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFF 516

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM E G VPD    N+LI      G  ++A  L  ++ +    P   T+  L+ G+ R 
Sbjct: 517 SDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGRE 576

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--- 447
           G V +   L  +M  +   P++  +N ++D L K GE+  A  + Y M E G  P L   
Sbjct: 577 GKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSY 636

Query: 448 ----------------FLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQ-LAE 489
                           F    Q    +  D A+L T++  +   GL+ +A   + + + +
Sbjct: 637 NTVMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILK 696

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +    D  +++SL+ G      +  +++  + +  +G+  +      LI  L +  +  +
Sbjct: 697 ADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALE 756

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A ++F +    G +     Y SL+          +A  L+ +  R   G D+ +   I +
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816

Query: 610 FLQKG-EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            + K   +E  ++   EM  K  +     Y   + GL +  ++++A++++  L+      
Sbjct: 817 AMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 876

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           TP +   L+ GL K G +  A ++F   L+ G      + N LL     + + + V
Sbjct: 877 TPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENV 932



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 182/378 (48%), Gaps = 30/378 (7%)

Query: 84   QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            Q  ++ +   VS+ +  +  LI G       + A + F +MK   C PD + YN +L+  
Sbjct: 759  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818

Query: 144  FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +       L V  EM +       VT++ +I+GL KS + E AI +   +   G  P  
Sbjct: 819  GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878

Query: 204  FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             TY  ++ GL +  +  +A  LF +M + GC P+   YN LLNG       +    +   
Sbjct: 879  CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938

Query: 264  FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              + G  P + SY+ LID L  A R ++  +++R++ E  +EPD+++Y ++I GL ++ +
Sbjct: 939  MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSER 998

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF-- 381
            +++A+ L ++M+++GIVP+ Y YN+LI      G   +A  +  E+  +   PN  T+  
Sbjct: 999  IEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNA 1058

Query: 382  ----------------------------TILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                                        T LI G+    +++ A+ LF +M++ GC P  
Sbjct: 1059 LIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQ 1118

Query: 414  GMFNALIDGLCKAGELEK 431
              +N ++D + K+  +E+
Sbjct: 1119 FTYNLILDAIGKSMRIEE 1136



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 196/392 (50%), Gaps = 20/392 (5%)

Query: 170  TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            +++ LI GL      ++A  +  EM + G  P++FTY +++  + +  R +E  R+  +M
Sbjct: 775  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEM 834

Query: 230  KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
               G    +V YN +++G  K +R+++A+ L  +   +GF P   +Y  L+DGL +A + 
Sbjct: 835  HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKM 894

Query: 290  DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
             +A   + +M E   +P+  +Y +++ G   AG  ++  ++   M E+GI PD   Y  L
Sbjct: 895  VDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVL 954

Query: 350  IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
            I   C  G L+   S   ++ +    P+   + +LI G+ ++  +++A  LFN+M+K G 
Sbjct: 955  IDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014

Query: 410  FPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P++  +N+LI  L KAG+  +A  ++ ++ I G  P +F              +   ++
Sbjct: 1015 VPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVF--------------TYNALI 1060

Query: 469  EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              Y  +G    AY     +A   +L       +LI+G      IN A  LF E++ +G  
Sbjct: 1061 RGYSVSGSTDNAYAAYDCVAVGVSLK-----TALISGLVDENLINIAEGLFAEMKRRGCG 1115

Query: 529  PDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            PD  TY  +++ + +  R E+  ++  ++ ++
Sbjct: 1116 PDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 193/412 (46%), Gaps = 23/412 (5%)

Query: 115  EKALES---FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
            +KALE+   F K K          YN+++     + L  +A  ++ EM +L C P+  T+
Sbjct: 752  KKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTY 811

Query: 172  SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
            +L+++ + KS + E  +++  EM ++G      TY  +ISGL +  R ++A  L+  +  
Sbjct: 812  NLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS 871

Query: 232  SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             G SP    Y  LL+G  K  ++ +A  L     + G  P    Y+ L++G   A   + 
Sbjct: 872  EGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN 931

Query: 292  AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
                + KM E+ I PD+  Y V+I  L  AG++ D +     + E G+ PD   YN LI 
Sbjct: 932  VCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLID 991

Query: 352  GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            G      +++A  L  E+ K+  +PN +T+  LI  + + G   +A +++ ++   G  P
Sbjct: 992  GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051

Query: 412  SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT-MVEQ 470
            +V  +NALI G   +G  + A   +  + +G                    SL+T ++  
Sbjct: 1052 NVFTYNALIRGYSVSGSTDNAYAAYDCVAVG-------------------VSLKTALISG 1092

Query: 471  YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
                 LI+ A  +  ++   G  PD  TYN +++   K   I   LK+ +E+
Sbjct: 1093 LVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            + VLI      G     L  F ++ E   +PD+ IYN +++   + +    A+ ++ EM 
Sbjct: 951  YTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMK 1010

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY-------------- 206
            K   +PN+ T++ LI  L K+GK   A +M +E+  +G  PN FTY              
Sbjct: 1011 KKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070

Query: 207  ----------------TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
                            T +ISGL   N  + A  LF +MK  GC PD   YN +L+   K
Sbjct: 1071 NAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGK 1130

Query: 251  LRRVDEALALLRSFEKD 267
              R++E L +     +D
Sbjct: 1131 SMRIEEMLKVQEEIAED 1147



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 147/351 (41%), Gaps = 16/351 (4%)

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           M  +G V D  ++F+ M+K     +VG F  +  G+   G L  A            P  
Sbjct: 118 MRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSA------------PVA 165

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              + + G  + +  +   ++     +G   +A ++   + E G  P + TY+ L+  F 
Sbjct: 166 LPVMREAGMSL-NGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFG 224

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K  +++  L L  E++ +G++P+  +Y   I  L +  R ++A++I G+M  +GC P   
Sbjct: 225 KKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVV 284

Query: 568 VYKSLMTWSCRRRKFSLAFSL-WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
            +  ++   C   + S A  + W     D        +  +++    G+ ++ ++    M
Sbjct: 285 THTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAM 344

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
                +  +  YT  +  LCQ G++ EAL +F  + E        S   LI G  K    
Sbjct: 345 VADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMF 404

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           D A+++F +   N     P    ++L    + K  + + A      MKS G
Sbjct: 405 DRALELFNHM--NACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 453


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/607 (27%), Positives = 286/607 (47%), Gaps = 21/607 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LIS   ++G  E A E F KM E  C+P+ +    ++    R  L    + +  EM
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                LPN V ++ +I+ L   G+T  A K++++M + G+ P+  T+   I+ LC+  + 
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 220 DEAYRLFLKMK---DSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            EA R+F  M+   + G   P+ V YN +L GFC     +EA A+  S  K+     L S
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRS 333

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+  + GL R+ +  EA+    +M E+ I+P++  Y +++ GL + G   DA  +L  MR
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E G+ PDT  Y+ L+ G+C  G + +A  +  E+ +    PN +T  IL+  + + G   
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGKNPTLFL 449
           +A+ L   M + G        N +I+GLCKAG L+KA  +   M       +G     F+
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 450 RL----SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            L    + G   + D  +  T++   C  G + +A K L+++      PD + +++ I  
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG---QMPQNGC 562
           +CK G ++ A ++ KE++ KG      TY +LI GL     E   F I+G   +M + G 
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL---GSENQIFEIYGLMDEMKERGI 630

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P+   Y ++++      K   A  L  + L+     +  + + +     K     A Q 
Sbjct: 631 FPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQE 690

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L E+   L   + + Y+     L   G+  +A  +F   ++    +       LI  LCK
Sbjct: 691 LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 683 RGYLDLA 689
            G LD A
Sbjct: 751 DGKLDDA 757



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 179/415 (43%), Gaps = 65/415 (15%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+   N+      + +L+ G  K G    A    G M+E    PD   Y+ +L+   R
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 146 KQLFLLALAVYYEMVKLNCLPNI-----------------------------------VT 170
           +   L A  V  EM+++ C PN+                                   VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRG-----------------------ILPNKFTYT 207
            + +INGL K+G  + AI+++  M  RG                        LP+  TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I GLC++ R DEA +  L+M     SPD + ++  +  +CK  ++  A  +L+  EK 
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G    L +Y+ LI GL    +  E Y    +M E  I P+V  Y  +I  LSE GK+KDA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGF---CDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             LL +M ++GI P+ Y +  LI  F   CD G   +   + + +        +  F  L
Sbjct: 654 TCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNEL 713

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           + G    G    A++LF             ++  LI+ LCK G+L+ A+ + +KM
Sbjct: 714 LAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 240/559 (42%), Gaps = 79/559 (14%)

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFV---PRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           +L+     L  ++ A++  RS  +D F    P +  Y+ L     +  R D     Y+ M
Sbjct: 86  SLVRTLADLGLLENAISQFRSL-RDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDM 144

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
              K++P    + ++I  L E G +++A ++   M E+G  P+ +    L++G+C  GL 
Sbjct: 145 AVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLH 204

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
                L  E+    +LPN   +  +I  +C  G   +A+KL  KM + G  P +  FN  
Sbjct: 205 SHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCR 264

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I  LCK+G++ +A+ +F  M+I +         + G    +  +   M+E +C+ G+  +
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDE---------EMGLPKPNTVTYNLMLEGFCSEGMFEE 315

Query: 480 A----------------------------------YKILMQLAESGNLPDIITYNSLING 505
           A                                  + IL ++AE    P++ +YN L++G
Sbjct: 316 ARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK G  + A  +   ++  G+ PD+VTY TL++G  R  +  +A  +  +M Q GC P+
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS-GRDDESMKS-IEEFLQKGEVENAIQGL 623
                 L+    +  + S A  L LQ + +   G D+ +  + I    + G ++ AI+ +
Sbjct: 436 MYTCNILLHSLWKEGRASEAEDL-LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494

Query: 624 LEM-------------------DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSV 660
             M                   D + N  +  P    Y   + GLC+ G+V EA      
Sbjct: 495 SGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLE 554

Query: 661 LVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           ++  K  ++P S +    I+  CK+G L  A  V     K G     R  N L++ L   
Sbjct: 555 MIGKK--LSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL--G 610

Query: 719 KDNKKVHAYHLLCRMKSVG 737
            +N+    Y L+  MK  G
Sbjct: 611 SENQIFEIYGLMDEMKERG 629



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 179/407 (43%), Gaps = 35/407 (8%)

Query: 348 ALIKGFCDLGLLDQA----RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           +L++   DLGLL+ A    RSL+ + +  D  P +    +  C + +   VD    L+  
Sbjct: 86  SLVRTLADLGLLENAISQFRSLR-DRFPHDPPPISFYNLLFRCSL-KESRVDCVIWLYKD 143

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M  A   P    FN LI  LC+ G LE A  +F KM E G  P  F              
Sbjct: 144 MAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF-------------- 189

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           SL  +V  YC AGL      +L ++  SG LP+ + YN++I+  C  G    A KL +++
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG--QMPQNGCTPSP--AVYKSLMTWSCR 578
           +  GL PD VT+   I  L +  +  +A RIF   Q+ +    P P    Y  ++   C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQ 634
              F  A +++      +   +  S++S   ++    + G++  A   L EM  K     
Sbjct: 310 EGMFEEARAIF----DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           L  Y I + GLC+ G   +A +I  ++ E        +   L+HG C+RG +  A  V  
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
             ++ G       CN LL SL   K+ +   A  LL  M   GY LD
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLW--KEGRASEAEDLLQMMNERGYGLD 470



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 37/313 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D   + L E+    +S  S +F   I  Y K G    A     +M++
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592

Query: 127 FDCQPDVYIYNAVLN-IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
             C   +  YN+++  +    Q+F +   +  EM +    PN+ T++ +I+ LS+ GK +
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEI-YGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGL---CQINRADE--------------------- 221
            A  +LDEM Q+GI PN +T+ I+I      C    A E                     
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFN 711

Query: 222 ----------AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                     A  LF    D   +     Y  L+   CK  ++D+A  +L       +  
Sbjct: 712 ELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSF 771

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY-GVMIRGLSEAGKVKDAMKL 330
              S+  +ID L +      A  +  +M E   E D   +    IRG        D  K+
Sbjct: 772 DPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDESDWQKI 831

Query: 331 LSDMRERGIVPDT 343
           +      GI   T
Sbjct: 832 VHRNDGSGIAQKT 844


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 164/609 (26%), Positives = 283/609 (46%), Gaps = 89/609 (14%)

Query: 138 AVLNIAFRKQLFLL--ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           A  +I F K++  L  A+++++ MV++  LP+++ FS L        KT + +K      
Sbjct: 30  AKAHINFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLF-------KTMINMK------ 76

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                     Y+ V+S             LF +M+  G        N + N +C   R+D
Sbjct: 77  ---------HYSAVVS-------------LFREMRILGIPISDSILNIVTNSYCLRHRID 114

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-EPDVVLYGVM 314
            A ++L  + K G    + +++ L+ GLF   +  +A   ++K+  EKI EP+ V+YG +
Sbjct: 115 CAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTV 174

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + GLS+ G  +  + LL  M +    PD   Y+ +I   C    LD A +L  E+ +++ 
Sbjct: 175 MNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNI 234

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN- 433
            PN  T+  LI G+C+ G  +  + L ++M      P+V  F+ LIDGLCK G++E A+ 
Sbjct: 235 PPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADE 294

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           ++ + +E G  P              D  +   +++ YC  G + +A ++   L + G  
Sbjct: 295 VMRHMIEKGVEP--------------DIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+I +Y+ LING+CK  N+  A++LF E+  KGL+PD+VTY T+++GL  V R  DA +I
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F +M + G TP   ++ +L+                                    + + 
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFG----------------------------------YFKY 426

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G VE A+    +++    D  ++ YT+ + GLC++ +V+EA  IF  L     I    + 
Sbjct: 427 GLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTY 486

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             +I G C+ G  D    +      NG        N +++   F + NK       +  M
Sbjct: 487 NVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQG--FFRSNKISEIVSFMKEM 544

Query: 734 KSVGYDLDA 742
              G+  DA
Sbjct: 545 AGRGFSFDA 553



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 223/432 (51%), Gaps = 16/432 (3%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-CLPNIVTFSLLINGLSKSGKTEVAIKM 190
           +V  +N +L   F +     A+ ++ ++V+   C PN V +  ++NGLSK G TE  + +
Sbjct: 131 NVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSL 190

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M Q    P+  TY+IVI  LC+    D A  L  +MK     P+   YN+L++G CK
Sbjct: 191 LRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCK 250

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           L + ++   LL         P + ++S LIDGL +  + ++A    R M E+ +EPD++ 
Sbjct: 251 LGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIIT 310

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  ++ G    G+V  A ++ + +R++GI P+ + Y+ LI G+C    L +A  L  EI 
Sbjct: 311 YSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEIS 370

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           ++   P+T T++ ++ G+   G + DA+K+F++M + G  P + + + L+ G  K G +E
Sbjct: 371 QKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVE 430

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV-EQYCTAGLIHKAYKILMQLAE 489
           +A LLF K+E               NR     S  T+V    C    + +A+ I  +L  
Sbjct: 431 EAMLLFSKLE--------------RNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPS 476

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G +PD+ TYN +I GFC+ G  +    + ++++  G   +++TY  ++ G  R ++  +
Sbjct: 477 IGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISE 536

Query: 550 AFRIFGQMPQNG 561
                 +M   G
Sbjct: 537 IVSFMKEMAGRG 548



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 48/443 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +++G  K G  EK L     M++ + +PDV  Y+ V++   +      A+ +  EM
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + N  PNI T++ LI+GL K G+ E    +L EM    I PN  T++I+I GLC+  + 
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  +   M + G  PD + Y+A+++G+C   +VD A  +       G  P + SYS L
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  + K   +A   + ++ ++ ++PD V Y  ++ GL E G++ DA K+  +M   G 
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   ++ L+ G+   GL+++A  L  ++ +     N   +T++I G+C+N  V +A  
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F K+   G  P V  +N +I G C+ G  ++   +  KME                   
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKME------------------- 510

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                                        ++G   + ITYN ++ GF +   I+  +   
Sbjct: 511 -----------------------------DNGCPANNITYNVIMQGFFRSNKISEIVSFM 541

Query: 520 KELQLKGLRPDSVTYGTLINGLQ 542
           KE+  +G   D+ T G LIN L+
Sbjct: 542 KEMAGRGFSFDATTTGVLINVLK 564



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 236/504 (46%), Gaps = 33/504 (6%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC----LP 166
           V D  K  ++   MK +     ++    +L I     +  +    Y    +++C    LP
Sbjct: 62  VIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLP 121

Query: 167 ---------NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQI 216
                    N+VTF+ L+ GL    K   A+ +  ++ +  I  PN+  Y  V++GL + 
Sbjct: 122 IYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKR 181

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              ++   L   M+     PD   Y+ +++  CK   +D A+ LL   ++    P + +Y
Sbjct: 182 GHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTY 241

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LIDGL +  ++++      +M    I P+V  + ++I GL + GKV+DA +++  M E
Sbjct: 242 NSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIE 301

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +G+ PD   Y+A++ G+C  G +D+AR +   +  +   PN  +++ILI G C+   +  
Sbjct: 302 KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAK 361

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A +LF ++ + G  P    ++ ++ GL + G +  A  +F +M  +G  P + L      
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLH----- 416

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T++  Y   GL+ +A  +  +L  +    +I  Y  +ING CK   +  A
Sbjct: 417 ---------STLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREA 467

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             +F++L   GL PD  TY  +I G  R    ++   I  +M  NGC  +   Y  +M  
Sbjct: 468 HAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQG 527

Query: 576 SCRRRKFSLAFSLWLQYLRDISGR 599
             R  K S   S    ++++++GR
Sbjct: 528 FFRSNKISEIVS----FMKEMAGR 547



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 181/351 (51%), Gaps = 3/351 (0%)

Query: 84  QTLDELR---SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           +TL  LR    GN       + ++I    K  + + A+    +MK+ +  P+++ YN+++
Sbjct: 186 KTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLI 245

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   +   +     +  EMV LN  PN+ TFS+LI+GL K GK E A +++  M ++G+ 
Sbjct: 246 DGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVE 305

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+  TY+ ++ G C   + D A R+F  ++D G  P+  +Y+ L+NG+CK + + +A+ L
Sbjct: 306 PDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQL 365

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                + G  P   +YS ++ GL    R  +A   + +M      PD+ L+  ++ G  +
Sbjct: 366 FGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFK 425

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G V++AM L S +       +   Y  +I G C    + +A ++  ++     +P+  T
Sbjct: 426 YGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRT 485

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           + ++I G CR G+ D+ + +  KME  GC  +   +N ++ G  ++ ++ +
Sbjct: 486 YNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISE 536



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 161/334 (48%), Gaps = 1/334 (0%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           F  NS +I  L K   ++     L E+ + N++     F +LI G  K G  E A E   
Sbjct: 239 FTYNS-LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMR 297

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M E   +PD+  Y+A+++    +     A  V+  +      PNI ++S+LING  K  
Sbjct: 298 HMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKK 357

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A+++  E++Q+G+ P+  TY+ ++ GL ++ R  +A ++F +M   G +PD   ++
Sbjct: 358 NLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHS 417

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            LL G+ K   V+EA+ L    E++     +  Y+ +I+GL +  R  EA+A + K+   
Sbjct: 418 TLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSI 477

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            + PDV  Y VMI G    G   +   +L  M + G   +   YN +++GF     + + 
Sbjct: 478 GLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEI 537

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            S   E+  R    +  T  +LI  +  N  + D
Sbjct: 538 VSFMKEMAGRGFSFDATTTGVLINVLKENPSIVD 571


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 248/501 (49%), Gaps = 31/501 (6%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           KT + +  F+  I A  R  + ++   + +I  + K    +      +E++   +   + 
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTY---NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G+ KVG  +  +  F +MK+  C+PDV  YNA++N   +     + L  Y EM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+V++S L++   K G  + AIK   +M + G++PN++TYT +I   C+I   
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+RL  +M   G   + V Y AL++G C   R+ EA  L    +  G +P L SY+ L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +AK  D A     ++    I+PD++LYG  I GL    K++ A  ++++M+E GI
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538

Query: 340 VPDTYCYNALIKGFCDLG-------LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
             ++  Y  L+  +   G       LLD+ + L +E+          TF +LI G+C+N 
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV-------TVVTFCVLIDGLCKNK 591

Query: 393 MVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           +V  A   FN++    G   +  +F A+IDGLCK  ++E A             TLF ++
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT------------TLFEQM 639

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            Q G  V D+ +  ++++     G + +A  +  ++AE G   D++ Y SL+ G      
Sbjct: 640 VQKG-LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 698

Query: 512 INGALKLFKELQLKGLRPDSV 532
           +  A    +E+  +G+ PD V
Sbjct: 699 LQKARSFLEEMIGEGIHPDEV 719



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 167/690 (24%), Positives = 318/690 (46%), Gaps = 46/690 (6%)

Query: 19  EPALEPLLPF-LSKTTVTSVIMKTK-NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP 76
           +P LE L    L+   V  V+++ K +P++ F+FF W+  R   +    +  +++ +L  
Sbjct: 95  DPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFC 154

Query: 77  NGFDLYWQTLDELRSGNVSVVS-DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
               +Y+     L+   +S    DVF VL S                      C P   +
Sbjct: 155 A--RMYYDANSVLKEMVLSKADCDVFDVLWSTRNV------------------CVPGFGV 194

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           ++A+ ++     +   A+  + +M +    P   + + L++  +K GKT+   +   +M 
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G  P  FTY I+I  +C+    + A  LF +MK  G  PD V YN++++GF K+ R+D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           + +      +     P + +Y+ LI+   +  +      +YR+M    ++P+VV Y  ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
               + G ++ A+K   DMR  G+VP+ Y Y +LI   C +G L  A  L  E+ +    
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            N  T+T LI G+C    + +A++LF KM+ AG  P++  +NALI G  KA  +++A  L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
             +++  G  P L L                T +   C+   I  A  ++ ++ E G   
Sbjct: 495 LNELKGRGIKPDLLL--------------YGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           + + Y +L++ + K GN    L L  E++   +    VT+  LI+GL +      A   F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600

Query: 555 GQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQ 612
            ++  + G   + A++ +++   C+  +   A +L+ Q ++     D  +  S+ +   +
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660

Query: 613 KGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           +G V  A+     + E+  KL+   L  YT  + GL    Q+++A +    ++       
Sbjct: 661 QGNVLEALALRDKMAEIGMKLD---LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
              C+ ++    + G +D A+++  Y +K+
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMKH 747



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 136/283 (48%), Gaps = 9/283 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G+ K  + ++ALE   ++K    +PD+ +Y   +      +    A  V  EM +  
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              N + ++ L++   KSG     + +LDEM +  I     T+ ++I GLC+     +A 
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 224 RLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             F ++  D G   +   + A+++G CK  +V+ A  L     + G VP   +Y+ L+DG
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            F+     EA A   KM E  ++ D++ Y  ++ GLS   +++ A   L +M   GI PD
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKR--------DSLPN 377
                +++K   +LG +D+A  LQ  + K         ++LPN
Sbjct: 718 EVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPN 760


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/607 (27%), Positives = 286/607 (47%), Gaps = 21/607 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LIS   ++G  E A E F KM E  C+P+ +    ++    R  L    + +  EM
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                LPN V ++ +I+ L   G+T  A K++++M + G+ P+  T+   I+ LC+  + 
Sbjct: 215 RSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQI 274

Query: 220 DEAYRLFLKMK---DSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            EA R+F  M+   + G   P+ V YN +L GFC     +EA A+  S  K+     L S
Sbjct: 275 LEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRS 333

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+  + GL R+ +  EA+    +M E+ I+P++  Y +++ GL + G   DA  +L  MR
Sbjct: 334 YNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMR 393

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E G+ PDT  Y+ L+ G+C  G + +A  +  E+ +    PN +T  IL+  + + G   
Sbjct: 394 ESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRAS 453

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGKNPTLFL 449
           +A+ L   M + G        N +I+GLCKAG L+KA  +   M       +G     F+
Sbjct: 454 EAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFI 513

Query: 450 RL----SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
            L    + G   + D  +  T++   C  G + +A K L+++      PD + +++ I  
Sbjct: 514 DLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYN 573

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG---QMPQNGC 562
           +CK G ++ A ++ KE++ KG      TY +LI GL     E   F I+G   +M + G 
Sbjct: 574 YCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL---GSENQIFEIYGLMDEMKERGI 630

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P+   Y ++++      K   A  L  + L+     +  + + +     K     A Q 
Sbjct: 631 FPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQE 690

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L E+   L   + + Y+     L   G+  +A  +F   ++    +       LI  LCK
Sbjct: 691 LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCK 750

Query: 683 RGYLDLA 689
            G LD A
Sbjct: 751 DGKLDDA 757



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 179/415 (43%), Gaps = 65/415 (15%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+   N+      + +L+ G  K G    A    G M+E    PD   Y+ +L+   R
Sbjct: 354 LNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCR 413

Query: 146 KQLFLLALAVYYEMVKLNCLPNI-----------------------------------VT 170
           +   L A  V  EM+++ C PN+                                   VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRG-----------------------ILPNKFTYT 207
            + +INGL K+G  + AI+++  M  RG                        LP+  TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I GLC++ R DEA +  L+M     SPD + ++  +  +CK  ++  A  +L+  EK 
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G    L +Y+ LI GL    +  E Y    +M E  I P+V  Y  +I  LSE GK+KDA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGF---CDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             LL +M ++GI P+ Y +  LI  F   CD G   +   + + +        +  F  L
Sbjct: 654 TCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNEL 713

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           + G    G    A++LF             ++  LI+ LCK G+L+ A+ + +KM
Sbjct: 714 LAG----GETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 240/559 (42%), Gaps = 79/559 (14%)

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFV---PRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           +L+     L  ++ A++  RS  +D F    P +  Y+ L     +  R D     Y+ M
Sbjct: 86  SLVRTLADLGLLENAISQFRSL-RDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDM 144

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
              +++P    + ++I  L E G +++A ++   M E+G  P+ +    L++G+C  GL 
Sbjct: 145 AVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLH 204

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
                L  E+    +LPN   +  +I  +C  G   +A+KL  KM + G  P +  FN  
Sbjct: 205 SHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCR 264

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I  LCK+G++ +A+ +F  M+I +         + G    +  +   M+E +C+ G+  +
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDE---------EMGLPKPNTVTYNLMLEGFCSEGMFEE 315

Query: 480 A----------------------------------YKILMQLAESGNLPDIITYNSLING 505
           A                                  + IL ++AE    P++ +YN L++G
Sbjct: 316 ARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK G  + A  +   ++  G+ PD+VTY TL++G  R  +  +A  +  +M Q GC P+
Sbjct: 376 LCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPN 435

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS-GRDDESMKS-IEEFLQKGEVENAIQGL 623
                 L+    +  + S A  L LQ + +   G D+ +  + I    + G ++ AI+ +
Sbjct: 436 MYTCNILLHSLWKEGRASEAEDL-LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494

Query: 624 LEM-------------------DFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSV 660
             M                   D + N  +  P    Y   + GLC+ G+V EA      
Sbjct: 495 SGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLE 554

Query: 661 LVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
           ++  K  ++P S +    I+  CK+G L  A  V     K G     R  N L++ L   
Sbjct: 555 MIGKK--LSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGL--G 610

Query: 719 KDNKKVHAYHLLCRMKSVG 737
            +N+    Y L+  MK  G
Sbjct: 611 SENQIFEIYGLMDEMKERG 629



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 179/407 (43%), Gaps = 35/407 (8%)

Query: 348 ALIKGFCDLGLLDQA----RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           +L++   DLGLL+ A    RSL+ + +  D  P +    +  C + +   VD    L+  
Sbjct: 86  SLVRTLADLGLLENAISQFRSLR-DRFPHDPPPISFYNLLFRCSL-KESRVDCVIWLYKD 143

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M  A   P    FN LI  LC+ G LE A  +F KM E G  P  F              
Sbjct: 144 MAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEF-------------- 189

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           SL  +V  YC AGL      +L ++  SG LP+ + YN++I+  C  G    A KL +++
Sbjct: 190 SLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKM 249

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG--QMPQNGCTPSP--AVYKSLMTWSCR 578
           +  GL PD VT+   I  L +  +  +A RIF   Q+ +    P P    Y  ++   C 
Sbjct: 250 REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCS 309

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQ 634
              F  A +++      +   +  S++S   ++    + G++  A   L EM  K     
Sbjct: 310 EGMFEEARAIF----DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPN 365

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           L  Y I + GLC+ G   +A +I  ++ E        +   L+HG C+RG +  A  V  
Sbjct: 366 LYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLR 425

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
             ++ G       CN LL SL   K+ +   A  LL  M   GY LD
Sbjct: 426 EMIQVGCFPNMYTCNILLHSLW--KEGRASEAEDLLQMMNERGYGLD 470



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 119/313 (38%), Gaps = 37/313 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D   + L E+    +S  S +F   I  Y K G    A     +M++
Sbjct: 533 ATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEK 592

Query: 127 FDCQPDVYIYNAVLN-IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
             C   +  YN+++  +    Q+F +   +  EM +    PN+ T++ +I+ LS+ GK +
Sbjct: 593 KGCNKSLRTYNSLIQGLGSENQIFEI-YGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGL---CQINRADE--------------------- 221
            A  +LDEM Q+GI PN +T+ I+I      C    A E                     
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFN 711

Query: 222 ----------AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                     A  LF    D   +     Y  L+   CK  ++D+A  +L       +  
Sbjct: 712 ELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSF 771

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY-GVMIRGLSEAGKVKDAMKL 330
              S+  +ID L +      A  +  +M E   E D   +    IRG        D  K+
Sbjct: 772 DPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDESDWQKI 831

Query: 331 LSDMRERGIVPDT 343
           +      GI   T
Sbjct: 832 VHRNDGSGIAQKT 844


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 262/582 (45%), Gaps = 58/582 (9%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN- 66
           +L I       E ALE L+  +    V  V+       V  +FF WAAK++  +   S  
Sbjct: 67  ILKIFKWGPDAERALEVLMLRVDHWLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTY 126

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV----FFVLISGYYKVGDCEKALESFG 122
            A+I  L     +   W+ + E+    + VV+ +       ++     +G   KA+  F 
Sbjct: 127 MALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIG---KAITIFY 183

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKS 181
           ++K   CQP    YN+++ +   +  +     +Y EM  + +C P+ VT+S LI+   K 
Sbjct: 184 QIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKL 243

Query: 182 GKTEVAIKMLDEMTQRGILPNK-----------------------------------FTY 206
           G+ + AI++L+EM + G+ P                                     FTY
Sbjct: 244 GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY 303

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T +I GL +  R DEAY  + +M+   C PD V  N ++N   K  R+D+ L L      
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGV 363

Query: 267 DGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
              +P + +Y+ +I  LF +K R  E ++W+ +M    I P    Y ++I G  +  +++
Sbjct: 364 SHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIE 423

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            AM LL +M E+G  P    Y +LI         D A  L  E+ +     +   + ++I
Sbjct: 424 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 483

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             + + G +DDA  LF++M K GC P+V  +NAL+ GL +A  L++A     KM      
Sbjct: 484 KHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM------ 537

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  Q    + D  S   ++      G  H+A ++L  +  S   PD ++YN++++ 
Sbjct: 538 -------QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSA 590

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
               G    A +L KE+   G   D +TY +++  + +VD+E
Sbjct: 591 LSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQE 632



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 208/492 (42%), Gaps = 23/492 (4%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           R  N   V D  F+ I   +K G D E+ALE    M   D      +    + +  + Q 
Sbjct: 52  RYTNSVRVLDERFIRILKIFKWGPDAERALEVL--MLRVDHWLVREVMKTDVGVNVKMQF 109

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYT 207
           F  A        K N   +  T+  LI+ L    +     KM+ EM +  I +      +
Sbjct: 110 FRWAAK------KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELS 163

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI  L       +A  +F ++K   C P   AYN+++       + ++   L      +
Sbjct: 164 QVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNE 223

Query: 268 GFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           G   P   +YS LI    +  R D A     +M E  ++P   +Y ++I    +   V  
Sbjct: 224 GHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHG 283

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+ L  +MR     PD + Y  LI+G    G +D+A     E+ + D  P+T     +I 
Sbjct: 284 ALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMIN 343

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
            + + G +DD  KLF +M  + C P+V  +N +I  L ++           K  + +  +
Sbjct: 344 FLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES-----------KSRVSEVFS 392

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            F R+ +G        +   +++ +C    I KA  +L ++ E G  P    Y SLI+  
Sbjct: 393 WFERM-KGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 451

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K    + A +LF+EL+       +  Y  +I  L +  R +DA  +F +M + GCTP+ 
Sbjct: 452 GKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNV 511

Query: 567 AVYKSLMTWSCR 578
             Y +LM+   R
Sbjct: 512 YAYNALMSGLAR 523



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 50/343 (14%)

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
           M+  A  +F +++   C P+   +N++I  L   G+ EK + L+ +M            S
Sbjct: 174 MIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEM------------S 221

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             G+   D  +   ++  +C  G    A ++L ++ E+G  P    Y  +I+ F K+ N+
Sbjct: 222 NEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           +GAL LF+E++    RPD  TY  LI GL +  R ++A+  + +M +  C P   V  ++
Sbjct: 282 HGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNM 341

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA------IQGLLEM 626
           + +  +                  +GR D+ +K  EE      + N       I+ L E 
Sbjct: 342 INFLGK------------------AGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFES 383

Query: 627 DFKLNDF----------QLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
             ++++            ++P    Y+I + G C+  ++++A+ +   + E      P +
Sbjct: 384 KSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAA 443

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
              LI  L K    DLA ++F    +N      RV   +++ L
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHL 486


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 248/501 (49%), Gaps = 31/501 (6%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           KT + +  F+  I A  R  + ++   + +I  + K    +      +E++   +   + 
Sbjct: 110 KTDDVKRFFKDMIGAGARPTVFTY---NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 166

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I G+ KVG  +  +  F +MK+  C+PDV  YNA++N   +     + L  Y EM
Sbjct: 167 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 226

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+V++S L++   K G  + AIK   +M + G++PN++TYT +I   C+I   
Sbjct: 227 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 286

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A+RL  +M   G   + V Y AL++G C   R+ EA  L    +  G +P L SY+ L
Sbjct: 287 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +AK  D A     ++    I+PD++LYG  I GL    K++ A  ++++M+E GI
Sbjct: 347 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406

Query: 340 VPDTYCYNALIKGFCDLG-------LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
             ++  Y  L+  +   G       LLD+ + L +E+          TF +LI G+C+N 
Sbjct: 407 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV-------TVVTFCVLIDGLCKNK 459

Query: 393 MVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           +V  A   FN++    G   +  +F A+IDGLCK  ++E A             TLF ++
Sbjct: 460 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT------------TLFEQM 507

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
            Q G  V D+ +  ++++     G + +A  +  ++AE G   D++ Y SL+ G      
Sbjct: 508 VQKG-LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQ 566

Query: 512 INGALKLFKELQLKGLRPDSV 532
           +  A    +E+  +G+ PD V
Sbjct: 567 LQKARSFLEEMIGEGIHPDEV 587



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/577 (24%), Positives = 274/577 (47%), Gaps = 23/577 (3%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P   +++A+ ++     +   A+  + +M +    P   + + L++  +K GKT+   
Sbjct: 56  CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 115

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +   +M   G  P  FTY I+I  +C+    + A  LF +MK  G  PD V YN++++GF
Sbjct: 116 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K+ R+D+ +      +     P + +Y+ LI+   +  +      +YR+M    ++P+V
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++    + G ++ A+K   DMR  G+VP+ Y Y +LI   C +G L  A  L  E
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +     N  T+T LI G+C    + +A++LF KM+ AG  P++  +NALI G  KA  
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355

Query: 429 LEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +++A  L  +++  G  P L L                T +   C+   I  A  ++ ++
Sbjct: 356 MDRALELLNELKGRGIKPDLLL--------------YGTFIWGLCSLEKIEAAKVVMNEM 401

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G   + + Y +L++ + K GN    L L  E++   +    VT+  LI+GL +    
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 461

Query: 548 EDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             A   F ++  + G   + A++ +++   C+  +   A +L+ Q ++     D  +  S
Sbjct: 462 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 521

Query: 607 I-EEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           + +   ++G V  A+     + E+  KL+   L  YT  + GL    Q+++A +    ++
Sbjct: 522 LMDGNFKQGNVLEALALRDKMAEIGMKLD---LLAYTSLVWGLSHCNQLQKARSFLEEMI 578

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
                     C+ ++    + G +D A+++  Y +K+
Sbjct: 579 GEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 615



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 249/572 (43%), Gaps = 66/572 (11%)

Query: 63  FASNSAVISMLLKP---NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           + +NS +  M+L     + FD+ W T +    G   V   +F VLI     +G  E+A++
Sbjct: 27  YDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG-FGVFDALFSVLID----LGMLEEAIQ 81

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F KMK F   P     N +L+   +          + +M+     P + T++++I+ + 
Sbjct: 82  CFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMC 141

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K G  E A  + +EM  RG++P+  TY  +I G  ++ R D+    F +MKD  C PD +
Sbjct: 142 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 201

Query: 240 AYNALL-----------------------------------NGFCKLRRVDEALALLRSF 264
            YNAL+                                   + FCK   + +A+      
Sbjct: 202 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 261

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            + G VP   +Y+ LID   +     +A+    +M +  +E +VV Y  +I GL +A ++
Sbjct: 262 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 321

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           K+A +L   M   G++P+   YNALI GF     +D+A  L  E+  R   P+   +   
Sbjct: 322 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---- 440
           I G+C    ++ A+ + N+M++ G   +  ++  L+D   K+G   +   L  +M+    
Sbjct: 382 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441

Query: 441 -------------------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
                              + K    F R+S       + A    M++  C    +  A 
Sbjct: 442 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +  Q+ + G +PD   Y SL++G  K GN+  AL L  ++   G++ D + Y +L+ GL
Sbjct: 502 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
              ++ + A     +M   G  P   +  S++
Sbjct: 562 SHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 593



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 9/294 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G+ K  + ++ALE   ++K    +PD+ +Y   +      +    A  V  EM 
Sbjct: 343 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     N + ++ L++   KSG     + +LDEM +  I     T+ ++I GLC+     
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 462

Query: 221 EAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +A   F ++  D G   +   + A+++G CK  +V+ A  L     + G VP   +Y+ L
Sbjct: 463 KAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSL 522

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG F+     EA A   KM E  ++ D++ Y  ++ GLS   +++ A   L +M   GI
Sbjct: 523 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 582

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR--------DSLPNTHTFTILI 385
            PD     +++K   +LG +D+A  LQ  + K         ++LPN ++   L+
Sbjct: 583 HPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSDQNLV 636



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F  +I G  K    E A   F +M +    PD   Y ++++  F++   L ALA+  +M
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++    +++ ++ L+ GLS   + + A   L+EM   GI P++     V+    ++   
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 602

Query: 220 DEAYRL--FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK-----DGFVPR 272
           DEA  L  +L MK    + D    NAL N +      D+ L   R  E+         P+
Sbjct: 603 DEAVELQSYL-MKHQLLTSD--NDNALPNIYS-----DQNLVSSREHEEQETRISNLQPK 654

Query: 273 --LGSYSCLIDGLFRAKRYDEAYAWYRK 298
             LG Y   I  L R +     Y  +RK
Sbjct: 655 LLLGIYKLAIHRLIRGESLSMGYIVHRK 682


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 259/573 (45%), Gaps = 51/573 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TF  ++ GL   G+   A+++LDEM+ +G  P    Y +++   C+      + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC+ D    N +LN  C+   VDEA+ LLR         +L  + C       
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR---------KLAFFGC------- 212

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              E D+V Y  +++GL  A +  D  +L+ +M      P+   
Sbjct: 213 -------------------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N ++ GLC A   ++A  L  +M     P              D  +  
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL-------------DDVTFN 360

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ +C  GL+ +  ++L Q+   G +PD+ITY ++INGFCK G I+ A+ L K +   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P++V+Y  ++ GL    R  DA  +  QM Q GC P+P  + +L+ + C++     A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+     
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L ++G+V + + +F  + +            +I  LCKR   D A+D F Y + NG +  
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
                 L++ L  + +     A  LL  + S G
Sbjct: 601 ESTYTMLIKGL--ASEGLAKEAQELLSELCSRG 631



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 235/491 (47%), Gaps = 15/491 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+     + +  ++ V++    + G    ++     M    C  D    N VLN  
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +     A+ +  ++    C  +IV+++ ++ GL  + +     +++DEM +    PN 
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I  LC+    +  + +  +M + GC+PD   Y  +++G CK   ++ A  +L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  Y+ ++ GL  A+R+ EA     +MF++    D V + +++    + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V   ++LL  M   G +PD   Y  +I GFC  GL+D+A  L   +      PNT ++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-G 442
           ++ G+C  G   DA++L ++M + GC P+   FN LI+ LCK G +E+A  L  +M + G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P L               S  T+++    AG   +A ++L  +   G  P+ I Y+S+
Sbjct: 492 CSPDLI--------------SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                + G +N  +++F  ++   +R D+V Y  +I+ L +    + A   F  M  NGC
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 563 TPSPAVYKSLM 573
            P+ + Y  L+
Sbjct: 598 MPNESTYTMLI 608



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 229/482 (47%), Gaps = 19/482 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           FF ++ G    G    ALE   +M    C P   +Y+ +L  A R   F  ++ V   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C  +    +L++N + + G  + A+ +L ++   G   +  +Y  V+ GLC   R  
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCK---LRRVDEALALLRSFEKDGFVPRLGSYS 277
           +   L  +M    C+P+ V +N L+   C+     RV E LA      + G  P +  Y+
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA---QMSEHGCTPDIRMYA 290

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +IDG+ +    + A     +M    ++P+VV Y  +++GL  A + K+A +LLS+M ++
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
               D   +N L+  FC  GL+D+   L  ++     +P+  T+T +I G C+ G++D+A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             L   M   GC P+   +  ++ GLC AG    A  L  +M           + QG   
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-----------IQQGCP- 458

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  T++   C  GL+ +A ++L Q+  +G  PD+I+Y+++I+G  K G    AL+
Sbjct: 459 -PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +  KG+ P+++ Y ++   L R  R     ++F  +          +Y ++++  C
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 578 RR 579
           +R
Sbjct: 578 KR 579



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 239/507 (47%), Gaps = 22/507 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++    +  GF    + L+ + +   ++ +    ++++   + G  ++A+    K+  F 
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+ D+  YNAVL      + +     +  EMV+++C PNIVTF+ LI  L ++G  E   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L +M++ G  P+   Y  +I G+C+    + A  +  +M   G  P+ V YN +L G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 249 CKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           C   R  EA  LL   F+KD  +  + +++ L+D   +    D       +M      PD
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V+ Y  +I G  + G + +A+ LL  M   G  P+T  Y  ++KG C  G    A  L  
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ ++   PN  TF  LI  +C+ G+V+ A +L  +M   GC P +  ++ +IDGL KAG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 428 ELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           + E+A  LL   +  G +P   +            +S+   + +    G ++K  ++   
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIY-----------SSIACALSR---EGRVNKVIQMFDN 556

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++    D + YN++I+  CK    + A+  F  +   G  P+  TY  LI GL     
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ++A  +  ++   G     A+ K LM
Sbjct: 617 AKEAQELLSELCSRG-----ALRKHLM 638



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  ++ G       ++A E   +M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M+   C+P+++T++ +ING  K G  + 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M+  G  PN  +YTIV+ GLC   R  +A  L  +M   GC P+ V +N L+N
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + +EA      M  + I P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G+V   +++  ++++  I  D   YNA+I   C     D+A    
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+T+LI G+   G+  +AQ+L +++   G
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 182/428 (42%), Gaps = 28/428 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR L  AG+  +A + L+D  +   V     YNA++ G+C  G   Q  + +       
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAG---QLAAARRLAAAVP 106

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN +TF  ++ G+C  G + DA ++ ++M   GC P   M++ +++  C++G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +   M   K  TL            D  +   ++   C  G + +A  +L +LA  G  
Sbjct: 167 RVLEAMH-AKGCTL------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE 213

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            DI++YN+++ G C         +L  E+      P+ VT+ TLI  L R    E    +
Sbjct: 214 ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY----LRDISGRDDESMKSIEE 609
             QM ++GCTP   +Y +++   C+     +A  +  +     L+      +  +K +  
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
             +  E E  +  + + D  L+D     + I +   CQ+G V   + +   ++    +  
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVT---FNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             +   +I+G CK G +D A  V L    +    +P   +Y +         + V A  L
Sbjct: 391 VITYTTVINGFCKEGLIDEA--VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 730 LCRMKSVG 737
           + +M   G
Sbjct: 449 MSQMIQQG 456



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ YN+++ G+C+ G +  A +L   + +    P++ T+  ++ GL    R  DA  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-LWLQYLRDISGRDDESMKSIEEFLQKG 614
           +M   GC P P +Y  ++  +CR   F  +   L   + +  +         +    ++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD---GQVKEALNIFSVLVECKA-IVTP 670
            V+ A+  L ++ F   +  +  Y   L GLC     G V+E ++   V V+C   IVT 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTF 254

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   LI  LC+ G  +   +V     ++G     R+   ++  +   K+     A  +L
Sbjct: 255 NT---LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI--CKEGHLEVANEIL 309

Query: 731 CRMKSVGYDLDACLY 745
            RM S G   +   Y
Sbjct: 310 NRMPSYGLKPNVVCY 324



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  +S  + ++  +     + G   K ++ F  +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K+   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           + A ++L E+  RG L         IS   Q N
Sbjct: 618 KEAQELLSELCSRGALRKHLMRHFGISNCTQEN 650



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 77/373 (20%), Positives = 132/373 (35%), Gaps = 56/373 (15%)

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH----------------DK 461
           ALI  LC AG   +A               +  +  G  R                  + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP--------------------------- 494
            +   +V   CT G I  A ++L +++  G  P                           
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 495 --------DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                   D    N ++N  C+ G ++ A+ L ++L   G   D V+Y  ++ GL    R
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             D   +  +M +  C P+   + +L+ + CR   F     +  Q + +     D  M +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQ-MSEHGCTPDIRMYA 290

Query: 607 --IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             I+   ++G +E A + L  M        +  Y   L GLC   + KEA  + S + + 
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              +   +   L+   C+ G +D  +++    L +G +  P V  Y      F K+    
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM--PDVITYTTVINGFCKEGLID 408

Query: 725 HAYHLLCRMKSVG 737
            A  LL  M S G
Sbjct: 409 EAVMLLKSMSSCG 421


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 182/698 (26%), Positives = 318/698 (45%), Gaps = 32/698 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD---LYWQT 85
           LS   +  ++   K+P      F  A +R     F+ +SAV   +L+    D   L    
Sbjct: 8   LSPHRLLKLLKAEKSPLSALNVFDAAVRRP---GFSPSSAVFHHILRRVAADPGLLLAHA 64

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIAF 144
              + + +     DV   L+  Y K     +AL  F  M   F C P +  +N +LN   
Sbjct: 65  PRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFV 124

Query: 145 RKQLFLLA--LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
               +  A     Y+E  +++  PN+ T+++L+  + K G+ E    +L  M   G+ P+
Sbjct: 125 ESHQWARAENFFKYFEAARVS--PNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPD 182

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           + TY  +I G+ +      A  +F +M++ G  PD V YN +++GF K     +A  +  
Sbjct: 183 RITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWE 242

Query: 263 SFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
              ++  V P + SY+ +I GL +  R+ E    + +M + + + D+  Y  +I GLSEA
Sbjct: 243 RLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEA 302

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G +  A K+  +M  RG+ PD    NA++ G C  G +++   L  E+ K  SL N  ++
Sbjct: 303 GDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGK-CSLRNVRSY 361

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
            I + G+  NG VDDA  L++ + +A        +  ++ GLC  G + +A  +  + E 
Sbjct: 362 NIFLKGLFENGKVDDAMMLWDGLLEA----DSATYGVVVHGLCWNGYVNRALQVLEEAE- 416

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                      +GG  V D+ +  +++   C  G + +A  ++  + + G   +    N 
Sbjct: 417 ---------HREGGMDV-DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNV 466

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           LI+GF K   ++ A+K+F+E+  KG     V+Y  LINGL R +R  +A+    +M + G
Sbjct: 467 LIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKG 526

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENA 619
             P    Y +L+           A  LW Q+L D   + D  M +I        G+VE+A
Sbjct: 527 WKPDIITYSTLIGGLYESNMMDAALRLWHQFL-DTGHKPDIIMYNIVIHRLCSSGKVEDA 585

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           +Q L     +     L  +   + G  + G  + A  I++ ++E +      S    + G
Sbjct: 586 LQ-LYSTLRQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKG 644

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           LC  G +  A+      L  GF+      N L+R+++F
Sbjct: 645 LCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAVIF 682



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 191/445 (42%), Gaps = 61/445 (13%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +  +  ++    E+ +   A           + P+   YN L+K  C  G  ++ R L
Sbjct: 111 PTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGL 170

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +W     P+  T+  LI G+ ++G +  A ++F++M + G  P V  +N +IDG  K
Sbjct: 171 LTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFK 230

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G+  KA  ++ ++   +   +F  +           S   M+   C  G   +  +I  
Sbjct: 231 RGDFVKAGEMWERLL--REELVFPSV----------VSYNVMISGLCKCGRFSEGLEIWE 278

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ ++    D+ TY++LI+G  + G++ GA K+++E+  +G+RPD VT   ++NGL +  
Sbjct: 279 RMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAG 338

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
             E+ F ++ +M +                 C  R    +++++L+ L            
Sbjct: 339 NVEECFELWEEMGK-----------------CSLRNVR-SYNIFLKGL------------ 368

Query: 606 SIEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF--SV 660
                 + G+V++A+    GLLE D        A Y + + GLC +G V  AL +   + 
Sbjct: 369 -----FENGKVDDAMMLWDGLLEADS-------ATYGVVVHGLCWNGYVNRALQVLEEAE 416

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
             E    V   +   LI+ LCK G LD A  V     K G      VCN L+    F K 
Sbjct: 417 HREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDG--FVKH 474

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLY 745
           +K   A  +   M   G  L    Y
Sbjct: 475 SKLDSAVKVFREMSGKGCSLTVVSY 499


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 259/573 (45%), Gaps = 51/573 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TF  ++ GL   G+   A+++LDEM+ +G  P    Y +++   C+      + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC+ D    N +LN  C+   VDEA+ LLR         +L  + C       
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR---------KLAFFGC------- 212

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              E D+V Y  +++GL  A +  D  +L+ +M      P+   
Sbjct: 213 -------------------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N ++ GLC A   ++A  L  +M     P              D  +  
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL-------------DDVTFN 360

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ +C  GL+ +  ++L Q+   G +PD+ITY ++INGFCK G I+ A+ L K +   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P++V+Y  ++ GL    R  DA  +  QM Q GC P+P  + +L+ + C++     A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+     
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L ++G+V + + +F  + +            +I  LCKR   D A+D F Y + NG +  
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
                 L++ L  + +     A  LL  + S G
Sbjct: 601 ESTYTMLIKGL--ASEGLAKEAQELLSELCSRG 631



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 235/491 (47%), Gaps = 15/491 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+     + +  ++ V++    + G    ++     M    C  D    N VLN  
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +     A+ +  ++    C  +IV+++ ++ GL  + +     +++DEM +    PN 
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I  LC+    +  + +  +M + GC+PD   Y  +++G CK   ++ A  +L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  Y+ ++ GL  A+R+ EA     +MF++    D V + +++    + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V   ++LL  M   G +PD   Y  +I GFC  GL+D+A  L   +      PNT ++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-G 442
           ++ G+C  G   DA++L ++M + GC P+   FN LI+ LCK G +E+A  L  +M + G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P L               S  T+++    AG   +A ++L  +   G  P+ I Y+S+
Sbjct: 492 CSPDLI--------------SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                + G +N  +++F  ++   +R D+V Y  +I+ L +    + A   F  M  NGC
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 563 TPSPAVYKSLM 573
            P+ + Y  L+
Sbjct: 598 MPNESTYTMLI 608



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 229/483 (47%), Gaps = 19/483 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            FF ++ G    G    ALE   +M    C P   +Y+ +L  A R   F  ++ V   M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C  +    +L++N + + G  + A+ +L ++   G   +  +Y  V+ GLC   R 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCK---LRRVDEALALLRSFEKDGFVPRLGSY 276
            +   L  +M    C+P+ V +N L+   C+     RV E LA      + G  P +  Y
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA---QMSEHGCTPDIRMY 289

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +IDG+ +    + A     +M    ++P+VV Y  +++GL  A + K+A +LLS+M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +    D   +N L+  FC  GL+D+   L  ++     +P+  T+T +I G C+ G++D+
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A  L   M   GC P+   +  ++ GLC AG    A  L  +M           + QG  
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-----------IQQGCP 458

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              +  +  T++   C  GL+ +A ++L Q+  +G  PD+I+Y+++I+G  K G    AL
Sbjct: 459 --PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           +L   +  KG+ P+++ Y ++   L R  R     ++F  +          +Y ++++  
Sbjct: 517 ELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSL 576

Query: 577 CRR 579
           C+R
Sbjct: 577 CKR 579



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 239/507 (47%), Gaps = 22/507 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++    +  GF    + L+ + +   ++ +    ++++   + G  ++A+    K+  F 
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+ D+  YNAVL      + +     +  EMV+++C PNIVTF+ LI  L ++G  E   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L +M++ G  P+   Y  +I G+C+    + A  +  +M   G  P+ V YN +L G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 249 CKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           C   R  EA  LL   F+KD  +  + +++ L+D   +    D       +M      PD
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V+ Y  +I G  + G + +A+ LL  M   G  P+T  Y  ++KG C  G    A  L  
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ ++   PN  TF  LI  +C+ G+V+ A +L  +M   GC P +  ++ +IDGL KAG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 428 ELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           + E+A  LL   +  G +P   +            +S+   + +    G ++K  ++   
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIY-----------SSIACALSR---EGRVNKVIQMFDN 556

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++    D + YN++I+  CK    + A+  F  +   G  P+  TY  LI GL     
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ++A  +  ++   G     A+ K LM
Sbjct: 617 AKEAQELLSELCSRG-----ALRKHLM 638



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  ++ G       ++A E   +M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M+   C+P+++T++ +ING  K G  + 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M+  G  PN  +YTIV+ GLC   R  +A  L  +M   GC P+ V +N L+N
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + +EA      M  + I P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G+V   +++  ++++  I  D   YNA+I   C     D+A    
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+T+LI G+   G+  +AQ+L +++   G
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 182/428 (42%), Gaps = 28/428 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR L  AG+  +A + L+D  +   V     YNA++ G+C  G   Q  + +       
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAG---QLAAARRLAAAVP 106

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN +TF  ++ G+C  G + DA ++ ++M   GC P   M++ +++  C++G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +   M   K  TL            D  +   ++   C  G + +A  +L +LA  G  
Sbjct: 167 RVLEAMH-AKGCTL------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE 213

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            DI++YN+++ G C         +L  E+      P+ VT+ TLI  L R    E    +
Sbjct: 214 ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY----LRDISGRDDESMKSIEE 609
             QM ++GCTP   +Y +++   C+     +A  +  +     L+      +  +K +  
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
             +  E E  +  + + D  L+D     + I +   CQ+G V   + +   ++    +  
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVT---FNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             +   +I+G CK G +D A  V L    +    +P   +Y +         + V A  L
Sbjct: 391 VITYTTVINGFCKEGLIDEA--VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 730 LCRMKSVG 737
           + +M   G
Sbjct: 449 MSQMIQQG 456



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ YN+++ G+C+ G +  A +L   + +    P++ T+  ++ GL    R  DA  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-LWLQYLRDISGRDDESMKSIEEFLQKG 614
           +M   GC P P +Y  ++  +CR   F  +   L   + +  +         +    ++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD---GQVKEALNIFSVLVECKA-IVTP 670
            V+ A+  L ++ F   +  +  Y   L GLC     G V+E ++   V V+C   IVT 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTF 254

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   LI  LC+ G  +   +V     ++G     R+   ++  +   K+     A  +L
Sbjct: 255 NT---LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI--CKEGHLEVANEIL 309

Query: 731 CRMKSVGYDLDACLY 745
            RM S G   +   Y
Sbjct: 310 NRMPSYGLKPNVVCY 324



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  +S  + ++  +     + G   K ++ F  +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K+   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           + A ++L E+  RG L         IS   Q N
Sbjct: 618 KEAQELLSELCSRGALRKHLMRHFGISNCTQEN 650



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 129/372 (34%), Gaps = 54/372 (14%)

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH----------------DK 461
           ALI  LC AG   +A               +  +  G  R                  + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP--------------------------- 494
            +   +V   CT G I  A ++L +++  G  P                           
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 495 --------DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                   D    N ++N  C+ G ++ A+ L ++L   G   D V+Y  ++ GL    R
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             D   +  +M +  C P+   + +L+ + CR   F     +  Q        D     +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I+   ++G +E A + L  M        +  Y   L GLC   + KEA  + S + +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
             +   +   L+   C+ G +D  +++    L +G +  P V  Y      F K+     
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM--PDVITYTTVINGFCKEGLIDE 409

Query: 726 AYHLLCRMKSVG 737
           A  LL  M S G
Sbjct: 410 AVMLLKSMSSCG 421


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 229/458 (50%), Gaps = 13/458 (2%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P  + +N +L+   + +    AL+++ +M       +  TF++LIN  S+ G   ++  +
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
             ++ ++G  P   T+  +I GLC      +A     K+   G   D V+Y  L+NG CK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           + R+  AL LL+  +     P    Y+ +ID + +AK  ++A+  Y +M  ++I PDV  
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G S   K+  A+ L + M++  I P+ Y +N L+ GFC  G ++ A+ +   + 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K D  P+  T+  L+ G C    V+ A+ +F+ M   G   +V ++  +++G CK   ++
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A  LF +M   K              + +  +  ++++  C  G I  A K++ ++ + 
Sbjct: 359 EAINLFEEMRCRK-------------IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P+I+TY+S+++  CK  +++ A+ L   L+ +G+RPD  TY  LI GL +  R EDA
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             +F  +   G       Y  ++   C +  F  A +L
Sbjct: 466 QNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALAL 503



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 230/476 (48%), Gaps = 25/476 (5%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  ++S   K      AL    +M+    + D + +N ++N   +  L  L+ +++ +++
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P  +TF+ LI GL   G    A+   D++  +G   ++ +Y  +I+GLC++ R  
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A +L  ++      P+ V YN +++  CK + V++A  L          P + +Y+ LI
Sbjct: 184 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALI 243

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G     + + A   + KM +E I P+V  + +++ G  + GKV DA  +L+ M +  I 
Sbjct: 244 SGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN+L+ G+C +  +++A+ +   +     + N   +T ++ G C+  MVD+A  L
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F +M      P+V  +++LIDGLCK G       +FY +++              + +HD
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGR------IFYALKL-------------VDEMHD 404

Query: 461 KA------SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           +       +  ++++  C    + KA  +L  L + G  PD+ TY  LI G C+ G +  
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           A  +F++L +KG   D   Y  +I G       + A  +  +M  NGC P+   Y+
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYE 520



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 227/497 (45%), Gaps = 47/497 (9%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N  P    F+ +++ L K+     A+ +  +M   GI  + FT+ I+I+   Q+     +
Sbjct: 56  NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + +F K+   G  P  + +N L+ G C    + +AL         GF     SY  LI+G
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  R   A    +++  + ++P+ V+Y ++I  + +A  V DA  L S M  + I PD
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + YNALI GF  +  L+ A  L  ++ K +  PN +TF IL+ G C+ G V+DA+ +  
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M K    P V  +N+L+DG C   ++ KA  +F  M               G  + +  
Sbjct: 296 IMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA-------------SGGVIANVQ 342

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
              TMV  +C   ++ +A  +  ++     +P+++TY+SLI+G CK+G I  ALKL  E+
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM 402

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             +G  P+ VTY ++++ L +    + A  +   +   G  P    Y  L+   C+    
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ---- 458

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                         SGR +++    E+ L KG                 +  +  YT+ +
Sbjct: 459 --------------SGRLEDAQNVFEDLLVKGY----------------NLDVYAYTVMI 488

Query: 643 IGLCQDGQVKEALNIFS 659
            G C  G   +AL + S
Sbjct: 489 QGFCDKGFFDKALALLS 505



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 241/520 (46%), Gaps = 48/520 (9%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P  F +  ++S L +      A  L  +M+ +G   DF  +N L+N F +L     + ++
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                K G+ P   +++ LI GL       +A  ++ K+  +    D V YG +I GL +
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G++  A++LL  +  + + P+   YN +I   C   L++ A  L  ++  +   P+  T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +  LI G      ++ A  LFNKM+K    P+V  FN L+DG CK G++  A ++     
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV----- 293

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                   L +    +   D  +  ++++ YC+   ++KA  I   +A  G + ++  Y 
Sbjct: 294 --------LAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +++NGFCK+  ++ A+ LF+E++ + + P+ VTY +LI+GL ++ R   A ++  +M   
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           G  P+   Y S++   C+      A +L L  L+D   R D                   
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIAL-LTNLKDQGIRPD------------------- 445

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
                         +  YTI + GLCQ G++++A N+F  L+     +   +   +I G 
Sbjct: 446 --------------MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           C +G+ D A+ +      NG I   +    ++ S LF KD
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILS-LFEKD 530



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 168/323 (52%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A + + +M      PDV+ YNA+++          A+ ++ +M K N  PN+ TF++L++
Sbjct: 220 AFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  K GK   A  +L  M +  I P+  TY  ++ G C IN+ ++A  +F  M   G   
Sbjct: 280 GFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIA 339

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   Y  ++NGFCK++ VDEA+ L         +P + +YS LIDGL +  R   A    
Sbjct: 340 NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M +    P++V Y  ++  L +   V  A+ LL++++++GI PD Y Y  LIKG C  
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L+ A+++  ++  +    + + +T++I G C  G  D A  L +KME  GC P+   +
Sbjct: 460 GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTY 519

Query: 417 NALIDGLCKAGELEKANLLFYKM 439
             +I  L +  E + A  L  +M
Sbjct: 520 ELVILSLFEKDENDTAEKLLREM 542



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 1/320 (0%)

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
             AKR     F  N A+IS     +  +      ++++  N++     F +L+ G+ K G
Sbjct: 227 MVAKRICPDVFTYN-ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
               A      M + D +PDV  YN++++          A  ++  M     + N+  ++
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            ++NG  K    + AI + +EM  R I+PN  TY+ +I GLC++ R   A +L  +M D 
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDR 405

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  P+ V Y+++L+  CK   VD+A+ALL + +  G  P + +Y+ LI GL ++ R ++A
Sbjct: 406 GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDA 465

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +  +  +    DV  Y VMI+G  + G    A+ LLS M + G +P+   Y  +I  
Sbjct: 466 QNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS 525

Query: 353 FCDLGLLDQARSLQVEIWKR 372
             +    D A  L  E+  R
Sbjct: 526 LFEKDENDTAEKLLREMIVR 545



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 121/237 (51%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  +    KA + F  M       +V IY  ++N   + ++   A+ ++ EM    
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN+VT+S LI+GL K G+   A+K++DEM  RG  PN  TY+ ++  LC+ +  D+A 
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   +KD G  PD   Y  L+ G C+  R+++A  +       G+   + +Y+ +I G 
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                +D+A A   KM +    P+   Y ++I  L E  +   A KLL +M  RG++
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R +  +  + S+++  L K +  D     L  L+   +      + +LI G  + G  E 
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A   F  +       DVY Y  ++     K  F  ALA+  +M    C+PN  T+ L+I 
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVIL 524

Query: 177 GLSKSGKTEVAIKMLDEMTQRGIL 200
            L +  + + A K+L EM  RG+L
Sbjct: 525 SLFEKDENDTAEKLLREMIVRGLL 548


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 226/454 (49%), Gaps = 26/454 (5%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TFS+LI GL K+G+   A++  ++M +R  +PN     ++++ LCQ  + D+A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLF 284
           F  ++   CSP  +  N L+NGFC+L+ +D+AL L    EK+   VP   +Y+ +I    
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 285 RAKRYDEAYAWYRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVP 341
           +  R D+A    R++ EE      DV+    + RG  +A +V +A +LL DM E +   P
Sbjct: 118 KMDRLDQA----RQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   +N +I GFC  G + +A  +   +     +PN  T+T LI G C++G + +A +LF
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 402 NKMEK--AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             +        P+V  FNALI GLCKA  LE A  L  +M             +  +   
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM-------------KARDLRA 280

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T+++  C  G   +  ++  ++   G  P ++TY +L++  CK G++  A ++ 
Sbjct: 281 DTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI 340

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +  KG+ PD  TY  L+ GL    +   A   F ++ +  C P   VY +L+   C+ 
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
                A   +++ L      D  + K + E L K
Sbjct: 401 ALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 220/435 (50%), Gaps = 28/435 (6%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIV 209
           A+  Y +M++ +C+PN+   +LL+  L ++GK + A+ +      RGI   P+  T  I+
Sbjct: 22  AVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF-----RGIQCSPSVITLNIL 76

Query: 210 ISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           I+G C++   D+A  LF +M K+    P+   Y A++  +CK+ R+D+A  LL   E   
Sbjct: 77  INGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE--ESSC 134

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEAGKVKDA 327
               + + + +  G  +A+R DEAY     M E+K  +PD+V + V+I G  +AG+V++A
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREA 194

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD--SLPNTHTFTILI 385
            ++L  +   G VP+   Y  LI GFC  G L +A  L   +  RD  + PN  TF  LI
Sbjct: 195 YEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALI 254

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G+C+   ++ A +L  +M+          +  L+DGLCK G   + + +F +M   G N
Sbjct: 255 SGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCN 314

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P++               +  T+V  +C AG +  A +++  +   G  PD+ TY  L+ 
Sbjct: 315 PSV--------------VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G  + G +  A + F+++  +   P +V Y  L+ G  +    ++A + + +M      P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420

Query: 565 SPAVYKSLMTWSCRR 579
            PA  K L+   C+R
Sbjct: 421 DPATCKLLVEMLCKR 435



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 226/487 (46%), Gaps = 62/487 (12%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+   ++ L+ G CK  R+ EA+       +   VP L   + L+  L +A + D+A A 
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIKGFC 354
           +R +   +  P V+   ++I G  E   +  A++L  +M +   +VP+   Y A+IK +C
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA-QKLFNKMEKAGCFPSV 413
            +  LDQAR L  E     S  +    T +  G C+   VD+A Q L + +EK    P +
Sbjct: 118 KMDRLDQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N +I G CKAG + +A    Y+M       L   +S G   V +  +  T+++ +C 
Sbjct: 176 VAWNVIIHGFCKAGRVREA----YEM-------LETLVSMGC--VPNAVTYTTLIDGFCK 222

Query: 474 AGLIHKAYKILMQLAESGNL--PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           +G + +A ++   L+   +   P+++T+N+LI+G CK   +  A +L K+++ + LR D+
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            TY TL++GL +  R  +  R+F +M + GC PS   Y +L+   C+             
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK------------- 329

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                                 G +++A Q +  M  K     +  YT+ L GL ++G+V
Sbjct: 330 ---------------------AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           + A   F  ++  +    PP  V    L+ G CK   +D A+  ++  L       P  C
Sbjct: 369 RTATEFFEKILRERC---PPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 709 NYLLRSL 715
             L+  L
Sbjct: 426 KLLVEML 432



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 199/448 (44%), Gaps = 88/448 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F VLI+G  K G   +A+E + +M E  C P++   N +L    +      A+A++   
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFR-- 62

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVIS------- 211
             + C P+++T ++LING  +    + A+++  EM +   ++P   TYT +I        
Sbjct: 63  -GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 212 --------------------------GLCQINRADEAYRLFLKM-KDSGCSPDFVAYNAL 244
                                     G C+  R DEAY+L L M +     PD VA+N +
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF--EE 302
           ++GFCK  RV EA  +L +    G VP   +Y+ LIDG  ++    EA   ++ +   + 
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
             EP+VV +  +I GL +A +++ A +L+  M+ R +  DT+ Y  L+ G C  G   + 
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL---------------------- 400
             +  E+ +    P+  T+T L+   C+ G + DAQ++                      
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361

Query: 401 -------------FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
                        F K+ +  C P   +++AL+ G CKA  +++A   + +M       L
Sbjct: 362 LFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM-------L 414

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAG 475
             RL+       D A+ + +VE  C  G
Sbjct: 415 DRRLAP------DPATCKLLVEMLCKRG 436



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 14/378 (3%)

Query: 61  RSFASNSAVISMLLKPNGF------DLYWQTLDELRSGNVSVVSD--VFFVLISGYYKVG 112
           R    + +VI++ +  NGF      D   +   E+   N ++V +   +  +I  Y K+ 
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEK-NFALVPEATTYTAIIKCYCKMD 120

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTF 171
             ++A +   +     C  DV    +V     + Q    A  +  +MV K +  P+IV +
Sbjct: 121 RLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF--LKM 229
           +++I+G  K+G+   A +ML+ +   G +PN  TYT +I G C+     EA +LF  L  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +D    P+ V +NAL++G CK  R++ A  L++  +         +Y+ L+DGL +  R 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            E    + +M  E   P VV Y  ++    +AG ++DA +++  M  +GI PD   Y  L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           ++G  + G +  A     +I +    P    ++ L+ G C+  +VD+A K + +M     
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 410 FPSVGMFNALIDGLCKAG 427
            P       L++ LCK G
Sbjct: 419 APDPATCKLLVEMLCKRG 436



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 5/332 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I    K +  D   Q L+E    +  V++     +  G+ K    ++A +    M E
Sbjct: 110 TAIIKCYCKMDRLDQARQLLEESSCCSSDVIA--ITSVARGFCKAQRVDEAYQLLLDMVE 167

Query: 127 F-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               +PD+  +N +++   +      A  +   +V + C+PN VT++ LI+G  KSG   
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLS 227

Query: 186 VAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            A+++   ++ R     PN  T+  +ISGLC+ +R + A+ L  +MK      D   Y  
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G CK  R  E   +     ++G  P + +Y+ L+    +A    +A    R M  + 
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I PDV  Y V++ GL E GKV+ A +    +      P    Y+AL++G C   L+D+A 
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
              VE+  R   P+  T  +L+  +C+ G  D
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%)

Query: 62  SFASNSAVISMLLKPNGF-------DLYWQTLD--ELRSGNVSVVSDVFFVLISGYYKVG 112
           S   +S VI++     GF       + Y   LD  E +S    +V+  + V+I G+ K G
Sbjct: 132 SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA--WNVIIHGFCKAG 189

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVL-------NIAFRKQLFLLALAVYYEMVKLNCL 165
              +A E    +    C P+   Y  ++       N++   QLF +  +  +        
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE----- 244

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+VTF+ LI+GL K+ + E A +++ +M  R +  + FTYT ++ GLC+  R  E  R+
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M   GC+P  V Y  L++  CK   + +A  ++RS    G  P + +Y+ L++GLF 
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +   A  ++ K+  E+  P  V+Y  ++RG  +A  V +A+K   +M +R + PD   
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 346 YNALIKGFCDLGLLD 360
              L++  C  G  D
Sbjct: 425 CKLLVEMLCKRGRTD 439



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 52/326 (15%)

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+   F+ LI GLCKAG L +A   + +M + ++    LR             +  ++  
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQM-LERHCVPNLR------------DINLLLAS 47

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK-GLRP 529
            C AG + +A  I   +  S   P +IT N LINGFC++  ++ AL+LF E++    L P
Sbjct: 48  LCQAGKMDQAMAIFRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           ++ TY  +I    ++DR + A ++  +   + C+       S+    C+ ++   A+ L 
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           L  +   S + D                                 +  + + + G C+ G
Sbjct: 163 LDMVEKKSAKPD---------------------------------IVAWNVIIHGFCKAG 189

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           +V+EA  +   LV    +    +   LI G CK G L  A+ +F           P V  
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKS 735
           +        K ++  HA+ L+ +MK+
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKA 275


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 253/557 (45%), Gaps = 58/557 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D   Q L E+   ++S     F  +I+G  K G   KA +   +MKE
Sbjct: 388 TVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKE 447

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y  V++ +F+      AL VY+EM+      N      L+NGL K+GK E 
Sbjct: 448 RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEK 507

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  EM +RG+L +   YT +I GL +      A+++  ++ +    PD V YN  +N
Sbjct: 508 AEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFIN 567

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C L +  EA + L   +  G  P   +Y+ +I    R  +  +A      M    I+P
Sbjct: 568 CLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKP 627

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP------------------------- 341
           +++ Y  +I GL EAG V+ A  LL++M   G  P                         
Sbjct: 628 NLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIH 687

Query: 342 ----------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                     D   YN L++  C  G+  +A  +  E+  R   P+T TF  LI G  ++
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G +D+A   +++M   G  P+V  FN L+ GL  AG + +++++  +M+  G  P+    
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPS---- 803

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                N  +D      +V  Y       +A ++  ++   G LP + TYN+LI+ F KVG
Sbjct: 804 -----NLTYD-----ILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A +LF E+Q +G+ P S TY  L++G  ++    +  +    M + G +PS     
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 571 SL--------MTWSCRR 579
           S+        M+W  RR
Sbjct: 914 SISRAFSKPGMSWEARR 930



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 180/683 (26%), Positives = 295/683 (43%), Gaps = 61/683 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L++G  + G+ + A +    MK    +P+V  Y   +    R+     A ++Y EMV+  
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            LP++VT S L+ GL K G+   A  +  EM + G  PN  TY ++I  L +  R +E+ 
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  ++   G   D + Y AL++  CK  ++DEA  + R    D   P   +Y+ LID L
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +A   D A     +M E+ I P+VV +  +I GL + G V  A   + +M+ERGI P+ 
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 344 YCYNALIKGFCDLGLLDQARSLQV--EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
             Y  +I G      L Q  +L V  E+       N      L+ G+ +NG ++ A+ LF
Sbjct: 455 VTYGTVIDG--SFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M + G       +  LIDGL K G L  A       ++G+  T         N + D 
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAA------FKVGQELT-------EKNLLPDA 559

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                 +   C  G   +A   L ++  +G  PD +TYN++I    + G    ALKL   
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++   ++P+ +TY TLI GL      E A  +  +M  +G +P+   ++ ++    + R+
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 582 FSLAFSL--WLQ---YLRDIS------------GRDDESMKSIEEF-------------- 610
             L   +  W+       DI+            G   ++M  +EE               
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 611 -----LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                 + G ++NA     +M +      +A +   L GL   G++ E+     VL E K
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES---DMVLNEMK 796

Query: 666 AIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
                PS +    L+ G  K+     A+ ++   +  GF+  P+V  Y      FSK   
Sbjct: 797 KRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFL--PKVSTYNALISDFSKVGM 854

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
              A  L   M++ G    +C Y
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTY 877



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 154/619 (24%), Positives = 280/619 (45%), Gaps = 61/619 (9%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++V ++ L++G  K G  E A  + + M  +G+  +   Y  +++GLC+    D A  + 
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV 232

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             MK  G  P+ V Y   +  +C+   VD+A +L     + G +P + + S L+ GL + 
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R+ EAYA +R+M +    P+ V Y ++I  L++A +  +++ LL ++  RG+V D   Y
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            AL+   C  G +D+A+ +       +  PN  T+T+LI  +C+ G VD A+++ ++ME+
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNR-VHDKA 462
               P+V  F+++I+GL K G + KA     +M+   I  N   +  +  G  + +  +A
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472

Query: 463 SLQTMVEQYCTA------------------GLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           +L    E  C                    G I KA  +  ++ E G L D + Y +LI+
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G  K GN+  A K+ +EL  K L PD+V Y   IN L  + + ++A     +M   G  P
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y +++    R  K + A  L                               + G+ 
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKL-------------------------------LNGMK 621

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
               K N   L  Y+  ++GL + G V++A  + + +       T  +  +++    +  
Sbjct: 622 RSSIKPN---LITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGR 678

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
             DL +++  + +  G      V N L+R L ++   +K  A  +L  M   G   D   
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRK--AMVVLEEMSGRGIAPDTIT 736

Query: 745 YPKTKSLLPGPWNTREMEN 763
           +    +L+ G + +  ++N
Sbjct: 737 F---NALILGHFKSGHLDN 752



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/636 (26%), Positives = 272/636 (42%), Gaps = 72/636 (11%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY KVGD E A     +MK      DV  YN+                         
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNS------------------------- 214

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
                     L+ GL ++G+ + A  M+D M + G+ PN  TYT+ I   C+ N  D+A+
Sbjct: 215 ----------LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAF 264

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L+ +M   G  PD V  +AL+ G CK  R  EA AL R  EK G  P   +Y  LID L
Sbjct: 265 SLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTL 324

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +A+R +E+ +   ++    +  D+++Y  ++  L + GK+ +A  +          P+ 
Sbjct: 325 AKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNG 384

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  LI   C  G +D A  +  E+ ++   PN  TF+ +I G+ + G V  A     +
Sbjct: 385 VTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444

Query: 404 MEKAGCFPSVGMFNALIDG-----------------LCKAGELEK------ANLLFYKME 440
           M++ G  P+V  +  +IDG                 LC+  E+ K       N L    +
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           I K   LF  +++ G  + D  +  T+++     G +  A+K+  +L E   LPD + YN
Sbjct: 505 IEKAEALFREMNERG-VLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYN 563

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
             IN  C +G    A    +E+Q  GL+PD VTY T+I    R  +   A ++   M ++
Sbjct: 564 VFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRS 623

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
              P+   Y +L+           A  L  +           + + + +   +G   + I
Sbjct: 624 SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLI 683

Query: 621 QGLLEMDFKLNDFQLAPYTIW---LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
             + E  + +N    A  T++   +  LC +G  ++A+    VL E       P  +   
Sbjct: 684 LEIHE--WMMNAGLCADITVYNTLVRVLCYNGMTRKAM---VVLEEMSGRGIAPDTITFN 738

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            LI G  K G+LD A   +   L +G  + P V  +
Sbjct: 739 ALILGHFKSGHLDNAFSTYDQMLYHG--ISPNVATF 772



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 257/600 (42%), Gaps = 92/600 (15%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++++ L +    D     +D ++   V      + + I  Y +    + A   + +M  
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV   +A++    +   F  A A++ EM K+   PN VT+ +LI+ L+K+ +   
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           ++ +L E+  RG++ +   YT ++  LC+  + DEA  +F        +P+ V Y  L++
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   VD A  +L   E+    P + ++S +I+GL +     +A  + R+M E  I+P
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 307 DVVLYGVMI-----------------------------------RGLSEAGKVKDAMKLL 331
           +VV YG +I                                    GL + GK++ A  L 
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 332 SDMRERGI-----------------------------------VPDTYCYNALIKGFCDL 356
            +M ERG+                                   +PD   YN  I   C L
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G   +A S   E+      P+  T+  +I    R G    A KL N M+++   P++  +
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLF-----LRLSQGGNR------VH----- 459
           + LI GL +AG +EKA  L  +M   G +PT       L+    G R      +H     
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 460 -----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                D     T+V   C  G+  KA  +L +++  G  PD IT+N+LI G  K G+++ 
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A   + ++   G+ P+  T+ TL+ GL+   R  ++  +  +M + G  PS   Y  L+T
Sbjct: 753 AFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVT 812



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 244/547 (44%), Gaps = 36/547 (6%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           +RA  + R  L +  S  S D V+YN +++GF +   +    ALL    K G      + 
Sbjct: 82  HRALRSLRPALALLRSSESVDTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTV 140

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + ++ GL R  R D A A    M         DVV +  ++ G  + G ++ A  +   M
Sbjct: 141 NTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERM 200

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGM 393
           + +G+  D   YN+L+ G C  G +D AR + V+  KRD + PN  T+T+ I   CR   
Sbjct: 201 KAQGVGVDVVGYNSLVAGLCRAGEVDAARDM-VDTMKRDGVEPNVVTYTMFIVEYCRRNA 259

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLF---- 448
           VDDA  L+ +M + G  P V   +AL+ GLCK G   +A  LF +ME IG  P       
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 449 ----LRLSQGGNR-------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
               L  +Q GN              V D      +++  C  G I +A  +        
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR---VDREE 548
           + P+ +TY  LI+  CK GN++GA ++  E++ K + P+ VT+ ++INGL +   V +  
Sbjct: 380 HTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKAT 439

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           D  R   +M + G  P+   Y +++  S +      A  ++ + L +    +   + S+ 
Sbjct: 440 DYMR---EMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLV 496

Query: 609 EFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
             L+K G++E A     EM+ +        YT  + GL + G +  A  +   L E   +
Sbjct: 497 NGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLL 556

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
                    I+ LC  G    A + FL  +++   L+P    Y       S++ K   A 
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEA-ESFLEEMQSTG-LKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 728 HLLCRMK 734
            LL  MK
Sbjct: 615 KLLNGMK 621



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 176/370 (47%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R  L    + + +I  L K       ++   EL   N+   + V+ V I+    +G  +
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A     +M+    +PD   YN ++    R+     AL +   M + +  PN++T+S LI
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            GL ++G  E A  +L+EM+  G  P   T+  V+    Q  R+D    +   M ++G  
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            D   YN L+   C      +A+ +L      G  P   +++ LI G F++   D A++ 
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           Y +M    I P+V  +  ++ GL  AG++ ++  +L++M++RGI P    Y+ L+ G+  
Sbjct: 757 YDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGK 816

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
                +A  L  E+  +  LP   T+  LI    + GM+  A++LFN+M+  G  P+   
Sbjct: 817 QSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCT 876

Query: 416 FNALIDGLCK 425
           ++ L+ G  K
Sbjct: 877 YDILVSGWSK 886



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 207/460 (45%), Gaps = 32/460 (6%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V Y V++ G SE G +     LL++M +RG+  D    N ++ G C  G +D+A +L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 367 VEIWKRDSLPNTHT--FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
             + +   +       +  L+ G C+ G ++ A  +  +M+  G    V  +N+L+ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 425 KAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           +AGE++ A  +   M+  G  P +               +    + +YC    +  A+ +
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVV--------------TYTMFIVEYCRRNAVDDAFSL 266

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++   G LPD++T ++L+ G CK G  + A  LF+E++  G  P+ VTY  LI+ L +
Sbjct: 267 YEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAK 326

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             R  ++  + G++   G      +Y +LM W C+  K   A  ++   L D    +  +
Sbjct: 327 AQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVT 386

Query: 604 MKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
               I+   + G V+ A Q L EM+ K     +  ++  + GL + G V +A +      
Sbjct: 387 YTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMR--- 443

Query: 663 ECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           E K     P+ V    +I G  K    + A+DV+   L  G  +   + + L+  L   K
Sbjct: 444 EMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGL---K 500

Query: 720 DNKKVHAYHLLCR-MKSVGYDLDACLYPKTKSLLPGPWNT 758
            N K+     L R M   G  LD   Y    +L+ G + T
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNY---TTLIDGLFKT 537



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 140/307 (45%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G ++ G  EKA     +M      P    +  VL    + +   L L ++  M
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +      +I  ++ L+  L  +G T  A+ +L+EM+ RGI P+  T+  +I G  +    
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A+  + +M   G SP+   +N LL G     R+ E+  +L   +K G  P   +Y  L
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +     EA   Y +M  +   P V  Y  +I   S+ G +  A +L ++M+ RG+
Sbjct: 811 VTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGV 870

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P +  Y+ L+ G+  L    + R    ++ ++   P+  T + +     + GM  +A++
Sbjct: 871 LPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARR 930

Query: 400 LFNKMEK 406
           L   + K
Sbjct: 931 LLKNLYK 937



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 4/190 (2%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N F  Y Q L    S NV+     F  L+ G    G   ++     +MK+   +P    Y
Sbjct: 752 NAFSTYDQMLYHGISPNVAT----FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTY 807

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           + ++    ++   + A+ +Y EMV    LP + T++ LI+  SK G    A ++ +EM  
Sbjct: 808 DILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQN 867

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+LP   TY I++SG  ++    E  +    MK+ G SP     +++   F K     E
Sbjct: 868 RGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWE 927

Query: 257 ALALLRSFEK 266
           A  LL++  K
Sbjct: 928 ARRLLKNLYK 937


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 179/673 (26%), Positives = 309/673 (45%), Gaps = 87/673 (12%)

Query: 16  TPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK 75
           T +E +L  L P +SKTT   V+    +P   F FF WA++      FA +S    M+L 
Sbjct: 12  TELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRN----GFAHDSRSYFMMLD 67

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFFVL---ISGYYKVGD--CEKALESFGKMKEFDCQ 130
             G           R+GN+++  +  F +    +G  K+ D  C   L S+G        
Sbjct: 68  ILG-----------RNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYG-------- 108

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
                 NA         LF  A+ ++  M      P+++TF+ L+  L K G+T +A  +
Sbjct: 109 ------NA--------GLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSV 154

Query: 191 LDEMT-QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
            DEM    G+ P+ +T+ I+I G C+ +  DE +R F +M    C PD V YN L++G C
Sbjct: 155 FDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLC 214

Query: 250 KLRRVDEALALLRSFEK--DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           +  +V  A  +++   K      P + +Y+ L+ G    +  DEA   + +M    ++P+
Sbjct: 215 RAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPN 274

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSD-MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            + Y  +I+GL E  K     ++L   +  RG VPDT  YN L+   CD G  D+A  + 
Sbjct: 275 DITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMF 334

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-------GCFPSVGMFNAL 419
            ++ +    P++ T+++LI  +C+ G  + A++LF+K+          GC P V  +N +
Sbjct: 335 KKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPI 394

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            D LCK G+  KA  +F ++           + +G     D  S +T++  +C  G    
Sbjct: 395 FDFLCKNGKTHKAERVFRQL-----------MKKG---TQDPPSYKTLIIGHCKEGTFEA 440

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            YK+L+ +     +PD  TY  LINGF + G    A K  + +      P +  + ++++
Sbjct: 441 GYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILS 500

Query: 540 GLQRVD--REEDAFRIF---GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            L + D  RE  +F +     ++ QN    S    + L     R + F +   L+     
Sbjct: 501 ELLKNDFARESASFVVLMIDRKIRQN-INLSTHTMRLLFGSGLRIKAFQIVELLY----- 554

Query: 595 DISGRDDESMKSIEEFL----QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                D+  M  +EE +    Q G++ +A + L     K ++  +    + + GLC+  +
Sbjct: 555 -----DNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKR 609

Query: 651 VKEALNIFSVLVE 663
             EA  ++ +LVE
Sbjct: 610 PLEAFGLYYMLVE 622



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 195/437 (44%), Gaps = 61/437 (13%)

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++R    AG   +A+KL S M+  G+ P    +N+L+      G  + A S+  E+   
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161

Query: 373 DSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
             + P+T+TF ILI G C+N MVD+  + F +M +  C P V  +N L+DGLC+AG    
Sbjct: 162 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAG---- 217

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
                 K+ I  N                              G++ K   +        
Sbjct: 218 ------KVRIAHN---------------------------VVKGMVKKMKDL-------- 236

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD++TY +L+ G+C    I+ AL +F+E+  +GL+P+ +TY TLI GL  V + +   
Sbjct: 237 -SPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIK 295

Query: 552 RIF-GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IE 608
            I  G +   G  P    Y +LM   C    F  A  ++ + ++++  + D +  S  I 
Sbjct: 296 EILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMF-KKMKELKVQPDSATYSVLIR 354

Query: 609 EFLQKGEVENAIQ---GLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVL 661
              Q+G+ E A Q    L + D  L D    P    Y      LC++G+  +A  +F  L
Sbjct: 355 NLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQL 414

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
           ++ K    PPS   LI G CK G  +    + L+ L+  ++  P    Y+L    F +  
Sbjct: 415 MK-KGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYV--PDFETYVLLINGFLQKG 471

Query: 722 KKVHAYHLLCRMKSVGY 738
           + + AY  L RM    Y
Sbjct: 472 EPILAYKTLERMLKSSY 488



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 64/344 (18%), Positives = 122/344 (35%), Gaps = 77/344 (22%)

Query: 61  RSFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R F  ++   + L+        FD   +   +++   V   S  + VLI    + GD E+
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364

Query: 117 ALESFGKMKEFD-------CQPDVYIYNAVLNI------------AFRKQL--------- 148
           A + F K+ + D       C P V  YN + +              FR+ +         
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS 424

Query: 149 -------------FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
                        F     +   M++ + +P+  T+ LLING  + G+  +A K L+ M 
Sbjct: 425 YKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERML 484

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF----------------- 238
           +   LP    +  ++S L + + A E+    + M D     +                  
Sbjct: 485 KSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRI 544

Query: 239 ---------------VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
                          V    L+   C+  ++ +A  +L    + G    +   + +I+GL
Sbjct: 545 KAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGL 604

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            + KR  EA+  Y  + E+     +     +   L   G+ ++A
Sbjct: 605 CKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEA 648


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 247/519 (47%), Gaps = 38/519 (7%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  +N +L    + + +L A+++  +M       N VT ++LIN     G+   +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L ++ + G  P+  T   ++ GLC      ++     K+   G   D V+Y  LLNG CK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           +     A+ LLR  E     P +  Y+ +IDGL + K  +EAY  Y +M    I PD + 
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I G    G++  A  LL +M  + I P  Y YN LI   C  G + +A++L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K    P   T++ L+ G C  G V +A+++F+ M + G  P+V  +N +I+GLCK   ++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A  L             LR     N V D  +  ++++  C +G I  A  ++ ++   
Sbjct: 308 EAMNL-------------LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   D++TY SL++  CK  N++ A  LF +++ +G++P   TY  LI+GL +  R ++A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY---------------LRD 595
             +F  +   GC      Y  +++  C+   F  A ++  +                +R 
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474

Query: 596 ISGRD--DESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +  +D  D++ K + E + K        GLL +DFK+ D
Sbjct: 475 LFEKDENDKAEKLLHEMIAK--------GLLVLDFKVAD 505



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 49/495 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P I+ F+ ++  L+K  +   AI +  +M  +GI  N  T  I+I+  C + +   ++ +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             K+   G  PD +  N L+ G C    V ++L         GF     SY  L++GL +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                 A    R + +    P+VV+Y  +I GL +   V +A  L S+M  RGI PD   
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI GFC LG L  A SL  E+  ++  P  + + ILI  +C+ G V +A+ L   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           K G  P V  ++ L+DG C  GE++ A  +F+ M ++G NP ++              S 
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVY--------------SY 293

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             M+   C    + +A  +L ++     +PD +TYNSLI+G CK G I  AL L  E+  
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G   D VTY +L++ L +    + A  +F +M + G  P+   Y +L+   C+      
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK------ 407

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
                        GR   + +  +  L KG                    +  YT+ + G
Sbjct: 408 ------------GGRLKNAQELFQHLLVKGCC----------------IDVWTYTVMISG 439

Query: 645 LCQDGQVKEALNIFS 659
           LC++G   EAL I S
Sbjct: 440 LCKEGMFDEALAIKS 454



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 225/460 (48%), Gaps = 15/460 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +G    +    GK+ +   QPD    N ++     K     +L  + ++V  
Sbjct: 50  ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ 109

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               + V++  L+NGL K G+T  A+K+L  +  R   PN   Y  +I GLC+    +EA
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           Y L+ +M   G  PD + Y  L+ GFC L ++  A +LL         P +  Y+ LI+ 
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +     EA      M +E I+P VV Y  ++ G    G+V++A ++   M + G+ P+
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            Y YN +I G C    +D+A +L  E+  ++ +P+T T+  LI G+C++G +  A  L N
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G    V  + +L+D LCK   L+KA  LF KM E G  PT++             
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY------------- 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  C  G +  A ++   L   G   D+ TY  +I+G CK G  + AL +  +
Sbjct: 397 -TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSK 455

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           ++  G  P++VT+  +I  L   D  + A ++  +M   G
Sbjct: 456 MEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 245/538 (45%), Gaps = 51/538 (9%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P    +  ++  L ++ +   A  L  +M+  G   +FV  N L+N FC L ++  + ++
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           L    K G+ P   + + L+ GL       ++  ++ K+  +  + D V YG ++ GL +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ + A+KLL  + +R   P+   YN +I G C   L+++A  L  E+  R   P+  T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKM 439
           +T LI G C  G +  A  L ++M      P V ++N LI+ LCK G +++A NLL    
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G  P +               +  T+++ YC  G +  A +I   + + G  P++ +Y
Sbjct: 248 KEGIKPGV--------------VTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N +ING CK   ++ A+ L +E+  K + PD+VTY +LI+GL +  R   A  +  +M  
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G       Y SL+   C+ +    A +L+++            MK           E  
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMK------------MK-----------ERG 390

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
           IQ             +  YT  + GLC+ G++K A  +F  L+     +   +   +I G
Sbjct: 391 IQP-----------TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           LCK G  D A+ +      NG I        ++RSL    +N K  A  LL  M + G
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK--AEKLLHEMIAKG 495



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 176/353 (49%), Gaps = 4/353 (1%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRK 146
           E RS   +VV  ++  +I G  K     +A + + +M      PD   Y  ++       
Sbjct: 142 EDRSTRPNVV--MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLG 199

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           QL + A ++  EM+  N  P +  +++LIN L K G  + A  +L  MT+ GI P   TY
Sbjct: 200 QL-MGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTY 258

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           + ++ G C +     A ++F  M   G +P+  +YN ++NG CK +RVDEA+ LLR    
Sbjct: 259 STLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 318

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
              VP   +Y+ LIDGL ++ R   A     +M       DVV Y  ++  L +   +  
Sbjct: 319 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A  L   M+ERGI P  Y Y ALI G C  G L  A+ L   +  +    +  T+T++I 
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 438

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G+C+ GM D+A  + +KME  GC P+   F  +I  L +  E +KA  L ++M
Sbjct: 439 GLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 168/331 (50%), Gaps = 4/331 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            +DLY     E+ +  +   +  +  LI G+  +G    A     +M   +  P VYIYN
Sbjct: 169 AYDLY----SEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYN 224

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            ++N   ++     A  +   M K    P +VT+S L++G    G+ + A ++   M Q 
Sbjct: 225 ILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM 284

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ PN ++Y I+I+GLC+  R DEA  L  +M      PD V YN+L++G CK  R+  A
Sbjct: 285 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 344

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L L+      G    + +Y+ L+D L + +  D+A A + KM E  I+P +  Y  +I G
Sbjct: 345 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 404

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           L + G++K+A +L   +  +G   D + Y  +I G C  G+ D+A +++ ++     +PN
Sbjct: 405 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 464

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             TF I+I  +      D A+KL ++M   G
Sbjct: 465 AVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + +I+ L K    D     L E+   N+   +  +  LI G  K G    AL    +M
Sbjct: 292 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                  DV  Y ++L+   + Q    A A++ +M +    P + T++ LI+GL K G+ 
Sbjct: 352 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 411

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A ++   +  +G   + +TYT++ISGLC+    DEA  +  KM+D+GC P+ V +  +
Sbjct: 412 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFV 270
           +    +    D+A  LL      G +
Sbjct: 472 IRSLFEKDENDKAEKLLHEMIAKGLL 497


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/604 (26%), Positives = 287/604 (47%), Gaps = 66/604 (10%)

Query: 6   NEVLTILDTVTPIEPALEPL-----LPFLSKTTVTSVIM--------KTKNPQVGFRFFI 52
           +EVL +L ++T    AL         P +  TT T   M        K ++    F F  
Sbjct: 90  DEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQ 149

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
               R+ L ++ +    +S+     G       L+++R     + +  +  LI    + G
Sbjct: 150 KKIIRRDLDTYLTIFKALSI---RGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSG 206

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
            C +ALE + +M     +P +  Y+A++    +K+   + + +  EM  L   PN+ TF+
Sbjct: 207 FCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFT 266

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           + I  L ++GK + A ++   M   G  P+  TYT++I  LC   + + A  LF+KMK +
Sbjct: 267 ICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN 326

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  PD V Y  LL+ F     +D         E DG++P + +++ L+D L +A+ +DEA
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY------ 346
           +A +  M ++ I P++  Y  +I GL  AG+++DA+KLL  M   G+ P  Y Y      
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446

Query: 347 -----------------------------NALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                                        NA +    ++G L +A+++   + +    P+
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
           + T+ +++    + G VD+A  L ++M + GC P V + N+LID L KAG +++A  +F 
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 438 KMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M+  K +PT+               +  T++      G + KA ++   +      P+ 
Sbjct: 567 RMKDMKLSPTV--------------VTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           I++N+L++ FCK   +  ALK+F ++ +   +PD +TY T+I GL + ++   AF  F Q
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 557 MPQN 560
           + ++
Sbjct: 673 LKKS 676



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/586 (26%), Positives = 266/586 (45%), Gaps = 59/586 (10%)

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           AV+  M K     ++ T+  +   LS  G       +L++M + G + N ++Y  +I  L
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            Q     EA  ++ +M   G  P    Y+AL+    K R  +  + LL+  E  G  P +
Sbjct: 203 IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNV 262

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++  I  L RA + DEAY  +R+M +E   PD+V Y V+I  L  AG++++A +L   
Sbjct: 263 YTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVK 322

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M+  G  PD   Y  L+  F D G LD  +    ++     +P+  TFTIL+  +C+   
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLS 452
            D+A   F+ M K G  P++  +N LI GL +AG +E A  L   ME +G  PT +  + 
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYI- 441

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                        T ++ +  +G   KA +   ++   G +P+I+  N+ +    ++G +
Sbjct: 442 -------------TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRL 488

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F  L+  GL PDSVTY  ++    +V + ++A  +  +M +NGC P   V  SL
Sbjct: 489 REAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSL 548

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
                                             I+   + G V+ A Q    M  ++ D
Sbjct: 549 ----------------------------------IDSLYKAGRVDEAWQ----MFDRMKD 570

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
            +L+P    Y   L GL ++G+V++A+ +F  ++  K      S   L+   CK   ++L
Sbjct: 571 MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVEL 630

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           A+ +F  +       +P V  Y        K+NK  HA+    ++K
Sbjct: 631 ALKMF--SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 176/696 (25%), Positives = 306/696 (43%), Gaps = 47/696 (6%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            ++  L+  +   GD +   E + +M+     PDV  +  ++++  + + F  A A +  M
Sbjct: 334  IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             K   LPN+ T++ LI GL ++G+ E A+K+LD M   G+ P  +TY   I    +    
Sbjct: 394  RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             +A   F KMK  G  P+ VA NA L    ++ R+ EA  +     ++G  P   +Y+ +
Sbjct: 454  GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            +    +  + DEA     +M     EPDV++   +I  L +AG+V +A ++   M++  +
Sbjct: 514  MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P    YN L+ G    G + +A  L   +  +   PNT +F  L+   C+N  V+ A K
Sbjct: 574  SPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALK 633

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP------TLFLRLSQ 453
            +F+KM    C P V  +N +I GL K  ++  A   F++++   +P      TL   L +
Sbjct: 634  MFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVK 693

Query: 454  GGNRVHDKASL-------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
             G ++ D  S+             ++  E      L+       +  AE   L  I   +
Sbjct: 694  CG-QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICRED 752

Query: 501  S----LINGFCKVGNINGALKLFKELQLK-GLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            S    L+   CK      A ++F +   K G+ P   +Y  LI  L  V   E A+ +F 
Sbjct: 753  SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 556  QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
             M   GC P    +  L+    +  K +  F L+ + +      D  +   +   L K  
Sbjct: 813  DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKS- 871

Query: 616  VENAIQGLLEMDFKL--NDFQLAP--YTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVT 669
              N +   L+  + L  +DF+  P  Y   + GL + G+++EA+ +F  + +  CK    
Sbjct: 872  --NNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK---- 925

Query: 670  PPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
             P+C     LI+G  K G  + A  +F   +  G  +RP + +Y +         +   A
Sbjct: 926  -PNCAIFNILINGYGKIGDTETACQLFKRMVNEG--IRPDLKSYTILVDCLCLAGRVDEA 982

Query: 727  YHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
             +    +KS G D D   Y +   ++ G   ++ ME
Sbjct: 983  LYYFNELKSTGLDPDFIAYNR---IINGLGKSQRME 1015



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 241/583 (41%), Gaps = 88/583 (15%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    D  WQ  D ++   +S     +  L+SG  K G  +KA+E F  M  
Sbjct: 546  NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              C P+   +N +L+   +     LAL ++ +M  ++C P+++T++ +I GL K  K   
Sbjct: 606  KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNH 665

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLC---QINRADEAYRLFLKMKDSGCSPDF----- 238
            A     ++ ++ + P+  T   ++ GL    QI  A    R F+       +  F     
Sbjct: 666  AFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724

Query: 239  --------------VAYNALLNG--------------FCKLRRVDEALALLRSFEKD-GF 269
                           A   +LNG               CK +R   A  +   F K  G 
Sbjct: 725  GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784

Query: 270  VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
             P L SY+CLI  L      ++A+  ++ M      PD   + +++    ++GK+ +  +
Sbjct: 785  SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  +M  R   PD   YN +I        LD+A     ++   D  P   T+  LI G+ 
Sbjct: 845  LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
            + G +++A +LF +M   GC P+  +FN LI+G  K G+ E A  LF +M   G  P   
Sbjct: 905  KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRP--- 961

Query: 449  LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                       D  S   +V+  C AG + +A     +L  +G  PD I YN +ING  K
Sbjct: 962  -----------DLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010

Query: 509  -----------------------------------VGNINGALKLFKELQLKGLRPDSVT 533
                                                G +  A ++++ELQL GL PD  T
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070

Query: 534  YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            Y  LI G    +  E A+ ++  M  +GC P+   Y  L   S
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 173/704 (24%), Positives = 304/704 (43%), Gaps = 95/704 (13%)

Query: 32   TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
            T +  V+ K ++    F  F    K+  L +  + + +I  LL+    +   + LD + S
Sbjct: 371  TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK-------------------------- 125
              V   +  +   I  + K G+  KA+E+F KMK                          
Sbjct: 431  VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 126  ---------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
                     E    PD   YN ++    +      A+ +  EM++  C P+++  + LI+
Sbjct: 491  AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550

Query: 177  GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
             L K+G+ + A +M D M    + P   TY  ++SGL +  R  +A  LF  M    CSP
Sbjct: 551  SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSP 610

Query: 237  DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
            + +++N LL+ FCK   V+ AL +          P + +Y+ +I GL +  + + A+ W+
Sbjct: 611  NTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF-WF 669

Query: 297  RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD-MRERGIVPDTYCYNALIKGFCD 355
                ++ + PD V    ++ GL + G++ DA+ +  D M +     +   +  L+ G   
Sbjct: 670  FHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLV 729

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTI-LICGMCRNGMVDDAQKLFNKM-EKAGCFPSV 413
               +D+A     E+   + +    +F I L+  +C++     A ++F+K  +K G  P++
Sbjct: 730  EAEMDKAIIFAEELV-LNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788

Query: 414  GMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
              +N LI  L +    EKA  LF  M+ +G  P  F              +   ++  + 
Sbjct: 789  ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAF--------------TFNMLLAVHG 834

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             +G I + +++  ++      PD ITYN +I+   K  N++ AL  F +L     RP   
Sbjct: 835  KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894

Query: 533  TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
            TYG LI+GL +V R E+A R+F +M   GC P+ A++  L                    
Sbjct: 895  TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL-------------------- 934

Query: 593  LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
                          I  + + G+ E A Q    M  +     L  YTI +  LC  G+V 
Sbjct: 935  --------------INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980

Query: 653  EALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVF 693
            EAL  F+   E K+    P  +   ++I+GL K   ++ A+ ++
Sbjct: 981  EALYYFN---ELKSTGLDPDFIAYNRIINGLGKSQRMEEALALY 1021



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 167/318 (52%), Gaps = 1/318 (0%)

Query: 37   VIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS 95
            V+ K K     ++ F    K+  +  + AS + +I  LL+ +  +  W    ++++   +
Sbjct: 761  VLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCA 820

Query: 96   VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
              +  F +L++ + K G   +  E + +M    C+PD   YN V++   +      AL  
Sbjct: 821  PDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880

Query: 156  YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            +Y++V  +  P   T+  LI+GL+K G+ E A+++ +EM+  G  PN   + I+I+G  +
Sbjct: 881  FYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGK 940

Query: 216  INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            I   + A +LF +M + G  PD  +Y  L++  C   RVDEAL      +  G  P   +
Sbjct: 941  IGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIA 1000

Query: 276  YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            Y+ +I+GL +++R +EA A Y +M    I PD+  Y  ++  L  AG V+ A ++  +++
Sbjct: 1001 YNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ 1060

Query: 336  ERGIVPDTYCYNALIKGF 353
              G+ PD + YNALI+G+
Sbjct: 1061 LAGLEPDVFTYNALIRGY 1078



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 188/432 (43%), Gaps = 20/432 (4%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+  L    KV+D   +   M+++ I  D   Y  + K     G L Q  ++  ++ K  
Sbjct: 128 MLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            + N +++  LI  + ++G   +A +++ +M   G  PS+  ++AL+  L K  + E   
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247

Query: 434 LLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           +L  +ME +G  P ++              +    +     AG I +AY+I  ++ + G 
Sbjct: 248 VLLKEMEDLGLRPNVY--------------TFTICIRVLGRAGKIDEAYEIFRRMDDEGC 293

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD++TY  LI+  C  G +  A +LF +++  G +PD V Y TL++       + D F+
Sbjct: 294 GPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFG-DLDTFK 352

Query: 553 IF-GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDISGRDDESMKSIEEF 610
            F  QM  +G  P    +  L+   C+ R F  AF+ + +   + I          I   
Sbjct: 353 EFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGL 412

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L+ G +E+A++ L  M+          Y  ++    + G+  +A+  F  +     +   
Sbjct: 413 LRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNI 472

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +C   ++ L + G L  A  +F    +NG  L P    Y +    +SK  +   A +LL
Sbjct: 473 VACNASLYSLAEMGRLREAKTMFNGLRENG--LAPDSVTYNMMMKCYSKVGQVDEAVNLL 530

Query: 731 CRMKSVGYDLDA 742
             M   G + D 
Sbjct: 531 SEMIRNGCEPDV 542


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 219/430 (50%), Gaps = 14/430 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I GY KVG  +  +  F +MK   C+PDV  YN+++N   +       L  Y EM +  
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+V++S L++   K    + AIK   +M + G +PN+FTYT ++   C+I    +A+
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAF 293

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           RL  +M + G   + V Y AL++G C   R+ EA  L       G +P L SY+ LI G 
Sbjct: 294 RLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGF 353

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +AK  D A     ++    I+PD++LYG  I GL    K++ A  ++++M+E GI  +T
Sbjct: 354 VKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANT 413

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  L+  +   G   +   L  E+ + D      TF +LI G+C+N +V  A   F +
Sbjct: 414 LIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGR 473

Query: 404 MEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           M    G  P+  ++ A+IDGLCK  +++ A             TLF +++Q G  V D+ 
Sbjct: 474 MSNDFGLQPNAAVYTAMIDGLCKENQVKAAT------------TLFEQMAQEG-LVPDRT 520

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++++     G + +A  +  ++AE G   D++ Y SL+ GF +   +  A    +E+
Sbjct: 521 AYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580

Query: 523 QLKGLRPDSV 532
             + + PD V
Sbjct: 581 IGEEILPDEV 590



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 245/515 (47%), Gaps = 27/515 (5%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FD  W T +    G   V   +F VLI     +G  E+A + F KMK F   P     N 
Sbjct: 49  FDELWSTRNVCVPG-FGVFDALFSVLID----LGMLEEATQCFSKMKRFRVFPKTRSCNG 103

Query: 139 VLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
           +L+  F K      +  ++ +M+     P + T++++I+ + K G  E A  + +EM  R
Sbjct: 104 LLH-KFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G++P+  TY  +I G  ++ R D+    F +MK   C PD + YN+L+N FCK  ++ + 
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L   R  ++ G  P + SYS L+D   +     +A  +Y  M      P+   Y  ++  
Sbjct: 223 LEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDA 282

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G + DA +L ++M E G+  +   Y ALI G CD   + +A  L  ++     +PN
Sbjct: 283 NCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPN 342

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             ++  LI G  +   +D A +L N+++  G  P + ++   I GLC   ++E A ++  
Sbjct: 343 LASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMN 402

Query: 438 KME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +M+   I  N  ++                 T+++ Y  +G   +   +L ++ E  +  
Sbjct: 403 EMQENGIKANTLIYT----------------TLMDAYFKSGNPTEGLHLLEEMQELDHEV 446

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLK-GLRPDSVTYGTLINGLQRVDREEDAFRI 553
            ++T+  LI+G CK   ++ A+  F  +    GL+P++  Y  +I+GL + ++ + A  +
Sbjct: 447 TVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTL 506

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           F QM Q G  P    Y SLM  + ++     A +L
Sbjct: 507 FEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALAL 541



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 244/511 (47%), Gaps = 25/511 (4%)

Query: 55  AKRKRLRSFASNSAVISMLLK------PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           +K KR R F    +   +L K       +G   +++  D + +G+   V   + ++I   
Sbjct: 87  SKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK--DMIGAGSKPTVF-TYNIMIDCM 143

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +K GD E A   F +MK     PD   YN++++   +       +  + EM  ++C P++
Sbjct: 144 WKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDV 203

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T++ LIN   KSGK    ++   EM Q G+ PN  +Y+ ++   C+ +   +A + ++ 
Sbjct: 204 ITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVD 263

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+  G  P+   Y +L++  CK+  + +A  L     + G    + +Y+ LIDGL  A+R
Sbjct: 264 MRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAER 323

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA   + KM    + P++  Y  +I G  +A  +  A++LL++++ RGI PD   Y  
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            I G C L  ++ A+ +  E+ +     NT  +T L+    ++G   +   L  +M++  
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQT 466
              +V  F  LIDGLCK   + KA   F +M  + G  P              + A    
Sbjct: 444 HEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQP--------------NAAVYTA 489

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           M++  C    +  A  +  Q+A+ G +PD   Y SL++G  K GN+  AL L  ++   G
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           ++ D + Y +L+ G  + ++ + A     +M
Sbjct: 550 MKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 219/496 (44%), Gaps = 38/496 (7%)

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           VP  G +  L   L      +EA   + KM   ++ P       ++   ++ GK     +
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
              DM   G  P  + YN +I      G ++ AR L  E+  R  +P+T T+  +I G  
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G +DD    F +M+   C P V  +N+LI+  CK+G+L K  L FY+           
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG-LEFYR----------- 227

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            + Q G +  +  S  T+V+ +C   ++ +A K  + +   G++P+  TY SL++  CK+
Sbjct: 228 EMKQSGLKP-NVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKI 286

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN++ A +L  E+   G+  + VTY  LI+GL   +R ++A ++FG+M   G  P+ A Y
Sbjct: 287 GNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASY 346

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE-----------SMKSIEEFLQKGEVEN 618
            +L+    + +    A    L+ L ++ GR  +            +  +E+      V N
Sbjct: 347 NALIHGFVKAKNMDRA----LELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMN 402

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            +Q   E   K N      YT  +    + G   E L++   + E    VT  +   LI 
Sbjct: 403 EMQ---ENGIKANTL---IYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLID 456

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           GLCK   +  A+D F   + N F L+P    Y        K+N+   A  L  +M   G 
Sbjct: 457 GLCKNKLVSKAIDYF-GRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515

Query: 739 DLDACLYPKTKSLLPG 754
             D   Y    SL+ G
Sbjct: 516 VPDRTAY---TSLMDG 528



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 9/286 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  LI G+ K  + ++ALE   ++K    QPD+ +Y   +      +    A  V  EM 
Sbjct: 346 YNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ 405

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     N + ++ L++   KSG     + +L+EM +        T+ ++I GLC+     
Sbjct: 406 ENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVS 465

Query: 221 EAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +A   F +M  D G  P+   Y A+++G CK  +V  A  L     ++G VP   +Y+ L
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG  +     EA A   KM E  ++ D++ Y  ++ G S+  +++ A   L +M    I
Sbjct: 526 MDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEI 585

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR--------DSLPN 377
           +PD      ++K   +LG +D+A  LQ  + K         ++LPN
Sbjct: 586 LPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNALPN 631



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 147/330 (44%), Gaps = 18/330 (5%)

Query: 368 EIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           E+W   ++  P    F  L   +   GM+++A + F+KM++   FP     N L+    K
Sbjct: 51  ELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAK 110

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G+ +     F  M   G  PT+F              +   M++     G I  A  + 
Sbjct: 111 LGKTDGVKRFFKDMIGAGSKPTVF--------------TYNIMIDCMWKEGDIEAARGLF 156

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++   G +PD +TYNS+I+G+ KVG ++  +  F+E++     PD +TY +LIN   + 
Sbjct: 157 EEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKS 216

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +       + +M Q+G  P+   Y +L+   C+      A   ++   R     ++ + 
Sbjct: 217 GKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTY 276

Query: 605 KS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            S ++   + G + +A +   EM     ++ +  YT  + GLC   ++KEA  +F  +V 
Sbjct: 277 TSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVT 336

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              I    S   LIHG  K   +D A+++ 
Sbjct: 337 AGVIPNLASYNALIHGFVKAKNMDRALELL 366



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 60/126 (47%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  +I G  K    + A   F +M +    PD   Y ++++   ++   L ALA+  +M
Sbjct: 486 VYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKM 545

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++    +++ ++ L+ G S+  + + A   L+EM    ILP++     V+    ++   
Sbjct: 546 AEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCI 605

Query: 220 DEAYRL 225
           DEA  L
Sbjct: 606 DEAVGL 611


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 239/516 (46%), Gaps = 49/516 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA    L +   F LY + +   R   V   +  F V      ++G  ++AL     M  
Sbjct: 131 SASQGGLPRARRFALYRRMVHRDR---VPPTTFTFGVAARALCRLGRADEALALLRGMAR 187

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD  +Y  V++    +     A  +  EM+ + C  ++ TF  ++ G+   G+   
Sbjct: 188 HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE 247

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA------------------------ 222
           A +++D M  +G +P   TY  ++ GLC++ +ADEA                        
Sbjct: 248 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLA 307

Query: 223 -------YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                    L+  M   GC PD   Y+ L++G CKL R+  A+ LLR  EK GF P + +
Sbjct: 308 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 367

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ ++    +   +D+  A   +M  + +  +   Y  MI  L + G++ +AM L+ +MR
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G  PD   YN +I   C+   +++A  +   + +   + N  T+  +I  + R+G   
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           DA +L  +M   GC   V  +N LI  +CK G ++++ +L  +M E G  P         
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP--------- 538

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  S   ++ + C    +  A ++  Q+   G  PDI+TYN+LING CK+G ++ 
Sbjct: 539 -----NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHA 593

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           AL L ++L  + + PD +TY  LI+   +V   +DA
Sbjct: 594 ALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 221/453 (48%), Gaps = 30/453 (6%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           ALA+   M +  C+P+ V +  +I+ L   G    A  +L+EM   G   +  T+  V+ 
Sbjct: 178 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 237

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G+C + R  EA RL  +M   GC P  + Y  LL G C++R+ DEA A+L      G VP
Sbjct: 238 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML------GRVP 291

Query: 272 RLGS--YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            L    ++ +I G     +  EA   Y  M  +  +PD   Y +++ GL + G++  A++
Sbjct: 292 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 351

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL +M ++G  P+   Y  ++  FC  G+ D  R+L  E+  +    N+  +  +I  +C
Sbjct: 352 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 411

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------EI 441
           ++G +D+A  L  +M   GC P +  +N +I  LC   ++E+A  +F  +         I
Sbjct: 412 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 471

Query: 442 GKNPTLFLRLSQGGNR----------VH----DKASLQTMVEQYCTAGLIHKAYKILMQL 487
             N  +   L  G  +          +H    D  S   +++  C  G + ++  +L ++
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           AE G  P+ ++YN LI+  CK   +  AL+L K++  +GL PD VTY TLINGL ++   
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
             A  +  ++      P    Y  L++W C+ R
Sbjct: 592 HAALNLLEKLHNENVHPDIITYNILISWHCKVR 624



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 218/458 (47%), Gaps = 27/458 (5%)

Query: 154 AVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           A+Y  MV  + +P    TF +    L + G+ + A+ +L  M + G +P+   Y  VI  
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 203

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC      EA  L  +M   GC+ D   ++ ++ G C L RV EA  L+      G +P 
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 263

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y  L+ GL R ++ DEA    R M     E +VVL+  +I G    GK+ +A +L  
Sbjct: 264 VMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYE 319

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M  +G  PD + Y+ L+ G C LG +  A  L  E+ K+   PN  T+TI++   C+NG
Sbjct: 320 TMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 379

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP------ 445
           M DD + L  +M   G   +   +N +I  LCK G +++A  L  +M   G NP      
Sbjct: 380 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 439

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAG------LIHK---------AYKILMQLAES 490
           T+   L         +   + ++E+   A       +IH          A ++  ++   
Sbjct: 440 TIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILH 499

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   D+++YN LI   CK GN++ +L L +E+  KG++P++V+Y  LI+ L +  R  DA
Sbjct: 500 GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDA 559

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             +  QM   G  P    Y +L+   C+      A +L
Sbjct: 560 LELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 597



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 221/495 (44%), Gaps = 51/495 (10%)

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           + P  FT+ +    LC++ RADEA  L   M   GC PD V Y  +++  C    V EA 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL      G    + ++  ++ G+    R  EA     +M  +   P V+ YG +++GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
               +  +A  +L  + E  +V     +N +I G    G L +A  L   +  +   P+ 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           HT++IL+ G+C+ G +  A +L  +MEK G  P+V  +  ++   CK G  +    L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M   K  TL    SQG N          M+   C  G + +A  ++ ++   G  PDI +
Sbjct: 391 MS-AKGLTLN---SQGYN---------GMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 437

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN++I   C    +  A  +F+ L  +G+  + +TY T+I+ L R  R +DA R+  +M 
Sbjct: 438 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 497

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
            +GC+     Y  L+   C+                   G  D S+  +EE  +KG   N
Sbjct: 498 LHGCSLDVVSYNGLIKAMCK------------------DGNVDRSLVLLEEMAEKGIKPN 539

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            +                 Y I +  LC++ +V++AL +   ++         +   LI+
Sbjct: 540 NVS----------------YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLIN 583

Query: 679 GLCKRGYLDLAMDVF 693
           GLCK G++  A+++ 
Sbjct: 584 GLCKMGWMHAALNLL 598



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 179/370 (48%), Gaps = 3/370 (0%)

Query: 87  DELRS--GNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           DE R+  G V  ++ V F  +I G    G   +A E +  M    CQPD + Y+ +++  
Sbjct: 281 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 340

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      A+ +  EM K    PN+VT++++++   K+G  +    +L+EM+ +G+  N 
Sbjct: 341 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 400

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             Y  +I  LC+  R DEA  L  +M+  GC+PD  +YN ++   C   +++EA  +  +
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 460

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             ++G V    +Y+ +I  L R  R+ +A    ++M       DVV Y  +I+ + + G 
Sbjct: 461 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 520

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V  ++ LL +M E+GI P+   YN LI   C    +  A  L  ++  +   P+  T+  
Sbjct: 521 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 580

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G+C+ G +  A  L  K+      P +  +N LI   CK   L+ A +L  +     
Sbjct: 581 LINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAV 640

Query: 444 NPTLFLRLSQ 453
            P    R+ Q
Sbjct: 641 CPVGDRRIMQ 650



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 199/450 (44%), Gaps = 28/450 (6%)

Query: 282 GLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           GL RA+R+    A YR+M   +++ P    +GV  R L   G+  +A+ LL  M   G V
Sbjct: 136 GLPRARRF----ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV 191

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y  +I   CD G + +A +L  E+       + +TF  ++ GMC  G V +A +L
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARL 251

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKA----------GELEKANLLFYKMEIG-------- 442
            ++M   GC P V  +  L+ GLC+           G + + N++ +   IG        
Sbjct: 252 VDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKL 311

Query: 443 -KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
            +   L+  +   G +  D  +   ++   C  G I  A ++L ++ + G  P+++TY  
Sbjct: 312 AEATELYETMGLKGCQP-DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTI 370

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           +++ FCK G  +    L +E+  KGL  +S  Y  +I  L +  R ++A  +  +M   G
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQG 430

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAI 620
           C P    Y +++   C   +   A  ++   L +    +  +  + I   L+ G  ++A+
Sbjct: 431 CNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAV 490

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           +   EM        +  Y   +  +C+DG V  +L +   + E        S   LI  L
Sbjct: 491 RLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISEL 550

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           CK   +  A+++    L  G  L P +  Y
Sbjct: 551 CKERRVRDALELSKQMLNQG--LAPDIVTY 578



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 141/296 (47%), Gaps = 14/296 (4%)

Query: 61  RSFASNSAVISMLLKP---NG-FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           + FA N    +++L     NG +D     L+E+ +  +++ S  +  +I    K G  ++
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 418

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+    +M+   C PD+  YN ++      +    A  ++  +++   + N +T++ +I+
Sbjct: 419 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 478

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L + G+ + A+++  EM   G   +  +Y  +I  +C+    D +  L  +M + G  P
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V+YN L++  CK RRV +AL L +     G  P + +Y+ LI+GL +      A    
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS----------DMRERGIVPD 342
            K+  E + PD++ Y ++I    +   + DA  LL+          D R   I+PD
Sbjct: 599 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQILPD 654



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 21/282 (7%)

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G   +A  +L  +A  G +PD + Y ++I+  C  G +  A  L  E+ L G   D 
Sbjct: 170 CRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADV 229

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            T+  ++ G+  + R  +A R+  +M   GC P    Y  L+   CR R+   A      
Sbjct: 230 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA------ 283

Query: 592 YLRDISGRDDESM-----KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
             R + GR  E         I   L +G++  A +    M  K        Y+I + GLC
Sbjct: 284 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 341

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           + G++  A+ +   + E K     P+ V    ++H  CK G  D    +       G  L
Sbjct: 342 KLGRIGSAVRLLREM-EKKGFA--PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 398

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             +  N ++ +L   KD +   A  L+  M+S G + D C Y
Sbjct: 399 NSQGYNGMIYAL--CKDGRMDEAMGLIQEMRSQGCNPDICSY 438


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 202/376 (53%), Gaps = 13/376 (3%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +VT++ LI    + G  E A ++++ M  +G+ P+ FTY  +I+GLC+  R   A  + +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M + G SPD   YN LL   C+     EA  +     + G VP L S+S L+    R +
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
             D+A  ++R M +  + PD V+Y V++ G    G + +A+K+  +M E+G V D   YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            ++ G C   +L  A  L  E+ +R +LP+ +TFT LI G C++G +  A  LF  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P +  +N LIDG CK GE+EKA+ L+  M   K   +F           +  +   +
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK---IF----------PNHITYGIL 287

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  YC+ G + +A+++   + E G  P ++T N++I G+C+ G+ + A +    +  KG+
Sbjct: 288 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 347

Query: 528 RPDSVTYGTLINGLQR 543
            PD ++Y TLIN  +R
Sbjct: 348 APDHISYNTLINDGKR 363



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 13/375 (3%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY  +I   C+    +EA+ +   M D G  P    YNA++NG CK  R   A  +L   
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
              G  P   +Y+ L+    R   + EA   + +M  + + PD+V +  ++   S    +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A+    DM++ G+VPD   Y  L+ G+C  G + +A  ++ E+ ++  + +   +  +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           + G+C+  M+ DA KLF++M + G  P    F  LI G C+ G + KA  LF  M     
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM----- 237

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                      N   D  +  T+++ +C  G + KA ++   +      P+ ITY  LIN
Sbjct: 238 --------TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            +C VG+++ A +L+  +  KG++P  VT  T+I G  R      A    G+M   G  P
Sbjct: 290 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 349

Query: 565 SPAVYKSLMTWSCRR 579
               Y +L+    RR
Sbjct: 350 DHISYNTLINDGKRR 364



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 183/370 (49%), Gaps = 15/370 (4%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YN ++    R+ L   A  +   M      P++ T++ +INGL K G+   A  +L EM 
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             G+ P+  TY  ++   C+ +   EA  +F +M   G  PD V++++L+  F + R +D
Sbjct: 64  NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           +AL   R  +K G VP    Y+ L+ G  R     EA     +M E+    DV+ Y  ++
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL +   + DA KL  +M ERG +PD Y +  LI G C  G + +A SL   + +R+  
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+   +  LI G C+ G ++ A +L++ M     FP+   +  LI+  C  G + +A  L
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303

Query: 436 FYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +  M E G  PTL               +  T+++ YC +G   KA + L ++   G  P
Sbjct: 304 WDVMIEKGIKPTL--------------VTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 349

Query: 495 DIITYNSLIN 504
           D I+YN+LIN
Sbjct: 350 DHISYNTLIN 359



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 173/348 (49%), Gaps = 15/348 (4%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN L+  +C+   ++EA  ++ S    G  P L +Y+ +I+GL +  RY  A     +
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M    + PD   Y  ++          +A ++  +M  +G+VPD   +++L+  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           LDQA     ++ K   +P+   +T+L+ G CRNG + +A K+ ++M + GC   V  +N 
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +++GLCK   L  A+ LF +M E G  P  +              +  T++  +C  G +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFY--------------TFTTLIHGHCQDGNM 227

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            KA  +   + +    PDI+ YN+LI+GFCKVG +  A +L+  +  + + P+ +TYG L
Sbjct: 228 TKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 287

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           IN    V    +AFR++  M + G  P+     +++   CR    S A
Sbjct: 288 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA 335



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 171/340 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI  Y + G  E+A E    M +   +P ++ YNA++N   +K  +  A  +  EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           + +   P+  T++ L+    +      A ++  EM ++G++P+  +++ +++   +    
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A   F  MK  G  PD V Y  L++G+C+   + EAL +     + G V  + +Y+ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL + K   +A   + +M E    PD   +  +I G  + G +  A+ L   M +R I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN LI GFC +G +++A  L   +  R   PN  T+ ILI   C  G V +A +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           L++ M + G  P++   N +I G C++G+  KA+    +M
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRM 342



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 159/322 (49%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+G  K G   +A     +M      PD   YN +L  + R+  F  A  ++ EM
Sbjct: 38  TYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEM 97

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++   +P++V+FS L+   S++   + A+    +M + G++P+   YT+++ G C+    
Sbjct: 98  LRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNM 157

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA ++  +M + GC  D +AYN +LNG CK + + +A  L     + G +P   +++ L
Sbjct: 158 LEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTL 217

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +     +A + +  M +  I+PD+V Y  +I G  + G+++ A +L   M  R I
Sbjct: 218 IHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI 277

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y  LI  +C +G + +A  L   + ++   P   T   +I G CR+G    A +
Sbjct: 278 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 337

Query: 400 LFNKMEKAGCFPSVGMFNALID 421
              +M   G  P    +N LI+
Sbjct: 338 FLGRMIAKGVAPDHISYNTLIN 359



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 13/315 (4%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LI    R    +EA+     M ++ ++P +  Y  +I GL + G+   A  +L +M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G+ PDT  YN L+   C      +A+ +  E+ ++  +P+  +F+ L+    RN  +
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           D A   F  M+K G  P   ++  L+ G C+ G + +A  +  +M           L QG
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM-----------LEQG 171

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V D  +  T++   C   ++  A K+  ++ E G LPD  T+ +LI+G C+ GN+  
Sbjct: 172 C--VLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTK 229

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL LF  +  + ++PD V Y TLI+G  +V   E A  ++  M      P+   Y  L+ 
Sbjct: 230 ALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILIN 289

Query: 575 WSCRRRKFSLAFSLW 589
             C     S AF LW
Sbjct: 290 AYCSVGHVSEAFRLW 304



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 167/378 (44%), Gaps = 49/378 (12%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  +I      G +++A ++++ M ++G+ P  + YNA+I G C  G   +A+ + +
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+      P+T T+  L+   CR     +A+++F +M + G  P +  F++L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 428 ELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            L++A + F  M+  G  P              D      ++  YC  G + +A KI  +
Sbjct: 121 HLDQALVYFRDMKKFGLVP--------------DNVIYTVLMHGYCRNGNMLEALKIRDE 166

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + E G + D+I YN+++NG CK   +  A KLF E+  +G  PD  T+ TLI+G  +   
Sbjct: 167 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN 226

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
              A  +FG M Q    P    Y +L+   C+  +   A  LW            + M S
Sbjct: 227 MTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW------------DGMIS 274

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
            + F       N I                 Y I +   C  G V EA  ++ V++E   
Sbjct: 275 RKIF------PNHIT----------------YGILINAYCSVGHVSEAFRLWDVMIEKGI 312

Query: 667 IVTPPSCVKLIHGLCKRG 684
             T  +C  +I G C+ G
Sbjct: 313 KPTLVTCNTVIKGYCRSG 330



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 162/324 (50%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +A+I+ L K   +      L E+ +  +S  +  +  L+    +  +  +A E F
Sbjct: 35  SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 94

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           G+M      PD+  +++++ +  R +    AL  + +M K   +P+ V +++L++G  ++
Sbjct: 95  GEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 154

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A+K+ DEM ++G + +   Y  +++GLC+     +A +LF +M + G  PDF  +
Sbjct: 155 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 214

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             L++G C+   + +AL+L  +  +    P + +Y+ LIDG  +    ++A   +  M  
Sbjct: 215 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            KI P+ + YG++I      G V +A +L   M E+GI P     N +IKG+C  G   +
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 334

Query: 362 ARSLQVEIWKRDSLPNTHTFTILI 385
           A      +  +   P+  ++  LI
Sbjct: 335 ADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++  YC  GL+ +A++I+  +A+ G  P + TYN++ING CK G    A  +  E+
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              GL PD+ TY TL+    R D   +A  IFG+M + G  P    + SLM    R R  
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND--------FQ 634
             A    L Y RD+          I   L  G   N    +LE   K+ D          
Sbjct: 123 DQA----LVYFRDMKKFGLVPDNVIYTVLMHGYCRNG--NMLEA-LKIRDEMLEQGCVLD 175

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF- 693
           +  Y   L GLC++  + +A  +F  +VE  A+    +   LIHG C+ G +  A+ +F 
Sbjct: 176 VIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFG 235

Query: 694 LYTLKNGFILRPRVCNY 710
             T +N   ++P +  Y
Sbjct: 236 TMTQRN---IKPDIVAY 249



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN+LI  +C+ G +  A ++   +  KGL+P   TY  +INGL +  R   A  I  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE-FLQKG 614
           +M   G +P    Y +L+  SCRR  FS A  ++ + LR     D  S  S+   F +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 615 EVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            ++ A+    +M      F L P    YT+ + G C++G + EAL I   ++E   ++  
Sbjct: 121 HLDQALVYFRDM----KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 176

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            +   +++GLCK   L  A  +F   ++ G
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERG 206


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 259/573 (45%), Gaps = 51/573 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TF  ++ GL   G+   A+++LDEM+ +G  P    Y +++   C+      + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC+ D    N +LN  C+   VDEA+ LLR         +L  + C       
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR---------KLAFFGC------- 212

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              E D+V Y  +++GL  A +  D  +L+ +M      P+   
Sbjct: 213 -------------------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N ++ GLC A   ++A  L  +M     P              D  +  
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL-------------DDVTFN 360

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ +C  GL+ +  ++L Q+   G +PD+ITY ++INGFCK G I+ A+ L K +   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P++V+Y  ++ GL    R  DA  +  QM Q GC P+P  + +L+ + C++     A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+     
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L ++G+V + + +F  + +            +I  LCKR   D A+D F Y + NG +  
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
                 L++ L  + +     A  LL  + S G
Sbjct: 601 ESTYTMLIKGL--ASEGLAKEAQELLSELCSRG 631



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 235/491 (47%), Gaps = 15/491 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+     + +  ++ V++    + G    ++     M    C  D    N VLN  
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +     A+ +  ++    C  +IV+++ ++ GL  + +     +++DEM +    PN 
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I  LC+    +  + +  +M + GC+PD   Y  +++G CK   ++ A  +L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  Y+ ++ GL  A+R+ EA     +MF++    D V + +++    + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V   ++LL  M   G +PD   Y  +I GFC  GL+D+A  L   +      PNT ++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-G 442
           ++ G+C  G   DA++L ++M + GC P+   FN LI+ LCK G +E+A  L  +M + G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P L               S  T+++    AG   +A ++L  +   G  P+ I Y+S+
Sbjct: 492 CSPDLI--------------SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                + G +N  +++F  ++   +R D+V Y  +I+ L +    + A   F  M  NGC
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 563 TPSPAVYKSLM 573
            P+ + Y  L+
Sbjct: 598 MPNESTYTMLI 608



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 232/492 (47%), Gaps = 19/492 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           FF ++ G    G    ALE   +M    C P   +Y+ +L  A R   F  ++ V   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C  +    +L++N + + G  + A+ +L ++   G   +  +Y  V+ GLC   R  
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCK---LRRVDEALALLRSFEKDGFVPRLGSYS 277
           +   L  +M    C+P+ V +N L+   C+     RV E LA      + G  P +  Y+
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA---QMSEHGCTPDIRMYA 290

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +IDG+ +    + A     +M    ++P+VV Y  +++GL  A + K+A +LLS+M ++
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
               D   +N L+  FC  GL+D+   L  ++     +P+  T+T +I G C+ G++D+A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             L   M   GC P+   +  ++ GLC AG    A  L  +M           + QG   
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-----------IQQGCP- 458

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  T++   C  GL+ +A ++L Q+  +G  PD+I+Y+++I+G  K G    AL+
Sbjct: 459 -PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +  KG+ P+++ Y ++   L R  R     ++F  +          +Y ++++  C
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 578 RRRKFSLAFSLW 589
           +R +   A   +
Sbjct: 578 KRWETDRAIDFF 589



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 239/507 (47%), Gaps = 22/507 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++    +  GF    + L+ + +   ++ +    ++++   + G  ++A+    K+  F 
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+ D+  YNAVL      + +     +  EMV+++C PNIVTF+ LI  L ++G  E   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L +M++ G  P+   Y  +I G+C+    + A  +  +M   G  P+ V YN +L G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 249 CKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           C   R  EA  LL   F+KD  +  + +++ L+D   +    D       +M      PD
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V+ Y  +I G  + G + +A+ LL  M   G  P+T  Y  ++KG C  G    A  L  
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ ++   PN  TF  LI  +C+ G+V+ A +L  +M   GC P +  ++ +IDGL KAG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 428 ELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           + E+A  LL   +  G +P   +            +S+   + +    G ++K  ++   
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIY-----------SSIACALSR---EGRVNKVIQMFDN 556

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++    D + YN++I+  CK    + A+  F  +   G  P+  TY  LI GL     
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ++A  +  ++   G     A+ K LM
Sbjct: 617 AKEAQELLSELCSRG-----ALRKHLM 638



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  ++ G       ++A E   +M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M+   C+P+++T++ +ING  K G  + 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M+  G  PN  +YTIV+ GLC   R  +A  L  +M   GC P+ V +N L+N
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + +EA      M  + I P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G+V   +++  ++++  I  D   YNA+I   C     D+A    
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+T+LI G+   G+  +AQ+L +++   G
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 182/428 (42%), Gaps = 28/428 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR L  AG+  +A + L+D  +   V     YNA++ G+C  G   Q  + +       
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAG---QLAAARRLAAAVP 106

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN +TF  ++ G+C  G + DA ++ ++M   GC P   M++ +++  C++G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +   M   K  TL            D  +   ++   C  G + +A  +L +LA  G  
Sbjct: 167 RVLEAMH-AKGCTL------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE 213

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            DI++YN+++ G C         +L  E+      P+ VT+ TLI  L R    E    +
Sbjct: 214 ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY----LRDISGRDDESMKSIEE 609
             QM ++GCTP   +Y +++   C+     +A  +  +     L+      +  +K +  
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
             +  E E  +  + + D  L+D     + I +   CQ+G V   + +   ++    +  
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVT---FNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             +   +I+G CK G +D A  V L    +    +P   +Y +         + V A  L
Sbjct: 391 VITYTTVINGFCKEGLIDEA--VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 730 LCRMKSVG 737
           + +M   G
Sbjct: 449 MSQMIQQG 456



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ YN+++ G+C+ G +  A +L   + +    P++ T+  ++ GL    R  DA  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-LWLQYLRDISGRDDESMKSIEEFLQKG 614
           +M   GC P P +Y  ++  +CR   F  +   L   + +  +         +    ++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD---GQVKEALNIFSVLVECKA-IVTP 670
            V+ A+  L ++ F   +  +  Y   L GLC     G V+E ++   V V+C   IVT 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTF 254

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   LI  LC+ G  +   +V     ++G     R+   ++  +   K+     A  +L
Sbjct: 255 NT---LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI--CKEGHLEVANEIL 309

Query: 731 CRMKSVGYDLDACLY 745
            RM S G   +   Y
Sbjct: 310 NRMPSYGLKPNVVCY 324



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  +S  + ++  +     + G   K ++ F  +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K+   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 185 EVAIKMLDEMTQRGIL 200
           + A ++L E+  RG L
Sbjct: 618 KEAQELLSELCSRGAL 633



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 129/372 (34%), Gaps = 54/372 (14%)

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH----------------DK 461
           ALI  LC AG   +A               +  +  G  R                  + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP--------------------------- 494
            +   +V   CT G I  A ++L +++  G  P                           
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 495 --------DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                   D    N ++N  C+ G ++ A+ L ++L   G   D V+Y  ++ GL    R
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             D   +  +M +  C P+   + +L+ + CR   F     +  Q        D     +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I+   ++G +E A + L  M        +  Y   L GLC   + KEA  + S + +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
             +   +   L+   C+ G +D  +++    L +G +  P V  Y      F K+     
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM--PDVITYTTVINGFCKEGLIDE 409

Query: 726 AYHLLCRMKSVG 737
           A  LL  M S G
Sbjct: 410 AVMLLKSMSSCG 421


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 259/573 (45%), Gaps = 51/573 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TF  ++ GL   G+   A+++LDEM+ +G  P    Y +++   C+      + R+
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   GC+ D    N +LN  C+   VDEA+ LLR         +L  + C       
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLR---------KLAFFGC------- 212

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                              E D+V Y  +++GL  A +  D  +L+ +M      P+   
Sbjct: 213 -------------------EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL ++   +  ++ +    P+   +  +I G+C+ G ++ A ++ N+M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N ++ GLC A   ++A  L  +M     P              D  +  
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL-------------DDVTFN 360

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ +C  GL+ +  ++L Q+   G +PD+ITY ++INGFCK G I+ A+ L K +   
Sbjct: 361 ILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC 420

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G +P++V+Y  ++ GL    R  DA  +  QM Q GC P+P  + +L+ + C++     A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+     
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           L ++G+V + + +F  + +            +I  LCKR   D A+D F Y + NG +  
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600

Query: 705 PRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
                 L++ L  + +     A  LL  + S G
Sbjct: 601 ESTYTMLIKGL--ASEGLAKEAQELLSELCSRG 631



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 235/491 (47%), Gaps = 15/491 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+     + +  ++ V++    + G    ++     M    C  D    N VLN  
Sbjct: 132 EVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAI 191

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +     A+ +  ++    C  +IV+++ ++ GL  + +     +++DEM +    PN 
Sbjct: 192 CEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNI 251

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  +I  LC+    +  + +  +M + GC+PD   Y  +++G CK   ++ A  +L  
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNR 311

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  Y+ ++ GL  A+R+ EA     +MF++    D V + +++    + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V   ++LL  M   G +PD   Y  +I GFC  GL+D+A  L   +      PNT ++TI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-G 442
           ++ G+C  G   DA++L ++M + GC P+   FN LI+ LCK G +E+A  L  +M + G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            +P L               S  T+++    AG   +A ++L  +   G  P+ I Y+S+
Sbjct: 492 CSPDLI--------------SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
                + G +N  +++F  ++   +R D+V Y  +I+ L +    + A   F  M  NGC
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGC 597

Query: 563 TPSPAVYKSLM 573
            P+ + Y  L+
Sbjct: 598 MPNESTYTMLI 608



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 232/492 (47%), Gaps = 19/492 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           FF ++ G    G    ALE   +M    C P   +Y+ +L  A R   F  ++ V   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C  +    +L++N + + G  + A+ +L ++   G   +  +Y  V+ GLC   R  
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCK---LRRVDEALALLRSFEKDGFVPRLGSYS 277
           +   L  +M    C+P+ V +N L+   C+     RV E LA      + G  P +  Y+
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLA---QMSEHGCTPDIRMYA 290

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +IDG+ +    + A     +M    ++P+VV Y  +++GL  A + K+A +LLS+M ++
Sbjct: 291 TIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
               D   +N L+  FC  GL+D+   L  ++     +P+  T+T +I G C+ G++D+A
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEA 410

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             L   M   GC P+   +  ++ GLC AG    A  L  +M           + QG   
Sbjct: 411 VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM-----------IQQGCP- 458

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +  T++   C  GL+ +A ++L Q+  +G  PD+I+Y+++I+G  K G    AL+
Sbjct: 459 -PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +  KG+ P+++ Y ++   L R  R     ++F  +          +Y ++++  C
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577

Query: 578 RRRKFSLAFSLW 589
           +R +   A   +
Sbjct: 578 KRWETDRAIDFF 589



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 239/507 (47%), Gaps = 22/507 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++    +  GF    + L+ + +   ++ +    ++++   + G  ++A+    K+  F 
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+ D+  YNAVL      + +     +  EMV+++C PNIVTF+ LI  L ++G  E   
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVH 271

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++L +M++ G  P+   Y  +I G+C+    + A  +  +M   G  P+ V YN +L G 
Sbjct: 272 EVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL 331

Query: 249 CKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           C   R  EA  LL   F+KD  +  + +++ L+D   +    D       +M      PD
Sbjct: 332 CSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V+ Y  +I G  + G + +A+ LL  M   G  P+T  Y  ++KG C  G    A  L  
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ ++   PN  TF  LI  +C+ G+V+ A +L  +M   GC P +  ++ +IDGL KAG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 428 ELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           + E+A  LL   +  G +P   +            +S+   + +    G ++K  ++   
Sbjct: 511 KTEEALELLNVMVNKGISPNTIIY-----------SSIACALSR---EGRVNKVIQMFDN 556

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++    D + YN++I+  CK    + A+  F  +   G  P+  TY  LI GL     
Sbjct: 557 IKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGL 616

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ++A  +  ++   G     A+ K LM
Sbjct: 617 AKEAQELLSELCSRG-----ALRKHLM 638



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 172/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + K    ++  + L+ + S  +      +  ++ G       ++A E   +M +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            DC  D   +N +++   +  L    + +  +M+   C+P+++T++ +ING  K G  + 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L  M+  G  PN  +YTIV+ GLC   R  +A  L  +M   GC P+ V +N L+N
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK   V++A+ LL+    +G  P L SYS +IDGL +A + +EA      M  + I P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + ++Y  +   LS  G+V   +++  ++++  I  D   YNA+I   C     D+A    
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFF 589

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             +     +PN  T+T+LI G+   G+  +AQ+L +++   G
Sbjct: 590 AYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/428 (22%), Positives = 182/428 (42%), Gaps = 28/428 (6%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +IR L  AG+  +A + L+D  +   V     YNA++ G+C  G   Q  + +       
Sbjct: 53  LIRSLCSAGRTAEAARALADAGDAAGV---VAYNAMVAGYCRAG---QLAAARRLAAAVP 106

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN +TF  ++ G+C  G + DA ++ ++M   GC P   M++ +++  C++G    + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +   M   K  TL            D  +   ++   C  G + +A  +L +LA  G  
Sbjct: 167 RVLEAMH-AKGCTL------------DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCE 213

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            DI++YN+++ G C         +L  E+      P+ VT+ TLI  L R    E    +
Sbjct: 214 ADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY----LRDISGRDDESMKSIEE 609
             QM ++GCTP   +Y +++   C+     +A  +  +     L+      +  +K +  
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCS 333

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
             +  E E  +  + + D  L+D     + I +   CQ+G V   + +   ++    +  
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVT---FNILVDFFCQNGLVDRVIELLEQMLSHGCMPD 390

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             +   +I+G CK G +D A  V L    +    +P   +Y +         + V A  L
Sbjct: 391 VITYTTVINGFCKEGLIDEA--VMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 730 LCRMKSVG 737
           + +M   G
Sbjct: 449 MSQMIQQG 456



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ YN+++ G+C+ G +  A +L   + +    P++ T+  ++ GL    R  DA  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-LWLQYLRDISGRDDESMKSIEEFLQKG 614
           +M   GC P P +Y  ++  +CR   F  +   L   + +  +         +    ++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD---GQVKEALNIFSVLVECKA-IVTP 670
            V+ A+  L ++ F   +  +  Y   L GLC     G V+E ++   V V+C   IVT 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTF 254

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   LI  LC+ G  +   +V     ++G     R+   ++  +   K+     A  +L
Sbjct: 255 NT---LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI--CKEGHLEVANEIL 309

Query: 731 CRMKSVGYDLDACLY 745
            RM S G   +   Y
Sbjct: 310 NRMPSYGLKPNVVCY 324



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 67/136 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  +S  + ++  +     + G   K ++ F  +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           K+   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 185 EVAIKMLDEMTQRGIL 200
           + A ++L E+  RG L
Sbjct: 618 KEAQELLSELCSRGAL 633



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/372 (20%), Positives = 129/372 (34%), Gaps = 54/372 (14%)

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH----------------DK 461
           ALI  LC AG   +A               +  +  G  R                  + 
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP--------------------------- 494
            +   +V   CT G I  A ++L +++  G  P                           
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 495 --------DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
                   D    N ++N  C+ G ++ A+ L ++L   G   D V+Y  ++ GL    R
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             D   +  +M +  C P+   + +L+ + CR   F     +  Q        D     +
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I+   ++G +E A + L  M        +  Y   L GLC   + KEA  + S + +  
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
             +   +   L+   C+ G +D  +++    L +G +  P V  Y      F K+     
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM--PDVITYTTVINGFCKEGLIDE 409

Query: 726 AYHLLCRMKSVG 737
           A  LL  M S G
Sbjct: 410 AVMLLKSMSSCG 421


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/617 (25%), Positives = 279/617 (45%), Gaps = 45/617 (7%)

Query: 33   TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RS 91
            TV + +       V   FF WA   ++ R F                 LY  T D L  +
Sbjct: 697  TVVASLASESGSMVALCFFYWAVGFEKFRHF---------------MRLYLVTADSLLAN 741

Query: 92   GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            GN+    +V   ++  + ++G   +A+     M+     P     N VL IA    L   
Sbjct: 742  GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 801

Query: 152  ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            A  V+ EM     +P+  ++ L++ G  + GK + A + L  M QRG +P+  T T++++
Sbjct: 802  AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 861

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             LC+    + A   F KM D G  P+ + + +L++G CK   + +A  +L    ++G+ P
Sbjct: 862  ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 921

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + +++ LIDGL +    ++A+  + K+   +  +P+V  Y  MI G  +  K+  A  L
Sbjct: 922  NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 981

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             S M+E+G+ P+   Y  LI G C  G   +A  L   +     +PN +T+   I  +C+
Sbjct: 982  FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 1041

Query: 391  NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
                 +A +L NK    G       +  LI   CK  ++ +A   F +M    N T F  
Sbjct: 1042 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM----NKTGF-- 1095

Query: 451  LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
              +   R+++      ++  +C    + ++ ++   +   G +P   TY S+I+ +CK G
Sbjct: 1096 --EADMRLNN-----ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 1148

Query: 511  NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +I+ ALK F  ++  G  PDS TYG+LI+GL +    ++A +++  M   G +P      
Sbjct: 1149 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 1208

Query: 571  SLMTWSCRRRKFSLAF--------SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            +L    C+R   + A          LW++ +R +       ++ +    + G      Q 
Sbjct: 1209 TLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTL-------VRKLCSEKKVGVAALFFQK 1261

Query: 623  LLEMDFKLNDFQLAPYT 639
            LLE D   +   LA +T
Sbjct: 1262 LLEKDSSADRVTLAAFT 1278



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 209/465 (44%), Gaps = 58/465 (12%)

Query: 244  LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            +L  F ++ R++EA+ ++   +  G  P   + +C+++        + A   + +M    
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 304  IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            + PD   Y +M+ G    GK+++A + L+ M +RG +PD      ++   C+ GL+++A 
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA- 872

Query: 364  SLQVEIWKRDSL------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
                 IW    +      PN   FT LI G+C+ G +  A ++  +M + G  P+V    
Sbjct: 873  -----IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 927

Query: 418  ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            ALIDGLCK G  EKA  LF K+         +R       VH   +  +M+  YC    +
Sbjct: 928  ALIDGLCKRGWTEKAFRLFLKL---------VRSDTYKPNVH---TYTSMIGGYCKEDKL 975

Query: 478  HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            ++A  +  ++ E G  P++ TY +LING CK G+   A +L   +  +G  P+  TY   
Sbjct: 976  NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 1035

Query: 538  INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
            I+ L +  R  +A+ +  +    G       Y  L+   C++   + A + + +  +  +
Sbjct: 1036 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK--T 1093

Query: 598  GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            G                          E D +LN+  +A +       C+  ++KE+  +
Sbjct: 1094 G-------------------------FEADMRLNNILIAAF-------CRQKKMKESERL 1121

Query: 658  FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            F ++V    I T  +   +I   CK G +DLA+  F    ++G +
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 1166



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 151/362 (41%), Gaps = 52/362 (14%)

Query: 388  MCRN----GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
            M RN    G +++A  +   M+  G  PS    N +++   + G +E A  +F +M +  
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR- 812

Query: 444  NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                          V D +S + MV      G I +A + L  + + G +PD  T   ++
Sbjct: 813  ------------GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 860

Query: 504  NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
               C+ G +N A+  F+++   G +P+ + + +LI+GL +    + AF +  +M +NG  
Sbjct: 861  TALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 920

Query: 564  PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
            P+   + +L+   C+R     AF L+L+ +R  +                          
Sbjct: 921  PNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT-------------------------- 954

Query: 624  LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                +K N   +  YT  + G C++ ++  A  +FS + E        +   LI+G CK 
Sbjct: 955  ----YKPN---VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA 1007

Query: 684  GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
            G    A ++       GF+      N  + SL   K ++   AY LL +  S G + D  
Sbjct: 1008 GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC--KKSRAPEAYELLNKAFSCGLEADGV 1065

Query: 744  LY 745
             Y
Sbjct: 1066 TY 1067


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 173/736 (23%), Positives = 321/736 (43%), Gaps = 23/736 (3%)

Query: 14  TVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR-KRLRSFASNSAVISM 72
           +  P+ P  E  +  +   +V  ++    +P      F  AA++  ++ +  S + ++ +
Sbjct: 53  SAPPVPPRDERRV--VGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLEL 110

Query: 73  LLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           +          Q  D ++   V      F  +  G    G    A  +   M+E     +
Sbjct: 111 MRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLN 170

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
            Y YN ++    +      A+ VY  MV+    P++ T+S+L+    K    +  + +L+
Sbjct: 171 AYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLN 230

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM  RG+ PN ++YTI I  L Q  R DEAY +  KM+DSGC PD V +  ++   C   
Sbjct: 231 EMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAG 290

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+ +A A+    +     P   +Y  L+D    +         +  M  +    ++V Y 
Sbjct: 291 RLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYT 350

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++  L + G+V +A+ +  +M+E+G+ P+ Y YN+LI GF    + D+A  L   +   
Sbjct: 351 AVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNAC 410

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN +T  + I    ++G    A + +  M+  G  P V   NA++  L  +G L  A
Sbjct: 411 GPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMA 470

Query: 433 NLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             +FY+++ +G +P              D  +   M++    A    +A      + ESG
Sbjct: 471 KRVFYELKAMGVSP--------------DTITYTMMIKCCSKASKADEAMNFFSDMVESG 516

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            +PD++  NSLI+   K G  N A +LF +L+   + P + TY TL++GL R  + ++  
Sbjct: 517 CVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 576

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           ++  +M +    P+   Y +++    +  + + A  +           D  S  ++   L
Sbjct: 577 QLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGL 636

Query: 612 QKGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN-IFSVLVECKAIVT 669
            K E +E A +   +M  K+     A     L    ++G +KEAL+ +   +++    V 
Sbjct: 637 IKEERLEEAFRMFCQMK-KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVD 695

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             S   L+ G+ K+  ++ +++        G +L       L+R L   K  K + A+ L
Sbjct: 696 KSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHL--CKHKKALEAHQL 753

Query: 730 LCRMKSVGYDLDACLY 745
             + K +G  L    Y
Sbjct: 754 FNKFKGLGVSLKTGSY 769



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 290/636 (45%), Gaps = 66/636 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF-RKQLFLLALAVYYE 158
           ++F++ SG+    D E A+E +  M E    P V  Y +VL +AF +K+     L +  E
Sbjct: 178 IYFLVKSGF----DAE-AMEVYKAMVEDGISPSVRTY-SVLMVAFGKKRDVDTVLWLLNE 231

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PN+ ++++ I  L ++ + + A  +L +M   G  P+  T+T++I  LC   R
Sbjct: 232 MEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGR 291

Query: 219 ADEAYRLFLKMKDSGCSPD-----------------------------------FVAYNA 243
             +A  +F KMK S   PD                                    V+Y A
Sbjct: 292 LSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTA 351

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +++  C++ RVDEALA+    ++ G  P   SY+ LI G  +A  +D A   +  M    
Sbjct: 352 VVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG 411

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P+   + + I    ++G+   A++    M+ +GIVPD    NA++      G L  A+
Sbjct: 412 PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAK 471

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  E+      P+T T+T++I    +    D+A   F+ M ++GC P V   N+LID L
Sbjct: 472 RVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTL 531

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            K G+  +A  LF+K+ E+   PT                +  T++      G + +  +
Sbjct: 532 YKGGKGNEAWQLFHKLKEMKIEPT--------------NGTYNTLLSGLGREGKVKEVMQ 577

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L ++  +   P++ITYN++++   K G +N A+ +   +  KG  PD  +Y T++ GL 
Sbjct: 578 LLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLI 637

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDD 601
           + +R E+AFR+F QM +    P  A   +++    +      A     +Y L+     D 
Sbjct: 638 KEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDK 696

Query: 602 ESMKSI-EEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            S  S+ E  L+K  VE +I   + +      LNDF L P    +  LC+  +  EA  +
Sbjct: 697 SSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCP---LIRHLCKHKKALEAHQL 753

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           F+        +   S   LI GL     +D+A D+F
Sbjct: 754 FNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLF 789



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 243/502 (48%), Gaps = 26/502 (5%)

Query: 97   VSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
            V DV  +  LI   YK G   +A + F K+KE   +P    YN +L+   R+      + 
Sbjct: 518  VPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQ 577

Query: 155  VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
            +  EM +    PN++T++ +++ LSK+G+   AI ML  MT++G  P+  +Y  V+ GL 
Sbjct: 578  LLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLI 637

Query: 215  QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRL 273
            +  R +EA+R+F +MK    +PD+     +L  F K   + EAL  ++ +  K G     
Sbjct: 638  KEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDK 696

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             S+  L++G+ +    +++  +   +    I  +      +IR L +  K  +A +L + 
Sbjct: 697  SSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNK 756

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
             +  G+   T  YN+LI+G  D  L+D A  L  E+ +    P+  T+ +++  M ++  
Sbjct: 757  FKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMR 816

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT------ 446
            V++  K+  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT      
Sbjct: 817  VEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGP 876

Query: 447  LFLRLSQGGNRVHDKASLQTMVEQYCT---------------AGLIHKAYKILMQLAESG 491
            L   L + G  V  +     M+E  C                AG      ++  ++ E G
Sbjct: 877  LLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQG 936

Query: 492  NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              PDI +Y  LI+  C  G +N  L  F++L   GL PD + Y  LI+GL + +R E+A 
Sbjct: 937  INPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAV 996

Query: 552  RIFGQMPQNGCTPSPAVYKSLM 573
             +F +M + G  P+   Y SL+
Sbjct: 997  SLFNEMKKKGIIPNLYTYNSLI 1018



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 172/686 (25%), Positives = 301/686 (43%), Gaps = 41/686 (5%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            +  S +AV+  L +    D      DE++   +S     +  LISG+ K    ++ALE F
Sbjct: 345  NIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELF 404

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
              M      P+ Y +   +N   +    L A+  Y  M     +P++   + ++  L+ S
Sbjct: 405  NHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGS 464

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            G+  +A ++  E+   G+ P+  TYT++I    + ++ADEA   F  M +SGC PD +A 
Sbjct: 465  GRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLAL 524

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            N+L++   K  + +EA  L    ++    P  G+Y+ L+ GL R  +  E      +M  
Sbjct: 525  NSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTR 584

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                P+++ Y  ++  LS+ G+V  A+ +L  M E+G  PD   YN ++ G      L++
Sbjct: 585  TIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEE 644

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK-MEKAGCFPSVGMFNALI 420
            A  +  ++ K+   P+  T   ++    +NG++ +A     + + KAGC      F++L+
Sbjct: 645  AFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLM 703

Query: 421  DGLCKAGELEKA------------------------NLLFYKMEIGKNPTLFLRLSQGGN 456
            +G+ K   +EK+                        +L  +K  +  +  LF +    G 
Sbjct: 704  EGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH-QLFNKFKGLGV 762

Query: 457  RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
             +    S  +++       LI  A  +  ++   G  PD  TYN +++   K   +   L
Sbjct: 763  SLK-TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEML 821

Query: 517  KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            K+ KE+  KG     VTY T+I+GL +  R E A  ++  +   G +P+P  Y  L+   
Sbjct: 822  KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 881

Query: 577  CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-----VENAIQGLLEMDFKLN 631
             +  K   A +L+ + L        E   +I   L  G       EN  Q   +M  +  
Sbjct: 882  LKSGKMVDAENLFNEMLE----YGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGI 937

Query: 632  DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLA 689
            +  +  YTI +  LC  G++ + L  F  L E    + P   V   LI GL K   ++ A
Sbjct: 938  NPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELG--LEPDLIVYNLLIDGLGKSERIEEA 995

Query: 690  MDVFLYTLKNGFILRPRVCNYLLRSL 715
            + +F    K G I      N L+  L
Sbjct: 996  VSLFNEMKKKGIIPNLYTYNSLILHL 1021



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 218/508 (42%), Gaps = 85/508 (16%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE-M 159
            +  ++ G  K    E+A   F +MK+    PD      +L    +  L   AL    E +
Sbjct: 629  YNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYI 687

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +K  C  +  +F  L+ G+ K    E +I+  + +  RGIL N F    +I  LC+  +A
Sbjct: 688  LKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKA 747

Query: 220  DEAYRLFLK-----------------------------------MKDSGCSPDFVAYNAL 244
             EA++LF K                                   MK  GC PD   YN +
Sbjct: 748  LEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLI 807

Query: 245  LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            L+   K  RV+E L + +   + G+     +Y+ +I GL ++KR ++A   Y  +  E  
Sbjct: 808  LDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGF 867

Query: 305  EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             P    YG ++ GL ++GK+ DA  L ++M E G  P+   YN L+ G    G  +    
Sbjct: 868  SPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQ 927

Query: 365  LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
            L  ++ ++   P+  ++TILI  +C  G ++D    F ++ + G  P + ++N LIDGL 
Sbjct: 928  LFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLG 987

Query: 425  KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            K+  +E+A  LF +M+                                            
Sbjct: 988  KSERIEEAVSLFNEMK-------------------------------------------- 1003

Query: 485  MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                + G +P++ TYNSLI    K G    A ++++EL  KG +P   TY  LI G    
Sbjct: 1004 ----KKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVS 1059

Query: 545  DREEDAFRIFGQMPQNGCTPSPAVYKSL 572
               ++A+  +GQM   GC P+ + Y  L
Sbjct: 1060 GSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 171/340 (50%)

Query: 84   QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            Q  ++ +   VS+ +  +  LI G       + A + F +MK   C PD + YN +L+  
Sbjct: 752  QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 811

Query: 144  FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +       L V  EM +       VT++ +I+GL KS + E AI +   +   G  P  
Sbjct: 812  GKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 871

Query: 204  FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             TY  ++ GL +  +  +A  LF +M + GC P+   YN LLNG       +    L   
Sbjct: 872  CTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEK 931

Query: 264  FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              + G  P + SY+ LID L  A R ++   ++R++ E  +EPD+++Y ++I GL ++ +
Sbjct: 932  MVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSER 991

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            +++A+ L ++M+++GI+P+ Y YN+LI      G   +A  +  E+ ++   P+  T+  
Sbjct: 992  IEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNA 1051

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            LI G   +G  D+A   + +M   GC P+   +  L + L
Sbjct: 1052 LIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 174/677 (25%), Positives = 313/677 (46%), Gaps = 46/677 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  L+K   F L     D +    V +   V+   I  Y +V + + A     +M++
Sbjct: 166 SQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQD 225

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +     YN ++    + Q    A+ V   M+      + VT   L+ G  ++ + ++
Sbjct: 226 EGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDM 285

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++M  +M + G +P++   + ++ GL +  R +EA+RL  ++ +    P+  AYNALLN
Sbjct: 286 ALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLN 345

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK     EA  L+      G  P   +Y+ LI  L +    D+A     +M E+ +  
Sbjct: 346 NMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRM 405

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            V  Y  +I    +   +  AM  LS+M E G+ P+   Y+ +I G C  G L  A  L 
Sbjct: 406 TVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELH 465

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ ++    NT+TFT LI G C+   +D+A +LFNKM ++   P+   FNA+I+G C  
Sbjct: 466 RKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLV 525

Query: 427 GELEKANLLFYKMEI-GKNPTLF--------LRLSQGGNR-------------VHDKASL 464
           G++ KA  L+ +M   G  P  +        L L+ G ++             V +K SL
Sbjct: 526 GDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSL 585

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  +C  G + +AY +  ++A  G   D+I++  ++    K  +   +  LF+E++ 
Sbjct: 586 TALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKE 645

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KG+RPD+V +  +IN   +      A   + +M  +G  P+   Y +L+   C+    S 
Sbjct: 646 KGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSS 705

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENA-------IQGLLEMDFKLNDFQLA 636
           A  L  + L      +  +    ++ F  +G +E A       +QG L     +N     
Sbjct: 706 AELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTL--- 762

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
                + G C+ GQ++EA+++ S   E       P C+    +IH LCK+G ++ A++++
Sbjct: 763 -----IKGFCKVGQIQEAIDLISRSTENGFF---PDCISYSTVIHELCKKGDINEAIELW 814

Query: 694 LYTLKNGFILRPRVCNY 710
              L  G  ++P +  Y
Sbjct: 815 NEMLYKG--VKPDIVAY 829



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 263/561 (46%), Gaps = 49/561 (8%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            FR      + + + +  + +A+++ + K   F    + ++E+    +      + +LI 
Sbjct: 321 AFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIH 380

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
              K G  + AL    +M+E   +  VY YN+++N   +K    +A+    EMV++   P
Sbjct: 381 SLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTP 440

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  ++S +I GL + G    A+++  +M ++G+  N +T+T +I+G C+  + DEA RLF
Sbjct: 441 NAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLF 500

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS------CLI 280
            KM +S   P+ V +NA++ G+C +  + +A  L       G  P   +Y       CL 
Sbjct: 501 NKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLT 560

Query: 281 DGLFRAK-----------------------------RYDEAYAWYRKMFEEKIEPDVVLY 311
           DG  +AK                             R  EAY  + +M     + D++ +
Sbjct: 561 DGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISF 620

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            +++    +    + +  L  +M+E+G+ PD   +  +I  +   G + QA +   E+  
Sbjct: 621 TIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIA 680

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
              LPNT T+T L+  +C++  +  A+ L  +M  +   P+   FN  +D     G LE 
Sbjct: 681 DGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLET 740

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  L++ M  G     FL          +  S+ T+++ +C  G I +A  ++ +  E+G
Sbjct: 741 AKDLYFAMLQG-----FLA---------NIVSVNTLIKGFCKVGQIQEAIDLISRSTENG 786

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD I+Y+++I+  CK G+IN A++L+ E+  KG++PD V Y  LI         +   
Sbjct: 787 FFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCL 846

Query: 552 RIFGQMPQNGCTPSPAVYKSL 572
            I+  M + G  P+   +++L
Sbjct: 847 GIYIDMVKKGVQPNWHTHRAL 867



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 156/582 (26%), Positives = 269/582 (46%), Gaps = 20/582 (3%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           T D  R G V   ++  F+L  G  K G  E+A     ++ E    P+++ YNA+LN   
Sbjct: 290 TGDMARLGFVPSEANCSFML-DGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMC 348

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +  +F  A  +  EM      PN VT+++LI+ L K G  + A+ MLD M ++G+    +
Sbjct: 349 KNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVY 408

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+  C+ +  D A     +M + G +P+  +Y+ ++ G C+   +  A+ L R  
Sbjct: 409 PYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKM 468

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            + G      +++ LI+G  +AK+ DEA   + KM E  +EP+ V +  +I G    G +
Sbjct: 469 AEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDI 528

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A +L   M  RG+ PD Y Y +LI G C      +A+    ++    S+ N  + T L
Sbjct: 529 RKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTAL 588

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
           + G CR G + +A  ++N+M   G    +  F  ++    K  + EK+ +LF +M E G 
Sbjct: 589 LHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGV 648

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P              D      M+  Y   G + +A     ++   G+LP+ +TY +L+
Sbjct: 649 RP--------------DNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALV 694

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           N  CK  +++ A  L KE+      P+S T+   ++        E A  ++  M Q G  
Sbjct: 695 NNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFL 753

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQG 622
            +     +L+   C+  +   A  L  +   +    D  S  + I E  +KG++  AI+ 
Sbjct: 754 ANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIEL 813

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLVE 663
             EM +K     +  Y I LI  C   G+  + L I+  +V+
Sbjct: 814 WNEMLYKGVKPDIVAYNI-LIRWCNIHGESDKCLGIYIDMVK 854



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 227/495 (45%), Gaps = 49/495 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  T S ++  L K  +  +A  + D M   G+L +++ YT  I   C++   D A  L
Sbjct: 160 PDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGL 219

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M+D G     V YN L+ G CK +RV EA+ +  S    G      +   L+ G  R
Sbjct: 220 VARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCR 279

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            +  D A      M      P       M+ GL + G+V++A +L   + E  +VP+ + 
Sbjct: 280 TEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFA 339

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YNAL+   C  G+  +A  L  E+  +   PN  T+ ILI  +C+ GM+DDA  + ++M 
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           + G   +V  +N+LI+  CK  +L+ A     +M EIG  P              + AS 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTP--------------NAASY 445

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C  G +  A ++  ++AE G   +  T+ +LINGFCK   ++ A +LF ++  
Sbjct: 446 SPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTE 505

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
             L P+ VT+  +I G   V     AF+++ QM   G TP    Y+SL++  C     S 
Sbjct: 506 SNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASK 565

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           A                      +EF+   E   ++         LN F L   T  L G
Sbjct: 566 A----------------------KEFVADLENNCSV---------LNKFSL---TALLHG 591

Query: 645 LCQDGQVKEALNIFS 659
            C++G++ EA ++++
Sbjct: 592 FCREGRLTEAYHVWN 606



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 3/261 (1%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           G + ++S  F +++    K  D EK+   F +MKE   +PD   +  ++N+  ++   + 
Sbjct: 613 GKLDLIS--FTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQ 670

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  + EM+    LPN VT++ L+N L KS     A  +  EM     LPN +T+   + 
Sbjct: 671 ALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLD 730

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                   + A  L+  M   G   + V+ N L+ GFCK+ ++ EA+ L+    ++GF P
Sbjct: 731 YFATEGNLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFP 789

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SYS +I  L +    +EA   + +M  + ++PD+V Y ++IR  +  G+    + + 
Sbjct: 790 DCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIY 849

Query: 332 SDMRERGIVPDTYCYNALIKG 352
            DM ++G+ P+ + + AL  G
Sbjct: 850 IDMVKKGVQPNWHTHRALFVG 870



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 162/391 (41%), Gaps = 36/391 (9%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+   K    D   +  +++   N+      F  +I GY  VGD  KA + + +M  
Sbjct: 481 TALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMC 540

Query: 127 FDCQPDVYIYNAVL---------------------NIAFRKQLFLLAL------------ 153
               PD Y Y +++                     N +   +  L AL            
Sbjct: 541 RGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTE 600

Query: 154 --AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
              V+ EM       ++++F++++    K   +E +  +  EM ++G+ P+   +T +I+
Sbjct: 601 AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMIN 660

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              +     +A   + +M   G  P+ V Y AL+N  CK   +  A  L +      F+P
Sbjct: 661 MYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLP 720

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +++C +D        + A   Y  M +  +  ++V    +I+G  + G++++A+ L+
Sbjct: 721 NSYTFNCFLDYFATEGNLETAKDLYFAMLQGFL-ANIVSVNTLIKGFCKVGQIQEAIDLI 779

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S   E G  PD   Y+ +I   C  G +++A  L  E+  +   P+   + ILI     +
Sbjct: 780 SRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIH 839

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           G  D    ++  M K G  P+     AL  G
Sbjct: 840 GESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           DLY+  L    +  VSV +     LI G+ KVG  ++A++   +  E    PD   Y+ V
Sbjct: 743 DLYFAMLQGFLANIVSVNT-----LIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTV 797

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           ++   +K     A+ ++ EM+     P+IV +++LI   +  G+++  + +  +M ++G+
Sbjct: 798 IHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGV 857

Query: 200 LPNKFTYTIVISGLCQINRAD 220
            PN  T+  +  G   +++ +
Sbjct: 858 QPNWHTHRALFVGTSLMSKGN 878


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 230/485 (47%), Gaps = 18/485 (3%)

Query: 106 SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
           SG+  + D   A+  F ++      P V  +N +L    + + +  A+++  +M      
Sbjct: 54  SGFDAIDD---AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGIT 110

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+IVT S+LIN     G    A  +L  + +RG   N  T T ++ GLC      +A   
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEF 170

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              +   G   D V Y  L+NG CK+    EA  LL   E     P +  Y+ ++DGL +
Sbjct: 171 HDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCK 230

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                EA   Y  +    I+PDV  Y  +I G    G+ ++  +LL DM +R +  + Y 
Sbjct: 231 DGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYT 290

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN LI   C  G+L +A  ++  + +R   P+  TF  L+ G C    V +A+KLF+   
Sbjct: 291 YNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFA 350

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASL 464
           + G  P V  +N LI G CK   +++A  LF KM   K  P +               + 
Sbjct: 351 ECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNI--------------VTY 396

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            ++++  C +G I  A+++   + + G  P++ITYN +++  CK+  ++ A++LF  +  
Sbjct: 397 SSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE 456

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +GL P+  +Y  LING  +  R ++A  +F +M +    P    Y  L+   C+  + S 
Sbjct: 457 RGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISH 516

Query: 585 AFSLW 589
           A+ L+
Sbjct: 517 AWELF 521



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 240/511 (46%), Gaps = 49/511 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A++  ++ ++ LP++V F++++  + K      AI +  +M  RGI P+  T +I+I+
Sbjct: 62  AVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILIN 121

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C +     A+ +   +   G   + +    ++ G C    V +AL    S    GF+ 
Sbjct: 122 CYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLL 181

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y  LI+GL +     EA+    KM  + + P+VV+Y +++ GL + G V +A  L 
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SD+  RGI PD + Y  LI GFC LG   +   L  ++  R+   N +T+ ILI  +C+ 
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           GM+  A  + N M + G  P +  FN L+ G C   ++ +A  LF    E G  P     
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITP----- 356

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  S   ++  YC    I +A  +  ++      P+I+TY+SLI+G CK G
Sbjct: 357 ---------DVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSG 407

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+ A +LF  +   G  P+ +TY  +++ L ++   + A  +F  M + G TP+ + Y 
Sbjct: 408 RISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYN 467

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C+                  S R DE+M   EE  ++  V +++          
Sbjct: 468 ILINGYCK------------------SKRIDEAMNLFEEMHRRNLVPDSVT--------- 500

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                  Y   + GLC+ G++  A  +F+V+
Sbjct: 501 -------YNCLIDGLCKSGRISHAWELFNVM 524



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 210/409 (51%), Gaps = 12/409 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV- 103
            +GF F +     KR   +  N+  ++ ++K  G  +  +    L   + SVV+  F + 
Sbjct: 128 HMGFAFSVLGMVLKR--GYQLNAITLTTIMK--GLCINGEVRKALEFHD-SVVAQGFLLD 182

Query: 104 ------LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
                 LI+G  K+G   +A E   KM+    +P+V IYN +++   +  L   A  +Y 
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           ++V     P++ T++ LI+G    G+     ++L +M  R +  N +TY I+I  LC+  
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              +A+ +   M + G  PD V +N L++G+C    V EA  L  +F + G  P + SY+
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYN 362

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI G  +  R DEA + + KM  +K+ P++V Y  +I GL ++G++  A +L S + + 
Sbjct: 363 ILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDG 422

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G  P+   YN ++   C + L+D+A  L   +++R   PN  ++ ILI G C++  +D+A
Sbjct: 423 GPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
             LF +M +    P    +N LIDGLCK+G +  A  LF  M  G  P 
Sbjct: 483 MNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPV 531



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 191/396 (48%), Gaps = 15/396 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  +  +V    L + VT+  LINGL K G T  A ++L +M  + + PN   Y +++ 
Sbjct: 167 ALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVD 226

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+     EA  L+  +   G  PD   Y  L++GFC L +  E   LL          
Sbjct: 227 GLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +Y+ LID L +     +A+     M E    PD+V +  ++ G      V +A KL 
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
               E GI PD + YN LI G+C    +D+A SL  ++  +   PN  T++ LI G+C++
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +  A +LF+ +   G  P+V  +N ++D LCK   ++KA  LF  M E G  P +   
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV--- 463

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                      +S   ++  YC +  I +A  +  ++     +PD +TYN LI+G CK G
Sbjct: 464 -----------SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            I+ A +LF  +   G   D +TY  L +   ++  
Sbjct: 513 RISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 233/521 (44%), Gaps = 51/521 (9%)

Query: 176 NGLSKSGKTEV--AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           N   KSG   +  A+ +   +     LP+   + +++  + ++     A  L  +M   G
Sbjct: 49  NAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRG 108

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            +P  V  + L+N +C L  +  A ++L    K G+     + + ++ GL       +A 
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            ++  +  +    D V YG +I GL + G  ++A +LL  M  + + P+   YN ++ G 
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C  GL+ +AR L  ++  R   P+  T+T LI G C  G   +  +L   M       +V
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNV 288

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N LID LCK G L KA+ +   M E G+ P              D  +  T++  YC
Sbjct: 289 YTYNILIDALCKKGMLGKAHDMRNLMIERGQRP--------------DLVTFNTLMSGYC 334

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
               + +A K+    AE G  PD+ +YN LI G+CK   I+ AL LF ++  K L P+ V
Sbjct: 335 LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIV 394

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY +LI+GL +  R   A+ +F  +   G +P+   Y  ++   C+           +Q 
Sbjct: 395 TYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCK-----------IQL 443

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           +       D++++      ++G   N                ++ Y I + G C+  ++ 
Sbjct: 444 V-------DKAIELFNLMFERGLTPN----------------VSSYNILINGYCKSKRID 480

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           EA+N+F  +     +    +   LI GLCK G +  A ++F
Sbjct: 481 EAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 198/458 (43%), Gaps = 51/458 (11%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +D+A+AL         +P +  ++ ++  + + K Y  A +  ++M    I P +V   +
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I      G +  A  +L  + +RG   +      ++KG C  G + +A      +  + 
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            L +  T+  LI G+C+ G+  +A +L +KME     P+V ++N ++DGLCK G + +A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            L+  +   G +P +F              +   ++  +C  G   +  ++L  + +   
Sbjct: 239 DLYSDVVGRGIDPDVF--------------TYTCLIHGFCGLGQWREVTRLLCDMVDRNV 284

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             ++ TYN LI+  CK G +  A  +   +  +G RPD VT+ TL++G    +   +A +
Sbjct: 285 NLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARK 344

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +F    + G TP    Y  L+   C+  +   A SL+ +                     
Sbjct: 345 LFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNK--------------------- 383

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
                        M++K     +  Y+  + GLC+ G++  A  +FS + +        +
Sbjct: 384 -------------MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVIT 430

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              ++  LCK   +D A+++F    + G  L P V +Y
Sbjct: 431 YNIMLDALCKIQLVDKAIELFNLMFERG--LTPNVSSY 466



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  K G    A E F  + +    P+V  YN +L+   + QL   A+ ++  M +  
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+ ++++LING  KS + + A+ + +EM +R ++P+  TY  +I GLC+  R   A+
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
            LF  M D G   D + YN L + F K++ V
Sbjct: 519 ELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 76/163 (46%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           +K   +  + S++I  L K       W+    +  G  S     + +++    K+   +K
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+E F  M E    P+V  YN ++N   + +    A+ ++ EM + N +P+ VT++ LI+
Sbjct: 447 AIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           GL KSG+   A ++ + M   G   +  TY I+     +I   
Sbjct: 507 GLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 225/454 (49%), Gaps = 26/454 (5%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  TFS+LI GL K+G+   A++  ++M +R  +PN     ++++ LCQ    D+A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPRLGSYSCLIDGLF 284
           F  ++   CSP  +  N L+NGFC+L+ +D+AL L    EK+   VP   +Y+ +I    
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 285 RAKRYDEAYAWYRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVP 341
           +  R D+A    R++ EE      DV+    + RG  +A +V +A +LL DM E +   P
Sbjct: 118 KMDRLDQA----RQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   +N +I GFC  G + +A  +   +     +PN  T+T LI G C++G + +A +LF
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 402 NKMEK--AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             +        P+V  FNALI GLCKA  LE A  L  +M             +  +   
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM-------------KARDLRA 280

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  T+++  C  G   +  ++  ++   G  P ++TY +L++  CK G++  A ++ 
Sbjct: 281 DTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVI 340

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +  KG+ PD  TY  L+ GL    +   A   F ++ +  C P   VY +L+   C+ 
Sbjct: 341 RSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKA 400

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
                A   +++ L      D  + K + E L K
Sbjct: 401 ALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCK 434



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 224/484 (46%), Gaps = 57/484 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F VLI+G  K G   +A+E + +M E  C P++   N +L    +      A+A++   
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFR-- 62

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINR 218
             + C P+++T ++LING  +    + A+++  EM +   ++P   TYT +I   C+++R
Sbjct: 63  -GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYS 277
            D+A +L    + S CS D +A  ++  GFCK +RVDEA  LL    EK    P + +++
Sbjct: 122 LDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWN 179

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM--R 335
            +I G  +A R  EAY     +      P+ V Y  +I G  ++G + +A++L   +  R
Sbjct: 180 VIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           +    P+   +NALI G C    L+ A  L  ++  RD   +T T+T L+ G+C+ G   
Sbjct: 240 DHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTS 299

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           +  ++F +M + GC PSV  +  L+   CKAG L+ A                       
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQ---------------------- 337

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                                     +++  +   G  PD+ TY  L+ G  + G +  A
Sbjct: 338 --------------------------QVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            + F+++  +   P +V Y  L+ G  +    ++A + + +M      P PA  K L+  
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431

Query: 576 SCRR 579
            C+R
Sbjct: 432 LCKR 435



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 225/487 (46%), Gaps = 62/487 (12%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+   ++ L+ G CK  R+ EA+       +   VP L   + L+  L +A   D+A A 
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIKGFC 354
           +R +   +  P V+   ++I G  E   +  A++L  +M +   +VP+   Y A+IK +C
Sbjct: 61  FRGI---QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA-QKLFNKMEKAGCFPSV 413
            +  LDQAR L  E     S  +    T +  G C+   VD+A Q L + +EK    P +
Sbjct: 118 KMDRLDQARQLLEESSCCSS--DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +N +I G CKAG + +A    Y+M       L   +S G   V +  +  T+++ +C 
Sbjct: 176 VAWNVIIHGFCKAGRVREA----YEM-------LETLVSMGC--VPNAVTYTTLIDGFCK 222

Query: 474 AGLIHKAYKILMQLAESGNL--PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           +G + +A ++   L+   +   P+++T+N+LI+G CK   +  A +L K+++ + LR D+
Sbjct: 223 SGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADT 282

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            TY TL++GL +  R  +  R+F +M + GC PS   Y +L+   C+             
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCK------------- 329

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                                 G +++A Q +  M  K     +  YT+ L GL ++G+V
Sbjct: 330 ---------------------AGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           + A   F  ++  +    PP  V    L+ G CK   +D A+  ++  L       P  C
Sbjct: 369 RTATEFFEKILRERC---PPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425

Query: 709 NYLLRSL 715
             L+  L
Sbjct: 426 KLLVEML 432



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 180/378 (47%), Gaps = 14/378 (3%)

Query: 61  RSFASNSAVISMLLKPNGF------DLYWQTLDELRSGNVSVVSD--VFFVLISGYYKVG 112
           R    + +VI++ +  NGF      D   +   E+   N ++V +   +  +I  Y K+ 
Sbjct: 62  RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEK-NFALVPEATTYTAIIKCYCKMD 120

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTF 171
             ++A +   +     C  DV    +V     + Q    A  +  +MV K +  P+IV +
Sbjct: 121 RLDQARQLLEESS--CCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF--LKM 229
           +++I+G  K+G+   A +ML+ +   G +PN  TYT +I G C+     EA +LF  L  
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +D    P+ V +NAL++G CK  R++ A  L++  +         +Y+ L+DGL +  R 
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRT 298

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            E    + +M  E   P VV Y  ++    +AG ++DA +++  M  +GI PD   Y  L
Sbjct: 299 SEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVL 358

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           ++G  + G +  A     +I +    P    ++ L+ G C+  +VD+A K + +M     
Sbjct: 359 LEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418

Query: 410 FPSVGMFNALIDGLCKAG 427
            P       L++ LCK G
Sbjct: 419 APDPATCKLLVEMLCKRG 436



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 5/332 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I    K +  D   Q L+E    +  V++     +  G+ K    ++A +    M E
Sbjct: 110 TAIIKCYCKMDRLDQARQLLEESSCCSSDVIA--ITSVARGFCKAQRVDEAYQLLLDMVE 167

Query: 127 F-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               +PD+  +N +++   +      A  +   +V + C+PN VT++ LI+G  KSG   
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLS 227

Query: 186 VAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            A+++   ++ R     PN  T+  +ISGLC+ +R + A+ L  +MK      D   Y  
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTT 287

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G CK  R  E   +     ++G  P + +Y+ L+    +A    +A    R M  + 
Sbjct: 288 LMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKG 347

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I PDV  Y V++ GL E GKV+ A +    +      P    Y+AL++G C   L+D+A 
Sbjct: 348 IPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAV 407

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
              VE+  R   P+  T  +L+  +C+ G  D
Sbjct: 408 KYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 154/315 (48%), Gaps = 23/315 (7%)

Query: 62  SFASNSAVISMLLKPNGF-------DLYWQTLD--ELRSGNVSVVSDVFFVLISGYYKVG 112
           S   +S VI++     GF       + Y   LD  E +S    +V+  + V+I G+ K G
Sbjct: 132 SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA--WNVIIHGFCKAG 189

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVL-------NIAFRKQLFLLALAVYYEMVKLNCL 165
              +A E    +    C P+   Y  ++       N++   QLF +  +  +        
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAE----- 244

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+VTF+ LI+GL K+ + E A +++ +M  R +  + FTYT ++ GLC+  R  E  R+
Sbjct: 245 PNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRV 304

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M   GC+P  V Y  L++  CK   + +A  ++RS    G  P + +Y+ L++GLF 
Sbjct: 305 FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFE 364

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +   A  ++ K+  E+  P  V+Y  ++RG  +A  V +A+K   +M +R + PD   
Sbjct: 365 NGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPAT 424

Query: 346 YNALIKGFCDLGLLD 360
              L++  C  G  D
Sbjct: 425 CKLLVEMLCKRGRTD 439



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 52/326 (15%)

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P+   F+ LI GLCKAG L +A   + +M + ++    LR             +  ++  
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQM-LERHCVPNLR------------DINLLLAS 47

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK-GLRP 529
            C AG + +A  I   +  S   P +IT N LINGFC++  ++ AL+LF E++    L P
Sbjct: 48  LCQAGTMDQAMAIFRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNFALVP 104

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           ++ TY  +I    ++DR + A ++  +   + C+       S+    C+ ++   A+ L 
Sbjct: 105 EATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           L  +   S + D                                 +  + + + G C+ G
Sbjct: 163 LDMVEKKSAKPD---------------------------------IVAWNVIIHGFCKAG 189

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCN 709
           +V+EA  +   LV    +    +   LI G CK G L  A+ +F           P V  
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 710 YLLRSLLFSKDNKKVHAYHLLCRMKS 735
           +        K ++  HA+ L+ +MK+
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKA 275


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 179/726 (24%), Positives = 307/726 (42%), Gaps = 96/726 (13%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKP 76
           +E  L  LL  L    V +V+    + +V  RFF WA ++ R R       A++ +L K 
Sbjct: 88  LEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKT 147

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
                  + L  +    +    + F  ++  Y + G    A+     M++   +PD+ I 
Sbjct: 148 KLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSIC 207

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  +++         A+     M  +   PN++T++ LI G     + E A +++ EM  
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPF 267

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVD 255
           +G  P+K +Y  V+  LC+  R  E   L  KM KDS   PD V YN  ++   K    D
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 256 EALALLRSFEKDGF-VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           EAL  LR  E+  F V ++G YS ++    R  R D+A     +MF +   PDVV Y  +
Sbjct: 328 EALEFLREAEERRFRVDKVG-YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 386

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---SLQVEIWK 371
           I GL +  KV  A K+L  M + G  P+T  Y AL+ G C  G   +AR   ++  E W 
Sbjct: 387 INGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXW- 445

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
              +PN  T+++L+ G  R G   +A  L  +M K G FP+    N LI  LC+  ++++
Sbjct: 446 --WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A                                                 + + Q   +G
Sbjct: 504 AK------------------------------------------------RFMEQCLNNG 515

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              +++ + ++I+GFC+  ++  AL L  ++ L    PD VTY T+I+ L +  R E+A 
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           ++  +M + G  P+P  Y++++   CR                   GR ++ +K +E+ L
Sbjct: 576 KLAMKMLRVGWIPTPVTYRTVIHQYCR------------------MGRVEDLLKLLEKML 617

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
            + E   A   ++E                   LC  G +++A  +   ++   + +   
Sbjct: 618 SRQECRTAYNQVIE------------------KLCSFGNLEQAYKLLGKVLRTASKIDAN 659

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +C  LI     +G   ++ +V         I   ++C  + + L+   + K   A  L+ 
Sbjct: 660 TCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML--EGKSEEADKLIL 717

Query: 732 RMKSVG 737
           R    G
Sbjct: 718 RFVERG 723


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 210/414 (50%), Gaps = 48/414 (11%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + DV+ +N ++N   R Q    A +V  +++KL   P+ VTFS LINGL    K   A++
Sbjct: 116 ERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
             DEM   G  PN  TY  +I G C+I +   A  L  KM  +G  PD V YN +++G C
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K R V EAL +    +  G  P + +YS L+ GL  + + +EA A + +M    I PDVV
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            + +++  L + G + +A  ++  M E+G+ P+   YN+L+ G+C    + +AR +   +
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             +  +PN  ++ ILI G C+   +D+A++LF++M   G  P+   +N LI GLC+AG  
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            +A  LF  M+           +QG                 C+                
Sbjct: 416 CEARELFKDMQ-----------AQG-----------------CS---------------- 431

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
               PD++T   L++  CK+G ++ AL+LF+ +Q   L+P+ VTY  LI  + +
Sbjct: 432 ----PDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 15/395 (3%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A+   + M  +  LP    +  ++S L +I        L  +++      D   +N L
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +N F +L+RVD A ++L    K GF P   ++S LI+GL    ++  A  ++ +M     
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGY 185

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           +P++  Y  +I+G  + GK   A+ LL  M + G  PD   YN +I G C   L+ +A  
Sbjct: 186 QPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALD 245

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  EI  +   P+  T++IL+ G+C +   ++A  LFN+M      P V  FN L+D LC
Sbjct: 246 IFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLC 305

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           K G L +A  +   M E G  P              + A+  +++  YC    + +A  +
Sbjct: 306 KEGMLSEAQGIIKIMIEKGVEP--------------NYATYNSLMNGYCLQNKVFEARMV 351

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              +   G +P++++YN LING+CK   I+ A +LF E+  +GL P++  Y TLI+GL +
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             R  +A  +F  M   GC+P       L+   C+
Sbjct: 412 AGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 215/422 (50%), Gaps = 13/422 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  +  M+  + LP IV F  L++ L +       + +   +    I  + F + I+I+
Sbjct: 68  ALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILIN 127

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              ++ R D A+ +  K+   G  PD V +++L+NG C   +   A+         G+ P
Sbjct: 128 CFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQP 187

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            L +Y+ +I G  +  +   A    +KM +    PD+V+Y  +I GL +   V +A+ + 
Sbjct: 188 NLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIF 247

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+++ +G+ PD + Y+ L+ G C+    ++A +L  E+   + +P+  TF IL+  +C+ 
Sbjct: 248 SEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKE 307

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           GM+ +AQ +   M + G  P+   +N+L++G C   ++ +A ++F  M           +
Sbjct: 308 GMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM-----------I 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           ++G   + +  S   ++  YC A  I +A ++  +++  G +P+   YN+LI+G C+ G 
Sbjct: 357 TKGC--MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A +LFK++Q +G  PD VT   L++ L ++   ++A R+F  M  +   P+   Y  
Sbjct: 415 HCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDI 474

Query: 572 LM 573
           L+
Sbjct: 475 LI 476



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 8/332 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I+ L   + F    +  DE+ +         +  +I G+ K+G    A+    KM +
Sbjct: 158 SSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDK 217

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD+ IYN +++   + +L   AL ++ E+      P++ T+S+L++GL  S + E 
Sbjct: 218 AGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE 277

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + +EM    I+P+  T+ I++  LC+     EA  +   M + G  P++  YN+L+N
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN 337

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C   +V EA  +  +    G +P + SY+ LI+G  +A+R DEA   + +M    + P
Sbjct: 338 GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIP 397

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA---- 362
           +   Y  +I GL +AG+  +A +L  DM+ +G  PD      L+   C LG LD A    
Sbjct: 398 NTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF 457

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           R++Q    K    PN  T+ ILI  M ++G +
Sbjct: 458 RAMQDSCLK----PNLVTYDILIRAMYKSGKI 485



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 193/446 (43%), Gaps = 49/446 (10%)

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C L  +++AL           +P +  +  L+  L R K Y    +  +++   +IE DV
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             + ++I   S   +V  A  +L  + + G  PD   +++LI G C      +A     E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      PN HT+  +I G C+ G    A  L  KM+KAG  P + ++N +IDGLCK   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 429 LEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           + +A  +F +++  G  P +F              +   ++   C +    +A  +  ++
Sbjct: 240 VSEALDIFSEIKGKGVRPDVF--------------TYSILMHGLCNSDQKEEASALFNEM 285

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                +PD++T+N L++  CK G ++ A  + K +  KG+ P+  TY +L+NG    ++ 
Sbjct: 286 MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKV 345

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            +A  +F  M   GC P+   Y  L+   C+ +                  R DE+ +  
Sbjct: 346 FEARMVFDAMITKGCMPNVVSYNILINGYCKAQ------------------RIDEARELF 387

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +E   +G + N                   Y   + GLCQ G+  EA  +F  +      
Sbjct: 388 DEMSFRGLIPNTFN----------------YNTLISGLCQAGRHCEARELFKDMQAQGCS 431

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVF 693
               +C  L+  LCK GYLD A+ +F
Sbjct: 432 PDLVTCTILLDSLCKLGYLDNALRLF 457



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 5/218 (2%)

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D+  +N LIN F ++  ++ A  +  ++   G  PD+VT+ +LINGL   D+   A   F
Sbjct: 118 DVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFF 177

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQ 612
            +M  +G  P+   Y +++   C+  K ++A  L L+ +    GR D  + +  I+   +
Sbjct: 178 DEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL-LKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              V  A+    E+  K     +  Y+I + GLC   Q +EA  +F+ ++    +    +
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              L+  LCK G L  A  +    ++ G  + P    Y
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKG--VEPNYATY 332


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 168/662 (25%), Positives = 299/662 (45%), Gaps = 24/662 (3%)

Query: 60  LRSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R F  +    +MLL    K       W    E+ +  V      F +LI+     G  +
Sbjct: 126 IRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLK 185

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA     KM+E    P V  YN VLN   +K  +  AL +  +M       +  T+++L+
Sbjct: 186 KAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLV 245

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + L K+ ++     +L +M +R I PN+ TY  +I+G  +  +   A R+F +M      
Sbjct: 246 DDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLL 305

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V YNAL++G C     ++AL +L   E  G  P   SYS L++GL R  +++ + + 
Sbjct: 306 PNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSI 365

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M    +    + Y  MI GL   G + +++KLL  M + G+VPD   ++ LI GFC 
Sbjct: 366 LERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCR 425

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +G +   + +  +++K    PN+  +T LI   C+ G V +A K++  M + G   +  +
Sbjct: 426 VGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFI 485

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            N L+  LCK G++  A   F+ M            S+ GN V +  +   ++  Y  +G
Sbjct: 486 CNVLVSSLCKDGKVGVAEYFFHHM------------SKIGN-VPNSITFDCIINGYGNSG 532

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
              KA+ +  ++ ++G+ P   TY  L+   C+ G    A +L  +L       D+VTY 
Sbjct: 533 NGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYN 592

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           T++    +     DA  +F +M Q    P    Y  +     RR K   A   +   L  
Sbjct: 593 TILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGK 652

Query: 596 ISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
            +   ++ M +  ++   + G+ + A+    +M+       L    + L G  + G++ +
Sbjct: 653 GAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAK 712

Query: 654 ALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           A +IF+++     I   PS      L+HG  K+  L    +++   ++ G       C+ 
Sbjct: 713 AGDIFTMMWS--GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHS 770

Query: 711 LL 712
           L+
Sbjct: 771 LI 772



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 266/591 (45%), Gaps = 23/591 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y + G    ALE+F  M      P VY  N +L    +++        + EM
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEM 159

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P++ TF++LIN L   GK + A  +L +M + G +P+  TY  V++  C+  R 
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  +M   G   D   YN L++  CK  R  +   LL+   K    P   +Y+ +
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +  +   A   +++M    + P+ V Y  +I G    G  + A+ +L  M   G 
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y+AL+ G C     + ++S+   +     +     +T +I G+CRNG+++++ K
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF---YKMEIGKNPTLFLRLSQGGN 456
           L +KM K G  P V  F+ LI+G C+ G+++    +    YK  +  N  ++        
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY-------- 451

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    T++  YC  G + +A+K+ + ++  G   +    N L++  CK G +  A 
Sbjct: 452 --------TTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
             F  +   G  P+S+T+  +ING         AF +F +M + G  PS   Y  L+   
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           CR  KF  A  L  +     S  D  +  +I  E  + G + +A+    EM  +      
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRG 684
             Y I   GL + G++  AL+ +  L+  K  V+P   +    + GL + G
Sbjct: 624 YTYAIIFAGLIRRGKMVAALHFYGNLLG-KGAVSPEKVMYTTFVDGLFRAG 673



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 253/586 (43%), Gaps = 60/586 (10%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S ++  LI  Y K GD  +A + +  M       + +I N +++   +     +A   ++
Sbjct: 448 SIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFH 507

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            M K+  +PN +TF  +ING   SG    A  M DEM + G  P+ FTY  ++  LC+  
Sbjct: 508 HMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAG 567

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA RL  K+     + D V YN +L    K   + +A+AL     +   +P   +Y+
Sbjct: 568 KFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYA 627

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
            +  GL R  +   A  +Y  +  +  + P+ V+Y   + GL  AG+ K A+    DM +
Sbjct: 628 IIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEK 687

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVD 395
            G+  D    N ++ G+  +G + +A  +   +W   ++ P+  T+ IL+ G  +   + 
Sbjct: 688 NGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLS 747

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-------------------NLLF 436
               L+N M + G FP     ++LI G CK+  L+                     N+L 
Sbjct: 748 KCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLI 807

Query: 437 YKM----EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            K     E+GK   L + +    +   D  +  +++        + +++ +L ++ E G 
Sbjct: 808 MKYCETDEVGKAFDL-VNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGC 866

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           +PD   Y +L+N  C++G+I+GA KL  E++  G+    V    L+ GL +  + E+A  
Sbjct: 867 IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKL 926

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +   M +    P+ A + +LM   CR      A       L+D                 
Sbjct: 927 VLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK-----LKD----------------- 964

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                        MDF      +  Y + + GLC DG V  AL ++
Sbjct: 965 ------------TMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 210/482 (43%), Gaps = 62/482 (12%)

Query: 108  YYKVGDCEKALESFGKMKE----------FDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            ++  G   KAL   GK KE               D   YN +L   F+  +   A+A++ 
Sbjct: 553  HFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFD 612

Query: 158  EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG-ILPNKFTYTIVISGLCQI 216
            EMV+ N LP+  T++++  GL + GK   A+     +  +G + P K  YT  + GL + 
Sbjct: 613  EMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672

Query: 217  NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGS 275
             ++  A      M+ +G   D +A N +LNG+ ++ ++ +A  +    +      P L +
Sbjct: 673  GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLAT 732

Query: 276  YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL------------------------- 310
            Y+ L+ G  + K   +    Y  M    I PD +                          
Sbjct: 733  YNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKML 792

Query: 311  ----------YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
                      + ++I    E  +V  A  L++ M    I PD   ++++I     +  + 
Sbjct: 793  LDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQ 852

Query: 361  QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            ++  L  E+ +R  +P+   +  L+  MCR G +  A KL ++ME  G        +AL+
Sbjct: 853  ESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALV 912

Query: 421  DGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
             GL K G++E+A L+  + +     PT+              A+  T++  +C    + +
Sbjct: 913  RGLAKCGKVEEAKLVLDFMLRKSLIPTI--------------ATFTTLMHMFCRNESLVE 958

Query: 480  AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            A K+   +       D+I YN LI+G C  G++  ALKL+KE++ +GL P+  TY  LI+
Sbjct: 959  ALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILID 1018

Query: 540  GL 541
             +
Sbjct: 1019 AI 1020



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 217/509 (42%), Gaps = 50/509 (9%)

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            S  F  +I+GY   G+  KA   F +M +    P  + Y  +L    R   F  A  +  
Sbjct: 518  SITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLD 577

Query: 158  EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            ++  +    + VT++ ++    KSG    A+ + DEM QR +LP+ +TY I+ +GL +  
Sbjct: 578  KLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRG 637

Query: 218  RADEAYRLFLKMKDSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            +   A   +  +   G  SP+ V Y   ++G  +  +   AL      EK+G    L + 
Sbjct: 638  KMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIAT 697

Query: 277  SCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + +++G  R  +  +A   +  M+    I P +  Y +++ G ++   +     L + M 
Sbjct: 698  NVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMM 757

Query: 336  ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
              GI PD    ++LI GFC   +LD    L  ++       +  TF +LI   C    V 
Sbjct: 758  RTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVG 817

Query: 396  DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
             A  L N M     FP +   +++I  L +   +++++LL ++M           L +G 
Sbjct: 818  KAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEM-----------LERGC 866

Query: 456  NRVHDKASLQTMVEQYCTAGLIHKAYKI-------------------LMQLAESGN---- 492
              + D+     +V + C  G IH A+K+                   +  LA+ G     
Sbjct: 867  --IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEA 924

Query: 493  ------------LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
                        +P I T+ +L++ FC+  ++  ALKL   +    ++ D + Y  LI+G
Sbjct: 925  KLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISG 984

Query: 541  LQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            L        A +++ ++ Q G  P+   Y
Sbjct: 985  LCADGDVASALKLYKEIKQRGLWPNMTTY 1013



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 155/351 (44%), Gaps = 2/351 (0%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L  G VS    ++   + G ++ G  + AL     M++     D+   N +LN   R   
Sbjct: 650 LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709

Query: 149 FLLALAVYYEM-VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
              A  ++  M   +   P++ T+++L++G +K         + + M + GI P+K T  
Sbjct: 710 MAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCH 769

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I G C+    D   +L  KM   G + D   +N L+  +C+   V +A  L+      
Sbjct: 770 SLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLF 829

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P + ++  +I  L R     E++    +M E    PD   Y  ++  +   G +  A
Sbjct: 830 DIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            KL  +M   GI       +AL++G    G +++A+ +   + ++  +P   TFT L+  
Sbjct: 890 FKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHM 949

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            CRN  + +A KL + M+       V  +N LI GLC  G++  A L  YK
Sbjct: 950 FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASA-LKLYK 999



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 36/319 (11%)

Query: 103  VLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            V+++GY ++G   KA + F  M       P +  YN +L+   +K+       +Y  M++
Sbjct: 699  VILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMR 758

Query: 162  LNCLPNIVTFSLLINGLSKSGKTEV----------------------------------- 186
                P+ +T   LI G  KS   +V                                   
Sbjct: 759  TGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGK 818

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A  +++ M    I P+  T+  +IS L +++   E++ L  +M + GC PD   Y AL+N
Sbjct: 819  AFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVN 878

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
              C++  +  A  L    E  G      + S L+ GL +  + +EA      M  + + P
Sbjct: 879  RMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIP 938

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
             +  +  ++        + +A+KL   M    +  D   YN LI G C  G +  A  L 
Sbjct: 939  TIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLY 998

Query: 367  VEIWKRDSLPNTHTFTILI 385
             EI +R   PN  T+ ILI
Sbjct: 999  KEIKQRGLWPNMTTYCILI 1017



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 94   VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            V+V    F +LI  Y +  +  KA +    M  FD  PD+  +++++++  R      + 
Sbjct: 796  VAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESH 855

Query: 154  AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             + +EM++  C+P+   +  L+N + + G    A K+ DEM   GI       + ++ GL
Sbjct: 856  LLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGL 915

Query: 214  CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             +  + +EA  +   M      P    +  L++ FC+   + EAL L  + +       +
Sbjct: 916  AKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDV 975

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL-SEAGKVKDAMKLLS 332
             +Y+ LI GL        A   Y+++ +  + P++  Y ++I  + +    +     LL 
Sbjct: 976  IAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLK 1035

Query: 333  DMRERGIVPDTYC 345
            D++ERG++   +C
Sbjct: 1036 DLQERGVISGHWC 1048


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 213/409 (52%), Gaps = 22/409 (5%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + + + L++GL K G+      +  EM +R I P   ++ IVI+GLC++ + ++A  +  
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDE---ALALLRSFEKDGFVPRLGSYSCLIDGLF 284
            MK  G S + + YN L++G+CK+ ++ +   A A+L+    DG  P   +++ LIDG  
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           + K    A   + +M  + ++P+VV Y  +I GL   GKV +A  L   M    + P+  
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            +NAL+ GFC   ++ QA  L  ++ K+   PN  T+ ILI   C++  ++DA  L+  M
Sbjct: 308 THNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIM 367

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
              G  P V  +N LI GLC+ G+LE A  L  +M+                  H KA L
Sbjct: 368 LGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTK----------------HLKADL 411

Query: 465 QT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            T   +++  C  G + KA ++L ++   G  P  +TYN++I+G+CK GN+  AL L  +
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           ++  G   +  TY  LI G  + D+ EDA  +  +M + G  P+   Y+
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 216/451 (47%), Gaps = 29/451 (6%)

Query: 17  PIEPALEPLLPFLSKTT----------------VTSVIM--------KTKNPQVGFRFFI 52
           PI     PLL F++ +T                  S+I+        K    ++GF  F 
Sbjct: 58  PISRVQTPLLSFINYSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFK 117

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
            A+      S  S + ++S L+K            E+    +      F ++I+G  KVG
Sbjct: 118 RASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVG 177

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLN----IAFRKQLFLLALAVYYEMVKLNCLPNI 168
              KA +    MK      +V  YN +++    +    +++  A A+  EM      PN 
Sbjct: 178 KLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK-ADAILKEMRADGICPNE 236

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VTF++LI+G  K      A+K+  EM ++G+ PN  TY  +I+GLC   + +EA  L  +
Sbjct: 237 VTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQ 296

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M +S   P+ + +NALLNGFCK + V +A  L     K G  P + +Y+ LID   + + 
Sbjct: 297 MVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDEN 356

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            ++A+A YR M  + + PDV  Y  +I GL   G ++ A  L+S+M  + +  D   YN 
Sbjct: 357 MEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNI 416

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI   C+ G + +A  L  E+ ++   P+  T+  +I G C+ G +  A  L ++MEK G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
              +V  +N LI G CK  +LE AN L  +M
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEM 507



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 202/402 (50%), Gaps = 5/402 (1%)

Query: 45  QVGFRFFIWAAK-RKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF 102
           ++G   F++    R+R+  +  S + VI+ L K    +     +++++   VS     + 
Sbjct: 143 EIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYN 202

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQ---PDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            LI GY K+G   K  ++   +KE       P+   +N +++   + +    A+ V+ EM
Sbjct: 203 TLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM 262

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    PN+VT++ LINGL  +GK   A  + D+M    + PN  T+  +++G C+    
Sbjct: 263 NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMV 322

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  LF  M   G +P+   YN L++ +CK   +++A AL R     G  P + +Y+CL
Sbjct: 323 KQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL R    + A     +M  + ++ D++ Y ++I  L   G++K A++LL +M  +G+
Sbjct: 383 IAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGL 442

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    YN +I G+C  G L  A +L+ ++ K   L N  T+ +LI G C+   ++DA  
Sbjct: 443 KPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANG 502

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           L N+M + G  P+   +  + + + + G +       YK+ +
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAV 544



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 208/445 (46%), Gaps = 70/445 (15%)

Query: 272 RLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           +L   SC  L+ GL +     +    Y++M   +IEP ++ + ++I GL + GK+  A  
Sbjct: 125 KLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGD 184

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLD---QARSLQVEIWKRDSLPNTHTFTILIC 386
           ++ DM+ RG+  +   YN LI G+C +G +    +A ++  E+      PN  TF ILI 
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
           G C++  V  A K+F +M + G  P+V  +N+LI+GLC  G++ +A  L  +M       
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM------- 297

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                                         ++   K           P+IIT+N+L+NGF
Sbjct: 298 ------------------------------VNSCLK-----------PNIITHNALLNGF 316

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK   +  A +LF ++  +G+ P+  TY  LI+   + +  EDAF ++  M   G  P  
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--------IEEFLQKGEVEN 618
           + Y  L+   CR+     A +L       +S  D + +K+        I+    KGE++ 
Sbjct: 377 STYNCLIAGLCRKGDLEAARNL-------VSEMDTKHLKADLITYNILIDSLCNKGEMKK 429

Query: 619 AIQGLLEMDFK-LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           A++ L EM  K L   QL  Y   + G C++G ++ ALN+ S + +   +    +   LI
Sbjct: 430 ALRLLDEMCRKGLKPSQLT-YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFI 702
            G CK+  L+ A  +    L+ G I
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLI 513



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 18/398 (4%)

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T C N L+ G   +G +     +  E+ +R   P   +F I+I G+C+ G ++ A  +  
Sbjct: 129 TSC-NPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M+  G   +V  +N LIDG CK G++ K     YK +        L+  +      ++ 
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGK----MYKADA------ILKEMRADGICPNEV 237

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++ +C    +  A K+  ++   G  P+++TYNSLING C  G +N A  L  ++
Sbjct: 238 TFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
               L+P+ +T+  L+NG  +    + A  +F  MP+ G TP+   Y  L+   C+    
Sbjct: 298 VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357

Query: 583 SLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
             AF+L+   L      D  +    I    +KG++E A   + EMD K     L  Y I 
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKN 699
           +  LC  G++K+AL +   +  C+  + P       +I G CK G L  A+++     K 
Sbjct: 418 IDSLCNKGEMKKALRLLDEM--CRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKV 475

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           G +      N L++   F K +K   A  LL  M   G
Sbjct: 476 GRLANVATYNVLIKG--FCKKDKLEDANGLLNEMLEKG 511



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 22/262 (8%)

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + + N L++G  KVG I     ++KE+  + + P  +++  +INGL +V +   A  I  
Sbjct: 128 VTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIE 187

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF--SLWLQYLRDISGRDDESMKS--IEEFL 611
            M   G + +   Y +L+   C+  K    +     L+ +R      +E   +  I+ F 
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC 247

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           +   V  A++   EM+ +     +  Y   + GLC +G+V EA  +   +V         
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVN-------- 299

Query: 672 SCVK--------LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
           SC+K        L++G CK   +  A ++F    K G  + P V  Y +    + KD   
Sbjct: 300 SCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG--ITPNVTTYNILIDAYCKDENM 357

Query: 724 VHAYHLLCRMKSVGYDLDACLY 745
             A+ L   M   G   D   Y
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTY 379


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 179/726 (24%), Positives = 308/726 (42%), Gaps = 96/726 (13%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKP 76
           +E  L  LL  L    V +V+    + +V  RFF WA ++ R R       A++ +L K 
Sbjct: 88  LEGELRHLLRSLKPRQVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKT 147

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
                  + L  +    +    + F  ++  Y + G    A+     M++   +PD+ I 
Sbjct: 148 KLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSIC 207

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N  +++         A+     M  +   PN++T++ LI G     + E A++++ EM  
Sbjct: 208 NTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPF 267

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVD 255
           +G  P+K +Y  V+  LC+  R  E   L  KM KDS   PD V YN  ++   K    D
Sbjct: 268 KGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGD 327

Query: 256 EALALLRSFEKDGF-VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           EAL  LR  E+  F V ++G YS ++    R  R D+A     +MF +   PDVV Y  +
Sbjct: 328 EALEFLREAEERRFRVDKVG-YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSV 386

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---SLQVEIWK 371
           I GL +  KV  A K+L  M + G  P+T  Y AL+ G C  G   +AR   ++  E W 
Sbjct: 387 INGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW- 445

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
              +PN  T+++L+ G  R G   +A  L  +M K G FP+    N LI  LC+  ++++
Sbjct: 446 --WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDE 503

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A                                                 + + Q   +G
Sbjct: 504 AK------------------------------------------------RFMEQCLNNG 515

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              +++ + ++I+GFC+  ++  AL L  ++ L    PD VTY T+I+ L +  R E+A 
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           ++  +M + G  P+P  Y++++   CR                   GR ++ +K +E+ L
Sbjct: 576 KLAMKMLRVGLIPTPVTYRTVIHQYCR------------------MGRVEDLLKLLEKML 617

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
            + E   A   ++E                   LC  G +++A  +   ++   + +   
Sbjct: 618 SRQECRTAYNQVIE------------------KLCSFGNLEQAYKLLGKVLRTASKIDAN 659

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +C  LI     +G   ++ +V         I   ++C  + + L+   + K   A  L+ 
Sbjct: 660 TCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML--EGKSEEADKLIL 717

Query: 732 RMKSVG 737
           R    G
Sbjct: 718 RFVERG 723


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/654 (24%), Positives = 308/654 (47%), Gaps = 32/654 (4%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
           AK K L    S +   S+L      D+ W   +E+++  V        +LI G  +    
Sbjct: 192 AKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRL 251

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+    +    +  P V  +NA+++   +     +A + +  M+K   LP++ ++++L
Sbjct: 252 QDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNIL 311

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++GL  +G  E A++  ++M   G+ P+  TY I+ +G   +     A+++  +M  +G 
Sbjct: 312 LHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGL 371

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           +PD V Y  L+ G C++  ++E+  L       G    + +Y+ L+  L ++ R DEA  
Sbjct: 372 NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVI 431

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              +M    ++PD++ Y          G V++A++L  +M  + I P+++  +A+I G  
Sbjct: 432 LLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLF 483

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           + G + +A+     + K D       + I+I G  + G + +A + + ++ + G  P++ 
Sbjct: 484 EKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIV 543

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            FN+LI G CK G+L +A  L   +++ G  PT                +  T++  YC 
Sbjct: 544 TFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT--------------SVTYTTLMNGYCE 589

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +H  + +L ++      P  ITY  ++ G CK G ++ +++L K +  +GL PD +T
Sbjct: 590 EGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQIT 649

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I    +    + AF++  QM Q+   PSP  Y  L+   C       A  L L  L
Sbjct: 650 YNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRL-LVTL 708

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           +D S R  +   +  I+    KG+V+NA+    +M  +  +  +  Y+  +  LC+   +
Sbjct: 709 QDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLI 768

Query: 652 KEALNIFSVLVECKAIVTPPS---CVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            +A   F +++       PP    C+ +++   + G  +   ++F   +K G +
Sbjct: 769 TDAKFFFCMMLTHG---IPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 819



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 159/660 (24%), Positives = 292/660 (44%), Gaps = 58/660 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL------NIAF--------- 144
           V+ +L   Y +      AL    KMK  + Q  +  YN++L      +I +         
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKAS 229

Query: 145 -----------------RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
                            R+     A+    E       P++V+F+ L++G  K G  +VA
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
                 M + G+LP+ ++Y I++ GLC     +EA      M++ G  PD V YN L NG
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           F  L  +  A  +++    +G  P L +Y+ LI G  +    +E++    KM  + ++  
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y V++  L ++G++ +A+ LL +M   G+ PD   Y+         G +++A  L  
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYE 461

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+  +   PN+   + +I G+   G + +AQ  F+ + K+     + ++N +IDG  K G
Sbjct: 462 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 521

Query: 428 ELEKANLLFYK--MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            + +A +  YK  +E G +PT+               +  +++  +C  G + +A K+L 
Sbjct: 522 NIGEA-VRSYKQIIEKGISPTI--------------VTFNSLIYGFCKKGKLAEAVKLLD 566

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G +P  +TY +L+NG+C+ G+++    +  E++ K ++P  +TY  ++ GL +  
Sbjct: 567 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 626

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R  ++ ++   M   G  P    Y +++   C+      AF L  Q L+        +  
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             I      G +++A + L+ +  +        YT  +   C  G V+ AL  F  +VE 
Sbjct: 687 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 746

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              V+      +I+ LCKR  +  A   F   L +G      +C  +L +   S D   V
Sbjct: 747 GFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSV 806



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 230/512 (44%), Gaps = 51/512 (9%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +L+ G    G  E+ALE    M+    +PD+  YN + N  FR    +       + + L
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILAN-GFRILGLISGAWKVVQRMLL 368

Query: 163 NCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           N L P++VT+++LI G  + G  E + K+ ++M  +G+  +  TYT+++S LC+  R DE
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428

Query: 222 AYRLFLKMKDSGCSPDFVAYN---------------------------ALLNGFCKLRRV 254
           A  L  +M+  G  PD + Y+                           A+++G  +   +
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAI 488

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            EA     S  K      +  Y+ +IDG  +     EA   Y+++ E+ I P +V +  +
Sbjct: 489 SEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSL 548

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I G  + GK+ +A+KLL  ++  G+VP +  Y  L+ G+C+ G +     +  E+  +  
Sbjct: 549 IYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 608

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P   T+T+++ G+C+ G + ++ +L   M   G FP    +N +I   CKA +L+KA  
Sbjct: 609 KPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668

Query: 435 LFYKM---EIGKNPTLFLRLSQG----GN---------RVHD------KASLQTMVEQYC 472
           L  +M    +  +P  +  L  G    GN          + D      K +  T+++ +C
Sbjct: 669 LHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHC 728

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G +  A     Q+ E G    I  Y+++IN  CK   I  A   F  +   G+ PD  
Sbjct: 729 AKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQD 788

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
               ++N   R       F IF  M + G  P
Sbjct: 789 ICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 181/417 (43%), Gaps = 52/417 (12%)

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V++ ++    S A  V DA+ +L+ M+   +      YN+L+    +L   D    +  E
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY---NLRHTDIMWDVYNE 225

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I       N +T  ILI G+CR   + DA     +       PSV  FNAL+ G CK G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++ A   F  M + G  P ++              S   ++   C AG + +A +    +
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVY--------------SYNILLHGLCVAGSMEEALEFTNDM 331

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDI+TYN L NGF  +G I+GA K+ + + L GL PD VTY  LI G  ++   
Sbjct: 332 ENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNI 391

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL------------WLQYLRD 595
           E++F++  +M   G   S   Y  L++  C+  +   A  L             L Y R 
Sbjct: 392 EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR- 450

Query: 596 ISGRDDESMKSIEEFLQKGEVENA------IQGLLE--------MDFKL---NDF--QLA 636
             G  +E+++  EE   K    N+      I GL E        M F     +D   ++ 
Sbjct: 451 --GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 508

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            Y I + G  + G + EA+  +  ++E     T  +   LI+G CK+G L  A+ + 
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 565


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/597 (25%), Positives = 275/597 (46%), Gaps = 56/597 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV----ISMLLKPNGFDLYWQ 84
           L+  +V SV+   +NP    +F+IW +    L  FA + +V     + L +     L  +
Sbjct: 111 LNSHSVASVLQNQENPLYPLKFYIWVSNMDPL--FAKDQSVKGVLANCLYRKGPVVLSVE 168

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            L ++++    +  ++  +LI  + ++G  +   E FG++      P   +YNAV++   
Sbjct: 169 LLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALV 228

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           +     LA   + +M   NC P+  T+++LI+G+ +SG  + A++++ +M   G  PN F
Sbjct: 229 KSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVF 288

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK-------------- 250
           TYTI+I G     + DEA+R+   MK    SP      + ++G  +              
Sbjct: 289 TYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEF 348

Query: 251 ------LRRVD---------------EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
                 L+R+                EA ALL+ F K G  P   +++  ++ L +    
Sbjct: 349 IEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDL 408

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +E      +  E+ ++     Y  +I+ L  AGKV +     + M + G++ +   YN +
Sbjct: 409 NEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMV 468

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I  FC   ++D+A +   E+  +   PN  TF  LI G C+ G +  ++ L   + + G 
Sbjct: 469 IDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGF 528

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P +  F+++IDGLC+A ++E A   F +M + G +P              +  +   ++
Sbjct: 529 KPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSP--------------NAVTYNILI 574

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G + ++ K+L ++   G  PD+ ++N+LI  FC++G +  A KLF  +   GL 
Sbjct: 575 HSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLI 634

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           PD+ TY   I    +  R  +A  +F  M  NGC P       ++    ++ +F  A
Sbjct: 635 PDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 224/531 (42%), Gaps = 85/531 (16%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D  +   + N  +RK   +L++ +  ++       N     +LI    + G  +   ++ 
Sbjct: 146 DQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIF 205

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +++  GI P+   Y  VI  L + N  D AY  F +M    C PD   YN L++G C+ 
Sbjct: 206 GQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRS 265

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
             VDEAL L++  E  G+ P + +Y+ LIDG F AK+ DEA+     M   K+ P     
Sbjct: 266 GVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATI 325

Query: 312 GVMIRG-----------------------------------LSEAGKVKDAMKLLSDMRE 336
              I G                                   LS     ++A  LL    +
Sbjct: 326 RSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGK 385

Query: 337 RGIVPDTYCY----NALIKGF-----CDL--------------------------GLLDQ 361
            G  PD+  +    N LIKGF     C++                          G + +
Sbjct: 386 IGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTE 445

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
                 ++ K   L N  ++ ++I   C+  M+D A   F +M+  G  P++  FN LID
Sbjct: 446 GNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLID 505

Query: 422 GLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CK GE+ K+ +LL   +E G  P +F              +  ++++  C A  I  A
Sbjct: 506 GYCKGGEICKSRDLLVMLLEHGFKPDIF--------------TFSSIIDGLCRAKQIEDA 551

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
                ++   G  P+ +TYN LI+  C +G++  ++KL +++Q  G+ PD  ++  LI  
Sbjct: 552 LGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQS 611

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             R+ + EDA ++F  M   G  P    Y + +   C+  +F+ A  L+L 
Sbjct: 612 FCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLS 662



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 243/566 (42%), Gaps = 56/566 (9%)

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +L N L + G   +++++L ++   G   N+    I+I    ++  A     +F ++   
Sbjct: 152 VLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFL 211

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G SP    YNA+++   K   +D A    +    D   P   +Y+ LI G+ R+   DEA
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               ++M      P+V  Y ++I G   A KV +A ++L  M+ R + P      + I G
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
                  ++A  L +E  +R+ +        L+C +    M  +A  L  K  K G  P 
Sbjct: 332 VFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPD 391

Query: 413 VGMFNALIDGLCKAGEL-EKANLL--FYK--MEIGKNPTLFL--------RLSQGGNRVH 459
              FN  ++ L K  +L E  N+L  F +  M+ G +  L L        ++++G +  +
Sbjct: 392 SATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFN 451

Query: 460 ---------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    +  S   +++ +C   ++ KA     ++   G  P+++T+N+LI+G+CK G
Sbjct: 452 QMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGG 511

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  +  L   L   G +PD  T+ ++I+GL R  + EDA   F +M   G +P+   Y 
Sbjct: 512 EICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYN 571

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C                  I G    SMK     L+K + +     +   +  +
Sbjct: 572 ILIHSLC------------------IIGDVPRSMK----LLRKMQTDGINPDVFSFNALI 609

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
             F            C+ G+V++A  +FS ++    I    + V  I   C+ G  + A 
Sbjct: 610 QSF------------CRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAK 657

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLL 716
           ++FL    NG +     CN +L +L+
Sbjct: 658 ELFLSMEANGCMPDSFTCNIILDALV 683



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 4/288 (1%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           LNEV  ILD    +E  ++    F +   +   +        G  +F    K   L +  
Sbjct: 408 LNEVCNILDRF--VEQGMK--FGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVC 463

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S + VI    K +  D    T  E++   +      F  LI GY K G+  K+ +    +
Sbjct: 464 SYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVML 523

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E   +PD++ ++++++   R +    AL  + EMV     PN VT+++LI+ L   G  
Sbjct: 524 LEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDV 583

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             ++K+L +M   GI P+ F++  +I   C++ + ++A +LF  M   G  PD   Y A 
Sbjct: 584 PRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAF 643

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           +  FC+  R +EA  L  S E +G +P   + + ++D L +  +++ A
Sbjct: 644 IKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 21/259 (8%)

Query: 96  VVSDVFFVLISGYYKVGDC-------EKALESFGKMKEFDCQPDVYIYNAVLN------- 141
           +V D     +  Y  V DC       +KA  +F +M+     P++  +N +++       
Sbjct: 453 MVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGE 512

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
           I   + L ++ L   ++       P+I TFS +I+GL ++ + E A+    EM   G+ P
Sbjct: 513 ICKSRDLLVMLLEHGFK-------PDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSP 565

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N  TY I+I  LC I     + +L  KM+  G +PD  ++NAL+  FC++ +V++A  L 
Sbjct: 566 NAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLF 625

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            S    G +P   +Y   I    ++ R++EA   +  M      PD     +++  L + 
Sbjct: 626 SSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQ 685

Query: 322 GKVKDAMKLLSDMRERGIV 340
            + + A K+     E GI+
Sbjct: 686 DQFEAAQKIAKTCSEWGIL 704



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 35/211 (16%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S++I  L +    +       E+    +S  +  + +LI     +GD  ++++   KM+ 
Sbjct: 536 SSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQT 595

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV+ +NA                                   LI    + GK E 
Sbjct: 596 DGINPDVFSFNA-----------------------------------LIQSFCRMGKVED 620

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A K+   M   G++P+ +TY   I   CQ  R +EA  LFL M+ +GC PD    N +L+
Sbjct: 621 AKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILD 680

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              K  + + A  + ++  + G +    + S
Sbjct: 681 ALVKQDQFEAAQKIAKTCSEWGILVNFAAIS 711


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 241/461 (52%), Gaps = 22/461 (4%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           +A+ V+ E  +L    N V+ +++++ L + GK   A  +L +MT RG  P+  +Y +V+
Sbjct: 225 IAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVV 284

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SG C+I   D+  +L  ++K  G  PD   YN ++   CK   V EA  LLR   K G  
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P    Y+ +I G  +      A   + +M  +KI PD+V Y  +I G+ ++GK+ +A ++
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            ++M  +G+ PD   Y ALI G+C  G + +A S+  ++ ++   PN  T+T L  G+C+
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP---- 445
           NG +D A +L ++M + G  P+V  +N +++GLCK G +E+   L  +M++ G  P    
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 446 --TLFLRLSQGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLA 488
             TL     + G        L+ M+ +               +C +G++    +++  + 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           E G +P+  T+NSL+  +C   N+    +++K +  +G+ PDS TY  LI G  +    +
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +A+ +  +M + G + + A Y +L+    +R+KF  A  L+
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLF 685



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 226/489 (46%), Gaps = 48/489 (9%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           ++G+ +K L+   ++K    +PD YIYN ++ +  +    + A  +   M K    P+ V
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            ++ +I+G  K G    A K+ DEM ++ I+P+  TYT VI G+C+  +  EA  +F +M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G  PD V Y AL++G+CK   + EA ++     + G  P + +Y+ L DGL +    
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEI 468

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D A     +M  + ++P+V  Y  ++ GL + G ++  +KL+ +M   G  PDT  Y  L
Sbjct: 469 DVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  +C +G + +A  L   +  +   P   TF +L+ G C +GM++D ++L   M + G 
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+   FN+L+   C    +     ++  M                   HD+        
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAM-------------------HDR-------- 621

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                                G +PD  TYN LI G CK  N+  A  L KE+  KG   
Sbjct: 622 ---------------------GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSV 660

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            + TY  LI G  +  +  +A ++F +M ++G      +Y   +  +     + +   L 
Sbjct: 661 TAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELC 720

Query: 590 LQYLRDISG 598
            +++ ++SG
Sbjct: 721 DEFMTELSG 729



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 287/616 (46%), Gaps = 95/616 (15%)

Query: 113 DCEKALESFGKM-----KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           D  K+   F +M     K++   P   +++    +       L A  +++++++   + +
Sbjct: 148 DVSKSFHLFTEMLIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVS 205

Query: 168 IVTFSLLINGLSKSGK-TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           + + +L ++ LS + +  ++A+K+ +E  + G+  N  +  IV+  LCQ+ +  EA+ L 
Sbjct: 206 VDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLL 265

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           ++M D G  PD V+Y  +++G+C++  +D+ L L+   +  G                  
Sbjct: 266 VQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG------------------ 307

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
                            ++PD  +Y  +I  L + G+V +A +LL  MR+ G+ PD   Y
Sbjct: 308 -----------------LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVY 350

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             +I GFC LG +  A  L  E+ ++  +P+  T+T +I G+C++G + +A+++FN+M  
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G  P    + ALIDG CKAGE+++A  +  +M + G  P +               +  
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV--------------VTYT 456

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            + +  C  G I  A ++L +++  G  P++ TYN+++NG CK+GNI   +KL +E+ L 
Sbjct: 457 ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLA 516

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G  PD++TY TL++   ++     A  +   M      P+   +  LM   C        
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFC-------- 568

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA---------------IQGLLEMDFKL 630
                     +SG  ++  + IE  L+KG + NA               ++   E+   +
Sbjct: 569 ----------MSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM 618

Query: 631 NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
           +D  + P    Y I + G C+   +KEA  +   +VE    VT  +   LI G  KR   
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678

Query: 687 DLAMDVFLYTLKNGFI 702
             A  +F    K+G +
Sbjct: 679 VEARKLFEEMRKHGLV 694



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 188/356 (52%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q L  +R   V   + V+  +ISG+ K+G+   A + F +M+     PD+  Y +V++  
Sbjct: 333 QLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGI 392

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +    + A  ++ EM+     P+ VT++ LI+G  K+G+ + A  + ++M Q+G+ PN 
Sbjct: 393 CKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT +  GLC+    D A  L  +M   G  P+   YN ++NG CK+  +++ + L+  
Sbjct: 453 VTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +  GF P   +Y+ L+D   +     +A+   R M  ++++P +V + V++ G   +G 
Sbjct: 513 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGM 572

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           ++D  +L+  M E+GI+P+   +N+L+K +C    +     +   +  R  +P+++T+ I
Sbjct: 573 LEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNI 632

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           LI G C+   + +A  L  +M + G   +   ++ALI G  K  +  +A  LF +M
Sbjct: 633 LIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM 688



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 214/469 (45%), Gaps = 54/469 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +DEL+   +     ++  +I    K G+  +A +    M+++   PD  +Y  V++   +
Sbjct: 300 VDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCK 359

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A  ++ EM +   +P+IVT++ +I+G+ KSGK   A +M +EM  +G+ P++ T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I G C+     EA+ +  +M   G +P+ V Y AL +G CK   +D A  LL    
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + +Y+ +++G                                   L + G ++
Sbjct: 480 RKGLQPNVYTYNTIVNG-----------------------------------LCKIGNIE 504

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
             +KL+ +M   G  PDT  Y  L+  +C +G + +A  L   +  +   P   TF +L+
Sbjct: 505 QTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKN 444
            G C +GM++D ++L   M + G  P+   FN+L+   C    +     ++  M + G  
Sbjct: 565 NGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM 624

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  +   +++ +C A  + +A+ +  ++ E G      TY++LI 
Sbjct: 625 P--------------DSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIR 670

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           GF K      A KLF+E++  GL  +   Y   ++    V+ EE  + I
Sbjct: 671 GFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD----VNYEEGNWEI 715



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 180/364 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VIS   K        +  DE+R   +      +  +I G  K G   +A E F +M  
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   Y A+++   +      A +V+ +MV+    PN+VT++ L +GL K+G+ +V
Sbjct: 411 KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDV 470

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L EM+++G+ PN +TY  +++GLC+I   ++  +L  +M  +G  PD + Y  L++
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK+  + +A  LLR        P L +++ L++G   +   ++       M E+ I P
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP 590

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   +  +++       ++   ++   M +RG++PD+  YN LIKG C    + +A  L 
Sbjct: 591 NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLH 650

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++       T+  LI G  +     +A+KLF +M K G      +++  +D   + 
Sbjct: 651 KEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEE 710

Query: 427 GELE 430
           G  E
Sbjct: 711 GNWE 714



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 233/527 (44%), Gaps = 52/527 (9%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGF-CKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           EA +LF K+   G      + N  L+   C    +  A+ +   F + G      S + +
Sbjct: 189 EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIV 248

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +  L +  +  EA+    +M +    PDVV YGV++ G    G++   +KL+ +++ +G+
Sbjct: 249 LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGL 308

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD Y YN +I   C  G + +A  L   + K    P+   +T +I G C+ G V  A K
Sbjct: 309 KPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACK 368

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
           LF++M +    P +  + ++I G+CK+G++ +A  +F +M + G  P             
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEP------------- 415

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D+ +   +++ YC AG + +A+ +  Q+ + G  P+++TY +L +G CK G I+ A +L
Sbjct: 416 -DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANEL 474

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             E+  KGL+P+  TY T++NGL ++   E   ++  +M   G  P    Y +LM   C+
Sbjct: 475 LHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCK 534

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                                              GE+  A + L  M  K     L  +
Sbjct: 535 M----------------------------------GEMAKAHELLRIMLNKRLQPTLVTF 560

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
            + + G C  G +++   +   ++E   +    +   L+   C +  +    +++     
Sbjct: 561 NVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHD 620

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G +      N L++    +++ K+  A+ L   M   GY + A  Y
Sbjct: 621 RGVMPDSNTYNILIKGHCKARNMKE--AWFLHKEMVEKGYSVTAATY 665


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 247/548 (45%), Gaps = 69/548 (12%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           + ++  RFF W+ K  RL       S V+  L     +      LD         VS VF
Sbjct: 57  DSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVF 116

Query: 102 F-----------------VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
                             +L+  Y K  +   A E+F + K++  +  +   N +L+   
Sbjct: 117 HSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALV 176

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           ++        VY EM+K     N+ TF++ INGL ++GK   A   +++M   GI PN  
Sbjct: 177 KENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVV 236

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKD---SGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           TY  ++ G C+   A + Y+    MK+   +   P+ V +N L++GFCK   V  A    
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
              +K G  P + +Y+ LI+GL    + +EA   + KM    ++P++V Y  +I G  + 
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
             +K+A K+  D+ ++ +VP+   +N +I  +C  G++++  SL   +     LPN  T+
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
             LI G+CR   +  A++L N+ME  G    V  +N LIDGLCK                
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCK---------------- 460

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
                            +DK+                 A K+L ++   G  P+ +TYN+
Sbjct: 461 -----------------NDKS---------------RNAEKLLNEMFNLGLKPNHVTYNT 488

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L++G+C  G +  AL +   ++ +  +P+ VTY  LI G  ++++ E A  +  +M + G
Sbjct: 489 LMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548

Query: 562 CTPSPAVY 569
             P+   Y
Sbjct: 549 LNPNRTTY 556



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 25/346 (7%)

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF   L S + L+  L +  +  +    Y++M + +I  ++  + + I GL  AGK+  A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFC---DLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
              + DM+  GI P+   YN L+ G+C     G + +A +   E+      PN  TF  L
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTL 279

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
           I G C++  V  A+K F +M+K G  P++  +N+LI+GLC  G+LE+A  L+ KM  +G 
Sbjct: 280 IDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339

Query: 444 NPTLFL-----------RLSQGGNRVHDKASLQ----------TMVEQYCTAGLIHKAYK 482
            P +             ++ +   +V D  S Q          TM++ YC  G++ + + 
Sbjct: 340 KPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFS 399

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +   + + G LP++ TYN LI G C+  ++  A +L  E++ KGL+ D VTY  LI+GL 
Sbjct: 400 LCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLC 459

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           + D+  +A ++  +M   G  P+   Y +LM   C   K   A ++
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 187/389 (48%), Gaps = 16/389 (4%)

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++S L + N+  +   ++ +M       +   +N  +NG C+  ++++A   +   +  G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 269 FVPRLGSYSCLIDGLFR---AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             P + +Y+ L+DG  +   A +  +A A+ ++M   KI P+ V +  +I G  +   V 
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A K   +M+++G+ P+   YN+LI G C+ G L++A  L  ++      PN  T+  LI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G C+  M+ +A K+F+ + K    P+V  FN +ID  CK G +E+   L   M      
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM------ 404

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                L +G   + + ++   ++   C    +  A ++L ++   G   D++TYN LI+G
Sbjct: 405 -----LDEG--ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK      A KL  E+   GL+P+ VTY TL++G     + + A  +  +M +    P+
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
              Y  L+   C+  K   A  L  + L 
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLE 546



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 133/255 (52%), Gaps = 5/255 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G    G  E+A++ + KM     +P++  YNA++N   +K++   A  V+ ++ K  
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN++TF+ +I+   K G  E    +   M   GILPN  TY  +I+GLC+      A 
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAK 433

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M++ G   D V YN L++G CK  +   A  LL      G  P   +Y+ L+DG 
Sbjct: 434 ELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGY 493

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +   A     +M +E+ +P+VV Y V+I+G  +  K++ A  LL++M E+G+ P+ 
Sbjct: 494 CMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNR 553

Query: 344 YCYN-----ALIKGF 353
             Y+      L KGF
Sbjct: 554 TTYDIVRLEMLEKGF 568



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 168/381 (44%), Gaps = 52/381 (13%)

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ KR    N +TF I I G+CR G ++ A+     M+  G  P+V  +N L+DG CK G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
              K     YK E       F++         ++ +  T+++ +C    +  A K   ++
Sbjct: 250 SAGK----MYKAEA------FMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEM 299

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G  P+I+TYNSLING C  G +  A+ L+ ++   GL+P+ VTY  LING  +    
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMM 359

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD------------ 595
           ++A ++F  + +    P+   + +++   C+       FSL    L +            
Sbjct: 360 KEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCL 419

Query: 596 ISGR-DDESMKSIEEFLQKGEVENA------------IQGLLEMDFKLN---------DF 633
           I+G    + +++ +E L   E+EN             I GL + D   N         + 
Sbjct: 420 IAGLCRKQDLQAAKELLN--EMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL 477

Query: 634 QLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            L P    Y   + G C +G++K ALN+ + + + +      +   LI G CK   L+ A
Sbjct: 478 GLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAA 537

Query: 690 MDVFLYTLKNGFILRPRVCNY 710
             +    L+ G  L P    Y
Sbjct: 538 NGLLNEMLEKG--LNPNRTTY 556



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)

Query: 457 RVHDK-ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK---VGNI 512
           R+H    +    +   C AG ++KA   +  +   G  P+++TYN+L++G+CK    G +
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKM 254

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A    KE+    + P+ VT+ TLI+G  + +    A + F +M + G  P+   Y SL
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSL 314

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C   K   A  LW                                 ++ +  K N 
Sbjct: 315 INGLCNNGKLEEAIDLW-------------------------------DKMVGLGLKPN- 342

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +  Y   + G C+   +KEA  +F  + + + +    +   +I   CK G ++    +
Sbjct: 343 --IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
               L  G +      N L+  L   +D +   A  LL  M++ G   D   Y
Sbjct: 401 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQA--AKELLNEMENKGLKGDVVTY 451



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 11/266 (4%)

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM-VEQYCTAGLIHKAYKILMQLAESGNLP 494
           F K E     ++F  L   G R    A +  M V  Y     +H AY+   +  + G   
Sbjct: 104 FVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKL 163

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            + + N L++   K   I     ++KE+  + +  +  T+   INGL R  +   A    
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRR---RKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
             M   G +P+   Y +L+   C+R    K   A +   + L +    ++ +  + I+ F
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +   V  A +   EM  +     +  Y   + GLC +G+++EA++++  +V    +   
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV---GLGLK 340

Query: 671 PSCVK---LIHGLCKRGYLDLAMDVF 693
           P+ V    LI+G CK+  +  A  VF
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVF 366


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 169/687 (24%), Positives = 295/687 (42%), Gaps = 87/687 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F W +K     S  + S ++ +L+  +  D+  +  +E+  G       V+  + + + K
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKG-----LGVYEFVFNSFLK 217

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            G+ EK L     + E    P +   N +L          +A   +  MV+    PN+VT
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF---- 226
           FS LIN   K  + + A  + + M ++GI+P+   Y+I+I+GL +  + +E   LF    
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 227 -------------------------------LKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                                           +M   G SP+ V Y+ L+NG C+  RV 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA  +     K G  P + +YS LIDG  +++   + +  Y  M  +   PDVV+  ++I
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GLS  G + +A++      +RG+  + Y +NALI G   L        + + +     +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+T+L+ G+   G +D+A  LF ++ K G  P   ++  LIDG CK  +      +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F             +L Q      D      ++  +   G +    ++L ++ + G  PD
Sbjct: 578 F-------------KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I+TYN++I G+C +   + A+KLF+ L+    +P+++T+  LI+   +  R +DA  IF 
Sbjct: 625 IVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M + G  P+   Y  L+    +      AF L+ + L D    +               
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN--------------- 729

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
                              +  Y+I + GLC+ G ++EA   F   +    +    +   
Sbjct: 730 -------------------IVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           LI G CK G L  AM ++ + L NG +
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIM 797



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 249/513 (48%), Gaps = 17/513 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +LI+G ++ G  E+    F        + DV I++++++   R      A+ VY  M
Sbjct: 312 IYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K    PN+VT+S+LINGL ++G+   A  +  ++ ++G+ P+  TY+ +I G C+    
Sbjct: 372 LKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENL 431

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            + + L+  M   G  PD V  + L+NG  +   +DEAL       K G       ++ L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG FR KR  +    Y  M   K+ PDVV Y V+++GL+E G++ +A+ L   + ++G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQV-EIWKRDSL-PNTHTFTILICGMCRNGMVDDA 397
            PD   Y  LI GFC     D A  LQ+ ++ + + + P+   + +LI    R G V++ 
Sbjct: 552 SPDHIIYCTLIDGFCK--KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +L  ++ K G  P +  +N +I G C      KA  LF  ++ G+              
Sbjct: 610 LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP----------- 658

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +   +++ YC  G +  A  I   + E G  P+I+TY+ LI+G+ K  N   A +
Sbjct: 659 --NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L++++    + P+ V+Y  LI+GL +    E+A   F         P    Y  L+   C
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           +  + + A  L+   L +    DD   K++ E+
Sbjct: 777 KVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEY 809



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 233/519 (44%), Gaps = 26/519 (5%)

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           ++ G +P  V Y+ LL+ +C+   VD A+       K G      + S ++D L  + R 
Sbjct: 133 RNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRI 191

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D     Y +M +      + +Y  +     + G+V+  +     + ERG+VP     N +
Sbjct: 192 DVILENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKI 246

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +KG C    +  A      + +    PN  TF+ LI   C+   +D+A  L+N M + G 
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P + +++ LI+GL +AG+LE+ N LF  M + +   +            D     ++++
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLF-SMALARGVKM------------DVVIFSSIMD 353

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            Y   G + KA ++  ++ + G  P+++TY+ LING C+ G +  A  +F ++  +GL P
Sbjct: 354 AYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             +TY +LI+G  + +   D F ++G M + G  P   V   L+    R+     A   +
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473

Query: 590 LQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            Q + R ++  +      I+   +     + ++  + M        +  YT+ + GL + 
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           G++ EAL +F  L+  K   +P   +   LI G CK+      + +F     NG    P 
Sbjct: 534 GRLDEALALFFQLL--KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF--PD 589

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +C Y +   +F ++    +   LL  +   G + D   Y
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 168/402 (41%), Gaps = 28/402 (6%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +R R   P T  ++ ++  F +L +L +            S P+T  ++ L+   CRNGM
Sbjct: 100 LRHRMFDPATRVFDRMVGQFGNLEVLGE---FHGSFRNYGSNPST-VYSFLLHCYCRNGM 155

Query: 394 VDDAQKLFNKMEKAGC----FPSVGMFNALIDG------------LCKA-GELEKA-NLL 435
           VD A   F  M K G     + +  M + LID             +CK  G  E   N  
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             + E+ K       L + G  V        +++  C    I  A      +  SG  P+
Sbjct: 216 LKRGEVEKGLNFHRALVERG-LVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPN 274

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++T+++LIN +CK   ++ A  L+  +  KG+ PD V Y  LINGL R  + E+   +F 
Sbjct: 275 LVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFS 334

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQKG 614
                G      ++ S+M    R      A  ++ + L++ IS         I    + G
Sbjct: 335 MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            V  A     ++  +  +  +  Y+  + G C+   +++   ++ +++    +     C 
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCS 454

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            LI+GL ++G +D A+  F   +K G  L     NYL  +L+
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLN----NYLFNALI 492



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           L+ G     +  F +LI  Y K G  + A+  F  M E   +P++  Y+ +++  F+ + 
Sbjct: 651 LKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTEN 710

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +Y +M+     PNIV++S+LI+GL K G  E A         R +LP+   Y I
Sbjct: 711 TESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           +I G C++ R  EA  L+  M  +G  PD +   AL
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 253/589 (42%), Gaps = 85/589 (14%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI--- 142
            DE+    V     V+ + ISG  K+ D ++AL+  GKM+E   +P    Y++V+++   
Sbjct: 208 FDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVK 267

Query: 143 --------AFRKQLFLL-------------------------ALAVYYEMVKLNCLPNIV 169
                     + Q+ L                          AL ++ E+V     P  V
Sbjct: 268 VGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNV 327

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGIL----------------------------- 200
           T+ +LI G    G ++   K+  +M ++G+L                             
Sbjct: 328 TYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELV 387

Query: 201 -----PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                P+ FTY  +I  LC+  +  EA  L+ KMK++G  P  V Y++LL G+C+  R+D
Sbjct: 388 VDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMD 447

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EAL L       GF P   +Y+ L+ G  + K +D AYA   +M +  +      Y ++I
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL    +V +  ++L      G VP T  YN++I GF   G++  A  +  ++ K+   
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGIT 567

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NL 434
           PN  T+T  I G CR    D A KL   + + G  P +  +NA ID  CK G + +A + 
Sbjct: 568 PNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHF 627

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           L   ++ G  P              D     + V  Y    ++ +A K    + +   + 
Sbjct: 628 LVLLLKDGLTP--------------DVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           D   Y +LI+GF KVGN+  AL+L+ E+    + PD  T+  L +GL R    + A R+ 
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLL 733

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             M +   +P+   Y  L+    R  K   AF L  + L      DD +
Sbjct: 734 DDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 287/642 (44%), Gaps = 27/642 (4%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F +M+   C  D  +Y+ V+    R  +   A+ ++ EM      P+   +++ I+
Sbjct: 169 ALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITIS 228

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCS 235
           GL K    + A+++L +M + G  P + TY+ V+  L ++ R DEA RL  +M   +G  
Sbjct: 229 GLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKK 288

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            D V    L++G+C    V +AL L      DG  P   +Y  LI G       DE Y  
Sbjct: 289 MDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKL 348

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            R+M E+ +      + ++I+GL    + KDA+ LL  + + G VPD + Y  LI   C 
Sbjct: 349 CRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG-VPDVFTYGCLIHWLCK 407

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              L +A +L  ++ +    P+  T+  L+ G C  G +D+A KL+++M   G  P+   
Sbjct: 408 HQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVT 467

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +  L+ G  K    + A  L  +M             Q G    D  +   ++       
Sbjct: 468 YTTLMKGYIKKKAFDNAYALLNEMR------------QNGVSCGDY-TYNILINGLYMVN 514

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + +  ++L +    G +P  +TYNS+INGF K G +  A  ++++++ KG+ P+ VTY 
Sbjct: 515 RVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           + I+G  R +  + A ++   + ++G  P  A Y + +   C++   S A    +  L+D
Sbjct: 575 SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634

Query: 596 ISGRD----DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
               D    +  +   +      E       +++    + D ++  YT  + G  + G V
Sbjct: 635 GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRV-VADTEI--YTTLIDGFSKVGNV 691

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
             AL ++S ++    I    +   L HGLC+ G +D A  +     +    + P +  Y 
Sbjct: 692 AFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRR--LDVSPNIVTYN 749

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY---PKTKS 750
           +      +D K   A+ L   M S G   D   Y   P+T +
Sbjct: 750 MLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRTNN 791



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 254/614 (41%), Gaps = 95/614 (15%)

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           Y  MV    +P+  + + L+   ++      A+ + DEM  +G   +   Y +VI    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                +A RLF +M  +G  PD   Y   ++G CKLR  D AL +L    + GF P   +
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           YS ++D L +  R DEA     +M      + DVVL  +++ G    G+V  A+ L  ++
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 335 RERGIVPDTYCYNALIKGFCDL-GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
              G+ P    Y  LIKG CD  G+ D+   L  ++ ++  L +T+ F ++I G+ R+  
Sbjct: 318 VSDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKR 376

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
             DA  L   +   G  P V  +  LI  LCK                            
Sbjct: 377 WKDAIGLLELVVDTG-VPDVFTYGCLIHWLCK---------------------------- 407

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                H K               +H+A  +  ++ E+G  P I+TY+SL+ G+C+ G ++
Sbjct: 408 -----HQK---------------LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMD 447

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ALKL+ E+  KG  P+ VTY TL+ G  +    ++A+ +  +M QNG +     Y  L+
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
                             Y+ +     DE +K    FL +G V   +             
Sbjct: 508 NG---------------LYMVNRVCEVDEMLK---RFLSEGFVPTTMT------------ 537

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLDLAMD 691
               Y   + G  + G +  A  ++  +   K  +TP   +    I G C+    DLA+ 
Sbjct: 538 ----YNSIINGFVKAGMMGSAFGMYRQMR--KKGITPNIVTYTSFIDGYCRTNCCDLAVK 591

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
           + +Y  ++G  ++P +  Y      F K      A H L  +   G   D  +Y    S 
Sbjct: 592 LLIYVRRDG--IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVY---NSF 646

Query: 752 LPGPWNTREMENMS 765
           + G  N + M   S
Sbjct: 647 VTGYKNLKMMAEAS 660



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 39/238 (16%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + F +Y Q    +R   ++     +   I GY +   C+ A++    ++    QPD+  Y
Sbjct: 553 SAFGMYRQ----MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAY 608

Query: 137 NAVLN---------------------------------IAFRKQLFLLALA--VYYEMVK 161
           NA ++                                 +   K L ++A A   YY M+K
Sbjct: 609 NAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIK 668

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              + +   ++ LI+G SK G    A+++  EM    ++P+  T+T +  GLC+    D 
Sbjct: 669 QRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDG 728

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           A RL   M+    SP+ V YN L+N   +  ++ EA  L       G VP   +Y  L
Sbjct: 729 AKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 227/449 (50%), Gaps = 13/449 (2%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  +N ++N          A +++ +++KL   P  +TF+ LING+  +GK + A+  
Sbjct: 92  PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D +   G   ++ +Y  +I+GLC+I     A ++  K++    + D V YN ++N  CK
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK 211

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            + V +A  L          P + +++ LI G     +  EA+  + +M  + I PDV  
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + +++  L + G +  A  +L+ M ++G++PD   Y++L+ G+C +  +++A+ +   + 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +    P+ H++ I+I G+ +  MVD+A  LF +M   G  P    +N+LIDGLCK G + 
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRIS 391

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  L  +M     P              D  +  ++++  C    I KA  ++ ++ + 
Sbjct: 392 YAWQLVDEMHNNGIPA-------------DILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P + TYN LI+G CK G +  A  +F++L +KG   ++ TY  +INGL +     +A
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +  +M  NG  P    Y++++    R+
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRK 527



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 231/475 (48%), Gaps = 17/475 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           EL+    ++V+  F +L++ Y  +G+   A   F K+ +    P    +N ++N      
Sbjct: 86  ELKGITPTIVT--FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL  +  ++ L    + V++  LINGL K G+T  A++ML ++  + +  +   Y 
Sbjct: 144 KLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYN 203

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I+ LC+     +AY+L+ +M     SPD V +N+L+ GFC + ++ EA  L       
Sbjct: 204 IIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK 263

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P + ++S L+D L +      A      M ++ + PDVV Y  ++ G     +V  A
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             + S M   G+ P  + YN +I G   + ++D+A SL  E+  +   P+T T+  LI G
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
           +C+ G +  A +L ++M   G    +  +N+LID LCK   ++KA  L  K+ + G  P+
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           ++              +   +++  C  G +  A  +   L   G   +  TYN +ING 
Sbjct: 444 MY--------------TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           CK G  N A  L  +++  G+ PD+VTY T+I  L R D  E A ++  +M   G
Sbjct: 490 CKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 252/518 (48%), Gaps = 18/518 (3%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLN--IAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           D    + SF +M      P +  +N +L   +      +  A+++ +++      P IVT
Sbjct: 37  DVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVT 96

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           F++L+N     G+   A  +  ++ + G  P   T+  +I+G+C   +  EA      + 
Sbjct: 97  FNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVI 156

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G   D V+Y  L+NG CK+     AL +L+  E       +  Y+ +I+ L + K   
Sbjct: 157 ALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVS 216

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +AY  Y +M  ++I PDVV +  +I G    G++K+A  L  +M  + I PD Y ++ L+
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
              C  G + +A+++   + K+  +P+  T++ L+ G C    V+ A+ +F+ M + G  
Sbjct: 277 DALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVA 336

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P    +N +I+GL K   +++A  LF +M   G  P              D  +  ++++
Sbjct: 337 PHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP--------------DTVTYNSLID 382

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G I  A++++ ++  +G   DI+TYNSLI+  CK  +I+ A+ L K+++ +G++P
Sbjct: 383 GLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP 442

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
              TY  LI+GL +  R ++A  +F  +   G + +   Y  ++   C+   F+ A  L 
Sbjct: 443 SMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502

Query: 590 LQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
            +   +    D  + ++ I    +K E E A + L EM
Sbjct: 503 SKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 236/510 (46%), Gaps = 53/510 (10%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N    A  L  +++  G +P  V +N L+N +C L  +  A ++     K G+ P   ++
Sbjct: 73  NHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITF 132

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+G+    +  EA  ++  +       D V Y  +I GL + G+ + A+++L  +  
Sbjct: 133 NTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEG 192

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           + +  D   YN +I   C    +  A  L  E+  +   P+  TF  LI G C  G + +
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGG 455
           A  LF++M      P V  F+ L+D LCK G + +A N+L   M+ G  P          
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP---------- 302

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               D  +  ++++ YC    ++KA  +   ++  G  P   +YN +ING  K+  ++ A
Sbjct: 303 ----DVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEA 358

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L LFKE+  KG+ PD+VTY +LI+GL ++ R   A+++  +M  NG       Y SL+  
Sbjct: 359 LSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDV 418

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            C+      A +L               +K I++           QG+           +
Sbjct: 419 LCKNHHIDKAIAL---------------VKKIKD-----------QGIQP--------SM 444

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             Y I + GLC+ G++K A ++F  L+     V   +   +I+GLCK G  + A +V L 
Sbjct: 445 YTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA-EVLLS 503

Query: 696 TLKNGFILRPRVCNY--LLRSLLFSKDNKK 723
            ++N  I+ P    Y  ++R+L    +N+K
Sbjct: 504 KMENNGII-PDAVTYETIIRALFRKDENEK 532



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 184/359 (51%), Gaps = 2/359 (0%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA-VLNI 142
           Q L ++    V+    ++ ++I+   K      A + + +M      PDV  +N+ +L  
Sbjct: 185 QMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
               QL   A  +++EMV  N  P++ TFS+L++ L K G    A  ML  M ++G++P+
Sbjct: 245 CVVGQL-KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPD 303

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY+ ++ G C +N  ++A  +F  M   G +P   +YN ++NG  K++ VDEAL+L +
Sbjct: 304 VVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFK 363

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G  P   +Y+ LIDGL +  R   A+    +M    I  D++ Y  +I  L +  
Sbjct: 364 EMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNH 423

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +  A+ L+  ++++GI P  Y YN LI G C  G L  A+ +  ++  +    N  T+ 
Sbjct: 424 HIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN 483

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI 441
           I+I G+C+ G+ ++A+ L +KME  G  P    +  +I  L +  E EKA  L  +M I
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMII 542



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 236/534 (44%), Gaps = 58/534 (10%)

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR--RVDEALALLRSFEKDGFVPRL 273
           +N    ++   L+M+ +   P  V +N +L    K        A++L    E  G  P +
Sbjct: 38  VNNDVSSFHRMLRMRPT---PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTI 94

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +++ L++          A++ + K+ +    P  + +  +I G+   GK+K+A+     
Sbjct: 95  VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +   G   D   Y  LI G C +G    A  +  +I  +    +   + I+I  +C++  
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLS 452
           V DA +L+++M      P V  FN+LI G C  G+L++A  LF++M +   NP ++    
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY---- 270

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   +V+  C  G I +A  +L  + + G +PD++TY+SL++G+C V  +
Sbjct: 271 ----------TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           N A  +F  +   G+ P + +Y  +INGL ++   ++A  +F +M   G  P    Y SL
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLN 631
           +   C+  + S A+ L  +   +    D  +  S+ + L K   ++ AI           
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIA---------- 430

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                     L+   +D  ++ ++  +++L++               GLCK G L  A D
Sbjct: 431 ----------LVKKIKDQGIQPSMYTYNILID---------------GLCKGGRLKNAQD 465

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           VF   L  G+ +     N ++  L   K+     A  LL +M++ G   DA  Y
Sbjct: 466 VFQDLLIKGYSVNAWTYNIMINGL--CKEGLFNEAEVLLSKMENNGIIPDAVTY 517



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 125/247 (50%), Gaps = 2/247 (0%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V+ DV  +  L+ GY  V +  KA   F  M      P  + YN ++N   + ++   AL
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           +++ EM      P+ VT++ LI+GL K G+   A +++DEM   GI  +  TY  +I  L
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+ +  D+A  L  K+KD G  P    YN L++G CK  R+  A  + +     G+    
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNA 479

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ +I+GL +   ++EA     KM    I PD V Y  +IR L    + + A KLL +
Sbjct: 480 WTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLRE 539

Query: 334 MRERGIV 340
           M  RG++
Sbjct: 540 MIIRGLL 546



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 35/196 (17%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I  L K       WQ +DE+ +  +      +  LI    K    +KA+    K+K+
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP +Y YN                                   +LI+GL K G+ + 
Sbjct: 438 QGIQPSMYTYN-----------------------------------ILIDGLCKGGRLKN 462

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  ++  +G   N +TY I+I+GLC+    +EA  L  KM+++G  PD V Y  ++ 
Sbjct: 463 AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIR 522

Query: 247 GFCKLRRVDEALALLR 262
              +    ++A  LLR
Sbjct: 523 ALFRKDENEKAEKLLR 538



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 63/134 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I +L K +  D     + +++   +      + +LI G  K G  + A + F  +  
Sbjct: 413 NSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI 472

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                + + YN ++N   ++ LF  A  +  +M     +P+ VT+  +I  L +  + E 
Sbjct: 473 KGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEK 532

Query: 187 AIKMLDEMTQRGIL 200
           A K+L EM  RG+L
Sbjct: 533 AEKLLREMIIRGLL 546


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 181/714 (25%), Positives = 319/714 (44%), Gaps = 39/714 (5%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLK----PNGFDLYWQ 84
           +S T V  ++   KNP      F  A +      +A    V   +L+    P       +
Sbjct: 8   ISPTLVLKLLKAEKNPNAALAIFDSACQHP---GYAHPPFVFHHILRRLMDPKLVVHVGR 64

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE-FDCQPDVYIYNAVLNIA 143
            +D +R+   +   DV    I  Y K    ++AL  F  M + F C P +  +N++LN  
Sbjct: 65  IVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAF 124

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
                +  A   +         PN+ T+++LI    K  + E    +L  M + G+ P+ 
Sbjct: 125 IESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA---L 260
            +Y  +I+ L +     +A  LF +M   G +PD + YN L++GF  LR+ D   A    
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGF--LRKGDFVKANEIW 242

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
            R   +    P + +Y+ +I+GL +  + DE+   + +M + +  PD+  +  MI GLS+
Sbjct: 243 KRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSK 302

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK---RDSLPN 377
           AG    A K+  +M E G+ PD   YNA++ G    G L++      E+W    +++  N
Sbjct: 303 AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKC----FELWNVMSKNNCCN 358

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             ++ +LI G+  N  V+ A   +  + + G       +  LI+GLCK G L KA  +  
Sbjct: 359 IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILE 418

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + E           ++G +   D  +  +MV   C  G++ +A +++ Q+ ++    +  
Sbjct: 419 EAE-----------NEGADL--DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH 465

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            +NSLING+ +   +  A+ + +E++ K   P  V+Y T+INGL + +R  DA+    +M
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEM 525

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGE 615
            + G  P    Y  L+   CR  K  +A +LW Q +     + D  M +  I       +
Sbjct: 526 LEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK-RLKPDLQMHNIIIHGLCTAQK 584

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           V+ A++   +M        L  +   + GL + G   EAL I+  ++E        S   
Sbjct: 585 VDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNI 644

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
              GLC    +  A++     L  G +      N L+R+++   D+K +  Y L
Sbjct: 645 TFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV---DDKPLMEYAL 695


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 245/493 (49%), Gaps = 13/493 (2%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           ++Y  N ++N   R      A +V  +++KL   P+  TF+ LINGL   GK   A+ ++
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           D M + G  P+  TY  +++G+C+      A+ +  KM++     D   Y+ +++  C+ 
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
             +D A++L +  E  G    + +Y+ L+ GL +A ++++     + M   +I P+V+ +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            V++    + GK+++A +L  +M  RGI P+   YN L+ G+C    L +A ++   + +
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  TFT LI G C    VDD  K+F  + K G   +   ++ L+ G C++G+++ 
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  LF +M           +S G   + D  +   +++  C  G + KA +I   L +S 
Sbjct: 422 AEELFQEM-----------VSHG--VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
               I+ Y ++I G CK G +  A  LF  L  KG++P+ +TY  +I+GL +     +A 
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            +  +M ++G  P+   Y +L+    R    + +  L  +        D  S+K + + L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

Query: 612 QKGEVENAIQGLL 624
             GE++ +   +L
Sbjct: 589 LSGELDKSFLDML 601



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 220/445 (49%), Gaps = 15/445 (3%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  F  LI+G    G   KA+    +M E  CQPD+  YN+++N   R     LA  +  
Sbjct: 158 TTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLR 217

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M + N   ++ T+S +I+ L + G  + AI +  EM  +GI  +  TY  ++ GLC+  
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + ++   L   M      P+ + +N LL+ F K  ++ EA  L +     G  P + +Y+
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+DG     R  EA      M   K  PD+V +  +I+G     +V D MK+  ++ +R
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+V +   Y+ L++GFC  G +  A  L  E+     LP+  T+ IL+ G+C NG ++ A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGN 456
            ++F  ++K+     + M+  +I+G+CK G++E A  LF  +   G  P +         
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM-------- 509

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +   M+   C  G + +A  +L ++ E GN P+  TYN+LI    + G++  + 
Sbjct: 510 ------TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563

Query: 517 KLFKELQLKGLRPDSVTYGTLINGL 541
           KL +E++  G   D+ +   +I+ L
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 236/538 (43%), Gaps = 56/538 (10%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SG+  I + D+A  LF +M  S   P  V ++   +   + ++ +  L   +  E +G  
Sbjct: 62  SGIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + + + +I+   R  +   AY+   K+ +   EPD   +  +I GL   GKV  A+ L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVL 180

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  M E G  PD   YN+++ G C  G    A  +  ++ +R+   +  T++ +I  +CR
Sbjct: 181 VDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR 240

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTL 447
           +G +D A  LF +ME  G   SV  +N+L+ GLCKAG+     LL   M   EI  N   
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F                  +++ +   G + +A ++  ++   G  P+IITYN+L++G+C
Sbjct: 301 F----------------NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
               ++ A  +   +      PD VT+ +LI G   V R +D  ++F  + + G   +  
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  L+   C+  K  LA                      EE  Q    E    G+L   
Sbjct: 405 TYSILVQGFCQSGKIKLA----------------------EELFQ----EMVSHGVLP-- 436

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  Y I L GLC +G++++AL IF  L + K  +       +I G+CK G ++
Sbjct: 437 ------DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            A ++F      G  ++P V  Y +      K      A  LL +M+  G   + C Y
Sbjct: 491 DAWNLFCSLPCKG--VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 189/415 (45%), Gaps = 3/415 (0%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           +E   +P    ++  ++ + I ++ +  + F       +R       + S +I  L +  
Sbjct: 185 VENGCQP--DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             D       E+ +  +      +  L+ G  K G           M   +  P+V  +N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +L++  ++     A  +Y EM+     PNI+T++ L++G     +   A  MLD M + 
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
              P+  T+T +I G C + R D+  ++F  +   G   + V Y+ L+ GFC+  ++  A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L +     G +P + +Y  L+DGL    + ++A   +  + + K++  +V+Y  +I G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           + + GKV+DA  L   +  +G+ P+   Y  +I G C  G L +A  L  ++ +  + PN
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             T+  LI    R+G +  + KL  +M+  G          +ID L  +GEL+K+
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS 596


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 241/524 (45%), Gaps = 21/524 (4%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK- 123
           ++ A +  L      D     L E+R   V          +  + + G  ++AL++F + 
Sbjct: 63  AHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 122

Query: 124 MKEFDC-QPDV-YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
           + +  C +P    +YN +++   R+ +      V   M K    PN+ T++LL+  L ++
Sbjct: 123 VHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQN 182

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            +   A KMLDEM  +G  P+  TY  ++S LC + R DEA  +      S   P   +Y
Sbjct: 183 HRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASY 237

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           NA++   C+  R+ E  A++      G  P + +Y+ +++   +A     A A   +M  
Sbjct: 238 NAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVI 297

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
               P+V  +  ++ GL   G+V DA+ +   M   G  P T  YN LI+G C +G L  
Sbjct: 298 TGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKG 357

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+  ++ +    PN  T++ LI G  + G +D A  ++N M ++GC P+V ++  ++ 
Sbjct: 358 ASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVG 417

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             CK     +A  L  KM +   P              +  +  T++   C    + +A 
Sbjct: 418 VFCKKLMFNQAESLIDKMLVENCPP-------------NTVTFNTLIRSLCNCRRVGRAL 464

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +  ++   G  P+  TYN L++G  + GN   AL++  E+Q  G+    VTY T+++GL
Sbjct: 465 GVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGL 524

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
            ++    +A    G+M   G  P    + +++   C+  +  +A
Sbjct: 525 CQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMA 568



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 171/394 (43%), Gaps = 19/394 (4%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++     G M     QP+V  Y  ++N   +     +A A+   MV   C PN+ TF+ L
Sbjct: 251 QEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTAL 310

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           + GL   G+   A+ M   M   G  P+  +Y ++I GLC +     A  +   M+  GC
Sbjct: 311 VGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGC 370

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+   Y+ L++GF K   +D A+++     + G  P +  Y+ ++    +   +++A +
Sbjct: 371 FPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAES 430

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              KM  E   P+ V +  +IR L    +V  A+ +  +MR  G  P+   YN L+ G  
Sbjct: 431 LIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLF 490

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G    A  + +E+       +  T+  ++ G+C+  M  +A     +M   G  P   
Sbjct: 491 REGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAF 550

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEI---GKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            F A+I   CK GE+  A  +   M +   G+N  ++                  ++ + 
Sbjct: 551 TFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVY----------------TILMAEL 594

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           C    +  A   L+++   G  P+ +T+N L+ G
Sbjct: 595 CNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 149/323 (46%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+ G +  G    AL+ +  M      P    YN ++           A +V  +M 
Sbjct: 307 FTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN  T+S LI+G SK+G  + AI + ++MT+ G  PN   YT ++   C+    +
Sbjct: 367 QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFN 426

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  KM    C P+ V +N L+   C  RRV  AL +     + G  P   +Y+ L+
Sbjct: 427 QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELL 486

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GLFR     +A     +M    IE  +V Y  ++ GL +    ++AM  +  M  RGI 
Sbjct: 487 HGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQ 546

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD + + A+I  +C  G +  A  +   +   +   N   +TIL+  +C    ++DA   
Sbjct: 547 PDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVY 606

Query: 401 FNKMEKAGCFPSVGMFNALIDGL 423
             KM   G +P+   +N L+ G+
Sbjct: 607 LLKMLYEGIYPNTVTWNVLVRGV 629



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 154/339 (45%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +++ + K G+   A     +M    C P+V  + A++   F       AL ++  MV
Sbjct: 272 YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMV 331

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+ V++++LI GL   G  + A  +L++M Q G  PN  TY+ +I G  +    D
Sbjct: 332 AEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLD 391

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  ++  M  SGC P+ V Y  ++  FCK    ++A +L+     +   P   +++ LI
Sbjct: 392 GAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLI 451

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L   +R   A   + +M      P+   Y  ++ GL   G   DA++++ +M+  GI 
Sbjct: 452 RSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIE 511

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
                YN ++ G C + +  +A      +  R   P+  TFT +I   C+ G V  A  +
Sbjct: 512 LSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWI 571

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
              M    C  ++ ++  L+  LC   +LE A +   KM
Sbjct: 572 LGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKM 610



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 134/291 (46%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLI G   VGD + A      M++  C P+   Y+ +++   +      A++++ +M 
Sbjct: 342 YNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMT 401

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+V ++ ++    K      A  ++D+M      PN  T+  +I  LC   R  
Sbjct: 402 RSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVG 461

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +F +M+  GC P+   YN LL+G  +     +AL ++   +  G    L +Y+ ++
Sbjct: 462 RALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVV 521

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL + +   EA  +  +M    I+PD   +  +I    + G+V+ A  +L  M      
Sbjct: 522 SGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCG 581

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +   Y  L+   C+   L+ A    +++      PNT T+ +L+ G+ RN
Sbjct: 582 RNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/334 (20%), Positives = 129/334 (38%), Gaps = 55/334 (16%)

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--EIG-KNPTLF 448
           G VD  Q    +M   G   + G   A +    +AG  ++A   FY+   ++G   PT  
Sbjct: 75  GDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPT-- 132

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                   R+++      +++      ++     +   + + G  P++ TYN L+   C+
Sbjct: 133 ------APRLYNH-----LIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQ 181

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              +  A K+  E+  KG  PD VTYGT+++ L  + R ++A  +    P     P  A 
Sbjct: 182 NHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP-----PVAAS 236

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           Y +++   CR  +    F++                  + + + +G   N I        
Sbjct: 237 YNAVILALCREFRMQEVFAV------------------VGDMVGRGLQPNVIT------- 271

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
                    YT  +   C+ G+++ A  I + +V         +   L+ GL   G +  
Sbjct: 272 ---------YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHD 322

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNK 722
           A+D++   +  G+       N L+R L    D K
Sbjct: 323 ALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLK 356



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 66/130 (50%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q + E+++  + +    +  ++SG  ++    +A+   G+M     QPD + + A+++  
Sbjct: 500 QMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAY 559

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            ++    +A  +   M  +NC  NI+ +++L+  L    K E A+  L +M   GI PN 
Sbjct: 560 CKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNT 619

Query: 204 FTYTIVISGL 213
            T+ +++ G+
Sbjct: 620 VTWNVLVRGV 629


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 281/610 (46%), Gaps = 32/610 (5%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + G+ E  L ++ +MK F   PDVY +  V    F+ +    AL V+ EM ++   P+  
Sbjct: 319 ETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDAR 378

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            +S  + GL   GK ++A  +L E+ +  +      Y +V+ GLC+  R DEA +L    
Sbjct: 379 GYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENK 438

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G +PD   Y+ L+  +CK+  +  A+    +    G        S L+    +    
Sbjct: 439 ARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMT 498

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA A++ K  +  +  D V+Y + +    + G + +A+KLL++M+  G+ PD   Y  L
Sbjct: 499 SEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCL 558

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G+C  G +  A+ +  E+ K +  P+  T+ IL  G C++G+V +   L ++M   G 
Sbjct: 559 ISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGL 618

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+   +   I G C+ G L +A +LF  +E            +G +  H +    +MV 
Sbjct: 619 EPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE-----------EKGID--HIEVMYSSMVC 665

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            Y  +G    AY + +++A  GNL D  + + LIN  C+VGN+ GA  + K +    + P
Sbjct: 666 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 725

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D ++Y  LI+   +    + A   F  M Q G +    VY  LM   C+  +   A  L+
Sbjct: 726 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLF 785

Query: 590 LQYLRDISGRDDESMKSI------EEFLQKGEVENAIQG---LLEMDF-----KLNDFQL 635
           +Q + ++  + D    ++      +E LQ+G    A +    LL  +       + D Q+
Sbjct: 786 VQ-MTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 844

Query: 636 AP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
            P    YT+ + G C+   + EA  +F  +++        +   LI+G C +G +  A D
Sbjct: 845 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 904

Query: 692 VFLYTLKNGF 701
           +    +  G 
Sbjct: 905 LLQEMIDKGI 914



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 224/489 (45%), Gaps = 13/489 (2%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI  Y K+G+   A++ +  M     + + +I + +L   FRK         Y+   K +
Sbjct: 453 LIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ-CFRKLGMTSEAIAYFLKFKDS 511

Query: 164 CLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            L  + V +++ ++   K+G    A+K+L+EM   G+ P+K  YT +ISG C       A
Sbjct: 512 GLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNA 571

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++F +M  +   PD V YN L +GFCK   V E   LL      G  P   +Y   I G
Sbjct: 572 QQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVG 631

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R     EA   +  + E+ I+   V+Y  M+ G   +G    A  L   +  +G + D
Sbjct: 632 FCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVD 691

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            +  + LI   C +G +  A ++   + + D +P+  +++ LI   C+NG +D A   F+
Sbjct: 692 HFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 751

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--FLRLSQGGNRVH 459
            M + G    V ++  L++G CKAG L++A  LF +M  +G  P +  +  L  G    H
Sbjct: 752 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDG----H 807

Query: 460 DKASLQT----MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
            K +LQ     + ++  +  L     K+L  + +    PD+  Y  LI+G CK   +  A
Sbjct: 808 LKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEA 867

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +LF E+  KGL PD+  Y  LING         A  +  +M   G  P    +  L   
Sbjct: 868 RELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQS 927

Query: 576 SCRRRKFSL 584
           S R RK   
Sbjct: 928 SLRSRKIQF 936



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 245/549 (44%), Gaps = 26/549 (4%)

Query: 170 TFSLLINGLSKSGKT----EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           + S +++ L K+  T    +  I +   + + G++P+ +T+ +++  + +    +     
Sbjct: 270 SLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAA 329

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           + +MK    +PD   +  +     + ++VDEAL +     + G  P    YS  + GL  
Sbjct: 330 YNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCD 389

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +YD AY   +++  EK+  + + Y +++ GL +  ++ +A KLL +   +G  PD Y 
Sbjct: 390 CGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYG 449

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI+ +C +G L  A      +       N H  + L+    + GM  +A   F K +
Sbjct: 450 YSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFK 509

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
            +G      ++N  +D  CK G + +A  L  +M+              G    DK    
Sbjct: 510 DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY-------------GGLTPDKIHYT 556

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++  YC  G +  A ++  ++ ++   PDI+TYN L +GFCK G +     L   +  +
Sbjct: 557 CLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQ 616

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL P+S+TYG  I G  R     +A  +F  + + G      +Y S++           A
Sbjct: 617 GLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHA 676

Query: 586 FSLWLQYLRDISGRDDESM-KSIEEFLQKGEVE---NAIQGLLEMDFKLNDFQLAPYTIW 641
           + L+++  R  +  D  S  K I +  + G V+   N  + +LE D   +   +  Y+  
Sbjct: 677 YMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD---VISYSKL 733

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           +   CQ+G + +A   F  +V+    V       L++G CK G L  A  +F+     G 
Sbjct: 734 ISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG- 792

Query: 702 ILRPRVCNY 710
            ++P V  Y
Sbjct: 793 -IKPDVIAY 800



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 228/509 (44%), Gaps = 46/509 (9%)

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           CS  F+  + L+        V   + L     + G VP + +++ L+  +     Y+   
Sbjct: 269 CSLSFMV-DCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVL 327

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           A Y +M   ++ PDV  + ++ R L +A KV +A+++ ++M E G+ PD   Y++ + G 
Sbjct: 328 AAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGL 387

Query: 354 CDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           CD G  D A  +  EI  R+ +P     + +++ G+C+   +D+A+KL     + G  P 
Sbjct: 388 CDCGKYDLAYVILQEI-NREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPD 446

Query: 413 VGMFNALIDGLCKAGELEKA----------------NLLFYKME-------IGKNPTLFL 449
           V  ++ LI   CK G L  A                +++ Y ++         +    FL
Sbjct: 447 VYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFL 506

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           +    G  + DK      ++ YC  G +++A K+L ++   G  PD I Y  LI+G+C  
Sbjct: 507 KFKDSGLHL-DKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLK 565

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A ++F+E+    + PD VTY  L +G  +     + F +  +M   G  P+   Y
Sbjct: 566 GEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTY 625

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD-ESMKS--IEEFLQKGEVENAIQGLLEM 626
              +   CR    S A  L+   + +  G D  E M S  +  +L  G  ++A    + +
Sbjct: 626 GIAIVGFCRGGNLSEAEVLF--NVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 683

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             + N       +  +  LC+ G V+ A N+  +++E   +    S  KLI   C+ G +
Sbjct: 684 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDM 743

Query: 687 D-------------LAMDVFLYT-LKNGF 701
           D             L++DV +YT L NG+
Sbjct: 744 DKAHLWFHDMVQRGLSVDVIVYTILMNGY 772



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 164/406 (40%), Gaps = 86/406 (21%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ + +  Y K G+  +A++   +MK     PD   Y  +++    K     A  V+ EM
Sbjct: 519 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 578

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR- 218
           +K N  P+IVT+++L +G  KSG       +LD M  +G+ PN  TY I I G C+    
Sbjct: 579 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 638

Query: 219 ----------------------------------ADEAYRLFLKMKDSGCSPDFVAYNAL 244
                                              D AY LF+++   G   D  + + L
Sbjct: 639 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 698

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +N  C++  V  A  + +   +   VP + SYS LI    +    D+A+ W+  M +  +
Sbjct: 699 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 758

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAM------------------------------------ 328
             DV++Y +++ G  +AG++++A                                     
Sbjct: 759 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 818

Query: 329 ---------------KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
                          KLLS M++  I PD  CY  LI G C    L +AR L  E+ ++ 
Sbjct: 819 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 878

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             P+ + +T LI G C  G +  A+ L  +M   G  P    F+ L
Sbjct: 879 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 20/322 (6%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL    LD +    +   S  + + I G+ + G+  +A   F  ++E        +Y++
Sbjct: 607 FDL----LDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSS 662

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++           A  ++  + +   L +  + S LIN L + G  + A  +   M +  
Sbjct: 663 MVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHD 722

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           ++P+  +Y+ +IS  CQ    D+A+  F  M   G S D + Y  L+NG+CK  R+ EA 
Sbjct: 723 VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEAC 782

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD--EAYAWYRKMF--------------EE 302
            L       G  P + +Y+ L+DG  +       E  A  R+ F              + 
Sbjct: 783 QLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDM 842

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +IEPDV  Y V+I G  +A  + +A +L  +M ++G+ PD Y Y ALI G+C  G + +A
Sbjct: 843 QIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKA 902

Query: 363 RSLQVEIWKRDSLPNTHTFTIL 384
             L  E+  +   P+  TF++L
Sbjct: 903 EDLLQEMIDKGIEPDELTFSVL 924



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 200/492 (40%), Gaps = 64/492 (13%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I+       V+  + L S +   G+VP  + +N L+K   + G  +   +   E+    
Sbjct: 278 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 337

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS--------VGM---------- 415
             P+ +TF I+   + +   VD+A +++ +M + G  P         +G+          
Sbjct: 338 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 397

Query: 416 -----------------FNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLF------LRL 451
                            +N ++DGLCK   L++A  LL  K   G NP ++         
Sbjct: 398 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 457

Query: 452 SQGGNRV----HDKASLQTMVEQYCTA-----------GLIHKAYKILMQLAESGNLPDI 496
            + GN +    H +A +   +E  C             G+  +A    ++  +SG   D 
Sbjct: 458 CKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 517

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           + YN  ++ +CK GN+N A+KL  E++  GL PD + Y  LI+G       ++A ++F +
Sbjct: 518 VIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE 577

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK---SIEEFLQK 613
           M +    P    Y  L +  C+       F L L  + D  G +  S+    +I  F + 
Sbjct: 578 MLKANIEPDIVTYNILASGFCKSGLVMEVFDL-LDRMAD-QGLEPNSLTYGIAIVGFCRG 635

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G +  A      ++ K  D     Y+  + G    G    A  +F  +     +V   SC
Sbjct: 636 GNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 695

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            KLI+ LC+ G +  A +V    L++  +  P V +Y     ++ ++     A+     M
Sbjct: 696 SKLINDLCRVGNVQGASNVCKIMLEHDVV--PDVISYSKLISIYCQNGDMDKAHLWFHDM 753

Query: 734 KSVGYDLDACLY 745
              G  +D  +Y
Sbjct: 754 VQRGLSVDVIVY 765



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 18/211 (8%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VV DV  +  LIS Y + GD +KA   F  M +     DV +Y  ++N   +      A 
Sbjct: 723 VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEAC 782

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSK----SGKTEVAI------------KMLDEMTQR 197
            ++ +M  L   P+++ +++L++G  K     G   +A             K+L  M   
Sbjct: 783 QLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDM 842

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            I P+   YT++I G C+     EA  LF +M   G +PD  AY AL+NG+C    + +A
Sbjct: 843 QIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKA 902

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
             LL+     G  P   ++S L     R+++
Sbjct: 903 EDLLQEMIDKGIEPDELTFSVLNQSSLRSRK 933



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 16/206 (7%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +IS+  +    D       ++    +SV   V+ +L++GY K G  ++A + F +M
Sbjct: 729 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQM 788

Query: 125 KEFDCQPDVYIYNAVLN-------------IAFRKQLFLLAL---AVYYEMVKLNCLPNI 168
                +PDV  Y  +L+             IA  ++ FLL      +   M  +   P++
Sbjct: 789 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDV 848

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +++LI+G  K+     A ++ DEM Q+G+ P+ + YT +I+G C      +A  L  +
Sbjct: 849 PCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQE 908

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRV 254
           M D G  PD + ++ L     + R++
Sbjct: 909 MIDKGIEPDELTFSVLNQSSLRSRKI 934


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 227/472 (48%), Gaps = 26/472 (5%)

Query: 115 EKALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            K L+SF KMK +               QPD+   N ++N            +V  +++K
Sbjct: 63  NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P+ VT + LI GL   G+ + A+   D++  +G   N+ +Y  +I+G+C+I     
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRA 182

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A +   K+      PD V YN +++  CK + V EA  L       G    + +Y+ LI 
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G     +  EA     +M  + I P+V  Y +++  L + GKVK+A  +L+ M +  + P
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   Y+ L+ G+  +  + +A+ +   +      P+ HT+TILI G C+N MVD+A  LF
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M +    P +  +++LIDGLCK+G +     L  +M     P              D 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPA-------------DV 409

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++  C  G + +A  +  ++ +    P+I T+  L++G CK G +  A ++F++
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           L  KG   +  TY  +ING  +    E+A  +  +M  NGC P+   +++++
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 213/402 (52%), Gaps = 10/402 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
           Q+ F F + A   KR   +  ++  ++ L+K  G  L  Q        D+L +    +  
Sbjct: 109 QITFGFSVLAKILKR--GYPPDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K+GD   A++   K+     +PDV +YN +++   + QL   A  ++ E
Sbjct: 165 VSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       ++VT++ LI G    GK + AI +L+EM  + I PN +TY I++  LC+  +
Sbjct: 225 MAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +   M  +   PD + Y+ L++G+  +  V +A  +  +    G  P + +Y+ 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  + K  DEA   +++M ++ + P +V Y  +I GL ++G++     L+ +MR+RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              D   Y++LI G C  G LD+A +L  ++  ++  PN  TFTIL+ G+C+ G + DAQ
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           ++F  +   G   +V  +N +I+G CK G LE+A  +  KME
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 242/529 (45%), Gaps = 28/529 (5%)

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           I   D+A   F +M     +P  + +N +L+ F K++    A++L    E  G  P L +
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + LI+      +    ++   K+ +    PD V    +I+GL   G+VK A+     + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G   +   Y  LI G C +G    A     +I  R + P+   +  +I  MC+  +V 
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQG 454
           +A  LF++M   G    V  +N LI G C  G+L++A  L  +M +   NP ++      
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVY------ 270

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +   +V+  C  G + +A  +L  + ++   PD+ITY++L++G+  V  +  
Sbjct: 271 --------TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  +F  + L G+ PD  TY  LING  +    ++A  +F +M Q    P    Y SL+ 
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
             C+  + S  + L +  +RD     D    S  I+   + G ++ AI     +  K+ D
Sbjct: 383 GLCKSGRISYVWDL-IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI----ALFNKMKD 437

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
            ++ P    +TI L GLC+ G++K+A  +F  L+     +   +   +I+G CK+G L+ 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           A+ +      NG I        ++ +L    +N K  A  LL +M + G
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDK--AEKLLRQMIARG 544



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 167/326 (51%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +    E+    +S     +  LI G+  VG  ++A+    +M      P+VY YN +++ 
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             ++     A +V   M+K    P+++T+S L++G     + + A  + + M+  G+ P+
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYTI+I+G C+    DEA  LF +M      P  V Y++L++G CK  R+     L+ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLID 398

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G    + +YS LIDGL +    D A A + KM +++I P++  + +++ GL + G
Sbjct: 399 EMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGG 458

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++KDA ++  D+  +G   + Y YN +I G C  GLL++A ++  ++     +PN  TF 
Sbjct: 459 RLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFE 518

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAG 408
            +I  + +    D A+KL  +M   G
Sbjct: 519 TIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 122/240 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY+ V + +KA   F  M      PDV+ Y  ++N   + ++   AL ++ EM 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           + N +P IVT+S LI+GL KSG+      ++DEM  RG   +  TY+ +I GLC+    D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  LF KMKD    P+   +  LL+G CK  R+ +A  + +     G+   + +Y+ +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  +    +EA     KM +    P+   +  +I  L +  +   A KLL  M  RG++
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 75/196 (38%), Gaps = 35/196 (17%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K        F    ++  +    + S++I  L K       W  +DE+R         
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPD--------------------------- 132
            +  LI G  K G  ++A+  F KMK+ + +P+                           
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 133 --------VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
                   VY YN ++N   ++ L   AL +  +M    C+PN  TF  +I  L K  + 
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 185 EVAIKMLDEMTQRGIL 200
           + A K+L +M  RG+L
Sbjct: 531 DKAEKLLRQMIARGLL 546


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 233/480 (48%), Gaps = 17/480 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++ +  M+++   P+ V F+ L+  ++K       + +  +M   GI PN +T  I+I+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 212 GLCQINRAD--EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
             C +NR    EA  LF KM   G  PD V Y  L+NG CK+     A+ LL S  +   
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ +ID L + ++  EA+  + +M  + I PD+  Y  +I  L    + K    
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 224

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS-LPNTHTFTILICGM 388
           LL++M +  I+PD   +N ++   C  G + +A  +  ++ +R   +PN  ++  LI G 
Sbjct: 225 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C+   +D A  LF +M +    P    ++ LI GLC    L+ A  LF++M         
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM--------- 335

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +  SQ  N V    + + +++  C    + +A  +L  +  S   PDI   N  I+G C+
Sbjct: 336 VACSQIPNLV----TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G +  A  LF  L  KGL+PD  TY  +INGL R    ++A ++F +M +NGCT +  +
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 451

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           Y ++     R  + S A  L  + +      D  +M    + L    ++ +++ +L  DF
Sbjct: 452 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR-DF 510



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 212/450 (47%), Gaps = 16/450 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+ SF +M      P    +N +L    + +     L++ ++M      PNI T  +L
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 175 INGLSK--SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           IN       GK   A+ + D+M   G  P+  TY  +I+GLC++     A RL   M   
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            C P+  AYN +++  CK R+V EA  L       G  P + +Y+ LI  L     +   
Sbjct: 163 NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHV 222

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER-GIVPDTYCYNALIK 351
                +M + KI PDVV +  ++  L + GKV +A  ++  M +R G +P+   YN LI 
Sbjct: 223 ATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLIN 282

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C +  +D+A  L  E+ +++ +P+T T++ LI G+C    + DA  LF++M      P
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           ++  +  L+D LCK   L +A  L   +E             G N   D       ++  
Sbjct: 343 NLVTYRILLDYLCKNRYLAEAMALLKAIE-------------GSNLDPDIQVNNIAIDGM 389

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C AG +  A  +   L+  G  PD+ TY+ +ING C+ G ++ A KLF+E+   G   + 
Sbjct: 390 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 449

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
             Y T+  G  R +    A ++  +M   G
Sbjct: 450 CIYNTITRGFLRNNETSRAIQLLQEMVARG 479



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 184/341 (53%), Gaps = 1/341 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+G  KVG+   A+   G M + +CQP+V+ YN +++   + +    A  ++ EM
Sbjct: 135 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 194

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P+I T++ LI+ L    + +    +L+EM    I+P+  ++  V+  LC+  + 
Sbjct: 195 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 254

Query: 220 DEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            EA+ +  KM +  GC P+ ++YN L+NG+CK++R+D+A+ L     +   +P   +YS 
Sbjct: 255 TEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 314

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL   +R  +A A + +M      P++V Y +++  L +   + +AM LL  +    
Sbjct: 315 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 374

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD    N  I G C  G L+ AR L   +  +   P+  T++I+I G+CR G++D+A 
Sbjct: 375 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 434

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           KLF +M++ GC  +  ++N +  G  +  E  +A  L  +M
Sbjct: 435 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 223/475 (46%), Gaps = 52/475 (10%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE--AGKVKDAM 328
           P    ++ L+  + + K +    +   +M    I P++    ++I        GK+ +A+
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L   M   G  PD   Y  LI G C +G    A  L   + +++  PN   +  +I  +
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C++  V +A  LF++M   G  P +  +N+LI  LC   E +    L  +M   K     
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK----- 233

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN-LPDIITYNSLINGFC 507
                    + D  S  T+V+  C  G + +A+ ++ ++ + G  +P++I+YN+LING+C
Sbjct: 234 --------IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC 285

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K+  I+ A+ LF E+  + L PD+VTY TLI+GL  V+R +DA  +F +M      P+  
Sbjct: 286 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 345

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y+ L+ + C+ R  + A +L    L+ I G +                       L+ D
Sbjct: 346 TYRILLDYLCKNRYLAEAMAL----LKAIEGSN-----------------------LDPD 378

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            ++N+       I + G+C+ G+++ A ++FS L          +   +I+GLC+RG LD
Sbjct: 379 IQVNN-------IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 431

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            A  +F    +NG  L   + N + R  L  ++N+   A  LL  M + G+  DA
Sbjct: 432 EASKLFREMDENGCTLNGCIYNTITRGFL--RNNETSRAIQLLQEMVARGFSADA 484



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 217/477 (45%), Gaps = 55/477 (11%)

Query: 100 VFFVLISGYYKV--GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
              +LI+ +  +  G   +AL  F KM     +PDV  Y  ++N   +      A+ +  
Sbjct: 98  TLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 157

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            MV+ NC PN+  ++ +I+ L K  +   A  +  EM  +GI P+ FTY  +I  LC + 
Sbjct: 158 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 217

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSY 276
                  L  +M DS   PD V++N +++  CK  +V EA  ++ +  ++ G +P + SY
Sbjct: 218 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISY 277

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI+G  + +R D+A   + +M  +++ PD V Y  +I GL    +++DA+ L  +M  
Sbjct: 278 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 337

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
              +P+   Y  L+   C    L +A +L   I   +  P+     I I GMCR G ++ 
Sbjct: 338 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A+ LF+ +   G  P V  ++ +I+GLC+ G L++A+ LF +M+                
Sbjct: 398 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD---------------- 441

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                                           E+G   +   YN++  GF +    + A+
Sbjct: 442 --------------------------------ENGCTLNGCIYNTITRGFLRNNETSRAI 469

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +L +E+  +G   D+ T    +  L     ++   +   Q+ ++ C     +Y+++M
Sbjct: 470 QLLQEMVARGFSADASTMTLFVKMLS----DDGLDQSLKQILRDFCKQKSWIYENVM 522



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 159/332 (47%), Gaps = 2/332 (0%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N+ +I  L K       +    E+ +  +S     +  LI     + + +       
Sbjct: 169 FAYNT-IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-CLPNIVTFSLLINGLSKS 181
           +M +    PDV  +N V++   ++     A  V  +M++   C+PN+++++ LING  K 
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + + A+ +  EM ++ ++P+  TY+ +I GLC + R  +A  LF +M      P+ V Y
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             LL+  CK R + EA+ALL++ E     P +   +  IDG+ RA   + A   +  +  
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + ++PDV  Y +MI GL   G + +A KL  +M E G   +   YN + +GF       +
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           A  L  E+  R    +  T T+ +  +  +G+
Sbjct: 468 AIQLLQEMVARGFSADASTMTLFVKMLSDDGL 499



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 23/307 (7%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLS 452
           +D A   FN+M +    PS   FN L+  + K         L ++M+  G  P ++    
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY---- 97

Query: 453 QGGNRVHDKASLQTMVEQYC--TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                     +L  ++  +C    G I +A  +  ++   G  PD++TY +LING CKVG
Sbjct: 98  ----------TLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVG 147

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N + A++L   +  K  +P+   Y T+I+ L +  +  +AF +F +M   G +P    Y 
Sbjct: 148 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 207

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK----GEVENAIQGLLEM 626
           SL+   C   ++    +L  + +      D  S  ++ + L K     E  + +  +++ 
Sbjct: 208 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
              + +  +  Y   + G C+  ++ +A+ +F  +   + I    +   LIHGLC    L
Sbjct: 268 GGCMPN--VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 325

Query: 687 DLAMDVF 693
             A+ +F
Sbjct: 326 QDAIALF 332


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 169/687 (24%), Positives = 295/687 (42%), Gaps = 87/687 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F W +K     S  + S ++ +L+  +  D+  +  +E+  G       V+  + + + K
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKG-----LGVYEFVFNSFLK 217

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            G+ EK L     + E    P +   N +L          +A   +  MV+    PN+VT
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF---- 226
           FS LIN   K  + + A  + + M ++GI+P+   Y+I+I+GL +  + +E   LF    
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337

Query: 227 -------------------------------LKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                                           +M   G SP+ V Y+ L+NG C+  RV 
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           EA  +     K G  P + +YS LIDG  +++   + +  Y  M  +   PDVV+  ++I
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GLS  G + +A++      +RG+  + Y +NALI G   L        + + +     +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVI 517

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+  T+T+L+ G+   G +D+A  LF ++ K G  P   ++  LIDG CK  +      +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F             +L Q      D      ++  +   G +    ++L ++ + G  PD
Sbjct: 578 F-------------KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPD 624

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I+TYN++I G+C +   + A+KLF+ L+    +P+++T+  LI+   +  R +DA  IF 
Sbjct: 625 IVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFS 684

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M + G  P+   Y  L+    +      AF L+ + L D    +               
Sbjct: 685 SMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPN--------------- 729

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
                              +  Y+I + GLC+ G ++EA   F   +    +    +   
Sbjct: 730 -------------------IVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           LI G CK G L  AM ++ + L NG +
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIM 797



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 254/524 (48%), Gaps = 18/524 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ +LI+G ++ G  E+    F        + DV I++++++   R      A+ VY  M
Sbjct: 312 IYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRM 371

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K    PN+VT+S+LINGL ++G+   A  +  ++ ++G+ P+  TY+ +I G C+    
Sbjct: 372 LKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENL 431

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            + + L+  M   G  PD V  + L+NG  +   +DEAL       K G       ++ L
Sbjct: 432 RDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNAL 491

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG FR KR  +    Y  M   K+ PDVV Y V+++GL+E G++ +A+ L   + ++G 
Sbjct: 492 IDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGF 551

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQV-EIWKRDSL-PNTHTFTILICGMCRNGMVDDA 397
            PD   Y  LI GFC     D A  LQ+ ++ + + + P+   + +LI    R G V++ 
Sbjct: 552 SPDHIIYCTLIDGFCK--KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENV 609

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
            +L  ++ K G  P +  +N +I G C      KA  LF  ++ G+              
Sbjct: 610 LELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP----------- 658

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             +  +   +++ YC  G +  A  I   + E G  P+I+TY+ LI+G+ K  N   A +
Sbjct: 659 --NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L++++    + P+ V+Y  LI+GL +    E+A   F         P    Y  L+   C
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF-LQKGEVENAI 620
           +  + + A  L+   L +    DD   K++ E+  Q  + +N +
Sbjct: 777 KVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAKNCV 820



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 233/519 (44%), Gaps = 26/519 (5%)

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           ++ G +P  V Y+ LL+ +C+   VD A+       K G      + S ++D L  + R 
Sbjct: 133 RNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRI 191

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D     Y +M +      + +Y  +     + G+V+  +     + ERG+VP     N +
Sbjct: 192 DVILENYEEMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKI 246

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +KG C    +  A      + +    PN  TF+ LI   C+   +D+A  L+N M + G 
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P + +++ LI+GL +AG+LE+ N LF  M + +   +            D     ++++
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLF-SMALARGVKM------------DVVIFSSIMD 353

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            Y   G + KA ++  ++ + G  P+++TY+ LING C+ G +  A  +F ++  +GL P
Sbjct: 354 AYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             +TY +LI+G  + +   D F ++G M + G  P   V   L+    R+     A   +
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473

Query: 590 LQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            Q + R ++  +      I+   +     + ++  + M        +  YT+ + GL + 
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           G++ EAL +F  L+  K   +P   +   LI G CK+      + +F     NG    P 
Sbjct: 534 GRLDEALALFFQLL--KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF--PD 589

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +C Y +   +F ++    +   LL  +   G + D   Y
Sbjct: 590 ICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 168/402 (41%), Gaps = 28/402 (6%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +R R   P T  ++ ++  F +L +L +            S P+T  ++ L+   CRNGM
Sbjct: 100 LRHRMFDPATRVFDRMVGQFGNLEVLGEFHG---SFRNYGSNPST-VYSFLLHCYCRNGM 155

Query: 394 VDDAQKLFNKMEKAGC----FPSVGMFNALIDG------------LCKA-GELEKA-NLL 435
           VD A   F  M K G     + +  M + LID             +CK  G  E   N  
Sbjct: 156 VDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSF 215

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             + E+ K       L + G  V        +++  C    I  A      +  SG  P+
Sbjct: 216 LKRGEVEKGLNFHRALVERG-LVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPN 274

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++T+++LIN +CK   ++ A  L+  +  KG+ PD V Y  LINGL R  + E+   +F 
Sbjct: 275 LVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFS 334

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQKG 614
                G      ++ S+M    R      A  ++ + L++ IS         I    + G
Sbjct: 335 MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNG 394

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            V  A     ++  +  +  +  Y+  + G C+   +++   ++ +++    +     C 
Sbjct: 395 RVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCS 454

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            LI+GL ++G +D A+  F   +K G  L     NYL  +L+
Sbjct: 455 MLINGLSRQGMMDEALRFFFQAVKRGLTLN----NYLFNALI 492



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 80/161 (49%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           +  + L+ G     +  F +LI  Y K G  + A+  F  M E   +P++  Y+ +++  
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGY 705

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F+ +    A  +Y +M+     PNIV++S+LI+GL K G  E A         R +LP+ 
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDV 765

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             Y I+I G C++ R  EA  L+  M  +G  PD +   AL
Sbjct: 766 IAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 281/610 (46%), Gaps = 32/610 (5%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + G+ E  L ++ +MK F   PDVY +  V    F+ +    AL V+ EM ++   P+  
Sbjct: 201 ETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDAR 260

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            +S  + GL   GK ++A  +L E+ +  +      Y +V+ GLC+  R DEA +L    
Sbjct: 261 GYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENK 320

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G +PD   Y+ L+  +CK+  +  A+    +    G        S L+    +    
Sbjct: 321 ARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMT 380

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EA A++ K  +  +  D V+Y + +    + G + +A+KLL++M+  G+ PD   Y  L
Sbjct: 381 SEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCL 440

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G+C  G +  A+ +  E+ K +  P+  T+ IL  G C++G+V +   L ++M   G 
Sbjct: 441 ISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGL 500

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+   +   I G C+ G L +A +LF  +E            +G +  H +    +MV 
Sbjct: 501 EPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE-----------EKGID--HIEVMYSSMVC 547

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            Y  +G    AY + +++A  GNL D  + + LIN  C+VGN+ GA  + K +    + P
Sbjct: 548 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 607

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D ++Y  LI+   +    + A   F  M Q G +    VY  LM   C+  +   A  L+
Sbjct: 608 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLF 667

Query: 590 LQYLRDISGRDDESMKSI------EEFLQKGEVENAIQG---LLEMDF-----KLNDFQL 635
           +Q + ++  + D    ++      +E LQ+G    A +    LL  +       + D Q+
Sbjct: 668 VQ-MTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQI 726

Query: 636 AP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
            P    YT+ + G C+   + EA  +F  +++        +   LI+G C +G +  A D
Sbjct: 727 EPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAED 786

Query: 692 VFLYTLKNGF 701
           +    +  G 
Sbjct: 787 LLQEMIDKGI 796



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 224/489 (45%), Gaps = 13/489 (2%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI  Y K+G+   A++ +  M     + + +I + +L   FRK         Y+   K +
Sbjct: 335 LIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQ-CFRKLGMTSEAIAYFLKFKDS 393

Query: 164 CLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            L  + V +++ ++   K+G    A+K+L+EM   G+ P+K  YT +ISG C       A
Sbjct: 394 GLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNA 453

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            ++F +M  +   PD V YN L +GFCK   V E   LL      G  P   +Y   I G
Sbjct: 454 QQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVG 513

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R     EA   +  + E+ I+   V+Y  M+ G   +G    A  L   +  +G + D
Sbjct: 514 FCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVD 573

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            +  + LI   C +G +  A ++   + + D +P+  +++ LI   C+NG +D A   F+
Sbjct: 574 HFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFH 633

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--FLRLSQGGNRVH 459
            M + G    V ++  L++G CKAG L++A  LF +M  +G  P +  +  L  G    H
Sbjct: 634 DMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDG----H 689

Query: 460 DKASLQT----MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
            K +LQ     + ++  +  L     K+L  + +    PD+  Y  LI+G CK   +  A
Sbjct: 690 LKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEA 749

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            +LF E+  KGL PD+  Y  LING         A  +  +M   G  P    +  L   
Sbjct: 750 RELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQS 809

Query: 576 SCRRRKFSL 584
           S R RK   
Sbjct: 810 SLRSRKIQF 818



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 132/549 (24%), Positives = 245/549 (44%), Gaps = 26/549 (4%)

Query: 170 TFSLLINGLSKSGKT----EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           + S +++ L K+  T    +  I +   + + G++P+ +T+ +++  + +    +     
Sbjct: 152 SLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAA 211

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           + +MK    +PD   +  +     + ++VDEAL +     + G  P    YS  + GL  
Sbjct: 212 YNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCD 271

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +YD AY   +++  EK+  + + Y +++ GL +  ++ +A KLL +   +G  PD Y 
Sbjct: 272 CGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYG 331

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI+ +C +G L  A      +       N H  + L+    + GM  +A   F K +
Sbjct: 332 YSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFK 391

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
            +G      ++N  +D  CK G + +A  L  +M+              G    DK    
Sbjct: 392 DSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY-------------GGLTPDKIHYT 438

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++  YC  G +  A ++  ++ ++   PDI+TYN L +GFCK G +     L   +  +
Sbjct: 439 CLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQ 498

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL P+S+TYG  I G  R     +A  +F  + + G      +Y S++           A
Sbjct: 499 GLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHA 558

Query: 586 FSLWLQYLRDISGRDDESM-KSIEEFLQKGEVE---NAIQGLLEMDFKLNDFQLAPYTIW 641
           + L+++  R  +  D  S  K I +  + G V+   N  + +LE D   +   +  Y+  
Sbjct: 559 YMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPD---VISYSKL 615

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           +   CQ+G + +A   F  +V+    V       L++G CK G L  A  +F+     G 
Sbjct: 616 ISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG- 674

Query: 702 ILRPRVCNY 710
            ++P V  Y
Sbjct: 675 -IKPDVIAY 682



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 228/509 (44%), Gaps = 46/509 (9%)

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           CS  F+  + L+        V   + L     + G VP + +++ L+  +     Y+   
Sbjct: 151 CSLSFMV-DCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVL 209

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           A Y +M   ++ PDV  + ++ R L +A KV +A+++ ++M E G+ PD   Y++ + G 
Sbjct: 210 AAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGL 269

Query: 354 CDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           CD G  D A  +  EI  R+ +P     + +++ G+C+   +D+A+KL     + G  P 
Sbjct: 270 CDCGKYDLAYVILQEI-NREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPD 328

Query: 413 VGMFNALIDGLCKAGELEKA----------------NLLFYKME-------IGKNPTLFL 449
           V  ++ LI   CK G L  A                +++ Y ++         +    FL
Sbjct: 329 VYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFL 388

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           +    G  + DK      ++ YC  G +++A K+L ++   G  PD I Y  LI+G+C  
Sbjct: 389 KFKDSGLHL-DKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLK 447

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +  A ++F+E+    + PD VTY  L +G  +     + F +  +M   G  P+   Y
Sbjct: 448 GEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTY 507

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD-ESMKS--IEEFLQKGEVENAIQGLLEM 626
              +   CR    S A  L+   + +  G D  E M S  +  +L  G  ++A    + +
Sbjct: 508 GIAIVGFCRGGNLSEAEVLF--NVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRV 565

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             + N       +  +  LC+ G V+ A N+  +++E   +    S  KLI   C+ G +
Sbjct: 566 ARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDM 625

Query: 687 D-------------LAMDVFLYT-LKNGF 701
           D             L++DV +YT L NG+
Sbjct: 626 DKAHLWFHDMVQRGLSVDVIVYTILMNGY 654



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 164/406 (40%), Gaps = 86/406 (21%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ + +  Y K G+  +A++   +MK     PD   Y  +++    K     A  V+ EM
Sbjct: 401 IYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEM 460

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR- 218
           +K N  P+IVT+++L +G  KSG       +LD M  +G+ PN  TY I I G C+    
Sbjct: 461 LKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNL 520

Query: 219 ----------------------------------ADEAYRLFLKMKDSGCSPDFVAYNAL 244
                                              D AY LF+++   G   D  + + L
Sbjct: 521 SEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKL 580

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +N  C++  V  A  + +   +   VP + SYS LI    +    D+A+ W+  M +  +
Sbjct: 581 INDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGL 640

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAM------------------------------------ 328
             DV++Y +++ G  +AG++++A                                     
Sbjct: 641 SVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEG 700

Query: 329 ---------------KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
                          KLLS M++  I PD  CY  LI G C    L +AR L  E+ ++ 
Sbjct: 701 IAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKG 760

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             P+ + +T LI G C  G +  A+ L  +M   G  P    F+ L
Sbjct: 761 LTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 20/322 (6%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL    LD +    +   S  + + I G+ + G+  +A   F  ++E        +Y++
Sbjct: 489 FDL----LDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSS 544

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++           A  ++  + +   L +  + S LIN L + G  + A  +   M +  
Sbjct: 545 MVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHD 604

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           ++P+  +Y+ +IS  CQ    D+A+  F  M   G S D + Y  L+NG+CK  R+ EA 
Sbjct: 605 VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEAC 664

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD--EAYAWYRKMF--------------EE 302
            L       G  P + +Y+ L+DG  +       E  A  R+ F              + 
Sbjct: 665 QLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDM 724

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           +IEPDV  Y V+I G  +A  + +A +L  +M ++G+ PD Y Y ALI G+C  G + +A
Sbjct: 725 QIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKA 784

Query: 363 RSLQVEIWKRDSLPNTHTFTIL 384
             L  E+  +   P+  TF++L
Sbjct: 785 EDLLQEMIDKGIEPDELTFSVL 806



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 200/492 (40%), Gaps = 64/492 (13%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I+       V+  + L S +   G+VP  + +N L+K   + G  +   +   E+    
Sbjct: 160 LIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQ 219

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS--------VGM---------- 415
             P+ +TF I+   + +   VD+A +++ +M + G  P         +G+          
Sbjct: 220 LTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAY 279

Query: 416 -----------------FNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLF------LRL 451
                            +N ++DGLCK   L++A  LL  K   G NP ++         
Sbjct: 280 VILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSY 339

Query: 452 SQGGNRV----HDKASLQTMVEQYCTA-----------GLIHKAYKILMQLAESGNLPDI 496
            + GN +    H +A +   +E  C             G+  +A    ++  +SG   D 
Sbjct: 340 CKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDK 399

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           + YN  ++ +CK GN+N A+KL  E++  GL PD + Y  LI+G       ++A ++F +
Sbjct: 400 VIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEE 459

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK---SIEEFLQK 613
           M +    P    Y  L +  C+       F L L  + D  G +  S+    +I  F + 
Sbjct: 460 MLKANIEPDIVTYNILASGFCKSGLVMEVFDL-LDRMAD-QGLEPNSLTYGIAIVGFCRG 517

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G +  A      ++ K  D     Y+  + G    G    A  +F  +     +V   SC
Sbjct: 518 GNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSC 577

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
            KLI+ LC+ G +  A +V    L++  +  P V +Y     ++ ++     A+     M
Sbjct: 578 SKLINDLCRVGNVQGASNVCKIMLEHDVV--PDVISYSKLISIYCQNGDMDKAHLWFHDM 635

Query: 734 KSVGYDLDACLY 745
              G  +D  +Y
Sbjct: 636 VQRGLSVDVIVY 647



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 18/211 (8%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VV DV  +  LIS Y + GD +KA   F  M +     DV +Y  ++N   +      A 
Sbjct: 605 VVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEAC 664

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSK----SGKTEVAI------------KMLDEMTQR 197
            ++ +M  L   P+++ +++L++G  K     G   +A             K+L  M   
Sbjct: 665 QLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDM 724

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            I P+   YT++I G C+     EA  LF +M   G +PD  AY AL+NG+C    + +A
Sbjct: 725 QIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKA 784

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
             LL+     G  P   ++S L     R+++
Sbjct: 785 EDLLQEMIDKGIEPDELTFSVLNQSSLRSRK 815



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 16/206 (7%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S +IS+  +    D       ++    +SV   V+ +L++GY K G  ++A + F +M
Sbjct: 611 SYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQM 670

Query: 125 KEFDCQPDVYIYNAVLN-------------IAFRKQLFLLAL---AVYYEMVKLNCLPNI 168
                +PDV  Y  +L+             IA  ++ FLL      +   M  +   P++
Sbjct: 671 TNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDV 730

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             +++LI+G  K+     A ++ DEM Q+G+ P+ + YT +I+G C      +A  L  +
Sbjct: 731 PCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQE 790

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRV 254
           M D G  PD + ++ L     + R++
Sbjct: 791 MIDKGIEPDELTFSVLNQSSLRSRKI 816


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/617 (27%), Positives = 273/617 (44%), Gaps = 100/617 (16%)

Query: 4   TLNE----VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           TL+E    +L I       E ALE L   +    V  V+       V  +FF WA KR  
Sbjct: 60  TLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKR-- 117

Query: 60  LRSFASNS----AVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVF-FVLISGYYKVGD 113
            R+F  +S    A+I  L +       W+T+ E+ RS  V   +D+   V + G  K+  
Sbjct: 118 -RNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKM-- 174

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFS 172
             KAL  F ++K   C+P    YN+++ +  ++        +Y EM  + +CLP+ VT+S
Sbjct: 175 VNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYS 234

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNK----------------------------- 203
            LI    K G+ + AI + DEM + G+ P                               
Sbjct: 235 ALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK 294

Query: 204 ------FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                 +TYT +I G+ +  + +EAY +F+ M   GC PD V  N L+N   K  R+ +A
Sbjct: 295 GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADA 354

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           + L    E     P + +Y+ +I  LF +K R  EA+ WY KM E  + P    Y ++I 
Sbjct: 355 IKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID 414

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  +  +V+ A+ LL +M E+G  P    Y +LI         + A  L  E+ +     
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYS 474

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +   + ++I  + + G + +A  LFN+M+K GC P V  +NAL+ G+ + G  ++A+ L 
Sbjct: 475 SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSL- 533

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
                                      L+TM E  CT                    PD+
Sbjct: 534 ---------------------------LRTMEENGCT--------------------PDL 546

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            ++N ++NGF + G   GA+++F  ++   ++PD V+Y T++  L R    E+A ++  +
Sbjct: 547 NSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKE 606

Query: 557 MPQNGCTPSPAVYKSLM 573
           M   G       Y S++
Sbjct: 607 MNSKGFEYDLITYSSIL 623



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 41/304 (13%)

Query: 99  DVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DV  +  LI+   K G    A++ F +M+   C P+V  YN V+   F  +       ++
Sbjct: 334 DVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLW 393

Query: 157 YEMVKLN-CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP-------------- 201
           YE +K N  +P+  T+S+LI+G  K+ + E A+ +L+EM ++G  P              
Sbjct: 394 YEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGK 453

Query: 202 ---------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
                                +   Y ++I  L +  R  EA  LF +MK  GC+PD  A
Sbjct: 454 AKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYA 513

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YNAL++G  ++   DEA +LLR+ E++G  P L S++ +++G  R      A   + +M 
Sbjct: 514 YNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMK 573

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
             KI+PDVV Y  ++  LS AG  ++A KL+ +M  +G   D   Y+++++    +G +D
Sbjct: 574 NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA---VGKID 630

Query: 361 QARS 364
           +  +
Sbjct: 631 EDHT 634



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 228/514 (44%), Gaps = 22/514 (4%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D   Y AL++   +   + E    ++   +   V      S ++  L +AK  ++A + +
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCD 355
            ++   K +P    Y  MI  L + G  +   +L ++M   G  +PDT  Y+ALI  F  
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG  D A SL  E+ +    P    +T ++    + G V+ A  L  +M++ GC  +V  
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +  LI G+ KAG++E+A  +F  M + G  P + L              +  ++     A
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVL--------------INNLINLLGKA 348

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNINGALKLFKELQLKGLRPDSVT 533
           G +  A K+  ++      P+++TYN++I   F      + A   +++++  G+ P S T
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFT 408

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI+G  + +R E A  +  +M + G  P PA Y SL+    + +++  A  L+ Q L
Sbjct: 409 YSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF-QEL 467

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           R+  G     + +  I+   + G +  A+    EM     +  +  Y   + G+ + G  
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMT 527

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            EA ++   + E        S   +++G  + G    A+++F   +KN  I +P V +Y 
Sbjct: 528 DEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFT-RMKNSKI-KPDVVSYN 585

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                 S+      A  L+  M S G++ D   Y
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITY 619



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 96/188 (51%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+  ++I+ L K   ++   +   ELR       + V+ V+I    K G   +A++ F +
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           MK+  C PDVY YNA+++   R  +   A ++   M +  C P++ + ++++NG +++G 
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + AI+M   M    I P+  +Y  V+  L +    +EA +L  +M   G   D + Y++
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSS 621

Query: 244 LLNGFCKL 251
           +L    K+
Sbjct: 622 ILEAVGKI 629



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 188/455 (41%), Gaps = 66/455 (14%)

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEI--------W---KRDSLPNTHTFTILICGMC 389
           PD      ++K   D  L+ +   + VEI        W   +R+   ++ T+  LI  + 
Sbjct: 76  PDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLD 135

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLF 448
             GM+ +  K   +M ++ C       + ++  L KA  + KA  +FY+++  K  PT  
Sbjct: 136 EAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT-- 193

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN-LPDIITYNSLINGFC 507
                         +  +M+      G   K +++  ++   G+ LPD +TY++LI  F 
Sbjct: 194 ------------SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFG 241

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K+G  + A+ LF E++  GL P +  Y T++    ++ R E A  +  +M + GC  +  
Sbjct: 242 KLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY 301

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEM 626
            Y  L+    +  K   A+S+++  L++    D   + ++   L K G + +AI+   EM
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361

Query: 627 DF--------------------------------KLNDFQLAP----YTIWLIGLCQDGQ 650
           +                                 K+ +  + P    Y+I + G C+  +
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V++AL +   + E      P +   LI+ L K    + A ++F    +N      RV   
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAV 481

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +++ L   K  +   A  L   MK +G + D   Y
Sbjct: 482 MIKHL--GKCGRLSEAVDLFNEMKKLGCNPDVYAY 514


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 261/580 (45%), Gaps = 82/580 (14%)

Query: 156 YYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           Y+ MV ++   PN+VTFS LI+   K G  + A  + D M   G+ P+   Y+I+I GL 
Sbjct: 294 YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLF 353

Query: 215 QINRADEAYRLFL-----------------------------------KMKDSGCSPDFV 239
           +  R ++  RL L                                   +M + G SP+ V
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           + + L+ GFC+  R+ EA  L     K GF P + +YS LI G  ++    + +  Y  M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            +++ EPD ++Y V+I GL + G V DA++       RG+ P+ +  N L+  FC L  +
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             A  +   +   +   +T T+TILI G  + G VD+A  LF +M K    P V  +  L
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           IDGLCK  +      +F  M   KN               D A    ++  +   G +  
Sbjct: 594 IDGLCKLKKSSAGLCIFDFM--CKNAV-----------APDIAIYNVLINMHSREGHLEA 640

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  + + + E G  PD+ T+N++I  +C    ++ A++LF ++  + LRP+++T+  LI+
Sbjct: 641 ALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILID 700

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
              R  R +DA  +F +M + G  P P    +L+T+SC    +  + S+           
Sbjct: 701 AFCREGRMDDAMLMFSKMLEEG--PEP----NLVTYSCLIHGYFKSQSMM---------- 744

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            +  +K   E L+     N +                 Y+I + GLC+ G +KEA   F 
Sbjct: 745 -ESGLKLYNEMLENNIAPNIVS----------------YSILIDGLCKRGLMKEASCAFR 787

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             ++   +    +   LI G CK G L  AM ++   L N
Sbjct: 788 CALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLN 827



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 220/457 (48%), Gaps = 16/457 (3%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           +Y + L+E  S NV   S    +LI G+ + G   +A   F ++ +   +P +  Y+A++
Sbjct: 399 IYKRMLNEGISPNVVSCS----ILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALI 454

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               +         +Y +M+K  C P+ + +S+LINGL K G    A++   +   RG+ 
Sbjct: 455 AGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLS 514

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           PN FT   ++   C++     A +++  M       D V Y  L+ G  +  RVDEAL L
Sbjct: 515 PNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALML 574

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                K  F P + +Y  LIDGL + K+       +  M +  + PD+ +Y V+I   S 
Sbjct: 575 FFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSR 634

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G ++ A+ L   + ERG  PD + +N +I  +C+   LD A  L  ++      PN  T
Sbjct: 635 EGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAIT 694

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           FTILI   CR G +DDA  +F+KM + G  P++  ++ LI G  K+  + ++ L  Y  E
Sbjct: 695 FTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYN-E 753

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           + +N           N   +  S   +++  C  GL+ +A        +   LPD+I Y 
Sbjct: 754 MLEN-----------NIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYT 802

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            LI G+CKVG +  A+ L+  + L  L PD     TL
Sbjct: 803 ILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 244/549 (44%), Gaps = 49/549 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISG------------------- 107
           S +I    K    D  +   D +    V+    V+ +LI G                   
Sbjct: 311 STLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALD 370

Query: 108 ----------------YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
                           Y K+GD  + ++ + +M      P+V   + ++    +    L 
Sbjct: 371 KGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILE 430

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  ++ +++KL   P+I+T+S LI G  KSG       + ++M ++   P+   Y+++I+
Sbjct: 431 ACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLIN 490

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+     +A R F +  + G SP+    N LL+ FC+L+ +  A+ +           
Sbjct: 491 GLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKA 550

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ LI G  +  R DEA   + +M ++  +PDV+ Y  +I GL +  K    + + 
Sbjct: 551 DTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIF 610

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +  + PD   YN LI      G L+ A  L V + +R   P+  TF  +IC  C  
Sbjct: 611 DFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNF 670

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
             +DDA +LF KM      P+   F  LID  C+ G ++ A L+F KM E G  P L   
Sbjct: 671 KRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTY 730

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                  +H     Q+M+E    +GL     K+  ++ E+   P+I++Y+ LI+G CK G
Sbjct: 731 ----SCLIHGYFKSQSMME----SGL-----KLYNEMLENNIAPNIVSYSILIDGLCKRG 777

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A   F+    K L PD + Y  LI G  +V R  +A  ++  M  N  TP   + +
Sbjct: 778 LMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLER 837

Query: 571 SLMTWSCRR 579
           +L  +  ++
Sbjct: 838 TLEEYQLKK 846



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 166/417 (39%), Gaps = 62/417 (14%)

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           +A   GFCDL                DS  ++  +  LI   CR GM D +  +F  +  
Sbjct: 152 DAFRDGFCDL----------------DSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCV 195

Query: 407 AGCFPSVG----MFNALIDGLC------KAGELEKA-------------NLLFYKMEIGK 443
            G F S      +  +LID  C      K GEL  A             N    K E+  
Sbjct: 196 KGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEM 255

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                  L QGG  + D  +   +++       I  A      +   G  P+++T+++LI
Sbjct: 256 GLRFHKALVQGGFGL-DIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLI 314

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           + +CK GN++ A  LF  +   G+ PD + Y  LI+GL +  R ED  R+       G  
Sbjct: 315 DAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIK 374

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQKGEVENAIQG 622
                + S M    +         ++ + L + IS         I+ F Q G +  A  G
Sbjct: 375 LDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEAC-G 433

Query: 623 LLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHG 679
           L     KL  +  +  Y+  + G C+ G +++   ++  ++  K    P + V   LI+G
Sbjct: 434 LFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMI--KKRCEPDTIVYSVLING 491

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           LCK+G +  A+  F   +  G  L P V  + L +LL S            CR+K +
Sbjct: 492 LCKQGLVGDALRFFFQAVNRG--LSPNV--FTLNTLLDS-----------FCRLKCI 533


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 267/587 (45%), Gaps = 57/587 (9%)

Query: 4   TLNE----VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           TL+E    +L I    +  E A+E L   +    V  V+      +   +FF WA KR+ 
Sbjct: 60  TLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQH 119

Query: 60  LRSFASNSAVISMLLKPNGF-DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            +  ++    +   L+ +G  D  W+T+ ++     SV    +  ++    K     KAL
Sbjct: 120 FQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKAL 179

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLI-- 175
             F ++K   C P   +YN ++ +   +        +Y E+  + NC P+ +T+S LI  
Sbjct: 180 SVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISA 239

Query: 176 -------------------NGLS--------------KSGKTEVAIKMLDEMTQRGILPN 202
                              NGL               K  K E A+++++EM  +G  P 
Sbjct: 240 FGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPT 299

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            FTYT +I GL ++ R D+AY LF  M   GC PD V  N L+N   +  R+++AL L  
Sbjct: 300 VFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFG 359

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
             +     P + +Y+ +I  +F +K    EA  W+ KM    I P    Y ++I G  + 
Sbjct: 360 KMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT 419

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            +V+ A+ LL +M E+G  P    Y +LI         + A  L  E+ +     +   +
Sbjct: 420 NRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVY 479

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
            ++I      G + DA  LF +M+K GC P V  +NAL+ G+ +AG +++A+ L   M E
Sbjct: 480 AVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE 539

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P              D  S   ++      G   +A ++  ++ ES  +PD ++YN
Sbjct: 540 NGCTP--------------DIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYN 585

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           ++++   + G    A KL +E++LKG   DS+TY +++  + +VD +
Sbjct: 586 TILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 181/415 (43%), Gaps = 34/415 (8%)

Query: 342 DTYCYNALIKGFCDLGLLDQA-RSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQK 399
           D+  Y ALI+   + GL+D+  R++Q  I    S+ P   +  + I G  +  MV+ A  
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAK--MVNKALS 180

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F +++   C P+  ++N LI  L   G  EK + L+ +            +   GN   
Sbjct: 181 VFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNE------------ICSEGNCSP 228

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++  +        A+++  ++ E+G  P    Y +++  + K+  +  AL+L 
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLV 288

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +E++ KG  P   TY  LI GL +V R +DA+ +F  M ++GC P   +  +L+    R 
Sbjct: 289 EEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRA 348

Query: 580 RKFSLAFSLW-----LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            +   A  L+     LQ   ++   +   +K+I  F  K     A     +M  K N   
Sbjct: 349 GRLEDALKLFGKMDSLQCAPNVVTYNT-VIKAI--FESKAPASEAALWFEKM--KANG-- 401

Query: 635 LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           +AP    Y I + G C+  +V++AL +   + E      P +   LI  L +    + A 
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++F    +N      RV   +++   F    +   A  L C MK +G   D   Y
Sbjct: 462 ELFQELKENCGRSSARVYAVMIKH--FGNCGRLSDAVDLFCEMKKLGCSPDVYTY 514


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 216/407 (53%), Gaps = 16/407 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++++ + L++GL K  +      +  EM +R I  N  ++ IV++GLC++ + + A  + 
Sbjct: 119 SLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVI 178

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDE---ALALLRSFEKDGFVPRLGSYSCLIDGL 283
             MK  G SP+ + YN L++G+CK+ R+ +   A A+L+     G  P   +Y+ LIDG 
Sbjct: 179 EDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGF 238

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + +    A   + +M  + + P+VV Y ++I GL   GKV +A+ L   M    + P+ 
Sbjct: 239 CKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNV 298

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             +N LI GFC    +++A +L  ++ K+   PN  T+T LI   C++G ++DA  L+N 
Sbjct: 299 VTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNM 358

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           M   G FP V  +N LI GLC+ G+++ A  L        N  +  +LS       D  +
Sbjct: 359 MIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM-------NEMVSKKLSA------DVVT 405

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +++  C  G   KA K+L ++ E G  P  +TYN+L++G+C+ GN+  AL +   ++
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            KG + + VT+  LI G     R EDA  +  +M + G  P+   Y+
Sbjct: 466 RKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 184/353 (52%), Gaps = 5/353 (1%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN---IAFRK 146
           R   ++V+S  F ++++G  KVG   +A +    MK +   P+V  YN +++      R 
Sbjct: 149 RKIELNVIS--FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI 206

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A A+  EMV     PN VT+++LI+G  K      A+++  EM ++G+ PN  TY
Sbjct: 207 GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTY 266

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            I+I+GLC   + DEA  L  +M  S   P+ V +N L+NGFCK + V+EA+ L    EK
Sbjct: 267 NILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK 326

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P   +Y+ LID   +  R ++A+A Y  M +  I P+V  Y  +I GL   G VK 
Sbjct: 327 QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKA 386

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A  L+++M  + +  D   YN LI   C  G   +A  L  E++++   P+  T+  L+ 
Sbjct: 387 ARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMD 446

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G CR G +  A  +  +ME+ G   +V   N LI G C  G LE AN L  +M
Sbjct: 447 GYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 177/337 (52%), Gaps = 16/337 (4%)

Query: 166 PNIVTFSLLING---LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           PN++T++ LI+G   + + GK   A  +L EM  +GI PN+ TY I+I G C+      A
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            R+F +M+  G  P+ V YN L+NG C   +VDEA+AL          P + +++ LI+G
Sbjct: 248 MRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLING 307

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + K  +EA   +  M ++ ++P+ + Y  +I    + G+++DA  L + M +RGI P+
Sbjct: 308 FCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPE 367

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C  G +  ARSL  E+  +    +  T+ ILI  +C+ G    A KL +
Sbjct: 368 VSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLD 427

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M + G  PS   +N L+DG C+ G L  A ++  +ME         R  +  N V    
Sbjct: 428 EMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME---------RKGKQANVV---- 474

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +   +++ +C  G +  A  +L ++ E G +P+  TY
Sbjct: 475 THNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 193/375 (51%), Gaps = 3/375 (0%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           KRK   +  S + V++ L K    +     +++++   VS     +  LI GY K+G   
Sbjct: 148 KRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIG 207

Query: 116 KALESFGKMKEFDCQ---PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           K  ++   +KE   +   P+   YN +++   + +    A+ V+ EM +    PN+VT++
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +LINGL   GK + A+ + D+M    + PN  T+ ++I+G C+    +EA  LF  M+  
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  P+ + Y  L++ +CK  R+++A AL       G  P + +Y+CLI GL R      A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
            +   +M  +K+  DVV Y ++I  L + G+ + A+KLL +M E+G+ P    YN L+ G
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           +C  G L  A  ++  + ++    N  T  +LI G C  G ++DA  L N+M + G  P+
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507

Query: 413 VGMFNALIDGLCKAG 427
              +  + + + + G
Sbjct: 508 RTTYEIIKEEMMEKG 522



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 210/455 (46%), Gaps = 58/455 (12%)

Query: 258 LALLRSFE------KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           L +LR FE        GF   L S + L+ GL +     +    YR+M + KIE +V+ +
Sbjct: 99  LKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISF 158

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ---ARSLQVE 368
            +++ GL + GK+  A  ++ DM+  G+ P+   YN LI G+C +G + +   A ++  E
Sbjct: 159 NIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKE 218

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +   PN  T+ ILI G C++  V  A ++F +M++ G  P+V  +N LI+GL     
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGL----- 273

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
                                                      C+ G + +A  +  Q+ 
Sbjct: 274 -------------------------------------------CSDGKVDEAVALRDQMV 290

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            S   P+++T+N LINGFCK   +N A+ LF +++ +G+ P+++TY TLI+   +  R E
Sbjct: 291 SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-I 607
           DAF ++  M   G  P  + Y  L+   CR+     A SL  + +      D  +    I
Sbjct: 351 DAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +   +KGE   A++ L EM  K  +     Y   + G C++G ++ AL + + +      
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
               +   LI G C +G L+ A  +    L+ G +
Sbjct: 471 ANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 151/299 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+ K  +   A+  FG+M+    +P+V  YN ++N          A+A+  +M
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  +  PN+VT ++LING  K+     AI + ++M ++G+ PN  TYT +I   C+  R 
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRM 349

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A+ L+  M D G  P+   YN L+ G C+   V  A +L+           + +Y+ L
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L +     +A     +MFE+ + P  V Y  ++ G    G ++ A+ + + M  +G 
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             +   +N LIKGFC  G L+ A  L  E+ +R  +PN  T+ I+   M   G V D +
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPDIE 528



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 4/209 (1%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
           ++ T+NE + + + +   +  ++P    ++ TT+     K    +  F  +     R   
Sbjct: 310 KNKTVNEAINLFNDME--KQGVDP--NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 61  RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALES 120
              ++ + +I+ L +          ++E+ S  +S     + +LI    K G+  KA++ 
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
             +M E    P    YN +++   R+     AL V   M +     N+VT ++LI G   
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
            G+ E A  +L+EM +RG++PN+ TY I+
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYEII 514


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 243/505 (48%), Gaps = 19/505 (3%)

Query: 90  RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFD--CQPDVYIYNAVLNIAFR 145
           R+  +  V DVF   +L+      G   +A +    M E    C PDV  Y  V++  F+
Sbjct: 176 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFK 235

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  ++ EMV+    P++VT+S +++ L K+     A   L +M  +G+LP+ +T
Sbjct: 236 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT 295

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I G     +  EA R+F +M+     PD V  N L+   CK  ++ EA  +  +  
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P + SY  +++G        +    +  M  + I PD+  + V+I+  +  G + 
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLD 415

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            AM + ++MR+ G+ PD   Y  +I   C +G +D A     ++  +   P+ + +  LI
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 475

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-YKMEIGKN 444
            G C +G +  A++L  ++   G    +  F+++I+ LCK G +  A  +F   + +G++
Sbjct: 476 QGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH 535

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D      +++ YC  G + KA ++   +  +G  P+++ Y +L+N
Sbjct: 536 P--------------DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G+CK+G I+  L LF+E+  KG++P ++ Y  +I+GL    R   A   F +M ++G   
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAI 641

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLW 589
           +   Y  ++    + R F  A  L+
Sbjct: 642 NKCTYNIVLRGFFKNRCFDEAIFLF 666



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 224/473 (47%), Gaps = 16/473 (3%)

Query: 104 LISGYYKVGDCEKALESF-GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           L+ G+ +    ++AL+    +  E  C PDV+ Y+ +L     +     A  +   M + 
Sbjct: 156 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 215

Query: 163 N--CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P++V ++ +I+   K G    A  +  EM QRGI P+  TY+ V+  LC+     
Sbjct: 216 GAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMG 275

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A     +M + G  PD   YN L+ G+    +  EA+ + +   +   +P + + + L+
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L +  +  EA   +  M  +   PDV  Y +M+ G +  G + D   L   M   GI 
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD Y ++ LIK + + G+LD+A  +  E+      P+  T+T +I  +CR G +DDA + 
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           FN+M   G  P    ++ LI G C  G L KA              L L +   G R+ D
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK------------ELILEIMNNGMRL-D 502

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                +++   C  G I  A  I       G  PD + Y+ L++G+C VG +  AL++F 
Sbjct: 503 IVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFD 562

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +   G+ P+ V YGTL+NG  ++ R ++   +F +M Q G  PS  +Y  ++
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 615



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 248/524 (47%), Gaps = 34/524 (6%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S  S  + +L+    +    E AL  FG++     + D+ I N +L      +    AL
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 154 AVY-YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL--PNKFTYTIVI 210
            +  +   +L C+P++ ++S+L+  L   GK+  A  +L  M + G +  P+   YT VI
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
               +    ++A  LF +M   G  PD V Y+++++  CK R + +A A LR     G +
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +Y+ LI G     ++ EA   +++M    I PDVV   +++  L + GK+K+A  +
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              M  +G  PD + Y  ++ G+   G L     L   +      P+ +TF++LI     
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            GM+D A  +FN+M   G  P V  +  +I  LC+ G+++ A   F +M           
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM----------- 459

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           + QG     DK +   +++ +CT G + KA ++++++  +G   DI+ ++S+IN  CK+G
Sbjct: 460 IDQG--VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLG 517

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I  A  +F      G  PD+V Y  L++G   V + E A R+F  M   G  P+  VY 
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
           +L+   C+                   GR DE +    E LQKG
Sbjct: 578 TLVNGYCK------------------IGRIDEGLSLFREMLQKG 603



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 239/486 (49%), Gaps = 22/486 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I  ++K GD  KA + F +M +    PD+  Y++V++   + +    A A   +MV
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
               LP+  T++ LI G S +G+ + A+++  EM +  ILP+  T  +++  LC+  +  
Sbjct: 286 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F  M   G +PD  +Y  +LNG+     + +   L      DG  P + ++S LI
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                    D+A   + +M +  ++PDVV Y  +I  L   GK+ DAM+  + M ++G+ 
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD Y Y+ LI+GFC  G L +A+ L +EI       +   F+ +I  +C+ G + DAQ +
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNI 525

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLSQGG-- 455
           F+     G  P   +++ L+DG C  G++EKA  +F  M    I  N  ++  L  G   
Sbjct: 526 FDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCK 585

Query: 456 -NRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
             R+ +  SL                  +++    AG    A     ++ ESG   +  T
Sbjct: 586 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCT 645

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN ++ GF K    + A+ LFKEL+   ++ D +T  T+I G+ +  R E+A  +F  + 
Sbjct: 646 YNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 705

Query: 559 QNGCTP 564
           ++G  P
Sbjct: 706 RSGLVP 711



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 255/557 (45%), Gaps = 27/557 (4%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           R + P   TY I++    + +R + A   F ++  +G   D +  N LL GFC+ +R DE
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 257 AL-ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGV 313
           AL  LL    + G VP + SYS L+  L    +  +A    R M E      PDVV Y  
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I    + G V  A  L  +M +RGI PD   Y++++   C    + +A +   ++  + 
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            LP+  T+  LI G    G   +A ++F +M +    P V   N L+  LCK G++++A 
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 434 LLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G+NP +F              S + M+  Y T G +     +   +   G 
Sbjct: 349 DVFDTMAMKGQNPDVF--------------SYKIMLNGYATKGCLVDMTDLFDLMLGDGI 394

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDI T++ LI  +   G ++ A+ +F E++  G++PD VTY T+I  L R+ + +DA  
Sbjct: 395 APDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAME 454

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM   G  P    Y  L+   C       A  L L+ + +    D     SI   L 
Sbjct: 455 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC 514

Query: 613 K-GEVENAIQGLLEMDFKLNDFQLA-PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           K G + +A Q + ++   +     A  Y++ + G C  G++++AL +F  +V   A + P
Sbjct: 515 KLGRIMDA-QNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS--AGIEP 571

Query: 671 PSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              V   L++G CK G +D  + +F   L+ G      + N ++  L  +   + V A  
Sbjct: 572 NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVA--GRTVPAKV 629

Query: 729 LLCRMKSVGYDLDACLY 745
               M   G  ++ C Y
Sbjct: 630 KFHEMTESGIAINKCTY 646



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 194/406 (47%), Gaps = 15/406 (3%)

Query: 95  SVVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           S++ DV  +  L+    K G  ++A + F  M      PDV+ Y  +LN    K   +  
Sbjct: 323 SILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDM 382

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++  M+     P+I TFS+LI   +  G  + A+ + +EM   G+ P+  TYT VI+ 
Sbjct: 383 TDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAA 442

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+I + D+A   F +M D G +PD  AY+ L+ GFC    + +A  L+     +G    
Sbjct: 443 LCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLD 502

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           +  +S +I+ L +  R  +A   +         PD V+Y +++ G    GK++ A+++  
Sbjct: 503 IVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFD 562

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M   GI P+   Y  L+ G+C +G +D+  SL  E+ ++   P+T  + I+I G+   G
Sbjct: 563 AMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
               A+  F++M ++G   +   +N ++ G  K    ++A  LF ++             
Sbjct: 623 RTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL------------- 669

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           +  N   D  +L TM+        + +A  +   ++ SG +P ++T
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 183/386 (47%), Gaps = 21/386 (5%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           ++    ++ MK +NP V F + I       L  +A+   ++ M       DL+   L + 
Sbjct: 347 ARDVFDTMAMKGQNPDV-FSYKIM------LNGYATKGCLVDMT------DLFDLMLGD- 392

Query: 90  RSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
                 +  D+  F VLI  Y   G  +KA+  F +M++   +PDV  Y  V+    R  
Sbjct: 393 -----GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A+  + +M+     P+   +  LI G    G    A +++ E+   G+  +   ++
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFS 507

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+ LC++ R  +A  +F    + G  PD V Y+ L++G+C + ++++AL +  +    
Sbjct: 508 SIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 567

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P +  Y  L++G  +  R DE  + +R+M ++ I+P  +LY ++I GL  AG+   A
Sbjct: 568 GIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPA 627

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                +M E GI  +   YN +++GF      D+A  L  E+   +   +  T   +I G
Sbjct: 628 KVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSV 413
           M +   V++A+ LF  + ++G  P V
Sbjct: 688 MFQTRRVEEAKDLFASISRSGLVPCV 713


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 310/686 (45%), Gaps = 71/686 (10%)

Query: 37  VIMKTKNPQVGFRFF-IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVS 95
           V+ K  NP+V  +    ++    +LRS   +S   +  LK N   ++ Q +D   SG   
Sbjct: 19  VVRKLLNPRVYSKLVNAFSETETKLRSLCEDS---NPQLK-NAVSVFQQAVD---SG--- 68

Query: 96  VVSDVFFV---LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN--IAFRKQLFL 150
             S + F    L++   +  + E A   + KM E D   +    + +L   +  RK  F 
Sbjct: 69  --SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGF- 125

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  V   M+K     N+   ++L+ GL ++ +   A+ +L EM +  ++P+ F+Y  VI
Sbjct: 126 -AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            G C+    ++A  L  +MK SGCS   V +  L++ FCK  ++DEA+  L+  +  G  
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             L  Y+ LI G       D   A + ++ E    P  + Y  +IRG  + G++K+A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              M ERG+ P+ Y Y  LI G C +G   +A  L   + ++D  PN  T+ I+I  +C+
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           +G+V DA ++   M+K    P    +N L+ GLC  G+L++A+ L Y M           
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM----------- 413

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           L        D  S   ++   C    +H+A  I   L E     D +T N L+N   K G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           ++N A++L+K++    +  +S TY  +I+G  +      A  +  +M  +   PS   Y 
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L++  C+      A+ L+ +  RD                                   
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRD----------------------------------- 558

Query: 631 NDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKRGYLD 687
           N+F  +  + I + G  + G +K A ++   +   +A ++P   +  KLI+   K GYLD
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM--SRAGLSPDLFTYSKLINRFLKLGYLD 616

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLR 713
            A+  F   + +GF     +C+ +L+
Sbjct: 617 EAISFFDKMVDSGFEPDAHICDSVLK 642



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/578 (26%), Positives = 262/578 (45%), Gaps = 56/578 (9%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVIS--MLLKPNGFDLYWQTLDELRSGNVS 95
           +++++N ++ F F+    +     +F S S ++   + ++  GF      L   R    +
Sbjct: 82  LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141

Query: 96  VVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
           V +    +L+ G  +  +C KA+    +M+     PDV+ YN V+      +    AL +
Sbjct: 142 VYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
             EM    C  ++VT+ +LI+   K+GK + A+  L EM   G+  +   YT +I G C 
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               D    LF ++ + G SP  + YN L+ GFCKL ++ EA  +     + G  P + +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LIDGL    +  EA      M E+  EP+ V Y ++I  L + G V DA++++  M+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRN-- 391
           +R   PD   YN L+ G C  G LD+A  L   + K  S   P+  ++  LI G+C+   
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439

Query: 392 ---------------------------------GMVDDAQKLFNKMEKAGCFPSVGMFNA 418
                                            G V+ A +L+ ++  +    +   + A
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499

Query: 419 LIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +IDG CK G L  A  L  KM + +  P++F                  ++   C  G +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVF--------------DYNCLLSSLCKEGSL 545

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A+++  ++    N PD++++N +I+G  K G+I  A  L   +   GL PD  TY  L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           IN   ++   ++A   F +M  +G  P   +  S++ +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 212/443 (47%), Gaps = 17/443 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G+   G+ ++    F ++ E    P    YN ++    +      A  ++  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    PN+ T++ LI+GL   GKT+ A+++L+ M ++   PN  TY I+I+ LC+    
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYS 277
            +A  +   MK     PD + YN LL G C    +DEA  LL    KD     P + SY+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI GL +  R  +A   Y  + E+    D V   +++    +AG V  AM+L   + + 
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            IV ++  Y A+I GFC  G+L+ A+ L  ++   +  P+   +  L+  +C+ G +D A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGN 456
            +LF +M++   FP V  FN +IDG  KAG+++ A  L   M   G +P LF        
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF-------- 600

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +   ++ ++   G + +A     ++ +SG  PD    +S++      G  +   
Sbjct: 601 ------TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 517 KLFKELQLKGLRPDSVTYGTLIN 539
           +L K+L  K +  D     T+++
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMD 677



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PDV  YNA+++   ++     AL +Y  +V+     + VT ++L+N   K+G    A++
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +  +++   I+ N  TYT +I G C+    + A  L  KM+ S   P    YN LL+  C
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K   +D+A  L    ++D   P + S++ +IDG  +A     A +    M    + PD+ 
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I    + G + +A+     M + G  PD +  ++++K     G  D+   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 370 WKRDSLPNTHTFTILICGMCRNGM-VDDAQKLF 401
             +D + +      ++  MC +   +D A++L 
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 212/424 (50%), Gaps = 21/424 (4%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+  T + LI  LS SG+T  A ++L         P+   Y  +++G C   + D A R 
Sbjct: 96  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRW 150

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
                +     D    + L+ G C   R   ALA+L    +   VP + +Y+ L++   +
Sbjct: 151 ---CAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
              Y +A     +M ++   PD+V Y V++ G+ + G+V DA++ L ++   G  P+T  
Sbjct: 208 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 267

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN ++KG C     + A  L  E+ ++   PN  TF +LI  +CR G+V+ A ++  ++ 
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           K GC P+   +N L+   CK  +++KA               FL L        D  S  
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKA-------------MAFLDLMVSRGCYPDIVSYN 374

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++   C +G +  A ++L QL + G  P +I+YN++I+G  K G    AL+L  E+  K
Sbjct: 375 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 434

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL+PD +TY T+  GL R DR EDA R FG++   G  P+  +Y +++   C+RR+   A
Sbjct: 435 GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSA 494

Query: 586 FSLW 589
             L+
Sbjct: 495 IDLF 498



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 240/510 (47%), Gaps = 84/510 (16%)

Query: 116 KALESFGKMKEF-----DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV- 169
           K L + G+  E       C PDV  YNA++             A   +  +  C    V 
Sbjct: 106 KKLSASGRTAEARRVLAACGPDVMAYNAMMAG--------YCGAGQVDAARRWCAERAVE 157

Query: 170 ----TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
               T   LI GL   G+T  A+ +LDEM +R  +P+  TYTI++   C+ +   +A +L
Sbjct: 158 RDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 217

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M+D GC+PD V YN ++NG C+  RVD+A+  L++    G  P   SY+ ++ GL  
Sbjct: 218 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 277

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R+++A     +M ++   P+VV + ++I  L   G V+ A+++L  + + G  P++  
Sbjct: 278 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLS 337

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+  FC    +D+A +    +  R   P+  ++  L+  +CR+G VD A +L ++++
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             GC P +  +N +IDGL KAG+ ++A                                 
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEA--------------------------------- 424

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
                           ++L ++   G  PDIITY+++  G C+   I  A++ F ++Q  
Sbjct: 425 ---------------LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+RP++V Y  +I GL +      A  +F  M  NGC P+ + Y  L+          LA
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE--------GLA 521

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +   ++  RD+          ++E   +GE
Sbjct: 522 YEGLIKEARDL----------LDELCSRGE 541



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 16/416 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI G    G    AL    +M    C PDV  Y  +L    ++  +  A+ +  EM   
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK 224

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            C P+IVT+++++NG+ + G+ + AI+ L  +   G  PN  +Y IV+ GLC   R ++A
Sbjct: 225 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 284

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   GC P+ V +N L++  C+   V+ AL +L    K G  P   SY+ L+  
Sbjct: 285 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA 344

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             + K+ D+A A+   M      PD+V Y  ++  L  +G+V  A++LL  ++++G  P 
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN +I G    G   +A  L  E+  +   P+  T++ +  G+CR   ++DA + F 
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 464

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           K++  G  P+  ++NA+I GLCK  E   A  LF  M              G   + +++
Sbjct: 465 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM-------------IGNGCMPNES 511

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGN--LPDIITYN-SLINGFCKVGNINGA 515
           +   ++E     GLI +A  +L +L   G   L D+   + + +  F    N NG 
Sbjct: 512 TYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTTFLPCSNANGG 567



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 182/353 (51%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           +R+ +    + + ++    K +G+    + LDE+R    +     + V+++G  + G  +
Sbjct: 188 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 247

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A+E    +  + C+P+   YN VL      + +  A  +  EM +  C PN+VTF++LI
Sbjct: 248 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           + L + G  E A+++L+++ + G  PN  +Y  ++   C+  + D+A      M   GC 
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V+YN LL   C+   VD A+ LL   +  G  P L SY+ +IDGL +A +  EA   
Sbjct: 368 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 427

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + ++PD++ Y  +  GL    +++DA++    +++ GI P+T  YNA+I G C 
Sbjct: 428 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 487

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
                 A  L   +     +PN  T+TILI G+   G++ +A+ L +++   G
Sbjct: 488 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 220/473 (46%), Gaps = 42/473 (8%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +DEAL L+ S  +    P  G+ + LI  L  + R  EA    R++      PDV+ Y  
Sbjct: 83  LDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEA----RRVLA-ACGPDVMAYNA 133

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+ G   AG+V  A +  +   ER +  D Y  + LI+G C  G    A ++  E+ +R 
Sbjct: 134 MMAGYCGAGQVDAARRWCA---ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR 190

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA- 432
            +P+  T+TIL+   C+      A KL ++M   GC P +  +N +++G+C+ G ++ A 
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250

Query: 433 ----NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
               NL  Y  E                   +  S   +++  CTA     A +++ ++ 
Sbjct: 251 EFLKNLPSYGCE------------------PNTVSYNIVLKGLCTAERWEDAEELMGEMG 292

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G  P+++T+N LI+  C+ G +  AL++ +++   G  P+S++Y  L++   +  + +
Sbjct: 293 QKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMD 352

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
            A      M   GC P    Y +L+T  CR  +  +A  L  Q           S  ++ 
Sbjct: 353 KAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI 412

Query: 609 EFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + L K G+ + A++ L EM  K     +  Y+    GLC++ ++++A+  F    + + +
Sbjct: 413 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG---KVQDM 469

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
              P+ V    +I GLCKR     A+D+F Y + NG +        L+  L +
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 522



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 9/239 (3%)

Query: 4   TLNEVLTILDTVTPIEPALEPL--LP-------FLSKTTVTSVIMKTKNPQVGFRFFIWA 54
           T N +++ L     +EPALE L  +P        LS   +     K K       F    
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
             R       S + +++ L +    D+  + L +L+    + V   +  +I G  K G  
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++ALE   +M     QPD+  Y+ +     R+     A+  + ++  +   PN V ++ +
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           I GL K  +T  AI +   M   G +PN+ TYTI+I GL       EA  L  ++   G
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/619 (26%), Positives = 284/619 (45%), Gaps = 62/619 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQL-----FLLAL 153
           +F  L+  Y K  D   A +   KM++ +C+P   +YN ++ +I    +L     F LA 
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+    + N V        L   GK E A K++ EM   G +P+  TY+ VI  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  +R + A+ LF +MK +G  PD   Y  L++ F K   + +A   L    +DG  P +
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +AK+   A   +  M  +   P+V+ Y  +I G  ++G ++ A ++ + 
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR    +PD                +D    ++  + ++   PN  T+  L+ G+C+   
Sbjct: 620 MRGDADIPD----------------VDMYFKIKNNVAEK---PNVVTYGALVDGLCKAHK 660

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V DA+ L   M   GC P+  +++ALIDG CKA +L++A  +F+KM E G NP ++   S
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSS 720

Query: 453 QGGNRVHDK------ASLQTMVEQYCTAGLI---------------HKAYKILMQLAESG 491
                  DK        L  M+E  C   ++                +AYK+++ + E G
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+++TY ++I+GF K G ++  L+LF+E+  KG  P+ VTY  LIN        ++A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
            +  +M Q       + Y  ++     +R+F L+  L  +  ++ S       K  I+ F
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEG--YKREFILSLGLLEEVEKNGSAPTILLYKVLIDNF 898

Query: 611 LQKGEVENA-------IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           ++ G +E A       I   + M  K N      YT  +       ++  A  +F  ++ 
Sbjct: 899 VKAGRLEVALELHKEVISASMSMTAKKN-----LYTSLIYSFSYASKIDHAFELFYDMIR 953

Query: 664 CKAIVTPPSCVKLIHGLCK 682
              I    + V L+ GL +
Sbjct: 954 DGVIPDLGTFVHLLMGLIR 972



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 187/787 (23%), Positives = 329/787 (41%), Gaps = 100/787 (12%)

Query: 6   NEVLTILDTVTPIEPA--------LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR 57
           NE   ILD +   +          L      L+   V  ++   K+P++  +FF+WA ++
Sbjct: 105 NEAFLILDAIRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQ 164

Query: 58  KRLRSFASNSAVISMLLKPNGFD-LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
                  +    +  + +   +D +  + L E+R  +  V+  +  VLI    + G    
Sbjct: 165 IGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNV 224

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           ALE  G++K+F  +P    YNA++ +  R      A  V+ EM +L    +  T      
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQ 284

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L K GK   A+ +++   +   +PN   Y  +ISGLC+ +  +EA     +M+ + C P
Sbjct: 285 ALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   Y  LL G    +++     +L     +G  P    ++ L+    ++  +  AY   
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 297 RKMFEEKIEPDVVLYGVMI----------------------------------------- 315
           +KM + + +P  V+Y ++I                                         
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDT-------------------------------- 343
           R L   GK + A K++ +M   G VPDT                                
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVV 521

Query: 344 ---YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
              Y Y  LI  F   G++ QA +   E+ +    P   T+T LI    +   V  A +L
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M   GCFP+V  + ALIDG CK+G +EKA  ++ +M    +        +  N V +
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641

Query: 461 KASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           K ++ T   +V+  C A  +  A  +L  +   G  P+ I Y++LI+GFCK   ++ A +
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +F ++  +G  P+  TY +LI+ L +  R +   ++  +M +N C P+  +Y  ++    
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           +  K   A+ L L         +  +  + I+ F + G+V+  ++   EM  K       
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVF 693
            YT+ +   C  G + EA   +++L E K    P    S  K+I G  KR ++ L++ + 
Sbjct: 822 TYTVLINHCCATGHLDEA---YALLEEMKQTYWPKHVSSYCKVIEGY-KREFI-LSLGLL 876

Query: 694 LYTLKNG 700
               KNG
Sbjct: 877 EEVEKNG 883



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 231/489 (47%), Gaps = 45/489 (9%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VV DV+   +LI  + K G  ++A     +M    C+P V  Y  +++   + +   +A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP------------ 201
            ++  M+   C PN++T++ LI+G  KSG  E A ++   M     +P            
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 202 ----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
               N  TY  ++ GLC+ ++  +A  L   M   GC P+ + Y+AL++GFCK  ++DEA
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +     + G+ P + +YS LID LF+ KR D       KM E    P++V+Y  MI G
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           LS+  K  +A KL+  M E+G  P+   Y A+I GF   G +D+   L  E+  +   PN
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+T+LI   C  G +D+A  L  +M++      V  +  +I+G  K   +    LL  
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFILSLGLLEE 878

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL-------MQLAES 490
             + G  PT+ L               + +++ +  AG +  A ++        M +   
Sbjct: 879 VEKNGSAPTILL--------------YKVLIDNFVKAGRLEVALELHKEVISASMSMTAK 924

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            NL     Y SLI  F     I+ A +LF ++   G+ PD  T+  L+ GL RV R E+A
Sbjct: 925 KNL-----YTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979

Query: 551 FRIFGQMPQ 559
            ++   + Q
Sbjct: 980 LQLSDSLCQ 988



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 222/518 (42%), Gaps = 58/518 (11%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+   C+    + AL  L   +  G+ P   +Y+ L+    RA + D A   +R+M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             +  D    G   + L + GK ++A+ L+    +   VP+T  YN +I G C+    ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +     +PN  T+ IL+CG      +   +++ + M   GC+PS  +FN+L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 422 GLCKAGELEKANLLFYKME--------------IGK--------NPTLFLRLSQGGNR-- 457
             CK+ +   A  L  KME              IG          P  F    +  N   
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 458 ----VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
               V +K ++ +     C  G   KAYK++ ++  +G +PD  TY+ +I   C    + 
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LFKE++  G+ PD  TY  LI+   +    + A     +M ++GC P+   Y +L+
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 574 TWSCRRRKFSLAFSLW-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL--------- 623
               + +K S+A  L+ L   +            I+ + + G +E A Q           
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADI 626

Query: 624 --LEMDFKL-NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
             ++M FK+ N+    P    Y   + GLC+  +VK+A ++   +     E   IV    
Sbjct: 627 PDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA- 685

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              LI G CK   LD A +VF   ++ G+   P V  Y
Sbjct: 686 ---LIDGFCKAAKLDEAQEVFHKMVERGY--NPNVYTY 718



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 35/309 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G+ K    ++A E F KM E    P+VY Y+++++  F+ +   L L V  +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ +C PNIV ++ +I+GLSK  KT+ A K++  M ++G  PN  TYT +I G  +  + 
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL------------------ 261
           D+   LF +M   GC+P+FV Y  L+N  C    +DEA ALL                  
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 262 -----RSF----------EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
                R F          EK+G  P +  Y  LID   +A R + A   ++++    +  
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921

Query: 307 DVV--LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
                LY  +I   S A K+  A +L  DM   G++PD   +  L+ G   +   ++A  
Sbjct: 922 TAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981

Query: 365 LQVEIWKRD 373
           L   + + D
Sbjct: 982 LSDSLCQMD 990


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 241/503 (47%), Gaps = 23/503 (4%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           LRS   +V  D    LI    ++G  E A   + ++       +VY  N ++N A  K  
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN-ALCKDG 249

Query: 149 FLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            +  +  +   V+   + P+IVT++ LI+  S  G  E A ++++ M  +G  P  +TY 
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VI+GLC+  + + A  +F +M  SG SPD   Y +LL   CK   V E   +       
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             VP L  +S ++    R+   D+A  ++  + E  + PD V+Y ++I+G    G +  A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           M L ++M ++G   D   YN ++ G C   +L +A  L  E+ +R   P+++T TILI G
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKN 444
            C+ G + +A +LF KM++      V  +N L+DG  K G+++ A  ++  M   EI   
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P                 S   +V   C+ G + +A+++  ++      P ++  NS+I 
Sbjct: 550 PI----------------SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM--PQNGC 562
           G+C+ GN +      +++  +G  PD ++Y TLI G  R +    AF +  +M   Q G 
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653

Query: 563 TPSPAVYKSLMTWSCRRRKFSLA 585
            P    Y S++   CR+ +   A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEA 676



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 231/467 (49%), Gaps = 15/467 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LIS Y   G  E+A E    M      P VY YN V+N   +   +  A  V+ EM
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P+  T+  L+    K G      K+  +M  R ++P+   ++ ++S   +    
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A   F  +K++G  PD V Y  L+ G+C+   +  A+ L     + G    + +Y+ +
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL + K   EA   + +M E  + PD     ++I G  + G +++AM+L   M+E+ I
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D   YN L+ GF  +G +D A+ +  ++  ++ LP   +++IL+  +C  G + +A +
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           ++++M      P+V + N++I G C++G          KM           +S+G   V 
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM-----------ISEG--FVP 618

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAES--GNLPDIITYNSLINGFCKVGNINGALK 517
           D  S  T++  +     + KA+ ++ ++ E   G +PD+ TYNS+++GFC+   +  A  
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           + +++  +G+ PD  TY  +ING    D   +AFRI  +M Q G +P
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 202/431 (46%), Gaps = 11/431 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I+G  K G  E+A E F +M      PD   Y ++L  A +K   +    V+ +M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              + +P++V FS +++  ++SG  + A+   + + + G++P+   YTI+I G C+    
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L  +M   GC+ D V YN +L+G CK + + EA  L     +    P   + + L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  +      A   ++KM E++I  DVV Y  ++ G  + G +  A ++ +DM  + I
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +P    Y+ L+   C  G L +A  +  E+  ++  P       +I G CR+G   D + 
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
              KM   G  P    +N LI G  +   + KA  L  KME            + G  V 
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME-----------EEQGGLVP 655

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +  +++  +C    + +A  +L ++ E G  PD  TY  +INGF    N+  A ++ 
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715

Query: 520 KELQLKGLRPD 530
            E+  +G  PD
Sbjct: 716 DEMLQRGFSPD 726



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 141/582 (24%), Positives = 252/582 (43%), Gaps = 61/582 (10%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           NC  N   F LLI    ++ K   A +    +  +G   +      +I  L +I   + A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + ++ ++  SG   +    N ++N  CK  ++++    L   ++ G  P + +Y+ LI  
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                  +EA+     M  +   P V  Y  +I GL + GK + A ++ ++M   G+ PD
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           +  Y +L+   C  G + +   +  ++  RD +P+   F+ ++    R+G +D A   FN
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +++AG  P   ++  LI G C+ G +  A  L  +M           L QG     D  
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM-----------LQQGC--AMDVV 446

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++   C   ++ +A K+  ++ E    PD  T   LI+G CK+GN+  A++LF+++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           + K +R D VTY TL++G  +V   + A  I+  M      P+P  Y  L+   C +   
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566

Query: 583 SLAFSLWLQ-------------------YLRDISGRDDESMKSIEEFLQKGEVENAIQ-- 621
           + AF +W +                   Y R  +  D ES   +E+ + +G V + I   
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF--LEKMISEGFVPDCISYN 624

Query: 622 ----------------GLLEMDFKLNDFQ--LAP----YTIWLIGLCQDGQVKEALNIFS 659
                           GL++   K+ + Q  L P    Y   L G C+  Q+KEA  +  
Sbjct: 625 TLIYGFVREENMSKAFGLVK---KMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            ++E        +   +I+G   +  L  A  +    L+ GF
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 52  IWA--AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
           IWA    ++ L +  S S +++ L         ++  DE+ S N+     +   +I GY 
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN--CLPN 167
           + G+         KM      PD   YN ++    R++    A  +  +M +     +P+
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           + T++ +++G  +  + + A  +L +M +RG+ P++ TYT +I+G    +   EA+R+  
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716

Query: 228 KMKDSGCSPD 237
           +M   G SPD
Sbjct: 717 EMLQRGFSPD 726


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 247/529 (46%), Gaps = 50/529 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  K+GD   A  +  +M+E DC P+V  Y++++N   ++ L   A  V  +M
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  N +PNI T+++L++G  K+G  ++A+ +  +M Q G+  N F     ++ + +  R 
Sbjct: 191 VHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 250

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  KM   G  PD V Y  L++GF K  +V  AL L +       V  + +++ L
Sbjct: 251 EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVL 310

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ LF+  + D   + Y  M E  + PD+  Y  M+ G  + G    A++L ++M+ R +
Sbjct: 311 INCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL 369

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEI----------------------WKRDSLPN 377
           +P+    N +I G C+ G ++ A  +  E+                       + D++  
Sbjct: 370 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQ 429

Query: 378 TH-------------TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           TH              + ILI  +C+ GM   A  +   ME+ G       +NALI G C
Sbjct: 430 THELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYC 489

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            +  L++A + +  M       L  R+S       D  +   ++     AGLIH+A  +L
Sbjct: 490 ISSHLKRAFMTYSTM-------LSERVSP------DIETYNLLLGGLSKAGLIHEADDLL 536

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G +P+  TY +L+ G CKV N    L+++ E+ +KG  P    Y  LI    ++
Sbjct: 537 SEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKM 596

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF-SLAFSLWLQY 592
            + + A  +  +M   G +P+   Y  L+   C   K   L  +L + Y
Sbjct: 597 GKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISY 645



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 260/560 (46%), Gaps = 17/560 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +R  N  V++    VLI G +K G  ++A   F  + + +  P+   Y+A+++   +   
Sbjct: 87  VRGNNFDVIACT--VLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGD 144

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A +  +EM + +C+PN++T+S LING  K G    A K+L +M  +  +PN  TY I
Sbjct: 145 INGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAI 204

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ G  +    D A  L+ KMK  G   +    +A +N   +  R++EA  L+      G
Sbjct: 205 LLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGG 264

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P L +Y+ L+DG  ++ +   A    ++M  + +  D+V + V+I  L + GK  D  
Sbjct: 265 LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTE 323

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            + S MRE G+ PD   YN ++ G    G    A  L  E+  R  +PN  T  I+I G+
Sbjct: 324 SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGL 383

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +++A  +  +M   G +P+   +  L++   K+    +A+ +    E+  N  L 
Sbjct: 384 CEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKS---RRADTILQTHELLVNMQLK 440

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +          DK     ++   C  G+  KA  +L  + E G + D  TYN+LI+G+C 
Sbjct: 441 V----------DKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCI 490

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             ++  A   +  +  + + PD  TY  L+ GL +     +A  +  ++ + G  P+   
Sbjct: 491 SSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACT 550

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
           Y++LM   C+ R       ++ +  ++    +       I  F + G+++ A + + EM 
Sbjct: 551 YETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQ 610

Query: 628 FKLNDFQLAPYTIWLIGLCQ 647
            K        Y I + G C 
Sbjct: 611 TKGVSPTCTTYDILICGWCN 630



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/579 (27%), Positives = 260/579 (44%), Gaps = 55/579 (9%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           N  +EA  L+ +M  SG  PD V + ++L G CK  ++ E   LLR   K G      SY
Sbjct: 3   NGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSY 62

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + L+D LF+A +  EA      M       DV+   V+I GL ++G++K+A  L  ++ +
Sbjct: 63  TILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQ 122

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             +VP+   Y+ALI G C LG ++ A S   E+ ++D +PN  T++ LI G  + G++ D
Sbjct: 123 LNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHD 182

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A K+  KM      P++  +  L+DG  KAG  + A  L+ KM+            QGG 
Sbjct: 183 AFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMK------------QGGL 230

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           +  +   L   V     +G + +A +++ ++A  G  PD++ Y +L++GF K G ++ AL
Sbjct: 231 K-DNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSAL 289

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            L +E+  K +  D VT+  LIN L ++ +  D   I+  M + G +P  A Y +++  +
Sbjct: 290 NLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGN 348

Query: 577 CRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM--------- 626
            ++  ++ A  LW +   R +          I    + G +ENAI  L EM         
Sbjct: 349 FKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTS 408

Query: 627 ----------------DFKLNDFQLA----------PYTIWLIGLCQDGQVKEALNIFSV 660
                           D  L   +L            Y I +  LC+ G  ++A  +   
Sbjct: 409 TTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKD 468

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
           + E   I    +   LIHG C   +L  A   +   L           N LL  L  SK 
Sbjct: 469 MEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGL--SKA 526

Query: 721 NKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTR 759
                A  LL  +K  G   +AC Y   ++L+ G    R
Sbjct: 527 GLIHEADDLLSEIKKRGLVPNACTY---ETLMCGHCKVR 562



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 159/643 (24%), Positives = 284/643 (44%), Gaps = 36/643 (5%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+AL  + +M      PDV  + ++L    +         +  EM K+    N V++++L
Sbjct: 6   EEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTIL 65

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           ++ L K+GK   A+  L  M  RG   +    T++I GL +  +  EA  LF  +     
Sbjct: 66  LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 125

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            P+++ Y+AL++G CKL  ++ A + L   E+   VP + +YS LI+G  +     +A+ 
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFK 185

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             RKM  +   P++  Y +++ G  +AG    A+ L S M++ G+  + +  +A +    
Sbjct: 186 VLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMK 245

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +++A  L  ++      P+   +T L+ G  ++G V  A  L  +M        + 
Sbjct: 246 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 305

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            FN LI+ L K G+ +  ++     E+G +P              D A+  TM+      
Sbjct: 306 TFNVLINCLFKLGKSDTESIYSAMREMGLSP--------------DLATYNTMLNGNFKK 351

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G    A ++  ++     +P+ IT N +ING C+ G +  A+ + KE+ L GL P S TY
Sbjct: 352 GNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 411

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             L+N   +  R +   +    +          VY  L++  C+      A ++    L+
Sbjct: 412 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAV----LK 467

Query: 595 DISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           D+  R    D  +  + I  +     ++ A      M  +     +  Y + L GL + G
Sbjct: 468 DMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAG 527

Query: 650 QVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            + EA ++ S +   K  + P +C    L+ G CK       + ++   +  GFI +PR 
Sbjct: 528 LIHEADDLLSEIK--KRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRA 585

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVG-------YDLDAC 743
            N L+    FSK  K   A  L+  M++ G       YD+  C
Sbjct: 586 YNMLIG--YFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILIC 626



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 178/340 (52%), Gaps = 7/340 (2%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+ S NV      F VLI+  +K+G  +     +  M+E    PD+  YN +LN  F+K 
Sbjct: 294 EMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKG 352

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            +  AL ++ EM     +PN +T +++INGL ++G+ E AI +L EM   G+ P   TY 
Sbjct: 353 NWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYR 412

Query: 208 IVISGLCQINRAD---EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           I+++   +  RAD   + + L + M+      D   YN L++  CKL    +A A+L+  
Sbjct: 413 ILLNISSKSRRADTILQTHELLVNMQ---LKVDKDVYNILISNLCKLGMTRKATAVLKDM 469

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           E+ G +    +Y+ LI G   +     A+  Y  M  E++ PD+  Y +++ GLS+AG +
Sbjct: 470 EERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 529

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A  LLS++++RG+VP+   Y  L+ G C +    +   +  E+  +  +P    + +L
Sbjct: 530 HEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNML 589

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           I    + G +  A++L N+M+  G  P+   ++ LI G C
Sbjct: 590 IGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 629



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 225/525 (42%), Gaps = 66/525 (12%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQ--TLDELRSGNVSVVSDVFFVL---ISGYYKV 111
           RK +   A  +     +L    F   WQ   LD         + D  F+L   ++   + 
Sbjct: 188 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 247

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  E+A E   KM     +PD+  Y  +++   +      AL +  EM   N + +IVTF
Sbjct: 248 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 307

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LIN L K GK++    +   M + G+ P+  TY  +++G  +      A  L+ +MK 
Sbjct: 308 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               P+ +  N ++NG C+  R++ A+ +L+     G  P   +Y  L++   +++R D 
Sbjct: 367 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 426

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               +  +   +++ D  +Y ++I  L + G  + A  +L DM ERGI+ DT  YNALI 
Sbjct: 427 ILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIH 486

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C    L +A      +      P+  T+ +L+ G+ + G++ +A  L ++++K G  P
Sbjct: 487 GYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVP 546

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +   +  L+ G CK                 +N    LR+                   Y
Sbjct: 547 NACTYETLMCGHCKV----------------RNTKECLRI-------------------Y 571

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C             ++   G +P    YN LI  F K+G +  A +L  E+Q KG+ P  
Sbjct: 572 C-------------EMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTC 618

Query: 532 VTYGTLING------------LQRVDREEDAFRIFGQMPQNGCTP 564
            TY  LI G              ++    +A R+F +M   G  P
Sbjct: 619 TTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 663



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 23/293 (7%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   QT + L +  + V  DV+ +LIS   K+G   KA      M+E     D   YNA+
Sbjct: 425 DTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 484

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           ++          A   Y  M+     P+I T++LL+ GLSK+G    A  +L E+ +RG+
Sbjct: 485 IHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGL 544

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +PN  TY  ++ G C++    E  R++ +M   G  P   AYN L+  F K+ ++ +A  
Sbjct: 545 VPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKE 604

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L+   +  G  P   +Y  LI G          +    KM      PD+   G  ++   
Sbjct: 605 LMNEMQTKGVSPTCTTYDILICG----------WCNLLKM------PDL---GSTLKISY 645

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            A    +A +L  +M +RG VP       +   F   G    AR L    +KR
Sbjct: 646 RA----EAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 694


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/617 (27%), Positives = 273/617 (44%), Gaps = 100/617 (16%)

Query: 4   TLNE----VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           TL+E    +L I       E ALE L   +    V  V+       V  +FF WA KR  
Sbjct: 60  TLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKR-- 117

Query: 60  LRSFASNS----AVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVF-FVLISGYYKVGD 113
            R+F  +S    A+I  L +       W+T+ E+ RS  V   +D+   V + G  K+  
Sbjct: 118 -RNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKM-- 174

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFS 172
             KAL  F ++K   C+P    YN+++ +  ++        +Y EM  + +CLP+ VT+S
Sbjct: 175 VNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYS 234

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNK----------------------------- 203
            LI    K G+ + AI + DEM + G+ P                               
Sbjct: 235 ALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEK 294

Query: 204 ------FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                 +TYT +I G+ +  + +EAY +F+ M   GC PD V  N L+N   K  R+ +A
Sbjct: 295 GCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADA 354

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           + L    E     P + +Y+ +I  LF +K R  EA+ WY KM E  + P    Y ++I 
Sbjct: 355 IKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILID 414

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G  +  +V+ A+ LL +M E+G  P    Y +LI         + A  L  E+ +     
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYS 474

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +   + ++I  + + G + +A  LFN+M+K GC P V  +NAL+ G+ + G  ++A+ L 
Sbjct: 475 SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSL- 533

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
                                      L+TM E  CT                    PD+
Sbjct: 534 ---------------------------LRTMEENGCT--------------------PDL 546

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            ++N ++NGF + G   GA+++F  ++   ++PD V+Y T++  L R    E+A ++  +
Sbjct: 547 NSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKE 606

Query: 557 MPQNGCTPSPAVYKSLM 573
           M   G       Y S++
Sbjct: 607 MNSKGFEYDLITYSSIL 623



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 151/304 (49%), Gaps = 41/304 (13%)

Query: 99  DVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DV  +  LI+   K G    A++ F +M+   C P+V  YN V+   F  +       ++
Sbjct: 334 DVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLW 393

Query: 157 YEMVKLN-CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP-------------- 201
           YE +K N  +P+  T+S+LI+G  K+ + E A+ +L+EM ++G  P              
Sbjct: 394 YEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGK 453

Query: 202 ---------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
                                +   Y ++I  L +  R  EA  LF +MK  GC+PD  A
Sbjct: 454 AKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYA 513

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YNAL++G  ++   DEA +LLR+ E++G  P L S++ +++G  R      A   + +M 
Sbjct: 514 YNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMK 573

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
             KI+PDVV Y  ++  LS AG  ++A KL+ +M  +G   D   Y+++++    +G +D
Sbjct: 574 NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA---VGKID 630

Query: 361 QARS 364
           +  +
Sbjct: 631 EDHT 634



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 228/514 (44%), Gaps = 22/514 (4%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D   Y AL++   +   + E    ++   +   V      S ++  L +AK  ++A + +
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYNALIKGFCD 355
            ++   K +P    Y  MI  L + G  +   +L ++M   G  +PDT  Y+ALI  F  
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG  D A SL  E+ +    P    +T ++    + G V+ A  L  +M++ GC  +V  
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           +  LI G+ KAG++E+A  +F  M + G  P + L              +  ++     A
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVL--------------INNLINLLGKA 348

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLING-FCKVGNINGALKLFKELQLKGLRPDSVT 533
           G +  A K+  ++      P+++TYN++I   F      + A   +++++  G+ P S T
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFT 408

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  LI+G  + +R E A  +  +M + G  P PA Y SL+    + +++  A  L+ Q L
Sbjct: 409 YSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELF-QEL 467

Query: 594 RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           R+  G     + +  I+   + G +  A+    EM     +  +  Y   + G+ + G  
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMT 527

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            EA ++   + E        S   +++G  + G    A+++F   +KN  I +P V +Y 
Sbjct: 528 DEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFT-RMKNSKI-KPDVVSYN 585

Query: 712 LRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                 S+      A  L+  M S G++ D   Y
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITY 619



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 96/188 (51%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+  ++I+ L K   ++   +   ELR       + V+ V+I    K G   +A++ F +
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           MK+  C PDVY YNA+++   R  +   A ++   M +  C P++ + ++++NG +++G 
Sbjct: 502 MKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGG 561

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + AI+M   M    I P+  +Y  V+  L +    +EA +L  +M   G   D + Y++
Sbjct: 562 PKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSS 621

Query: 244 LLNGFCKL 251
           +L    K+
Sbjct: 622 ILEAVGKI 629



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 188/455 (41%), Gaps = 66/455 (14%)

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEI--------W---KRDSLPNTHTFTILICGMC 389
           PD      ++K   D  L+ +   + VEI        W   +R+   ++ T+  LI  + 
Sbjct: 76  PDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLD 135

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLF 448
             GM+ +  K   +M ++ C       + ++  L KA  + KA  +FY+++  K  PT  
Sbjct: 136 EAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT-- 193

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN-LPDIITYNSLINGFC 507
                         +  +M+      G   K +++  ++   G+ LPD +TY++LI  F 
Sbjct: 194 ------------SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFG 241

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K+G  + A+ LF E++  GL P +  Y T++    ++ R E A  +  +M + GC  +  
Sbjct: 242 KLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVY 301

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEM 626
            Y  L+    +  K   A+S+++  L++    D   + ++   L K G + +AI+   EM
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM 361

Query: 627 DF--------------------------------KLNDFQLAP----YTIWLIGLCQDGQ 650
           +                                 K+ +  + P    Y+I + G C+  +
Sbjct: 362 ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNR 421

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V++AL +   + E      P +   LI+ L K    + A ++F    +N      RV   
Sbjct: 422 VEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAV 481

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +++ L   K  +   A  L   MK +G + D   Y
Sbjct: 482 MIKHL--GKCGRLSEAVDLFNEMKKLGCNPDVYAY 514


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/560 (27%), Positives = 262/560 (46%), Gaps = 44/560 (7%)

Query: 152 ALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           AL V+  M K + C PN V++S+LI+GL + G+ E A  + D+M ++G  P+  TYT++I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC     D+A+ LF +M   GC P+   Y  L++G C+  +++EA  + R   KD   
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +Y+ LI+G  +  R   A+     M +   +P+V  +  ++ GL   GK   A+ L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M + G+ PD   YN LI G C  G ++ A  L   +   D  P+  TFT +I   C+
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL---FYKMEIGKNPTL 447
            G  D A      M + G          LIDG+CK G+   A  +     KM I   P  
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP-- 546

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                      H    +  M+ + C    + +   +L ++ + G +P ++TY +L++G  
Sbjct: 547 -----------HSLNVILDMLSKGCK---VKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G+I G+ ++ + ++L G  P+   Y  +INGL +  R E+A ++   M  +G +P+  
Sbjct: 593 RSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEM 626
            Y  ++                  Y+ +  G+ D +++++   +++G E+ + I   L  
Sbjct: 653 TYTVMVKG----------------YVNN--GKLDRALETVRAMVERGYELNDRIYSSLLQ 694

Query: 627 DFKLNDFQL---APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
            F L+   +      T+  I L +     E +N    +VE         C+ L+  LCK 
Sbjct: 695 GFVLSQKGIDNSEESTVSDIALRETD--PECINELISVVEQLGGCISGLCIFLVTRLCKE 752

Query: 684 GYLDLAMDVFLYTLKNGFIL 703
           G  D + D+    L+ G  L
Sbjct: 753 GRTDESNDLVQNVLERGVFL 772



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 213/455 (46%), Gaps = 19/455 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G  +VG  E+A     +M E  CQP    Y  ++     + L   A  ++ EM+
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN+ T+++LI+GL + GK E A  +  +M +  I P+  TY  +I+G C+  R  
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A+ L   M+   C P+   +N L+ G C++ +  +A+ LL+    +G  P + SY+ LI
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL R    + AY     M    IEPD + +  +I    + GK   A   L  M  +GI 
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D      LI G C +G    A  +   + K   L   H+  +++  + +   V +   +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVH 459
             K+ K G  PSV  +  L+DGL ++G++  +  +   M++ G  P ++           
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY----------- 617

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  ++   C  G + +A K+L  + +SG  P+ +TY  ++ G+   G ++ AL+  
Sbjct: 618 ---PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674

Query: 520 KELQLKGLRPDSVTYGTLINGL----QRVDREEDA 550
           + +  +G   +   Y +L+ G     + +D  E++
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEES 709



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 236/562 (41%), Gaps = 98/562 (17%)

Query: 256 EALALLRSF----EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           E L L+  F    E  GF      YS L+  L +      AY  YR+M  +     ++ Y
Sbjct: 139 EMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDY 198

Query: 312 GVMIRGLSEAG-----------------------------------KVKDAMKLLSDM-R 335
             ++  L + G                                    ++DA+K+   M +
Sbjct: 199 RTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSK 258

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E    P++  Y+ LI G C++G L++A  L+ ++ ++   P+T T+T+LI  +C  G++D
Sbjct: 259 EVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRLS 452
            A  LF++M   GC P+V  +  LIDGLC+ G++E+AN +  KM    I  +   +  L 
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378

Query: 453 QG---GNRVHDKASLQTMVEQ----------------YCTAGLIHKAYKILMQLAESGNL 493
            G     RV     L T++E+                 C  G  +KA  +L ++ ++G  
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PDI++YN LI+G C+ G++N A KL   +    + PD +T+  +IN   +  + + A   
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
            G M + G +       +L+   C+  K   A  +    ++        S+  I + L K
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558

Query: 614 G-----------------------EVENAIQGLLEMDFKLNDFQLA-------------P 637
           G                            + GL+        F++              P
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           YTI + GLCQ G+V+EA  + S + +        +   ++ G    G LD A++     +
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678

Query: 698 KNGFILRPRVCNYLLRSLLFSK 719
           + G+ L  R+ + LL+  + S+
Sbjct: 679 ERGYELNDRIYSSLLQGFVLSQ 700



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 128/520 (24%), Positives = 225/520 (43%), Gaps = 73/520 (14%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+GY K G    A E    M++  C+P+V  +N ++    R      A+ +   M+   
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+IV++++LI+GL + G    A K+L  M    I P+  T+T +I+  C+  +AD A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRR------------------------------ 253
                M   G S D V    L++G CK+ +                              
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556

Query: 254 -----VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
                V E LA+L    K G VP + +Y+ L+DGL R+     ++     M      P+V
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y ++I GL + G+V++A KLLS M++ G+ P+   Y  ++KG+ + G LD+A      
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676

Query: 369 IWKRDSLPNTHTFTILICG--MCRNGMVDDAQK------------------LFNKMEK-A 407
           + +R    N   ++ L+ G  + + G +D++++                  L + +E+  
Sbjct: 677 MVERGYELNDRIYSSLLQGFVLSQKG-IDNSEESTVSDIALRETDPECINELISVVEQLG 735

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           GC   + +F  L+  LCK G  +++N L   +           L +G   V  + ++  +
Sbjct: 736 GCISGLCIF--LVTRLCKEGRTDESNDLVQNV-----------LERG---VFLEKAMDII 779

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +E YC+     K  +++  + +SG +P   ++  +I G  K G+   A +L  EL     
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             +     T +  L   D   D   +   + Q  C   P 
Sbjct: 840 VVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERPT 879


>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
          Length = 1012

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 275/608 (45%), Gaps = 36/608 (5%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N  VVS  + +LI G  K G+ E+AL   GKM +   +P++  Y A++    +      A
Sbjct: 315 NRDVVS--YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 372

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++  ++ +    +   +  LI+G+ + G    A  ML +M QRGI P+  TY  VI+G
Sbjct: 373 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 432

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC   R  EA  +       G   D + Y+ LL+ + K++ +D  L + R F +      
Sbjct: 433 LCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 487

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L   + L+        Y EA A YR M E  + PD   Y  MI+G  + G++++A+++ +
Sbjct: 488 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 547

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           ++R+   V    CYN +I   C  G+LD A  + +E+W++    + HT   L+  +  NG
Sbjct: 548 ELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 606

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPTLF 448
                  L   +E+      +GM N  I  LCK G  E A  ++  M         P+  
Sbjct: 607 GDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI 666

Query: 449 LRLSQGGNRVHD---------KASLQTM--------VEQYCTAGLIHKAYKILMQLAESG 491
           L+      R  D         + +L +M        +   C  G + KA  +       G
Sbjct: 667 LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 726

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              + ITYNSLING C+ G +  AL+LF  L+  GL P  VTYG LI+ L +     DA 
Sbjct: 727 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 786

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           ++   M   G  P+  +Y S++   C+  +   A  +  + +      D  ++ S I+ +
Sbjct: 787 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 846

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +KG++E A+    E   K        +   + G C  G+++EA  +       + ++  
Sbjct: 847 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLL------REMLVS 900

Query: 671 PSCVKLIH 678
            S VKLI+
Sbjct: 901 ESVVKLIN 908



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 259/554 (46%), Gaps = 47/554 (8%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           S +I+G  K GK E+A+   +     G+L PN  TYT ++S LCQ+ + DE   L  +++
Sbjct: 216 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 275

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D G   D V Y+  ++G+ K   + +AL   R   + G    + SYS LIDGL +    +
Sbjct: 276 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 335

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA     KM +E +EP+++ Y  +IRGL + GK+++A  L + +   GI  D + Y  LI
Sbjct: 336 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 395

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G C  G L++A S+  ++ +R   P+  T+  +I G+C  G V +A ++       G  
Sbjct: 396 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVV 450

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT----------LFLRLSQGG----- 455
             V  ++ L+D   K   ++    +  +    K P            FL +   G     
Sbjct: 451 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 510

Query: 456 -------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                  +   D A+  TM++ YC  G I +A ++  +L +S ++   + YN +I+  CK
Sbjct: 511 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS-SVSAAVCYNRIIDALCK 569

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ A ++  EL  KGL  D  T  TL++ +     ++    +   + Q        +
Sbjct: 570 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGM 629

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRD---------ISGRDDESMKSIEEFLQKGEVENA 619
               +   C+R  F  A  +++   R          I     ++++S++ +L    V NA
Sbjct: 630 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLL---VVNA 686

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            +        L+   +  YTI + GLC++G + +ALN+ S        +   +   LI+G
Sbjct: 687 GET------TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLING 740

Query: 680 LCKRGYLDLAMDVF 693
           LC++G L  A+ +F
Sbjct: 741 LCQQGCLVEALRLF 754



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 239/566 (42%), Gaps = 70/566 (12%)

Query: 87  DELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           DE+  G   VV DV  +  L+  Y KV + +  LE   +  E     D+ + N +L    
Sbjct: 443 DEVSKG---VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 499

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
               +  A A+Y  M +++  P+  T++ +I G  K+G+ E A++M +E+ +  +     
Sbjct: 500 LMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAV 558

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL-----NG------------ 247
            Y  +I  LC+    D A  + +++ + G   D      LL     NG            
Sbjct: 559 CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGL 618

Query: 248 ------------------FCKLRRVDEALALLRSFEKDGFVPRLGS--YSCLIDGLFRAK 287
                              CK    + A+ +     + G      S     L+D L    
Sbjct: 619 EQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL---- 674

Query: 288 RYDEAYAWYRKMFEEKIEP-DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           R  +AY       E  +   DV+ Y ++I GL + G +  A+ L S  + RG+  +T  Y
Sbjct: 675 RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 734

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N+LI G C  G L +A  L   +     +P+  T+ ILI  +C+ G+  DA+KL + M  
Sbjct: 735 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 794

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQ 465
            G  P++ ++N+++DG CK G+ E A  +  +  +G+  P  F              ++ 
Sbjct: 795 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF--------------TVS 840

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +M++ YC  G + +A  +  +  +     D   +  LI GFC  G +  A  L +E+   
Sbjct: 841 SMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM--- 897

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIF-GQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            L  +SV    LIN +     E ++ R F  ++ + G  P        ++ +      +L
Sbjct: 898 -LVSESVV--KLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNL 954

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEF 610
                LQ+L D++  + +    + +F
Sbjct: 955 GSYQRLQFLNDVNEEEIKKKDYVHDF 980



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 199/457 (43%), Gaps = 56/457 (12%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VP-DTYCYNALIKGFCDLGLLDQAR 363
           P  + +  +I    E G++ +A+++L  M  + +  P D +  +A+I GFC +G  + A 
Sbjct: 173 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 232

Query: 364 SL-QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
              +  +     +PN  T+T L+  +C+ G VD+ + L  ++E  G       ++  I G
Sbjct: 233 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 292

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
             K G L  A +   +M           + +G NR  D  S   +++     G + +A  
Sbjct: 293 YFKGGALVDALMQDREM-----------VEKGMNR--DVVSYSILIDGLSKEGNVEEALG 339

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L ++ + G  P++ITY ++I G CK+G +  A  LF  +   G+  D   Y TLI+G+ 
Sbjct: 340 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 399

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-- 600
           R      AF + G M Q G  PS   Y +++   C   + S A  +    + D+      
Sbjct: 400 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTL 459

Query: 601 ----------DESMKSIEEFLQK----------------------GEVENAIQGLLEMDF 628
                     D  ++    FL+                       GE +   + + EMD 
Sbjct: 460 LDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL 519

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-KLIHGLCKRGYLD 687
             +    A Y   + G C+ GQ++EAL +F+ L   K+ V+   C  ++I  LCK+G LD
Sbjct: 520 TPDT---ATYATMIKGYCKTGQIEEALEMFNELR--KSSVSAAVCYNRIIDALCKKGMLD 574

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
            A +V +   + G  L       LL S+  +  +K +
Sbjct: 575 TATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 611



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 205/484 (42%), Gaps = 100/484 (20%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            +  +I GY K G  E+ALE F ++++      V  YN +++   +K +   A  V  E+ 
Sbjct: 526  YATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELW 584

Query: 161  KLNCLPNIVT-----FSLLING------------------------------LSKSGKTE 185
            +     +I T      S+  NG                              L K G  E
Sbjct: 585  EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 644

Query: 186  VAIKMLDEMTQRGI---LPNKF-------------------------------TYTIVIS 211
             AI++   M ++G+    P+                                  YTI+I+
Sbjct: 645  AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 704

Query: 212  GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            GLC+     +A  L    K  G + + + YN+L+NG C+   + EAL L  S E  G VP
Sbjct: 705  GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 764

Query: 272  RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               +Y  LID L +   + +A      M  + + P++++Y  ++ G  + G+ +DAM+++
Sbjct: 765  SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 824

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            S      + PD +  +++IKG+C  G +++A S+  E   ++   +   F  LI G C  
Sbjct: 825  SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 884

Query: 392  GMVDDAQ-------------KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            G +++A+             KL N+++ A    S  +   L++ LC+ G + +A  +  +
Sbjct: 885  GRMEEARGLLREMLVSESVVKLINRVD-AELAESESIRGFLVE-LCEQGRVPQAIKILDE 942

Query: 439  MEI-----GKNPTLFLRLS----------QGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
            +       GKN   + RL           +  + VHD  SL + V   CT+G + +A + 
Sbjct: 943  ISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEF 1002

Query: 484  LMQL 487
            +M +
Sbjct: 1003 VMSV 1006



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 218/483 (45%), Gaps = 32/483 (6%)

Query: 248 FCKLR-----RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           FC++      R    L  L+S  K GF P L S    +  L+R ++++    +Y ++  +
Sbjct: 37  FCEISMKLYPRTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSK 96

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLS-DMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +I  +  +Y ++        + +DA K ++  + +  I P T+  ++LI GF  +   D 
Sbjct: 97  QININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGF-SITRDDP 155

Query: 362 ARSLQVE---IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF-- 416
           ++ L +    +    + P++ TF  LI      G +D+A ++   M           F  
Sbjct: 156 SKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC 215

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           +A+I G CK G+ E A L F++  +             G  V +  +  T+V   C  G 
Sbjct: 216 SAVISGFCKIGKPELA-LGFFESAV-----------DSGVLVPNLVTYTTLVSALCQLGK 263

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +   ++ +L + G   D + Y++ I+G+ K G +  AL   +E+  KG+  D V+Y  
Sbjct: 264 VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSI 323

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI+GL +    E+A  + G+M + G  P+   Y +++   C+  K   AF L+ + L  +
Sbjct: 324 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL-SV 382

Query: 597 SGRDDESM--KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               DE +    I+   +KG +  A   L +M+ +     +  Y   + GLC  G+V EA
Sbjct: 383 GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 442

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +   +V    ++T  +   L+    K   +D  +++    L+    +   +CN LL++
Sbjct: 443 DEVSKGVV--GDVITYST---LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKA 497

Query: 715 LLF 717
            L 
Sbjct: 498 FLL 500



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 145/323 (44%), Gaps = 22/323 (6%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            + ++I+G  K G   KAL      K      +   YN+++N   ++   + AL ++  + 
Sbjct: 699  YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 758

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             +  +P+ VT+ +LI+ L K G    A K+LD M  +G++PN   Y  ++ G C++ + +
Sbjct: 759  NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 818

Query: 221  EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            +A R+  +      +PD    ++++ G+CK   ++EAL++   F+          +  LI
Sbjct: 819  DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 878

Query: 281  DGLFRAKRYDEAYAWYRKMF------------EEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             G     R +EA    R+M             + ++     + G ++  L E G+V  A+
Sbjct: 879  KGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQGRVPQAI 937

Query: 329  KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            K+L +     I    Y     +  +  L  L+     + EI K+D + + H+    +  +
Sbjct: 938  KILDE-----ISSTIYPSGKNLGSYQRLQFLNDVN--EEEIKKKDYVHDFHSLHSTVSSL 990

Query: 389  CRNGMVDDAQKLFNKMEKAGCFP 411
            C +G ++ A +    M    C P
Sbjct: 991  CTSGKLEQANEFV--MSVLSCMP 1011


>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g57250, mitochondrial; Flags: Precursor
 gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 971

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 275/608 (45%), Gaps = 36/608 (5%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N  VVS  + +LI G  K G+ E+AL   GKM +   +P++  Y A++    +      A
Sbjct: 274 NRDVVS--YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             ++  ++ +    +   +  LI+G+ + G    A  ML +M QRGI P+  TY  VI+G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC   R  EA  +       G   D + Y+ LL+ + K++ +D  L + R F +      
Sbjct: 392 LCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L   + L+        Y EA A YR M E  + PD   Y  MI+G  + G++++A+++ +
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           ++R+   V    CYN +I   C  G+LD A  + +E+W++    + HT   L+  +  NG
Sbjct: 507 ELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME----IGKNPTLF 448
                  L   +E+      +GM N  I  LCK G  E A  ++  M         P+  
Sbjct: 566 GDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI 625

Query: 449 LRLSQGGNRVHD---------KASLQTM--------VEQYCTAGLIHKAYKILMQLAESG 491
           L+      R  D         + +L +M        +   C  G + KA  +       G
Sbjct: 626 LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 685

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              + ITYNSLING C+ G +  AL+LF  L+  GL P  VTYG LI+ L +     DA 
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           ++   M   G  P+  +Y S++   C+  +   A  +  + +      D  ++ S I+ +
Sbjct: 746 KLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            +KG++E A+    E   K        +   + G C  G+++EA  +       + ++  
Sbjct: 806 CKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLL------REMLVS 859

Query: 671 PSCVKLIH 678
            S VKLI+
Sbjct: 860 ESVVKLIN 867



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 259/554 (46%), Gaps = 47/554 (8%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           S +I+G  K GK E+A+   +     G+L PN  TYT ++S LCQ+ + DE   L  +++
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D G   D V Y+  ++G+ K   + +AL   R   + G    + SYS LIDGL +    +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA     KM +E +EP+++ Y  +IRGL + GK+++A  L + +   GI  D + Y  LI
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G C  G L++A S+  ++ +R   P+  T+  +I G+C  G V +A ++       G  
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVV 409

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT----------LFLRLSQGG----- 455
             V  ++ L+D   K   ++    +  +    K P            FL +   G     
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469

Query: 456 -------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                  +   D A+  TM++ YC  G I +A ++  +L +S ++   + YN +I+  CK
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS-SVSAAVCYNRIIDALCK 528

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ A ++  EL  KGL  D  T  TL++ +     ++    +   + Q        +
Sbjct: 529 KGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGM 588

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRD---------ISGRDDESMKSIEEFLQKGEVENA 619
               +   C+R  F  A  +++   R          I     ++++S++ +L    V NA
Sbjct: 589 LNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLL---VVNA 645

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            +        L+   +  YTI + GLC++G + +ALN+ S        +   +   LI+G
Sbjct: 646 GET------TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLING 699

Query: 680 LCKRGYLDLAMDVF 693
           LC++G L  A+ +F
Sbjct: 700 LCQQGCLVEALRLF 713



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 135/566 (23%), Positives = 239/566 (42%), Gaps = 70/566 (12%)

Query: 87  DELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
           DE+  G   VV DV  +  L+  Y KV + +  LE   +  E     D+ + N +L    
Sbjct: 402 DEVSKG---VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 458

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
               +  A A+Y  M +++  P+  T++ +I G  K+G+ E A++M +E+ +  +     
Sbjct: 459 LMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAV 517

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL-----NG------------ 247
            Y  +I  LC+    D A  + +++ + G   D      LL     NG            
Sbjct: 518 CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGL 577

Query: 248 ------------------FCKLRRVDEALALLRSFEKDGFVPRLGS--YSCLIDGLFRAK 287
                              CK    + A+ +     + G      S     L+D L    
Sbjct: 578 EQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL---- 633

Query: 288 RYDEAYAWYRKMFEEKIEP-DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           R  +AY       E  +   DV+ Y ++I GL + G +  A+ L S  + RG+  +T  Y
Sbjct: 634 RSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITY 693

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N+LI G C  G L +A  L   +     +P+  T+ ILI  +C+ G+  DA+KL + M  
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS 753

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQ 465
            G  P++ ++N+++DG CK G+ E A  +  +  +G+  P  F              ++ 
Sbjct: 754 KGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAF--------------TVS 799

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +M++ YC  G + +A  +  +  +     D   +  LI GFC  G +  A  L +E+   
Sbjct: 800 SMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM--- 856

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIF-GQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            L  +SV    LIN +     E ++ R F  ++ + G  P        ++ +      +L
Sbjct: 857 -LVSESVV--KLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNL 913

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEF 610
                LQ+L D++  + +    + +F
Sbjct: 914 GSYQRLQFLNDVNEEEIKKKDYVHDF 939



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 199/457 (43%), Gaps = 56/457 (12%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VP-DTYCYNALIKGFCDLGLLDQAR 363
           P  + +  +I    E G++ +A+++L  M  + +  P D +  +A+I GFC +G  + A 
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191

Query: 364 SL-QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
              +  +     +PN  T+T L+  +C+ G VD+ + L  ++E  G       ++  I G
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
             K G L  A +   +M           + +G NR  D  S   +++     G + +A  
Sbjct: 252 YFKGGALVDALMQDREM-----------VEKGMNR--DVVSYSILIDGLSKEGNVEEALG 298

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L ++ + G  P++ITY ++I G CK+G +  A  LF  +   G+  D   Y TLI+G+ 
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-- 600
           R      AF + G M Q G  PS   Y +++   C   + S A  +    + D+      
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTL 418

Query: 601 ----------DESMKSIEEFLQK----------------------GEVENAIQGLLEMDF 628
                     D  ++    FL+                       GE +   + + EMD 
Sbjct: 419 LDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL 478

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV-KLIHGLCKRGYLD 687
             +    A Y   + G C+ GQ++EAL +F+ L   K+ V+   C  ++I  LCK+G LD
Sbjct: 479 TPDT---ATYATMIKGYCKTGQIEEALEMFNELR--KSSVSAAVCYNRIIDALCKKGMLD 533

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
            A +V +   + G  L       LL S+  +  +K +
Sbjct: 534 TATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 570



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 152/342 (44%), Gaps = 51/342 (14%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +++ ++++INGL K G    A+ +      RG+  N  TY  +I+GLCQ     EA RLF
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             +++ G  P  V Y  L++  CK     +A  LL S    G VP +  Y+ ++DG  + 
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            + ++A     +    ++ PD      MI+G  + G +++A+ + ++ +++ I  D + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDS-----------LPNTHTFTILICGMCRNGMVD 395
             LIKGFC  G +++AR L  E+   +S           L  + +    +  +C  G V 
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVP 893

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS--- 452
            A K+ +++     +PS                             GKN   + RL    
Sbjct: 894 QAIKILDEISST-IYPS-----------------------------GKNLGSYQRLQFLN 923

Query: 453 -------QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                  +  + VHD  SL + V   CT+G + +A + +M +
Sbjct: 924 DVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSV 965



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 214/473 (45%), Gaps = 27/473 (5%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R    L  L+S  K GF P L S    +  L+R ++++    +Y ++  ++I  +  +Y 
Sbjct: 6   RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65

Query: 313 VMIRGLSEAGKVKDAMKLLS-DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE--- 368
           ++        + +DA K ++  + +  I P T+  ++LI GF  +   D ++ L +    
Sbjct: 66  IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGF-SITRDDPSKGLLILRDC 124

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF--NALIDGLCKA 426
           +    + P++ TF  LI      G +D+A ++   M           F  +A+I G CK 
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G+ E A L F++  +             G  V +  +  T+V   C  G + +   ++ +
Sbjct: 185 GKPELA-LGFFESAV-----------DSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L + G   D + Y++ I+G+ K G +  AL   +E+  KG+  D V+Y  LI+GL +   
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM-- 604
            E+A  + G+M + G  P+   Y +++   C+  K   AF L+ + L  +    DE +  
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL-SVGIEVDEFLYV 351

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             I+   +KG +  A   L +M+ +     +  Y   + GLC  G+V EA  +   +V  
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-- 409

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
             ++T  +   L+    K   +D  +++    L+    +   +CN LL++ L 
Sbjct: 410 GDVITYST---LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 145/323 (44%), Gaps = 22/323 (6%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I+G  K G   KAL      K      +   YN+++N   ++   + AL ++  + 
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +  +P+ VT+ +LI+ L K G    A K+LD M  +G++PN   Y  ++ G C++ + +
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+  +      +PD    ++++ G+CK   ++EAL++   F+          +  LI
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837

Query: 281 DGLFRAKRYDEAYAWYRKMF------------EEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            G     R +EA    R+M             + ++     + G ++  L E G+V  A+
Sbjct: 838 KGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE-LCEQGRVPQAI 896

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           K+L +     I    Y     +  +  L  L+     + EI K+D + + H+    +  +
Sbjct: 897 KILDE-----ISSTIYPSGKNLGSYQRLQFLNDVN--EEEIKKKDYVHDFHSLHSTVSSL 949

Query: 389 CRNGMVDDAQKLFNKMEKAGCFP 411
           C +G ++ A +    M    C P
Sbjct: 950 CTSGKLEQANEFV--MSVLSCMP 970


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 264/549 (48%), Gaps = 15/549 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V   LI G +K G  ++A   F  + + +C P+   Y A+++   +      A ++  +M
Sbjct: 263 VCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDM 322

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   +PN+VT+S +ING +K G  +VA++++ +M  + I+PN + Y  +I G  +  + 
Sbjct: 323 EKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQ 382

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  L+ +MK +G   +    +A +N   + R+++EA  L +     G +    +Y+ L
Sbjct: 383 DAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSL 442

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +DG F+  R   A+    KM E  I+ DVV Y V+I GL   GK  DA  + S +RE G+
Sbjct: 443 MDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGL 501

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN +I  +C  G L+ A  L  E+     +PN+ T  IL+ G+ + G  + A  
Sbjct: 502 APDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAID 561

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           + N+M   G  P+V +  AL++  C   E     L  +K  +G        +    NR  
Sbjct: 562 VLNEMLLWGICPNVTIHRALLNA-CSKCERADTILQMHKRLVG--------MGLKANR-- 610

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                 +++   C  G+  +A  +L  + + G   D +TYN+LI+G  K  +I  AL  +
Sbjct: 611 --EVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATY 668

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            ++  +G+ P   TY  L+ GL        A+ I  +M  +G  P  ++Y +L++   + 
Sbjct: 669 TQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKI 728

Query: 580 RKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                A   + + + + +  +       IE+F + G+++ A + L EM  +      + Y
Sbjct: 729 GNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTY 788

Query: 639 TIWLIGLCQ 647
            I + G C 
Sbjct: 789 DILICGWCN 797



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 180/710 (25%), Positives = 308/710 (43%), Gaps = 69/710 (9%)

Query: 83  WQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           W    E+ S    V+ +VF   +L+  + K+G    AL+    ++  D   D   YN  +
Sbjct: 31  WDLYSEMLS--CGVLPNVFTHNILVHAWCKMGHLSLALD---LIRNVDIDVDTVTYNTAI 85

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE----VAIKMLDEMTQ 196
               ++ L          MVK +   +  T ++L+ G  + G  +    V   ++D+M  
Sbjct: 86  WGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMND 145

Query: 197 ----RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
                 + PN  TYT +IS  C+ +   EA  L+ +M   G  PD V Y++++NG CK  
Sbjct: 146 DDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRG 205

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
            + EA ALLR  +K G  P    Y+ L+D LF+A    E++ +  +M    +  D+V+  
Sbjct: 206 MLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCT 265

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I GL +AGK  +A  +   + +   +P+   Y A+I G+C LG +D A SL  ++ K+
Sbjct: 266 TLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKK 325

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             +PN  T++ +I G  + GM+D A ++  KM      P+  ++  LIDG  KAG+ + A
Sbjct: 326 QVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAA 385

Query: 433 NLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             L+ +M++ G     F+              +   +        + +A  +   +   G
Sbjct: 386 VDLYNEMKLNGLEENSFI--------------VDAFINNLKRGRKMEEAEGLCKYMMSKG 431

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            L D + Y SL++GF K G  + A  + +++   G++ D V Y  LINGL R+ +  DA 
Sbjct: 432 LLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAE 490

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI--------------- 596
            ++  + + G  P  A Y +++   C++ K   A  LW +                    
Sbjct: 491 SVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGL 550

Query: 597 --SGRDDESMKSIEEFLQKGEVENAI---------------QGLLEMDFKLNDFQLAP-- 637
             +G  + ++  + E L  G   N                   +L+M  +L    L    
Sbjct: 551 SKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANR 610

Query: 638 --YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             Y   +  LC  G  K A  + + + +        +   LIHG  K  +++ A+  +  
Sbjct: 611 EVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQ 670

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            L  G  + P +  Y L             AY +L +MK  G D DA LY
Sbjct: 671 MLNEG--VSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLY 718



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 237/536 (44%), Gaps = 74/536 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY K+GD + A      M++    P+V  Y++++N   +K +  +A+ +  +M
Sbjct: 298 TYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKM 357

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +  N +PN   ++ LI+G  K+GK + A+ + +EM   G+  N F     I+ L +  + 
Sbjct: 358 LDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKM 417

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L   M   G   D V Y +L++GF K  R   A  +     + G    + +Y+ L
Sbjct: 418 EEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVL 477

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL R  +YD A + Y  + E  + PD   Y  MI    + GK+++A+KL ++M+   +
Sbjct: 478 INGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSV 536

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVE--IW--------------------KRDSLPN 377
           +P++   N L+ G    G  ++A  +  E  +W                    + D++  
Sbjct: 537 MPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQ 596

Query: 378 TH-------------TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
            H              +  LI  +C  GM   A  + N M K G       +NALI G  
Sbjct: 597 MHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHF 656

Query: 425 KAGELEKANLLFYKM-----------------------EIGKNPTLFLRLSQGGNRVHDK 461
           K+  +EKA   + +M                        + K   +  ++   G  +   
Sbjct: 657 KSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSG--LDPD 714

Query: 462 ASL-QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           ASL  T++  +   G   +A K   ++   G +P   TYN LI  F KVG ++ A +L  
Sbjct: 715 ASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLN 774

Query: 521 ELQLKGLRPDSVTYGTLING---------LQRVDRE---EDAFRIFGQMPQNGCTP 564
           E+Q++ + P+S TY  LI G         L R+ ++    +A  +F +M + G  P
Sbjct: 775 EMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVP 830



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/582 (23%), Positives = 250/582 (42%), Gaps = 79/582 (13%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P +  ++ LI   + +G       +  EM   G+LPN FT+ I++   C++     A  
Sbjct: 8   VPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALD 67

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR-SFEKDGFVPRLGSYSC--LID 281
           L   +++     D V YN  + GFC+    ++    L    +KD F     S++C  L+ 
Sbjct: 68  L---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTF---FDSFTCNILVK 121

Query: 282 GLFR--AKRYDEAYAWYRKMF---------EEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           G  R  + +Y E   W                 +EP++V Y  +I    +   + +A+ L
Sbjct: 122 GFCRIGSVKYGE---WVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL------ 384
             +M   G +PD   Y+++I G C  G+L +A++L  E+ K    PN   + IL      
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 385 ---------------ICGMC--------------RNGMVDDAQKLFNKMEKAGCFPSVGM 415
                          +CG+               + G  D+A+ +F  + K  C P+   
Sbjct: 239 AGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNIT 298

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           + A+IDG CK G+++ A  L   ME  +              V +  +  +++  Y   G
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQ-------------VVPNVVTYSSIINGYTKKG 345

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
           ++  A +I+ ++ +   +P+   Y +LI+G  K G  + A+ L+ E++L GL  +S    
Sbjct: 346 MLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVD 405

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             IN L+R  + E+A  +   M   G       Y SLM    +  + S AF++  + + +
Sbjct: 406 AFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTM-AEKMAE 464

Query: 596 ISGRDDESMKS--IEEFLQKG--EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
              + D    +  I   L+ G  + E+   G+ E+    +    A Y   +   C+ G++
Sbjct: 465 TGIKFDVVAYNVLINGLLRLGKYDAESVYSGIRELGLAPDR---ATYNTMINAYCKQGKL 521

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           + A+ +++ +     +    +C  L+ GL K G  + A+DV 
Sbjct: 522 ENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVL 563



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 167/388 (43%), Gaps = 83/388 (21%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLI+G  ++G  + A   +  ++E    PD   YN ++N   ++     A+ ++ EM 
Sbjct: 474 YNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMK 532

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN------------------ 202
             + +PN +T ++L+ GLSK+G+TE AI +L+EM   GI PN                  
Sbjct: 533 GHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERAD 592

Query: 203 -----------------KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
                            +  Y  +I+ LC +     A  +   M   G S D V YNAL+
Sbjct: 593 TILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALI 652

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +G  K   +++ALA       +G  P + +Y+ L+ GL  A    +AY    KM +  ++
Sbjct: 653 HGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLD 712

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK-------------- 351
           PD  LY  +I G  + G  K+A+K   +M  +G+VP T  YN LI+              
Sbjct: 713 PDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQAREL 772

Query: 352 ---------------------GFCDLGL---LD---------QARSLQVEIWKRDSLPNT 378
                                G+C+L     LD         +AR+L  E+ ++  +P  
Sbjct: 773 LNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCE 832

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEK 406
           +T   +     R GMV DA+ +   M K
Sbjct: 833 NTLACISSTFARPGMVVDAKHMLKDMYK 860



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 196/460 (42%), Gaps = 18/460 (3%)

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I P + L+  +I   +  G V     L S+M   G++P+ + +N L+  +C +G L  
Sbjct: 5   HHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSL 64

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L   I   D   +T T+   I G C+ G+ +      + M K   F      N L+ 
Sbjct: 65  ALDL---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVK 121

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKA 480
           G C+ G ++      Y   +  N    +    G   +  +  +  T++  YC    + +A
Sbjct: 122 GFCRIGSVK------YGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEA 175

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  ++   G LPD++TY+S+ING CK G +  A  L +E+   G+ P+ V Y  L++ 
Sbjct: 176 LSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDS 235

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGR 599
           L +     ++F    QM   G +    V  +L+    +  K   A +++    + +    
Sbjct: 236 LFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPN 295

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           +      I+ + + G+++ A   L +M+ K     +  Y+  + G  + G +  A+ I  
Sbjct: 296 NITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMK 355

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            +++   +        LI G  K G  D A+D++     NG      + +  + +L   K
Sbjct: 356 KMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNL---K 412

Query: 720 DNKKVHAYHLLCR-MKSVGYDLDACLYPKTKSLLPGPWNT 758
             +K+     LC+ M S G  LD   Y    SL+ G + T
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYT---SLMDGFFKT 449



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 47/333 (14%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN----- 141
           +E++  +V   S    +L+ G  K G+ E+A++   +M  +   P+V I+ A+LN     
Sbjct: 529 NEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKC 588

Query: 142 ------IAFRKQLFLLAL----AVYYEMVKLNC-----------LPNI---------VTF 171
                 +   K+L  + L     VY  ++ + C           L N+         VT+
Sbjct: 589 ERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTY 648

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + LI+G  KS   E A+    +M   G+ P   TY +++ GL       +AY +  KMKD
Sbjct: 649 NALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKD 708

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           SG  PD   YN L++G  K+    EA+         G VP+  +Y+ LI+   +  + D+
Sbjct: 709 SGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQ 768

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRG------------LSEAGKVKDAMKLLSDMRERGI 339
           A     +M   ++ P+   Y ++I G            +S+     +A  L ++M E+G 
Sbjct: 769 ARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGF 828

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           VP       +   F   G++  A+ +  +++KR
Sbjct: 829 VPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 12/230 (5%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+ +    +S  +  +  LI G++K    EKAL ++ +M      P +  YN +L     
Sbjct: 633 LNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLA 692

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
             L   A  +  +M      P+   ++ LI+G  K G  + AIK   EM  +G++P   T
Sbjct: 693 AGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTST 752

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV----------- 254
           Y ++I    ++ + D+A  L  +M+     P+   Y+ L+ G+C L +            
Sbjct: 753 YNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTY 812

Query: 255 -DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
             EA  L     + GFVP   + +C+     R     +A    + M++ K
Sbjct: 813 RTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKRK 862


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 199/381 (52%), Gaps = 18/381 (4%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLF-LKMKDSGCSPDFVAYNALLNGFCKLR 252
           M   G+  N  T +I++ GLC+  R  +A   F   ++ +   PD V+Y  L+NG CKL 
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 253 RVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           RVD A  L R      G  P   +Y+ L+DGL +  R D A A   +  +    PDVV Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             ++  L + G+V +A+   + M E G VP    +NA+I G C    L  A  +  E+  
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           RD  PN  T++++I G+C++  +D+AQ+L ++M   GC P +  +  L+ G   AG L+ 
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  L  +M           +SQG   + D  +   ++++ C  G +  A++I  +L  + 
Sbjct: 241 ALGLLRRM-----------VSQGC--IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 287

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+++TY++LI G+C+   ++   K+ +E+     RP+ VTY T+I GL  VDR E+A+
Sbjct: 288 CSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAY 344

Query: 552 RIFGQMPQNGCTPSPAVYKSL 572
            +F +M + G  P    Y+ L
Sbjct: 345 GMFREMSECGFVPDARTYRGL 365



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 196/383 (51%), Gaps = 20/383 (5%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRL 225
           N  T S+++ GL + G+   A++  D   +     P+  +YT +I+GLC++ R D A+ L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 226 FLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           F KM    GC P+   YNAL++G CK  R+D A A++    K  F P + +Y+ L+  LF
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  R DEA A + +M EE   P +V +  +I GL  A ++ DA+++ ++M +R   P+  
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y+ +I G C    LD+A+ L   +      P+   +T L+ G    G +D A  L  +M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKAS 463
              GC P V  +  +ID LCK G ++ A+ +F ++   K +P +               +
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV--------------T 294

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  YC A  + +  K++ ++A     P+++TYN++I G   V     A  +F+E+ 
Sbjct: 295 YSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMS 351

Query: 524 LKGLRPDSVTYGTLINGLQRVDR 546
             G  PD+ TY  L   L+ +D 
Sbjct: 352 ECGFVPDARTYRGLKRALRMIDH 374



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 6/346 (1%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           +++ G  + G   +ALE F    E    QPDV  Y  ++N   +      A  ++ +MV 
Sbjct: 15  IILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVA 74

Query: 162 LN-CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN  T++ L++GL K  + + A  ++ E  +R   P+  TY  +++ L Q+ R D
Sbjct: 75  AGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVD 134

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA   F +M + G  P  V++NA++ G C+ RR+ +AL +        F P L +YS +I
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 194

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL ++ + DEA     +M  E   PD+V Y  ++ G S AG++  A+ LL  M  +G +
Sbjct: 195 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 254

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y  +I   C +G +D A  +  E+      PN  T++ LI G CR   VD+  K+
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP 445
             +M    C P+V  +N +I GL      E+A  +F +M E G  P
Sbjct: 315 MREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 17/307 (5%)

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
           + S ++ GL R  R  +A   +    E    +PDVV Y  +I GL + G+V  A  L   
Sbjct: 12  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71

Query: 334 M-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           M    G  P+ + YNAL+ G C    LD AR++  E  KRD  P+  T+  L+  + + G
Sbjct: 72  MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            VD+A   F +M + G  P++  FNA+I GLC+A  L  A  +F +M +   +P L    
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV--- 188

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +   +++  C +  + +A ++L ++   G  PD++ Y  L+ GF   G 
Sbjct: 189 -----------TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 237

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ AL L + +  +G  PD VTY  +I+ L +V R +DA  IF ++  N C+P+   Y +
Sbjct: 238 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 297

Query: 572 LMTWSCR 578
           L+   CR
Sbjct: 298 LIGGYCR 304



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 161/327 (49%), Gaps = 6/327 (1%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFF--IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTL 86
           +S TT+ + + K       F  F  + AA   R  +F  N A++  L K +  D     +
Sbjct: 47  VSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYN-ALVDGLCKQDRLDAARAVI 105

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
            E R  + +     +  L++  +++G  ++AL +F +M E    P +  +NA++    R 
Sbjct: 106 AEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRA 165

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +    AL V+ EM+  +  PN+VT+S++I+GL KS + + A ++LD M   G  P+   Y
Sbjct: 166 RRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAY 225

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           T ++ G     R D A  L  +M   GC PD V Y  +++  CK+ RVD+A  + R    
Sbjct: 226 TPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 285

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
           +   P + +YS LI G  RA R DE     R+M      P+VV Y  MI GLS   + ++
Sbjct: 286 NKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEE 342

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGF 353
           A  +  +M E G VPD   Y  L +  
Sbjct: 343 AYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 174/406 (42%), Gaps = 54/406 (13%)

Query: 349 LIKGFCDLGLLDQA-RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +++G C  G + QA       +    + P+  ++T LI G+C+ G VD A  LF KM  A
Sbjct: 16  ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75

Query: 408 G-CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
           G C P+   +NAL+DGLCK   L+ A  +  +             ++  +   D  +  T
Sbjct: 76  GGCRPNAFTYNALVDGLCKQDRLDAARAVIAE-------------ARKRDFAPDVVTYNT 122

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           ++      G + +A     Q+ E G +P ++++N++I G C+   +  AL++F E+  + 
Sbjct: 123 LMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD 182

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
             P+ VTY  +I+GL + D+ ++A ++  +M   GC P    Y  L+          L F
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV----------LGF 232

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           S         +GR D ++  +   + +G + + +                 YT+ +  LC
Sbjct: 233 S--------AAGRLDSALGLLRRMVSQGCIPDVVT----------------YTVVIDKLC 268

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           + G+V +A  IF  LV  K      +   LI G C+   +D    V           RP 
Sbjct: 269 KVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM-----REMACRPN 323

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           V  Y       S  ++   AY +   M   G+  DA  Y   K  L
Sbjct: 324 VVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 210/431 (48%), Gaps = 18/431 (4%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY  M K    PN+ T++LL+  L ++ +   A KMLDEM ++G  P+  TY  ++S LC
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +++R DEA  +   M      P   +YNA++   C+  R+ E  +++      G  P + 
Sbjct: 206 KLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 260

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ ++D   +A     A A   +M      P+VV +  ++RGL + G+V DA+ +   M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  P T  YN LI+G C +G L  A S+   + +    PN  T++ LI G  + G +
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
             A  ++N M ++GC P+V ++  ++D  CK     +A  L  KM +   P         
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP-------- 432

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  +  T++   C    + +A  +  ++   G +P+  TYN LI+G  + GN   
Sbjct: 433 -----NTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 487

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL +  E+Q  G+    VTY T+++GL +     +A    G+M   G  P+   + +++ 
Sbjct: 488 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 547

Query: 575 WSCRRRKFSLA 585
             C+  +  +A
Sbjct: 548 AYCKEGEVRMA 558



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 226/471 (47%), Gaps = 31/471 (6%)

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           D M + G+ PN FTY +++  LCQ NR   A ++  +M   GC PD V Y  +++  CKL
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 207

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            R+DEA  +L +       P   SY+ ++  L R  R  E ++    M    ++P+V+ Y
Sbjct: 208 DRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITY 262

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG----LLDQARSLQV 367
             ++    +AG+++ A  +L+ M   G  P+   + AL++G  D G     LD  R +  
Sbjct: 263 TTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVA 322

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E W     P+T ++ ILI G+C  G +  A  + N ME+ GCFP+V  ++ LIDG  KAG
Sbjct: 323 EGWA----PSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378

Query: 428 ELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           +L  A  ++  M   G  P + +                 MV+ +C   + ++A  ++ +
Sbjct: 379 DLGGAISIWNDMSRSGCKPNVVV--------------YTNMVDVFCKKLMFNQAKSLIDK 424

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +      P+ +T+N+LI   C    +  AL +F E++  G  P+  TY  LI+GL R   
Sbjct: 425 MLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGN 484

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR--KFSLAFSLWLQYLRDISGRDDESM 604
             DA  +  +M  +G   S   Y ++++  C+ R  + ++ F +    ++ I        
Sbjct: 485 CGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVF-VGKMIVQGIQPNAFTFS 543

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
             I  + ++GEV  A   L  M+       +  YTI +  LC   ++ +A+
Sbjct: 544 AIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAM 594



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 210/476 (44%), Gaps = 20/476 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L + N      + LDE+           +  ++S   K+   ++A E    M    
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP--- 221

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P    YNA++    R+       +V  +MV     PN++T++ +++   K+G+  +A 
Sbjct: 222 --PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L  M   G  PN  T+T ++ GL    R  +A  ++  M   G +P  V+YN L+ G 
Sbjct: 280 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 339

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C +  +  A ++L S E+ G  P + +YS LIDG  +A     A + +  M     +P+V
Sbjct: 340 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V+Y  M+    +      A  L+  M      P+T  +N LI+  CD   + +A  +  E
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +   +PN  T+  LI G+ R G   DA  +  +M+  G   S+  +N ++ GLC+   
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
             +A +   KM + G  P  F              +   ++  YC  G +  A  +L  +
Sbjct: 520 SREAMVFVGKMIVQGIQPNAF--------------TFSAIIHAYCKEGEVRMAAWMLGAM 565

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
                  +I+ Y  L+   C    +  A+    ++  +G+ P++VT+  L+ G+ R
Sbjct: 566 NVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 621



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 137/291 (47%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G   VGD + A      M++  C P+V  Y+ +++   +      A++++ +M 
Sbjct: 332 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 391

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C PN+V ++ +++   K      A  ++D+M      PN  T+  +I  LC   R  
Sbjct: 392 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 451

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +F +M+  GC P+   YN L++G  +     +AL ++   +  G    L +Y+ ++
Sbjct: 452 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 511

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL + +   EA  +  KM  + I+P+   +  +I    + G+V+ A  +L  M      
Sbjct: 512 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCH 571

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +   Y  L+   C+   L  A +  +++      PNT T+ +L+ G+ RN
Sbjct: 572 RNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 622



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/397 (21%), Positives = 174/397 (43%), Gaps = 21/397 (5%)

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +MR+ G+ P+ + YN L++  C    +  AR +  E+ ++   P+  T+  ++  +C+  
Sbjct: 149 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 208

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRL 451
            +D+A ++   M      P    +NA++  LC+   +++   +   M   G  P +    
Sbjct: 209 RLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI--- 260

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +  T+V+ +C AG +  A  IL ++  +G  P+++T+ +L+ G    G 
Sbjct: 261 -----------TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ AL +++ +  +G  P +V+Y  LI GL  V   + A  I   M Q+GC P+   Y +
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE-MDFKL 630
           L+    +      A S+W    R     +     ++ +   K  + N  + L++ M  + 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
                  +   +  LC   +V  AL +F  +     +    +  +LIHGL + G    A+
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
            +      +G  L     N ++  L  ++ +++   +
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVF 526



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 20/237 (8%)

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C   ++     +   + + G  P++ TYN L+   C+   +  A K+  E+  KG  PD 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VTY T+++ L ++DR ++A  +   MP     P  A Y +++   CR  +    FS+   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSV--- 246

Query: 592 YLRDISGRDDES-----MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            + D+ GR  +         ++ F + GE+  A   L  M        +  +T  + GL 
Sbjct: 247 -VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLF 305

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNG 700
            DG+V +AL+++  +V   A    PS V    LI GLC  G L  A  +     ++G
Sbjct: 306 DDGRVHDALDMWRWMV---AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHG 359



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 162/414 (39%), Gaps = 30/414 (7%)

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           W R   P+  + T      C   MV     +++ M K G  P+V  +N L+  LC+   +
Sbjct: 116 WLRAPPPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRV 175

Query: 430 EKANLLFYKMEIGKNP----------TLFLRLSQGGNRVHDKASLQTMVEQY-------C 472
             A  +  +M     P          ++  +L +        A++  +   Y       C
Sbjct: 176 GAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALC 235

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
               + + + ++  +   G  P++ITY ++++ FCK G +  A  +   + + G  P+ V
Sbjct: 236 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 295

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           T+  L+ GL    R  DA  ++  M   G  PS   Y  L+   C       A S+    
Sbjct: 296 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 355

Query: 593 LRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
            +     +  +  + I+ F + G++  AI    +M        +  YT  +   C+    
Sbjct: 356 EQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMF 415

Query: 652 KEALNIFS--VLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
            +A ++    +L  C     PP+ V    LI  LC    +  A+ VF    ++G +   R
Sbjct: 416 NQAKSLIDKMLLENC-----PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGR 470

Query: 707 VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTRE 760
             N L+  L   ++     A H++  M+S G +L    Y    S L     +RE
Sbjct: 471 TYNELIHGLF--REGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 522


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 285/616 (46%), Gaps = 56/616 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-NIAFRKQL-----FLLAL 153
           +F  L+  Y K  D   A +   KM++ +C+P   +YN ++ +I    +L     F LA 
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             Y EM+    + N V        L   GK E A K++ EM   G +P+  TY+ VI  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  +R + A+ LF +MK +G  PD   Y  L++ F K   + +A   L    +DG  P +
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI    +AK+   A   +  M  +   P+V+ Y  +I G  ++G ++ A ++ + 
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           MR    +PD                +D    ++  + ++   PN  T+  L+ G+C+   
Sbjct: 620 MRGDADIPD----------------VDMYFKIKNNVAEK---PNVVTYGALVDGLCKAHK 660

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
           V DA+ L   M   GC P+  +++ALIDG CKA +L++A  +F+KM E G NP ++   S
Sbjct: 661 VKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSS 720

Query: 453 QGGNRVHDK------ASLQTMVEQYCTAGLI---------------HKAYKILMQLAESG 491
                  DK        L  M+E  C   ++                +AYK+++ + E G
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKG 780

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P+++TY ++I+GF K G ++  L+LF+E+  KG  P+ VTY  LIN        ++A+
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAY 840

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
            +  +M Q       + Y  ++     +R+F L+  L  +  ++ S       K  I+ F
Sbjct: 841 ALLEEMKQTYWPKHVSSYCKVIEG--YKREFILSLGLLEEVEKNGSAPIILLYKVLIDNF 898

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           ++ G +E A++  L  +       +A     YT  +       ++  A  +F  ++    
Sbjct: 899 VKAGRLEVALE--LHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGV 956

Query: 667 IVTPPSCVKLIHGLCK 682
           I    + V L+ GL +
Sbjct: 957 IPDLGTFVHLLMGLIR 972



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 188/787 (23%), Positives = 328/787 (41%), Gaps = 100/787 (12%)

Query: 6   NEVLTILDTVTPIEPA--------LEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKR 57
           NE   ILD V   +          L      L+   V  ++   K+P++  +FF+WA ++
Sbjct: 105 NEAFLILDAVRNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLKSPELCVKFFLWAGRQ 164

Query: 58  KRLRSFASNSAVISMLLKPNGFD-LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
                  +    +  + +   +D +  + L E+R  +  V+  +  VLI    + G    
Sbjct: 165 IGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNV 224

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           ALE  G++K+F  +P    YNA++ +  R      A  V+ EM +L    +  T      
Sbjct: 225 ALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQ 284

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L K GK   A+ +++   +   +PN   Y  +ISGLC+ +  +EA     +M+ + C P
Sbjct: 285 ALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   Y  LL G    +++     +L     +G  P    ++ L+    ++  +  AY   
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 297 RKMFEEKIEPDVVLYGVMI----------------------------------------- 315
           +KM + + +P  V+Y ++I                                         
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDT-------------------------------- 343
           R L   GK + A K++ +M   G VPDT                                
Sbjct: 462 RCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVV 521

Query: 344 ---YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
              Y Y  LI  F   G++ QA +   E+ +    P   T+T LI    +   V  A +L
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANEL 581

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M   GCFP+V  + ALIDG CK+G +EKA  ++ +M    +        +  N V +
Sbjct: 582 FELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641

Query: 461 KASLQT---MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           K ++ T   +V+  C A  +  A  +L  +   G  P+ I Y++LI+GFCK   ++ A +
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +F ++   G  P+  TY +LI+ L +  R +   ++  +M +N C P+  +Y  ++    
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           +  K   A+ L L         +  +  + I+ F + G+V+  ++   EM  K       
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP---PSCVKLIHGLCKRGYLDLAMDVF 693
            YT+ +   C  G + EA   +++L E K    P    S  K+I G  KR ++ L++ + 
Sbjct: 822 TYTVLINHCCATGHLDEA---YALLEEMKQTYWPKHVSSYCKVIEGY-KREFI-LSLGLL 876

Query: 694 LYTLKNG 700
               KNG
Sbjct: 877 EEVEKNG 883



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 45/489 (9%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           VV DV+   +LI  + K G  ++A     +M    C+P V  Y  +++   + +   +A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP------------ 201
            ++  M+   C PN++T++ LI+G  KSG  E A ++   M     +P            
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 202 ----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
               N  TY  ++ GLC+ ++  +A  L   M   GC P+ + Y+AL++GFCK  ++DEA
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +     + G+ P + +YS LID LF+ KR D       KM E    P++V+Y  MI G
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           LS+  K  +A KL+  M E+G  P+   Y A+I GF   G +D+   L  E+  +   PN
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+T+LI   C  G +D+A  L  +M++      V  +  +I+G  K   +    LL  
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFILSLGLLEE 878

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL-------MQLAES 490
             + G  P + L               + +++ +  AG +  A ++        M +A  
Sbjct: 879 VEKNGSAPIILL--------------YKVLIDNFVKAGRLEVALELHKEVISASMSMAAK 924

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            NL     Y SLI  F     I  A +LF ++   G+ PD  T+  L+ GL RV R E+A
Sbjct: 925 KNL-----YTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979

Query: 551 FRIFGQMPQ 559
            ++   + Q
Sbjct: 980 LQLSDSLCQ 988



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 223/518 (43%), Gaps = 58/518 (11%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+   C+    + AL  L   +  G+ P   +Y+ L+    RA + D A   +R+M E
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             +  D    G   + L + GK ++A+ L+    +   VP+T  YN +I G C+    ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A      +     +PN  T+ IL+CG      +   +++ + M   GC+PS  +FN+L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 422 GLCKAGELEKANLLFYKME--------------IGK--------NPTLFLRLSQGGNR-- 457
             CK+ +   A  L  KME              IG          P  F    +  N   
Sbjct: 387 AYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEML 446

Query: 458 ----VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
               V +K ++ +     C  G   KAYK++ ++  +G +PD  TY+ +I   C    + 
Sbjct: 447 SAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVE 506

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LFKE++  G+ PD  TY  LI+   +    + A     +M ++GC P+   Y +L+
Sbjct: 507 NAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLI 566

Query: 574 TWSCRRRKFSLAFSLW-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL--------- 623
               + +K S+A  L+ L   +            I+ + + G +E A Q           
Sbjct: 567 HAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADI 626

Query: 624 --LEMDFKL-NDFQLAP----YTIWLIGLCQDGQVKEALNIFSVL----VECKAIVTPPS 672
             ++M FK+ N+    P    Y   + GLC+  +VK+A ++   +     E   IV    
Sbjct: 627 PDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDA- 685

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              LI G CK   LD A +VF   +++G+   P V  Y
Sbjct: 686 ---LIDGFCKAAKLDEAQEVFHKMVEHGY--NPNVYTY 718



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 35/309 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G+ K    ++A E F KM E    P+VY Y+++++  F+ +   L L V  +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ +C PNIV ++ +I+GLSK  KT+ A K++  M ++G  PN  TYT +I G  +  + 
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL------------------ 261
           D+   LF +M   GC+P+FV Y  L+N  C    +DEA ALL                  
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 262 -----RSF----------EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
                R F          EK+G  P +  Y  LID   +A R + A   ++++    +  
Sbjct: 862 IEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSM 921

Query: 307 DVV--LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
                LY  +I   S A K+  A +L  DM   G++PD   +  L+ G   +   ++A  
Sbjct: 922 AAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQ 981

Query: 365 LQVEIWKRD 373
           L   + + D
Sbjct: 982 LSDSLCQMD 990


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 223/460 (48%), Gaps = 15/460 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
              L  F KM+    +P+   +N ++N   +  L   A +V  +++K+   P+ +T +  
Sbjct: 87  HTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTF 146

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I G    G+   A+   D++   G   ++ +Y  +I+GLC++     A  L  ++     
Sbjct: 147 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLV 206

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D V Y+ +++  CK + V++A  L            + +YS LI G     +  +A  
Sbjct: 207 QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIG 266

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + KM  E I PDV  + +++    + G+VK+A   L+ M ++GI PD   YN+L+ G+C
Sbjct: 267 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
            +  ++ A+S+   +  R       ++ I+I G C+  MVD A KLF +M     FP+V 
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVI 386

Query: 415 MFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N+LIDGLCK+G +  A  L+    + G+ P              D  +  ++++  C 
Sbjct: 387 TYNSLIDGLCKSGRISYALELIDLMHDRGQQP--------------DIITYSSILDALCK 432

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
             L+ KA  +L++L + G  P++ TY  LI+G CK G +  A  +F++L +KG      T
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           Y  +I G       ++A  +  +M  N C P    Y+ ++
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIII 532



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 235/496 (47%), Gaps = 14/496 (2%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           F   + ++   D   A+  F  +   +  P    +  +L    + + +   L+++ +M  
Sbjct: 39  FSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEY 98

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               PN V F++LIN   + G    A  +L ++ + G  P+  T    I G C   +  +
Sbjct: 99  RGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQ 158

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A     K+   G   D V+Y  L+NG CK+     AL LLR  +       +  YS +ID
Sbjct: 159 ALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIID 218

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            + + K  ++A+  Y +M   +I  ++V Y  +I G    GK+KDA+ L + M    I P
Sbjct: 219 SMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINP 278

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D Y +N L+  FC  G + +A++    + K+   P+  T+  L+ G C    V+ A+ + 
Sbjct: 279 DVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSIL 338

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           N M   G   +V  +N +I+G CK   +++A  LF +M    +  +F  +          
Sbjct: 339 NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMH---HKQIFPNV---------- 385

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++  C +G I  A +++  + + G  PDIITY+S+++  CK   ++ A+ L  +
Sbjct: 386 ITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK 445

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           L+ +G+RP+  TY  LI+GL +  R EDA  IF  +   G   +   Y  ++   C    
Sbjct: 446 LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGL 505

Query: 582 FSLAFSLWLQYLRDIS 597
           F  A SL L  ++D S
Sbjct: 506 FDEALSL-LSKMKDNS 520



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 241/535 (45%), Gaps = 50/535 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ + + + ++   P    +  ++  L +         LF KM+  G  P+FV +N L+N
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC+L  +  A ++L    K G+ P   + +  I G     +  +A  ++ K+       
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V YG +I GL + G+ + A++LL  +  + +  D   Y+ +I   C    ++ A  L 
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  R    N  T++ LI G C  G + DA  LFNKM      P V  FN L+D  CK 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G +++A N L   M+ G  P              D  +  ++++ YC    ++ A  IL 
Sbjct: 294 GRVKEAKNGLAMMMKQGIKP--------------DIVTYNSLMDGYCLVNEVNMAKSILN 339

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            ++  G    + +YN +INGFCK+  ++ A+KLFKE+  K + P+ +TY +LI+GL +  
Sbjct: 340 TMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R   A  +   M   G  P    Y S++   C+      A +L ++ L+D          
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIK-LKD---------- 448

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                          QG+           +  YTI + GLC+ G++++A NIF  L+   
Sbjct: 449 ---------------QGIRP--------NMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
             +T  +   +I G C  G  D A+ + L  +K+   +   +   ++   LF KD
Sbjct: 486 YNLTVNTYTVMIQGFCSHGLFDEALSL-LSKMKDNSCIPDAITYEIIICSLFDKD 539



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 226/477 (47%), Gaps = 18/477 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +LI+ + ++G    A     K+ +   +PD    N  +     K     AL  + ++V
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            L    + V++  LINGL K G+T  A+++L  +  + +  +   Y+ +I  +C+    +
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A+ L+ +M     S + V Y+AL++GFC + ++ +A+ L      +   P + +++ L+
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D   +  R  EA      M ++ I+PD+V Y  ++ G     +V  A  +L+ M  RG+ 
Sbjct: 288 DAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVT 347

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
                YN +I GFC + ++DQA  L  E+  +   PN  T+  LI G+C++G +  A +L
Sbjct: 348 ATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALEL 407

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
            + M   G  P +  +++++D LCK   ++KA  L  K+ + G  P ++           
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMY----------- 456

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +   +++  C  G +  A  I   L   G    + TY  +I GFC  G  + AL L 
Sbjct: 457 ---TYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLL 513

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            +++     PD++TY  +I  L   D  + A ++  +M   G   S   Y S   WS
Sbjct: 514 SKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS---WS 567



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 222/468 (47%), Gaps = 27/468 (5%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + FDLY + +    S N+   S     LISG+  VG  + A+  F KM   +  PDVY +
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYS----ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +++   ++     A      M+K    P+IVT++ L++G     +  +A  +L+ M+ 
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+     +Y IVI+G C+I   D+A +LF +M      P+ + YN+L++G CK  R+  
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           AL L+      G  P + +YS ++D L +    D+A A   K+ ++ I P++  Y ++I 
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G+++DA  +  D+  +G       Y  +I+GFC  GL D+A SL  ++     +P
Sbjct: 464 GLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN--ALIDGLCKAGELEKANL 434
           +  T+ I+IC +      D A+KL  +M   G   S   +   +L      A  L   +L
Sbjct: 524 DAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSL 583

Query: 435 -LFYKMEIGKNPTLFLR-------LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                 E G    L L        L++   R  D      ++   C              
Sbjct: 584 QCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTC-------------D 630

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
            ++ G + D+ TY  +I GFC  G  + +L L  ++++ G  PD+VTY
Sbjct: 631 WSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 187/426 (43%), Gaps = 22/426 (5%)

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A + +  +  +   P  + +G ++  L ++      + L   M  RGI P+   +N LI
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC LGL+  A S+  +I K    P+T T    I G C  G +  A    +K+   G  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
                +  LI+GLCK GE   A  L  +++ GK   L            D     T+++ 
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVD-GKLVQL------------DVVMYSTIIDS 219

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C    ++ A+ +  ++       +I+TY++LI+GFC VG +  A+ LF ++  + + PD
Sbjct: 220 MCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPD 279

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS-LW 589
             T+  L++   +  R ++A      M + G  P    Y SLM   C   + ++A S L 
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILN 339

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
               R ++         I  F +   V+ A++   EM  K     +  Y   + GLC+ G
Sbjct: 340 TMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSG 399

Query: 650 QVKEALNIFSVLV---ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           ++  AL +  ++    +   I+T  S   ++  LCK   +D A+ + +     G  +RP 
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSS---ILDALCKNHLVDKAIALLIKLKDQG--IRPN 454

Query: 707 VCNYLL 712
           +  Y +
Sbjct: 455 MYTYTI 460



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 45/189 (23%)

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           + + V+I G+   G  ++AL    KMK+  C PD   Y  ++   F K     A  +  E
Sbjct: 491 NTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLRE 550

Query: 159 MVKLNCLPNIVTF------------------SLLINGLSKSGK----------------- 183
           M+    L + + +                  SL      +SG                  
Sbjct: 551 MITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTK 610

Query: 184 ----------TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
                       V I    + +++G + +  TYT++I G C     DE+  L  KM+ +G
Sbjct: 611 SNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNG 670

Query: 234 CSPDFVAYN 242
           C PD V Y+
Sbjct: 671 CIPDAVTYD 679


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 218/438 (49%), Gaps = 13/438 (2%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL ++ +M + + LP+IV FS L+  ++K  K E  I +   +   GI  + +++T +I 
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  R   A     KM   G  P  V + +L+NGFC + R  EA++L+      G+ P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ +ID L    + + A    + M +  I PDVV Y  +I  L  +G    + ++L
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           SDM   GI PD   ++ALI  +   G L +A+    E+ +R   PN  T+  LI G+C +
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G++D+A+K+ N +   G FP+   +N LI+G CKA  ++    +   M          R 
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS---------RD 353

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
              G    D  +  T+ + YC AG    A K+L ++   G  PD+ T+N L++G C  G 
Sbjct: 354 GVDG----DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I  AL   ++LQ        +TY  +I GL + D+ EDA+ +F  +   G +P    Y +
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469

Query: 572 LMTWSCRRRKFSLAFSLW 589
           +M    R+R +  A  L+
Sbjct: 470 MMIGLRRKRLWREAHELY 487



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 219/450 (48%), Gaps = 16/450 (3%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           AL  F  M E    P +  ++ +L    +   +   ++++  +  L    ++ +F+ LI+
Sbjct: 63  ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              +  +  +A+  L +M + G  P+  T+  +++G C +NR  EA  L  ++   G  P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YN +++  C+  +V+ AL +L+  +K G  P + +Y+ LI  LF +  +  +    
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M    I PDV+ +  +I    + G++ +A K  ++M +R + P+   YN+LI G C  
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           GLLD+A+ +   +  +   PN  T+  LI G C+   VDD  K+   M + G       +
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N L  G C+AG+   A  +  +M   G +P ++              +   +++  C  G
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY--------------TFNILLDGLCDHG 408

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I KA   L  L +S  +  IITYN +I G CK   +  A  LF  L LKG+ PD +TY 
Sbjct: 409 KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468

Query: 536 TLINGLQRVDREEDAFRIFGQM-PQNGCTP 564
           T++ GL+R     +A  ++ +M  ++G  P
Sbjct: 469 TMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 172/340 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++G+  V    +A+    ++     +P+V IYN +++    K     AL V   M 
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K+   P++VT++ LI  L  SG   V+ ++L +M + GI P+  T++ +I    +  +  
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA + + +M     +P+ V YN+L+NG C    +DEA  +L      GF P   +Y+ LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +G  +AKR D+       M  + ++ D   Y  + +G  +AGK   A K+L  M   G+ 
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD Y +N L+ G CD G + +A     ++ K  ++    T+ I+I G+C+   V+DA  L
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           F  +   G  P V  +  ++ GL +     +A+ L+ KM+
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 158/307 (51%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++  +I    + G    AL+    MK+   +PDV  YN+++   F    + ++  +  +M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +++   P+++TFS LI+   K G+   A K  +EM QR + PN  TY  +I+GLC     
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA ++   +   G  P+ V YN L+NG+CK +RVD+ + +L    +DG      +Y+ L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             G  +A ++  A     +M    + PD+  + +++ GL + GK+  A+  L D+++   
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           V     YN +IKG C    ++ A  L   +  +   P+  T+  ++ G+ R  +  +A +
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHE 485

Query: 400 LFNKMEK 406
           L+ KM+K
Sbjct: 486 LYRKMQK 492



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 172/377 (45%), Gaps = 16/377 (4%)

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           SGL  I + ++A  LF  M +S   P  V ++ LL    KL + +  ++L R  E  G  
Sbjct: 53  SGLHSI-KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGIS 111

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             L S++ LID   R  R   A +   KM +   EP +V +G ++ G     +  +AM L
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL 171

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           +  +   G  P+   YN +I   C+ G ++ A  +   + K    P+  T+  LI  +  
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
           +G    + ++ + M + G  P V  F+ALID   K G+L +A   + +M +   NP +  
Sbjct: 232 SGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI-- 289

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  +++   C  GL+ +A K+L  L   G  P+ +TYN+LING+CK 
Sbjct: 290 ------------VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
             ++  +K+   +   G+  D+ TY TL  G  +  +   A ++ G+M   G  P    +
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397

Query: 570 KSLMTWSCRRRKFSLAF 586
             L+   C   K   A 
Sbjct: 398 NILLDGLCDHGKIGKAL 414



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 183/397 (46%), Gaps = 1/397 (0%)

Query: 50  FFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYY 109
            F   A+   L S    S ++  + K N ++        L    +S     F  LI  + 
Sbjct: 66  LFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC 125

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +      AL   GKM +   +P +  + +++N       F  A+++  ++V L   PN+V
Sbjct: 126 RCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVV 185

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            ++ +I+ L + G+   A+ +L  M + GI P+  TY  +I+ L        + R+   M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G SPD + ++AL++ + K  ++ EA        +    P + +Y+ LI+GL      
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           DEA      +  +   P+ V Y  +I G  +A +V D MK+L  M   G+  DT+ YN L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
            +G+C  G    A  +   +      P+ +TF IL+ G+C +G +  A      ++K+  
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP 445
              +  +N +I GLCKA ++E A  LF  + + G +P
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+  +  G    +      M      PDV  ++A++++  ++   L A   Y EM++ +
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PNIVT++ LINGL   G  + A K+L+ +  +G  PN  TY  +I+G C+  R D+  
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           ++   M   G   D   YN L  G+C+  +   A  +L      G  P + +++ L+DGL
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +  +A      + + K    ++ Y ++I+GL +A KV+DA  L   +  +G+ PD 
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             Y  ++ G     L  +A  L  ++ K D L
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKEDGL 496



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 55/354 (15%)

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           +DA  LF  M ++   PS+  F+ L+  + K  + E    LF  +E+       L +S  
Sbjct: 61  NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM-------LGIS-- 111

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
               HD  S  T+++ +C    +  A   L ++ + G  P I+T+ SL+NGFC V     
Sbjct: 112 ----HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L  ++   G  P+ V Y T+I+ L    +   A  +   M + G  P    Y SL+T
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                R F              SG    S + + + ++ G   + I              
Sbjct: 228 -----RLFH-------------SGTWGVSARILSDMMRMGISPDVI-------------- 255

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKA---IVTPPSCVKLIHGLCKRGYLDLAMD 691
              ++  +    ++GQ+ EA   ++ +++      IVT  S   LI+GLC  G LD A  
Sbjct: 256 --TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS---LINGLCIHGLLDEAKK 310

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           V    +  GF       N L+    + K  +      +LC M   G D D   Y
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLING--YCKAKRVDDGMKILCVMSRDGVDGDTFTY 362


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 227/444 (51%), Gaps = 16/444 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ ++  M++   LP+IV FS L++ ++KS   ++ I +   M   GI  + +TY IVI+
Sbjct: 53  AIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVIN 112

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+ +R   A  +  KM   G  PD V  ++L+NGFC+  RV  A+ L+   E+     
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL 172

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y+ +IDG  +    + A   + +M  + +  D V Y  ++ GL  +G+  DA +L+
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLM 232

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            DM  R IVP+   + ALI  F   G   +A+    E+ +R   P+  T+  +I G+C +
Sbjct: 233 RDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMH 292

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G VD+A+++ + M   GCFP V  +N LI+G CK   +++   L  +M            
Sbjct: 293 GQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREM------------ 340

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           SQ G  V D  +  T+++ Y  AG    A +I  ++   G+ P+I TY+ L+ G C    
Sbjct: 341 SQRG-LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWR 396

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  AL LF+ +Q   +  D  TY  +I+G+  +   EDA+ +F  +   G  P    Y +
Sbjct: 397 VEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTT 456

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRD 595
           +++  CR+R +  A  L+ +   D
Sbjct: 457 MISGFCRKRLWDKADFLYRKMQED 480



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 222/450 (49%), Gaps = 16/450 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           ++A++ F  M +    P +  ++ +L+   + + + L +++++ M       ++ T++++
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN L +  +  +A+ ++ +M + G  P+  T + +I+G CQ NR   A  L  KM++  C
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             D V YN +++GFCK   V+ AL L    E+DG      +Y+ L+ GL  + R  +A  
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
             R M    I P+V+ +  +I      GK  +A K   +M  R I PD + YN++I G C
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G +D+A+ +   +  +   P+  T+  LI G C+   VD+  KL  +M + G      
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            FN +I G  +AG  + A  +F +M  G  P +               +   ++   C  
Sbjct: 351 TFNTIIQGYFQAGRPDAAQEIFSRM--GSRPNI--------------RTYSILLYGLCYN 394

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + KA  +   + +S    DI TYN +I+G C +GN+  A  LF  L  KGL PD VTY
Sbjct: 395 WRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTY 454

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            T+I+G  R    + A  ++ +M ++G  P
Sbjct: 455 TTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 213/429 (49%), Gaps = 16/429 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L+S   K  + +  +  F  M+      D+Y YN V+N   R   F++AL+V  +M+
Sbjct: 72  FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K    P++VT S LING  +  +   A+ ++ +M +     +   Y  +I G C+    +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVN 191

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  LF +M+  G   D V YN+L+ G C   R  +A  L+R       VP + +++ LI
Sbjct: 192 NALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALI 251

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   R  ++ EA  +Y +M    I+PDV  Y  MI GL   G+V +A ++L  M  +G  
Sbjct: 252 NAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCF 311

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN LI GFC    +D+   L  E+ +R  + +T TF  +I G  + G  D AQ++
Sbjct: 312 PDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEI 371

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F++M   G  P++  ++ L+ GLC    +EKA +LF  M             Q      D
Sbjct: 372 FSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESM-------------QKSEMELD 415

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   ++   C  G +  A+ +   L+  G  PD++TY ++I+GFC+    + A  L++
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475

Query: 521 ELQLKGLRP 529
           ++Q  GL P
Sbjct: 476 KMQEDGLLP 484



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 187/373 (50%), Gaps = 17/373 (4%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGF----------DLYWQTLDELRSGNVSVVS 98
           RF I  +   ++  F     V+++    NGF          DL  + ++E+R   + VV 
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK-MEEMRC-KLDVV- 175

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            ++  +I G+ K G    AL  FG+M+    + D   YN+++           A  +  +
Sbjct: 176 -IYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRD 234

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV  + +PN++TF+ LIN   + GK   A K  +EM +R I P+ FTY  +I GLC   +
Sbjct: 235 MVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ 294

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA ++   M   GC PD V YN L+NGFCK +RVDE   L+R   + G V    +++ 
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +I G F+A R D A   + +M      P++  Y +++ GL    +V+ A+ L   M++  
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  D   YN +I G C +G ++ A  L   +  +   P+  T+T +I G CR  + D A 
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471

Query: 399 KLFNKMEKAGCFP 411
            L+ KM++ G  P
Sbjct: 472 FLYRKMQEDGLLP 484



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 197/464 (42%), Gaps = 61/464 (13%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +DEA+ L  +  +   +P +  +S L+  + ++K YD   + +  M    I  D+  Y +
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I  L    +   A+ ++  M + G  PD    ++LI GFC    +  A  L  ++ +  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
              +   +  +I G C+ G+V++A  LF +ME+ G       +N+L+ GLC +G    A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 434 LLFYKM---EIGKNPTLFLRLSQGGNRVH-------------------DKASLQTMVEQY 471
            L   M   +I  N   F  L     R                     D  +  +M+   
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A +IL  +   G  PD++TYN+LINGFCK   ++   KL +E+  +GL  D+
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VT+ T+I G  +  R + A  IF +M   G  P+   Y  L+   C   +   A  L+  
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLF-- 404

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                            E +QK E+E                 +  Y I + G+C  G V
Sbjct: 405 -----------------ESMQKSEME---------------LDITTYNIVIHGMCMIGNV 432

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
           ++A ++F  L          +   +I G C++   D A   FLY
Sbjct: 433 EDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKA--DFLY 474


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 231/476 (48%), Gaps = 51/476 (10%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF  L+S Y + G    A++ F   K+ + +        +L    +    ++AL  Y 
Sbjct: 162 SFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYL 221

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           E++     PN+ TF++L+N L K GK + A  + DE+ + G+ P   ++  +I+G C+  
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             +E +RL + M++    PD   Y+AL++G CK  ++++A  L +     G VP   +++
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI+G  +  R D A   Y++MF + ++ D+VLY  +I GL + G  ++A K + +M +R
Sbjct: 342 TLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G++PD + Y  L+ G C  G L+ A  ++ E+ K     +   FT +I G+CR+G + DA
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
           ++   +M +AG  P  G +  ++DG CK G+                             
Sbjct: 462 ERTLREMLRAGLKPDDGTYTMVMDGFCKKGD----------------------------- 492

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                              +   +K+L ++   G++P +ITYN L+NG CK G +  A  
Sbjct: 493 -------------------VKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADM 533

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           L   +   G+ PD +TY  L+ G  +  +  D   +  +M   G     A Y+SL+
Sbjct: 534 LLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLL 586



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 209/452 (46%), Gaps = 48/452 (10%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           S  FV ++AL++ + +   V +A+   R  +K           CL++ + +      A  
Sbjct: 160 SSSFV-FDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALE 218

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +Y ++ +    P+V  + V++  L + GKVKDA  +  ++R+ G+ P    +N LI G+C
Sbjct: 219 FYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYC 278

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G L++   L++ + +    P+  T++ LI G+C+   ++DA  LF +M   G  P+  
Sbjct: 279 KSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDV 338

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            F  LI+G CK G ++ A  ++ +M            ++G     D     T+++  C  
Sbjct: 339 TFTTLINGQCKNGRVDLALEIYQQM-----------FTKGLKA--DLVLYNTLIDGLCKG 385

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G   +A K + ++ + G +PD  TY +L++G CK G++  AL++ KE+  +G++ D+V +
Sbjct: 386 GYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             +I+GL R  +  DA R   +M + G  P    Y  +M   C++    + F L      
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKL------ 499

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                       ++E    G +   I                 Y + + GLC+ GQVK A
Sbjct: 500 ------------LKEMQSDGHIPGVIT----------------YNVLMNGLCKQGQVKNA 531

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             + + ++    +    +   L+ G CK G L
Sbjct: 532 DMLLNAMLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 192/403 (47%), Gaps = 3/403 (0%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT 85
           +PF     +   ++K  +P V   F++         +  + + +++ L K          
Sbjct: 195 IPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLI 254

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+R   +   +  F  LI+GY K G+ E+       M+EF   PDV+ Y+A+++   +
Sbjct: 255 FDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCK 314

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  ++ EM     +PN VTF+ LING  K+G+ ++A+++  +M  +G+  +   
Sbjct: 315 ECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVL 374

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I GLC+     EA +   +M   G  PD   Y  LL+G CK   ++ AL + +   
Sbjct: 375 YNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMV 434

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K+G      +++ +I GL R  +  +A    R+M    ++PD   Y +++ G  + G VK
Sbjct: 435 KEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVK 494

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
              KLL +M+  G +P    YN L+ G C  G +  A  L   +     +P+  T+ IL+
Sbjct: 495 MGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILL 554

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
            G C++G + D Q +  +M   G       + +L+  L KA +
Sbjct: 555 QGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASK 594



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 191/433 (44%), Gaps = 22/433 (5%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           SLL   +S+ GK   +      +  +G L + F +  ++S   +     +A + F   K 
Sbjct: 131 SLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK 190

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
                 F     LL    K+     AL         G+ P + +++ L++ L +  +  +
Sbjct: 191 HNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKD 250

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + ++ +  ++P  V +  +I G  ++G +++  +L   M E  + PD + Y+ALI 
Sbjct: 251 AQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALID 310

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C    L+ A  L  E+  R  +PN  TFT LI G C+NG VD A +++ +M   G   
Sbjct: 311 GLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370

Query: 412 SVGMFNALIDGLCKA----------GELEKANLLFYKMEIG-------KNPTLFLRLSQG 454
            + ++N LIDGLCK           GE+ K  L+  K           K   L L L   
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMR 430

Query: 455 GNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
              V      D  +   ++   C  G I  A + L ++  +G  PD  TY  +++GFCK 
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKK 490

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++    KL KE+Q  G  P  +TY  L+NGL +  + ++A  +   M   G  P    Y
Sbjct: 491 GDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITY 550

Query: 570 KSLMTWSCRRRKF 582
             L+   C+  K 
Sbjct: 551 NILLQGHCKHGKL 563



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 31/399 (7%)

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           ++  ++   +E G V DA++     ++  + +P   C   L++    +     A    +E
Sbjct: 164 VFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGC-KCLLERMIKMSSPMVALEFYLE 222

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I      PN +TF +L+  +C+ G V DAQ +F+++ K G  P+   FN LI+G CK+G 
Sbjct: 223 ILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGN 282

Query: 429 LEKANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           LE+   L   ME  +  P +F              +   +++  C    +  A  +  ++
Sbjct: 283 LEEGFRLKMVMEEFRVFPDVF--------------TYSALIDGLCKECQLEDANHLFKEM 328

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G +P+ +T+ +LING CK G ++ AL++++++  KGL+ D V Y TLI+GL +    
Sbjct: 329 CDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYF 388

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
            +A +  G+M + G  P    Y +L+  SC+     LA  +  + +++    D+ +  +I
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448

Query: 608 EEFL-QKGEVENAIQGLLEM---DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
              L + G++ +A + L EM     K +D     YT+ + G C+ G VK     F +L E
Sbjct: 449 ISGLCRDGKIVDAERTLREMLRAGLKPDD---GTYTMVMDGFCKKGDVKMG---FKLLKE 502

Query: 664 CKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKN 699
            ++    P  +    L++GLCK+G +  A D+ L  + N
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNA-DMLLNAMLN 540



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 36/283 (12%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++ + C  G +  A  I  ++ ++G  P  +++N+LING+CK GN+    +L   +
Sbjct: 234 TFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVM 293

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +   + PD  TY  LI+GL +  + EDA  +F +M   G  P+   + +L+   C+    
Sbjct: 294 EEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCK---- 349

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
                         +GR D +++  ++   KG         L+ D  L       Y   +
Sbjct: 350 --------------NGRVDLALEIYQQMFTKG---------LKADLVL-------YNTLI 379

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GLC+ G  +EA      + +   I    +   L+ G CK G L+LA+++    +K G  
Sbjct: 380 DGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQ 439

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L       ++  L   +D K V A   L  M   G   D   Y
Sbjct: 440 LDNVAFTAIISGL--CRDGKIVDAERTLREMLRAGLKPDDGTY 480



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 34/187 (18%)

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL+ + E+   G  P+  T+  L+N L +  + +DA  IF ++ + G  P+   + +L+ 
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C+       F L +                +EEF    +V                  
Sbjct: 276 GYCKSGNLEEGFRLKM---------------VMEEFRVFPDV------------------ 302

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
              Y+  + GLC++ Q+++A ++F  + +   +    +   LI+G CK G +DLA++++ 
Sbjct: 303 -FTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQ 361

Query: 695 YTLKNGF 701
                G 
Sbjct: 362 QMFTKGL 368


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 266/587 (45%), Gaps = 57/587 (9%)

Query: 4   TLNE----VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           TL+E    +L I    +  E A+E L   +    V  V+      +   +FF WA KR+ 
Sbjct: 60  TLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQH 119

Query: 60  LRSFASNSAVISMLLKPNGF-DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
            +  ++    +   L+ +G  D  W+T+ ++     SV    +  ++    K     KAL
Sbjct: 120 FQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKAL 179

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLI-- 175
             F ++K   C P   +YN ++ +   +        +Y E+  + NC P+ +T+S LI  
Sbjct: 180 SVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISA 239

Query: 176 -------------------NGLS--------------KSGKTEVAIKMLDEMTQRGILPN 202
                              NGL               K  K E A+++++EM  +G  P 
Sbjct: 240 FGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPT 299

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
            FTYT +I GL ++ R D+AY LF  M   GC PD V  N L+N   +  R+++AL L  
Sbjct: 300 VFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFG 359

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
             +     P + +Y+ +I  +F +K    EA  W+ KM    I P    Y ++I G  + 
Sbjct: 360 KMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT 419

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            +V+ A+ LL +M E+G  P    Y +LI         + A  L  E+ +     +   +
Sbjct: 420 NRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVY 479

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
            ++I      G + DA  LF + EK GC P V  +NAL+ G+ +AG +++A+ L   M E
Sbjct: 480 AVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRE 539

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P              D  S   ++      G   +A ++  ++ ES  +PD ++YN
Sbjct: 540 NGCTP--------------DIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYN 585

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           ++++   + G    A KL +E++LKG   DS+TY +++  + +VD +
Sbjct: 586 TILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 34/415 (8%)

Query: 342 DTYCYNALIKGFCDLGLLDQA-RSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQK 399
           D+  Y ALI+   + GL+D+  R++Q  I    S+ P   +  + I G  +  MV+ A  
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAK--MVNKALS 180

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F +++   C P+  ++N LI  L   G  EK + L+ +            +   GN   
Sbjct: 181 VFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNE------------ICSEGNCSP 228

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  +   ++  +        A+++  ++ E+G  P    Y +++  + K+  +  AL+L 
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLV 288

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +E++ KG  P   TY  LI GL +V R +DA+ +F  M ++GC P   +  +L+    R 
Sbjct: 289 EEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRA 348

Query: 580 RKFSLAFSLW-----LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            +   A  L+     LQ   ++   +   +K+I  F  K     A     +M  K N   
Sbjct: 349 GRLEDALKLFGKMDSLQCAPNVVTYNT-VIKAI--FESKAPASEAALWFEKM--KANG-- 401

Query: 635 LAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           +AP    Y I + G C+  +V++AL +   + E      P +   LI  L +    + A 
Sbjct: 402 IAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAAN 461

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           ++F    +N      RV   +++   F    +   A  L C  + +G   D   Y
Sbjct: 462 ELFQELKENCGRSSARVYAVMIKH--FGNCGRLSDAVDLFCEXEKLGCSPDVYTY 514


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 228/455 (50%), Gaps = 28/455 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           DV+ +N++L  A  +   +  +A  Y +++   +  P++VT+ +L+NGL K+G+   A++
Sbjct: 135 DVFAFNSIL-AALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 190 MLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--GCSPDFVAYNALL 245
           +LD M+++   I P+  T   V+ GLC+  R  EA     +   S  GC P+ V YN L+
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + FC++  +  A  L+   E +G    + + + ++ GL RA R   A  ++R+  +  + 
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVW 311

Query: 306 PD----VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           P+     V Y  ++  L     V  AM+L  +    G  PD   Y  +I G    G L+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+   + +     +T  + ILI G CR   + +A +L  +M++ G  P V  +N L+ 
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CKAG+    + L  KM + G  P++               +  T+V  YC  G I +A
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVI--------------TFGTLVHGYCKVGKIDEA 477

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            +IL  + ESG  P+ + YN+LI+  CK G+++ A++LF E++ K +  +  T+  L+ G
Sbjct: 478 LRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L+  +  E AF +  QM +  C P       LM W
Sbjct: 538 LRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEW 572



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAW 295
           D  A+N++L    ++R V     +    +    V P + +Y  L++GL +A R  +A   
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 296 YRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--RGIVPDTYCYNALIK 351
              M  +   I PDVV    ++ GL ++G+V++A+  +        G  P+T  YN LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            FC +G +  A  L VE  + + +P N  T   ++ G+CR G    A + F   EK   +
Sbjct: 255 AFCRVGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVW 311

Query: 411 P----SVGMFNALIDGLCKAGELEKANLLFY-KMEIGKNP------TLFLRLSQGGNRVH 459
           P    +   ++ L+  L     +  A  LF+ KM  G +P      T+   L+Q G R+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG-RLE 370

Query: 460 DKASLQT----------------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D  S+ +                ++  +C    +H+AY++L ++ E G  PD+ TYN+L+
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CK G+     +L  ++   G +P  +T+GTL++G  +V + ++A RI   M ++G  
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW 589
           P+  +Y +L+ + C+R    LA  L+
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELF 516



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 6/332 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI  + +VG+   A E   KM+      ++   N ++    R      AL  + E  K  
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRT 309

Query: 164 CLP----NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             P    N VT+S L+  L  +    +A+++  E    G  P+   Y  +ISGL Q  R 
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  +   MK++G   D  AYN L+ GFC+ +R+ EA  LL+  ++ G  P + +Y+ L
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +A  +        KM ++  +P V+ +G ++ G  + GK+ +A+++L  M E GI
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI   C  G +D A  L  E+ ++    N  TF  L+ G+    M + A +
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           L ++M +  CFP     + L++ L   GE ++
Sbjct: 550 LMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKE---FDCQPDVYIYNA 138
           + LD +   ++ +  DV  +  ++ G  K G  ++AL +F + +      C P+   YN 
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL-AFVEQRMSSVHGCPPNTVTYNC 251

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   R     +A  +  +M       NIVT + ++ GL ++G+T  A++   E  +R 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRT 309

Query: 199 ILP----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           + P    N  TY+ ++  L   N    A  LF +    G SPD + Y  +++G  +  R+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           ++A ++  S ++ GF     +Y+ LI G  R KR  EAY   ++M E  I PDV  Y  +
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + G  +AG      +LL  M + G  P    +  L+ G+C +G +D+A  +   + +   
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN   +  LI  +C+ G VD A +LF++M++     +V  FNAL+ GL      EKA  
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 435 LFYKM 439
           L  +M
Sbjct: 550 LMDQM 554



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 39/444 (8%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           DV  +  ++  L+    V    ++ + M+    + PD   Y  L+ G C  G +  A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 366 QVEIWKRD--SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA--GCFPSVGMFNALID 421
              + ++D    P+  T   ++ G+C++G V +A     +   +  GC P+   +N LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             C+ G +  A  L  KME    P              +  +L T+V   C AG    A 
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVP-------------QNIVTLNTIVGGLCRAGRTGAAL 301

Query: 482 KILMQLAE-----SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +   +         GN    +TY++L+       N+  A++LF E   +G  PD++ Y T
Sbjct: 302 EFFREKRTVWPEGKGN---AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFT 358

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +I+GL +  R EDA  +   M + G       Y  L+   CR+++   A+ L LQ ++++
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYEL-LQEMKEV 417

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVK 652
             R D  + +    L           + E+  K+ D    P  I     + G C+ G++ 
Sbjct: 418 GIRPD--VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 653 EALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           EAL I   + E    + P + +   LI  LCKRG +DLA+++F    +          N 
Sbjct: 476 EALRILRSMDESG--IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMK 734
           LL+ L     N    A+ L+ +M+
Sbjct: 534 LLKGL--RDKNMPEKAFELMDQMR 555



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 35/295 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  LL  N   +  +   E  S   S  + ++F +ISG  + G  E A      MKE
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + D   YN                                   +LI G  +  +   
Sbjct: 382 AGFKLDTKAYN-----------------------------------ILIAGFCRKKRLHE 406

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L EM + GI P+  TY  ++SG C+         L  KM D GC P  + +  L++
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CK+ ++DEAL +LRS ++ G  P    Y+ LID L +    D A   + +M E+ +  
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +V  +  +++GL +    + A +L+  MRE    PD    + L++    +G  D+
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 257/567 (45%), Gaps = 25/567 (4%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-LRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           S+  V+ +I+  K+      +F WA+     + S ++  A+I  L     FD   Q LDE
Sbjct: 35  SQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDE 94

Query: 89  L-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           +  S       D+F  +I G  +       ++    + +F   P + I+N++L++  ++ 
Sbjct: 95  MPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKED 154

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           + +        M+      +  TF +L+ GL  + +     K+L  +  RG+ PN   Y 
Sbjct: 155 IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYN 214

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            ++  LC+  +   A  L  +M+D    P+ V +N L++G+CK     +AL LL      
Sbjct: 215 TLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSM 270

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GFVP + S + +++ L  A R  EA     ++       DVV Y  +I+G   AGKVK  
Sbjct: 271 GFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVG 330

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILIC 386
           +  L  M  +G +P+   YN LI GF + G+LD A  L  ++ K D +  N  TF  LI 
Sbjct: 331 LHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDM-KTDGIKWNFVTFDTLIR 389

Query: 387 GMCRNGMVDDAQKLFNKME--KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           G+C    ++D   +   ME  K G    +  +N++I GL K    +++     KM     
Sbjct: 390 GLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM----- 444

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                     GN          M+ ++C  G I  A ++  Q+ + G +P I+ YN L++
Sbjct: 445 ----------GNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVH 494

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GF K GN+  A++L  E+      P   T+  +I G  R  + E A ++   +   GC P
Sbjct: 495 GFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVP 554

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +   Y  L+   CR      A  +++Q
Sbjct: 555 NTETYSPLIDVLCRNGDLQKAMQVFMQ 581



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 248/556 (44%), Gaps = 70/556 (12%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           TY  +I  LC   R D   +L  +M  S G  P    +  ++ G  + R     + +L  
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDL 130

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK-MFEEKIEPDVVLYGVMIRGLSEAG 322
             K    P L  ++ ++D L + +  D A  +YRK M    +E D   +G++++GL    
Sbjct: 131 VYKFHGSPSLKIFNSILDVLVK-EDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTN 189

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++ +  KLL  ++ RG+ P+T  YN L+   C  G + +AR+L  E+      PN  TF 
Sbjct: 190 RIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFN 245

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
           ILI G C+ G    A  L  K    G  P V     +++ LC AG   +A  +  ++E  
Sbjct: 246 ILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVE-- 303

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                    S GG  + D  +  T+++ +C AG +      L Q+   G LP++ TYN L
Sbjct: 304 ---------SMGG--LLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVL 352

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI--------- 553
           I+GF + G ++ AL LF +++  G++ + VT+ TLI GL   +R ED F I         
Sbjct: 353 ISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKE 412

Query: 554 -------------FGQMPQNGCTPSP------------AVYKSLMTWS-CRRRKFSLAFS 587
                        +G + +NG   S             AV +SLM    C++     A  
Sbjct: 413 GSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKR 472

Query: 588 LWLQYLRDISGRDDESMKSI-------EEFLQKGEVENAIQGLLEMDFKLNDFQL-APYT 639
           ++ Q +      D+  + SI         F ++G V  A++ + EM    N F + + + 
Sbjct: 473 VYDQMI------DEGGIPSILVYNCLVHGFSKQGNVREAVELMNEM-IANNCFPIPSTFN 525

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + G C+ G+V+ AL +   +     +    +   LI  LC+ G L  AM VF+  +  
Sbjct: 526 AVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDK 585

Query: 700 GFILRPRVCNYLLRSL 715
           G +    + N LL SL
Sbjct: 586 GILPDLFIWNSLLLSL 601



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 202/426 (47%), Gaps = 29/426 (6%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           +K     P+  +YN +L+   R      A  +  EM      PN VTF++LI+G  K G 
Sbjct: 201 IKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGN 256

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           +  A+ +L++    G +P+  + T V+  LC   R  EA  +  +++  G   D VAYN 
Sbjct: 257 SVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNT 316

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ GFC   +V   L  L+  E  G +P + +Y+ LI G   +   D A   +  M  + 
Sbjct: 317 LIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDG 376

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--RGIVPDTYCYNALIKGFCDLGLLDQ 361
           I+ + V +  +IRGL    +++D   +L  M E   G       YN++I G       D+
Sbjct: 377 IKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDE 436

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           +     ++   +  P     +++I   C+ G ++DA++++++M   G  PS+ ++N L+ 
Sbjct: 437 SAEFLTKMG--NLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVH 494

Query: 422 GLCKAGELEKANLLFYKMEIGKN----PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           G  K G + +A  L  +M I  N    P+ F                  ++  +C  G +
Sbjct: 495 GFSKQGNVREAVELMNEM-IANNCFPIPSTF----------------NAVITGFCRQGKV 537

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
             A K++  +   G +P+  TY+ LI+  C+ G++  A+++F ++  KG+ PD   + +L
Sbjct: 538 ESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSL 597

Query: 538 INGLQR 543
           +  L +
Sbjct: 598 LLSLSQ 603



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 35/367 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LISGY K G+  +AL    K       PDV     VL I       + A  V   +
Sbjct: 243 TFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERV 302

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             +  L ++V ++ LI G   +GK +V +  L +M  +G LPN  TY ++ISG  +    
Sbjct: 303 ESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGML 362

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE--KDGFVPRLGSYS 277
           D A  LF  MK  G   +FV ++ L+ G C   R+++  ++L   E  K+G    +  Y+
Sbjct: 363 DLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYN 422

Query: 278 CLIDGLFRAKRYDEAYAW---------------------------------YRKMFEEKI 304
            +I GL +   +DE+  +                                 Y +M +E  
Sbjct: 423 SIIYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGG 482

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P +++Y  ++ G S+ G V++A++L+++M      P    +NA+I GFC  G ++ A  
Sbjct: 483 IPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALK 542

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  +I  R  +PNT T++ LI  +CRNG +  A ++F +M   G  P + ++N+L+  L 
Sbjct: 543 LVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLS 602

Query: 425 KAGELEK 431
           +     K
Sbjct: 603 QERHFSK 609


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 172/694 (24%), Positives = 307/694 (44%), Gaps = 61/694 (8%)

Query: 26  LPFLSKTTVTSVIMKT-KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQ 84
           L FL++  V+ V+ +           F+W   R     ++    ++   +K        +
Sbjct: 180 LRFLAQDIVSWVVARIGPGRSKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALE 239

Query: 85  TLDELR----SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
            L ++R    + N S +S +F +LI    + GDC    + FG +      P+ + +N ++
Sbjct: 240 ILSKMREVGVTPNPSAISILFRLLI----RAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 295

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               RK    +  A+ + M K  C P++ +++++IN     G++  A+ +L+ M + G  
Sbjct: 296 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 355

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+  T+  +I   C+    + A + F +++D G S + + YN +++G+ K R + +A  L
Sbjct: 356 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 415

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                    VP   +++ L+ G +R  + ++     R +    +  D  L  V + GL  
Sbjct: 416 FEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 475

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AG+  +AMKLL ++  +GI P    +N++I  + + GL ++A      + K    P++ T
Sbjct: 476 AGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 535

Query: 381 FTILICGMCRNGMVDDAQ-KLFNKMEKAGCFPSVGM-FNALIDGLCKAGELEKANLLFYK 438
            + L+  + R G +D+A   L++ ++K   FP   M F  L+DG  + G +  A  L+ +
Sbjct: 536 CSSLLISLVRKGSLDEAWIALYDMIDKG--FPVTNMAFTVLLDGYFRIGAVNMAESLWNE 593

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M             +G     D  +    +   C +GL+  AY +   +   G +P+   
Sbjct: 594 M-------------KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFV 640

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YNSLI GFCKVG +N ALKL +E+  +GL PD  T   +I GL +  R + A   F  M 
Sbjct: 641 YNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMC 700

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           + G +P    Y +L+   C+      AF        D+ G DD  MK  +   +      
Sbjct: 701 RMGLSPDIVTYNTLIDGYCK------AF--------DVGGADDLMMKMSDSGWEP----- 741

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                           L  Y I + G C   ++  A+ I   L+    +    +   +I+
Sbjct: 742 ---------------DLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMIN 786

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            +C    LD AM +    LK  F+      N LL
Sbjct: 787 AVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 819



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 245/509 (48%), Gaps = 17/509 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  +I  + K G+ E A + F ++++     +  +YN +++   + +    A  ++ EM
Sbjct: 360 TFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEM 419

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              + +P+ +TF+ L+ G  + GK E   ++L +++  G+L +     + ++GLC   R 
Sbjct: 420 RTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRY 479

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA +L   +   G  P  VA+N+++  +      + A        K G  P   + S L
Sbjct: 480 DEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 539

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           +  L R    DEA+     M ++      + + V++ G    G V  A  L ++M+ RG+
Sbjct: 540 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 599

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   + A I G C  GL+  A  +  ++ ++  +PN   +  LI G C+ G +++A K
Sbjct: 600 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 659

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           L  +M K G  P +   N +I GLCK G ++ A   F  M  +G +P             
Sbjct: 660 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSP------------- 706

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +  T+++ YC A  +  A  ++M++++SG  PD+ TYN  I+G+C V  IN A+ +
Sbjct: 707 -DIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMI 765

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +EL   G+ P++VTY T+IN +  V  +  A  +  ++ +    P+      L++  C+
Sbjct: 766 LEELISVGIVPNTVTYNTMINAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCK 824

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           +     A   W Q L +I    DE+   +
Sbjct: 825 QGMPEKAI-FWGQKLSEIHLDFDETTHKL 852



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 3/338 (0%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           SVV+  F  +I+ Y   G  E+A  ++G M +F   P     +++L    RK     A  
Sbjct: 497 SVVA--FNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 554

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
             Y+M+        + F++L++G  + G   +A  + +EM  RG+ P+   +   I+GLC
Sbjct: 555 ALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLC 614

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
                 +AY +F  M   G  P+   YN+L+ GFCK+ +++EAL L+R   K G +P + 
Sbjct: 615 ISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIF 674

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + +I GL +  R   A   +  M    + PD+V Y  +I G  +A  V  A  L+  M
Sbjct: 675 TVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 734

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G  PD   YN  I G+C +  +++A  +  E+     +PNT T+  +I  +C N ++
Sbjct: 735 SDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVIL 793

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           D A  L  K+ K    P+    N L+   CK G  EKA
Sbjct: 794 DHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 831



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S ++ S+++  L++    D  W  L ++      V +  F VL+ GY+++G    A   +
Sbjct: 532 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 591

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +MK     PD   + A +N      L   A  V+ +M++   +PN   ++ LI G  K 
Sbjct: 592 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 651

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK   A+K++ EM +RG+LP+ FT  ++I GLC+  R   A   F+ M   G SPD V Y
Sbjct: 652 GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTY 711

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L++G+CK   V  A  L+      G+ P L +Y+  I G    ++ + A     ++  
Sbjct: 712 NTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELIS 771

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I P+ V Y  MI  +     +  AM L + + +   VP+T   N L+  FC  G+ ++
Sbjct: 772 VGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEK 830

Query: 362 A 362
           A
Sbjct: 831 A 831


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 279/605 (46%), Gaps = 58/605 (9%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V V ++ F +LI G        +A+   GKMK F C PD   YN +L++  +K     A 
Sbjct: 44  VEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEAR 103

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +  +M      PN  TF++L++G  K G  + A +++D M +  +LP+  TYT +I GL
Sbjct: 104 DLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGL 163

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  + DEA+RL  +M++    P  V YN L+NG  +     +   L+   E  G  P  
Sbjct: 164 CKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNA 223

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ ++    +  + D A    RKM E    PD V +  +  G  +AG++ +A +++ +
Sbjct: 224 VTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDE 283

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  +G+  ++   N ++   C    LD A  L     KR    +  ++  LI G  + G 
Sbjct: 284 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVG- 342

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
                  +++M++    PS+  +  +I GLC++G+ +++        I K   L   L  
Sbjct: 343 ---KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQS--------IDKCNEL---LES 388

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
           G   V D+ +  T++  YC  G + KA+    ++ +    PD+ T N L+ G C  G ++
Sbjct: 389 G--LVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLD 446

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            ALKLFK    KG   D+VT+ T+I+GL    R E+AF +  +M +    P    + +++
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAIL 506

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG-LLEMDFKLN- 631
           +        +LA              D   MK  EEF+  G VE   QG L +    LN 
Sbjct: 507 S--------ALA--------------DAGRMKEAEEFMS-GIVE---QGKLQDQTISLNK 540

Query: 632 -------------DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                        D     ++  +  LC  G+ K+A+++     +   I+   + + L+ 
Sbjct: 541 RKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLME 600

Query: 679 GLCKR 683
           GL KR
Sbjct: 601 GLIKR 605



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 240/551 (43%), Gaps = 43/551 (7%)

Query: 55  AKRKRLRSFASN---SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
            K K    F  N   + ++ +L K    +     L ++++  +    + F +L+SGY K+
Sbjct: 72  GKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKL 131

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  ++A E    M   +  PDV  Y  ++    +      A  +  EM  L  LP++VT+
Sbjct: 132 GWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTY 191

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LING  +   +    +++DEM  +G+ PN  TY +V+    +  + D A     KM++
Sbjct: 192 NMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 251

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           SG SPD V +N L NG+CK  R+ EA  ++    + G      + + ++  L   ++ D+
Sbjct: 252 SGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 311

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           AY       +     D V YG +I G  + GK         +M+E+ I+P    Y  +I 
Sbjct: 312 AYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIG 367

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G C  G  DQ+     E+ +   +P+  T+  +I G CR G VD A    NKM K    P
Sbjct: 368 GLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKP 427

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            +   N L+ GLC  G L+KA L  +K  I K   +            D  +  T++   
Sbjct: 428 DLFTCNILVRGLCTEGMLDKA-LKLFKTWISKGKAI------------DAVTFNTIISGL 474

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG----- 526
           C  G   +A+ +L ++ E    PD  T+N++++     G +  A +    +  +G     
Sbjct: 475 CEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQ 534

Query: 527 ------------------LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
                               P+SV +   IN L    + +DA  +  +  Q G     + 
Sbjct: 535 TISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKST 594

Query: 569 YKSLMTWSCRR 579
           Y SLM    +R
Sbjct: 595 YISLMEGLIKR 605



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 222/501 (44%), Gaps = 50/501 (9%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRR---VDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           MK     P+ +  N L+    +      V  + A+     K G      +++ LI G   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  EA     KM      PD V Y  ++  L + GK+ +A  LL DM+  G+ P+   
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N L+ G+C LG L +A  +   + + + LP+  T+T LI G+C++G +D+A +L ++ME
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
                P V  +N LI+G  +     K   L  +ME             G     +  +  
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEME-------------GKGVKPNAVTYN 227

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +V+ Y   G +  A   L ++ ESG  PD +T+N+L NG+CK G ++ A ++  E+  K
Sbjct: 228 VVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRK 287

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM----------TW 575
           GL+ +SVT  T+++ L    + +DA+++     + G       Y +L+           W
Sbjct: 288 GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXW 347

Query: 576 SCRRRK----FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI----------- 620
              + K      + +   +  L   SG+ D+S+    E L+ G V +             
Sbjct: 348 DEMKEKEIIPSIITYGTMIGGLCR-SGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCR 406

Query: 621 QGLLEMDFKLND------FQLAPYT--IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           +G ++  F   +      F+   +T  I + GLC +G + +AL +F   +     +   +
Sbjct: 407 EGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVT 466

Query: 673 CVKLIHGLCKRGYLDLAMDVF 693
              +I GLC+ G  + A D+ 
Sbjct: 467 FNTIISGLCEEGRFEEAFDLL 487



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 203/449 (45%), Gaps = 21/449 (4%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAY---AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           P L + + LI  L R       Y   A +  + +  +E +   + ++I G     K+ +A
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           + L+  M+     PD   YN ++   C  G L++AR L +++      PN +TF IL+ G
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C+ G + +A ++ + M +    P V  +  LI GLCK G++++A  L  +ME   N  L
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME---NLKL 184

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
              +      V     +    E  C++ L  K ++++ ++   G  P+ +TYN ++  + 
Sbjct: 185 LPHV------VTYNMLINGCFE--CSSSL--KGFELIDEMEGKGVKPNAVTYNVVVKWYV 234

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G ++ A    ++++  G  PD VT+ TL NG  +  R  +AFR+  +M + G   +  
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSV 294

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
              +++   C  RK   A+ L     +     D+ S  + I  + + G+         EM
Sbjct: 295 TLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEM 350

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             K     +  Y   + GLC+ G+  ++++  + L+E   +    +   +I G C+ G +
Sbjct: 351 KEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQV 410

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           D A       +K  F      CN L+R L
Sbjct: 411 DKAFHFRNKMVKKSFKPDLFTCNILVRGL 439


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 228/455 (50%), Gaps = 28/455 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           DV+ +N++L  A  +   +  +A  Y +++   +  P++VT+ +L+NGL K+G+   A++
Sbjct: 135 DVFAFNSIL-AALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 190 MLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--GCSPDFVAYNALL 245
           +LD M+++   I P+  T   V+ GLC+  R  EA     +   S  GC P+ V YN L+
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + FC++  +  A  L+   E +G    + + + ++ GL RA R   A  ++R+  +  + 
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVW 311

Query: 306 PD----VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           P+     V Y  ++  L     V  AM+L  +    G  PD   Y  +I G    G L+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+   + +     +T  + ILI G CR   + +A +L  +M++ G  P V  +N L+ 
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CKAG+    + L  KM + G  P++               +  T+V  YC  G I +A
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVI--------------TFGTLVHGYCKVGKIDEA 477

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            +IL  + ESG  P+ + YN+LI+  CK G+++ A++LF E++ K +  +  T+  L+ G
Sbjct: 478 LRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L+  +  E AF +  QM +  C P       LM W
Sbjct: 538 LRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEW 572



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAW 295
           D  A+N++L    ++R V     +    +    V P + +Y  L++GL +A R  +A   
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 296 YRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--RGIVPDTYCYNALIK 351
              M  +   I PDVV    ++ GL ++G+V++A+  +        G  P+T  YN LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            FC +G +  A  L VE  + + +P N  T   ++ G+CR G    A + F   EK   +
Sbjct: 255 AFCRVGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVW 311

Query: 411 P----SVGMFNALIDGLCKAGELEKANLLFY-KMEIGKNP------TLFLRLSQGGNRVH 459
           P    +   ++ L+  L     +  A  LF+ KM  G +P      T+   L+Q G R+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG-RLE 370

Query: 460 DKASLQT----------------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D  S+ +                ++  +C    +H+AY++L ++ E G  PD+ TYN+L+
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CK G+     +L  ++   G +P  +T+GTL++G  +V + ++A RI   M ++G  
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW 589
           P+  +Y +L+ + C+R    LA  L+
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELF 516



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 6/332 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI  + +VG+   A E   KM+      ++   N ++    R      AL  + E  K  
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRT 309

Query: 164 CLP----NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             P    N VT+S L+  L  +    +A+++  E    G  P+   Y  +ISGL Q  R 
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  +   MK++G   D  AYN L+ GFC+ +R+ EA  LL+  ++ G  P + +Y+ L
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G  +A  +        KM ++  +P V+ +G ++ G  + GK+ +A+++L  M E GI
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI   C  G +D A  L  E+ ++    N  TF  L+ G+    M + A +
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           L ++M +  CFP     + L++ L   GE ++
Sbjct: 550 LMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKE---FDCQPDVYIYNA 138
           + LD +   ++ +  DV  +  ++ G  K G  ++AL +F + +      C P+   YN 
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL-AFVEQRMSSVHGCPPNTVTYNC 251

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   R     +A  +  +M       NIVT + ++ GL ++G+T  A++   E  +R 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRT 309

Query: 199 ILP----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           + P    N  TY+ ++  L   N    A  LF +    G SPD + Y  +++G  +  R+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           ++A ++  S ++ GF     +Y+ LI G  R KR  EAY   ++M E  I PDV  Y  +
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + G  +AG      +LL  M + G  P    +  L+ G+C +G +D+A  +   + +   
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN   +  LI  +C+ G VD A +LF++M++     +V  FNAL+ GL      EKA  
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 435 LFYKM 439
           L  +M
Sbjct: 550 LMDQM 554



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 39/444 (8%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           DV  +  ++  L+    V    ++ + M+    + PD   Y  L+ G C  G +  A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 366 QVEIWKRD--SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA--GCFPSVGMFNALID 421
              + ++D    P+  T   ++ G+C++G V +A     +   +  GC P+   +N LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             C+ G +  A  L  KME    P              +  +L T+V   C AG    A 
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVP-------------QNIVTLNTIVGGLCRAGRTGAAL 301

Query: 482 KILMQLAE-----SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +   +         GN    +TY++L+       N+  A++LF E   +G  PD++ Y T
Sbjct: 302 EFFREKRTVWPEGKGN---AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFT 358

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +I+GL +  R EDA  +   M + G       Y  L+   CR+++   A+ L LQ ++++
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYEL-LQEMKEV 417

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVK 652
             R D  + +    L           + E+  K+ D    P  I     + G C+ G++ 
Sbjct: 418 GIRPD--VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 653 EALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           EAL I   + E    + P + +   LI  LCKRG +DLA+++F    +          N 
Sbjct: 476 EALRILRSMDESG--IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMK 734
           LL+ L     N    A+ L+ +M+
Sbjct: 534 LLKGL--RDKNMPEKAFELMDQMR 555



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 128/295 (43%), Gaps = 35/295 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++  LL  N   +  +   E  S   S  + ++F +ISG  + G  E A      MKE
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + D   YN                                   +LI G  +  +   
Sbjct: 382 AGFKLDTKAYN-----------------------------------ILIAGFCRKKRLHE 406

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L EM + GI P+  TY  ++SG C+         L  KM D GC P  + +  L++
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CK+ ++DEAL +LRS ++ G  P    Y+ LID L +    D A   + +M E+ +  
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +V  +  +++GL +    + A +L+  MRE    PD    + L++    +G  D+
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 183/658 (27%), Positives = 291/658 (44%), Gaps = 64/658 (9%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++ L+  +  DL     D+L  G +  S VS   FVL + + K G+  KAL+    + E
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVME 245

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC--LPNIVTFSLLINGLSKSGKT 184
              +  +   N VL      Q+    +A     + L+C   PN+VTF  LING  K G+ 
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQI---EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM 302

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A  +   M QRGI P+   Y+ +I G  +       ++LF +    G   D V +++ 
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++ + K   +  A  + +     G  P + +Y+ LI GL +  R  EA+  Y ++ +  +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EP +V Y  +I G  + G ++    L  DM + G  PD   Y  L+ G    GL+  A  
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
             V++  +    N   F  LI G CR    D+A K+F  M   G  P V  F  ++    
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542

Query: 425 KAGELEKANLLFYKM-EIG------------------KNPTLFLR---LSQGGNRVHDKA 462
             G LE+A  LF++M ++G                    PT+ L+   L Q      D A
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++        I  A K    L E    PDI+TYN++I G+C +  ++ A ++F+ L
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           ++    P++VT   LI+ L + +  + A R+F  M + G  P+   Y  LM W      F
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW------F 716

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
           S +         DI G    S K  EE  +KG   + +                 Y+I +
Sbjct: 717 SKSV--------DIEG----SFKLFEEMQEKGISPSIVS----------------YSIII 748

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            GLC+ G+V EA NIF   ++ K +    +   LI G CK G L  A  ++ + L+NG
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 256/547 (46%), Gaps = 52/547 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI+G+ K G+ ++A + F  M++   +PD+  Y+ +++  F+  +  +   ++ + +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                 ++V FS  I+   KSG    A  +   M  +GI PN  TYTI+I GLCQ  R  
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA+ ++ ++   G  P  V Y++L++GFCK   +    AL     K G+ P +  Y  L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 281 DGLF-----------------------------------RAKRYDEAYAWYRKMFEEKIE 305
           DGL                                    R  R+DEA   +R M    I+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PDV  +  ++R     G++++A+ L   M + G+ PD   Y  LI  FC    +     L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH--MKPTIGL 586

Query: 366 QV-EIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           Q+ ++ +R+ +  +     ++I  + +   ++DA K FN + +    P +  +N +I G 
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           C    L++A  +F  +++    T F     G N V    +L  ++   C    +  A ++
Sbjct: 647 CSLRRLDEAERIFELLKV----TPF-----GPNTV----TLTILIHVLCKNNDMDGAIRM 693

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              +AE G+ P+ +TY  L++ F K  +I G+ KLF+E+Q KG+ P  V+Y  +I+GL +
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             R ++A  IF Q       P    Y  L+   C+  +   A  L+   LR+    DD  
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813

Query: 604 MKSIEEF 610
            +++ E+
Sbjct: 814 QRALSEY 820



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/485 (24%), Positives = 217/485 (44%), Gaps = 60/485 (12%)

Query: 56  KRKRLRSFASNSAVISMLLKP--------NGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           KR   +  + N    ++L+K           F +Y Q L   R    S+V+  +  LI G
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK--RGMEPSIVT--YSSLIDG 435

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + K G+       +  M +    PDV IY  +++   ++ L L A+    +M+  +   N
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           +V F+ LI+G  +  + + A+K+   M   GI P+  T+T V+       R +EA  LF 
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFF 555

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   G  PD +AY  L++ FCK  +    L L    +++     +   + +I  LF+  
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R ++A  ++  + E K+EPD+V Y  MI G     ++ +A ++   ++     P+T    
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI   C    +D A  +   + ++ S PN  T+  L+    ++  ++ + KLF +M++ 
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  PS+  ++ +IDGLCK G +++A  +F+                              
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFH------------------------------ 765

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
                             Q  ++  LPD++ Y  LI G+CKVG +  A  L++ +   G+
Sbjct: 766 ------------------QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807

Query: 528 RPDSV 532
           +PD +
Sbjct: 808 KPDDL 812



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 2/251 (0%)

Query: 21  ALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFD 80
            LEP    L+  T+     K   P +G + F    + K     A  + VI +L K +  +
Sbjct: 561 GLEP--DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
              +  + L  G +      +  +I GY  +   ++A   F  +K     P+      ++
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           ++  +      A+ ++  M +    PN VT+  L++  SKS   E + K+ +EM ++GI 
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+  +Y+I+I GLC+  R DEA  +F +  D+   PD VAY  L+ G+CK+ R+ EA  L
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798

Query: 261 LRSFEKDGFVP 271
                ++G  P
Sbjct: 799 YEHMLRNGVKP 809



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 173/424 (40%), Gaps = 49/424 (11%)

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM--EKAGCFPSVGMFNA--------- 418
           W   S  +   +TI    + RNGM D A K+F++M   +   F  +G             
Sbjct: 92  WAEISGKDPSFYTIAHV-LIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCK 150

Query: 419 -LIDGLCKAGELEKANLLF---------------YKM---EIGKN-----PTLFLRLSQG 454
            L++  C+ G ++KA  +F               Y+M    IG +        F +L +G
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G      ++   +++     G + KA      + E G    I++ N ++ G   V  I  
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEV 269

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +L   +   G  P+ VT+ TLING  +    + AF +F  M Q G  P    Y +L+ 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDF 633
              +     +   L+ Q L      D     S I+ +++ G++  A      M  +    
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVEC---KAIVTPPSCVKLIHGLCKRGYLDLAM 690
            +  YTI + GLCQDG++ EA  ++  +++     +IVT  S   LI G CK G L    
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS---LIDGFCKCGNLRSGF 446

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKS 750
            ++   +K G+   P V  Y +     SK    +HA     +M      L+  ++    S
Sbjct: 447 ALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF---NS 501

Query: 751 LLPG 754
           L+ G
Sbjct: 502 LIDG 505


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 278/558 (49%), Gaps = 30/558 (5%)

Query: 83  WQTLDEL----RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           W  +D L    RSG    V+  F  ++    + G+  +A + F  +++    P+  IYN 
Sbjct: 299 WVAIDWLHLMVRSGVEPSVA-TFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNT 357

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++  F+ +    A  +Y EM      P+ VTF++L+ G  K G+ E + ++L ++   G
Sbjct: 358 LMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  +   Y +++S LC   R DEA +L  ++ + G +   VA+N+L+  + +    D+A 
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAF 477

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
              R   + GF P   + + L+ GL R     EA     +M E+    + V Y V++ G 
Sbjct: 478 EAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGY 537

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +   ++ A  L  +M+ERGI PD   + ALI G    G +++A  + +E+     +PN 
Sbjct: 538 FKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNN 597

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  LI G+C  G V +A KL  +M + G       FN +IDG C+ G+++ A   F  
Sbjct: 598 FAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLD 657

Query: 439 ME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M+ IG  P +F              +   ++  YC A  +  A +I+ ++   G  PDI 
Sbjct: 658 MQRIGLLPDIF--------------TFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDIT 703

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN+ ++G+C++  +N A+ +  +L   G+ PD+VTY T+++G+   D  + A  +  ++
Sbjct: 704 TYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKL 762

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS-GRDDESMKSIEEF--LQKG 614
            + G  P+      L++  C++     A  +W Q LR+IS G D+ S + +++   L + 
Sbjct: 763 LKMGFIPNVITTNMLLSHFCKQGMPEKAL-IWGQKLREISFGFDEISYRILDQAYCLMQD 821

Query: 615 EVENAIQGLLE----MDF 628
           +VE  ++G  E    MDF
Sbjct: 822 DVE-LVRGTYEKHLFMDF 838



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 245/496 (49%), Gaps = 17/496 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S A+ + ++  L +        +  D ++   ++  + ++  L+ GY+K  +  +A   +
Sbjct: 316 SVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLY 375

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M+     PD   +N ++   ++      +  +  +++      +   + ++++ L  +
Sbjct: 376 EEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWA 435

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+ + A+K+L E+ ++G+  +   +  +I    +    D+A+  +  M   G +P     
Sbjct: 436 GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTC 495

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N+LL G C+   + EA  LL    + GF     +Y+ L+DG F+    + A   +++M E
Sbjct: 496 NSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKE 555

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I PD V +  +I GLS+AG V++A ++  +M   G VP+ + YN+LI+G CD G + +
Sbjct: 556 RGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTE 615

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L+ E+ ++  L +T TF I+I G CR G +  A + F  M++ G  P +  FN LI 
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CKA ++  A  +  KM   G +P              D  +  T +  YC    +++A
Sbjct: 676 GYCKAFDMVGAGEIVNKMYSCGLDP--------------DITTYNTYMHGYCRMRKMNQA 721

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             IL QL  +G +PD +TYN++++G C    ++ A+ L  +L   G  P+ +T   L++ 
Sbjct: 722 VIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSH 780

Query: 541 LQRVDREEDAFRIFGQ 556
             +    E A  I+GQ
Sbjct: 781 FCKQGMPEKAL-IWGQ 795



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 173/697 (24%), Positives = 300/697 (43%), Gaps = 63/697 (9%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKE 126
           V+S L+   G     + +D +   +    SD  V   L+ G+  VG   +ALE    M+ 
Sbjct: 146 VVSWLIARVGTGRTNKIVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRG 205

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P +     +L +  R   +     ++ +M+     P+ +TF+ +I G  +  +  V
Sbjct: 206 VGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVV 265

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +L  M +    P+  T+ I+I+  C   R   A      M  SG  P    +  +L+
Sbjct: 266 GESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILH 325

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+   V EA  L    +  G  P    Y+ L+DG F+A+   +A   Y +M    + P
Sbjct: 326 ALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSP 385

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V + +++ G  + G+++D+ +LL D+   G+  D+  Y+ ++   C  G LD+A  L 
Sbjct: 386 DCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLL 445

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ ++    +   F  LI    R G+ D A + +  M + G  PS    N+L+ GLC+ 
Sbjct: 446 QELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRK 505

Query: 427 GELEKANLLFYKM-EIG--KNPTLFLRLSQGGNRVH-------------------DKASL 464
           G L++A +L Y+M E G   N   +  L  G  +++                   D  + 
Sbjct: 506 GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAF 565

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             +++    AG + +AY++ ++++  G +P+   YNSLI G C  G +  ALKL KE++ 
Sbjct: 566 TALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQ 625

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KGL  D+ T+  +I+G  R  + + A   F  M + G  P    +  L+   C+      
Sbjct: 626 KGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCK------ 679

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ--GLLEMDFKLNDFQLAPYTIWL 642
           AF        D+ G               GE+ N +   GL        D  +  Y  ++
Sbjct: 680 AF--------DMVG--------------AGEIVNKMYSCGL--------DPDITTYNTYM 709

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            G C+  ++ +A+ I   L+    +    +   ++ G+C    LD AM +    LK GFI
Sbjct: 710 HGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFI 768

Query: 703 LRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
                 N LL         +K   +    R  S G+D
Sbjct: 769 PNVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFD 805



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 232/557 (41%), Gaps = 75/557 (13%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           DF   N LL GF  +    EAL +LR     G  P L S + L+  L R   Y   +  +
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           + M  +   P  + +  MI G     +V     LL  M +    PD   +N LI   C  
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G    A      + +    P+  TFT ++  +CR G V +A+KLF+ ++  G  P+  ++
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 417 NALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N L+DG  KA E+ +A+LL+ +M   G +P              D  +   +V  +   G
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSP--------------DCVTFNILVWGHYKYG 401

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I  + ++L  L  SG   D   Y+ +++  C  G ++ A+KL +EL  KGL    V + 
Sbjct: 402 RIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFN 461

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +LI    R   E+ AF  +  M + G TPS +   SL+   CR+         WLQ  R 
Sbjct: 462 SLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKG--------WLQEARI 513

Query: 596 ISGRDDES------------------MKSIE--EFLQK---------------------- 613
           +  R  E                   M ++E  +FL K                      
Sbjct: 514 LLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLS 573

Query: 614 --GEVENAIQGLLEMD---FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
             G VE A +  LEM    F  N+F    Y   + GLC  G+V EAL +   + +   + 
Sbjct: 574 KAGNVEEAYEVFLEMSAIGFVPNNF---AYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS 630

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              +   +I G C+RG +  A++ FL   + G  L P +  + +    + K    V A  
Sbjct: 631 DTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG--LLPDIFTFNILIGGYCKAFDMVGAGE 688

Query: 729 LLCRMKSVGYDLDACLY 745
           ++ +M S G D D   Y
Sbjct: 689 IVNKMYSCGLDPDITTY 705


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 188/760 (24%), Positives = 330/760 (43%), Gaps = 63/760 (8%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR-LRSFASNSAVISMLLKPNGFDLYWQTLD 87
           +S   V  V+    +P   F FF   A+  R + +  + + V+ ML      +      +
Sbjct: 87  MSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFN 146

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            ++   +    + +  +    Y  G   +A  +  KM++     + Y Y  ++++  +  
Sbjct: 147 LMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSG 206

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL VY  MV     P++ T+S L+  L K    E  + +L EM   G+ PN +T+T
Sbjct: 207 FCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFT 266

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I I  L +  + DEAY +  +M D+GC PD V Y  L++  C   +++ A  L    +  
Sbjct: 267 ICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKAS 326

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              P   +Y  L+D        D    ++ +M  +   PDVV + ++I  L + GKV +A
Sbjct: 327 SHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEA 386

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
              L  M+++G+ P+ + YN LI G   L  LD+A  L   +         +T+ + I  
Sbjct: 387 FGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDY 446

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
             ++G    A K F KM+  G  P++   NA +  L + G LE+A   F  + + G  P 
Sbjct: 447 YGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAP- 505

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        D  +   ++  Y  AG +  A K+L ++ E+G  P+++  NSLI+  
Sbjct: 506 -------------DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K   ++ A K+F+ ++   L P  VTY TL+ GL +  R ++A  +F  M  + C P+ 
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612

Query: 567 AVYKSLMTWSCRRRKFSLAFSLW------------LQYLRDISGRDDES----------- 603
             + +L+   C+  +  LA  +             L Y   I G   E+           
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672

Query: 604 MKSI------------EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW---LIGLCQD 648
           MK +               ++ G +E+A +   E    + D   A  + W   + G+  +
Sbjct: 673 MKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDH--ADGSFWEDLMGGILIE 730

Query: 649 GQVKEALNIFSVLVECKAIVTPPSC-VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            ++ +++ +F+  + C  I    S  + L+  LCK G    A +VFL  L   F + P +
Sbjct: 731 AEIGQSI-LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL-KLTKSFCITPSL 788

Query: 708 CNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             Y  L+  LL ++  +   A+ L  +MK+ G   D   Y
Sbjct: 789 EAYNSLIDGLLKARLTE--MAWGLFYKMKNAGCTPDVFTY 826



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 170/673 (25%), Positives = 292/673 (43%), Gaps = 67/673 (9%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F +LI    KVG  ++A  +   MK+    P+++ YN ++    R      AL ++  M
Sbjct: 369  TFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM 428

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
              L       T+ L I+   KSG++  AIK  ++M   GI+PN       +  L +  R 
Sbjct: 429  ESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRL 488

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +EA   F  +K  G +PD + YN L+  + K  RVD+A+ LL   E++G  P +   + L
Sbjct: 489  EEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSL 548

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            ID L++A R DEA+  +++M E K+ P VV Y  ++ GL + G+V++A  L   M     
Sbjct: 549  IDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDC 608

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P+T  +N L+   C  G +D A  +   + + +  P+  T+  +I G+ +   V+ A  
Sbjct: 609  PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFW 668

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA------------------------NLL 435
            LF++M+K   +P       L+ G+ K G +E A                          +
Sbjct: 669  LFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGI 727

Query: 436  FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-P 494
              + EIG++  LF           D + L  +V+  C  G    AY + ++L +S  + P
Sbjct: 728  LIEAEIGQS-ILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITP 786

Query: 495  DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
             +  YNSLI+G  K      A  LF +++  G  PD  TY   ++ L +  + ++ F ++
Sbjct: 787  SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLY 846

Query: 555  GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
             +M   GC P+   +  ++    +      A  L+                         
Sbjct: 847  EEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYY------------------------ 882

Query: 615  EVENAIQGLLEMDFKLNDFQLAPYTI--WLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
                        D    DF   P+T    + GL + G+++EA   F  +++   +   P 
Sbjct: 883  ------------DLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 673  CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
               L++G  K+G ++ A ++F   +K G  +RP + +Y +         K   A H    
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEG--IRPDLKSYSIMVDCLCMVGKVDDALHYFEE 988

Query: 733  MKSVGYDLDACLY 745
            +K  G D D   Y
Sbjct: 989  LKLSGLDPDLVCY 1001



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 289/631 (45%), Gaps = 54/631 (8%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + +I  LL+ N  D   +  + + S  +   +  + + I  Y K G+  KA+++F KMK 
Sbjct: 406  NTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKT 465

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P++   NA L     +     A   +  + K    P+ +T+++L+    K+G+ + 
Sbjct: 466  NGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDD 525

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            AIK+L EM + G  P       +I  L + +R DEA+++F +MK+   +P  V YN LL 
Sbjct: 526  AIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLA 585

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G  K  RV EA AL +    D   P   S++ L+D L +    D A     +M E    P
Sbjct: 586  GLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFP 645

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC------------ 354
            DV+ Y  +I GL +  +V  A  L   M+ + I PD      L+ G              
Sbjct: 646  DVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVA 704

Query: 355  -----------------DL--GLLDQARSLQVEIWKRDSLPNT-----HTFTILICGMCR 390
                             DL  G+L +A   Q  ++    + NT          L+  +C+
Sbjct: 705  KEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCK 764

Query: 391  NGMVDDAQKLFNKMEKAGCF-PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLF 448
            +G   DA  +F K+ K+ C  PS+  +N+LIDGL KA   E A  LFYKM+  G  P +F
Sbjct: 765  HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF 824

Query: 449  LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                          +    ++    +G I + + +  ++   G  P+ IT+N +I G  K
Sbjct: 825  --------------TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVK 870

Query: 509  VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              +++ A+ L+ +L      P   TYG LI+GL ++ R E+A + F +M   GC P+  +
Sbjct: 871  SNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930

Query: 569  YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMD 627
            Y  LM    ++     A  L+ + +++    D +S   + + L   G+V++A+    E+ 
Sbjct: 931  YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990

Query: 628  FKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                D  L  Y + + GL +  +V+EAL++F
Sbjct: 991  LSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 252/547 (46%), Gaps = 57/547 (10%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K +  D  W+    ++   ++     +  L++G  K G  ++A   F  M  
Sbjct: 546  NSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIA 605

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             DC P+   +N +L+   +     LAL + + M ++NC P+++T++ +I GL K  +   
Sbjct: 606  DDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNY 665

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK-MKDSGCSPDFVAYNALL 245
            A  +  +M ++ I P+  T   ++ G+ +  R ++A+R+  + +   G   D   +  L+
Sbjct: 666  AFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLM 724

Query: 246  NG-----------------------------------FCKLRRVDEA----LALLRSFEK 266
             G                                    CK  +  +A    L L +SF  
Sbjct: 725  GGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSF-- 782

Query: 267  DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
                P L +Y+ LIDGL +A+  + A+  + KM      PDV  Y + +  L ++GK+K+
Sbjct: 783  -CITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 327  AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
               L  +M  RG  P+T  +N +I G      LD+A  L  ++   D  P   T+  LI 
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 387  GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
            G+ + G +++A++ F +M   GC P+  ++N L++G  K G++E A              
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA------------CE 949

Query: 447  LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            LF R+ + G R  D  S   MV+  C  G +  A     +L  SG  PD++ YN +ING 
Sbjct: 950  LFRRMVKEGIR-PDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGL 1008

Query: 507  CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
             +   +  AL LF E++ +G+ PD  TY  LI  L      E+A +++ ++   G  P+ 
Sbjct: 1009 GRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNV 1068

Query: 567  AVYKSLM 573
              Y +L+
Sbjct: 1069 FTYNALI 1075



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 175/340 (51%)

Query: 80   DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
            D Y   L   +S  ++   + +  LI G  K    E A   F KMK   C PDV+ YN  
Sbjct: 770  DAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLF 829

Query: 140  LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
            L+   +         +Y EM+   C PN +T +++I GL KS   + AI +  ++     
Sbjct: 830  LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889

Query: 200  LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             P  +TY  +I GL ++ R +EA + F +M D GC P+   YN L+NGF K   V+ A  
Sbjct: 890  SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949

Query: 260  LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
            L R   K+G  P L SYS ++D L    + D+A  ++ ++    ++PD+V Y +MI GL 
Sbjct: 950  LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009

Query: 320  EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
             + +V++A+ L  +MR RGI PD Y YNALI      G++++A  +  E+  +   PN  
Sbjct: 1010 RSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069

Query: 380  TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            T+  LI G   +G  D A  ++ KM   GC P+ G F  L
Sbjct: 1070 TYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 234/514 (45%), Gaps = 53/514 (10%)

Query: 101  FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
            F  L+    K G+ + AL+   +M E +C PDV  YN V+    ++     A  ++++M 
Sbjct: 615  FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 161  KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR---------------GILPNK-- 203
            K+   P+ VT   L+ G+ K G+ E A ++  E                   GIL     
Sbjct: 675  KV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEI 733

Query: 204  -----FTYTIV--------------ISGLCQINRADEAYRLFLKMKDSGC-SPDFVAYNA 243
                 F  ++V              +  LC+  +A +AY +FLK+  S C +P   AYN+
Sbjct: 734  GQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNS 793

Query: 244  LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            L++G  K R  + A  L    +  G  P + +Y+  +D L ++ +  E +  Y +M    
Sbjct: 794  LIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG 853

Query: 304  IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             +P+ + + ++I GL ++  +  A+ L  D+      P  + Y  LI G   LG L++A+
Sbjct: 854  CKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAK 913

Query: 364  SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
                E+     +PN   + IL+ G  + G V+ A +LF +M K G  P +  ++ ++D L
Sbjct: 914  QFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCL 973

Query: 424  CKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            C  G+++ A   F ++++ G +P              D      M+     +  + +A  
Sbjct: 974  CMVGKVDDALHYFEELKLSGLDP--------------DLVCYNLMINGLGRSQRVEEALS 1019

Query: 483  ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            +  ++   G  PD+ TYN+LI      G +  A K+++ELQLKGL P+  TY  LI G  
Sbjct: 1020 LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHS 1079

Query: 543  RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
                 + A+ ++ +M   GC P+   +  L   S
Sbjct: 1080 MSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQS 1113



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 178/344 (51%), Gaps = 1/344 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            V   L+    K G    A   F K+ K F   P +  YN++++   + +L  +A  ++Y+
Sbjct: 754  VLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYK 813

Query: 159  MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            M    C P++ T++L ++ L KSGK +    + +EM  RG  PN  T+ IVI GL + N 
Sbjct: 814  MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873

Query: 219  ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             D+A  L+  +     SP    Y  L++G  KL R++EA          G +P    Y+ 
Sbjct: 874  LDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNI 933

Query: 279  LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
            L++G  +    + A   +R+M +E I PD+  Y +M+  L   GKV DA+    +++  G
Sbjct: 934  LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993

Query: 339  IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            + PD  CYN +I G      +++A SL  E+  R   P+ +T+  LI  +   GMV++A 
Sbjct: 994  LDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAG 1053

Query: 399  KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            K++ +++  G  P+V  +NALI G   +G  ++A  ++ KM +G
Sbjct: 1054 KMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 166/325 (51%), Gaps = 4/325 (1%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALE 119
            S  + +++I  LLK    ++ W    +++  N     DVF   + +    K G  ++  +
Sbjct: 787  SLEAYNSLIDGLLKARLTEMAWGLFYKMK--NAGCTPDVFTYNLFLDALGKSGKIKELFD 844

Query: 120  SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
             + +M    C+P+   +N V+    +      A+ +YY+++  +  P   T+  LI+GL 
Sbjct: 845  LYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLL 904

Query: 180  KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
            K G+ E A +  +EM   G +PN   Y I+++G  +    + A  LF +M   G  PD  
Sbjct: 905  KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964

Query: 240  AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            +Y+ +++  C + +VD+AL      +  G  P L  Y+ +I+GL R++R +EA + + +M
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 300  FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                I PD+  Y  +I  L  AG V++A K+  +++ +G+ P+ + YNALI+G    G  
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 360  DQARSLQVEIWKRDSLPNTHTFTIL 384
            D+A ++  ++      PNT TF  L
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQL 1109


>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial [Vitis vinifera]
 gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 283/651 (43%), Gaps = 110/651 (16%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +M++L C+PN  +F+ L+  +SKSG  ++    L EM   G  P+K+T T V+   C   
Sbjct: 190 KMMRL-CVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSR 248

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           + D+A  +F ++   G     V  + L+  F K   VD+A  L+   E  G      ++ 
Sbjct: 249 KFDKALSVFNEIYGRGWVDGHV-LSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFC 307

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI G  R  R D+A   ++KM +    PDV +Y  +I GL    +++ A+ LLS+M+E 
Sbjct: 308 VLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKEL 367

Query: 338 GIVPD--------TYC-------------------------YNALIKGFCDLGLLDQA-- 362
           GI PD         YC                         YN+++ G  +   +D+A  
Sbjct: 368 GIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYY 427

Query: 363 --RSLQVEIW------------KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
             R++  + +            K    P+T +F+I+I G+C  G +D A  LF  M + G
Sbjct: 428 LLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVG 487

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGG------------ 455
           C  +V ++N LID L  +  LE+  LL  +M+  G  PT F   S  G            
Sbjct: 488 CKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGAL 547

Query: 456 -----NRVHDKA----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                 RVH           +V+Q C      +A   L ++   G LPDI+ Y++ I+GF
Sbjct: 548 DMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGF 607

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            K+  ++ AL++F+++  +G  PD V Y TLING  +V R  +A  I  +M   G  PS 
Sbjct: 608 VKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSV 667

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
             Y  L+   C+                                   G+++ A   L  M
Sbjct: 668 VTYNLLIDGWCK----------------------------------NGDIDQAFHCLSRM 693

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
             K  +  +  YT  + GLC  G+  +A+++++ +          S + LIHGLCK G+ 
Sbjct: 694 VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWP 753

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           D A+   LY  + G    P    Y+     F  +     A+ +L  M + G
Sbjct: 754 DAAL---LYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKG 801



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 179/373 (47%), Gaps = 14/373 (3%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           +PD   ++ V++         LAL+++ +MV++ C  N++ ++ LI+ LS S + E    
Sbjct: 454 RPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYL 513

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +L EM   G  P +FT+  +   LC+      A  +  +M+  G  P    Y  L+   C
Sbjct: 514 LLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLC 573

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K +R  EA   L    ++GF+P + +YS  IDG  + K  D+A   +R +      PDVV
Sbjct: 574 KRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVV 633

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I G  +  +V +A  +L +M  +G+VP    YN LI G+C  G +DQA      +
Sbjct: 634 AYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRM 693

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             ++  PN  T+T LI G+C  G  DDA  L+N+M   GC P+   F ALI GLCK G  
Sbjct: 694 VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWP 753

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           + A L F +M              G     D      ++  + +      A++IL ++  
Sbjct: 754 DAALLYFREM--------------GERETPDTIVYVALITSFISNKNPTLAFEILKEMVA 799

Query: 490 SGNLPDIITYNSL 502
            G  PD +  N L
Sbjct: 800 KGKFPDPLDKNDL 812



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 231/536 (43%), Gaps = 63/536 (11%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D  ++ ++ +    + +    F VLI G+ +    +KAL+ F KM++    PDV +Y+A+
Sbjct: 285 DKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDAL 344

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI------------------------ 175
           +     K+    AL +  EM +L   P+I   S LI                        
Sbjct: 345 IGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEA 404

Query: 176 ---------NGLSKSGKTEVAIKMLDEMT----------------QRGILPNKFTYTIVI 210
                    NGL      + A  +L  MT                +  + P+  +++IVI
Sbjct: 405 MLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVI 464

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            GLC   + D A  LF  M   GC  + + YN L++      R++E   LL+  +  GF 
Sbjct: 465 DGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFR 524

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +++ +   L R +    A    R+M     EP +  Y ++++ L +  +  +A   
Sbjct: 525 PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNF 584

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L++M   G +PD   Y+A I GF  +  +DQA  +  +I  R   P+   +  LI G C+
Sbjct: 585 LAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCK 644

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
              V +A  + ++M   G  PSV  +N LIDG CK G++++A     +M           
Sbjct: 645 VKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRM----------- 693

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
              G  R  +  +  T+++  C AG    A  +  ++   G  P+ I++ +LI+G CK G
Sbjct: 694 --VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCG 751

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
             + AL  F+E+  +   PD++ Y  LI           AF I  +M   G  P P
Sbjct: 752 WPDAALLYFREMGERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDP 806



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 40/222 (18%)

Query: 523 QLKGLR---PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           Q+K +R   P+S ++  L+  + +    +       +M  +G  P      S++   C  
Sbjct: 188 QVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNS 247

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
           RKF  A S++     +I GR              G V+  +  +L + F           
Sbjct: 248 RKFDKALSVF----NEIYGR--------------GWVDGHVLSILVLTFS---------- 279

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
                  + G+V +A  +   + +    +   +   LIHG  ++  +D A+ +F    K+
Sbjct: 280 -------KCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKS 332

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           GF     V + L+  L   K+ +K  A HLL  MK +G D D
Sbjct: 333 GFAPDVSVYDALIGGLCAKKEIEK--ALHLLSEMKELGIDPD 372


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 225/462 (48%), Gaps = 30/462 (6%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI------------ 199
           A +++  +++ N  P  + F+ ++  L KS      + +  +M   GI            
Sbjct: 60  AFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQ 119

Query: 200 ----LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
                PN  T+T +I GLC   +  +A      +   G   D V Y  L++G CK+    
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            AL LLR  + +   P +  YS +IDG+ + K  ++A+  Y +M  + I P+VV Y  +I
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G    G++KDA+ L + M    I PD Y +N L+ GFC  G + + +++   + K+   
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN  T+  L+ G C    V+ A+ +   M + G  P +  +N LIDG CK  ++++A  L
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F +M                + + D  +  ++++  C  G I  A K++ ++ + G  PD
Sbjct: 360 FKEM-------------HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           IITY+S+++  CK   ++ A+ L  +L+ +G+RP+  TY  LI+GL +  R EDA  IF 
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
            +   G   +   Y  ++   C +  F  A +L L  ++D S
Sbjct: 467 DLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL-LSKMKDNS 507



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 204/408 (50%), Gaps = 13/408 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN +TF+ LI GL   G+   A+   D +   G   ++  Y  +I GLC++     A  L
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             ++  +   P+ V Y+ +++G CK + V++A  L       G  P + +YS LI G F 
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  +A   + KM  E I+PDV  + +++ G  + GK+K+   + + M ++GI P+   
Sbjct: 245 VGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVT 304

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y +L+ G+C +  +++A+S+   + +R   P+  ++ ILI G C+   VD+A  LF +M 
Sbjct: 305 YCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMH 364

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
                P V  +N+LIDGLCK G++  A  L  +M     P              D  +  
Sbjct: 365 HKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPP-------------DIITYS 411

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++++  C    + KA  +L +L + G  P++ TY  LI+G CK G +  A  +F++L +K
Sbjct: 412 SILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 471

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           G      TY  +I+G       ++A  +  +M  N C P    Y+ ++
Sbjct: 472 GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIII 519



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 190/337 (56%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  KVG+   AL+   ++     QP+V +Y+ +++   + +    A  +Y EMV   
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 227

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN+VT+S LI+G    G+ + AI + ++M    I P+ +T+ I++ G C+  +  E  
Sbjct: 228 ISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 287

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +F  M   G  P+ V Y +L++G+C ++ V++A ++L +  + G  P + SY+ LIDG 
Sbjct: 288 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGF 347

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K+ DEA   +++M  + I PDVV Y  +I GL + GK+  A+KL+ +M +RG+ PD 
Sbjct: 348 CKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y++++   C    +D+A +L  ++  +   PN +T+TILI G+C+ G ++DA  +F  
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFED 467

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +   G   +V  +  +I G C  G  ++A  L  KM+
Sbjct: 468 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 240/539 (44%), Gaps = 65/539 (12%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N   Y+ + +     N   +A+ LF ++     +P  + +N +L    K +     L+L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 262 RSFEKDG----------------FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +  E +G                + P   +++ LI GL    +  +A  ++  +     +
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            D V YG +I GL + G+ + A+ LL  +    + P+   Y+ +I G C    ++ A  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+  +   PN  T++ LI G    G + DA  LFNKM      P V  FN L+DG CK
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 426 AGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G++++   +F   M+ G  P +    S              +++ YC    ++KA  IL
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCS--------------LMDGYCLVKEVNKAKSIL 325

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             +++ G  PDI +YN LI+GFCK+  ++ A+ LFKE+  K + PD VTY +LI+GL ++
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +   A ++  +M   G  P    Y S++   C+  +   A +L L  L+D         
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL-LTKLKD--------- 435

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
                           QG+           +  YTI + GLC+ G++++A NIF  L+  
Sbjct: 436 ----------------QGIRP--------NMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 471

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              +T  +   +IHG C +G  D A+ +      N  I        ++RSL    +N K
Sbjct: 472 GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK 530



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 205/403 (50%), Gaps = 15/403 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  +  +V +    + V +  LI+GL K G+T  A+ +L  +    + PN   Y+ +I 
Sbjct: 146 ALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIID 205

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G+C+    ++A+ L+ +M   G SP+ V Y+AL++GF  + ++ +A+ L      +   P
Sbjct: 206 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKP 265

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ L+DG  +  +  E    +  M ++ I+P+VV Y  ++ G     +V  A  +L
Sbjct: 266 DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSIL 325

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M +RG+ PD   YN LI GFC +  +D+A +L  E+  +  +P+  T+  LI G+C+ 
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKL 385

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G +  A KL ++M   G  P +  +++++D LCK  +++KA  L  K+ + G  P ++  
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY-- 443

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       +   +++  C  G +  A+ I   L   G    + TY  +I+GFC  G
Sbjct: 444 ------------TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
             + AL L  +++     PD+VTY  +I  L   D  + A ++
Sbjct: 492 LFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 183/353 (51%), Gaps = 3/353 (0%)

Query: 86  LDELR--SGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           LD LR   GN+   + V +  +I G  K      A + + +M      P+V  Y+A+++ 
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F       A+ ++ +M+  N  P++ TF++L++G  K GK +    +   M ++GI PN
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  ++ G C +   ++A  +   M   G +PD  +YN L++GFCK+++VDEA+ L +
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                  +P + +Y+ LIDGL +  +   A     +M +  + PD++ Y  ++  L +  
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +V  A+ LL+ ++++GI P+ Y Y  LI G C  G L+ A ++  ++  +      +T+T
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           ++I G C  G+ D+A  L +KM+   C P    +  +I  L    E +KA  L
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 162/330 (49%), Gaps = 39/330 (11%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           + FDLY + + +  S NV   S     LISG++ VG  + A++ F KM   + +PDVY +
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYS----ALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 270

Query: 137 NAVLN-------IAFRKQLFLL----------------------------ALAVYYEMVK 161
           N +++       +   K +F +                            A ++ Y M +
Sbjct: 271 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 330

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P+I ++++LI+G  K  K + A+ +  EM  + I+P+  TY  +I GLC++ +   
Sbjct: 331 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISY 390

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A +L  +M D G  PD + Y+++L+  CK  +VD+A+ALL   +  G  P + +Y+ LID
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +  R ++A+  +  +  +     V  Y VMI G    G   +A+ LLS M++   +P
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           D   Y  +I+   D    D+A  L+  I +
Sbjct: 511 DAVTYEIIIRSLFDKDENDKAEKLREMITR 540



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S+++  L K +  D     L +L+   +      + +LI G  K G  E A   F  +  
Sbjct: 411 SSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                 V  Y  +++    K LF  ALA+  +M   +C+P+ VT+ ++I  L    + + 
Sbjct: 471 KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK 530

Query: 187 AIKMLDEMTQRGIL 200
           A K L EM  RG+L
Sbjct: 531 AEK-LREMITRGLL 543


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 232/476 (48%), Gaps = 13/476 (2%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           + + A+  F  M      P  + +N +L      + +  A+++Y +M      P+  T +
Sbjct: 38  NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           ++IN     G+  +A   + ++ + G  PN  T   ++ GLC   +  EA R   K+   
Sbjct: 98  IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ 157

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G     ++Y  L+NG CK+     A+ LLR  E+    P +  YS +ID L +    DEA
Sbjct: 158 GFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           Y  Y +M  + I PDVV Y +++ G    G++  A+ LL++M    I PD Y Y  L+  
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G + +A ++   + K     +   ++ L+ G C    V++A+++F  M + G  P 
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           V  ++ +I+GLCK   +++A  LF ++                N V D  +  ++++  C
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEI-------------HQKNMVPDTVTYTSLIDCLC 384

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            +G I   + +  ++ + G  PD+ITYN+LI+  CK G+++ A+ LF +++ + +RP+  
Sbjct: 385 KSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVY 444

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           T+  L++GL +V R ++A   F  +   G   +   Y  ++   C+      A +L
Sbjct: 445 TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALAL 500



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 232/481 (48%), Gaps = 50/481 (10%)

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT------ 170
           A+  + +M+  + +PD +  N ++N        +LA +   +++KL   PN +T      
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 171 -----------------------------FSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                                        + +LING+ K G+T  AI++L  + +  I P
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N   Y+++I  LC+    DEAY L+ +M   G SPD V Y+ L++GFC + +++ A+ LL
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
                +   P + +Y+ L+D L +  +  EA      M +  +  DVV+Y  ++ G    
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            +V +A ++   M + G+ PD +CY+ +I G C +  +D+A +L  EI +++ +P+T T+
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
           T LI  +C++G +     LF++M   G  P V  +N LID LCK G L++A  LF KM +
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
               P ++              +   +++  C  G +  A +    L   G   ++ TY 
Sbjct: 437 QAIRPNVY--------------TFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +ING CK G ++ AL L   ++  G   D+VT+  +I      D  + A ++  +M   
Sbjct: 483 VMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542

Query: 561 G 561
           G
Sbjct: 543 G 543



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 188/338 (55%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+G  K+G+   A+    +++ +  +P+V IY+ +++   +  L   A  +Y EMV  
Sbjct: 168 ILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK 227

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT+S+L++G    G+   AI +L+EM    I P+ +TYTI++  LC+  +  EA
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +   M  +  + D V Y+ L++G+C +  V+ A  +  +  + G  P +  YS +I+G
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + KR DEA   + ++ ++ + PD V Y  +I  L ++G++     L  +M +RG  PD
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI   C  G LD+A +L  ++  +   PN +TFTIL+ G+C+ G + +A + F 
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQ 467

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            +   G   +V  +  +I+GLCK G L++A  L  +ME
Sbjct: 468 DLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRME 505



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 252/560 (45%), Gaps = 51/560 (9%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           LPN+   S  +  L+ +     A+   + M      P+ F +  ++  L  + R   A  
Sbjct: 22  LPNLCFHSHSLPPLTHNADD--AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAIS 79

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L+ +M+ S   PD+   N ++N FC   +V  A + +    K G+ P   + + L+ GL 
Sbjct: 80  LYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLC 139

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
              +  EA  ++ K+  +      + YG++I G+ + G+ + A++LL  +    I P+  
Sbjct: 140 LEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVV 199

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y+ +I   C   L+D+A  L  E+  +   P+  T++IL+ G C  G ++ A  L N+M
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
                 P +  +  L+D LCK G++++A N+L   ++   N               D   
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL--------------DVVV 305

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             T+++ YC    ++ A ++   + + G  PD+  Y+ +ING CK+  ++ AL LF+E+ 
Sbjct: 306 YSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIH 365

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            K + PD+VTY +LI+ L +  R    + +F +M   G  P    Y +L+   C+     
Sbjct: 366 QKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLD 425

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            A +L+       +   D++++                             +  +TI L 
Sbjct: 426 RAIALF-------NKMKDQAIRP---------------------------NVYTFTILLD 451

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GLC+ G++K AL  F  L+     +   +   +I+GLCK G LD A+ +      NG I 
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511

Query: 704 RPRVCNYLLRSLLFSKDNKK 723
                  ++R+     +N K
Sbjct: 512 DAVTFEIMIRAFFDKDENDK 531



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I+ L K    D      +E+   N+   +  +  LI    K G      + F +M +
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  YN +++   +      A+A++ +M      PN+ TF++L++GL K G+ + 
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKN 461

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++   ++  +G   N  TYT++I+GLC+    DEA  L  +M+D+GC  D V +  ++ 
Sbjct: 462 ALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIR 521

Query: 247 GFCKLRRVDEALALLRSFEKDGFV 270
            F      D+A  L+R     G +
Sbjct: 522 AFFDKDENDKAEKLVREMIARGLL 545


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 220/453 (48%), Gaps = 23/453 (5%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD+ I+N++L    R         ++  M   +  P++VT+ +L+NGL KSG    A+K+
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 191 LDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFL--KMKD-SGCSPDFVAYNALL 245
           LD M+  G  + P+      V+ GLC+I R  +A  +F+  +M+   GC+P+ V YN L 
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLA 247

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR--KMFEEK 303
           + FC++  +  A  ++   EK+G  P + + + +I GL R  R   A  ++R  +    +
Sbjct: 248 DAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
              + V Y  +         V  AM+L  +M + G  PD   Y  +I G    G L  A 
Sbjct: 308 ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDAC 367

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +    + K     +   + ILI G CR   + +A +L  +M+  G  P V  +N L+ GL
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427

Query: 424 CKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CKAG+    + LL + ++ G  P++               +  T+V  YC AG   +A +
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQPSVV--------------TFGTLVHGYCKAGKTDEALR 473

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           I   + E+   P+ + YN+LI+  CK   ++ A+KLF E++ K +  +  TY  L+ GLQ
Sbjct: 474 IFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQ 533

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
                E AF +  +M +  CTP+      LM W
Sbjct: 534 DKKMAEKAFELMDRMREERCTPNYVTVDVLMEW 566



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 198/433 (45%), Gaps = 27/433 (6%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I  F+ L+  L ++G      ++   M    + P+  TY I+++GLC+     +A ++
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 226 FLKMKDSGCS--PDFVAYNALLNGFCKLRRVDEALALL--RSFEKDGFVPRLGSYSCLID 281
             +M   G    PD    N +++G CK+ R+ +A+  +  R     G  P   +Y+CL D
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR-----E 336
              R      A     +M +E + P+V+    +I GL   G+V  A++   + R      
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEA 308

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG   +   Y+ L   F     +D A  L  E+      P+   +  +I G+ + G + D
Sbjct: 309 RG---NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLD 365

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGG 455
           A      M+KAG       +N LI G C+  +L +A  L  +M+ +G  P ++       
Sbjct: 366 ACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVY------- 418

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                  +  T++   C AG      ++L  + + G  P ++T+ +L++G+CK G  + A
Sbjct: 419 -------TYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEA 471

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L++F+ +    ++P++V Y TLI+ L +    + A ++F +M +     +   Y +L+  
Sbjct: 472 LRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKG 531

Query: 576 SCRRRKFSLAFSL 588
              ++    AF L
Sbjct: 532 LQDKKMAEKAFEL 544



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 177/398 (44%), Gaps = 64/398 (16%)

Query: 256 EALALLR-SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           EA   LR S       P +  ++ L+  L RA         +  M +  ++PDVV YG++
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 315 IRGLSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           + GL ++G V DA+K+L  M   G  + PD    N ++ G C +G L QA     E  + 
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232

Query: 373 --DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL- 429
                PN  T+  L    CR G +  A K+  +MEK G  P+V   N +I GLC+ G + 
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 430 ------------------------------------EKANLLFYKM-EIGKNP------T 446
                                               + A  LF++M + G  P      T
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352

Query: 447 LFLRLSQGGNRVH---------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           +   L+Q G  +                D  +   ++  +C    +H+AY++L ++   G
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD+ TYN+L++G CK G+ +   +L   +   G +P  VT+GTL++G  +  + ++A 
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           RIF  M +    P+  +Y +L+ + C+ R+  +A  L+
Sbjct: 473 RIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLF 510



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 158/332 (47%), Gaps = 6/332 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L   + +VGD   A +   +M++    P+V   N ++    R      AL  + E  K  
Sbjct: 246 LADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRT 303

Query: 164 CLP----NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             P    N VT+S L +        ++A+++  EM   G  P+   Y  +ISGL Q  R 
Sbjct: 304 VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRL 363

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A      MK +G   D  AYN L+ GFC+ +++ EA  LL   +  G  P + +Y+ L
Sbjct: 364 LDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTL 423

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL +A  +         M ++  +P VV +G ++ G  +AGK  +A+++   M E  I
Sbjct: 424 LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+T  YN LI   C    +D A  L  E+ +++   N  T+  L+ G+    M + A +
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFE 543

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           L ++M +  C P+    + L++ L + GE E+
Sbjct: 544 LMDRMREERCTPNYVTVDVLMEWLPEIGETER 575



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 204/475 (42%), Gaps = 67/475 (14%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VPDTYCYNALIKGFCDLGLLDQARS 364
           P  +L   ++R  S      +A   L D    G   PD   +N+L+      G L     
Sbjct: 96  PSALLLSKLVRRFSSPA---EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTE 152

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG--CFPSVGMFNALIDG 422
           L   +      P+  T+ IL+ G+C++G V DA K+ ++M   G    P + + N ++DG
Sbjct: 153 LFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDG 212

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           LCK G L++A +   +           R+        +  +   + + +C  G I  A K
Sbjct: 213 LCKIGRLQQAIIFVDE-----------RMRHVHGCAPNAVTYNCLADAFCRVGDIGMACK 261

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVG-------------------------------- 510
           I+ ++ + G  P++IT N++I G C+VG                                
Sbjct: 262 IVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASA 321

Query: 511 -----NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
                N++ A++LF E+   G RPD+V Y T+I+GL +  R  DA      M + G    
Sbjct: 322 FLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLD 381

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE-SMKSIEEFLQKGEVENAIQGLL 624
              Y  L+   CR++K   A+ L L+ ++ +  + D  +  ++   L K    +A+  LL
Sbjct: 382 AKAYNILIGGFCRKKKLHEAYEL-LEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELL 440

Query: 625 EMDFKLNDF---QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHG 679
                ++D     +  +   + G C+ G+  EAL IF  + E +  + P + +   LI  
Sbjct: 441 --GHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR--IQPNTVIYNTLIDF 496

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
           LCK   +D+A+ +F    +          N LL+ L   K  +K  A+ L+ RM+
Sbjct: 497 LCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEK--AFELMDRMR 549



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 3/278 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L S +    + + A+E F +M +   +PD  +Y  +++   +    L A      M
Sbjct: 314 TYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASM 373

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K     +   +++LI G  +  K   A ++L+EM   G+ P+ +TY  ++SGLC+    
Sbjct: 374 KKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDF 433

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                L   M D GC P  V +  L++G+CK  + DEAL + RS ++    P    Y+ L
Sbjct: 434 SAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTL 493

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID L +++  D A   + +M E+ +  +V  Y  +++GL +    + A +L+  MRE   
Sbjct: 494 IDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERC 553

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            P+    + L++   ++G   +   L+  + +RD   N
Sbjct: 554 TPNYVTVDVLMEWLPEIG---ETERLKCFMQQRDQKDN 588



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)

Query: 52  IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           +W   R    ++   S + S  L  N  D+  +   E+        + ++F +ISG  + 
Sbjct: 304 VWPEARGNAVTY---STLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQA 360

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G    A  +   MK+   + D   YN ++    RK+    A  +  EM  +   P++ T+
Sbjct: 361 GRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTY 420

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + L++GL K+G      ++L  M   G  P+  T+  ++ G C+  + DEA R+F  M +
Sbjct: 421 NTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDE 480

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           +   P+ V YN L++  CK R VD A+ L     +      + +Y+ L+ GL   K  ++
Sbjct: 481 ARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEK 540

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           A+    +M EE+  P+ V   V++  L E G+ +
Sbjct: 541 AFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 273/591 (46%), Gaps = 51/591 (8%)

Query: 84  QTLDELRS----GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           +T D +R+    GN + V D +  +++GY +VG  E A      +      P+ Y Y  V
Sbjct: 67  RTADAVRALDAAGNAAGVVD-YNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPV 122

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +     +     ALAV  EM   +C+P    + ++I    +SG    A+++L+ +  +G 
Sbjct: 123 VRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGS 182

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
             +     +VI+ +C     DE   +  K+   GC  D V+YNA+L G C  +       
Sbjct: 183 TLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAK------- 235

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
                       R G    L+D + +       +    +M +    PD+ +Y  +I G+ 
Sbjct: 236 ------------RWGDVEELMDEMVK------VHEALSQMAQHGCTPDIRMYATIIDGIC 277

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           + G  + A ++LS M   G+ P+  CYN ++KG C     ++A  L  E+++++   +  
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           TF IL+   C+NG+VD   +L  +M + GC P V  +  +I+G CK G +++A +L   M
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397

Query: 440 -EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
              G  P                 S   +++  C+      A +++ ++ + G LP+ +T
Sbjct: 398 PSCGCKPNTI--------------SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           +N++IN  CK G +  A++L K++ + G  PD ++Y T+I+GL +  + E+A  +   M 
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEV 616
             G TP+   Y S+     R  +      ++   ++D + R D  + +  I    ++ E 
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMF-DNIQDATIRSDAVLYNAVISSLCKRRET 562

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           + AI  L  M         + YT  + GL  +G + EA ++ S L   +A+
Sbjct: 563 DLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAV 613



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 249/556 (44%), Gaps = 30/556 (5%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            S LI  L  +G+T  A++ LD     G       Y  +++G C++ + + A RL   + 
Sbjct: 55  LSALIRSLCVAGRTADAVRALD---AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                P+   Y  ++ G C   R+ +ALA+L        VP    Y  +I+   R+  Y 
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A      +  +    D     ++I  + + G V + +++L  +   G   D   YNA++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 351 KGFCDLGLLDQARSLQVEIWK----------RDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           KG C          L  E+ K              P+   +  +I G+C+ G  + A ++
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            ++M   G  P+V  +N ++ G+C A   EKA  L  +M     P              D
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL-------------D 335

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   +V+ +C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G I+ A+ L K
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G +P++++Y  ++ GL   +R  DA  +  +M Q GC P+P  + +++ + C++ 
Sbjct: 396 NMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKG 455

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYT 639
               A  L  Q L +    D  S  ++ + L K G+ E A++ L  M  K     +  Y+
Sbjct: 456 LVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYS 515

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
                L ++G++ + + +F  + +            +I  LCKR   DLA+D   Y + N
Sbjct: 516 SMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSN 575

Query: 700 GFILRPRVCNYLLRSL 715
           G +        L++ L
Sbjct: 576 GCMPNESTYTALIKGL 591



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 214/464 (46%), Gaps = 23/464 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I    +  G+    + L+ L +   ++ +    ++I+     G  ++ LE   K+  F 
Sbjct: 157 IIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFG 216

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN----------CLPNIVTFSLLINGL 178
           C+ D+  YNAVL      + +     +  EMVK++          C P+I  ++ +I+G+
Sbjct: 217 CEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGI 276

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            K G  EVA ++L  M   G+ PN   Y  V+ G+C  +R ++A  L  +M    C  D 
Sbjct: 277 CKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDD 336

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V +N L++ FC+   VD  + LL    + G +P + +Y+ +I+G  +    DEA    + 
Sbjct: 337 VTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKN 396

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M     +P+ + Y ++++GL    +  DA +L+S M ++G +P+   +N +I   C  GL
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++QA  L  ++      P+  +++ +I G+ + G  ++A +L N M   G  P+V  +++
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +   L + G ++K   +F  +             Q      D      ++   C      
Sbjct: 517 MAFALAREGRIDKVIQMFDNI-------------QDATIRSDAVLYNAVISSLCKRRETD 563

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            A   L  +  +G +P+  TY +LI G    G +  A  L  EL
Sbjct: 564 LAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 163/702 (23%), Positives = 302/702 (43%), Gaps = 88/702 (12%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKPN 77
           E  L  LL  L+   V +V+    + ++   FF WA ++ R R  A     ++ +L K  
Sbjct: 152 EENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTR 211

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  +    +    + F  ++  Y + G    AL     M++   +PD+ I N
Sbjct: 212 LCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICN 271

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             + +                                   L K  K E A++ L+ M   
Sbjct: 272 TAIYV-----------------------------------LVKGNKLEKALRFLERMKVA 296

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI P+  +Y  +I G C ++R D+A  L  +M   GC PD V+Y  ++   CK R+V+E 
Sbjct: 297 GIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEV 356

Query: 258 LALLRSF-EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
             L+ +  +    +P   +Y+ LI  L +    D+A  + R+  E+    D V Y  ++ 
Sbjct: 357 KRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVD 416

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
              +   +  A  L+ DM  +G  PD   Y A+I GFC +G +D+A+ +  +++K    P
Sbjct: 417 SFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKP 476

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           NT T+T+L+ G+C NG   +A+++ N  E+    P+   ++A++ GL + G+L +A  L 
Sbjct: 477 NTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLT 536

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M E G  P              +   +  +++  C    +  A K L +    G   +
Sbjct: 537 REMIEKGFLP--------------NPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVN 582

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ + S+I GFC++G+++ AL + +++ L    PD++TY TL + L +  R ++A  +  
Sbjct: 583 VVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIV 642

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M   G  P+P  Y++++   C+          W        GR D+ MK +E+ + +  
Sbjct: 643 KMLGKGIDPTPVTYRAVIHRFCQ----------W--------GRVDDMMKLLEKMIARQP 684

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            +     ++E                   LC  G  +EA  +   ++   + +   +C  
Sbjct: 685 FKTVYNQVIE------------------KLCYFGNREEAEKLLGKVLRTASKLDAKTCHI 726

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           LI      G    A  V     +   I   ++C  + + L+ 
Sbjct: 727 LIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVL 768



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 33/273 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G  + G   +A +   +M E    P+    N ++    R Q  + A     E 
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   C  N+V F+ +I G  + G  + A+ ML++M      P+  TYT +   L + +R 
Sbjct: 575 LHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRL 634

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS--------------FE 265
           DEA  L +KM   G  P  V Y A+++ FC+  RVD+ + LL                 E
Sbjct: 635 DEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIE 694

Query: 266 KDGF-----------------VPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           K  +                   +L + +C  LI+          AY    +MF   + P
Sbjct: 695 KLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIP 754

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           D+ L   + + L   G   +A  L+    ERGI
Sbjct: 755 DLKLCEKVTKKLVLDGMPAEADDLMLRFVERGI 787


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 228/455 (50%), Gaps = 28/455 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           DV+ +N++L  A  +   +  +A  Y +++   +  P++VT+ +L+NGL K+G+   A++
Sbjct: 135 DVFAFNSIL-AALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALR 193

Query: 190 MLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS--GCSPDFVAYNALL 245
           +LD M+++   I P+  T   V+ GLC+  R  EA     +   S  GC P+ V YN L+
Sbjct: 194 VLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLI 253

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + FC++  +  A  L+   E +G    + + + ++ GL RA R   A  ++R+  +  + 
Sbjct: 254 DAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVW 311

Query: 306 PD----VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           P+     V Y  ++  L     V  AM+L  +    G  PD   Y  +I G    G L+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+   + +     +T  + ILI G CR   + +A +L  +M++ G  P V  +N L+ 
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CKAG+    + L  KM + G  P++               +  T+V  YC  G I +A
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVI--------------TFGTLVHGYCKVGKIDEA 477

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            +IL  + ESG  P+ + YN+LI+  CK G+++ A++LF E++ K +  +  T+  L+ G
Sbjct: 478 LRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L+  +  E AF +  QM +  C P       LM W
Sbjct: 538 LRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEW 572



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 188/386 (48%), Gaps = 37/386 (9%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAW 295
           D  A+N++L    ++R V     +    +    V P + +Y  L++GL +A R  +A   
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 296 YRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE--RGIVPDTYCYNALIK 351
              M  +   I PDVV    ++ GL ++G+V++A+  +        G  P+T  YN LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            FC +G +  A  L VE  + + +P N  T   ++ G+CR G    A + F   EK   +
Sbjct: 255 AFCRVGNISMAYEL-VEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR--EKRTVW 311

Query: 411 P----SVGMFNALIDGLCKAGELEKANLLFY-KMEIGKNP------TLFLRLSQGGNRVH 459
           P    +   ++ L+  L     +  A  LF+ KM  G +P      T+   L+Q G R+ 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAG-RLE 370

Query: 460 DKASLQT----------------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           D  S+ +                ++  +C    +H+AY++L ++ E G  PD+ TYN+L+
Sbjct: 371 DACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLL 430

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CK G+     +L  ++   G +P  +T+GTL++G  +V + ++A RI   M ++G  
Sbjct: 431 SGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIH 490

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLW 589
           P+  +Y +L+ + C+R    LA  L+
Sbjct: 491 PNNVIYNTLIDFLCKRGDVDLAIELF 516



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFGKMKE---FDCQPDVYIYNA 138
           + LD +   ++ +  DV  +  ++ G  K G  ++AL +F + +      C P+   YN 
Sbjct: 193 RVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL-AFVEQRMSSVHGCPPNTVTYNC 251

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   R     +A  +  +M       NIVT + ++ GL ++G+T  A++   E  +R 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRT 309

Query: 199 ILP----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           + P    N  TY+ ++  L   N    A  LF +    G SPD + Y  +++G  +  R+
Sbjct: 310 VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           ++A ++  S ++ GF     +Y+ LI G  R KR  EAY   ++M E  I PDV  Y  +
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           + G  +AG      +LL  M + G  P    +  L+ G+C +G +D+A  +   + +   
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PN   +  LI  +C+ G VD A +LF++M++     +V  FNAL+ GL      EKA  
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFE 549

Query: 435 LFYKM 439
           L  +M
Sbjct: 550 LMDQM 554



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 159/328 (48%), Gaps = 6/328 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI  + +VG+   A E   KM+      ++   N ++    R      AL  + E 
Sbjct: 248 TYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE- 306

Query: 160 VKLNCLP----NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            K    P    N VT+S L+  L  +    +A+++  E    G  P+   Y  +ISGL Q
Sbjct: 307 -KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             R ++A  +   MK++G   D  AYN L+ GFC+ +R+ EA  LL+  ++ G  P + +
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCT 425

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ L+ G  +A  +        KM ++  +P V+ +G ++ G  + GK+ +A+++L  M 
Sbjct: 426 YNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E GI P+   YN LI   C  G +D A  L  E+ ++    N  TF  L+ G+    M +
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            A +L ++M +  CFP     + L++ L
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLMEWL 573



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 39/444 (8%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           DV  +  ++  L+    V    ++ + M+    + PD   Y  L+ G C  G +  A  +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 366 QVEIWKRD--SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA--GCFPSVGMFNALID 421
              + ++D    P+  T   ++ G+C++G V +A     +   +  GC P+   +N LID
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
             C+ G +  A  L  KME    P              +  +L T+V   C AG    A 
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVP-------------QNIVTLNTIVGGLCRAGRTGAAL 301

Query: 482 KILMQLAE-----SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +   +         GN    +TY++L+       N+  A++LF E   +G  PD++ Y T
Sbjct: 302 EFFREKRTVWPEGKGN---AVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFT 358

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           +I+GL +  R EDA  +   M + G       Y  L+   CR+++   A+ L LQ ++++
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYEL-LQEMKEV 417

Query: 597 SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVK 652
             R D  + +    L           + E+  K+ D    P  I     + G C+ G++ 
Sbjct: 418 GIRPD--VCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKID 475

Query: 653 EALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           EAL I   + E    + P + +   LI  LCKRG +DLA+++F    +          N 
Sbjct: 476 EALRILRSMDESG--IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMK 734
           LL+ L     N    A+ L+ +M+
Sbjct: 534 LLKGL--RDKNMPEKAFELMDQMR 555



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 33  TVTSVIMKTKNPQVGFRFF-----IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           T+   + +         FF     +W   +    ++   S ++  LL  N   +  +   
Sbjct: 286 TIVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTY---STLVGALLHTNNVGMAMELFH 342

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E  S   S  + ++F +ISG  + G  E A      MKE   + D   YN ++    RK+
Sbjct: 343 EKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKK 402

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  EM ++   P++ T++ L++G  K+G      ++L +M   G  P+  T+ 
Sbjct: 403 RLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFG 462

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            ++ G C++ + DEA R+   M +SG  P+ V YN L++  CK   VD A+ L    ++ 
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
                + +++ L+ GL      ++A+    +M EE+  PD V   V++  L
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWL 573


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 249/533 (46%), Gaps = 16/533 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + +AVI   ++   F    +  DE+    V V   V   LI GY   GD   AL  F
Sbjct: 291 SEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLF 350

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            ++ E    P+V I++ ++    +      A  +Y  M  +   P +   + L+ G  K 
Sbjct: 351 DEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQ 410

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
              E A  +LD   + GI  +  TY IV+  LC++ + +EA  L+ KM   G +P  V+Y
Sbjct: 411 NLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSY 469

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N ++ G CK   +D+A  ++    + G  P   +Y+ L++G F+    + A+  + +M  
Sbjct: 470 NHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVA 529

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             I P    +  +I GL + G+V +A   L+   ++  +P +  YN +I G+   G +D 
Sbjct: 530 AGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDS 589

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A S+  E+ + +  PN  T+T LI G C++  +D A K+ + M++ G    + ++  LI 
Sbjct: 590 AESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIA 649

Query: 422 GLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G CK  ++E A   F K +E+G  P   +                 M+  Y     +  A
Sbjct: 650 GFCKMQDMENACKFFSKLLEVGLTPNTIV--------------YNIMISAYRNLNNMEAA 695

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  ++  +    D+  Y SLI+G  K G ++ AL L+ E+  +G+ PD   Y  LING
Sbjct: 696 LNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLING 755

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           L    + E+A +I  +M  N  TP+  +Y +L+    +      AF L  + L
Sbjct: 756 LCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 236/491 (48%), Gaps = 51/491 (10%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+    V+    +F VLI    K+G+ EKA E + +MK    QP V+I N +L   FR
Sbjct: 350 FDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLK-GFR 408

Query: 146 KQLFL--------------LALAVYYEMVKL---------------------NCLPNIVT 170
           KQ  L              +A  V Y +V L                        P++V+
Sbjct: 409 KQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVS 468

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ +I G  K G  + A ++++ + + G+ PN  TYTI++ G  +    + A+ +F +M 
Sbjct: 469 YNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMV 528

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
            +G  P    +N+++NG CK+ RV EA   L +F K  F+P   +Y+C+IDG  +    D
Sbjct: 529 AAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAID 588

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A + YR+M   +I P+V+ Y  +I G  ++ K+  A+K+  DM+ +G+  D   Y  LI
Sbjct: 589 SAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLI 648

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            GFC +  ++ A     ++ +    PNT  + I+I        ++ A  L  +M      
Sbjct: 649 AGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIP 708

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             + ++ +LIDGL K G+L  A  L+ +M   G  P +F+                 ++ 
Sbjct: 709 CDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFM--------------YNVLIN 754

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G +  A KIL ++  +   P ++ YN+LI G  K GN+  A +L  E+  KGL P
Sbjct: 755 GLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVP 814

Query: 530 DSVTYGTLING 540
           D  TY  L+NG
Sbjct: 815 DDTTYDILVNG 825



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 275/638 (43%), Gaps = 54/638 (8%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           VL++   +    E A   F +M E     D Y    ++    +   F+ A   + +    
Sbjct: 192 VLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGR 251

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               +  ++S++I  + +    ++A K+++   + G +P++ TY  VI    ++    EA
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA 311

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RL  +M DS    +     +L+ G+C    V+ AL L     + G  P +  +S LI+ 
Sbjct: 312 LRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEW 371

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEP----------------------------------DV 308
             +    ++A   Y +M    ++P                                   V
Sbjct: 372 CSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASV 431

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y +++  L E GKV +A  L   M  +GI P    YN +I G C  G +D A  +   
Sbjct: 432 VTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNG 491

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I +    PN  T+TIL+ G  + G  + A  +F++M  AG  P+   FN++I+GLCK G 
Sbjct: 492 IIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGR 551

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           + +A               F++ S     +    +   +++ Y   G I  A  +  ++ 
Sbjct: 552 VSEAR---------DKLNTFIKQS----FIPTSMTYNCIIDGYVKEGAIDSAESVYREMC 598

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
            S   P++ITY SLINGFCK   ++ ALK+  +++ KGL  D   Y TLI G  ++   E
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDME 658

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-I 607
           +A + F ++ + G TP+  VY  +++          A +L  + + +    D +   S I
Sbjct: 659 NACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLI 718

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
           +  L++G++  A+    EM  +     +  Y + + GLC  GQ++   N   +L E    
Sbjct: 719 DGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLE---NAGKILKEMDGN 775

Query: 668 VTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
              P+ +    LI G  K G L  A  +    L  G +
Sbjct: 776 NITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLV 813



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 13/282 (4%)

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G ++ D      ++  Y  A  I +A +    + E G +P +   N L+    +   +  
Sbjct: 146 GFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVED 205

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +LF E+  + +  D  T   L+    +  +  +A R FGQ    G     A Y  ++ 
Sbjct: 206 AHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQ 265

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
             CR     LA  L ++   ++     E   +  I   ++ G    A++   EM      
Sbjct: 266 AVCRGSDLDLASKL-VEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVP 324

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAM 690
             +A  T  + G C  G V  AL +F  +VE    VTP   +   LI    K G ++ A 
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG--VTPNVAIFSVLIEWCSKIGNVEKAN 382

Query: 691 DVFLYTLKNGFILRPRV--CNYLLRSLLFSKDNKKVHAYHLL 730
           +  LYT      L+P V   N+LL+   F K N   +AY LL
Sbjct: 383 E--LYTRMKCMGLQPTVFILNFLLKG--FRKQNLLENAYLLL 420


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 296/671 (44%), Gaps = 69/671 (10%)

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNI---AFRKQLFLLALAVYYEMVKLNCLPNI 168
           G   +A  +  KM E     + Y YN ++++    F  +    AL VY  M+     P++
Sbjct: 180 GGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNE----ALKVYKRMISEGMKPSM 235

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T+S L+  L + G T   + +L+EM   G+ PN +TYTI I  L +  R D+A+ +F +
Sbjct: 236 KTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M D GC PD + Y  L++  C   ++D+A  L          P   +Y  L+D   +   
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +    ++ +M  +   PDVV Y ++I  L ++G V  A  +L  M  +GI P+ + YN 
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G      LD+A  L   +      P   ++ + I    ++G    A   F  M+K G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             PS+   NA +  L + G + +A  +F  + + G +P              D  +   +
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP--------------DSVTYNML 521

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ Y  AG I KA ++L ++   G  PD++  NSLIN   K G ++ A K+F  L+   L
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P  VTY  L+ GL +  +   A  +FG M ++GC P+   + SL+    +     LA  
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641

Query: 588 LW------------LQYLRDI-----SGRDD------ESMKS------------IEEFLQ 612
           ++            L Y   I      GR D        MK             I   ++
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVR 701

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIW---LIGLCQDGQVKEALNIFSVLVECKAIVT 669
            G VE+AI+  + M+F            W   +  +  + +++EA++   +LV C ++  
Sbjct: 702 HGRVEDAIK--VVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV-CNSVCQ 758

Query: 670 PPSC-VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHA 726
                + LI  LCKR     A +VF    KN   + P + +Y  L+  LL S   +K  A
Sbjct: 759 DDHVMLPLIKVLCKRKKALDAQNVFDKFTKN-LGIHPTLESYNCLMDGLLGSNFTEK--A 815

Query: 727 YHLLCRMKSVG 737
             L   MKS G
Sbjct: 816 LELFEDMKSAG 826



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 165/632 (26%), Positives = 281/632 (44%), Gaps = 54/632 (8%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            + +I  LLK    D   + L+ + S  V   +  + + I  Y K GD  KA+++F  MK+
Sbjct: 414  NTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKK 473

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P +   NA L           A  ++ ++ K    P+ VT+++L+   SK+G+ + 
Sbjct: 474  RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK 533

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++L EM  +G  P+      +I+ L +  R D A+++F ++K+   +P  V YN LL 
Sbjct: 534  ATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLT 593

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            G  K  ++ +AL L  S  + G  P   +++ L+D L +    D A   + +M      P
Sbjct: 594  GLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNP 653

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            DV+ Y  +I GL   G++  A      M+ + + PD      LI G    G ++ A  + 
Sbjct: 654  DVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712

Query: 367  VEIWKRDSLPNTHTF---------------------TILICG---------------MCR 390
            +E   +  L     F                      IL+C                +C+
Sbjct: 713  MEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCK 772

Query: 391  NGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLF 448
                 DAQ +F+K  K  G  P++  +N L+DGL  +   EKA  LF  M+  G +P  F
Sbjct: 773  RKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNF 832

Query: 449  LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                          +   +++ +  +  I+K Y +  ++   G  P+ IT+N +I+   K
Sbjct: 833  --------------TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVK 878

Query: 509  VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              N+N AL L+ EL      P   TYG LI+GL +  R E A +IF +M   GC P+  +
Sbjct: 879  SNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938

Query: 569  YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMD 627
            Y  L+    +  +   A  L+ + +++    D +S   + E L   G ++ A+Q   E+ 
Sbjct: 939  YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998

Query: 628  FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                D     Y   + GL +  ++ EAL++FS
Sbjct: 999  LTGLDPDTVSYNFIINGLGKSRRLDEALSLFS 1030



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 258/557 (46%), Gaps = 37/557 (6%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT----IVISGLCQINRADEA 222
           N+ T+  +   LS  G    A   L +MT+ G + N ++Y     +++ G C     +EA
Sbjct: 165 NLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFC-----NEA 219

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +++ +M   G  P    Y+AL+    +     + + LL   +  G  P + +Y+  I  
Sbjct: 220 LKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA 279

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L RA+R D+A+  +++M +E   PDV+ Y V+I  L  AGK+  A +L   MR     PD
Sbjct: 280 LGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPD 339

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  L+  F  +G L+  +    E+      P+  T+TILI  +C++G VD A  + +
Sbjct: 340 RVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLD 399

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL------SQGG 455
            M   G FP++  +N +I GL KA  L++A  L   ME +G  PT F  +       + G
Sbjct: 400 VMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSG 459

Query: 456 NRVHDKASLQTMVEQ-------YCTA--------GLIHKAYKILMQLAESGNLPDIITYN 500
           +      + +TM ++        C A        G I +A  I   L + G  PD +TYN
Sbjct: 460 DPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYN 519

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            L+  + K G I+ A +L  E+  KG  PD +   +LIN L +  R + A+++FG++   
Sbjct: 520 MLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNL 579

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENA 619
              P+   Y  L+T   +  K   A  L+          +  +  S+ + L K + V+ A
Sbjct: 580 KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLA 639

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLI 677
           ++    M     +  +  Y   + GL ++G++  A   F    + K  ++P   +   LI
Sbjct: 640 LKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFH---QMKKFLSPDYVTLCTLI 696

Query: 678 HGLCKRGYLDLAMDVFL 694
            G+ + G ++ A+ V +
Sbjct: 697 PGVVRHGRVEDAIKVVM 713



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 248/578 (42%), Gaps = 86/578 (14%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I+ L K    D  W+    L++  ++     + +L++G  K G   KALE FG M E
Sbjct: 554  NSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE 613

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC---------------------- 164
              C P+   +N++L+   +     LAL ++  M  +NC                      
Sbjct: 614  SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673

Query: 165  ------------LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK--------- 203
                         P+ VT   LI G+ + G+ E AIK++ E   +  L            
Sbjct: 674  AFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733

Query: 204  -------------FTYTIVISGLCQIN--------------RADEAYRLFLKM-KDSGCS 235
                         F   +V + +CQ +              +A +A  +F K  K+ G  
Sbjct: 734  CILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIH 793

Query: 236  PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            P   +YN L++G       ++AL L    +  G  P   +Y+ L+D   ++KR ++ Y  
Sbjct: 794  PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDL 853

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            Y +M     EP+ + + ++I  L ++  +  A+ L  ++      P    Y  LI G   
Sbjct: 854  YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
             G  +QA  +  E+      PN+  + ILI G  ++G +D A +LF KM K G  P +  
Sbjct: 914  AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973

Query: 416  FNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L++ LC  G +++A   F ++++ G +P              D  S   ++     +
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDP--------------DTVSYNFIINGLGKS 1019

Query: 475  GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
              + +A  +  ++   G  PD+ TYN+LI      G ++ A+K+++ELQL GL P   TY
Sbjct: 1020 RRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTY 1079

Query: 535  GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              LI G      ++ AF +F +M   GC+P+   +  L
Sbjct: 1080 NALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 219/494 (44%), Gaps = 51/494 (10%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           I  L +    D  W    E+           + VLI      G  +KA E + KM+    
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYY-EMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            PD   Y  +++  F K   L  +  ++ EM      P++VT+++LI  L KSG  + A 
Sbjct: 337 SPDRVTYITLMD-KFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            MLD MT +GI PN  TY  +I GL +  R DEA  L   M+  G  P   +Y   ++ +
Sbjct: 396 DMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYY 455

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K     +A+    + +K G +P + + +  +  L    R  EA   +  + +  + PD 
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDS 515

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y ++++  S+AG++  A +LLS+M  +G  PD    N+LI      G +D A  +   
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      P   T+ IL+ G+ + G +  A +LF  M ++GC P+   FN+L+D L K   
Sbjct: 576 LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA 635

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++ A  +F +M                          TM+   C                
Sbjct: 636 VDLALKMFCRM--------------------------TMMN--CN--------------- 652

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
                PD++TYN++I G  + G I+ A   F +++ K L PD VT  TLI G+ R  R E
Sbjct: 653 -----PDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVE 706

Query: 549 DAFRIFGQMPQNGC 562
           DA ++  +     C
Sbjct: 707 DAIKVVMEFVHQAC 720



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 162/313 (51%)

Query: 115  EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            EKALE F  MK     P+ + YN +L+   + +       +Y EM    C PN +T +++
Sbjct: 813  EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 175  INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
            I+ L KS     A+ +  E+      P   TY  +I GL +  R+++A ++F +M D GC
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 235  SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             P+ V YN L+NGF K   +D A  L +   K+G  P L SY+ L++ L    R DEA  
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 295  WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            ++ ++    ++PD V Y  +I GL ++ ++ +A+ L S+M+ RGI PD Y YNALI    
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLG 1052

Query: 355  DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
              G +D A  +  E+      P+  T+  LI G   +G  D A  +F KM   GC P+  
Sbjct: 1053 IAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTE 1112

Query: 415  MFNALIDGLCKAG 427
             F  L +   +AG
Sbjct: 1113 TFAQLPNKYPRAG 1125



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 168/689 (24%), Positives = 294/689 (42%), Gaps = 40/689 (5%)

Query: 88   ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            ++R+ + S     +  L+  + KVGD E     + +M+     PDV  Y  ++    +  
Sbjct: 330  KMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSG 389

Query: 148  LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                A  +   M      PN+ T++ +I GL K+ + + A+++L+ M   G+ P  F+Y 
Sbjct: 390  DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449

Query: 208  IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            + I    +     +A   F  MK  G  P   A NA L    +  R+ EA  +     K 
Sbjct: 450  LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            G  P   +Y+ L+    +A + D+A     +M  +  EPDV++   +I  L +AG+V  A
Sbjct: 510  GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             K+   ++   + P    YN L+ G    G + +A  L   + +    PNT TF  L+  
Sbjct: 570  WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP-- 445
            + +N  VD A K+F +M    C P V  +N +I GL + G ++ A   F++M+   +P  
Sbjct: 630  LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDY 689

Query: 446  ----TLFLRLSQGGNRVHDKAS-LQTMVEQYCTA------GLIHKAYKILMQLAESGNLP 494
                TL   + + G RV D    +   V Q C        G + +      ++ E+ +  
Sbjct: 690  VTLCTLIPGVVRHG-RVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFA 748

Query: 495  DIITYNS----------LINGFCKVGNINGALKLFKELQLK-GLRPDSVTYGTLINGLQR 543
            +I+  NS          LI   CK      A  +F +     G+ P   +Y  L++GL  
Sbjct: 749  EILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLG 808

Query: 544  VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             +  E A  +F  M   G  P+   Y  L+    + ++ +  + L+     ++  R  E 
Sbjct: 809  SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLY----SEMRSRGCEP 864

Query: 604  MKSIEEFLQKGEVE-NAIQGLLEMDFKL--NDFQLAP--YTIWLIGLCQDGQVKEALNIF 658
                   +    V+ N +   L++ ++L   DF   P  Y   + GL + G+ ++A+ IF
Sbjct: 865  NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924

Query: 659  SVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
              +++      P S +   LI+G  K G +D A ++F   +K G  +RP + +Y +    
Sbjct: 925  EEMLDYGC--GPNSVIYNILINGFGKSGEIDFACELFKKMVKEG--IRPDLKSYTILVEC 980

Query: 717  FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                 +   A      +K  G D D   Y
Sbjct: 981  LCITGRIDEAVQYFEELKLTGLDPDTVSY 1009



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 169/335 (50%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            +  S + ++  LL  N  +   +  ++++S      +  + +L+  + K     K  + +
Sbjct: 795  TLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLY 854

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             +M+   C+P+   +N +++   +      AL +YYE++  +  P   T+  LI+GL K+
Sbjct: 855  SEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKA 914

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            G++E A+K+ +EM   G  PN   Y I+I+G  +    D A  LF KM   G  PD  +Y
Sbjct: 915  GRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSY 974

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
              L+   C   R+DEA+      +  G  P   SY+ +I+GL +++R DEA + + +M  
Sbjct: 975  TILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKN 1034

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
              I PD+  Y  +I  L  AGKV  A+K+  +++  G+ P  + YNALI+G    G  DQ
Sbjct: 1035 RGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQ 1094

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            A S+  ++      PNT TF  L     R G+V +
Sbjct: 1095 AFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 184/380 (48%), Gaps = 16/380 (4%)

Query: 174  LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            LI  L K  K   A  + D+ T+  GI P   +Y  ++ GL   N  ++A  LF  MK +
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 233  GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            G  P+   YN LL+   K +R+++   L       G  P   +++ +I  L ++   ++A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 293  YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               Y ++      P    YG +I GL +AG+ + AMK+  +M + G  P++  YN LI G
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 353  FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            F   G +D A  L  ++ K    P+  ++TIL+  +C  G +D+A + F +++  G  P 
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005

Query: 413  VGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
               +N +I+GL K+  L++A  LF +M+  G +P L+              +   ++   
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY--------------TYNALILHL 1051

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
              AG +  A K+  +L   G  P + TYN+LI G    GN + A  +FK++ + G  P++
Sbjct: 1052 GIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNT 1111

Query: 532  VTYGTLINGLQRVDREEDAF 551
             T+  L N   R     + F
Sbjct: 1112 ETFAQLPNKYPRAGLVHNPF 1131


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 288/626 (46%), Gaps = 23/626 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V   +  + VL+ G  K    ++A+E    M       D   Y  ++    R + 
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
             +AL + ++M++L  +P+    S +I+ L K    E A  +  ++   G++PN F Y  
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I  LC+  R D+A RLF +M   G  P+ V Y  L++  CK   +++AL L       G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               +  Y+ LI+G  +    D A      M +E + P    Y  +I GL   G +   M
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L  +M ERGI  + Y + ALI GFC    +D+A  L  ++   + +PN  TF ++I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +  A +L+++M + G  P    + +LI GLC    + KAN     +E        
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-------- 575

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    V +  SL  ++  +   G   + Y +  ++A  G   D++++  ++    K
Sbjct: 576 -----NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             +   +  LF+E++ +G++PD + Y  +I+ L + +    A   + QM  +G +P+   
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           +  L+   C+      A  L  + L      +  +    ++ F  +G++E A + L    
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAM 749

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRG 684
            + +   +  + I + GLC+ G+++EA+++ S + E       P C+    +IH LCK G
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG---FSPDCISYSTIIHELCKMG 806

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++ A +++   L  G  L+P V  Y
Sbjct: 807 DINKAFELWNEMLYKG--LKPDVVAY 830



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 232/489 (47%), Gaps = 14/489 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D++R   + V    +  LI+GY K G  ++A      M +    P    Y+ ++    R
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  + ++ EM +     N  TF+ LING  K  K + A ++ D+M    ++PN+ T
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + ++I G C +    +A++L+ +M + G  PD   Y +L++G C    V +A   +   E
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               V    S + L+ G FR  R+ E Y  + +M    ++ D+V + +++    +    +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +  L  +M+E+G+ PD   Y  +I        + QA +   ++      PNT T T+LI
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C++G +  A+ L  +M      P+   +N  +D     G++EKA  L   M  G   
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               S   +++  C AG I +A  ++ ++ ESG  PD I+Y+++I+ 
Sbjct: 756 SI--------------VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 801

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK+G+IN A +L+ E+  KGL+PD V Y   I         + A  I+  M ++G  P+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 566 PAVYKSLMT 574
              Y++L++
Sbjct: 862 WDTYRALLS 870



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 258/609 (42%), Gaps = 54/609 (8%)

Query: 93  NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           N+ V +D   +  L+ G+ ++ + E AL     M      P     + +++   +K+L  
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A ++  ++  L  +PN+  ++ LI+ L K+ + + A ++  EM  RG+ PN+ TY I+I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC+    ++A  LF KM+D G       YN+L+NG+CK   +D A  LL    K+G  
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 271 PRLGSYSCLIDGLFRA-----------------------------------KRYDEAYAW 295
           P   SYS LI GL R                                    K+ DEA   
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + KM +  + P+ V + VMI G    G ++ A +L   M E G+ PD Y Y +LI G C 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A     ++    ++ N  + T L+ G  R G   +   L+++M   G    +  
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F  ++    K  + EK+ +LF +M E G  P              D      M++     
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKP--------------DDIFYTCMIDALSKE 666

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A     Q+   G  P+ +T+  LIN  CK G +  A  L KE+    + P+  TY
Sbjct: 667 ENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTY 726

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
              ++        E A  +   M Q G   S   +  L+   C+  K   A  L  +   
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 785

Query: 595 DISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                D  S  +I  E  + G++  A +   EM +K     +  Y I++      G+  +
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 654 ALNIFSVLV 662
           AL I++ ++
Sbjct: 846 ALGIYTNMI 854



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 240/552 (43%), Gaps = 89/552 (16%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I  L K   FD   +   E+    +      + +LI    K G  E AL  F 
Sbjct: 339 FAYN-ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM++   +  VY YN+++N   ++     A  +   MVK    P   ++S LI GL ++G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                +++  EM +RGI  N +T+T +I+G C+  + DEA RLF KM DS   P+ V +N
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL------------------- 283
            ++ G+C +  + +A  L     + G  P   +Y  LI GL                   
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENS 577

Query: 284 ----------------FRAKRYDEAYA-W------------------------------- 295
                           FR  R+ E Y  W                               
Sbjct: 578 YAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637

Query: 296 ---YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R+M E+ ++PD + Y  MI  LS+   +  A+     M   G  P+T  +  LI  
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G L  A  L  E+   + LPN  T+   +      G ++ A+ L + M + G   S
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +  FN LI GLCKAG++++A  L  K+ E G +P              D  S  T++ + 
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP--------------DCISYSTIIHEL 802

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV-GNINGALKLFKELQLKGLRPD 530
           C  G I+KA+++  ++   G  PD++ YN  I  +C V G  + AL ++  +   G++P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 531 SVTYGTLINGLQ 542
             TY  L++G+ 
Sbjct: 862 WDTYRALLSGIS 873



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 15/412 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  T S ++  L K  +  +A  + D+M Q G+  +++ YT  I   C+    D A  L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           ++M+  G     V YN L+ G CK  RV EA+ +       G      +Y  L+ G  R 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +  + A      M      P       MI  L +   V++A  L   + + G+VP+ + Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NALI   C     D A  L  E+  R   PN  T+ ILI  +C+ GM++DA  LF+KM  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G   +V  +N+LI+G CK G L++A  L   M + G  PT               AS  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT--------------AASYS 447

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++   C  G +    ++  ++AE G   +  T+ +LINGFCK   ++ A +LF ++   
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + P+ VT+  +I G   V     AF+++ QM + G  P    Y+SL++  C
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 214/466 (45%), Gaps = 22/466 (4%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  N++T + ++  L +I +   A  LF KM  SG   D   Y A +  +C+ R +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   E +G       Y+ L+ GL +  R  EA      M    +  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +++ A+++  DM   G VP     + +I       L+++A SL  ++     +PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  LI  +C+N   DDA +LF +M   G  P+   +  LI  LCK G +E A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           KM + G   T++                 +++  YC  G + +A  +L  + + G  P  
Sbjct: 398 KMRDKGIKVTVY--------------PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            +Y+ LI G C+ G+++  ++L +E+  +G+  ++ T+  LING  +  + ++A R+F +
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGE 615
           M  +   P+   +  ++   C       AF L+ Q +      D+ + +S I        
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563

Query: 616 VENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           V  A + + +++     LN+F L   T  L G  ++G+  E  +++
Sbjct: 564 VSKANEFVADLENSYAVLNNFSL---TALLYGFFREGRFTETYHLW 606



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 69/295 (23%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S +A++    +   F   +   DE+    V +    F +++    K  D EK+   F +M
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           KE   +PD   Y  +++   +++  + AL  + +MV     PN VT ++LIN L KSG  
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 185 EVAIKMLDEMTQRGILPNKFTYT----------------------------------IVI 210
             A  +  EM    +LPNKFTY                                   I+I
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILI 764

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV---------------- 254
            GLC+  +  EA  L  K+ +SG SPD ++Y+ +++  CK+  +                
Sbjct: 765 KGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 824

Query: 255 -------------------DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                              D+AL +  +  + G  P   +Y  L+ G+     YD
Sbjct: 825 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/586 (26%), Positives = 267/586 (45%), Gaps = 28/586 (4%)

Query: 14  TVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL-RSFASNSAVISM 72
           T TP      P L   +   +  +I+  K+     + F WA+K      S ++  A+I  
Sbjct: 3   TTTPT-----PSLAVPTHERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHK 57

Query: 73  LLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           LL    F      LDE+ +S  +     +F  +I G  +       ++    +  +   P
Sbjct: 58  LLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNP 117

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
            + I+N++L++  ++ + L       +M+      +  T+ +L+ GL  + +     K+L
Sbjct: 118 SLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLL 177

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             +  RG+ PN   Y  ++  LC   +   A  L  ++K+    P+ V +N L+ G+CK 
Sbjct: 178 QVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKE 233

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
               +AL LL      GFVP + + + +++ L    R  EA     ++  +    DVV +
Sbjct: 234 DNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAH 293

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
             +I+G  + GKVK    LL +M  +G +P+   YNALI GFC+ G+L+ A  +  ++  
Sbjct: 294 NTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKT 353

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME--KAGCFPSVGMFNALIDGLCKAGEL 429
                N  TF  LI G+   G  +D  K+   ME  +  C  S+  +N+++ GL +   L
Sbjct: 354 DGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNML 413

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            +A     KME      LF R      R+            +C  G I +A ++  Q+  
Sbjct: 414 NEALEFLMKME-----NLFPRAVDRSLRILG----------FCEEGAIQEAKRVYDQMNN 458

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G +P  + Y+ LI+GFC+ G +  AL+L  E+   G  P + T+  LI+G  R+ ++  
Sbjct: 459 EGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGS 518

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           A ++   M   GC P    Y  L+   CR++ F  A SL LQ + +
Sbjct: 519 ALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVEN 564



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 233/493 (47%), Gaps = 27/493 (5%)

Query: 200 LPN----KFTYTIVISGLCQINRADEAYRLFLKMKDS-GCSPDFVAYNALLNGFCKLRRV 254
           LPN    + TY  +I  L    R      L  +M  S G  PD   +  ++ G  + R +
Sbjct: 41  LPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMI 100

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK-MFEEKIEPDVVLYGV 313
            + + +L    + G  P L  ++ ++D L + +  D A  +YRK M    I+ D   YG+
Sbjct: 101 RDVIKVLDLVTRYGKNPSLKIFNSILDVLVK-EDIDLARKFYRKKMMGAGIQGDDYTYGI 159

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +++GL    ++ +  KLL  ++ RG+ P+   YN L+   C+ G + +ARSL  EI +  
Sbjct: 160 LMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE-- 217

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  TF +LICG C+      A  L  K    G  P V     +++ LC  G + +A 
Sbjct: 218 --PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAV 275

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +  ++E           S+GG  V D  +  T+++ +C  G +   + +L ++   G L
Sbjct: 276 EILERVE-----------SKGG--VVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCL 322

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P+  TYN+LI+GFC+ G +  AL +F +++  G+  + VT+ TLI GL    R ED F+I
Sbjct: 323 PNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKI 382

Query: 554 FGQMPQNG--CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
              M +    C  S + Y S++    R+   + A    ++         D S++ I  F 
Sbjct: 383 LELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLR-ILGFC 441

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           ++G ++ A +   +M+ +        Y   + G CQ+G V+EAL + + +V         
Sbjct: 442 EEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVAS 501

Query: 672 SCVKLIHGLCKRG 684
           +   LI G C+ G
Sbjct: 502 TFNALISGFCRLG 514



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 23/423 (5%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           +K    +P+V IYN +L+          A ++  E+ +    PN VTF++LI G  K   
Sbjct: 180 IKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNVLICGYCKEDN 235

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
              A+ +L++    G +P+  T T V+  LC + R  EA  +  +++  G   D VA+N 
Sbjct: 236 FVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNT 295

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ GFCK  +V     LL+  E+ G +P   +Y+ LI G   +   + A   +  M  + 
Sbjct: 296 LIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDG 355

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE-RGIVPDTYC-YNALIKGFCDLGLLDQ 361
           I  + V +  +I+GL   G+ +D  K+L  M E RG+   +   YN+++ G     +L++
Sbjct: 356 INCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNE 415

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L+  +   +  P     ++ I G C  G + +A++++++M   G  PS  +++ LI 
Sbjct: 416 A--LEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIH 473

Query: 422 GLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           G C+ G + +A  L  +M  +G  P                ++   ++  +C  G    A
Sbjct: 474 GFCQEGCVREALELMNEMVFLGYFPV--------------ASTFNALISGFCRLGKDGSA 519

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+L  +   G +PD  +Y+ LI+  C+  +   A  L  ++   G+ PD + + +L + 
Sbjct: 520 LKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHC 579

Query: 541 LQR 543
           L +
Sbjct: 580 LSQ 582



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 130/308 (42%), Gaps = 16/308 (5%)

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D++   T++     A +I    K+L  +   G  P +  +NS+++   K  +I+ A K +
Sbjct: 83  DESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVK-EDIDLARKFY 141

Query: 520 -KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            K++   G++ D  TYG L+ GL   +R  + F++   +   G  P+  +Y +L+   C 
Sbjct: 142 RKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCN 201

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL--LEMDFKLNDF-QL 635
             K   A SL    + +I   +D +   +       + +N +Q L  LE  F L     +
Sbjct: 202 NGKVGRARSL----MNEIKEPNDVTFNVL--ICGYCKEDNFVQALVLLEKSFSLGFVPDV 255

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
              T  +  LC  G+V EA+ I   +     +V   +   LI G CK G + L   +   
Sbjct: 256 VTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKE 315

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGP 755
             + G +      N L+    F +      A  +   MK+ G +   C +    +L+ G 
Sbjct: 316 MERKGCLPNADTYNALISG--FCESGMLESALDMFNDMKTDGIN---CNFVTFDTLIKGL 370

Query: 756 WNTREMEN 763
           ++    E+
Sbjct: 371 FSRGRTED 378


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 243/515 (47%), Gaps = 28/515 (5%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN  T+  ++  L   G    A+ +LDEM  RG         +++   C+      A R 
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              +   GC+ D    N +++  C+   VDE + LLR     G  P + SY+ ++ GL  
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 286 AKRYDEA----------YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           AKR+D+           +    +M E    PD+ +Y  +I G+ + G  + A  +LS M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G+ P+  CYN ++KG C     ++A  L  E+++ D   +  TF IL+   C+NG+VD
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQG 454
              +L  +M + GC P V  +  +I+G CK G +++A +L   M   G  P         
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI------ 399

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   S   +++  C A     A +++  + + G LP+ +T+N+LIN  CK G    
Sbjct: 400 --------SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQ 451

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A++L K++ + G  PD ++Y T+I+GL +  + E+A  +   M   G TP+  +Y S+ +
Sbjct: 452 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMAS 511

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
              R  +      ++   ++D + R D ++ +  I    ++ E + AI     M      
Sbjct: 512 ALSREGRTDKIIQMF-DSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 570

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
              + YTI + GL  +G V+EA ++ S L   +A+
Sbjct: 571 PNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 239/556 (42%), Gaps = 30/556 (5%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            S LI  L  +G+T  A + LD     G       Y  +I+G C   RA +         
Sbjct: 47  LSALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYC---RAGQVAAARRLAA 100

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                P+   Y  ++   C    + +AL +L      G          +++   R   + 
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            A    + +  +    D     +++  + E G V + ++LL  +   G  PD   YNA++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 351 KGFCDLGLLDQARSLQVEIWK----------RDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           KG C     D    L VE+ +              P+   +  +I G+C++G  + A  +
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDI 280

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
            ++M   G  P+V  +N ++ GLC A   E+A  L  +M     P              D
Sbjct: 281 LSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL-------------D 327

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   +V+ +C  GL+ +  ++L Q+ E G +PD+ITY ++INGFCK G ++ A+ L K
Sbjct: 328 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 387

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G +P++++Y  ++ GL R +R  DA  +   M Q GC P+P  + +L+ + C++ 
Sbjct: 388 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 447

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYT 639
               A  L  Q L +    D  S  ++ + L K G+ E A++ L  M  K        Y+
Sbjct: 448 LAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 507

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
                L ++G+  + + +F  + +            +I  LCKR   D A+D F Y + N
Sbjct: 508 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 567

Query: 700 GFILRPRVCNYLLRSL 715
           G +        L+R L
Sbjct: 568 GCMPNESTYTILIRGL 583



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 222/477 (46%), Gaps = 27/477 (5%)

Query: 60  LRSFASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           LR  A+   +  ++L+      GF    + L  L +   ++ S    +++S   + G  +
Sbjct: 136 LRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVD 195

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLN---IAFR----KQLFLLALAVY---YEMVKLNCL 165
           + +E   K+  F C+PD+  YNAVL    +A R    ++L +  + V+    +M +  C 
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCT 255

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++  ++ +I+G+ K G  EVA  +L  M   G+ PN   Y  V+ GLC   R +EA  L
Sbjct: 256 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDL 315

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M    C  D V +N L++ FC+   VD  + LL    + G +P + +Y+ +I+G  +
Sbjct: 316 LAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 375

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               DEA    + M     +P+ + Y ++++GL  A +  DA +L+S M ++G +P+   
Sbjct: 376 EGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVT 435

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI   C  GL +QA  L  ++      P+  +++ +I G+ + G  ++A +L N M 
Sbjct: 436 FNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMI 495

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+  +++++   L + G  +K   +F  +             Q      D A   
Sbjct: 496 NKGITPNTIIYSSMASALSREGRTDKIIQMFDSI-------------QDATVRSDAALYN 542

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            ++   C      +A      +  +G +P+  TY  LI G    G +  A  L  EL
Sbjct: 543 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 139/275 (50%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +L+  + + G  ++ +E   +M E  C PDV  Y  V+N   ++ L   A+ +   M 
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C PN +++++++ GL ++ +   A +++  M Q+G LPN  T+  +I+ +C+   A+
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M  +GCSPD ++Y+ +++G  K  + +EAL LL      G  P    YS + 
Sbjct: 451 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 510

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L R  R D+    +  + +  +  D  LY  +I  L +  +   A+   + M   G +
Sbjct: 511 SALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCM 570

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
           P+   Y  LI+G    GL+ +A+ L  E+  R ++
Sbjct: 571 PNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S S VI  L K    +   + L+ + +  ++  + ++  + S   + G  +K ++ F  +
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 529

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + D  +YNAV++   ++     A+  +  MV   C+PN  T+++LI GL+  G  
Sbjct: 530 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 589

Query: 185 EVAIKMLDEMTQR 197
             A  +L E+  R
Sbjct: 590 REAQDLLSELCSR 602


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 162/642 (25%), Positives = 285/642 (44%), Gaps = 135/642 (21%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKN-PQVGFRFFIWAAKRKRL-----------------RSF 63
           LE + P L+ + V  V+ + +N PQ+   F+ W   R                    R+F
Sbjct: 49  LEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNF 108

Query: 64  ASNSAVISMLLKPNG-----------------------FDLYWQTLDELRS--GNVSVVS 98
               +++  L+  NG                       FD   +T  +L+S  G   V+ 
Sbjct: 109 NDALSIMESLMLKNGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIR 168

Query: 99  DV----FFVLISGYYKV-------GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            +    F+V I  +          G+ +K    + +M       +V  +N ++    ++ 
Sbjct: 169 KLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYALCKEC 228

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             L A++V Y M+K+   PN+V+F+++I+  SK G+ ++A+K+                T
Sbjct: 229 KLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRN-------------T 275

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VISG                      SP+ V YN ++NGFCK+RR++ A  +L    K 
Sbjct: 276 EVISG-------------------GSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKL 316

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G      +Y+ LIDG  R    D A+    +M E ++ PD V+Y  +I  L   G++++A
Sbjct: 317 GIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEA 376

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI-- 385
             LLSDM  R I+PD + Y+ L KG C  G L++A  +   I +R+ + + +T  ILI  
Sbjct: 377 SFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINY 436

Query: 386 ---------------------------------CGMCRNGMVDDAQKLFNKMEKAGCFPS 412
                                             G C+ G ++ A ++++K  KA    +
Sbjct: 437 MFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSN 496

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           + ++N+++DGLCK G ++ A LL  K++               N   D  +  T++  +C
Sbjct: 497 LVVYNSILDGLCKQGSIDAARLLVDKLQ--------------QNGFLDSVTYNTLLHGFC 542

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G + KA+ + +++   G+L +I++YN +IN  CK+G I  A++L + +  +G+ PD +
Sbjct: 543 VNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLI 602

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           TY TLI    +    ++   +   M   G  P    Y+SL++
Sbjct: 603 TYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQSLVS 644



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 228/507 (44%), Gaps = 55/507 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            N   +  ++    Q+   + AY +  K++  G      A+N  LN   KL   D+   +
Sbjct: 142 SNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNM 201

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                  G+   + +++ +I  L +  +  EA +    M + +I P+VV + ++I   S+
Sbjct: 202 YMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASK 261

Query: 321 AGKVKDAMKLLSD---MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            G++  A+KL  +   +    + P+   YN +I GFC +  L+ A+++  E+ K     N
Sbjct: 262 MGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSN 321

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+  LI G  R G +D A +L ++M +    P   ++N+LI  L   GELE+A+ L  
Sbjct: 322 ERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFL-- 379

Query: 438 KMEIGKNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
                        LS   NR  + D+ +   + +  C +G ++KA ++   + E   + D
Sbjct: 380 -------------LSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKD 426

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
             T+N LIN   +  NI GA +L   + ++G++PD VTYGTL+ G  +  + E A +I+ 
Sbjct: 427 AYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYD 486

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +  +     +  VY S++   C++                  G  D +   +++  Q G 
Sbjct: 487 KTVKADGKSNLVVYNSILDGLCKQ------------------GSIDAARLLVDKLQQNGF 528

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           +++                   Y   L G C +G+V++A  +F  ++   ++V   S   
Sbjct: 529 LDS-----------------VTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNI 571

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           +I+ LCK G +  AM++       G +
Sbjct: 572 MINFLCKMGLIQQAMELMRAMASQGIV 598



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 39/255 (15%)

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQL---KGLRPDSVTYGTLINGLQRVDREEDA 550
           P+++++N +I+   K+G ++ ALKL +  ++     + P+ VTY  +ING  ++ R E A
Sbjct: 247 PNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESA 306

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +  +M + G   +   Y  L+    R+    +AF L                   +E 
Sbjct: 307 KNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRL------------------CDEM 348

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           ++   + + +                 Y   +  L  +G+++EA  + S ++  + +   
Sbjct: 349 VETRLIPDTV----------------VYNSLIYWLYIEGELEEASFLLSDMINRRILPDE 392

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   L  GLC  G+L+ A+ V  Y ++   +      N L+  +  S++     A  LL
Sbjct: 393 FTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRN--IAGAKQLL 450

Query: 731 CRMKSVGYDLDACLY 745
             M   G   D   Y
Sbjct: 451 SSMIVRGIKPDMVTY 465



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  L K    D     +D+L+  N  + S  +  L+ G+   G+ EKA   F +M  
Sbjct: 501 NSILDGLCKQGSIDAARLLVDKLQQ-NGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMIN 559

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                ++  YN ++N   +  L   A+ +   M     +P+++T++ LI    KS  ++ 
Sbjct: 560 VGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDN 619

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            I++ D M  +G +P++ TY  ++S   Q
Sbjct: 620 VIELHDYMVLKGAVPDRQTYQSLVSPCLQ 648


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 273/589 (46%), Gaps = 46/589 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-------IAFRKQLFLLA 152
            +  L+ G    G   +A+  F  M+   C PD ++Y  +++           + L   A
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           +A  +E       PN+V ++ LI+G    G  E+A+ + + M   G  PN  TYT +ISG
Sbjct: 204 MAEGFE-------PNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISG 256

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C+  + D A  LF +M D+G  P+ V Y AL+ G C   ++D A  LL+S E  G VP 
Sbjct: 257 FCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPN 316

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             + S LID L + +R  EA      + ++ I+ + ++Y  +I GL +AG+   A +L+ 
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            +  +G VPD + Y++LI G C    L +A  +  ++ ++   P+  T+TI+I  + R  
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRL 451
             D ++K+ +KM  AG  P V  +   +   C  G +E A +++ + ++ G  P L    
Sbjct: 437 GADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV--- 493

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +   ++  Y   GL  +A+     +  +G  P+  +Y  L+    K  +
Sbjct: 494 -----------TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542

Query: 512 IN----GALKLFKELQLKGLR-----------PDSV-TYGTLINGLQRVDREEDAFRIFG 555
            N     ++ ++K  ++K L            P  +  Y   +  L RVDR ++A  +  
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKG 614
           +M     TPS  VY S++   CR +  + A +     ++       ES +  I    ++G
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEG 662

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            ++ A Q   +M  K  +++   + I + GL Q G V E  ++ SV+ E
Sbjct: 663 SIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEE 711



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 226/524 (43%), Gaps = 64/524 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI GY  VGD E A++ F +M    C P+V  Y  +++   + +    A+ ++  M
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V    +PN+VT++ LI G    G+ + A ++L  M   G++PN++T +++I  LC+  R 
Sbjct: 274 VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERV 333

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L   +   G   + + Y +L++G CK  R   A  L+++    GFVP   +YS L
Sbjct: 334 GEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL R K   EA      M E+ ++P  V Y ++I  L        + K+L  M   GI
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD + Y   ++ +C  G ++ A  + + +      PN  T+  LICG    G+   A  
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513

Query: 400 LFNKMEKAGCFPS----------------------------------------------- 412
            F  M   GC P+                                               
Sbjct: 514 TFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQ 573

Query: 413 ----VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
               + ++N  +  LC+   L++A +L  +M             Q  N    +    +++
Sbjct: 574 LPSEIDIYNCFLTSLCRVDRLDEAKILLIEM-------------QSANLTPSEDVYTSII 620

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C   ++ +A   +  + +SG +P + +Y  +I+  C+ G+I  A ++F ++  K   
Sbjct: 621 ACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYN 680

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            + + +  LI+GL +     +   +   M +    PS A+Y  L
Sbjct: 681 YEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 261/638 (40%), Gaps = 106/638 (16%)

Query: 149 FLLALAVYYEMVKLNCLP------NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
           FL+ALA +  +  +          N+ T++ LIN    +G    + + L  + + G  P+
Sbjct: 47  FLMALARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPD 106

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
              YT  + G C+      A RLF+ M   GC      Y ALL+G C    V EA+++  
Sbjct: 107 SHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFA 166

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             + DG  P    Y+ ++ GL  A R  EA         E  EP+VV+Y  +I G    G
Sbjct: 167 GMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVG 226

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            ++ A+ +   M   G  P+   Y  LI GFC    LD+A  L   +     +PN  T+T
Sbjct: 227 DLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYT 286

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G C +G +D A +L   ME +G  P+    + LID LCK   + +A LL       
Sbjct: 287 ALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGS---- 342

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                   L Q G +V++     ++++  C AG    A +++  L   G +PD  TY+SL
Sbjct: 343 --------LIQKGIKVNEIV-YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSL 393

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV------------------ 544
           I+G C+   ++ A+ +  ++  KG++P  VTY  +I+ L R                   
Sbjct: 394 IDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGI 453

Query: 545 -----------------DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
                             R EDA  +   M  +G  P+   Y +L+         S AFS
Sbjct: 454 KPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFS 513

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAI----------------QGLLEMDFKLN 631
            +   + +    ++ES   +   L K E  N I                 GLLE   KL 
Sbjct: 514 TFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQ 573

Query: 632 -DFQLAPYTIWLIGLCQDGQVKEAL---------------NIFSVLVEC--------KAI 667
              ++  Y  +L  LC+  ++ EA                ++++ ++ C        +A+
Sbjct: 574 LPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEAL 633

Query: 668 VTPPSCVK------------LIHGLCKRGYLDLAMDVF 693
               S VK            +I  LC+ G +  A  VF
Sbjct: 634 TFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVF 671



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 172/385 (44%), Gaps = 25/385 (6%)

Query: 329 KLLSDMRE---RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           ++L+DM     R    +   Y  LI  +C  G L  ++     + +    P++H +T  +
Sbjct: 55  RMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFV 114

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G CR G++  A +LF  M   GC  +   + AL+ GLC AG + +A  +F  M      
Sbjct: 115 VGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM------ 168

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  Q      D     TMV   C AG   +A  +L      G  P+++ YN+LI+G
Sbjct: 169 -------QADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +C VG++  A+ +F+ + + G  P+  TY  LI+G  +  + + A  +F +M   G  P+
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE-----EFLQKGEVENAI 620
              Y +L+   C   +   A+ L LQ + +     +E   S+      +  + GE +  +
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRL-LQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
             L++   K+N+     YT  + GLC+ G+   A  +   LV    +    +   LI GL
Sbjct: 341 GSLIQKGIKVNEIV---YTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRP 705
           C++  L  AM V    ++ G    P
Sbjct: 398 CRQKELSEAMLVLDDMMEKGVQPSP 422



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/397 (21%), Positives = 159/397 (40%), Gaps = 51/397 (12%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L  L    + V   V+  LI G  K G    A      +      PD + Y+++++   R
Sbjct: 340 LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR 399

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A+ V  +M++    P+ VT++++I+ L +    + + K+LD+M   GI P+ FT
Sbjct: 400 QKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFT 459

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YTI +   C   R ++A  + L M D G  P+ V YNAL+ G+  L    +A +  +   
Sbjct: 460 YTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMV 519

Query: 266 KDGFVPRLGSYS------------------------------------------------ 277
            +G  P   SY+                                                
Sbjct: 520 ANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEID 579

Query: 278 ---CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
              C +  L R  R DEA     +M    + P   +Y  +I        + +A+  +  M
Sbjct: 580 IYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSM 639

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
            + G +P    Y  +I   C+ G +  A+ +  ++  ++       + ILI G+ + G V
Sbjct: 640 VKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYV 699

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
            +   L + ME+    PS  ++  L   +  A ++++
Sbjct: 700 AECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 9/255 (3%)

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  YC AG +  + + L  L  +G  PD   Y S + G+C+ G +  A +LF  + L+
Sbjct: 77  TLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLR 136

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G    + TY  L++GL       +A  +F  M  +GC P P VY +++   C   +   A
Sbjct: 137 GCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREA 196

Query: 586 FSLWLQYLRDISGRDDESM-----KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
            +L    L D      E         I+ +   G++E A+     MD       +  YT 
Sbjct: 197 ETL----LSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + G C+  ++  A+ +FS +V+   +    +   LI G C  G LD A  +      +G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312

Query: 701 FILRPRVCNYLLRSL 715
            +     C+ L+ +L
Sbjct: 313 LVPNEWTCSVLIDAL 327



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 24/307 (7%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L++  G D   + LD++ +  +      + + +  Y   G  E A      M +  
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487

Query: 129 CQPDVYIYNAVL----NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
             P++  YNA++    N+    Q F    + +  MV   C PN  ++++L+  L K   +
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAF----STFKHMVANGCKPNEESYTVLLRLLIKKESS 543

Query: 185 ------EVAI----------KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
                  V+I           +L+EM +  +      Y   ++ LC+++R DEA  L ++
Sbjct: 544 NNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIE 603

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+ +  +P    Y +++   C+L+ + EAL  + S  K G++P+L SY  +I  L     
Sbjct: 604 MQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGS 663

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
              A   +  M  ++   + + + ++I GL + G V +   LLS M E+   P    Y  
Sbjct: 664 IQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYAR 723

Query: 349 LIKGFCD 355
           L     D
Sbjct: 724 LTGKITD 730


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 215/407 (52%), Gaps = 18/407 (4%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++ LI GL K+ K   A+++L  M   G   +  TYT +I GLC+    D A  L  KM 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D+GC+P+ V Y AL++G CK RR  +A+  ++   + G  P L +Y+ LI GL  A R D
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 291 EAYAWYRK-MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +A    ++ M E    PDVV Y   I GL +AGK+   +++L +M   GI PD   + ++
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G C    +D A  +   + +R  +P++ T++I++  + R   +D  +++   M K+G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
           +     +  LI  L +AG++E A+  + + ME G               V +  +    +
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQAMEAGC--------------VMEVYTHNAFI 298

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG-L 527
              C +G    A  IL+ + ESG+LP++++YN +I+G CK GN++ A KL +++   G  
Sbjct: 299 GALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCC 358

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQM-PQNGCTPSPAVYKSLM 573
           +PD + + TLI+G  +  R   A ++  +M  +N C P    Y +++
Sbjct: 359 KPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 3/411 (0%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+ + + K + P+         A      S  + + +I  L K    D     L ++   
Sbjct: 15  TLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADA 74

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFLL 151
             +     +  LI G  K      A+++  +M    C+PD+  YN++++ +    ++   
Sbjct: 75  GCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDA 134

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            L +   M++   +P++VT++  I+GL K+GK +  ++ML+EM + GI P+  T+  +IS
Sbjct: 135 GLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIIS 194

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+ NR D+A+++F  M + GC PD + Y+ +L+   +  R+D    +L    K G   
Sbjct: 195 GLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYA 254

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ LI  L RA   + A   Y +  E     +V  +   I  L  +GK   A  +L
Sbjct: 255 LSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNIL 314

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCR 390
             M E G +P+   YN +I G C  G +D A  L  ++       P+   F  LI G C+
Sbjct: 315 LGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCK 374

Query: 391 NGMVDDAQKLFNKME-KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            G +  AQ+L  +M+ K  C P V  +N +IDG  K G L++A LL  +M+
Sbjct: 375 AGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 199/449 (44%), Gaps = 31/449 (6%)

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M       D  +Y  +I GL +A K + A++LL  M   G       Y  LI G C  G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           LD A++L  ++      PN  T+T LI G+C+     DA +   +M ++GC P +  +N+
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           LI GLC A  ++ A L+  ++ I               R+ D  +  T +   C AG + 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIES------------GRIPDVVTYNTFISGLCKAGKLD 168

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           K  ++L ++   G  PD++T+ S+I+G CK   I+ A ++FK +  +G  PDS+TY  ++
Sbjct: 169 KGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIML 228

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG 598
           + L R +R +    +   M ++G     A Y  L+    R      A   + Q +     
Sbjct: 229 DNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCV 288

Query: 599 RDDESMKS-IEEFLQKGE---VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
            +  +  + I    + G+    +N + G++E     N   L  Y   + GLC+ G V +A
Sbjct: 289 MEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPN---LLSYNFVIDGLCKSGNVDDA 345

Query: 655 LNIFSVLVE---CKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
             +   +++   CK     P  +    LI G CK G L  A    L  +K   I  P V 
Sbjct: 346 WKLSRKMLDSGCCK-----PDVIFFNTLISGFCKAGRLSQAQQ-LLKEMKAKNICVPDVV 399

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            Y       SK      A  LL  M++VG
Sbjct: 400 TYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 2/238 (0%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           ++ S + K       F+ F    +R  +    + S ++  L + N  D   + L+ +   
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
               +S  +  LI    + GD E A  ++ +  E  C  +VY +NA +    R   F LA
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLA 310

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVIS 211
             +   M++   LPN+++++ +I+GL KSG  + A K+  +M   G   P+   +  +IS
Sbjct: 311 KNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLIS 370

Query: 212 GLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           G C+  R  +A +L  +MK    C PD V YN +++G  K   + +A  LL   +  G
Sbjct: 371 GFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 288/626 (46%), Gaps = 23/626 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V   +  + VL+ G  K    ++A+E    M       D   Y  ++    R + 
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
             +AL + ++M++L  +P+    S +I+ L K    E A  +  ++   G++PN F Y  
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I  LC+  R D+A RLF +M   G  P+ V Y  L++  CK   +++AL L       G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               +  Y+ LI+G  +    D A      M +E + P    Y  +I GL   G +   M
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L  +M ERGI  + Y + ALI GFC    +D+A  L  ++   + +PN  TF ++I G 
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +  A +L+++M + G  P    + +LI GLC    + KAN     +E        
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-------- 598

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    V +  SL  ++  +   G   + Y +  ++A  G   D++++  ++    K
Sbjct: 599 -----NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 653

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             +   +  LF+E++ +G++PD + Y  +I+ L + +    A   + QM  +G +P+   
Sbjct: 654 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 713

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           +  L+   C+      A  L  + L      +  +    ++ F  +G++E A + L    
Sbjct: 714 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAM 772

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRG 684
            + +   +  + I + GLC+ G+++EA+++ S + E       P C+    +IH LCK G
Sbjct: 773 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG---FSPDCISYSTIIHELCKMG 829

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++ A +++   L  G  L+P V  Y
Sbjct: 830 DINKAFELWNEMLYKG--LKPDVVAY 853



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 232/489 (47%), Gaps = 14/489 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D++R   + V    +  LI+GY K G  ++A      M +    P    Y+ ++    R
Sbjct: 419 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 478

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  + ++ EM +     N  TF+ LING  K  K + A ++ D+M    ++PN+ T
Sbjct: 479 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + ++I G C +    +A++L+ +M + G  PD   Y +L++G C    V +A   +   E
Sbjct: 539 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 598

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               V    S + L+ G FR  R+ E Y  + +M    ++ D+V + +++    +    +
Sbjct: 599 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 658

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +  L  +M+E+G+ PD   Y  +I        + QA +   ++      PNT T T+LI
Sbjct: 659 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 718

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C++G +  A+ L  +M      P+   +N  +D     G++EKA  L   M  G   
Sbjct: 719 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 778

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               S   +++  C AG I +A  ++ ++ ESG  PD I+Y+++I+ 
Sbjct: 779 SI--------------VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 824

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK+G+IN A +L+ E+  KGL+PD V Y   I         + A  I+  M ++G  P+
Sbjct: 825 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 884

Query: 566 PAVYKSLMT 574
              Y++L++
Sbjct: 885 WDTYRALLS 893



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 258/609 (42%), Gaps = 54/609 (8%)

Query: 93  NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           N+ V +D   +  L+ G+ ++ + E AL     M      P     + +++   +K+L  
Sbjct: 284 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 343

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A ++  ++  L  +PN+  ++ LI+ L K+ + + A ++  EM  RG+ PN+ TY I+I
Sbjct: 344 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 403

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC+    ++A  LF KM+D G       YN+L+NG+CK   +D A  LL    K+G  
Sbjct: 404 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 463

Query: 271 PRLGSYSCLIDGLFRA-----------------------------------KRYDEAYAW 295
           P   SYS LI GL R                                    K+ DEA   
Sbjct: 464 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 523

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + KM +  + P+ V + VMI G    G ++ A +L   M E G+ PD Y Y +LI G C 
Sbjct: 524 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A     ++    ++ N  + T L+ G  R G   +   L+++M   G    +  
Sbjct: 584 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 643

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F  ++    K  + EK+ +LF +M E G  P              D      M++     
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKP--------------DDIFYTCMIDALSKE 689

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A     Q+   G  P+ +T+  LIN  CK G +  A  L KE+    + P+  TY
Sbjct: 690 ENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTY 749

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
              ++        E A  +   M Q G   S   +  L+   C+  K   A  L  +   
Sbjct: 750 NCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 808

Query: 595 DISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                D  S  +I  E  + G++  A +   EM +K     +  Y I++      G+  +
Sbjct: 809 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 868

Query: 654 ALNIFSVLV 662
           AL I++ ++
Sbjct: 869 ALGIYTNMI 877



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 240/552 (43%), Gaps = 89/552 (16%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I  L K   FD   +   E+    +      + +LI    K G  E AL  F 
Sbjct: 362 FAYN-ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM++   +  VY YN+++N   ++     A  +   MVK    P   ++S LI GL ++G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                +++  EM +RGI  N +T+T +I+G C+  + DEA RLF KM DS   P+ V +N
Sbjct: 481 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 540

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL------------------- 283
            ++ G+C +  + +A  L     + G  P   +Y  LI GL                   
Sbjct: 541 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENS 600

Query: 284 ----------------FRAKRYDEAYA-W------------------------------- 295
                           FR  R+ E Y  W                               
Sbjct: 601 YAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 660

Query: 296 ---YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R+M E+ ++PD + Y  MI  LS+   +  A+     M   G  P+T  +  LI  
Sbjct: 661 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 720

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G L  A  L  E+   + LPN  T+   +      G ++ A+ L + M + G   S
Sbjct: 721 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 779

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +  FN LI GLCKAG++++A  L  K+ E G +P              D  S  T++ + 
Sbjct: 780 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP--------------DCISYSTIIHEL 825

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV-GNINGALKLFKELQLKGLRPD 530
           C  G I+KA+++  ++   G  PD++ YN  I  +C V G  + AL ++  +   G++P+
Sbjct: 826 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPN 884

Query: 531 SVTYGTLINGLQ 542
             TY  L++G+ 
Sbjct: 885 WDTYRALLSGIS 896



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 15/412 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  T S ++  L K  +  +A  + D+M Q G+  +++ YT  I   C+    D A  L 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           ++M+  G     V YN L+ G CK  RV EA+ +       G      +Y  L+ G  R 
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +  + A      M      P       MI  L +   V++A  L   + + G+VP+ + Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NALI   C     D A  L  E+  R   PN  T+ ILI  +C+ GM++DA  LF+KM  
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G   +V  +N+LI+G CK G L++A  L   M + G  PT               AS  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT--------------AASYS 470

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++   C  G +    ++  ++AE G   +  T+ +LINGFCK   ++ A +LF ++   
Sbjct: 471 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 530

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + P+ VT+  +I G   V     AF+++ QM + G  P    Y+SL++  C
Sbjct: 531 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 582



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 214/466 (45%), Gaps = 22/466 (4%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  N++T + ++  L +I +   A  LF KM  SG   D   Y A +  +C+ R +D A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   E +G       Y+ L+ GL +  R  EA      M    +  D V Y  ++ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +++ A+++  DM   G VP     + +I       L+++A SL  ++     +PN
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  LI  +C+N   DDA +LF +M   G  P+   +  LI  LCK G +E A  LF 
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           KM + G   T++                 +++  YC  G + +A  +L  + + G  P  
Sbjct: 421 KMRDKGIKVTVY--------------PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 466

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            +Y+ LI G C+ G+++  ++L +E+  +G+  ++ T+  LING  +  + ++A R+F +
Sbjct: 467 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 526

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGE 615
           M  +   P+   +  ++   C       AF L+ Q +      D+ + +S I        
Sbjct: 527 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 586

Query: 616 VENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           V  A + + +++     LN+F L   T  L G  ++G+  E  +++
Sbjct: 587 VSKANEFVADLENSYAVLNNFSL---TALLYGFFREGRFTETYHLW 629



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 36/165 (21%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P+ + YN  L+    +     A  ++  M++ + L +IV+F++LI GL K+GK + AI +
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNILIKGLCKAGKIQEAIDL 802

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQ---INRADE---------------AYRLFLK---- 228
           + ++T+ G  P+  +Y+ +I  LC+   IN+A E               AY +F++    
Sbjct: 803 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 862

Query: 229 -------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
                        M  SG  P++  Y ALL+G   +    +AL L
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 265/604 (43%), Gaps = 92/604 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D     LD ++   V      +   I  Y +    E+A + +  M       DV   +A+
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSAL 280

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +    R   F  A A++ EM K+   PN VT+  LI+ L+K+G+ +  + +L EM  RG+
Sbjct: 281 VAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGV 340

Query: 200 L-----------------------------------PNKFTYTIVISGLCQINRADEAYR 224
           +                                   PN  TYT++I  LC+ +  DEA +
Sbjct: 341 VMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQ 400

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++   SP+ V +++++NGF K   +D+A    R  ++ G  P + +Y  LIDG F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD----------- 333
           + +  D A   Y  M  E ++ +  +   ++ GL + GK+++AM L  D           
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 334 ------------------------MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                   + +R ++PD   YN  I   C LG   +A+S   E+
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL ++M+ +   P++  +N L+ GL   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 430 EKANLLFYKM-EIGKNPTLFL--RLSQGGNR---------VH----------DKASLQTM 467
           EKA  L  +M   G +P+     R+ Q  ++         +H          D     T+
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C  G+  KA  +L ++  SG  PD IT+N+LI G CK  +++ A   + ++  + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+ V R  +A  +  +M ++G  P+   Y  L T   ++     A  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 588 LWLQ 591
           L+ +
Sbjct: 821 LYCE 824



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 169/644 (26%), Positives = 275/644 (42%), Gaps = 26/644 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G+ + G  + A      MKE    P+V  Y   +    R +    A  +Y  MV
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   L ++VT S L+ GL + G+   A  +  EM + G  PN  TY  +I  L +  R  
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E   L  +M   G   D V Y AL++   K  + DE    LR    D   P   +Y+ LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L +A   DEA     +M E+ I P+VV +  +I G  + G +  A +    M+ERGI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI GF      D A  +  ++       N      L+ G+ +NG +++A  L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F     +G       +  LIDGL KAG++  A       + G+   L  R     N + D
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA------FKFGQE--LMDR-----NMLPD 553

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                  +   C  G   +A   L ++   G  PD  TYN++I   C+ G    ALKL  
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+++  ++P+ +TY TL+ GL      E A  +  +M   G +PS   ++ ++    + R
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
           +  +   +  +++ +     D ++ +  ++     G    A   L EM        +AP 
Sbjct: 674 RLDVILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS----GIAPD 728

Query: 639 TI----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           TI     ++G C+   +  A   ++ ++         +   L+ GL   G +  A  V +
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
              K+G  L P    Y + +    K + KV A  L C M   G+
Sbjct: 789 EMEKSG--LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGF 830



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 260/558 (46%), Gaps = 20/558 (3%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T SLL   ++  G T  A+ + D MT +G+  +   Y  +++G C+  + D A  +   M
Sbjct: 173 TLSLL--DIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           K++G  P+   Y   +  +C+ + V+EA  L     ++G +  + + S L+ GL R  R+
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            EAYA +R+M +    P+ V Y  +I  L++AG+ K+ + LL +M  RG+V D   Y AL
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +      G  D+ +         +  PN  T+T+LI  +C+   VD+A+++  +ME+   
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P+V  F+++I+G  K G L+KA      M E G NP +               +  T++
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV--------------TYGTLI 456

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +        A ++   +   G   +    +SL+NG  + G I  A+ LFK+    GL 
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            D V Y TLI+GL +      AF+   ++      P   VY   +   C   KF  A S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKS- 575

Query: 589 WLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           +L  +R++  + D+S  +  I    +KGE   A++ L EM        L  Y   + GL 
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
             G V++A  + + +V      +  +  +++    +   LD+ +D+  + +  G      
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 707 VCNYLLRSLLFSKDNKKV 724
           V N LL+ L +    +K 
Sbjct: 696 VYNTLLQVLCYHGMTRKA 713



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 242/559 (43%), Gaps = 62/559 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K +  D   Q L E+   ++S     F  +I+G+ K G  +KA E    MKE
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y  +++  F+ Q    AL VY++M+      N      L+NGL ++GK E 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  + +  G+  +   YT +I GL +      A++   ++ D    PD V YN  +N
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C L +  EA + L      G  P   +Y+ +I    R     +A     +M    I+P
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP------------------------- 341
           +++ Y  ++ GL   G V+ A  LL++M   G  P                         
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 342 ----------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                     D   YN L++  C  G+  +A  +  E+      P+T TF  LI G C++
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLF 448
             +D+A   + +M      P++  FN L+ GL   G + +A  +  +ME   +  N   +
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             L+ G  +  +K                 +A ++  ++   G +P + TYN+LI+ F K
Sbjct: 803 DILATGHGKQSNKV----------------EAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP-- 566
            G +  A +LFK++Q +G+ P S TY  L++G  R+    +  +    M + G +PS   
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 567 ------AVYKSLMTWSCRR 579
                 A  K  MTW  +R
Sbjct: 907 LSFICRAFSKPGMTWQAQR 925



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 173/405 (42%), Gaps = 35/405 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K       ++   EL   N+   + V+ V I+    +G  ++A     +M+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   YN ++    RK     AL + +EM   +  PN++T++ L+ GL  +G  E 
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD-------------------------- 220
           A  +L+EM   G  P+  T+  V+    Q  R D                          
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 221 ---------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                    +A  +  +M  SG +PD + +NAL+ G CK   +D A A           P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ L+ GL    R  EA     +M +  +EP+ + Y ++  G  +     +AM+L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  +G VP    YNALI  F   G++ QA+ L  ++ KR   P + T+ IL+ G  R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
               + +K    M++ G  PS G  + +     K G   +A  L 
Sbjct: 883 RNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 143/607 (23%), Positives = 249/607 (41%), Gaps = 128/607 (21%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D  + NALL   C+LR +  A+ALLRS       P   +Y+ L+  L     +  A A  
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAAL---SDHAHAPAVL 123

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKD------------------------------ 326
            +M +  +  D V    ++ GL   G+V                                
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFG 183

Query: 327 ----AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
               A+ +   M  +G+  D   YN L+ GFC  G +D AR +   + +    PN  T+T
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-I 441
             I   CR   V++A  L+  M + G    V   +AL+ GLC+ G   +A  LF +M+ +
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV 303

Query: 442 GKNP------TLFLRLSQGG---------------------------------------- 455
           G  P      TL   L++ G                                        
Sbjct: 304 GAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEV 363

Query: 456 ----------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                     N   +  +   +++  C A  + +A ++L+++ E    P+++T++S+ING
Sbjct: 364 KDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVING 423

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           F K G ++ A +  + ++ +G+ P+ VTYGTLI+G  +   ++ A  ++  M   G   +
Sbjct: 424 FVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVN 483

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAI 620
             +  SL+    +  K   A +L+    +D SG     D  +  + I+   + G++  A 
Sbjct: 484 KFIVDSLVNGLRQNGKIEEAMALF----KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 621 QGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP---SC 673
           +       +L D  + P    Y +++  LC  G+ KEA    S L E + +   P   + 
Sbjct: 540 K----FGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK---SFLTEMRNMGLKPDQSTY 592

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLC 731
             +I   C++G    A+   L+ +K   I +P +  Y  L+  L  +   +K  A +LL 
Sbjct: 593 NTMIVSHCRKGETAKALK-LLHEMKMSSI-KPNLITYNTLVAGLFGTGAVEK--AKYLLN 648

Query: 732 RMKSVGY 738
            M S G+
Sbjct: 649 EMVSAGF 655



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 141/319 (44%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E++  ++      +  L++G +  G  EKA     +M      P    +  VL    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   + L ++  M+      +I  ++ L+  L   G T  A  +L+EM   GI P+  T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  +I G C+ +  D A+  + +M     SP+   +N LL G   + R+ EA  +L   E
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P   +Y  L  G  +     EA   Y +M  +   P V  Y  +I   ++AG + 
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +L  DM++RG+ P +  Y+ L+ G+  +    + +    ++ ++   P+  T + + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 386 CGMCRNGMVDDAQKLFNKM 404
               + GM   AQ+L   +
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
             D+ +YN +L +     +   A  V  EM+     P+ +TF+ LI G  KS   + A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
              +M  + I PN  T+  ++ GL  + R  EA  + ++M+ SG  P+ + Y+ L  G  
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K     EA+ L       GFVP++ +Y+ LI    +A    +A   ++ M +  + P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y +++ G S      +  K L DM+E+G  P     + + + F   G+  QA+ L   +
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930

Query: 370 WK 371
           ++
Sbjct: 931 YR 932


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 235/502 (46%), Gaps = 13/502 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  DE+++         F  L+  Y K    ++A+E   +M+   C P V  YN++++  
Sbjct: 264 QVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSY 323

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +  L   A+A+  EM      P++VT++ LI+GL ++GK + AI   DEM + G  PN 
Sbjct: 324 VKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNL 383

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I       +  E   +F +++ +G  PD V +N LL  F +     E   + + 
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +K G++P   +Y  LI    R   +D A   Y++M E  I PDV  Y  ++  L+  G+
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            + A KL ++M ER   PD Y Y++L+  + +   LD+ ++L  +I+     P+      
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+    +   + +A+K F ++ +  C   + + NA++    K       N +  K+E   
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK-------NRMVRKVE--- 613

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                L L +        A+  +++  Y   G   K   IL ++  SG  PD  +YN++I
Sbjct: 614 ---KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
             + + G +  A +LF E++  GL+PD VTY   +         E+A  +   M   GC 
Sbjct: 671 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 730

Query: 564 PSPAVYKSLMTWSCRRRKFSLA 585
           P+   Y S++   CR  K + A
Sbjct: 731 PNERTYNSIVEGYCRNGKLTDA 752



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 262/593 (44%), Gaps = 23/593 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL-FLLALAVYYE 158
            +  L+S + + G    A+  F +M +   QP +  YN VL++  +  + +   + +   
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    P+  T++ LI+   +    + A ++ DEM   G  P+K T+  ++    +  R
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA  +  +M+  GC P  V YN+L++ + K   +++A+AL +  E  G  P + +Y+ 
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTT 353

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL RA + D A   Y +M     +P++  Y  +I+     GK  + M +  ++R  G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            VPD   +N L+  F   GL  +   +  E+ K   +P   T+  LI    R G+ D A 
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNR 457
           +++ +M +AG +P V  +NA++  L + G  E+A  LF +ME     P            
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP------------ 521

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ S  +++  Y  A  + K   +   +      P      +L+    KV N+  A K
Sbjct: 522 --DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 579

Query: 518 LFKELQLKGLRPDSVTYGTLIN--GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            F EL+ K    D      +++  G  R+ R+ +  +I   M ++    S A Y SLM  
Sbjct: 580 AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE--KILSLMKESAINLSAATYNSLMHM 637

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDF 633
             R        ++ L  ++    R D    +  I  + +KG+++ A +   EM       
Sbjct: 638 YSRLGDCEKCENI-LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            +  Y I++     +   +EA+ +   +V         +   ++ G C+ G L
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 197/400 (49%), Gaps = 18/400 (4%)

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  ++++G+   A  +LD        P+   YT ++S   +  R  +A  +F +M DSG 
Sbjct: 148 IRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV 203

Query: 235 SPDFVAYNALLNGFCKLRRV-DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            P  V YN +L+ + K+     E + L+ S ++ G  P   +Y+ LI    R   Y EA 
Sbjct: 204 QPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAA 263

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M     EPD V +  ++    +A +  +A++++ +M   G  P    YN+LI  +
Sbjct: 264 QVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSY 323

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              GLL+QA +L+ E+  +   P+  T+T LI G+ R G +D A   +++M + GC P++
Sbjct: 324 VKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNL 383

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +NALI      G+  +   +F ++             +    V D  +  T++  +  
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDEL-------------RSAGFVPDIVTWNTLLAVFGQ 430

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            GL  +   +  ++ ++G +P+  TY SLI+ + + G  + A++++K +   G+ PD  T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           Y  +++ L R  R E A ++F +M +  C P    Y SL+
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 180/387 (46%), Gaps = 24/387 (6%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+ EA ALL +       P  G+Y+ L+    RA R+ +A A +R+M +  ++P +V Y 
Sbjct: 156 RLAEASALLDAAPG----PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN 211

Query: 313 VMIRGLSE-AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           V++   S+ A   K+ ++L++ M+E G+ PD Y YN LI       L  +A  +  E+  
Sbjct: 212 VVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA 271

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  TF  L+    +    D+A ++  +ME+ GC PSV  +N+LI    K G LE+
Sbjct: 272 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 331

Query: 432 ANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  L  +ME+ G  P              D  +  T++     AG I  A     ++  +
Sbjct: 332 AVALKQEMEVKGIKP--------------DVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P++ TYN+LI      G     + +F EL+  G  PD VT+ TL+    +   + + 
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +F +M + G  P    Y SL++   R   F LA  ++ + +      D  +  ++   
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 611 LQKG----EVENAIQGLLEMDFKLNDF 633
           L +G    + E     + E D K +++
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEY 524



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 177/410 (43%), Gaps = 78/410 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LISG  + G  + A+  + +M    C+P++  YNA++ +   +  F   +AV+ E+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409

Query: 160 VKLNCLPNIVTFSLLI-----NGL------------------------------SKSGKT 184
                +P+IVT++ L+     NGL                              S+ G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++A+++   M + GI P+  TY  V+S L +  R ++A +LF +M++  C PD  +Y++L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL-------------------FR 285
           L+ +   +R+D+    +++   D +  R+  ++ L+  L                    R
Sbjct: 530 LHAYANAKRLDK----MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585

Query: 286 AKR-------YDEAYAWYRK-------------MFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            KR        +   + Y K             M E  I      Y  ++   S  G  +
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
               +L++++  G+ PD Y YN +I  +   G + +A  L  E+      P+  T+ I +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
                N M ++A +L   M   GC P+   +N++++G C+ G+L  A + 
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIF 755



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 35/291 (12%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL  Q    +    +      +  ++S   + G  E+A + F +M+E DC+PD Y Y++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 139 VLNI---AFR-----------------------KQLFLL---------ALAVYYEMVKLN 163
           +L+    A R                       K L L+         A   + E+ +  
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  +I   + +++   K+       K+L  M +  I  +  TY  ++    ++   ++  
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  ++K SG  PD  +YN ++  + +  ++ EA  L    +  G  P + +Y+  +   
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 708

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
                ++EA    R M  +  +P+   Y  ++ G    GK+ DA   +S++
Sbjct: 709 VSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 267/604 (44%), Gaps = 92/604 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D     LD ++   V      +   I  Y +    E+A + +  M       DV   +A+
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSAL 280

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +    R   F  A A++ EM K+  +PN VT+  LI+ L+K+G+ +  + +L EM  RG+
Sbjct: 281 VAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGV 340

Query: 200 LP-----------------------------------NKFTYTIVISGLCQINRADEAYR 224
           +                                    N  TYT++I  LC+ +  DEA +
Sbjct: 341 VMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQ 400

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++   SP+ V +++++NGF K   +D+A    R  ++ G  P + +Y  LIDG F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD----------- 333
           + +  D A   Y  M  E +E +  +   ++ GL + GK+++AM L  D           
Sbjct: 461 KFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 334 ------------------------MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                   + +R ++PD   YN  I   C LG   +A+S+  E+
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL ++M+ +   P++  +N L+ GL   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 430 EKANLLFYKM-EIGKNPTLFL--RLSQGGNR---------VH----------DKASLQTM 467
           EKA  L  +M   G +P+     R+ Q  ++         +H          D     T+
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C  G+  KA  +L ++  SG  PD IT+N+LI G CK  +++ A   + ++  + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+ V R  +A  +  +M ++G  P+   Y  L+T   ++     A  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMR 820

Query: 588 LWLQ 591
           L+ +
Sbjct: 821 LYCE 824



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 173/679 (25%), Positives = 298/679 (43%), Gaps = 38/679 (5%)

Query: 90  RSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           R G +  +  + +  LI+GY +VGD   AL    +M       DV  YN ++    R   
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  V   M +    PN+ T++  I    ++   E A  + + M + G+L +  T + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +++GLC+  R  EAY LF +M   G  P+ V Y  L++   K  R  E L+LL      G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
            V  L +Y+ L+D L +  + DE     R    + +  + V Y V+I  L +A  V +A 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           ++L +M E+ I P+   ++++I GF   GLLD+A   +  + +R   PN  T+  LI G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK---------- 438
            +    D A ++++ M   G   +  + ++L++GL + G++E+A  LF            
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 439 ----------MEIGKNPTLFLRLSQ---GGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
                      + G  PT F +  Q     N + D       +   C  G   +A  IL 
Sbjct: 520 VNYTTLIDGLFKAGDMPTAF-KFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILT 578

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++   G  PD  TYN++I   C+ G    ALKL  E+++  ++P+ +TY TL+ GL    
Sbjct: 579 EMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTG 638

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
             E A  +  +M   G +PS   ++ ++    + R+  +   +  +++ +     D ++ 
Sbjct: 639 AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH-EWMMNAGLHADITVY 697

Query: 606 S--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI----WLIGLCQDGQVKEALNIFS 659
           +  ++     G    A   L EM        +AP TI     ++G C+   +  A   ++
Sbjct: 698 NTLLQVLCYHGMTRKATVVLEEMLGS----GIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            ++         +   L+ GL   G +  A  V +   K+G  L P    Y +      K
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG--LEPNNLTYDILVTGHGK 811

Query: 720 DNKKVHAYHLLCRMKSVGY 738
            + KV A  L C M   G+
Sbjct: 812 QSNKVEAMRLYCEMVGKGF 830



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 242/559 (43%), Gaps = 62/559 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K +  D   Q L E+   ++S     F  +I+G+ K G  +KA E    MKE
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y  +++  F+ Q    AL VY++M+      N      L+NGL ++GK E 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEE 502

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  + +  G+  +   YT +I GL +      A++   ++ D    PD V YN  +N
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C L +  EA ++L      G  P   +Y+ +I    R     +A     +M    I+P
Sbjct: 563 CLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP------------------------- 341
           +++ Y  ++ GL   G V+ A  LL++M   G  P                         
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 342 ----------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                     D   YN L++  C  G+  +A  +  E+      P+T TF  LI G C++
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLF 448
             +D+A   + +M      P++  FN L+ GL   G + +A  +  +ME   +  N   +
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             L  G  +  +K                 +A ++  ++   G +P + TYN+LI+ F K
Sbjct: 803 DILVTGHGKQSNKV----------------EAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP-- 566
            G +  A +LFK++Q +G+ P S TY  L++G  R+    +  +    M + G +PS   
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 567 ------AVYKSLMTWSCRR 579
                 A  K  MTW  +R
Sbjct: 907 LSFICRAFSKPGMTWQAQR 925



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 271/632 (42%), Gaps = 92/632 (14%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P  V +++L+  LS       A  +L EM +RG+  +  T   +++GLC+  + D A  L
Sbjct: 101 PTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 226 ---------------------FLKMKDS-------------GCSPDFVAYNALLNGFCKL 251
                                + ++ D+             G   D V YN L+ GFC+ 
Sbjct: 158 ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 252 RRVDEALALLRSFEKDGFVPRLGSY----------------------------------- 276
            +VD A  +L   ++ G  P + +Y                                   
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S L+ GL R  R+ EAYA +R+M +    P+ V Y  +I  L++AG+ K+ + LL +M  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQAR-SLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           RG+V D   Y AL+      G  D+ + +L+  +    SL N  T+T+LI  +C+   VD
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL-NGVTYTVLIDALCKAHNVD 396

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
           +A+++  +ME+    P+V  F+++I+G  K G L+KA      M E G NP +       
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV------ 450

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +  T+++ +        A ++   +   G   +    +SL+NG  + G I  
Sbjct: 451 --------TYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEE 502

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ LFK+    GL  D V Y TLI+GL +      AF+   ++      P   VY   + 
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
             C   KF  A S+ L  +R++  + D+S  +  I    +KGE   A++ L EM      
Sbjct: 563 CLCILGKFKEAKSI-LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             L  Y   + GL   G V++A  + + +V      +  +  +++    +   LD+ +D+
Sbjct: 622 PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDI 681

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
             + +  G      V N LL+ L +    +K 
Sbjct: 682 HEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 174/405 (42%), Gaps = 35/405 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K       ++   EL   N+   + V+ V I+    +G  ++A     +M+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRN 582

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   YN ++    RK     AL + +EM   +  PN++T++ L+ GL  +G  E 
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD-------------------------- 220
           A  +L+EM   G  P+  T+  V+    Q  R D                          
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 221 ---------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                    +A  +  +M  SG +PD + +NAL+ G CK   +D A A           P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ L+ GL    R  EA     +M +  +EP+ + Y +++ G  +     +AM+L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY 822

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  +G VP    YNALI  F   G++ QA+ L  ++ KR   P + T+ IL+ G  R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
               + +K    M++ G  PS G  + +     K G   +A  L 
Sbjct: 883 RNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 254/599 (42%), Gaps = 112/599 (18%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRS--------------FEKDGFVPRLGSYSC---- 278
           D  + NALL   C+LR +  A+ALLRS                     P + +  C    
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 279 ---------LIDGLFRAKRYDEAYA---------------WYR----------------- 297
                    L+ GL R  + D A A               W                   
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 298 --KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + +  DVV Y  ++ G   AG+V  A  +L  M+E G+ P+   Y   I  +C 
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              +++A  L   + +   L +  T + L+ G+CR+G   +A  LF +M+K G  P+   
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVT 311

Query: 416 FNALIDGLCKAGELEKANLLFYKM--------------------EIGKNPTL--FLRLSQ 453
           +  LID L KAG  ++   L  +M                    + GK   +   LR + 
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   +  +   +++  C A  + +A ++L+++ E    P+++T++S+INGF K G ++
Sbjct: 372 SDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +  + ++ +G+ P+ VTYGTLI+G  +   ++ A  ++  M   G   +  +  SL+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLV 491

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
               +  K   A +L+    +D SG     D  +  + I+   + G++  A +       
Sbjct: 492 NGLRQNGKIEEAMALF----KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK----FGQ 543

Query: 629 KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP---SCVKLIHGLC 681
           +L D  + P    Y +++  LC  G+ KEA    S+L E + +   P   +   +I   C
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCILGKFKEAK---SILTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           ++G    A+   L+ +K   I +P +  Y  L+  L  +   +K  A +LL  M S G+
Sbjct: 601 RKGETAKALK-LLHEMKMSSI-KPNLITYNTLVAGLFGTGAVEK--AKYLLNEMVSAGF 655



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 142/319 (44%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E++  ++      +  L++G +  G  EKA     +M      P    +  VL    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   + L ++  M+      +I  ++ L+  L   G T  A  +L+EM   GI P+  T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  +I G C+ +  D A+  + +M     SP+   +N LL G   + R+ EA  +L   E
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P   +Y  L+ G  +     EA   Y +M  +   P V  Y  +I   ++AG + 
Sbjct: 792 KSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +L  DM++RG+ P +  Y+ L+ G+  +    + +    ++ ++   P+  T + + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 386 CGMCRNGMVDDAQKLFNKM 404
               + GM   AQ+L   +
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 113/242 (46%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
             D+ +YN +L +     +   A  V  EM+     P+ +TF+ LI G  KS   + A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
              +M  + I PN  T+  ++ GL  + R  EA  + ++M+ SG  P+ + Y+ L+ G  
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHG 810

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K     EA+ L       GFVP++ +Y+ LI    +A    +A   ++ M +  + P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y +++ G S      +  K L DM+E+G  P     + + + F   G+  QA+ L   +
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930

Query: 370 WK 371
           ++
Sbjct: 931 YR 932



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N F  Y Q L +  S N++     F  L+ G   VG   +A     +M++   +P+   Y
Sbjct: 747 NAFATYAQMLHQNISPNIAT----FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           + ++    ++   + A+ +Y EMV    +P + T++ LI+  +K+G    A ++  +M +
Sbjct: 803 DILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+ P   TY I++SG  +I    E  +    MK+ G SP     + +   F K     +
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 257 ALALLRSF 264
           A  LL++ 
Sbjct: 923 AQRLLKNL 930


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 265/604 (43%), Gaps = 92/604 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D     LD ++   V      +   I  Y +    E+A + +  M       DV   +A+
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSAL 280

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +    R   F  A A++ EM K+   PN VT+  LI+ L+K+G+ +  + +L EM  RG+
Sbjct: 281 VAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGV 340

Query: 200 L-----------------------------------PNKFTYTIVISGLCQINRADEAYR 224
           +                                   PN  TYT++I  LC+ +  DEA +
Sbjct: 341 VMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQ 400

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++   SP+ V +++++NGF K   +D+A    R  ++ G  P + +Y  LIDG F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD----------- 333
           + +  D A   Y  M  E ++ +  +   ++ GL + GK+++AM L  D           
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 334 ------------------------MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                   + +R ++PD   YN  I   C LG   +A+S   E+
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL ++M+ +   P++  +N L+ GL   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 430 EKANLLFYKM-EIGKNPTLFL--RLSQGGNR---------VH----------DKASLQTM 467
           EKA  L  +M   G +P+     R+ Q  ++         +H          D     T+
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C  G+  KA  +L ++  SG  PD IT+N+LI G CK  +++ A   + ++  + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+ V R  +A  +  +M ++G  P+   Y  L T   ++     A  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 588 LWLQ 591
           L+ +
Sbjct: 821 LYCE 824



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 169/644 (26%), Positives = 275/644 (42%), Gaps = 26/644 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G+ + G  + A      MKE    P+V  Y   +    R +    A  +Y  MV
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   L ++VT S L+ GL + G+   A  +  EM + G  PN  TY  +I  L +  R  
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E   L  +M   G   D V Y AL++   K  + DE    LR    D   P   +Y+ LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L +A   DEA     +M E+ I P+VV +  +I G  + G +  A +    M+ERGI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI GF      D A  +  ++       N      L+ G+ +NG +++A  L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F     +G       +  LIDGL KAG++  A       + G+   L  R     N + D
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTA------FKFGQE--LMDR-----NMLPD 553

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                  +   C  G   +A   L ++   G  PD  TYN++I   C+ G    ALKL  
Sbjct: 554 AVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+++  ++P+ +TY TL+ GL      E A  +  +M   G +PS   ++ ++    + R
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
           +  +   +  +++ +     D ++ +  ++     G    A   L EM        +AP 
Sbjct: 674 RLDVILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS----GIAPD 728

Query: 639 TI----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           TI     ++G C+   +  A   ++ ++         +   L+ GL   G +  A  V +
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
              K+G  L P    Y + +    K + KV A  L C M   G+
Sbjct: 789 EMEKSG--LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGF 830



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 263/561 (46%), Gaps = 18/561 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +++ ++ LI G  + G T  A+ + D MT +G+  +   Y  +++G C+  + D A  + 
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             MK++G  P+   Y   +  +C+ + V+EA  L     ++G +  + + S L+ GL R 
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R+ EAYA +R+M +    P+ V Y  +I  L++AG+ K+ + LL +M  RG+V D   Y
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            AL+      G  D+ +         +  PN  T+T+LI  +C+   VD+A+++  +ME+
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
               P+V  F+++I+G  K G L+KA      M E G NP +               +  
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV--------------TYG 453

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T+++ +        A ++   +   G   +    +SL+NG  + G I  A+ LFK+    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL  D V Y TLI+GL +      AF+   ++      P   VY   +   C   KF  A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            S +L  +R++  + D+S  +  I    +KGE   A++ L EM        L  Y   + 
Sbjct: 574 KS-FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GL   G V++A  + + +V      +  +  +++    +   LD+ +D+  + +  G   
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 704 RPRVCNYLLRSLLFSKDNKKV 724
              V N LL+ L +    +K 
Sbjct: 693 DITVYNTLLQVLCYHGMTRKA 713



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 242/559 (43%), Gaps = 62/559 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K +  D   Q L E+   ++S     F  +I+G+ K G  +KA E    MKE
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y  +++  F+ Q    AL VY++M+      N      L+NGL ++GK E 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  + +  G+  +   YT +I GL +      A++   ++ D    PD V YN  +N
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C L +  EA + L      G  P   +Y+ +I    R     +A     +M    I+P
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP------------------------- 341
           +++ Y  ++ GL   G V+ A  LL++M   G  P                         
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 342 ----------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                     D   YN L++  C  G+  +A  +  E+      P+T TF  LI G C++
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLF 448
             +D+A   + +M      P++  FN L+ GL   G + +A  +  +ME   +  N   +
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             L+ G  +  +K                 +A ++  ++   G +P + TYN+LI+ F K
Sbjct: 803 DILATGHGKQSNKV----------------EAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP-- 566
            G +  A +LFK++Q +G+ P S TY  L++G  R+    +  +    M + G +PS   
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 567 ------AVYKSLMTWSCRR 579
                 A  K  MTW  +R
Sbjct: 907 LSFICRAFSKPGMTWQAQR 925



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 173/405 (42%), Gaps = 35/405 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K       ++   EL   N+   + V+ V I+    +G  ++A     +M+ 
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PD   YN ++    RK     AL + +EM   +  PN++T++ L+ GL  +G  E 
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD-------------------------- 220
           A  +L+EM   G  P+  T+  V+    Q  R D                          
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 221 ---------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                    +A  +  +M  SG +PD + +NAL+ G CK   +D A A           P
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ L+ GL    R  EA     +M +  +EP+ + Y ++  G  +     +AM+L 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M  +G VP    YNALI  F   G++ QA+ L  ++ KR   P + T+ IL+ G  R 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
               + +K    M++ G  PS G  + +     K G   +A  L 
Sbjct: 883 RNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLL 927



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 253/599 (42%), Gaps = 112/599 (18%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRS--------------FEKDGFVPRLGSYSC---- 278
           D  + NALL   C+LR +  A+ALLRS                     P + +  C    
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 279 ---------LIDGLFRAKRYDEAYA---------------WYR----------------- 297
                    L+ GL R  + D A A               W                   
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 298 --KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + +  DVV Y  ++ G   AG+V  A  +L  M+E G+ P+   Y   I  +C 
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              +++A  L   + +   L +  T + L+ G+CR+G   +A  LF +M+K G  P+   
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 416 FNALIDGLCKAGELEKANLLFYKM--------------------EIGKNPTL--FLRLSQ 453
           +  LID L KAG  ++   L  +M                    + GK   +   LR + 
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   +  +   +++  C A  + +A ++L+++ E    P+++T++S+INGF K G ++
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +  + ++ +G+ P+ VTYGTLI+G  +   ++ A  ++  M   G   +  +  SL+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
               +  K   A +L+    +D SG     D  +  + I+   + G++  A +       
Sbjct: 492 NGLRQNGKIEEAMALF----KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK----FGQ 543

Query: 629 KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP---SCVKLIHGLC 681
           +L D  + P    Y +++  LC  G+ KEA    S L E + +   P   +   +I   C
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAK---SFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           ++G    A+   L+ +K   I +P +  Y  L+  L  +   +K  A +LL  M S G+
Sbjct: 601 RKGETAKALK-LLHEMKMSSI-KPNLITYNTLVAGLFGTGAVEK--AKYLLNEMVSAGF 655



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 141/319 (44%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L E++  ++      +  L++G +  G  EKA     +M      P    +  VL    +
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   + L ++  M+      +I  ++ L+  L   G T  A  +L+EM   GI P+  T
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           +  +I G C+ +  D A+  + +M     SP+   +N LL G   + R+ EA  +L   E
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P   +Y  L  G  +     EA   Y +M  +   P V  Y  +I   ++AG + 
Sbjct: 792 KSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMT 851

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +L  DM++RG+ P +  Y+ L+ G+  +    + +    ++ ++   P+  T + + 
Sbjct: 852 QAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFIC 911

Query: 386 CGMCRNGMVDDAQKLFNKM 404
               + GM   AQ+L   +
Sbjct: 912 RAFSKPGMTWQAQRLLKNL 930



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
             D+ +YN +L +     +   A  V  EM+     P+ +TF+ LI G  KS   + A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
              +M  + I PN  T+  ++ GL  + R  EA  + ++M+ SG  P+ + Y+ L  G  
Sbjct: 751 TYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHG 810

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K     EA+ L       GFVP++ +Y+ LI    +A    +A   ++ M +  + P   
Sbjct: 811 KQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSC 870

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y +++ G S      +  K L DM+E+G  P     + + + F   G+  QA+ L   +
Sbjct: 871 TYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930

Query: 370 WK 371
           ++
Sbjct: 931 YR 932


>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
          Length = 665

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 185/711 (26%), Positives = 292/711 (41%), Gaps = 129/711 (18%)

Query: 17  PIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAV---ISML 73
            +E  LE L   L    V  V+    +  +  RF+ WA  R     + +N A+   IS+L
Sbjct: 78  SVELELEGLHVELDPFVVNKVLRGLSDSGMAVRFYWWAESRPGF--YHNNFAIAYIISLL 135

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
              + F L  + L  +RS  V+    ++ VL++GY + G  +  +E+F +M    C+   
Sbjct: 136 FVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFG 195

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             YN  + +                M+K NC  ++V                   K  + 
Sbjct: 196 VDYNRFIGV----------------MIK-NCCFDLVE------------------KYYNM 220

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
              +G     FTY+  I+ LCQ NR +    L   M   GC PDF A N  ++  C   R
Sbjct: 221 ALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNR 280

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + +AL ++      G  P + +Y+ ++  L   +R+ EA   + +M    ++PDVV  G 
Sbjct: 281 LYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGA 340

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL +  KV +A +L S M    I  +   YNALI GF   G +++A      + +  
Sbjct: 341 LIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNG 400

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  T+ IL+   C  GM D A+ L  KME +G  P    +N L+ GLCKA +L+K  
Sbjct: 401 CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDK-- 458

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                                                         A+  +    E G  
Sbjct: 459 ----------------------------------------------AFAFVSDHMEVGGF 472

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
            DI++ N LI+ FC+   +N AL LFKE+  KG++ D+VTYG LINGL  +     A  +
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           F QM      P+  VY  ++   C+   F  A  ++ Q  +     D  +  ++  +L K
Sbjct: 533 FDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGK 592

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
                                               +  EAL++F    E +     P  
Sbjct: 593 SS----------------------------------RAVEALDLFK---EMRTKGVEPDN 615

Query: 674 VK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
           +    +I GL   G   LA +++ Y ++NG IL   V   L+ S+L  K+N
Sbjct: 616 LTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLI-SVLKLKNN 665



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 137/591 (23%), Positives = 248/591 (41%), Gaps = 40/591 (6%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFL----K 228
           ++ GLS SG   +A++       R G   N F    +IS L      D+ + L L    +
Sbjct: 98  VLRGLSDSG---MAVRFYWWAESRPGFYHNNFAIAYIISLLF----VDDNFALLLEFLGR 150

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           ++  G +     Y  LL G+ +  + D  +         G       Y+  I  + +   
Sbjct: 151 VRSQGVAFHRSLYRVLLAGYARAGKFDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCC 210

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           +D    +Y     +        Y   I  L ++ +++   +LL+DM + G  PD +  N 
Sbjct: 211 FDLVEKYYNMALAKGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNI 270

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            +   C    L  A  +  ++  + + P+  T+T ++  +C +    +A  L+ +M + G
Sbjct: 271 YVHYLCGHNRLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRG 330

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P V    ALI GLCK  ++++A  L  +M      TL ++L        + +    ++
Sbjct: 331 LKPDVVACGALIFGLCKNQKVDEAFELASRM-----LTLDIQL--------NVSIYNALI 377

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             +  AG I KAYK +  +  +G  PD++TYN L+N +C +G  + A  L +++++ G+ 
Sbjct: 378 SGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVN 437

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD  +Y  L+ GL +  + + AF       + G          L+   CR +K + A +L
Sbjct: 438 PDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNL 497

Query: 589 WLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF-KLNDFQLAP----YTIWLI 643
                +++  +  ++       L  G        L E  F ++ + ++ P    Y I L 
Sbjct: 498 ----FKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLH 553

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            LC+ G  K A  IF  + + +  V+P +     LI+ L K      A+D+F      G 
Sbjct: 554 NLCKVGHFKHAQKIFWQMTQKE--VSPDTVTFNTLIYWLGKSSRAVEALDLFKEMRTKGV 611

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
                   Y++  LL   + K   AY +   M   G  LD  +  +  S+L
Sbjct: 612 EPDNLTFRYIISGLL--DEGKATLAYEIWEYMMENGIILDRDVSERLISVL 660


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 288/626 (46%), Gaps = 23/626 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V   +  + VL+ G  K    ++A+E    M       D   Y  ++    R + 
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
             +AL + ++M++L  +P+    S +I+ L K    E A  +  ++   G++PN F Y  
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I  LC+  R D+A RLF +M   G  P+ V Y  L++  CK   +++AL L       G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               +  Y+ LI+G  +    D A      M +E + P    Y  +I GL   G +   M
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L  +M ERGI  + Y + ALI GFC    +D+A  L  ++   + +PN  TF ++I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +  A +L+++M + G  P    + +LI GLC    + KAN     +E        
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-------- 575

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    V +  SL  ++  +   G   + Y +  ++A  G   D++++  ++    K
Sbjct: 576 -----NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             +   +  LF+E++ +G++PD + Y  +I+ L + +    A   + QM  +G +P+   
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVT 690

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           +  L+   C+      A  L  + L      +  +    ++ F  +G++E A + L    
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAM 749

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRG 684
            + +   +  + I + GLC+ G+++EA+++ S + E       P C+    +IH LCK G
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG---FSPDCISYSTIIHELCKMG 806

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++ A +++   L  G  L+P V  Y
Sbjct: 807 DINKAFELWNEMLYKG--LKPDVVAY 830



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 232/489 (47%), Gaps = 14/489 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D++R   + V    +  LI+GY K G  ++A      M +    P    Y+ ++    R
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                  + ++ EM +     N  TF+ LING  K  K + A ++ D+M    ++PN+ T
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + ++I G C +    +A++L+ +M + G  PD   Y +L++G C    V +A   +   E
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               V    S + L+ G FR  R+ E Y  + +M    ++ D+V + +++    +    +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +  L  +M+E+G+ PD   Y  +I        + QA +   ++      PNT T T+LI
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C++G +  A+ L  +M      P+   +N  +D     G++EKA  L   M  G   
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               S   +++  C AG I +A  ++ ++ ESG  PD I+Y+++I+ 
Sbjct: 756 SI--------------VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHE 801

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK+G+IN A +L+ E+  KGL+PD V Y   I         + A  I+  M ++G  P+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 566 PAVYKSLMT 574
              Y++L++
Sbjct: 862 WDTYRALLS 870



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 258/609 (42%), Gaps = 54/609 (8%)

Query: 93  NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           N+ V +D   +  L+ G+ ++ + E AL     M      P     + +++   +K+L  
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A ++  ++  L  +PN+  ++ LI+ L K+ + + A ++  EM  RG+ PN+ TY I+I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC+    ++A  LF KM+D G       YN+L+NG+CK   +D A  LL    K+G  
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 271 PRLGSYSCLIDGLFRA-----------------------------------KRYDEAYAW 295
           P   SYS LI GL R                                    K+ DEA   
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + KM +  + P+ V + VMI G    G ++ A +L   M E G+ PD Y Y +LI G C 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A     ++    ++ N  + T L+ G  R G   +   L+++M   G    +  
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F  ++    K  + EK+ +LF +M E G  P              D      M++     
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKP--------------DDIFYTCMIDALSKE 666

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A     Q+   G  P+ +T+  LIN  CK G +  A  L KE+    + P+  TY
Sbjct: 667 ENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTY 726

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
              ++        E A  +   M Q G   S   +  L+   C+  K   A  L  +   
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITE 785

Query: 595 DISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                D  S  +I  E  + G++  A +   EM +K     +  Y I++      G+  +
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 654 ALNIFSVLV 662
           AL I++ ++
Sbjct: 846 ALGIYTNMI 854



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 240/552 (43%), Gaps = 89/552 (16%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I  L K   FD   +   E+    +      + +LI    K G  E AL  F 
Sbjct: 339 FAYN-ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM++   +  VY YN+++N   ++     A  +   MVK    P   ++S LI GL ++G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                +++  EM +RGI  N +T+T +I+G C+  + DEA RLF KM DS   P+ V +N
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL------------------- 283
            ++ G+C +  + +A  L     + G  P   +Y  LI GL                   
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENS 577

Query: 284 ----------------FRAKRYDEAYA-W------------------------------- 295
                           FR  R+ E Y  W                               
Sbjct: 578 YAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637

Query: 296 ---YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R+M E+ ++PD + Y  MI  LS+   +  A+     M   G  P+T  +  LI  
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINN 697

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G L  A  L  E+   + LPN  T+   +      G ++ A+ L + M + G   S
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +  FN LI GLCKAG++++A  L  K+ E G +P              D  S  T++ + 
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMSKITESGFSP--------------DCISYSTIIHEL 802

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV-GNINGALKLFKELQLKGLRPD 530
           C  G I+KA+++  ++   G  PD++ YN  I  +C V G  + AL ++  +   G++P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 531 SVTYGTLINGLQ 542
             TY  L++G+ 
Sbjct: 862 WDTYRALLSGIS 873



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 192/412 (46%), Gaps = 15/412 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  T S ++  L K  +  +A  + D+M Q G+  +++ YT  I   C+    D A  L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           ++M+  G     V YN L+ G CK  RV EA+ +       G      +Y  L+ G  R 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +  + A      M      P       MI  L +   V++A  L   + + G+VP+ + Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NALI   C     D A  L  E+  R   PN  T+ ILI  +C+ GM++DA  LF+KM  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G   +V  +N+LI+G CK G L++A  L   M + G  PT               AS  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT--------------AASYS 447

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++   C  G +    ++  ++AE G   +  T+ +LINGFCK   ++ A +LF ++   
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + P+ VT+  +I G   V     AF+++ QM + G  P    Y+SL++  C
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 214/466 (45%), Gaps = 22/466 (4%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  N++T + ++  L +I +   A  LF KM  SG   D   Y A +  +C+ R +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   E +G       Y+ L+ GL +  R  EA      M    +  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +++ A+++  DM   G VP     + +I       L+++A SL  ++     +PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  LI  +C+N   DDA +LF +M   G  P+   +  LI  LCK G +E A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           KM + G   T++                 +++  YC  G + +A  +L  + + G  P  
Sbjct: 398 KMRDKGIKVTVY--------------PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            +Y+ LI G C+ G+++  ++L +E+  +G+  ++ T+  LING  +  + ++A R+F +
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGE 615
           M  +   P+   +  ++   C       AF L+ Q +      D+ + +S I        
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563

Query: 616 VENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           V  A + + +++     LN+F L   T  L G  ++G+  E  +++
Sbjct: 564 VSKANEFVADLENSYAVLNNFSL---TALLYGFFREGRFTETYHLW 606



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 116/295 (39%), Gaps = 69/295 (23%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S +A++    +   F   +   DE+    V +    F +++    K  D EK+   F +M
Sbjct: 585 SLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           KE   +PD   Y  +++   +++  + AL  + +MV     PN VT ++LIN L KSG  
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYL 704

Query: 185 EVAIKMLDEMTQRGILPNKFTYT----------------------------------IVI 210
             A  +  EM    +LPNKFTY                                   I+I
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILI 764

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV---------------- 254
            GLC+  +  EA  L  K+ +SG SPD ++Y+ +++  CK+  +                
Sbjct: 765 KGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 824

Query: 255 -------------------DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                              D+AL +  +  + G  P   +Y  L+ G+     YD
Sbjct: 825 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 265/604 (43%), Gaps = 92/604 (15%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D     LD ++   V      +   I  Y +    E+A + +  M       DV   +A+
Sbjct: 221 DAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSAL 280

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           +    R   F  A A++ EM K+   PN VT+  LI+ L+K+G+ +  + +L EM  RG+
Sbjct: 281 VAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGV 340

Query: 200 L-----------------------------------PNKFTYTIVISGLCQINRADEAYR 224
           +                                   PN  TYT++I  LC+ +  DEA +
Sbjct: 341 VMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQ 400

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           + L+M++   SP+ V +++++NGF K   +D+A    R  ++ G  P + +Y  LIDG F
Sbjct: 401 VLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFF 460

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD----------- 333
           + +  D A   Y  M  E ++ +  +   ++ GL + GK+++AM L  D           
Sbjct: 461 KFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHV 520

Query: 334 ------------------------MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
                                   + +R ++PD   YN  I   C LG   +A+S   E+
Sbjct: 521 NYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                 P+  T+  +I   CR G    A KL ++M+ +   P++  +N L+ GL   G +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640

Query: 430 EKANLLFYKM-EIGKNPTLFL--RLSQGGNR---------VH----------DKASLQTM 467
           EKA  L  +M   G +P+     R+ Q  ++         +H          D     T+
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTL 700

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C  G+  KA  +L ++  SG  PD IT+N+LI G CK  +++ A   + ++  + +
Sbjct: 701 LQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P+  T+ TL+ GL+ V R  +A  +  +M ++G  P+   Y  L T   ++     A  
Sbjct: 761 SPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMR 820

Query: 588 LWLQ 591
           L+ +
Sbjct: 821 LYCE 824



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 274/647 (42%), Gaps = 32/647 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G+ + G  + A      MKE    P+V  Y   +    R +    A  +Y  MV
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +   L ++VT S L+ GL + G+   A  +  EM + G  PN  TY  +I  L +  R  
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGK 326

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E   L  +M   G   D V Y AL++   K  + DE    LR    D   P   +Y+ LI
Sbjct: 327 ELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLI 386

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D L +A   DEA     +M E+ I P+VV +  +I G  + G +  A +    M+ERGI 
Sbjct: 387 DALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN 446

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y  LI GF      D A  +  ++       N      L+ G+ +NG +++A  L
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMAL 506

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ---GGNR 457
           F     +G       +  LIDGL KAG++               PT F +  Q     N 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDM---------------PTAF-KFGQELMDRNM 550

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
           + D       +   C  G   +A   L ++   G  PD  TYN++I   C+ G    ALK
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L  E+++  ++P+ +TY TL+ GL      E A  +  +M   G +PS   ++ ++    
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACS 670

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
           + R+  +   +  +++ +     D ++ +  ++     G    A   L EM        +
Sbjct: 671 QSRRLDVILDIH-EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS----GI 725

Query: 636 APYTI----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           AP TI     ++G C+   +  A   ++ ++         +   L+ GL   G +  A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           V +   K+G  L P    Y + +    K + KV A  L C M   G+
Sbjct: 786 VLIEMEKSG--LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGF 830



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 263/560 (46%), Gaps = 18/560 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +++ ++ LI G  + G T  A+ + D MT +G+  +   Y  +++G C+  + D A  + 
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             MK++G  P+   Y   +  +C+ + V+EA  L     ++G +  + + S L+ GL R 
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R+ EAYA +R+M +    P+ V Y  +I  L++AG+ K+ + LL +M  RG+V D   Y
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            AL+      G  D+ +         +  PN  T+T+LI  +C+   VD+A+++  +ME+
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
               P+V  F+++I+G  K G L+KA      M E G NP +               +  
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNV--------------VTYG 453

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T+++ +        A ++   +   G   +    +SL+NG  + G I  A+ LFK+    
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGS 513

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL  D V Y TLI+GL +      AF+   ++      P   VY   +   C   KF  A
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            S +L  +R++  + D+S  +  I    +KGE   A++ L EM        L  Y   + 
Sbjct: 574 KS-FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           GL   G V++A  + + +V      +  +  +++    +   LD+ +D+  + +  G   
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 704 RPRVCNYLLRSLLFSKDNKK 723
              V N LL+ L +    +K
Sbjct: 693 DITVYNTLLQVLCYHGMTRK 712



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 230/522 (44%), Gaps = 54/522 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K +  D   Q L E+   ++S     F  +I+G+ K G  +KA E    MKE
Sbjct: 383 TVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE 442

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+V  Y  +++  F+ Q    AL VY++M+      N      L+NGL ++GK E 
Sbjct: 443 RGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEE 502

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  + +  G+  +   YT +I GL +      A++   ++ D    PD V YN  +N
Sbjct: 503 AMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFIN 562

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C L +  EA + L      G  P   +Y+ +I    R     +A     +M    I+P
Sbjct: 563 CLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP------------------------- 341
           +++ Y  ++ GL   G V+ A  LL++M   G  P                         
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682

Query: 342 ----------DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                     D   YN L++  C  G+  +A  +  E+      P+T TF  LI G C++
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLF 448
             +D+A   + +M      P++  FN L+ GL   G + +A  +  +ME   +  N   +
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTY 802

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
             L+ G  +  +K                 +A ++  ++   G +P + TYN+LI+ F K
Sbjct: 803 DILATGHGKQSNKV----------------EAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            G +  A +LFK++Q +G+ P S TY  L++G   + RE+ +
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 253/599 (42%), Gaps = 112/599 (18%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRS--------------FEKDGFVPRLGSYSC---- 278
           D  + NALL   C+LR +  A+ALLRS                     P + +  C    
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 279 ---------LIDGLFRAKRYDEAYA---------------WYR----------------- 297
                    L+ GL R  + D A A               W                   
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 298 --KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M  + +  DVV Y  ++ G   AG+V  A  +L  M+E G+ P+   Y   I  +C 
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              +++A  L   + +   L +  T + L+ G+CR+G   +A  LF +M+K G  P+   
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 416 FNALIDGLCKAGELEKANLLFYKM--------------------EIGKNPTL--FLRLSQ 453
           +  LID L KAG  ++   L  +M                    + GK   +   LR + 
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
             N   +  +   +++  C A  + +A ++L+++ E    P+++T++S+INGF K G ++
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A +  + ++ +G+ P+ VTYGTLI+G  +   ++ A  ++  M   G   +  +  SL+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLV 491

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMDF 628
               +  K   A +L+    +D SG     D  +  + I+   + G++  A +       
Sbjct: 492 NGLRQNGKIEEAMALF----KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFK----FGQ 543

Query: 629 KLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP---SCVKLIHGLC 681
           +L D  + P    Y +++  LC  G+ KEA    S L E + +   P   +   +I   C
Sbjct: 544 ELMDRNMLPDAVVYNVFINCLCMLGKFKEAK---SFLTEMRNMGLKPDQSTYNTMIVSHC 600

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
           ++G    A+   L+ +K   I +P +  Y  L+  L  +   +K  A +LL  M S G+
Sbjct: 601 RKGETAKALK-LLHEMKMSSI-KPNLITYNTLVAGLFGTGAVEK--AKYLLNEMVSAGF 655



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 12/285 (4%)

Query: 15  VTPIEPALEPLLPFLSKTTVTSVIMKTK---NPQVGFRFFIWAAKRKRLRSFASNSAVIS 71
           ++ I+P L      ++    T  + K K   N  V   F   +   +R+    S S  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLD 676

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           ++L     D++   ++     +++V + +  VL   Y+  G   KA     +M      P
Sbjct: 677 VIL-----DIHEWMMNAGLHADITVYNTLLQVLC--YH--GMTRKATVVLEEMLGSGIAP 727

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D   +NA++    +      A A Y +M+  N  PNI TF+ L+ GL   G+   A  +L
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            EM + G+ PN  TY I+ +G  + +   EA RL+ +M   G  P    YNAL++ F K 
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKA 847

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             + +A  L +  +K G  P   +Y  L+ G +   R  ++   Y
Sbjct: 848 GMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTY 892


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 147/612 (24%), Positives = 283/612 (46%), Gaps = 35/612 (5%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           TV + + +     V   FF W     + R F     V +                 L + 
Sbjct: 107 TVVASLAQEAGSVVSLSFFNWVIGFSKFRHFMRLYIVCATTF--------------LNND 152

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N+   ++V   ++  + ++G  ++A+    +M+         I N V+++A        A
Sbjct: 153 NLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYA 212

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             V+ EM+    +P+  ++ L++ G  + G+     + L +M +RG   +  T T++IS 
Sbjct: 213 EKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMIST 272

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
             +    + A+  F K    G +P+ + +++L+NG CK+  + +A  +L    + G+ P 
Sbjct: 273 FSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPN 332

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + +++ LIDGL +    ++A+  + K+   +  +P+V  Y  MI G  +  K+  A  LL
Sbjct: 333 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLL 392

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M+E+G+VP+T  Y  LI G C  G   +A  L   + K    PN  T+  +I G+C+ 
Sbjct: 393 IRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKK 452

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G   +A KL  +  K+G       +  LI   C+  + ++A  +F +M ++G  P     
Sbjct: 453 GRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQP----- 507

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   ++  +C    + ++ K+  +    G LP   TY S+I G+C+ G
Sbjct: 508 ---------DMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           +I+ A+K F +++  G +PDS+TYG LI+GL    + ++A +++  M  NG +P      
Sbjct: 559 HISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRV 618

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA---IQGLLEMD 627
           +L    C++   + A  +  +  + +  R   ++  I +   + +V  A      LL+ D
Sbjct: 619 TLAYEYCKQGDSATAMIILERLEKKLWIRTVNTL--IRKLCSEKKVGVAALFFHKLLDKD 676

Query: 628 FKLNDFQLAPYT 639
             ++   LA +T
Sbjct: 677 LNVDRITLAAFT 688



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 244/548 (44%), Gaps = 53/548 (9%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++   S+ GK + A+ M+ EM   G++        VI     +   D A ++F +M D  
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD  +Y  ++ G+C++ R+ +    L+   + G+     + + +I         + A+
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            +++K  +  + P+++ +  +I GL + G +K A ++L +M  +G  P+ Y + ALI G 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 354 CDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           C  G  ++A  L +++ + D+  PN +T+T +I G C+   ++ A+ L  +M++ G  P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              +  LIDG CKAG   +A  L   M + G  P +F              +   +++  
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIF--------------TYNAIIDGL 449

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G   +AYK+L +  +SG   D +TY  LI+ FC+  +   AL +F  +   GL+PD 
Sbjct: 450 CKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDM 509

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            TY  LI    R  + E++ ++F +    G  P+   Y S++   CR    S A   +  
Sbjct: 510 HTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIK-FFH 568

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
            +RD   + D                                    Y   + GLC + ++
Sbjct: 569 KMRDYGCKPDS---------------------------------ITYGALISGLCNESKL 595

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            EA  ++  +++        + V L +  CK+G    AM +     K  +I   R  N L
Sbjct: 596 DEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWI---RTVNTL 652

Query: 712 LRSLLFSK 719
           +R L   K
Sbjct: 653 IRKLCSEK 660



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 176/435 (40%), Gaps = 89/435 (20%)

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           M+R  SE GK+K+A+ ++ +M+  G+V      N +I         D A +L        
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVI---------DVALAL-------- 206

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
                             G VD A+K+F++M      P    +  ++ G C+ G +   +
Sbjct: 207 ------------------GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVD 248

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
                M             + G  V D A+   M+  +   G +++A+    +  + G  
Sbjct: 249 RWLKDM------------IERGYAV-DNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLN 295

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P++I ++SLING CK+G+I  A ++ +E+  KG +P+  T+  LI+GL +    E AFR+
Sbjct: 296 PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL 355

Query: 554 FGQMPQ-NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           F ++ + +   P+   Y  ++   C+  K + A  L ++            MK      +
Sbjct: 356 FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIR------------MK------E 397

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP- 671
           +G V N                   YT  + G C+ G    A  +  ++   K   TP  
Sbjct: 398 QGLVPNT----------------NTYTCLIDGHCKAGNFGRAYELMDLM--GKEGFTPNI 439

Query: 672 -SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
            +   +I GLCK+G    A  +    LK+G          L+       DNK+  A  + 
Sbjct: 440 FTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQ--ALAIF 497

Query: 731 CRMKSVGYDLDACLY 745
            RM  VG   D   Y
Sbjct: 498 SRMFKVGLQPDMHTY 512



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 7/271 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K   F   ++ L       +      + +LIS + +  D ++AL  F +M +
Sbjct: 443 NAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFK 502

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPD++ YN ++    R++    +  ++ E V L  LP   T++ +I G  + G    
Sbjct: 503 VGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISS 562

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AIK   +M   G  P+  TY  +ISGLC  ++ DEA +L+  M D+G SP  V    L  
Sbjct: 563 AIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAY 622

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +CK      A+ +L   EK  ++  + +   LI  L   K+   A  ++ K+ ++ +  
Sbjct: 623 EYCKQGDSATAMIILERLEKKLWIRTVNT---LIRKLCSEKKVGVAALFFHKLLDKDLNV 679

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           D +          E+ K      L+SD+ ER
Sbjct: 680 DRITLAAFTTACYESNK----FALVSDLSER 706


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 267/604 (44%), Gaps = 116/604 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ------LFLLAL 153
           +F  L+  Y    D   A +   +M    C P   +YN  +     ++      L  LA 
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +Y EM+  NC+ N V  +     L   GK + A +++ EM ++G +P+  TY+ VI+ L
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---------------- 257
           C   + ++A+ LF +MK  G +PD   Y  L++ FCK   +++A                
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 258 ---LALLRSFEKDGFVPRLG----------------SYSCLIDGLFRAKRYDEAYAWYRK 298
               AL+ ++ K   VP+                  +Y  L+DGL +A    +A+  Y K
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 299 MF----------------EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           +                    + P+VV YG ++ GL +A KV  A +LL  M   G  P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ALI GFC  G +D A+ + +++ K   LP+ HT+T LI  M ++G +D A K+ +
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPT--------------- 446
           +M K  C P+V  + A+IDGLC+ GE EKA  LL    E G +P                
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 447 -------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA------------------Y 481
                  LF ++S+ G    +  + + ++   C AGL+ KA                  Y
Sbjct: 599 KIDLSLDLFTQMSRKGCS-PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 482 K---------------ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL-- 524
           +               IL ++   G +P    Y  LI+ F K G +  A++L KE+    
Sbjct: 658 RCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 717

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
             ++ D+  Y +LI  L    + E+AFR++ +M + G  P  +V+  L+      +K+  
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDE 777

Query: 585 AFSL 588
           A  L
Sbjct: 778 ALQL 781



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 232/504 (46%), Gaps = 60/504 (11%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI+ L      +  +    E++   V+     + +LI  + K G  E+A   F +
Sbjct: 289 STYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE 348

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C P V  Y A+++   + +    A  +++ MV   C PN VT+  L++GL K+G 
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
              A ++  ++                 +  + PN  TY  ++ GLC+ ++ D A+ L  
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  SGC P+ + Y+AL++GFCK  ++D A  +     K G++P + +Y+ LID +F+  
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     +M ++   P+VV Y  MI GL   G+ + A+KLLS M E+G  P+   Y 
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL------- 400
           ALI G    G +D +  L  ++ ++   PN  T+ +LI  +C  G++D A+ L       
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 401 --------------------------FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
                                       +ME  G  P   ++  LID   KAG LE A  
Sbjct: 649 YWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA-- 706

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
               ME+ K       +    +   D     ++++  C A  + +A+++  ++   G +P
Sbjct: 707 ----MELHKE-----MMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757

Query: 495 DIITYNSLINGFCKVGNINGALKL 518
           ++  +  LI G  +V   + AL+L
Sbjct: 758 ELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 253/551 (45%), Gaps = 51/551 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++  + M   +C+PN+VT+  L++G  K  +     ++++ M   G  PN   +  ++ 
Sbjct: 126 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 185

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C       AY+L  +M   GC P +V YN  +   C   ++     LL   EK     
Sbjct: 186 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP-DLLDLAEK--IYG 242

Query: 272 RLGSYSCLIDGLFRAK---------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
            + + +C+++ +  A          ++D+A+   ++M  +   PD   Y  +I  L  A 
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           KV+ A  L  +M+  G+ PD Y Y  LI  FC  GL++QA+ L  E+      P   T+T
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI    +   V  A  +F++M  AGC P+   + AL+DGLCKAG + KA  ++ K+ IG
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL-IG 421

Query: 443 KNPT----LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + +     +           +  +   +V+  C A  +  A+++L  +  SG  P+ I 
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y++LI+GFCK G I+ A ++F ++   G  P   TY +LI+ + +  R + A ++  QM 
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           ++ CTP+   Y +++   CR                                   GE E 
Sbjct: 542 KDSCTPNVVTYTAMIDGLCR----------------------------------IGESEK 567

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A++ L  M+ K     +  YT  + GL + G++  +L++F+ +          +   LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 679 GLCKRGYLDLA 689
            LC  G LD A
Sbjct: 628 HLCAAGLLDKA 638



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/692 (24%), Positives = 294/692 (42%), Gaps = 113/692 (16%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +ISG  +    ++A+    +M+   C P+V  Y  +L+   +K+       +   M+   
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG----------- 212
           C PN   F+ L++          A K+L+ MT  G  P    Y I I             
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 213 ------------------------------LCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                                         LC + + D+A++L  +M   G  PD   Y+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++   C   +V++A  L +  +  G  P + +Y+ LID   +A   ++A   + +M   
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P VV Y  +I    +A +V  A  +   M + G  P+   Y AL+ G C  G + +A
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 363 RSLQVE-IWKRDS---------------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             +  + I   DS                PN  T+  L+ G+C+   VD A +L + M  
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +GC P+  +++ALIDG CKAG+++ A  +F +M + G  P+           VH   SL 
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-----------VHTYTSL- 520

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
             +++    G +  A K+L Q+ +    P+++TY ++I+G C++G    ALKL   ++ K
Sbjct: 521 --IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC-------- 577
           G  P+ VTY  LI+GL +  + + +  +F QM + GC+P+   Y+ L+   C        
Sbjct: 579 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 638

Query: 578 RRRKFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
           R     +  + W +YL+     I G     + S+              G+LE        
Sbjct: 639 RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--------------GILEEMESYGTV 684

Query: 634 QLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--------LIHGLCKRG 684
            +AP Y + +    + G+++ A+ +   ++E       PS VK        LI  LC   
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV------PSSVKTDNDMYASLIQALCLAS 738

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            ++ A  ++    + GF+    V   L++ L+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLV 770



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 274/616 (44%), Gaps = 47/616 (7%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +  GD E  L+ FG       +P    YNA++ +        L   V  EM +     + 
Sbjct: 22  HAAGDSEDPLKDFGY------RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDR 75

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T     + L K G+   A+ M++   +     +    T +ISGL + +  DEA     +
Sbjct: 76  FTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 132

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+ + C P+ V Y  LL+GF K +++     ++     +G  P    ++ L+      K 
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD------AMKLLSDMRERGIVPD 342
           Y  AY    +M      P  V+Y + I  +    K+        A K+  +M     V +
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 252

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
                   +  C +G  D+A  L  E+ ++  +P+T T++ +I  +C    V+ A  LF 
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M+  G  P V  +  LID  CKAG +E+A  LF +M  +G +PT+              
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV-------------- 358

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++  Y  A  + +A  I  ++ ++G  P+ +TY +L++G CK GNI+ A +++ +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 522 L----------------QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           L                    L P+ VTYG L++GL +  + + A  +   M  +GC P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLL 624
             VY +L+   C+  K   A  ++LQ  +        +  S I+   + G ++ A++ L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           +M        +  YT  + GLC+ G+ ++AL + S++ E        +   LI GL K G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 685 YLDLAMDVFLYTLKNG 700
            +DL++D+F    + G
Sbjct: 599 KIDLSLDLFTQMSRKG 614



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 42/366 (11%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L K +  D   + LD + S        V+  LI G+ K G  + A E F +M + 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P V+ Y ++++  F+     LA+ V  +M+K +C PN+VT++ +I+GL + G++E A
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +K+L  M ++G  PN  TYT +I GL +  + D +  LF +M   GCSP++V Y  L+N 
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 248 FCKLRRVDEA---------------------------------LALLRSFEKDGFVPRLG 274
            C    +D+A                                 L +L   E  G VP   
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAP 688

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
            Y  LID   +A R + A   +++M E    ++ D  +Y  +I+ L  A +V++A +L S
Sbjct: 689 VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYS 748

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH-------TFTILI 385
           +M  RG VP+   +  LIKG  ++   D+A  L   I     L  ++       TF +++
Sbjct: 749 EMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQIFLFTFVVIV 808

Query: 386 CGMCRN 391
            G  +N
Sbjct: 809 VGYGKN 814



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 212/527 (40%), Gaps = 50/527 (9%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +KD G  P  V YNAL+       +VD    + +   + GF     +  C    L +  R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           + +A     +   E  + D VL   MI GL EA    +AM  L  MR    +P+   Y  
Sbjct: 91  WADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ GF     L   + +   +      PN   F  L+   C       A KL N+M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 409 CFPSVGMFNALIDGLCKA----------------GELEKANLLFYKME----------IG 442
           C P   ++N  I  +C                  GE+  AN +  K+           +G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 443 KNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           K    F  + +   +  V D ++   ++   C A  + KA+ +  ++   G  PD+ TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+ FCK G I  A  LF+E++  G  P  VTY  LI+   +  +   A  IF +M   
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE-------FLQK 613
           GC P+   Y +L+   C+    S AF ++ + +      D +     E+        +  
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 614 GEVENAIQGLLEMD--FKLNDFQLAP--------YTIWLIGLCQDGQVKEALNIFSVLVE 663
           G + + +    ++D   +L D  L+         Y   + G C+ G++  A  +F  + +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           C  + +  +   LI  + K G LDLAM V    LK+     P V  Y
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS--CTPNVVTY 552



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 35/277 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F+   K   L S  + +++I  + K    DL  + L ++   + +     +  +I G  +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           +G+ EKAL+    M+E  C P+V  Y A+++   +     L+L ++ +M +  C PN VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 171 FSLLINGLSKSGKTEVA---------------------------------IKMLDEMTQR 197
           + +LIN L  +G  + A                                 + +L+EM   
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--SGCSPDFVAYNALLNGFCKLRRVD 255
           G +P    Y ++I    +  R + A  L  +M +  S    D   Y +L+   C   +V+
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           EA  L     + GFVP L  + CLI GL   K++DEA
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 154/649 (23%), Positives = 304/649 (46%), Gaps = 62/649 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL V+ EM  L C  ++ + + ++N L+++G     + + ++M + G LP+KFT  I+  
Sbjct: 192 ALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAK 251

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C++     A     +M   G   + VAY+A++NG+C++ + ++A  +L S    GF P
Sbjct: 252 AYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSP 311

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            + +Y+ L+ G    K  +EA    +++ + K +  D  ++G +I G  + G+++DA +L
Sbjct: 312 NIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARL 371

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L++M +  +  + + YN +I G+C LG + +A ++  E+      P+T+++  L+ G C+
Sbjct: 372 LNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCK 431

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP---- 445
            G+++ A + +N M + G   +   +NAL+ G C  G ++ A  L F  ++ G  P    
Sbjct: 432 KGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEIS 491

Query: 446 --TLFLRLSQGGNR---------------VHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             TL     + G                   +  +  T++   C    + +A +++ ++ 
Sbjct: 492 CSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMK 551

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           +    PDIITY +L +G+CK+G+++ A ++  EL+  G  P    + +LI G     +  
Sbjct: 552 QWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG 611

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD------------- 595
               I  +M   G +P+   Y +L+   C+      A++L+L+ +               
Sbjct: 612 KVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671

Query: 596 ----ISGRDDESMKSIEEF-------------LQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                 G+ DE+   ++               L+ G+V N I  +   +          +
Sbjct: 672 SCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIM---W 728

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
            I + GLC+ G++++A N+ + L +   +    +   LIHG    G++D+A D+    L 
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 699 NGFILRPRVCNYLLRSLLFS--KDNKKVHAYHLLCRMKSVGYDLDACLY 745
            G  L P +  Y   SL++   K  +   A  L  ++ + G   +A  Y
Sbjct: 789 VG--LTPNIVTY--NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITY 833



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 233/504 (46%), Gaps = 76/504 (15%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY K G   KA E++  M           YNA+L           AL +++ M+K  
Sbjct: 425 LVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN ++ S L++G  KSGKTE A+ +  E   RG+  N  T+  VI+GLC+I R  EA 
Sbjct: 485 IAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAE 544

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  KMK   C PD + Y  L +G+CK+  +D A  +L   E  GF P +  ++ LI G 
Sbjct: 545 ELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGH 604

Query: 284 FRAKRYDE-----------------------------------AYAWYRKMFEEKIEPDV 308
           F AK++ +                                   AY  Y +M E+ + P++
Sbjct: 605 FIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNL 664

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC----------------------- 345
            +   ++      GK  +A  +L ++    ++PD                          
Sbjct: 665 FICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSA 724

Query: 346 ---YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +N +I G C LG ++ A++L  ++  +  + +  T++ LI G   +G VD A  L +
Sbjct: 725 KIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRD 784

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
            M   G  P++  +N+LI GLCK+GEL +A  LF K+   G +P              + 
Sbjct: 785 TMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISP--------------NA 830

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++++C  G I +A+K+  ++ E G  P + TY+ LING C  G +  A+KL  +
Sbjct: 831 ITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQ 890

Query: 522 LQLKGLRPDSVTYGTLINGLQRVD 545
           +    + P+ VTY TLI G  R +
Sbjct: 891 MIENNVDPNYVTYWTLIQGYVRCE 914



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 283/643 (44%), Gaps = 43/643 (6%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           ++E+    V V    +  +++GY +VG    A      +      P++  Y  ++     
Sbjct: 266 VEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCN 325

Query: 146 KQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
           ++    A  V  E+ K   L  +   F  +ING  + G+ E A ++L+EM    +  N F
Sbjct: 326 EKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLF 385

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y I+I+G C++ R  EA+ +  +M   G  PD  +YN+L++G+CK   +++A     + 
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            ++GF     +Y+ L+ G       D+A   +  M ++ I P+ +    ++ G  ++GK 
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           + A+ L  +   RG+  +T  +N +I G C +  + +A  L  ++ +    P+  T+  L
Sbjct: 506 EKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTL 565

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGK 443
             G C+ G +D A ++ N++E  G  P++  FN+LI G   A +  K N + ++M   G 
Sbjct: 566 FSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGL 625

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           +P              +  +   ++  +C  G +H AY + +++ E G +P++   +SL+
Sbjct: 626 SP--------------NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPD--------------------------SVTYGTL 537
           + F + G  + A  + + L    + PD                           + +  +
Sbjct: 672 SCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIV 731

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I GL ++ R EDA  +   +   G       Y SL+          +AF L    L    
Sbjct: 732 IFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGL 791

Query: 598 GRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALN 656
             +  +  S I    + GE+  A+    ++  K        Y   +   C+DG + EA  
Sbjct: 792 TPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFK 851

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           +   ++E     T  +   LI+GLC +GY++ A+ +    ++N
Sbjct: 852 LKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 220/493 (44%), Gaps = 76/493 (15%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++T + +     +  +  +  L+ G+  +G  + AL  +  M +    P+    + +L+ 
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F+      AL ++ E +      N  TF+ +INGL K  +   A +++D+M Q    P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 203 KFTYTIVISGLCQINRADEAYR-----------------------------------LFL 227
             TY  + SG C+I   D A R                                   +  
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M + G SP+ VAY AL+ G+CK   +  A  L     + G VP L   S L+   +R  
Sbjct: 619 EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKG 678

Query: 288 RYDEAYAWYRKMFEEKIEPDV--------------------------VLYGVMIRGLSEA 321
           ++DEA    + +    + PD+                          +++ ++I GL + 
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL 738

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G+++DA  LL+D++++G V D + Y++LI G    G +D A  L+  +      PN  T+
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
             LI G+C++G +  A  LF K+   G  P+   +N LID  CK G + +A  L  +M E
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G +PT+F              +   ++   CT G + +A K+L Q+ E+   P+ +TY 
Sbjct: 859 EGIHPTVF--------------TYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYW 904

Query: 501 SLINGFCKVGNIN 513
           +LI G+ +  +++
Sbjct: 905 TLIQGYVRCESVD 917



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/529 (23%), Positives = 245/529 (46%), Gaps = 64/529 (12%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           ++ +++  L    + D A ++F +M+  GC     + N++LN   +   +   +A+    
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           ++ G +P   + + +     + K    A  +  +M +  +E ++V Y  ++ G  E G+ 
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTI 383
            DA ++L  +  RG  P+   Y  L+KG+C+   +++A  +  EI K   L  +   F  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IG 442
           +I G C+ G ++DA +L N+M  +    ++ ++N +I+G CK G + +A+ + ++M  +G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P              D  S  ++V+ YC  GL++KA++    +  +G     +TYN+L
Sbjct: 415 VRP--------------DTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNAL 460

Query: 503 INGFCKVGNINGALK-----------------------------------LFKELQLKGL 527
           + GFC +G+I+ AL+                                   L+KE   +GL
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
             ++ T+ T+INGL +++R  +A  +  +M Q  C P    Y++L +  C+      A S
Sbjct: 521 AKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA-S 579

Query: 588 LWLQYLRDISGRDDESMKSIEEF--LQKGEVENAIQGLL-EMDFKLNDFQLAPYTI---- 640
             L  L ++         +IE F  L  G       G + ++ F++++  L+P T+    
Sbjct: 580 RILNELENLG-----FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGA 634

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            + G C++G +  A N++  ++E   +     C  L+    ++G  D A
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 176/407 (43%), Gaps = 57/407 (14%)

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           VE++K  S  +  +F +L+  +   G +D A ++F++M   GC  S+   N++++ L + 
Sbjct: 163 VEVYKEFSF-SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQT 221

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC-TAGLIHKAYKILM 485
           G+L     +F +M             Q    + DK ++  M + YC   G++H A + + 
Sbjct: 222 GDLGATVAVFEQM-------------QRAGALPDKFTVAIMAKAYCKVKGVVH-ALEFVE 267

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY----------- 534
           ++ + G   +++ Y++++NG+C+VG  N A ++   L  +G  P+ VTY           
Sbjct: 268 EMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEK 327

Query: 535 -------------------------GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
                                    G +ING  ++ R EDA R+  +M  +    +  VY
Sbjct: 328 NMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVY 387

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE-SMKS-IEEFLQKGEVENAIQGLLEMD 627
             ++   C+  +   A ++ L  +  +  R D  S  S ++ + +KG +  A +    M 
Sbjct: 388 NIMINGYCKLGRMVEAHNI-LHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML 446

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                     Y   L G C  G + +AL ++ ++++        SC  L+ G  K G  +
Sbjct: 447 RNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTE 506

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            A++++  TL  G        N ++  L   K  +   A  L+ +MK
Sbjct: 507 KALNLWKETLARGLAKNTTTFNTVINGL--CKIERMPEAEELVDKMK 551


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 239/494 (48%), Gaps = 18/494 (3%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++ M   P    L+ Q    L S  ++       +LI+ Y        A    G + + 
Sbjct: 64  AIVRMGHYPTAISLFSQ----LHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKM 119

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             QP++  +N ++N      +   A+A   +++      +  ++  LINGL K+G+T  A
Sbjct: 120 GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDA 179

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +++L +M +  + PN  TY+ VI GLC+     +A RLF  +   G   D VAYN+L++G
Sbjct: 180 LQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHG 239

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C + +  EA  LL    +    P   +++ L+D L +  R  EA   +  M +   +PD
Sbjct: 240 CCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPD 299

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  ++ G   +  V +A +L + M +RG+ PD   YN LI G+C + ++D+A  L  
Sbjct: 300 IVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFK 359

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           EI  ++ +PN  T+  LI G+C+ G +   Q+L ++M   G  P +  +N  +D  CK+ 
Sbjct: 360 EIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK 419

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
             EKA  LF ++  G  P  ++                 +VE +C    +  A + L  L
Sbjct: 420 PYEKAISLFRQIVQGIWPDFYM--------------YDVIVENFCKGEKLKIAEEALQHL 465

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  P++ TY  +IN  CK  + + A+ L  ++      PD+VT+ T+I  LQ  +  
Sbjct: 466 LIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNET 525

Query: 548 EDAFRIFGQMPQNG 561
           + A ++  +M + G
Sbjct: 526 DKAEKLRLEMIERG 539



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 250/518 (48%), Gaps = 15/518 (2%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           K    +  L SF +M      P +++++ +L    R   +  A++++ ++      P+I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T ++LIN          A  +L  + + G  PN  T+  +I+G C      +A    L +
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G   D  +Y +L+NG CK  +  +AL LL+  E+D   P L +YS +IDGL + +  
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +A   +  +    I  DVV Y  +I G    G+ ++A +LL+ M    I PD Y +N L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +   C  G + +A+ +   + KR   P+  T+  L+ G C +  V +A++LFN+M K G 
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P V  +N LI+G CK   +++A +LF ++             +  N V + A+  ++++
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEI-------------RCKNLVPNLATYNSLID 378

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G +    +++ ++ + G  PDI+TYN  ++ FCK      A+ LF+++ ++G+ P
Sbjct: 379 GLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGIWP 437

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D   Y  ++    + ++ + A      +  +GC P+   Y  ++   C+   F  A +L 
Sbjct: 438 DFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLL 497

Query: 590 LQYLRDISGRDDESMKSIEEFLQ-KGEVENAIQGLLEM 626
            +   +    D  + ++I   LQ + E + A +  LEM
Sbjct: 498 SKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEM 535



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 236/496 (47%), Gaps = 16/496 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+    ++G    A+  F ++      P +     ++N    +     A ++   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K+   PN+VTF+ LING   +G    A+    ++  +G   ++F+Y  +I+GLC+  + 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A +L  KM++    P+ + Y+ +++G CK R + +AL L       G +  + +Y+ L
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G     ++ EA      M    I PD   + +++  L + G++ +A  + + M +RG 
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YNAL++GFC    + +AR L   + KR   P+   + +LI G C+  MVD+A  
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           LF ++      P++  +N+LIDGLCK G +     L  +M + G++P             
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSP------------- 403

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +    ++ +C +    KA  +  Q+ + G  PD   Y+ ++  FCK   +  A + 
Sbjct: 404 -DIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEA 461

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            + L + G  P+  TY  +IN L +    ++A  +  +M  N C P    +++++     
Sbjct: 462 LQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQE 521

Query: 579 RRKFSLAFSLWLQYLR 594
           R +   A  L L+ + 
Sbjct: 522 RNETDKAEKLRLEMIE 537



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 227/517 (43%), Gaps = 36/517 (6%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           + +  D+    F +M      P    ++ LL    ++     A++L       G  P + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + LI+          A++    + +   +P++V +  +I G    G V  AM    D+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G   D + Y +LI G C  G    A  L  ++ +    PN  T++ +I G+C++ ++
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NP------TL 447
            DA +LF+ +   G    V  +N+LI G C  G+  +A  L   M  G  NP       L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 448 FLRLSQGGNRVH---------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
              L + G  V                D  +   ++E +C +  + +A ++  ++ + G 
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD++ YN LING+CK+  ++ A+ LFKE++ K L P+  TY +LI+GL ++ R      
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +  +M   G +P    Y   +   C+ + +  A SL+ Q ++ I   D      I E   
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGI-WPDFYMYDVIVENFC 450

Query: 613 KGE----VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           KGE     E A+Q LL      N   +  YTI +  LC+D    EA+ + S + +     
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPN---VRTYTIMINALCKDCSFDEAMTLLSKMDDNDC-- 505

Query: 669 TPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            PP  V    +I  L +R   D A  + L  ++ G +
Sbjct: 506 -PPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 1/239 (0%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+    +  +A E F +M +   +PDV  YN ++N   +  +   A+ ++ E+   N
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKN 365

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +PN+ T++ LI+GL K G+     +++DEM  RG  P+  TY I +   C+    ++A 
Sbjct: 366 LVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAI 425

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF ++   G  PDF  Y+ ++  FCK  ++  A   L+     G  P + +Y+ +I+ L
Sbjct: 426 SLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINAL 484

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            +   +DEA     KM +    PD V +  +I  L E  +   A KL  +M ERG+V D
Sbjct: 485 CKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           V++  + K    + A E+   +    C P+V  Y  ++N   +   F  A+ +  +M   
Sbjct: 444 VIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDN 503

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           +C P+ VTF  +I  L +  +T+ A K+  EM +RG++ ++
Sbjct: 504 DCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 233/502 (46%), Gaps = 13/502 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  DE+++         F  L+  Y K    ++A+E   +M+   C P V  YN++++  
Sbjct: 264 QVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSY 323

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +  L   A+A+  EM      P++VT++ LI+GL ++GK + AI   DEM + G  PN 
Sbjct: 324 VKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNL 383

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I       +  E   +F + + +G  PD V +N LL  F +     E   + + 
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 443

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +K G++P   +Y  LI    R   +D A   Y++M E  I PDV  Y  ++  L+  G+
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 503

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            + A KL ++M ER   PD Y Y++L+  + +   LD+ ++L  +I+     P+      
Sbjct: 504 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+    +   + +A+K F ++ +  C   + + NA++    K   + K   +   M   K
Sbjct: 564 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM---K 620

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
              + L            A+  +++  Y   G   K   IL ++  SG  PD  +YN++I
Sbjct: 621 ESAINL----------SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
             + + G +  A +LF E++  GL+PD VTY   +         E+A  +   M   GC 
Sbjct: 671 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 730

Query: 564 PSPAVYKSLMTWSCRRRKFSLA 585
           P+   Y S++   CR  K + A
Sbjct: 731 PNERTYNSIVEGYCRNGKLTDA 752



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 261/593 (44%), Gaps = 23/593 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL-FLLALAVYYE 158
            +  L+S + + G    A+  F +M +   QP +  YN VL++  +  + +   + +   
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    P+  T++ LI+   +    + A ++ DEM   G  P+K T+  ++    +  R
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA  +  +M+  GC P  V YN+L++ + K   +++A+AL +  E  G  P + +Y+ 
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 353

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL RA + D A   Y +M     +P++  Y  +I+     GK  + M +  + R  G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 413

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            VPD   +N L+  F   GL  +   +  E+ K   +P   T+  LI    R G+ D A 
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNR 457
           +++ +M +AG +P V  +NA++  L + G  E+A  LF +ME     P            
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP------------ 521

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ S  +++  Y  A  + K   +   +      P      +L+    KV N+  A K
Sbjct: 522 --DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 579

Query: 518 LFKELQLKGLRPDSVTYGTLIN--GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            F EL+ K    D      +++  G  R+ R+ +  +I   M ++    S A Y SLM  
Sbjct: 580 AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE--KILSLMKESAINLSAATYNSLMHM 637

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDF 633
             R        ++ L  ++    R D    +  I  + +KG+++ A +   EM       
Sbjct: 638 YSRLGDCEKCENI-LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 696

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            +  Y I++     +   +EA+ +   +V         +   ++ G C+ G L
Sbjct: 697 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 196/400 (49%), Gaps = 18/400 (4%)

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  ++++G+   A  +LD        P+   YT ++S   +  R  +A  +F +M DSG 
Sbjct: 148 IRVMARAGRLAEASALLDAAPG----PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGV 203

Query: 235 SPDFVAYNALLNGFCKLRRV-DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            P  V YN +L+ + K+     E + L+ S ++ G  P   +Y+ LI    R   Y EA 
Sbjct: 204 QPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAA 263

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             + +M     EPD V +  ++    +A +  +A++++ +M   G  P    YN+LI  +
Sbjct: 264 QVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSY 323

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
              GLL+QA +L+ E+  +   P+  T+T LI G+ R G +D A   +++M + GC P++
Sbjct: 324 VKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNL 383

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +NALI      G+  +   +F +              +    V D  +  T++  +  
Sbjct: 384 CTYNALIKMHGVRGKFPEMMAVFDEF-------------RSAGFVPDIVTWNTLLAVFGQ 430

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            GL  +   +  ++ ++G +P+  TY SLI+ + + G  + A++++K +   G+ PD  T
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           Y  +++ L R  R E A ++F +M +  C P    Y SL+
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 24/387 (6%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+ EA ALL +       P  G+Y+ L+    RA R+ +A A +R+M +  ++P +V Y 
Sbjct: 156 RLAEASALLDAAPG----PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN 211

Query: 313 VMIRGLSE-AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           V++   S+ A   K+ ++L++ M+E G+ PD Y YN LI       L  +A  +  E+  
Sbjct: 212 VVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA 271

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  TF  L+    +    D+A ++  +ME+ GC PSV  +N+LI    K G LE+
Sbjct: 272 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 331

Query: 432 ANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  L  +ME+ G  P              D  +  T++     AG I  A     ++  +
Sbjct: 332 AVALKQEMEVKGMKP--------------DVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P++ TYN+LI      G     + +F E +  G  PD VT+ TL+    +   + + 
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +F +M + G  P    Y SL++   R   F LA  ++ + +      D  +  ++   
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497

Query: 611 LQKG----EVENAIQGLLEMDFKLNDF 633
           L +G    + E     + E D K +++
Sbjct: 498 LARGGRWEQAEKLFAEMEERDCKPDEY 524



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 176/410 (42%), Gaps = 78/410 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LISG  + G  + A+  + +M    C+P++  YNA++ +   +  F   +AV+ E 
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409

Query: 160 VKLNCLPNIVTFSLLI-----NGL------------------------------SKSGKT 184
                +P+IVT++ L+     NGL                              S+ G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++A+++   M + GI P+  TY  V+S L +  R ++A +LF +M++  C PD  +Y++L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL-------------------FR 285
           L+ +   +R+D+    +++   D +  R+  ++ L+  L                    R
Sbjct: 530 LHAYANAKRLDK----MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585

Query: 286 AKR-------YDEAYAWYRK-------------MFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            KR        +   + Y K             M E  I      Y  ++   S  G  +
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
               +L++++  G+ PD Y YN +I  +   G + +A  L  E+      P+  T+ I +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
                N M ++A +L   M   GC P+   +N++++G C+ G+L  A + 
Sbjct: 706 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIF 755



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 35/291 (12%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL  Q    +    +      +  ++S   + G  E+A + F +M+E DC+PD Y Y++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 139 VLNI---AFR-----------------------KQLFLL---------ALAVYYEMVKLN 163
           +L+    A R                       K L L+         A   + E+ +  
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  +I   + +++   K+       K+L  M +  I  +  TY  ++    ++   ++  
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  ++K SG  PD  +YN ++  + +  ++ EA  L    +  G  P + +Y+  +   
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 708

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
                ++EA    R M  +  +P+   Y  ++ G    GK+ DA   +S++
Sbjct: 709 VSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759


>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 821

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 307/714 (42%), Gaps = 73/714 (10%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLY 82
           P   F+S + V S   K   P++   FF  A     L  +  + +AV+S L +    D  
Sbjct: 19  PFDNFVS-SAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEV 77

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
              +  L           +   I GY+K G    AL    KM E     DV  Y+ +++ 
Sbjct: 78  RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDG 137

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R+     AL +  +M+K    PN++T++ +I GL K GK E A  + D +   GI  +
Sbjct: 138 LSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVD 197

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
           +F Y  +I G+C+    + A+ +   M+  G  P  + YN ++NG CK  RV EA  + +
Sbjct: 198 EFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDISK 257

Query: 263 SFEKDGFVPRLGSYSCL---------IDGLFRAKR------------------------- 288
                G V  + +YS L         ID +   +R                         
Sbjct: 258 -----GVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVG 312

Query: 289 -YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            Y EA A YR M E  + PD   Y  MI G  + G+++DA+++ +++R+   V    CYN
Sbjct: 313 AYGEADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKSS-VSAAVCYN 371

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            +I   C  G+L+ A  + +E+W++    + HT   L+  +  NG       L  K+E+ 
Sbjct: 372 HIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQL 431

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-----PTLFLRLSQGGNRVHD-- 460
                +GM N  I  LC  G  E A +  Y + + K+     P+  L+      R  D  
Sbjct: 432 NSDICLGMLNDAILLLCNRGSFEAA-IEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAY 490

Query: 461 -------KASLQTM--------VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                  + +L +M        +   C  G + KA  +       G   + ITYNSLING
Sbjct: 491 LLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLING 550

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            C+ G +  AL+LF  L   GL P  VTYG LI+ L +     DA ++   M   G  P+
Sbjct: 551 LCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 610

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLL 624
             +Y S++   C+  +   A  +  + +      D  ++ S I+ + +KG++E A++   
Sbjct: 611 ILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFA 670

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           E   +        +   +   C  G+++EA  +       + ++   S VKLI+
Sbjct: 671 EFKEENISADFLGFLFLIKCFCTKGRMEEARGLL------REMLVSESVVKLIN 718



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 258/570 (45%), Gaps = 63/570 (11%)

Query: 187 AIKMLDEMTQRGI-LP-NKFTYTIVISGLCQINRADEAYRLFLKMKDSGC-SPDFVAYNA 243
           AI++L+ MT + +  P + F  + VISG C+I + + A   F    DSG   P+ V Y A
Sbjct: 4   AIEVLEMMTNKKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTA 63

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +++  C+L +VDE   L+R  E +GF      YS  I G F+     +A    RKM E+ 
Sbjct: 64  VVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKG 123

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I  DVV Y ++I GLS  G ++ A+ LL  M + GI P+   Y A+I+G C  G L+ A 
Sbjct: 124 INRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAF 183

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L   I       +   +  LI G+C+ G ++ A  +   ME+ G  PS+  +N +I+GL
Sbjct: 184 VLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 243

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           CKAG + +A+                 +S+G   V D  +  T+++ Y     I    +I
Sbjct: 244 CKAGRVSEAD----------------DISKG--VVGDVITYSTLLDSYVKVENIDAVLEI 285

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             +  E+    D++  N L+  F  VG    A  L++ +   GL PD+ TY T+I G  +
Sbjct: 286 RRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYCK 345

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             + EDA  +F ++ ++  + +   Y  ++   C++     A  + ++        D  +
Sbjct: 346 TGQIEDALEMFNELRKSSVS-AAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHT 404

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKL----NDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
            +++   L         +G+L++ +K+    +D  L      ++ LC  G  + A+ ++ 
Sbjct: 405 SRTL---LHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGSFEAAIEVYM 461

Query: 660 VLVECKAIVTPPSCV----------------------------------KLIHGLCKRGY 685
           +++     VT PS +                                   +I+GLCK G+
Sbjct: 462 IMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGF 521

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           L  A+D+  +    G  L     N L+  L
Sbjct: 522 LVKALDLCNFAKSKGVTLNTITYNSLINGL 551



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 132/627 (21%), Positives = 267/627 (42%), Gaps = 78/627 (12%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L K    +  +   D + S  + V   ++  LI G  K G+  +A    G M++
Sbjct: 167 TAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQ 226

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QP +  YN V+N      L         + +    + +++T+S L++   K    + 
Sbjct: 227 RGIQPSILTYNTVIN-----GLCKAGRVSEADDISKGVVGDVITYSTLLDSYVKVENIDA 281

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            +++     +  I  +     I++     +    EA  L+  M + G +PD   Y  ++ 
Sbjct: 282 VLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIE 341

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CK  ++++AL +     K   V     Y+ +ID L +    + A     +++E+ +  
Sbjct: 342 GYCKTGQIEDALEMFNELRKSS-VSAAVCYNHIIDALCKKGMLETAMEVLIELWEKGLYL 400

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER------GIVPDTY-------CYNALIKGF 353
           D+     ++  +   G  K  + L+  + +       G++ D          + A I+ +
Sbjct: 401 DIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGSFEAAIEVY 460

Query: 354 C-----DLG----------LLDQARSLQVEIWKRDSLPNTHT------FTILICGMCRNG 392
                 DL           L+D  RSL   +   ++   T +      +TI+I G+C+ G
Sbjct: 461 MIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 520

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
            +  A  L N  +  G   +   +N+LI+GLC+ G L +A  LF  ++ IG  P+     
Sbjct: 521 FLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVPS----- 575

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                    + +   +++  C  GL   A K+L  +   G +P+I+ YNS+++G+CK+G 
Sbjct: 576 ---------EVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQ 626

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A+++     +  ++PD+ T  ++I G  +    E+A R+F +  +   +     +  
Sbjct: 627 TEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGFLF 686

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C +                  GR +E+   + E L     E+ ++ +  +D +L 
Sbjct: 687 LIKCFCTK------------------GRMEEARGLLREMLVS---ESVVKLINRVDAELV 725

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIF 658
           + +      +L+ LC+ G+V +A+ I 
Sbjct: 726 ESE--SIRGFLVELCEQGRVPQAIKIL 750



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 158/336 (47%), Gaps = 39/336 (11%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           +++ ++++INGL K G    A+ + +    +G+  N  TY  +I+GLCQ     EA RLF
Sbjct: 505 DVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLF 564

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             + + G  P  V Y  L++  CK     +A  LL S    G VP +  Y+ ++DG  + 
Sbjct: 565 DSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKL 624

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            + ++A     +    +++PD      +I+G  + G +++A+++ ++ +E  I  D   +
Sbjct: 625 GQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGF 684

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LIK FC  G +++AR L  E+   +S+                       KL N+++ 
Sbjct: 685 LFLIKCFCTKGRMEEARGLLREMLVSESVV----------------------KLINRVD- 721

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-----GKNPTLFLRLS--QGGNR-- 457
           A    S  +   L++ LC+ G + +A  +  ++       GKNP  + RL    G N   
Sbjct: 722 AELVESESIRGFLVE-LCEQGRVPQAIKILDEISSTIYLSGKNPGSYQRLQFLNGVNEKE 780

Query: 458 ------VHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
                 VHD  SL + +   CT+G + +A + +M +
Sbjct: 781 IKKEDYVHDFHSLHSTISSLCTSGKLEQANEFVMSV 816



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 194/429 (45%), Gaps = 47/429 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I GY K G  E ALE F ++++      V  YN +++   +K +   A+ V  E+ 
Sbjct: 336 YATMIEGYCKTGQIEDALEMFNELRKSSVSAAV-CYNHIIDALCKKGMLETAMEVLIELW 394

Query: 161 KLNCLPNIVTFSLLINGLSKSG---------------KTEVAIKMLDE----MTQRG--- 198
           +     +I T   L++ +  +G                +++ + ML++    +  RG   
Sbjct: 395 EKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGSFE 454

Query: 199 --------ILPNKFTYTI---VISGLCQINRADEAYRLFLKMKDSGCSP-DFVAYNALLN 246
                   ++    T T    ++  L    R+ +AY L +   ++  S  D + Y  ++N
Sbjct: 455 AAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 514

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   + +AL L    +  G      +Y+ LI+GL +     EA   +  +    + P
Sbjct: 515 GLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVP 574

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA-RSL 365
             V YG++I  L + G   DA KLL  M  +G+VP+   YN+++ G+C LG  + A R L
Sbjct: 575 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVL 634

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             ++  R   P+  T + +I G C+ G +++A ++F + ++         F  LI   C 
Sbjct: 635 SRKMMGRVK-PDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCT 693

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH----DKASLQTMVEQYCTAGLIHKAY 481
            G +E+A  L  +M + ++    +      NRV     +  S++  + + C  G + +A 
Sbjct: 694 KGRMEEARGLLREMLVSESVVKLI------NRVDAELVESESIRGFLVELCEQGRVPQAI 747

Query: 482 KILMQLAES 490
           KIL +++ +
Sbjct: 748 KILDEISST 756



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 146/327 (44%), Gaps = 30/327 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I+G  K G   KAL+     K      +   YN+++N   ++   + AL ++  + 
Sbjct: 509 YTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLD 568

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +  +P+ VT+ +LI+ L K G    A K+LD M  +G++PN   Y  ++ G C++ + +
Sbjct: 569 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTE 628

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A R+  +       PD    ++++ G+CK   ++EAL +   F+++        +  LI
Sbjct: 629 DAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGFLFLI 688

Query: 281 DGLFRAKRYDEAYAWYRKMFEE--------KIEPDVVLYGVMIRG----LSEAGKVKDAM 328
                  R +EA    R+M           +++ ++V     IRG    L E G+V  A+
Sbjct: 689 KCFCTKGRMEEARGLLREMLVSESVVKLINRVDAELV-ESESIRGFLVELCEQGRVPQAI 747

Query: 329 KLLSDMRE----RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
           K+L ++       G  P +Y     + G             + EI K D + + H+    
Sbjct: 748 KILDEISSTIYLSGKNPGSYQRLQFLNGVN-----------EKEIKKEDYVHDFHSLHST 796

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           I  +C +G ++ A +    M    C P
Sbjct: 797 ISSLCTSGKLEQANEFV--MSVLSCMP 821


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 172/668 (25%), Positives = 309/668 (46%), Gaps = 76/668 (11%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S VF +L+  + + G  + AL  F +M      P +   + +L    +K    +A+ V+ 
Sbjct: 156 SGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           ++V    +P++   S+++N   + G+ +VA+++L++M + G+ PN  TY  +++G     
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG-FVPRLGSY 276
             +   R+   M + G S + V    L+ G+CK  ++DEA  LLR  E+D   V     Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             L+DG  +  R ++A     +M    ++ ++V+   +I+G  + G+V +A ++   M +
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             + PD Y YN L+ G+C  G + +A  L  E+      P   T+  +I G+   G  DD
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 397 AQKLFNKMEKAG-------------CFPSVG----------------------MFNALID 421
           A  L++ M + G             CF  +G                       FN +I 
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLCK G+L +A  +F +M E+G +P              D+ + +T+ + YC  G + +A
Sbjct: 516 GLCKMGKLMEAGAVFDRMKELGLSP--------------DEITYRTLSDGYCKNGNVQEA 561

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           ++I   +        I  YNSLI+G  K+  +N    L  E+Q +GL P+ VTYGTLI+G
Sbjct: 562 FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISG 621

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL------- 593
                + + AF ++ +M + G TP+  V   +++   R  + S A  +  + L       
Sbjct: 622 WCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAV 681

Query: 594 ----RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
                D   ++D ++++  I + L K ++ N++   +             Y I + GLC+
Sbjct: 682 HNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI------------VYNIAIDGLCK 729

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            G++ EA ++ SVL+    +    +   LIH     G +D A  +    L+ G I    +
Sbjct: 730 SGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITI 789

Query: 708 CNYLLRSL 715
            N L+  L
Sbjct: 790 YNALINGL 797



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 187/707 (26%), Positives = 318/707 (44%), Gaps = 88/707 (12%)

Query: 61  RSFASNSAVISMLLKP------NGFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGD 113
           + F   S V  ML+K           LY    DE+ R G V  +    F L+    + G+
Sbjct: 150 KEFGFCSGVFDMLMKAFAERGMTKHALY--VFDEMSRIGRVPGLRSCSF-LLGKLVQKGE 206

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
              A+  F ++      PDVY+ + V+N   +     +A+ V  +MVK    PN+VT++ 
Sbjct: 207 GRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNG 266

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK-DS 232
           L+NG    G  E   ++L  M++RG+  N  T T+++ G C+  + DEA +L  +++ D 
Sbjct: 267 LVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDE 326

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
               D   Y  L++G+C++ R+++A+ +     + G    +   + LI G  +  +  EA
Sbjct: 327 LLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEA 386

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +  M +  ++PD   Y  ++ G    GKV  A  L  +M   GI P    YN +IKG
Sbjct: 387 ERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKG 446

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
             D+G  D A  L   + +R   PN  +   ++    + G  D A  L+ ++   G   S
Sbjct: 447 LVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKS 506

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              FN +I GLCK G+L +A  +F +M E+G +P              D+ + +T+ + Y
Sbjct: 507 TVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP--------------DEITYRTLSDGY 552

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A++I   +        I  YNSLI+G  K+  +N    L  E+Q +GL P+ 
Sbjct: 553 CKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV 612

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           VTYGTLI+G     + + AF ++ +M + G TP+  V   +++   R  + S A  +  +
Sbjct: 613 VTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDK 672

Query: 592 YL-----------RDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            L            D   ++D ++++  I + L K ++ N++   +             Y
Sbjct: 673 MLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI------------VY 720

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVE----------CKAI--------------------- 667
            I + GLC+ G++ EA ++ SVL+           C  I                     
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780

Query: 668 --VTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             + P   +   LI+GLCK G +D A  +F    + G +  P    Y
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLV--PNAVTY 825



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 249/510 (48%), Gaps = 48/510 (9%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           DE+    + V   +   LI GY K+G   +A   F  M +++ +PD Y YN +L+   R+
Sbjct: 356 DEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCRE 415

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  +  EM+     P +VT++ +I GL   G  + A+ +   M +RG+ PN+ + 
Sbjct: 416 GKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISC 475

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++    ++  +D A  L+ ++   G +   VA+N +++G CK+ ++ EA A+    ++
Sbjct: 476 CTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKE 535

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P   +Y  L DG  +     EA+     M  + +   + +Y  +I GL +  K+ D
Sbjct: 536 LGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLND 595

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
              LL +M+ RG+ P+   Y  LI G+CD   LD+A  L  E+ +R   PN    + ++ 
Sbjct: 596 VTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVS 655

Query: 387 GMCR--------------------------------NGMVDDAQKLFNKMEKAGCFPSVG 414
            + R                                N +  +AQK+ + ++K+    S+ 
Sbjct: 656 SLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLS 715

Query: 415 ---MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              ++N  IDGLCK+G+L++A              L + +S+G   + D  +  T++   
Sbjct: 716 NNIVYNIAIDGLCKSGKLDEA-----------RSVLSVLMSRG--FLPDNFTYCTLIHAC 762

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
             +G + +A+K+  ++ E G +P+I  YN+LING CK+GNI+ A +LF +L  KGL P++
Sbjct: 763 SVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNA 822

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           VTY  LI    R+   + A R+  +M + G
Sbjct: 823 VTYNILIGCYCRIGDLDKASRLREKMTEEG 852



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 155/656 (23%), Positives = 270/656 (41%), Gaps = 98/656 (14%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +V DV+   ++++ + +VG  + A+E   KM +   +P+V  YN ++N    +  F    
Sbjct: 222 IVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVE 281

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML---------------------- 191
            V   M +     N+VT ++L+ G  K GK + A K+L                      
Sbjct: 282 RVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDG 341

Query: 192 --------------DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
                         DEM + G+  N      +I G C++ +  EA R+F+ M D    PD
Sbjct: 342 YCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPD 401

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
             +YN LL+G+C+  +V +A  L      DG  P + +Y+ +I GL     YD+A   + 
Sbjct: 402 CYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWH 461

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M E  + P+ +    M+    + G    AM L  ++  RG    T  +N +I G C +G
Sbjct: 462 LMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMG 521

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            L +A ++   + +    P+  T+  L  G C+NG V +A ++   ME+     S+ M+N
Sbjct: 522 KLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYN 581

Query: 418 ALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           +LIDGL K  +L     L  +M+  G +P +               +  T++  +C    
Sbjct: 582 SLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV--------------VTYGTLISGWCDEQK 627

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL------FKELQLKGLRPD 530
           + KA+ +  ++ E G  P+++  + +++   +   I+ A  +      F  L +     D
Sbjct: 628 LDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSD 687

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW- 589
            +    L    Q++    D   I   +  N       VY   +   C+  K   A S+  
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNN------IVYNIAIDGLCKSGKLDEARSVLS 741

Query: 590 ----------------LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
                           L +   +SG  DE+ K  +E L+KG + N               
Sbjct: 742 VLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPN--------------- 786

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            +  Y   + GLC+ G +  A  +F  L +   +    +   LI   C+ G LD A
Sbjct: 787 -ITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKA 841



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 10/235 (4%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            F LY++ ++   + NV V S +    +S  Y+     +A     KM +FD    + ++N
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKI----VSSLYRDDRISEATVILDKMLDFDI---LAVHN 683

Query: 138 AVLNIAFRKQLFLLALAVYYEMVK---LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
              +   +  L L A  +   + K    N L N + +++ I+GL KSGK + A  +L  +
Sbjct: 684 KCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVL 743

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             RG LP+ FTY  +I         DEA++L  +M + G  P+   YNAL+NG CKL  +
Sbjct: 744 MSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNI 803

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           D A  L     + G VP   +Y+ LI    R    D+A     KM EE I   ++
Sbjct: 804 DRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 35/281 (12%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           +S   +++  LI G +K+       +   +M+     P+V  Y  +++    +Q    A 
Sbjct: 573 MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAF 632

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP------------ 201
            +Y+EM++    PN+V  S +++ L +  +   A  +LD+M    IL             
Sbjct: 633 HLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKN 692

Query: 202 -----------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
                                  N   Y I I GLC+  + DEA  +   +   G  PD 
Sbjct: 693 DLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDN 752

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
             Y  L++       VDEA  L     + G +P +  Y+ LI+GL +    D A   + K
Sbjct: 753 FTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYK 812

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++++ + P+ V Y ++I      G +  A +L   M E GI
Sbjct: 813 LYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 238/506 (47%), Gaps = 24/506 (4%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS----AVISMLLKPNGFDLYWQ 84
           L+   V  V+    + Q   RFF WA K++    +  N+     +I +L +   F     
Sbjct: 181 LNPDAVVKVLNLQTDAQNALRFFQWADKQE---GYDHNTDAYFTMIDILGRAKMFTELQS 237

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV--YIYNAVLNI 142
            L ++++    +   +    +  Y + G  +++LE+F  MKE   +P +    YN+VL  
Sbjct: 238 LLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVS 297

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             + +   +A  ++ +M+      N +T++ +I       K E A+K+LD+M Q    P+
Sbjct: 298 LVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPD 357

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYTIVIS LC+    ++AY +  KM+++GC P+   YNAL+ G C +RR +EAL L+ 
Sbjct: 358 VVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVT 417

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             E+ G  P + +Y+ L  GL + +R D A   + +     ++P+ V Y  ++ G     
Sbjct: 418 LMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGS 477

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           ++ +AM +L +M +    PD   Y  LI+G      L  A  +  E+  +    N  T  
Sbjct: 478 RLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLN 537

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EI 441
           IL  G+ R G   DA   + +M+  G   S   +   I  L  AGE+E+A  L Y+M   
Sbjct: 538 ILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINK 597

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G +P L               +  TM++ +C  G +  A  +L  + E+G  PD  +YN 
Sbjct: 598 GYSPNL--------------TTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNI 643

Query: 502 LINGFCKVGNINGALKLFKELQLKGL 527
           LI  F   G    A +L+     +G+
Sbjct: 644 LIKEFHNQGRTQDADQLYATALERGV 669



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 186/407 (45%), Gaps = 16/407 (3%)

Query: 218 RADEAYRLFLKMKDSGCSPDFV--AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           R  E+   F  MK+ G  P  +  AYN++L    K +++D A  L      +G      +
Sbjct: 266 RFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLT 325

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ +I   F  ++ ++A      M +    PDVV Y ++I  L +   ++ A  +L  MR
Sbjct: 326 YTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMR 385

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           E G  P+ Y YNALI+G C +   ++A  L   + +    PN +T+TIL  G+C+   +D
Sbjct: 386 ENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLD 445

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A+++FN+    G  P+   +N L++G C+   L +A      M+I       L+     
Sbjct: 446 RAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEA------MDI-------LKEMHQN 492

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           +   D  +  T+++       +  A ++  ++   G   +  T N L  G  +VGN   A
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDA 552

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
              ++ ++ +G    +  Y   I+ L      E+A  +  +M   G +P+   Y +++  
Sbjct: 553 SIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKG 612

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQ 621
            CR+ +   A ++    + +  G D  S    I+EF  +G  ++A Q
Sbjct: 613 FCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQ 659



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 210/493 (42%), Gaps = 19/493 (3%)

Query: 219 ADEAYRLFL-KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           A  A R F    K  G   +  AY  +++   + +   E  +LL+  +  G         
Sbjct: 196 AQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLH 255

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV--LYGVMIRGLSEAGKVKDAMKLLSDMR 335
             +    R+ R+ E+   +  M E   EP ++   Y  ++  L +  K+  A  L + M 
Sbjct: 256 SFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMI 315

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G+  +   Y ++I+ F     ++ A  L  ++ + +  P+  T+TI+I  +C+  M++
Sbjct: 316 NNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIE 375

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
            A  +  KM + GC P++  +NALI GLC     E+A  L   ME G  P          
Sbjct: 376 QAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPP--------- 426

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               +  +   +    C    + +A ++  +    G  P+ +TYN+L+NG+C+   +  A
Sbjct: 427 ----NIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEA 482

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           + + KE+      PD VTY TLI GL + ++  DA R+  +M   G   +      L   
Sbjct: 483 MDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARG 542

Query: 576 SCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             R      A S++ + ++D   +    +   +I      GE+E A   L EM  K    
Sbjct: 543 LARVGNHKDA-SIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L  Y   + G C+ G++ +A  + + ++E        S   LI     +G    A  ++
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLY 661

Query: 694 LYTLKNGFILRPR 706
              L+ G +L P+
Sbjct: 662 ATALERGVVLNPK 674


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 227/458 (49%), Gaps = 19/458 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY K G  E+A  +  +++  +C+ D+  +NA+ N  F K+     + +Y  ++   
Sbjct: 13  LIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFN-GFCKRKMKEEVFIYMGLMWKC 71

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           CLPN++T+   I+ L K G  +   K   EM + GI+PN   +T +I G  +I   D AY
Sbjct: 72  CLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAY 131

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L+  M  S   P+   Y AL+NGFCK   ++ A        + G +P    Y+ +IDG 
Sbjct: 132 QLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGH 191

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F+    D A  ++ +M +E    D+V YGV+I GL   G++   ++++ DM   G+ PD 
Sbjct: 192 FKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDK 251

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                L+      G    A  +  E+  R   P+  T + LI G+C++G   DA+  F K
Sbjct: 252 VVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCK 311

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
            EKA        + ALIDG+CK G L++               + + +S+ G  V DK  
Sbjct: 312 -EKANEVS----YTALIDGICKEGNLDEVE------------RVVMEMSESG-FVPDKFV 353

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             + + + C  G I +A+K+  ++ E G   D++TY+SLI G    G +  A +LF ++ 
Sbjct: 354 YTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDML 413

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            +G+ PDS+ +  LI G  + D       +  +M + G
Sbjct: 414 KRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRG 451



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 231/490 (47%), Gaps = 60/490 (12%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G LP+  TY  +I G C+  + +EA     +++++ C  D V++NAL NGFCK R++ E 
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCK-RKMKEE 60

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + +         +P + +Y   ID L +    D  Y ++++M ++ I P+++ +  +I G
Sbjct: 61  VFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
            S+ G +  A +L  DM +   +P+ Y Y ALI GFC  G+L++A    +++ +   +PN
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
           +  +T +I G  + G +D A K F++M K      +  +  +I GL   G L+K      
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKV----- 235

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
            +E+ ++      + + G    DK  L T++  +  AG    AY +  +L   G  PD +
Sbjct: 236 -LEVMED------MVRNG-LAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAV 287

Query: 498 TYNSLINGFCKVGNINGALKLF-KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           T +SLI+G CK G  + A   F KE      + + V+Y  LI+G+ +    ++  R+  +
Sbjct: 288 TISSLIDGLCKDGRYHDAKGYFCKE------KANEVSYTALIDGICKEGNLDEVERVVME 341

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEV 616
           M ++G  P   VY S +   CR+ K   AF +                K +EE +     
Sbjct: 342 MSESGFVPDKFVYTSWIAELCRQGKIVEAFKV--------------KNKMVEEGI----- 382

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
                          D  L  Y+  + GL   G + EA  +F  ++  K  + P S   +
Sbjct: 383 ---------------DLDLLTYSSLIFGLANKGLMIEAKQLFDDML--KRGIIPDS---M 422

Query: 677 IHGLCKRGYL 686
           +  +  RGYL
Sbjct: 423 VFDILIRGYL 432



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 252/565 (44%), Gaps = 46/565 (8%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG-KTEVAIK 189
           PD+  YN++++   +      A      +    C  ++V+F+ L NG  K   K EV I 
Sbjct: 5   PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEVFIY 64

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           M   +  +  LPN  TY   I  LC++   D  Y+ F +M+  G  P+ +A+  L++G+ 
Sbjct: 65  M--GLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYS 122

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K+  +D A  L +   K   +P + +Y+ LI+G  +    + A  ++ KM E  I P+  
Sbjct: 123 KIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNST 182

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +Y  +I G  + G +  AMK  S+MR+     D   Y  +I G  + G LD+   +  ++
Sbjct: 183 VYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDM 242

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            +    P+    T L+    + G    A  ++ ++   G  P     ++LIDGLCK G  
Sbjct: 243 VRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRY 302

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             A   F K              +  N V    S   +++  C  G + +  +++M+++E
Sbjct: 303 HDAKGYFCK--------------EKANEV----SYTALIDGICKEGNLDEVERVVMEMSE 344

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           SG +PD   Y S I   C+ G I  A K+  ++  +G+  D +TY +LI GL       +
Sbjct: 345 SGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIE 404

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR----------DISGR 599
           A ++F  M + G  P   V+  L+    ++    +A S   + +R           IS R
Sbjct: 405 AKQLFDDMLKRGIIPDSMVFDILIRGYLKQDN-PVAISHLHEEMRRRGLLTIDKITISFR 463

Query: 600 D--DESMKSIEEFLQKGEVENAI---QGLLEMDFKL--NDFQLAPY--TIWLIGLCQDGQ 650
           +  +E +   E ++Q+    N I   Q  +E DF +  + F++  Y   ++ +      Q
Sbjct: 464 NQTEEFVSKQESYVQRPCPSNYIKRKQKYMEFDFHIFRDKFRIPGYRRHVYCLLFSCYCQ 523

Query: 651 VKEALNIFSVLVECKAIVTPPSCVK 675
             E L      V  KAI TP   +K
Sbjct: 524 APECL-----FVALKAIYTPLLAIK 543



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 200/467 (42%), Gaps = 55/467 (11%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD+V Y  +I G  + G+V++A   +  +R      D   +NAL  GFC   + ++    
Sbjct: 5   PDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEVFIY 64

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +WK   LPN  T+   I  +C+ G +D   K F +M K G  P++  F  LIDG  K
Sbjct: 65  MGLMWKC-CLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSK 123

Query: 426 AGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G L+ A  L+  M    + P ++              +   ++  +C  G++ +A    
Sbjct: 124 IGNLDFAYQLYKDMCKSMHLPNVY--------------TYAALINGFCKRGMLERAEWFF 169

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           +++ E G +P+   Y S+I+G  K GNI+ A+K F E++ +  R D V YG +I+GL   
Sbjct: 170 LKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNN 229

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            R +    +   M +NG  P   V  +LM    +      A+ ++ + L      D  ++
Sbjct: 230 GRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTI 289

Query: 605 KSIEEFLQK----------------------------------GEVENAIQGLLEMDFKL 630
            S+ + L K                                   EVE  +  + E  F  
Sbjct: 290 SSLIDGLCKDGRYHDAKGYFCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVP 349

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           + F    YT W+  LC+ G++ EA  + + +VE    +   +   LI GL  +G +  A 
Sbjct: 350 DKF---VYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAK 406

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            +F   LK G I    V + L+R  L  K +  V   HL   M+  G
Sbjct: 407 QLFDDMLKRGIIPDSMVFDILIRGYL--KQDNPVAISHLHEEMRRRG 451



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 173/356 (48%), Gaps = 5/356 (1%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           I  L K    D  ++   E+R   +      F  LI GY K+G+ + A + +  M +   
Sbjct: 83  IDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMH 142

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            P+VY Y A++N   ++ +   A   + +M+++  +PN   ++ +I+G  K G  +VA+K
Sbjct: 143 LPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMK 202

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
              EM +     +   Y +VISGL    R D+   +   M  +G +PD V    L++   
Sbjct: 203 YFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHF 262

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K      A  + R     GF P   + S LIDGL +  RY +A  ++ K   EK   + V
Sbjct: 263 KAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCK---EK--ANEV 317

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I G+ + G + +  +++ +M E G VPD + Y + I   C  G + +A  ++ ++
Sbjct: 318 SYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKM 377

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
            +     +  T++ LI G+   G++ +A++LF+ M K G  P   +F+ LI G  K
Sbjct: 378 VEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLK 433



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 5/274 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I    K    D+  +   E+R  +  +    + V+ISG    G  +K LE    M  
Sbjct: 185 TSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVR 244

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD  +   +++  F+      A  VY E++     P+ VT S LI+GL K G+   
Sbjct: 245 NGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHD 304

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A     +        N+ +YT +I G+C+    DE  R+ ++M +SG  PD   Y + + 
Sbjct: 305 AKGYFCKEK-----ANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIA 359

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             C+  ++ EA  +     ++G    L +YS LI GL       EA   +  M +  I P
Sbjct: 360 ELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIP 419

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           D +++ ++IRG  +         L  +MR RG++
Sbjct: 420 DSMVFDILIRGYLKQDNPVAISHLHEEMRRRGLL 453



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 2/214 (0%)

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G+LPDI+TYNSLI+G+CK G +  A    K ++    R D V++  L NG  +   +E+ 
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEE 609
           F   G M +  C P+   Y + +   C+       +  + +  +D I          I+ 
Sbjct: 62  FIYMGLMWK-CCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           + + G ++ A Q   +M   ++   +  Y   + G C+ G ++ A   F  ++E   +  
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
                 +I G  K+G +D+AM  F    K  F L
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRL 214


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 278/588 (47%), Gaps = 18/588 (3%)

Query: 162 LNCLP--NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           L+ +P  N+V  + ++ G  + G+ + A ++++ M   G+ PN  T+   IS LC+  R 
Sbjct: 204 LDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRV 263

Query: 220 DEAYRLFLKMKDSG----CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
            +AYR+F  M++        PD V ++ +L+GFC+   VDEA  L+      GF+ R+ S
Sbjct: 264 LDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVES 323

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+  + GL R     EA    R+M  E ++P+   Y +++ GL + GK  D  K+   ++
Sbjct: 324 YNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVK 383

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
              + PD   Y +L+  +C  G    A  +  E+ ++   PN+ T+ +L+  + + G + 
Sbjct: 384 SGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRIT 443

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---------EIGKNPT 446
           +A++L  +M + G        N +IDGLC+  +L+ A  +   M          +G +  
Sbjct: 444 EAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFL 503

Query: 447 LFLRLSQGGNR-VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             L  S    R + D+ +  T+V   C  G   +A K L+++      PD + Y++ I+G
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +CK G  + A+K+ ++++ KG +P + TY  LI G +     ++  ++  +M   G  P+
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
              Y SL+   C R   + A  L  + L++    +  S + + +   K    +A Q + +
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
                   +   Y++    L   G+  EA+NI   ++E +  +      ++I GLCK   
Sbjct: 684 ASLSTCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDE 743

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
           +D    +    +  G+   P     ++ +L  S+  KK H   L  +M
Sbjct: 744 VDHGHRLLKLLMVKGYSFDPAAFMPVIDAL--SERGKKQHVDMLSQKM 789



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 214/495 (43%), Gaps = 48/495 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F V++SG+ + G  ++A      M+       V  YN  L+   R  +   A  +  EM
Sbjct: 288 TFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREM 347

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINR 218
                 PN  T++++++GL K GK    ++ +++  + G++ P+  TYT ++   C    
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKA-FDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGN 406

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A  A R+  +M   GC+P+   YN LL    K  R+ EA  LL    + G+     S + 
Sbjct: 407 AAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNI 466

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEE-----------------------KIEPDVVLYGVMI 315
           +IDGL R  + D A      M+ E                       +  PD + Y  ++
Sbjct: 467 IIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLV 526

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             L + G+  +A K L +M  + I PD+  Y+  I G+C  G    A  +  ++ K+   
Sbjct: 527 SALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCK 586

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+T T+ +LI G       D+  KL ++M+  G  P+V  +N+LI   C+ G + KA  L
Sbjct: 587 PSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPL 646

Query: 436 FYKM---EIGKNPTLFLRLSQ---------GGNRVHDKASLQT----------MVEQYCT 473
             +M   EI  N T F  L +            RV D ASL T          M  Q  T
Sbjct: 647 LDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD-ASLSTCGQKEVLYSLMCTQLST 705

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G   +A  IL  + E         Y  +I G CKV  ++   +L K L +KG   D   
Sbjct: 706 YGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAA 765

Query: 534 YGTLINGLQRVDREE 548
           +  +I+ L    +++
Sbjct: 766 FMPVIDALSERGKKQ 780



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 1/270 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++S L K   FD   + L E+   ++S  S ++   I GY K G    A++    M++
Sbjct: 523 STLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEK 582

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C+P    YN ++     K      L +  EM      PN++T++ LI    + G    
Sbjct: 583 KGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNK 642

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +LDEM Q  I+PN  ++ ++I   C+ +    A R+F     S C    V Y+ +  
Sbjct: 643 AMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF-DASLSTCGQKEVLYSLMCT 701

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
                 R  EA+ +L +  +         Y  +I+GL +    D  +   + +  +    
Sbjct: 702 QLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSF 761

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           D   +  +I  LSE GK +    L   M E
Sbjct: 762 DPAAFMPVIDALSERGKKQHVDMLSQKMME 791


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 228/429 (53%), Gaps = 20/429 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKE 126
           +++ ++  + F+ +W   +E +S    VV DV  F +LI G  + G+ EK+ +   ++ E
Sbjct: 135 LLTFVVGSSSFNQWWSFFNENKS---KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE 191

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F   P+V IY  +++   +K     A  +++EM KL  + N  T+++LINGL K+G  + 
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +M ++M + G+ PN +TY  V++ LC+  R  +A+++F +M++ G S + V YN L+ 
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  +++EA  ++   + DG  P L +Y+ LIDG     +  +A +  R +    + P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V Y +++ G    G    A K++ +M ERGI P    Y  LI  F     +++A  L+
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           + + +   +P+ HT+++LI G C  G +++A +LF  M +  C P+  ++N +I G CK 
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491

Query: 427 GELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G   +A  L  +ME  +  P +              AS + M+E  C      +A +++ 
Sbjct: 492 GSSYRALKLLKEMEEKELAPNV--------------ASYRYMIEVLCKERKSKEAERLVE 537

Query: 486 QLAESGNLP 494
           ++ +SG  P
Sbjct: 538 KMIDSGIDP 546



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 232/470 (49%), Gaps = 16/470 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++ V+I+ Y +      ++  F +M +    P    +N +L        F    + + E 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   + ++ +F +LI G  ++G+ E +  +L E+T+ G  PN   YT +I G C+    
Sbjct: 156 -KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  LF +M   G   +   Y  L+NG  K     +   +    ++DG  P L +Y+C+
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++ L +  R  +A+  + +M E  +  ++V Y  +I GL    K+ +A K++  M+  GI
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   YN LI GFC +G L +A SL  ++  R   P+  T+ IL+ G CR G    A K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRV 458
           +  +ME+ G  PS   +  LID   ++  +EKA  L   ME +G  P             
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP------------- 441

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   ++  +C  G +++A ++   + E    P+ + YN++I G+CK G+   ALKL
Sbjct: 442 -DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            KE++ K L P+  +Y  +I  L +  + ++A R+  +M  +G  PS ++
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 222/449 (49%), Gaps = 19/449 (4%)

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           F  Y  ++N + + + ++ +++       +GFVP    ++ L+  +  +  +++ ++++ 
Sbjct: 94  FRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFN 153

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + K+  DV  +G++I+G  EAG+++ +  LL ++ E G  P+   Y  LI G C  G
Sbjct: 154 EN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A+ L  E+ K   + N  T+T+LI G+ +NG+     +++ KM++ G FP++  +N
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            +++ LCK G  + A  +F +M E G +  +               +  T++   C    
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNI--------------VTYNTLIGGLCREMK 318

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +++A K++ Q+   G  P++ITYN+LI+GFC VG +  AL L ++L+ +GL P  VTY  
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L++G  R      A ++  +M + G  PS   Y  L+    R      A  L L  + ++
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS-MEEL 437

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               D    S  I  F  KG++  A +    M  K  +     Y   ++G C++G    A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           L +   + E +      S   +I  LCK 
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKE 526



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 2/330 (0%)

Query: 92  GNVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           G + +V++   + VLI+G +K G  ++  E + KM+E    P++Y YN V+N   +    
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  V+ EM +     NIVT++ LI GL +  K   A K++D+M   GI PN  TY  +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G C + +  +A  L   +K  G SP  V YN L++GFC+      A  +++  E+ G 
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +Y+ LID   R+   ++A      M E  + PDV  Y V+I G    G++ +A +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L   M E+   P+   YN +I G+C  G   +A  L  E+ +++  PN  ++  +I  +C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           +     +A++L  KM  +G  PS  + + +
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 188/389 (48%), Gaps = 23/389 (5%)

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           LY V+I    ++  +  ++   ++M + G VP + C+N L+         +Q  S   E 
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE- 154

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            K   + + ++F ILI G C  G ++ +  L  ++ + G  P+V ++  LIDG CK GE+
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           EKA  LF++M  GK     L L      V ++ +   ++      G+  + +++  ++ E
Sbjct: 215 EKAKDLFFEM--GK-----LGL------VANERTYTVLINGLFKNGVKKQGFEMYEKMQE 261

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P++ TYN ++N  CK G    A ++F E++ +G+  + VTY TLI GL R  +  +
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-DESMKS-- 606
           A ++  QM  +G  P+   Y +L+   C   K   A SL     RD+  R    S+ +  
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC----RDLKSRGLSPSLVTYN 377

Query: 607 --IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             +  F +KG+   A + + EM+ +        YTI +    +   +++A+ +   + E 
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
             +    +   LIHG C +G ++ A  +F
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLF 466



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 152/312 (48%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T + + + K    + GF  +    +     +  + + V++ L K       +Q  DE+R 
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             VS     +  LI G  +     +A +   +MK     P++  YN +++          
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL++  ++      P++VT+++L++G  + G T  A KM+ EM +RGI P+K TYTI+I 
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              + +  ++A +L L M++ G  PD   Y+ L++GFC   +++EA  L +S  +    P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               Y+ +I G  +      A    ++M E+++ P+V  Y  MI  L +  K K+A +L+
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536

Query: 332 SDMRERGIVPDT 343
             M + GI P T
Sbjct: 537 EKMIDSGIDPST 548



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 122/238 (51%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + +D+++S  ++     +  LI G+  VG   KAL     +K     P +  YN +++  
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            RK     A  +  EM +    P+ VT+++LI+  ++S   E AI++   M + G++P+ 
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY+++I G C   + +EA RLF  M +  C P+ V YN ++ G+CK      AL LL+ 
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            E+    P + SY  +I+ L + ++  EA     KM +  I+P   +  ++ R  +++
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDS 561



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 79/207 (38%), Gaps = 43/207 (20%)

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y  +IN   +      +   F +M  NG  P    +  L+T+       S +F+ W  + 
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG----SSSFNQWWSFF 152

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                                  EN  + +L+         +  + I + G C+ G++++
Sbjct: 153 N----------------------ENKSKVVLD---------VYSFGILIKGCCEAGEIEK 181

Query: 654 ALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +   F +L+E       P+ V    LI G CK+G ++ A D+F    K G +   R    
Sbjct: 182 S---FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           L+  L   K+  K   + +  +M+  G
Sbjct: 239 LINGLF--KNGVKKQGFEMYEKMQEDG 263


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 246/529 (46%), Gaps = 50/529 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI    K+GD   A  +  +M+E DC P+V  Y++++N   ++ L   A  V  +M
Sbjct: 117 TYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 176

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V  N +PNI T+++L++G  K+G  ++A+ +  +M Q G+  N F     ++ + +  R 
Sbjct: 177 VHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 236

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  KM   G  PD V Y  L++GF K  +V  AL L +       V  + +++ L
Sbjct: 237 EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVL 296

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ LF+  + D   + Y  M E  + PD+  Y  M+ G  + G    A++L ++M+ R +
Sbjct: 297 INCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL 355

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEI----------------------WKRDSLPN 377
           +P+    N +I G C+ G ++ A  +  E+                       + D++  
Sbjct: 356 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQ 415

Query: 378 TH-------------TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           TH              + ILI  +C+ GM   A  +   ME+ G       +NALI G C
Sbjct: 416 THELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYC 475

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            +  L++A + +  M       L  R+S       D  +   ++     AGLIH+A  +L
Sbjct: 476 ISSHLKRAFMTYSTM-------LSERVSP------DIETYNLLLGGLSKAGLIHEADDLL 522

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++ + G +P+  TY +L+ G CKV N    L+++ E+ +KG  P    Y  LI    ++
Sbjct: 523 SEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKM 582

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF-SLAFSLWLQY 592
            + + A  +  +M   G +P+   Y  L+   C   K   L  +L + Y
Sbjct: 583 GKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISY 631



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 260/560 (46%), Gaps = 17/560 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +R  N  V++    VLI G +K G  ++A   F  + + +  P+   Y+A+++   +   
Sbjct: 73  VRGNNFDVIACT--VLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGD 130

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A +  +EM + +C+PN++T+S LING  K G    A K+L +M  +  +PN  TY I
Sbjct: 131 INGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAI 190

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++ G  +    D A  L+ KMK  G   +    +A +N   +  R++EA  L+      G
Sbjct: 191 LLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGG 250

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P L +Y+ L+DG  ++ +   A    ++M  + +  D+V + V+I  L + GK  D  
Sbjct: 251 LKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTE 309

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            + S MRE G+ PD   YN ++ G    G    A  L  E+  R  +PN  T  I+I G+
Sbjct: 310 SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGL 369

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +++A  +  +M   G +P+   +  L++   K+    +A+ +    E+  N  L 
Sbjct: 370 CEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKS---RRADTILQTHELLVNMQLK 426

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +          DK     ++   C  G+  KA  +L  + E G + D  TYN+LI+G+C 
Sbjct: 427 V----------DKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCI 476

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             ++  A   +  +  + + PD  TY  L+ GL +     +A  +  ++ + G  P+   
Sbjct: 477 SSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACT 536

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
           Y++LM   C+ R       ++ +  ++    +       I  F + G+++ A + + EM 
Sbjct: 537 YETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQ 596

Query: 628 FKLNDFQLAPYTIWLIGLCQ 647
            K        Y I + G C 
Sbjct: 597 TKGVSPTCTTYDILICGWCN 616



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 178/340 (52%), Gaps = 7/340 (2%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+ S NV      F VLI+  +K+G  +     +  M+E    PD+  YN +LN  F+K 
Sbjct: 280 EMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKG 338

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
            +  AL ++ EM     +PN +T +++INGL ++G+ E AI +L EM   G+ P   TY 
Sbjct: 339 NWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYR 398

Query: 208 IVISGLCQINRAD---EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           I+++   +  RAD   + + L + M+      D   YN L++  CKL    +A A+L+  
Sbjct: 399 ILLNISSKSRRADTILQTHELLVNMQ---LKVDKDVYNILISNLCKLGMTRKATAVLKDM 455

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           E+ G +    +Y+ LI G   +     A+  Y  M  E++ PD+  Y +++ GLS+AG +
Sbjct: 456 EERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLI 515

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A  LLS++++RG+VP+   Y  L+ G C +    +   +  E+  +  +P    + +L
Sbjct: 516 HEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNML 575

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           I    + G +  A++L N+M+  G  P+   ++ LI G C
Sbjct: 576 IGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 615



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 242/554 (43%), Gaps = 19/554 (3%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV     P++VTF  ++ GL K GK      +L EM + G+  N  +YTI++  L +  +
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA      M   G + D +A   L++G  K  ++ EA  L  +  +   VP   +YS 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LID   +    + A +   +M E+   P+V+ Y  +I G  + G + DA K+L  M  + 
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            +P+   Y  L+ G    G  D A  L  ++ +     N       +  M R+G +++A+
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +L  KM   G  P +  +  L+DG  K+G++  A  L  +M                N V
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM-------------TSKNVV 287

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   ++      G       I   + E G  PD+ TYN+++NG  K GN   AL+L
Sbjct: 288 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 346

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           + E++ + L P+++T   +INGL    R E+A  I  +M   G  P+   Y+ L+  S +
Sbjct: 347 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 406

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
            R+         + L ++  + D+ + +  I    + G    A   L +M+ +       
Sbjct: 407 SRRADTILQTH-ELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTT 465

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y   + G C    +K A   +S ++  +      +   L+ GL K G +  A D+    
Sbjct: 466 TYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEI 525

Query: 697 LKNGFILRPRVCNY 710
            K G +  P  C Y
Sbjct: 526 KKRGLV--PNACTY 537



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 276/627 (44%), Gaps = 36/627 (5%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDV  + ++L    +         +  EM K+    N V++++L++ L K+GK   A+  
Sbjct: 8   PDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMT 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L  M  RG   +    T++I GL +  +  EA  LF  +      P+++ Y+AL++  CK
Sbjct: 68  LACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCK 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           L  ++ A + L   E+   VP + +YS LI+G  +     +A+   RKM  +   P++  
Sbjct: 128 LGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICT 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y +++ G  +AG    A+ L S M++ G+  + +  +A +      G +++A  L  ++ 
Sbjct: 188 YAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMA 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                P+   +T L+ G  ++G V  A  L  +M        +  FN LI+ L K G+ +
Sbjct: 248 SGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSD 307

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
             ++     E+G +P              D A+  TM+      G    A ++  ++   
Sbjct: 308 TESIYSAMREMGLSP--------------DLATYNTMLNGNFKKGNWTSALELWNEMKSR 353

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
             +P+ IT N +ING C+ G +  A+ + KE+ L GL P S TY  L+N   +  R +  
Sbjct: 354 KLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTI 413

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR----DDESMKS 606
            +    +          VY  L++  C+      A ++    L+D+  R    D  +  +
Sbjct: 414 LQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAV----LKDMEERGIIADTTTYNA 469

Query: 607 -IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
            I  +     ++ A      M  +     +  Y + L GL + G + EA ++ S +   K
Sbjct: 470 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIK--K 527

Query: 666 AIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
             + P +C    L+ G CK       + ++   +  GFI +PR  N L+    FSK  K 
Sbjct: 528 RGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG--YFSKMGKM 585

Query: 724 VHAYHLLCRMKSVG-------YDLDAC 743
             A  L+  M++ G       YD+  C
Sbjct: 586 KQAKELMNEMQTKGVSPTCTTYDILIC 612



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 225/525 (42%), Gaps = 66/525 (12%)

Query: 57  RKRLRSFASNSAVISMLLKPNGFDLYWQ--TLDELRSGNVSVVSDVFFVL---ISGYYKV 111
           RK +   A  +     +L    F   WQ   LD         + D  F+L   ++   + 
Sbjct: 174 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 233

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  E+A E   KM     +PD+  Y  +++   +      AL +  EM   N + +IVTF
Sbjct: 234 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 293

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           ++LIN L K GK++    +   M + G+ P+  TY  +++G  +      A  L+ +MK 
Sbjct: 294 NVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 352

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
               P+ +  N ++NG C+  R++ A+ +L+     G  P   +Y  L++   +++R D 
Sbjct: 353 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 412

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
               +  +   +++ D  +Y ++I  L + G  + A  +L DM ERGI+ DT  YNALI 
Sbjct: 413 ILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIH 472

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
           G+C    L +A      +      P+  T+ +L+ G+ + G++ +A  L ++++K G  P
Sbjct: 473 GYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVP 532

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +   +  L+ G CK                 +N    LR+                   Y
Sbjct: 533 NACTYETLMCGHCKV----------------RNTKECLRI-------------------Y 557

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C             ++   G +P    YN LI  F K+G +  A +L  E+Q KG+ P  
Sbjct: 558 C-------------EMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTC 604

Query: 532 VTYGTLING------------LQRVDREEDAFRIFGQMPQNGCTP 564
            TY  LI G              ++    +A R+F +M   G  P
Sbjct: 605 TTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 649



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 23/293 (7%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   QT + L +  + V  DV+ +LIS   K+G   KA      M+E     D   YNA+
Sbjct: 411 DTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNAL 470

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           ++          A   Y  M+     P+I T++LL+ GLSK+G    A  +L E+ +RG+
Sbjct: 471 IHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGL 530

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +PN  TY  ++ G C++    E  R++ +M   G  P   AYN L+  F K+ ++ +A  
Sbjct: 531 VPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKE 590

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L+   +  G  P   +Y  LI G          +    KM      PD+   G  ++   
Sbjct: 591 LMNEMQTKGVSPTCTTYDILICG----------WCNLLKM------PDL---GSTLKISY 631

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            A    +A +L  +M +RG VP       +   F   G    AR L    +KR
Sbjct: 632 RA----EAKRLFIEMNDRGFVPCESTQACISSTFAAPGKKADARMLLKSTYKR 680


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 233/502 (46%), Gaps = 13/502 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  DE+++         F  L+  Y K    ++A+E   +M+   C P V  YN++++  
Sbjct: 246 QVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSY 305

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +  L   A+A+  EM      P++VT++ LI+GL ++GK + AI   DEM + G  PN 
Sbjct: 306 VKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNL 365

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I       +  E   +F + + +G  PD V +N LL  F +     E   + + 
Sbjct: 366 CTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKE 425

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +K G++P   +Y  LI    R   +D A   Y++M E  I PDV  Y  ++  L+  G+
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGR 485

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            + A KL ++M ER   PD Y Y++L+  + +   LD+ ++L  +I+     P+      
Sbjct: 486 WEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+    +   + +A+K F ++ +  C   + + NA++    K   + K   +   M   K
Sbjct: 546 LVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLM---K 602

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
              + L            A+  +++  Y   G   K   IL ++  SG  PD  +YN++I
Sbjct: 603 ESAINL----------SAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 652

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
             + + G +  A +LF E++  GL+PD VTY   +         E+A  +   M   GC 
Sbjct: 653 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 712

Query: 564 PSPAVYKSLMTWSCRRRKFSLA 585
           P+   Y S++   CR  K + A
Sbjct: 713 PNERTYNSIVEGYCRNGKLTDA 734



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/593 (24%), Positives = 261/593 (44%), Gaps = 23/593 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL-FLLALAVYYE 158
            +  L+S + + G    A+  F +M +   QP +  YN VL++  +  + +   + +   
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    P+  T++ LI+   +    + A ++ DEM   G  P+K T+  ++    +  R
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            DEA  +  +M+  GC P  V YN+L++ + K   +++A+AL +  E  G  P + +Y+ 
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 335

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL RA + D A   Y +M     +P++  Y  +I+     GK  + M +  + R  G
Sbjct: 336 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 395

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            VPD   +N L+  F   GL  +   +  E+ K   +P   T+  LI    R G+ D A 
Sbjct: 396 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 455

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNR 457
           +++ +M +AG +P V  +NA++  L + G  E+A  LF +ME     P            
Sbjct: 456 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP------------ 503

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D+ S  +++  Y  A  + K   +   +      P      +L+    KV N+  A K
Sbjct: 504 --DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEK 561

Query: 518 LFKELQLKGLRPDSVTYGTLIN--GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            F EL+ K    D      +++  G  R+ R+ +  +I   M ++    S A Y SLM  
Sbjct: 562 AFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE--KILSLMKESAINLSAATYNSLMHM 619

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDF 633
             R        ++ L  ++    R D    +  I  + +KG+++ A +   EM       
Sbjct: 620 YSRLGDCEKCENI-LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKP 678

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            +  Y I++     +   +EA+ +   +V         +   ++ G C+ G L
Sbjct: 679 DVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 731



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 203/424 (47%), Gaps = 18/424 (4%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           LA     E+     L +    +  I  ++++G+   A  +LD        P+   YT ++
Sbjct: 106 LAAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG----PDAGAYTALV 161

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV-DEALALLRSFEKDGF 269
           S   +  R  +A  +F +M DSG  P  V YN +L+ + K+     E + L+ S ++ G 
Sbjct: 162 SAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGV 221

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +Y+ LI    R   Y EA   + +M     EPD V +  ++    +A +  +A++
Sbjct: 222 APDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIE 281

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           ++ +M   G  P    YN+LI  +   GLL+QA +L+ E+  +   P+  T+T LI G+ 
Sbjct: 282 VIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLD 341

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G +D A   +++M + GC P++  +NALI      G+  +   +F +           
Sbjct: 342 RAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF---------- 391

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
              +    V D  +  T++  +   GL  +   +  ++ ++G +P+  TY SLI+ + + 
Sbjct: 392 ---RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 448

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G  + A++++K +   G+ PD  TY  +++ L R  R E A ++F +M +  C P    Y
Sbjct: 449 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSY 508

Query: 570 KSLM 573
            SL+
Sbjct: 509 SSLL 512



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 24/387 (6%)

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+ EA ALL +       P  G+Y+ L+    RA R+ +A A +R+M +  ++P +V Y 
Sbjct: 138 RLAEASALLDAAPG----PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYN 193

Query: 313 VMIRGLSE-AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           V++   S+ A   K+ ++L++ M+E G+ PD Y YN LI       L  +A  +  E+  
Sbjct: 194 VVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA 253

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P+  TF  L+    +    D+A ++  +ME+ GC PSV  +N+LI    K G LE+
Sbjct: 254 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 313

Query: 432 ANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  L  +ME+ G  P              D  +  T++     AG I  A     ++  +
Sbjct: 314 AVALKQEMEVKGMKP--------------DVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 359

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P++ TYN+LI      G     + +F E +  G  PD VT+ TL+    +   + + 
Sbjct: 360 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 419

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +F +M + G  P    Y SL++   R   F LA  ++ + +      D  +  ++   
Sbjct: 420 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 479

Query: 611 LQKG----EVENAIQGLLEMDFKLNDF 633
           L +G    + E     + E D K +++
Sbjct: 480 LARGGRWEQAEKLFAEMEERDCKPDEY 506



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 175/410 (42%), Gaps = 78/410 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI---------------AF 144
            +  LISG  + G  + A+  + +M    C+P++  YNA++ +                F
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391

Query: 145 RKQLF---------LLAL-----------AVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           R   F         LLA+            V+ EM K   +P   T+  LI+  S+ G  
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           ++A+++   M + GI P+  TY  V+S L +  R ++A +LF +M++  C PD  +Y++L
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL-------------------FR 285
           L+ +   +R+D+    +++   D +  R+  ++ L+  L                    R
Sbjct: 512 LHAYANAKRLDK----MKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567

Query: 286 AKR-------YDEAYAWYRK-------------MFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            KR        +   + Y K             M E  I      Y  ++   S  G  +
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 627

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
               +L++++  G+ PD Y YN +I  +   G + +A  L  E+      P+  T+ I +
Sbjct: 628 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 687

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
                N M ++A +L   M   GC P+   +N++++G C+ G+L  A + 
Sbjct: 688 KSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIF 737



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 35/291 (12%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL  Q    +    +      +  ++S   + G  E+A + F +M+E DC+PD Y Y++
Sbjct: 451 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 510

Query: 139 VLNI---AFR-----------------------KQLFLL---------ALAVYYEMVKLN 163
           +L+    A R                       K L L+         A   + E+ +  
Sbjct: 511 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 570

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  +I   + +++   K+       K+L  M +  I  +  TY  ++    ++   ++  
Sbjct: 571 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 630

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  ++K SG  PD  +YN ++  + +  ++ EA  L    +  G  P + +Y+  +   
Sbjct: 631 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 690

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
                ++EA    R M  +  +P+   Y  ++ G    GK+ DA   +S++
Sbjct: 691 VSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 741


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 249/529 (47%), Gaps = 23/529 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V+ +L+K    +      DEL +    +   +   L+ GY    +  KAL+ F +   
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P    Y  ++     + +   A  +  +M     LP+   F+++I GL      + 
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  EM   GI P+ FTY I+I  LCQ  +  EA  L+ KM ++G  P  V Y++LL 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +C    +DEA+ L       GF P + +Y+ L+ G      +D+AYA   +M +  +  
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   Y  +I GL   G+V +  ++L      G VP    YN++I GF   G++  A ++ 
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   PN  T+T  I G C+    D A K+ N +   G  P +  +N+LI G C+ 
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQE 609

Query: 427 GELEKA-NLLFYKMEIGKNPTLF-----------LRLSQGGNRVHDK----------ASL 464
           G +  A  +L   ++ G  P +            L++ +   R+++K          A+ 
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATY 669

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T+++ +   G +  A K+  ++   GN+PD IT+ +L +G C+ G+I+ A KL  E+  
Sbjct: 670 TTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNR 729

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +RP+ + Y  LING  R  + ++AFR+  +M +    P    Y  L+
Sbjct: 730 LDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 168/640 (26%), Positives = 293/640 (45%), Gaps = 61/640 (9%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D ++++ V+   F++ ++  A+ ++ EM      P+    S+ I  L K      A+ +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +M   G +P  FT+  V+  L +  R +EA  +  ++  +G     V    L++G+C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           R V +AL +     +DG VP   +Y+ LI G       ++AY   R+M +  + P    +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            ++I+GL      KDA+ L  +M + GI PD + YN LI   C    + +A +L  ++ +
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P   T+  L+   C NG +D+A KL+ +M   G  P+V  +  L+ G       +K
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  L  +M+            Q G   +D  +  T++   C  G + +  ++L +    G
Sbjct: 475 AYALLAEMK------------QNGVSCNDY-TYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            +P  +TYNS+INGF K G +  A  +++++  KG+ P+ VTY + I+G  +    + A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD------------ISGR 599
           ++   +   G  P  A Y SL+   C+    S A  + +  L+D            I+G 
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
             +++K +EE L+    E  I+  +++D        A YT  + G  +DG V  AL ++S
Sbjct: 642 --KNLKMMEEALRL--YEKMIKEGIDLD-------TATYTTLIDGFSKDGNVTFALKLYS 690

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRG-------------YLDLAMDVFLYT------LKNG 700
            +V    I    +   L HGLC+ G              LD+  +V +Y       L+NG
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 701 FILRP-RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
            +    R+ + +L   +   D      Y +L  MKS+G D
Sbjct: 751 KLQEAFRLHDEMLERKIMPDDT----TYDILVGMKSLGSD 786



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/603 (24%), Positives = 285/603 (47%), Gaps = 25/603 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V+    K   +D   +  DE+ +  +     V  V I+   K+ D  +AL    KM++  
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P  + +N+V+++  +      AL +  E++      ++V  + L++G     +   A+
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + +E  + G++P   TYT++I G  +    ++AY L  +M+D G  P    +N ++ G 
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
              +   +A++L +     G +P   +Y+ LI  L + ++  EA   + KM E  ++P +
Sbjct: 363 LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++      G + +A+KL ++M  +G  P+   Y  L+KG  +    D+A +L  E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +     N +T+  LI G+C  G V +  ++  + E  G  P+   +N++I+G  KAG 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +  A  ++ +M   G  P +               +  + ++ YC       A K+L  +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNI--------------VTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDI  YNSLI GFC+ GN++ AL++   +   GL P+   Y + I G + +   
Sbjct: 588 RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           E+A R++ +M + G     A Y +L+    +    + A  L+ + +   +  D  +  ++
Sbjct: 648 EEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 608 EEFL-QKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
              L + G++++A + L EM    N   + P    Y + + G  ++G+++EA  +   ++
Sbjct: 708 THGLCRNGDIDDARKLLDEM----NRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 663 ECK 665
           E K
Sbjct: 764 ERK 766



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 10/332 (3%)

Query: 61  RSFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           + F  N    + L+K +     FD  +  L E++   VS     +  LI+G   VG   +
Sbjct: 450 KGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVG---R 506

Query: 117 ALESFGKMKEFDCQ---PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
             E    +K F+ +   P    YN+++N   +  +   A AVY +M      PNIVT++ 
Sbjct: 507 VCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            I+G  K+   ++A+KML+++  +G+ P+   Y  +I G CQ      A ++ + M   G
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG 626

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+   YN+ + G+  L+ ++EAL L     K+G      +Y+ LIDG  +      A 
Sbjct: 627 LLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFAL 686

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             Y +M  +   PD + +  +  GL   G + DA KLL +M    I P+   YN LI G+
Sbjct: 687 KLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGY 746

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
              G L +A  L  E+ +R  +P+  T+ IL+
Sbjct: 747 LRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 233/559 (41%), Gaps = 62/559 (11%)

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM  +G   + + + +V+    +    D+A RLF +M  S   PD    +  +   CKLR
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
             + AL +LR  +  GFVP   +++ ++D L +  R +EA     ++     +  VVL  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ G     +V+ A+ +  +    G+VP                               
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDV---------------------------- 318

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
                  T+T+LI G    GM + A +L  +M   G  PS   FN +I GL      + A
Sbjct: 319 -------TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             LF +M     P  F              +   ++   C    I +A  +  ++ E+G 
Sbjct: 372 VSLFKEMADSGIPDAF--------------TYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P I+TY+SL+  +C  G ++ A+KL+ E+  KG  P+ VTY TL+ G       + A+ 
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM---KSIEE 609
           +  +M QNG + +   Y +L+   C   +      +  ++  +  G    +M     I  
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF--ETEGFVPTAMTYNSIING 535

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F++ G + +A     +M  K     +  YT ++ G C+      AL + +  V CK +  
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND-VRCKGLRP 594

Query: 670 PPSCV-KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV--HA 726
             +    LI G C+ G +  A+ V +  LK+G +  P +  Y   S +    N K+   A
Sbjct: 595 DIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLL--PNISVY--NSFITGYKNLKMMEEA 650

Query: 727 YHLLCRMKSVGYDLDACLY 745
             L  +M   G DLD   Y
Sbjct: 651 LRLYEKMIKEGIDLDTATY 669


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 232/442 (52%), Gaps = 16/442 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            F  LI G +     + A+  F K+ +E  C+P+  +Y  V+N   +K     A  +   
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M + +  PN  T++++I+   K G  + A  +L+EM Q+ I P+ FTY+ +I  LC++++
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +    LFL+M      P+   +N++++G CK  +V++A  ++R   + G  P + +Y+ 
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG     + D A   +  M  + IEPD++ Y ++I G +   K+ +AM++  ++ ++G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P     N L+ G  +LG    A++   E+     +P+ +T   L+ G  +NG+V++A 
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNR 457
             F+K+E+     ++ ++ A+IDGLCK G+L+KA+  F K+  IG +P            
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHP------------ 491

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   M+  YC  GL+ +A  +L ++ ++G L D  TYN ++ GF +   ++    
Sbjct: 492 --DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKA 549

Query: 518 LFKELQLKGLRPDSVTYGTLIN 539
             +E+  K    ++ T   L++
Sbjct: 550 FLEEIAGKSFSFEAATVELLMD 571



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 241/521 (46%), Gaps = 53/521 (10%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A   F +M      P V  ++ +L      + +   ++++ E+ KL    +    S++
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSG 233
           +N      +T++   +L    ++GI  N+ T+T +I GL   N+  +A  LF K+ +++ 
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLR-------------------SFEKDGFV---- 270
           C P+ V Y  ++NG CK     +A  LLR                   +F KDG +    
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 271 ------------PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
                       P + +YS LID L +  +++     + +M    I P+V  +  +I GL
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            + GKV+DA +++  M E+G+ PD   YN +I G+   G +D+AR +   +  +   P+ 
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDI 353

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            ++ ILI G  R   +D+A ++  ++ + G  PS+   N L+ GL + G  + A   F +
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           M           LS G   + D  +  T++  Y   GL+ +A     +L       +I  
Sbjct: 414 M-----------LSAG--HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y ++I+G CK G ++ A   F++L L GL PD +TY  +I+G  +    ++A  +  +M 
Sbjct: 461 YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
            NGC      Y  ++    R  K S   +    +L +I+G+
Sbjct: 521 DNGCLADNRTYNVIVRGFLRSNKVSEMKA----FLEEIAGK 557



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 235/514 (45%), Gaps = 23/514 (4%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A+ LF +M  +   P   +++ LL     ++     ++L R   K          S +
Sbjct: 54  DDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIV 113

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERG 338
           ++      R D  ++     F++ I  + V +  +IRGL    KVKDA+ L   + RE  
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+   Y  ++ G C  G   +A  L   + +  + PNT T+TI+I   C++GM+D A 
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGAT 233

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L N+M++    P +  ++ LID LCK  + E    LF +M         + L    N  
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM---------IHL----NIY 280

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +  +  ++++  C  G +  A +I+  + E G  PD+ITYN +I+G+   G ++ A ++
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT--WS 576
           F  +  K + PD ++Y  LING  R  + ++A ++  ++ Q G  PS      L+   + 
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400

Query: 577 CRRRKFSLAF---SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             R K +  F    L   ++ D+          +  + + G VE A+    +++ +  D 
Sbjct: 401 LGRTKSAQNFFDEMLSAGHIPDLYTH----CTLLGGYFKNGLVEEAMSHFHKLERRREDT 456

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            +  YT  + GLC++G++ +A   F  L          +   +I G C+ G LD A D+ 
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516

Query: 694 LYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
                NG +   R  N ++R  L S    ++ A+
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 202/418 (48%), Gaps = 2/418 (0%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYW 83
           P+  F+    V S  +  +   +GF       K+    +  + + +I  L   N      
Sbjct: 104 PVHEFILSIVVNSCCLMHRT-DLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAV 162

Query: 84  QTLDELRSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
               +L   N+   ++V +  +++G  K G  +KA +    M++   +P+   Y  V++ 
Sbjct: 163 HLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDA 222

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +  +   A ++  EM + +  P+I T+S LI+ L K  + E    +  EM    I PN
Sbjct: 223 FCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPN 282

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+  VI GLC+  + ++A  +   M + G  PD + YN +++G+    +VD A  +  
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFD 342

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           S       P + SY+ LI+G  R K+ DEA    R++ ++ ++P +V   V++ GL E G
Sbjct: 343 SMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELG 402

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           + K A     +M   G +PD Y +  L+ G+   GL+++A S   ++ +R    N   +T
Sbjct: 403 RTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
            +I G+C+NG +D A   F K+   G  P V  + A+I G C+ G L++A  +  KME
Sbjct: 463 AVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 180/354 (50%), Gaps = 4/354 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDL    L  +  G+    +  + ++I  + K G  + A     +MK+    PD++ Y+
Sbjct: 197 AFDL----LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   +   +     ++ EM+ LN  PN+ TF+ +I+GL K GK E A +++  M ++
Sbjct: 253 TLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ P+  TY ++I G     + D A  +F  M +    PD ++YN L+NG+ + +++DEA
Sbjct: 313 GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEA 372

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + + R   + G  P + + + L+ GLF   R   A  ++ +M      PD+  +  ++ G
Sbjct: 373 MQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGG 432

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G V++AM     +  R    +   Y A+I G C  G LD+A +   ++      P+
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPD 492

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
             T+T +I G C+ G++D+A+ +  KME  GC      +N ++ G  ++ ++ +
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 230/482 (47%), Gaps = 49/482 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI G    G+ EKA E + +MK     P V+  N++L    +  L+  A  ++ E 
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V    + NI T++++++ L K GK + A  +LD M  +G++PN  +Y  +I G C+    
Sbjct: 462 VDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 520

Query: 220 DEAYRLFLKMKDSGCSPDFVAY-----------------------------------NAL 244
           D A  +F  M      P+ V Y                                   N +
Sbjct: 521 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 580

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG CK+ ++ EA   L++F ++GF+P   +Y+ ++DG  +    D A A YR+M E  +
Sbjct: 581 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 640

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+VV Y  +I G  ++ ++  A+K   +MRE+G+  D   Y+ALI GFC    ++ A+ 
Sbjct: 641 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 700

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +    PN   +  +I G      ++ A   + KM        +G +  LIDGL 
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K G L  A+ L+ +M           LS+G   V D  +   +V   C  G +  A KIL
Sbjct: 761 KEGRLVFASDLYMEM-----------LSKG--IVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++      P ++ YN+LI G+ + GN+  A  L  E+  +GL PD VTY  LING  + 
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 867

Query: 545 DR 546
           DR
Sbjct: 868 DR 869



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 265/566 (46%), Gaps = 25/566 (4%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           + +   + K  N  +G        +R  + S A+ ++VI   +         +  +E+ +
Sbjct: 299 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 358

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
               +   V   L+ GY   G+ + AL  F K+ E    P+   Y+ ++           
Sbjct: 359 CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK 418

Query: 152 ALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           A  +Y +M KLN +P ++   + L+ G  K+   E A K+ DE    G+  N FTY I++
Sbjct: 419 ASELYTQM-KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMM 476

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S LC+  + DEA  L   M + G  P+ V+YN ++ G C+   +D A ++          
Sbjct: 477 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 536

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +YS LIDG F+    ++A   + +M    I P    +  +I GL + G++ +A   
Sbjct: 537 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L +  E G +P    YN+++ GF   G +D A ++  E+ +    PN  T+T LI G C+
Sbjct: 597 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFL 449
           +  +D A K  ++M + G    V  ++ALIDG CK  ++E A  LF++ +E+G +P   +
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716

Query: 450 RLSQ-GGNR---------------VHDK-----ASLQTMVEQYCTAGLIHKAYKILMQLA 488
             S   G R               ++D+      +  T+++     G +  A  + M++ 
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G +PDIIT++ L+NG C  G +  A K+ +E+  K + P  + Y TLI G  R    +
Sbjct: 777 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 836

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +AF +  +M   G  P    Y  L+ 
Sbjct: 837 EAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 186/744 (25%), Positives = 320/744 (43%), Gaps = 83/744 (11%)

Query: 13  DTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWA-AKRKRLRSFASNSAVIS 71
           DTV P     +   P      + +++    +PQ   R+F  A  +R  +R   +   ++ 
Sbjct: 84  DTV-PTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLH 142

Query: 72  MLLK-PNGFDLYWQTLDELRSGNVSVVSDVFFV---------------------LISGYY 109
           +L++ P       + L+   SG+ S  S V FV                     L++ Y 
Sbjct: 143 ILMRSPETHGHARKLLNRYVSGD-SDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYI 201

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +    E A++ F  M   D  P V   N +L    R+ +      +Y +MV      +  
Sbjct: 202 RANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHF 261

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T  +++    K G+ E A +   E  +RG+  +   Y+I+I  +C+   ++    L  +M
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 230 KDSGCSP-----------------------------------DFVAYNALLNGFCKLRRV 254
           K+ G  P                                   + V   +L+ G+C    +
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D AL L     +DG  P   +YS LI+G   +   ++A   Y +M    I P V     +
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +RG  +A   ++A KL  +  + G V + + YN ++   C  G +D+A SL   +  +  
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           +PN  ++  +I G CR G +D A  +F+ M      P+V  ++ LIDG  K G+ EKA  
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LF +M  +   PT F              +  T++   C  G + +A   L    E G +
Sbjct: 561 LFDQMLSLNIAPTDF--------------TFNTIINGLCKVGQMSEARDKLKNFLEEGFI 606

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P  +TYNS+++GF K GNI+ AL +++E+   G+ P+ VTY +LING  + +R + A + 
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 666

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQ 612
             +M + G       Y +L+   C+RR    A  L+ + L   +S         I  F  
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 726

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              +E A+    +M        L  YT  + GL ++G++  A +++  ++  K IV  P 
Sbjct: 727 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS-KGIV--PD 783

Query: 673 CVK---LIHGLCKRGYLDLAMDVF 693
            +    L++GLC +G L+ A  + 
Sbjct: 784 IITFHVLVNGLCNKGQLENARKIL 807



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 268/578 (46%), Gaps = 17/578 (2%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E +   V + +  + ++I    K  +    LE   +MKE    P    + +V+     + 
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             + AL +  EM+      N+V  + L+ G    G  + A+ + +++T+ G+ PNK TY+
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I G C     ++A  L+ +MK +G  P     N+LL G+ K    +EA  L      D
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVD 463

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             V  + +Y+ ++  L +  + DEA +    M  + + P+VV Y  MI G    G +  A
Sbjct: 464 CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 523

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             + SDM  R + P+   Y+ LI G    G  ++A  L  ++   +  P   TF  +I G
Sbjct: 524 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 583

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
           +C+ G + +A+       + G  PS   +N+++DG  K G ++ A  ++ +M E G +P 
Sbjct: 584 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 643

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  +++  +C +  I  A K   ++ E G   D+  Y++LI+GF
Sbjct: 644 V--------------VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 689

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK  ++  A  LF EL   GL P+ + Y ++I+G + ++  E A   + +M  +      
Sbjct: 690 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 749

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLE 625
             Y +L+    +  +   A  L+++ L      D  +   +   L  KG++ENA + L E
Sbjct: 750 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 809

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           MD K     +  Y   + G  ++G +KEA  +   +++
Sbjct: 810 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 15/362 (4%)

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFF---------------VLISGYYKVGDCEKALES 120
           PN        L   R GN+ + S VF                +LI G +K GD EKAL+ 
Sbjct: 502 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 561

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F +M   +  P  + +N ++N   +      A       ++   +P+ +T++ +++G  K
Sbjct: 562 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 621

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A+ +  EM + G+ PN  TYT +I+G C+ NR D A +   +M++ G   D  A
Sbjct: 622 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 681

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+AL++GFCK R ++ A  L     + G  P    Y+ +I G       + A  WY+KM 
Sbjct: 682 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            ++I  D+  Y  +I GL + G++  A  L  +M  +GIVPD   ++ L+ G C+ G L+
Sbjct: 742 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 801

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            AR +  E+ +++  P+   +  LI G  R G + +A  L ++M   G  P    ++ LI
Sbjct: 802 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861

Query: 421 DG 422
           +G
Sbjct: 862 NG 863



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 245/537 (45%), Gaps = 23/537 (4%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            F+ L+N   ++ + E AI   + M  + ++P      I+++ L + N   E   L+ KM
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G   D    + ++    K  RV+EA    R  ++ G     G+YS +I  + +    
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +       +M E    P    +  +I      G + +A++L  +M   G   +     +L
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +KG+C  G LD A +L  +I +    PN  T+++LI G C +G ++ A +L+ +M+  G 
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PSV   N+L+ G  KA   E+A+ LF +        +F              +   M+ 
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF--------------TYNIMMS 477

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + +A  +L  +   G +P++++YN +I G C+ GN++ A  +F ++  + L+P
Sbjct: 478 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 537

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           + VTY  LI+G  +    E A  +F QM      P+   + +++   C+  + S A    
Sbjct: 538 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 597

Query: 590 LQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIG 644
             +L +       +  SI + F+++G +++A+    EM     +F ++P    YT  + G
Sbjct: 598 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM----CEFGVSPNVVTYTSLING 653

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            C+  ++  AL     + E    +   +   LI G CKR  ++ A D+F   L+ G 
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 233/535 (43%), Gaps = 34/535 (6%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D   +N LLN + +  R++ A+    +      +P +   + L+  L R     E    Y
Sbjct: 189 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 248

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM    I  D     VM+R   + G+V++A +   + +ERG+  D   Y+ +I+  C  
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
              +    L  E+ +R  +P+  TFT +I      G + +A +L  +M   G   ++ + 
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            +L+ G C  G L+ A  LF K+ E G  P              +K +   ++E  C +G
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFP--------------NKVTYSVLIEGCCNSG 414

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I KA ++  Q+  +G  P +   NSL+ G+ K      A KLF E    G+  +  TY 
Sbjct: 415 NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYN 473

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-R 594
            +++ L +  + ++A  +   M   G  P+   Y  ++   CR+    +A S++   L R
Sbjct: 474 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 533

Query: 595 DISGRDDESMKSIEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           D+          I+   +KG+ E A+     +L ++    DF    +   + GLC+ GQ+
Sbjct: 534 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT---FNTIINGLCKVGQM 590

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            EA +     +E   I   PSC+    ++ G  K G +D A+ V+    +  F + P V 
Sbjct: 591 SEARDKLKNFLEEGFI---PSCMTYNSIVDGFIKEGNIDSALAVYREMCE--FGVSPNVV 645

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
            Y      F K N+   A      M+  G +LD   Y    +L+ G    R+ME+
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY---SALIDGFCKRRDMES 697



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 2/223 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+   K N  DL  +T DE+R   + +    +  LI G+ K  D E A + F ++ E
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTE 185
               P+  +YN++++  FR    + A  V+Y+ +  + +P ++ T++ LI+GL K G+  
Sbjct: 708 VGLSPNRIVYNSMIS-GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 766

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A  +  EM  +GI+P+  T+ ++++GLC   + + A ++  +M     +P  + YN L+
Sbjct: 767 FASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 826

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            G+ +   + EA  L       G VP   +Y  LI+G F+  R
Sbjct: 827 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 123/251 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++   +K    D       E+    VS     +  LI+G+ K    + AL++  +M+E
Sbjct: 613 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 672

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + DV  Y+A+++   +++    A  +++E++++   PN + ++ +I+G       E 
Sbjct: 673 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEA 732

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+    +M    I  +  TYT +I GL +  R   A  L+++M   G  PD + ++ L+N
Sbjct: 733 ALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN 792

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C   +++ A  +L   ++    P +  Y+ LI G FR     EA+  + +M +  + P
Sbjct: 793 GLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVP 852

Query: 307 DVVLYGVMIRG 317
           D V Y ++I G
Sbjct: 853 DDVTYDILING 863



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 80  DLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           DLY + L +       +V D+  F VL++G    G  E A +   +M   +  P V IYN
Sbjct: 770 DLYMEMLSK------GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYN 823

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            ++   FR+     A  ++ EM+    +P+ VT+ +LING  K  ++
Sbjct: 824 TLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 158/632 (25%), Positives = 291/632 (46%), Gaps = 55/632 (8%)

Query: 91  SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           SG+  VV+  +  L++GY + G    A      M      P+ Y  + +L      + + 
Sbjct: 166 SGSADVVT--YNTLVAGYCREGRLNDARRLVADMPF---APNSYTNSTLLKGLCSNKEWD 220

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A  +  EM++  C PN +TF ++I+ L ++G  + A+ +LD+M++         Y  +I
Sbjct: 221 DAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEII 280

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S L ++ R +EA  LF +M    C PD  +YN ++ G C+  R ++A  L+    +    
Sbjct: 281 SCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCP 337

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   +++ +I  L      D A     +M +   +PD   Y  ++  LSE G V DA++L
Sbjct: 338 PDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL 397

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  +  +   P+T CY +++KG C     D    L  E+ +     +  TF ++I  +C+
Sbjct: 398 LRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQ 454

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G+VD   ++  +M K GC P + ++N+LI+G  + G ++ A  LF  M   +N   +  
Sbjct: 455 KGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVVTYNY 514

Query: 451 LSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           + +G  R                     ++ +  T++   C  G +  A ++  ++ +  
Sbjct: 515 MLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYN 574

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            +P++I Y++LING      ++ ALKL  ++  K   PD++ Y   + GL R +R EDA 
Sbjct: 575 CMPNVIIYSTLINGLSDQECVDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAG 631

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRR---RKFSLAFSLWLQYLRDISGRDDESMKS-- 606
            +  +M +  C P    +  L+   C +      +    L L+Y         E M +  
Sbjct: 632 ELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKY---------ECMPNVF 682

Query: 607 -----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                I  F ++   E+A+Q L  M  + +      Y+  L GLC+  + ++A  + + +
Sbjct: 683 IYSSLINGFAEQYRAEDALQLLRNMPCEPDTIC---YSAALKGLCRAKRWEDARELIAEM 739

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              +  +   +   LI  LC+ G +D+A +VF
Sbjct: 740 FRKQCPLDEATFSMLIGSLCQNGLVDMATEVF 771



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/543 (25%), Positives = 255/543 (46%), Gaps = 33/543 (6%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L +    D     LD++     +    V+  +IS   ++G  E+AL  F +M    
Sbjct: 244 IIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMP--- 300

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+PD++ YN V+    R   +  A  +   MV+ +C P+ VTF+ +I+ L   G  + A+
Sbjct: 301 CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAM 360

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +++++M + G  P+ FTY+ +++ L +    D+A  L   +      P+ V Y ++L G 
Sbjct: 361 EVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLKGL 417

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+  R D+   L+    ++       ++  +ID L +    D      R+M +    PD+
Sbjct: 418 CRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDI 477

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMR-ERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           ++Y  +I G SE G V DA++L  +M  +R +V     YN ++KG C     + A  L  
Sbjct: 478 IIYNSLINGFSENGSVDDALELFKNMSCKRNVVT----YNYMLKGLCRAEQWEDAGKLVA 533

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ K + LPN  TF+ LI  +C+ G V+ A ++F KM K  C P+V +++ LI+GL    
Sbjct: 534 EMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQE 593

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQG-------------------GNRVHDKASLQTMV 468
            ++ A  L   M    +   +    +G                    N + D+ +   ++
Sbjct: 594 CVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILI 653

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G +  A ++   + +   +P++  Y+SLINGF +      AL+L + +  +   
Sbjct: 654 NNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCE--- 710

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD++ Y   + GL R  R EDA  +  +M +  C    A +  L+   C+     +A  +
Sbjct: 711 PDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEV 770

Query: 589 WLQ 591
           + Q
Sbjct: 771 FEQ 773



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/597 (24%), Positives = 274/597 (45%), Gaps = 86/597 (14%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN-RADEAYR 224
           P  V  +LLI  L  +G+ + A ++L   ++R    +  T   +++G C+   R  +A R
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLG-ASERAGTADAVTRNTLVAGYCRAGGRLADAER 158

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +   +  SG S D V YN L+ G+C+  R+++A  L+       F P   + S L+ GL 
Sbjct: 159 MLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLC 214

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE----RGIV 340
             K +D+A     +M      P+ + +G++I  L + G    AM +L  M +    RG++
Sbjct: 215 SNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVI 274

Query: 341 ----------------------------PDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
                                       PD + YN ++KG C  G  + A +L   + ++
Sbjct: 275 VYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRK 334

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           D  P+  TF  +I  +C  G+VD A ++  +M K GC P    ++AL++ L + G ++ A
Sbjct: 335 DCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDA 394

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVH-------------------DKASLQTMVEQYCT 473
             L   +    N   +  + +G  R                     D+ +   +++  C 
Sbjct: 395 LELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQ 454

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            GL+    ++L ++ + G  PDII YNSLINGF + G+++ AL+LFK +  K    + VT
Sbjct: 455 KGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR---NVVT 511

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW---- 589
           Y  ++ GL R ++ EDA ++  +M ++ C P+   + +L+++ C++     A  ++    
Sbjct: 512 YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMP 571

Query: 590 --------LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
                   + Y   I+G  D+             V++A++ L +M  K +      Y+  
Sbjct: 572 KYNCMPNVIIYSTLINGLSDQEC-----------VDDALKLLNDMPCKPDTIC---YSAA 617

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
           L GLC+  + ++A  +   ++    +    +   LI+ LC +G+L+ A +V    LK
Sbjct: 618 LKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLK 674



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 134/525 (25%), Positives = 234/525 (44%), Gaps = 89/525 (16%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  ++ G  + G  E A      M   DC PD   +N V++    + L   A+ V  +M 
Sbjct: 308 YNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMP 367

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K  C P+  T+S L+N LS+ G  + A+++L  +  +   PN   Y  V+ GLC+ +R D
Sbjct: 368 KYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWD 424

Query: 221 EAYRLFLKMKDS-----------------------------------GCSPDFVAYNALL 245
           +  +L  +M  +                                   GCSPD + YN+L+
Sbjct: 425 DVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLI 484

Query: 246 NGFCKLRRVDEALALLRSFE--------------------------------KDGFVPRL 273
           NGF +   VD+AL L ++                                  KD  +P  
Sbjct: 485 NGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNE 544

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            ++S LI  L +    + A   + KM +    P+V++Y  +I GLS+   V DA+KLL+D
Sbjct: 545 VTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLND 604

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  +   PDT CY+A +KG C     + A  L +E+ +++ LP+  TF+ILI  +C  G 
Sbjct: 605 MPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGF 661

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           ++ A ++   M K  C P+V ++++LI+G  +    E A  L   M    +   +     
Sbjct: 662 LESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCEPDTICY----- 716

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                   A+L+ +    C A     A +++ ++       D  T++ LI   C+ G ++
Sbjct: 717 -------SAALKGL----CRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVD 765

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
            A ++F+++ + G  P+   + +L+NG     R ++  ++   MP
Sbjct: 766 MATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSMP 810



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 186/354 (52%), Gaps = 9/354 (2%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L +    D   + L E+     S    ++  LI+G+ + G  + ALE F   K   
Sbjct: 448 IIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMS 504

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C+ +V  YN +L    R + +  A  +  EMVK  CLPN VTFS LI+ L + G  E AI
Sbjct: 505 CKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAI 564

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++ ++M +   +PN   Y+ +I+GL      D+A +L   + D  C PD + Y+A L G 
Sbjct: 565 EVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKL---LNDMPCKPDTICYSAALKGL 621

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+  R ++A  L+    +   +P   ++S LI+ L      + A      M + +  P+V
Sbjct: 622 CRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNV 681

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            +Y  +I G +E  + +DA++LL +M      PDT CY+A +KG C     + AR L  E
Sbjct: 682 FIYSSLINGFAEQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAKRWEDARELIAE 738

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           ++++    +  TF++LI  +C+NG+VD A ++F +M   GC P+  + ++L++G
Sbjct: 739 MFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNG 792



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 6/268 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +IS L +    +   +  +++   N      ++  LI+G   + D E   ++   + +
Sbjct: 548 STLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLING---LSDQECVDDALKLLND 604

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C+PD   Y+A L    R + +  A  +  EM++ NCLP+ VTFS+LIN L   G  E 
Sbjct: 605 MPCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLES 664

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++ + M +   +PN F Y+ +I+G  +  RA++A +L   M    C PD + Y+A L 
Sbjct: 665 ATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAALK 721

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+ +R ++A  L+    +        ++S LI  L +    D A   + +M      P
Sbjct: 722 GLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSP 781

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +  ++  ++ G SE  +V + +KLLS M
Sbjct: 782 NRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 145/343 (42%), Gaps = 72/343 (20%)

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           VE  +    P     T+LI  +C  G +DDA+++    E+AG   +V   N L+ G C+A
Sbjct: 91  VESMRDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAV-TRNTLVAGYCRA 149

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G                                               G +  A ++L  
Sbjct: 150 G-----------------------------------------------GRLADAERMLAS 162

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           LA SG+  D++TYN+L+ G+C+ G +N A +L  ++      P+S T  TL+ GL     
Sbjct: 163 LALSGS-ADVVTYNTLVAGYCREGRLNDARRLVADMPFA---PNSYTNSTLLKGLCSNKE 218

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD----DE 602
            +DA  +  +M ++GC P+   +  ++   C+      A  +  Q  +    R     +E
Sbjct: 219 WDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNE 278

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            +  + E    G VE A+    +M  K + F    Y   + GLC+DG+ ++A  + + +V
Sbjct: 279 IISCLAEL---GRVEEALHLFDQMPCKPDIFS---YNTVMKGLCRDGRWEDAGTLIAGMV 332

Query: 663 --ECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNG 700
             +C     PP  V    +I  LC RG +D AM+V     K G
Sbjct: 333 RKDC-----PPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYG 370


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/575 (27%), Positives = 260/575 (45%), Gaps = 41/575 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           IE   + L+P L  TT+ S++   K P + F F      R     F +    I+++ K +
Sbjct: 63  IEHVTDKLIPSLVSTTLLSLV---KTPDLAFNFVNHIDLR--CLDFQTQCLAIAVVSKLS 117

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISG------------------YYKVGDCEKALE 119
                 Q L E+ S   + V D+F  L+                    Y ++   ++A+E
Sbjct: 118 SPKSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIE 177

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F  MKE    P     N +L++  R      A   Y +M ++    N+ TF+++IN L 
Sbjct: 178 CFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 237

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K GK + A   L  M   GI P   TY  ++ G     R + A  +  +MK  G  PD  
Sbjct: 238 KEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQ 297

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN +L+  C   R  E   +LR  +  G VP   SY+ LI G       + A+A+  +M
Sbjct: 298 TYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEM 354

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            ++ + P    Y  +I GL    K++ A  L+ ++RE+GIV D+  YN +I G+C  G  
Sbjct: 355 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDA 414

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A +L  E+      P   T+T LI  +CR     +A +LF K+   G  P + M N L
Sbjct: 415 KKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTL 474

Query: 420 IDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +DG C  G +++A  L  +M+ +  +P              D  +   ++   C  G   
Sbjct: 475 MDGHCATGNMDRAFSLLKEMDRMNIDP--------------DDVTYNCLMRGLCGEGKFE 520

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A +++ ++   G  PD I+YN+LI+G+ K G+   A  +  E+   G  P  +TY  L+
Sbjct: 521 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            GL +    E A  +  +M   G  P+ + + S++
Sbjct: 581 KGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVI 615



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 215/505 (42%), Gaps = 64/505 (12%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + ++ ++  +C+LR VDEA+      ++ GF P+  + + ++  L R  R + A+ +Y  
Sbjct: 157 ILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYAD 216

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M+  +I+ +V  + +MI  L + GK+K A   L  M   GI P    YN L++G+   G 
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ AR +  E+  +   P+  T+  ++  MC  G    A ++  +M+  G  P    +N 
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNI 333

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           LI G    G+LE A    Y+ E+ K    PT +              +  T++       
Sbjct: 334 LIRGCSNNGDLETA--FAYRDEMVKQGMVPTFY--------------TYNTLIHGLFMEN 377

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I  A  ++ ++ E G + D +TYN +ING+C+ G+   A  L  E+   G++P   TY 
Sbjct: 378 KIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYT 437

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +LI  L R ++  +A  +F ++   G  P   +  +LM   C       AFSL       
Sbjct: 438 SLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL------- 490

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                                      L EMD    D     Y   + GLC +G+ +EA 
Sbjct: 491 ---------------------------LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEAR 523

Query: 656 NIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            +     E K     P  +    LI G  K+G    A  V    L  GF       N LL
Sbjct: 524 ELMG---EMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVG 737
           + L  SK+     A  LL  MKS G
Sbjct: 581 KGL--SKNQDGELAEELLREMKSEG 603



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 151/311 (48%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A E   +MK     PD   YN ++           A A   EMVK   +P   T++ LI
Sbjct: 311 RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLI 370

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL    K E A  ++ E+ ++GI+ +  TY IVI+G CQ   A +A+ L  +M   G  
Sbjct: 371 HGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIK 430

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    Y +L+   C+  +  EA  L       G  P L   + L+DG       D A++ 
Sbjct: 431 PTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSL 490

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            ++M    I+PD V Y  ++RGL   GK ++A +L+ +M+ RGI PD   YN LI G+  
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G    A  ++ E+      P   T+  L+ G+ +N   + A++L  +M+  G  P+   
Sbjct: 551 KGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSS 610

Query: 416 FNALIDGLCKA 426
           F ++I+ + K+
Sbjct: 611 FCSVIEAMSKS 621



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 149/308 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L E++   +   S  + +LI G    GD E A     +M +    P  Y YN +++  
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F +     A  +  E+ +   + + VT++++ING  + G  + A  + DEM   GI P +
Sbjct: 374 FMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQ 433

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           FTYT +I  LC+ N+  EA  LF K+   G  PD V  N L++G C    +D A +LL+ 
Sbjct: 434 FTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKE 493

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            ++    P   +Y+CL+ GL    +++EA     +M    I+PD + Y  +I G S+ G 
Sbjct: 494 MDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 553

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            K A  +  +M   G  P    YNAL+KG       + A  L  E+     +PN  +F  
Sbjct: 554 TKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCS 613

Query: 384 LICGMCRN 391
           +I  M ++
Sbjct: 614 VIEAMSKS 621



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 133/277 (48%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           +  F +     K+  + +F + + +I  L   N  +     + E+R   + + S  + ++
Sbjct: 345 ETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIV 404

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I+GY + GD +KA     +M     +P  + Y +++ +  R+     A  ++ ++V    
Sbjct: 405 INGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGM 464

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P++V  + L++G   +G  + A  +L EM +  I P+  TY  ++ GLC   + +EA  
Sbjct: 465 KPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARE 524

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  +MK  G  PD ++YN L++G+ K      A  +       GF P L +Y+ L+ GL 
Sbjct: 525 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLS 584

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           + +  + A    R+M  E I P+   +  +I  +S++
Sbjct: 585 KNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/355 (20%), Positives = 123/355 (34%), Gaps = 91/355 (25%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +T  F  ++   C+  MVD+A + F  M++ G  P     N ++  L +   +E A + +
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 437 ---YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
              Y+MEI  N                                                 
Sbjct: 215 ADMYRMEIKSN------------------------------------------------- 225

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
             + T+N +IN  CK G +  A      ++  G++P  VTY TL+ G     R E A  I
Sbjct: 226 --VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMI 283

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
             +M   G  P    Y  +++W C   + S       + LR++ G               
Sbjct: 284 ISEMKSKGFQPDLQTYNPILSWMCNEGRAS-------EVLREMKG--------------I 322

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G V +++                 Y I + G   +G ++ A      +V+   + T  + 
Sbjct: 323 GLVPDSVS----------------YNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTY 366

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
             LIHGL     ++ A  +     + G +L     N ++       D KK  A H
Sbjct: 367 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 253/512 (49%), Gaps = 35/512 (6%)

Query: 115 EKALES---FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVT 170
           +KA+E+   F  M +  C+PD  IY+ ++    + +    A  ++ EM   +  P N V 
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++  ++GL KSGK E A +    M Q  +  ++  Y ++I  L +  R D+A    L++ 
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                P     ++++   CK  RVD AL+LL +  K G+ P + ++S LI+ L +A +  
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426

Query: 291 EAYAWYRKMFEEKIEPDVVL---YGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCY 346
           EA  + + M + KI         Y  ++  L +A KV  A  + S M  ER  VPD   Y
Sbjct: 427 EAQEFLQGM-DRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + LI GFC +  L +A  L  ++   + +PN  T+   + G+ R G + DAQ ++ +M  
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------------------- 446
           AGC P V  ++ LI G   A + ++A+ LF  M   G  P                    
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605

Query: 447 ---LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
              LF ++ + G    D+ +  T++  +C  G I +A ++  ++   G+ PD++ YN L+
Sbjct: 606 AHELFRKMVERGCDP-DRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GC 562
            GF + G    A +LF+ +  +  +PD+V++  +I+GL +  R +DA  +F +M Q+ GC
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
           +P    Y SL+   C  ++ S A  ++ +  R
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 155/620 (25%), Positives = 281/620 (45%), Gaps = 52/620 (8%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           D  +AL  F  ++  + + DV+ YN +L+   R +    A  V+ +MV    +PN  T++
Sbjct: 109 DGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA 168

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI---------------- 216
           +L+        ++ A++   EM  +G  P+   Y  V   L                   
Sbjct: 169 VLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEK 228

Query: 217 -------------------NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
                              ++A EA +LF  M  SGC PD   Y+ ++   CKL  +DEA
Sbjct: 229 RVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA 288

Query: 258 LALLRSFEKDGFVPRLG-SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
             L      +   P    +++  + GL ++ + ++A+   R M +E +     +Y ++IR
Sbjct: 289 FKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIR 347

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
            L E+G++  A +   ++  R I P +   +++I+  C  G +D A SL   + KR   P
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEK--AGCFPSVGMFNALIDGLCKAGELEKANL 434
           +  T ++LI  +C+   + +AQ+    M++  +    S   +N+L++ LCKA ++ +A  
Sbjct: 408 DMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFA 467

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           +F  M   ++             V D  S   +++ +C    + +A K+  Q+ +   +P
Sbjct: 468 IFSTMVSERS------------FVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           ++ TYN+ +NG  + G I  A  +++E+   G  PD +TY TLI+G     + + A  +F
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQK 613
             M   GC P+   Y  L+   C+  K   A  L+ + +      D  +  + +  F   
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV 635

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G++E A++   EM  K +D  +  Y   L G  + G+  EA  +F V+V  +      S 
Sbjct: 636 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695

Query: 674 VKLIHGLCKRGYLDLAMDVF 693
             +I GL K   LD A++VF
Sbjct: 696 NIMIDGLSKAKRLDDAVEVF 715



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 171/301 (56%), Gaps = 7/301 (2%)

Query: 95  SVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           S V DV  + +LI G+ K+ +  +A + + +M + +C P+V  YNA LN   RK     A
Sbjct: 477 SFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 536

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             VY EMV   C P+++T+S LI+G S + K + A ++ + M  RG  PN  TY  ++ G
Sbjct: 537 QGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHG 596

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+ ++ DEA+ LF KM + GC PD V Y  LL GFC + ++++A+ +       G  P 
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+CL+ G FRA +  EA   ++ M   + +PD V + +MI GLS+A ++ DA+++  
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716

Query: 333 DM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI----CG 387
            M ++ G  PD   YN+LI G C    L +A  +  EI +    P+ H F +L+    CG
Sbjct: 717 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIKCG 776

Query: 388 M 388
           +
Sbjct: 777 I 777



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 236/543 (43%), Gaps = 39/543 (7%)

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           LR   EAL   R  +   F   + +Y+CL+D L R +   +A   + KM  + + P+   
Sbjct: 107 LRDGGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFT 166

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ-ARSLQVEI 369
           Y V+++         +A++   +M ++G  P +  Y  + +     G   + +R    ++
Sbjct: 167 YAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDL 226

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            KR ++       +L+  + ++  + +A KLF  M K+GC P   +++ ++   CK   L
Sbjct: 227 EKRVAVEMMLKKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 430 EKANLLFYKMEI-GKNP------TLFLR-LSQGGNRVHDKASLQTMVEQYCT-------- 473
           ++A  LF +M +  K P      T FL  L + G       + +TM E   +        
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDML 345

Query: 474 ------AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
                 +G I KA +  +++A     P   T +S+I   CK G ++ AL L + +  +G 
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN--GCTPSPAVYKSLMTWSCRRRKFSLA 585
            PD  T+  LIN L + D+ ++A      M +     + S   Y SL+   C+ +K   A
Sbjct: 406 CPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQA 465

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDF-QLAPYTIWL 642
           F+++   + + S   D    S  I+ F +  E+  A + L +    LN    +  Y  +L
Sbjct: 466 FAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRA-EKLYKQMIDLNCVPNVTTYNAFL 524

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
            GL + G++ +A  ++  +V         +   LIHG       D A ++F   +  G  
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG-- 582

Query: 703 LRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTRE 760
            RP    Y  LL  L   K++K   A+ L  +M   G D D   Y    +LL G  N  +
Sbjct: 583 CRPNAVTYNCLLHGLC--KESKPDEAHELFRKMVERGCDPDRVTYT---TLLYGFCNVGK 637

Query: 761 MEN 763
           +E 
Sbjct: 638 IEQ 640


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 177/728 (24%), Positives = 316/728 (43%), Gaps = 45/728 (6%)

Query: 2    SSTLNEVLTILDTVTPIEPALEPLLPF-LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL 60
            +++L  VL    T      +L  LLP  LS   + + +    +P +      W+      
Sbjct: 805  AASLAGVLATRSTNPTWARSLAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQSPDHH 864

Query: 61   RSFA-----SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
             +       ++S ++ +L +   FD    TL  +     +        L++ Y   G   
Sbjct: 865  VALQDPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLG 924

Query: 116  KALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
            KA E   +++E +   P+V   N +L +   ++ +  A  +Y EM+  +   +  +  +L
Sbjct: 925  KATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVL 984

Query: 175  INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
            + GL    + E  +K+++     G +P+   Y ++I G C+         L  +M+ +G 
Sbjct: 985  VRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGF 1044

Query: 235  SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             P  V Y +L+N   K   +++  +L     K GF P +  Y+ +ID L   +   +A  
Sbjct: 1045 LPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMV 1104

Query: 295  WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              ++MF    +PD++ +  +I GL   G V+ A   L +   R + P+   Y  LI GFC
Sbjct: 1105 ILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFC 1164

Query: 355  DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
              G L  A  L VE+  R   P+  TF  LI G+   G V +A  +  KM +   FP V 
Sbjct: 1165 MRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVN 1224

Query: 415  MFNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TL---FLRLSQGGNR------- 457
            ++N LI GLCK   L  A N+L   +E    P      TL   F+R    G+        
Sbjct: 1225 IYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 1284

Query: 458  -----VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                   D  S   M++ YC  G++ +A   +  + + G +PD  TY ++I+G+ K GN+
Sbjct: 1285 EHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1344

Query: 513  NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            NGAL+   ++  +  +P+ VTY +LING  +    + A  +F  M     +P+   Y  L
Sbjct: 1345 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 1404

Query: 573  MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-------------QKGEVENA 619
            +    ++ K   A   +   L +    +D ++  +   L                EV   
Sbjct: 1405 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 1464

Query: 620  IQGLL---EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
               L+   ++ F + D + + Y   +  LC+   ++EAL+  + + +   +  P + + L
Sbjct: 1465 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 1524

Query: 677  IHGLCKRG 684
            ++G C  G
Sbjct: 1525 LYGFCSVG 1532



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 216/480 (45%), Gaps = 37/480 (7%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            LI+   K GD EK    F +M++    P+V IYN+V++     +    A+ +  +M    
Sbjct: 1054 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG 1113

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            C P+I+TF+ LI GL   G    A   L E  +R + PN+ +YT +I G C       A 
Sbjct: 1114 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1173

Query: 224  RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             L ++M   G +PD V + AL++G     +V EAL +     +    P +  Y+ LI GL
Sbjct: 1174 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233

Query: 284  FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             + +    A     +M E+ ++PD  +Y  +I G   +  + DA K+   M  +G+ PD 
Sbjct: 1234 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1293

Query: 344  YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
               NA+IKG+C  G++ +A      + K   +P+  T+T +I G  + G ++ A +    
Sbjct: 1294 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1353

Query: 404  MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-------IGKNPTLFLRLSQGGN 456
            M K  C P+V  +++LI+G CK G+ + A  LF  M+       +     L   L +   
Sbjct: 1354 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1413

Query: 457  RVHDKASLQTMVEQYCTA----------GL-----------------IHKAYKILM---Q 486
             +      +TM+  +C+           GL                 +H    +L+   +
Sbjct: 1414 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1473

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            L      P    YN++I   C+   +  AL     +  KG  P+ +T+ +L+ G   V +
Sbjct: 1474 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 225/559 (40%), Gaps = 55/559 (9%)

Query: 166  PNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P       L+   + +G    A +M + +  Q G LP       ++  L +  R D+A +
Sbjct: 905  PTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 964

Query: 225  LFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            L+ +M  KDSG   D  +   L+ G C  RRV+E L L+ +    G +P +  Y+ LIDG
Sbjct: 965  LYDEMLGKDSGA--DNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDG 1022

Query: 283  LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              R            +M      P +V YG +I  L + G ++    L  +MR+RG  P+
Sbjct: 1023 YCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPN 1082

Query: 343  TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               YN++I   C+     QA  +  +++     P+  TF  LI G+C  G V  A+    
Sbjct: 1083 VQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1142

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +  +    P+   +  LI G C  GEL  A+ L  +M              G     D  
Sbjct: 1143 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM-------------MGRGHTPDVV 1189

Query: 463  SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            +   ++     AG + +A  +  ++ E    PD+  YN LI+G CK   +  A  + +E+
Sbjct: 1190 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1249

Query: 523  QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              K ++PD   Y TLI+G  R +   DA +IF  M   G  P      +++   C+    
Sbjct: 1250 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMM 1309

Query: 583  SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            S A  L +  +R +    DE                                   YT  +
Sbjct: 1310 SEAI-LCMSNMRKVGCIPDEFT---------------------------------YTTVI 1335

Query: 643  IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             G  + G +  AL     +++ K      +   LI+G CK G  D A  +F         
Sbjct: 1336 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA-- 1393

Query: 703  LRPRVCNY-LLRSLLFSKD 720
            L P V  Y +L   LF KD
Sbjct: 1394 LSPNVVTYTILIGSLFKKD 1412



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 190/427 (44%), Gaps = 3/427 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F  LI+G    G   KA     +    +  P+   Y  +++    +   ++A  +  EM
Sbjct: 1120 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1179

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     P++VTF  LI+GL  +GK   A+ + ++MT+R + P+   Y ++ISGLC+    
Sbjct: 1180 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRML 1239

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
              A  +  +M +    PD   Y  L++GF +   + +A  +    E  G  P + S + +
Sbjct: 1240 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAM 1299

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I G  +     EA      M +    PD   Y  +I G ++ G +  A++ L DM +R  
Sbjct: 1300 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 1359

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P+   Y++LI G+C  G  D A  L   +      PN  T+TILI  + +   V  A  
Sbjct: 1360 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 1419

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             F  M    C P+    + L++GL         ++     E+     L +   +    + 
Sbjct: 1420 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 1479

Query: 460  D--KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG-NINGAL 516
            D   ++   ++   C   ++ +A     ++A+ G +P+ IT+ SL+ GFC VG ++N   
Sbjct: 1480 DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRT 1539

Query: 517  KLFKELQ 523
             L  E Q
Sbjct: 1540 ILPNEFQ 1546



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 218/486 (44%), Gaps = 21/486 (4%)

Query: 229  MKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  +G +P      AL+  +     + +A  +  R  E+ G +P +   + L+  L   +
Sbjct: 898  MSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQR 957

Query: 288  RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            R+D+A   Y +M  +    D     V++RGL    +V++ +KL+      G +P    YN
Sbjct: 958  RWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYN 1017

Query: 348  ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             LI G+C  G + +   L  E+     LP   T+  LI  + + G ++    LF +M K 
Sbjct: 1018 VLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1077

Query: 408  GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P+V ++N++ID LC      +A ++  +M   G +P              D  +  T
Sbjct: 1078 GFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDP--------------DIITFNT 1123

Query: 467  MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
            ++   C  G + KA   L +       P+ ++Y  LI+GFC  G +  A  L  E+  +G
Sbjct: 1124 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1183

Query: 527  LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
              PD VT+G LI+GL    +  +A  +  +M +    P   +Y  L++  C++R    A 
Sbjct: 1184 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAK 1243

Query: 587  SLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
            ++ L+ + + + + DE + +  I+ F++   + +A +    M+ K     +      + G
Sbjct: 1244 NI-LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKG 1302

Query: 645  LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
             CQ G + EA+   S + +   I    +   +I G  K+G L+ A+      +K     +
Sbjct: 1303 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK--CK 1360

Query: 705  PRVCNY 710
            P V  Y
Sbjct: 1361 PNVVTY 1366


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 232/456 (50%), Gaps = 17/456 (3%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           Y A ++   +  L   AL  + EM K NC    + ++  I  L +  + ++A +  D M 
Sbjct: 12  YRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMI 71

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            +G   N FTY+  ISGLC++       +L   M   G  PD  AYN  LN  C   ++D
Sbjct: 72  PQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLD 131

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            AL ++++  + G  P + +Y+ +I+GL RA R+D A   +R M  +   PD      ++
Sbjct: 132 VALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALV 191

Query: 316 RGLSEAGKVKDAMKL-LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
            GL   GKV  A +L +  MR R I      YN+LI GFC  G +D+A+S+   + +   
Sbjct: 192 LGLCHDGKVDLAYELTVGAMRGR-IKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGC 250

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P+  T+ +L+   C   ++++A+ L  KME++G  P V  +N L+ GLCKA  L+KA +
Sbjct: 251 EPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYM 310

Query: 435 LFY-KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +   KME           ++G   + D  S  T+++  CTA    +AYK+  ++   G  
Sbjct: 311 MMVNKME-----------AKG---LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGIT 356

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++T+  LI  F + G+ N A KL  ++   GL PD V Y T+++ L +  +   A  +
Sbjct: 357 PDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSV 416

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           F  M ++G TP    Y +L+   CR  + S A  L+
Sbjct: 417 FCDMVESGITPDVVSYNALINGLCRASRVSEAMHLY 452



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 243/493 (49%), Gaps = 26/493 (5%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           IS Y K G  ++AL++F +M + +C+     YN  + +  R+  F LA   Y  M+    
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
             N  T+S  I+GL K     +  K+L++M + G +P+ + Y I ++ LC  N+ D A  
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +   M + G  PD V Y  ++NG C+  R D A+ + R+  + GF P   +   L+ GL 
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLC 195

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
              + D AY         +I+    +Y  +I G  +AG +  A  ++S MR  G  PD  
Sbjct: 196 HDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLV 255

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA-QKLFNK 403
            YN L+   CD  LL++A +L  ++ +    P+ +++  L+ G+C+   +D A   + NK
Sbjct: 256 TYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNK 315

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT-----------LFLR-- 450
           ME  G    V  +N +I  LC A   ++A  LF +M  GK  T            FLR  
Sbjct: 316 MEAKG-LCDVVSYNTIIKALCTASHTKRAYKLFEEMG-GKGITPDVVTFTILIKAFLREG 373

Query: 451 --------LSQ--GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                   L Q  G   + D+    T+V+  C  G +  A+ +   + ESG  PD+++YN
Sbjct: 374 SSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYN 433

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           +LING C+   ++ A+ L++++   G  PD VT+  +I GL    +   A R++ QM + 
Sbjct: 434 ALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEK 493

Query: 561 GCTPSPAVYKSLM 573
           G T   AV ++L+
Sbjct: 494 GFTLDGAVSETLV 506



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 231/481 (48%), Gaps = 23/481 (4%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD---CEKALESFGKMKE 126
           I +L++ + FDL  Q  D +     S+ S  +   ISG  KV +    EK LE    M  
Sbjct: 51  IGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED---MDR 107

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD++ YN  LN+   +    +AL V   MV+    P+IVT++++INGL ++G+ + 
Sbjct: 108 LGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDS 167

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++   M ++G  P++     ++ GLC   + D AY L +             YN+L+N
Sbjct: 168 AVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLIN 227

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC+   +D+A +++    ++G  P L +Y+ L++        +EA    +KM    +EP
Sbjct: 228 GFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEP 287

Query: 307 DVVLYGVMIRGLSEAGKVKDA-MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           DV  Y  +++GL +A ++  A M +++ M  +G+  D   YN +IK  C      +A  L
Sbjct: 288 DVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC-DVVSYNTIIKALCTASHTKRAYKL 346

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+  +   P+  TFTILI    R G  + A+KL ++M   G  P   ++  ++D LCK
Sbjct: 347 FEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCK 406

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G++  A+ +F  M E G  P              D  S   ++   C A  + +A  + 
Sbjct: 407 TGKMGMAHSVFCDMVESGITP--------------DVVSYNALINGLCRASRVSEAMHLY 452

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             +   G  PD +T+  +I G      ++ A +++ ++  KG   D     TL+N +   
Sbjct: 453 EDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSN 512

Query: 545 D 545
           D
Sbjct: 513 D 513



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 211/468 (45%), Gaps = 38/468 (8%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           +AY A ++ + K   +D+AL       K         Y+  I  L R  R+D A  +Y +
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  +    +   Y   I GL +        KLL DM   G VPD + YN  +   C    
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           LD A  +   + ++   P+  T+TI+I G+CR G  D A +++  M + G  P      A
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           L+ GLC  G+++    L Y++ +G         +  G     K+   +++  +C AG I 
Sbjct: 190 LVLGLCHDGKVD----LAYELTVG---------AMRGRIKFSKSIYNSLINGFCQAGWID 236

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           KA  I+  +  +G  PD++TYN L+N  C    +  A  L K+++  G+ PD  +Y  L+
Sbjct: 237 KAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELL 296

Query: 539 NGLQRVDREEDAFRIF-GQMPQNG---CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
            GL + +R + A+ +   +M   G         + K+L T S  +R + L          
Sbjct: 297 KGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKL--------FE 348

Query: 595 DISGR----DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGL 645
           ++ G+    D  +    I+ FL++G   N  + LL+   ++    L P    YT  +  L
Sbjct: 349 EMGGKGITPDVVTFTILIKAFLREGS-SNIAKKLLD---QMTGLGLLPDRVLYTTIVDHL 404

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           C+ G++  A ++F  +VE        S   LI+GLC+   +  AM ++
Sbjct: 405 CKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLY 452



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 6/306 (1%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L      DL ++       G +     ++  LI+G+ + G  +KA      M+  
Sbjct: 189 ALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRN 248

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
            C+PD+  YN +LN    + L   A  +  +M +    P++ +++ L+ GL K+ + + A
Sbjct: 249 GCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKA 308

Query: 188 -IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            + M+++M  +G L +  +Y  +I  LC  +    AY+LF +M   G +PD V +  L+ 
Sbjct: 309 YMMMVNKMEAKG-LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIK 367

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            F +    + A  LL      G +P    Y+ ++D L +  +   A++ +  M E  I P
Sbjct: 368 AFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITP 427

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV Y  +I GL  A +V +AM L  DM   G  PD   +  +I G     + ++  S+ 
Sbjct: 428 DVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGL----IWEKKLSVA 483

Query: 367 VEIWKR 372
             +W +
Sbjct: 484 CRVWDQ 489



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/362 (24%), Positives = 148/362 (40%), Gaps = 26/362 (7%)

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPT 446
           + G++D A K F++M K+ C      +N  I  L +    + A   + +M       N  
Sbjct: 21  KAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSF 80

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            + R   G  +V +   ++                K+L  +   G +PDI  YN  +N  
Sbjct: 81  TYSRFISGLCKVKNFVLIE----------------KLLEDMDRLGYVPDIWAYNIYLNLL 124

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C    ++ AL + + +  KG  PD VTY  +INGL R  R + A  I+  M + G +P  
Sbjct: 125 CCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDE 184

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLE 625
              ++L+   C   K  LA+ L +  +R           S I  F Q G ++ A   +  
Sbjct: 185 KACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISF 244

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHGLCKR 683
           M     +  L  Y + L+  C D  + E        +E ++ V P   S  +L+ GLCK 
Sbjct: 245 MRRNGCEPDLVTYNV-LLNYCCDELLLEEAENLMKKME-RSGVEPDVYSYNELLKGLCKA 302

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDAC 743
             LD A  + +  ++   +      N ++++L  +   K+  AY L   M   G   D  
Sbjct: 303 NRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKR--AYKLFEEMGGKGITPDVV 360

Query: 744 LY 745
            +
Sbjct: 361 TF 362



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 89/191 (46%)

Query: 58  KRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           K L    S + +I  L   +     ++  +E+    ++     F +LI  + + G    A
Sbjct: 319 KGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIA 378

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            +   +M      PD  +Y  +++   +     +A +V+ +MV+    P++V+++ LING
Sbjct: 379 KKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALING 438

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++ +   A+ + ++M   G  P++ T+ ++I GL    +   A R++ +M + G + D
Sbjct: 439 LCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLD 498

Query: 238 FVAYNALLNGF 248
                 L+N  
Sbjct: 499 GAVSETLVNAI 509



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 9/221 (4%)

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           + Y + I+ + K G I+ ALK F E+     R  S+ Y   I  L R  R + A + + +
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-----LQYLRDISGRDDESMKSIEEFL 611
           M   G + +   Y   ++  C+ + F L   L      L Y+ DI   +      +    
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYN----IYLNLLC 125

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
            + +++ A+  +  M  K  +  +  YTI + GLC+ G+   A+ I+  +V         
Sbjct: 126 CENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEK 185

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           +C  L+ GLC  G +DLA ++ +  ++        + N L+
Sbjct: 186 ACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLI 226



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 5/243 (2%)

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + + +  +  Y  AGLI +A K   ++ +S      I YN  I    +    + A + + 
Sbjct: 9   RLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYD 68

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +  +G   +S TY   I+GL +V       ++   M + G  P    Y   +   C   
Sbjct: 69  RMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCEN 128

Query: 581 KFSLAFSLWLQYLRDISGRDDESMK---SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +  +A  + +Q + +  GR+ + +     I    + G  ++A++    M  K        
Sbjct: 129 QLDVALGV-VQTMVE-KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKA 186

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
               ++GLC DG+V  A  +    +  +   +      LI+G C+ G++D A  +  +  
Sbjct: 187 CRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMR 246

Query: 698 KNG 700
           +NG
Sbjct: 247 RNG 249


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 185/710 (26%), Positives = 320/710 (45%), Gaps = 61/710 (8%)

Query: 110 KVGDCEKALESFGKMK-EF-DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           ++G  + A+  F  ++ +F    P + +YN +L    R         +Y +M+     P 
Sbjct: 90  QLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQ 149

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             TF+LLI+ L +S   + A+++ ++M Q+G  PN+FT  I++ GLC+     +A  L +
Sbjct: 150 TYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL-V 208

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
              +S    + V YN L++ FC+    +EA  L+    + G +P + +++  I  L RA 
Sbjct: 209 NNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAG 268

Query: 288 RYDEAYAWYRKMFEEK----IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           +  EA   +R M  +       P+VV + +M++G  + G + DA  L+  M++ G     
Sbjct: 269 KVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSL 328

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
            CYN  + G    G L +AR +  E+  +   PN +T+ I++ G+CRN M+ DA+ L + 
Sbjct: 329 ECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDL 388

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGN 456
           M + G +P    ++ L+ G C  G++ +A  + ++M   G  P      TL   L + G 
Sbjct: 389 MMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGR 448

Query: 457 RVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGN--------- 492
            +  +  LQ M E+                C  G + KA +I+ ++  +G          
Sbjct: 449 TLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSF 508

Query: 493 -------------LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
                        LPD ITY +LING CKVG +  A K F E+  K LRPDSVTY T I 
Sbjct: 509 ASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIW 568

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
              +  +   AFR+   M +NGC+ +   Y +L+       +    + L  +        
Sbjct: 569 SFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISP 628

Query: 600 DDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           D  +  +I   L + G+ ++AI  L EM  K     ++ + I +    +    K A  +F
Sbjct: 629 DICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF 688

Query: 659 SVLVE-CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL- 716
            V +  C       S   + + L   G L  A ++F  +L     L+    N++ + L+ 
Sbjct: 689 EVALNICGRKEALYSL--MFNELLAGGQLSEAKELFEVSLDRYLTLK----NFMYKDLIA 742

Query: 717 -FSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
              +D +   A  LL ++   GY  D   +      L    N R+ + ++
Sbjct: 743 RLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELA 792



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 182/397 (45%), Gaps = 58/397 (14%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY   G   +A     +M    CQP+ Y  N +L+  +++   L A  +  +M
Sbjct: 400 AYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKM 459

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG--------------------- 198
            +    P+ VT ++++NGL ++G+ + A +++ EM   G                     
Sbjct: 460 NEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVS 519

Query: 199 -ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
             LP+  TYT +I+GLC++ R +EA + F++M      PD V Y+  +  FCK  ++  A
Sbjct: 520 NCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSA 579

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             +L+  E++G    L +Y+ LI GL    +  E Y    +M E+ I PD+  Y  +I  
Sbjct: 580 FRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITC 639

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF---------CDL------------ 356
           L E GK KDA+ LL +M ++GI P+   +  LIK F         C+L            
Sbjct: 640 LCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKE 699

Query: 357 -------------GLLDQARSL-QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
                        G L +A+ L +V + +  +L N   +  LI  +C++  + DA  L  
Sbjct: 700 ALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKN-FMYKDLIARLCQDERLADANSLLY 758

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           K+   G       F  +IDGL K G   +A+ L  +M
Sbjct: 759 KLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 189/683 (27%), Positives = 315/683 (46%), Gaps = 54/683 (7%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V  DVF   VLI    KVG    A+     ++      D   YN V++      L   A 
Sbjct: 125 VSPDVFALNVLIHSLCKVGQLSFAI---SLLRNRVISVDTVTYNTVISGLCEHGLADEAY 181

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EMVK+  LP+ V+F+ LI+G  K G    A  ++DE+++     N  T+TI+IS  
Sbjct: 182 QFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISEL----NLITHTILISSY 237

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             ++  +EAYR    M  SG  PD V +++++N  CK  +V E   LLR  E+ G  P  
Sbjct: 238 YNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNH 294

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+D LF+AK Y  A A Y +M    I  D+V+Y V++ GL +AG +++A K    
Sbjct: 295 VTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKM 354

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + E   VP+   Y AL+ G C  G L  A  +  ++ ++   PN  T++ +I G  + GM
Sbjct: 355 LLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGM 414

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLR 450
           +++A  L  KME     P+   +  +IDGL KAG+ E A+ +  +M    + +N  +   
Sbjct: 415 LEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDA 474

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAG--LIHKAYKILMQLAESG----------------N 492
           L     R+     ++ +V+   + G  L H  Y  L+ +   G                 
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKE 534

Query: 493 LP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
           +P D+++YN LI+G  K G + GA   +K ++ KG+ PD  T+  ++N  ++    E   
Sbjct: 535 MPWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGIL 593

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           +++ +M   G  PS  +   ++   C + K   A  +  Q +      +  + +   +  
Sbjct: 594 KLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMS 653

Query: 612 QKGEVENAI----QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            K +  +AI    + LL    KL+      Y   +  LC+ G  ++A  +   + E +  
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSR---QVYNTLIATLCKLGMTRKAAMVMEDM-EARGF 709

Query: 668 VTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNK 722
           V  P  V    L+HG     ++  A+  +   ++ G  + P V  Y  ++R L  +   K
Sbjct: 710 V--PDTVTFNALMHGYFVGSHVGKALSTYSMMMEAG--ISPNVATYNTIIRGLSDAGLIK 765

Query: 723 KVHAYHLLCRMKSVGYDLDACLY 745
           +V  +  L  MKS G   D   Y
Sbjct: 766 EVEKW--LSEMKSRGMRPDDFTY 786



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 232/510 (45%), Gaps = 49/510 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+ VL++G +K GD  +A ++F  + E +  P+V  Y A+++   +      A  +  +M
Sbjct: 331 VYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ +  PN+VT+S +ING  K G  E A+ ++ +M  + ++PN FTY  VI GL +  + 
Sbjct: 391 LEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQ 450

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  +  +M+  G   +    +AL+N   ++ R+ E   L++     G      +Y+ L
Sbjct: 451 EVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSL 510

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID  F+    + A +W  +M E+++  DVV Y V+I GL + GKV  A      MRE+GI
Sbjct: 511 IDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGI 569

Query: 340 VPDTYCYNALIKG-----------------------------------FCDLGLLDQARS 364
            PD   +N ++                                      C+ G + +A  
Sbjct: 570 EPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAID 629

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  ++   +  PN  T+ I +    ++   D   K    +   G   S  ++N LI  LC
Sbjct: 630 ILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K G   KA ++   ME                 V D  +   ++  Y     + KA    
Sbjct: 690 KLGMTRKAAMVMEDME-------------ARGFVPDTVTFNALMHGYFVGSHVGKALSTY 736

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             + E+G  P++ TYN++I G    G I    K   E++ +G+RPD  TY  LI+G  ++
Sbjct: 737 SMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKI 796

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
             ++++  I+ +M  +G  P  + Y  L++
Sbjct: 797 GNKKESMTIYCEMIADGLVPKTSTYNVLIS 826



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 1/325 (0%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + VLISG  K G    A  ++  M+E   +PD+  +N ++N   ++  F   L ++ +M 
Sbjct: 542 YNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMK 600

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+++  ++++  L + GK + AI +LD+M    I PN  TY I +    +  RAD
Sbjct: 601 SCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRAD 660

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
             ++    +   G       YN L+   CKL    +A  ++   E  GFVP   +++ L+
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALM 720

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            G F      +A + Y  M E  I P+V  Y  +IRGLS+AG +K+  K LS+M+ RG+ 
Sbjct: 721 HGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMR 780

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD + YNALI G   +G   ++ ++  E+     +P T T+ +LI    + G +  A +L
Sbjct: 781 PDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATEL 840

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCK 425
             +M K    P+   +  +I GLCK
Sbjct: 841 MKEMGKRRVSPNTSTYCTMISGLCK 865



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 230/501 (45%), Gaps = 48/501 (9%)

Query: 182 GKTEVAIKMLDEMTQRGILP-----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G+   A + L  M   G++P     N   +   ++GL      D+   ++ KM   G SP
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVH----DQVSLVYSKMIACGVSP 127

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRS--FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           D  A N L++  CK+ ++  A++LLR+     D       +Y+ +I GL      DEAY 
Sbjct: 128 DVFALNVLIHSLCKVGQLSFAISLLRNRVISVDTV-----TYNTVISGLCEHGLADEAYQ 182

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +  +M +  I PD V +  +I G  + G    A  L+ ++ E  ++  T     LI  + 
Sbjct: 183 FLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHT----ILISSYY 238

Query: 355 DLGLLDQA-RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           +L  +++A R + +  +     P+  TF+ +I  +C++G V +   L  +ME+ G +P+ 
Sbjct: 239 NLHAIEEAYRDMVMSGFD----PDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNH 294

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNP-------TLFLRLSQGG----------- 455
             +  L+D L KA +   A  L+ +M +   P        L   L + G           
Sbjct: 295 VTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKM 354

Query: 456 ----NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N V +  +   +V+  C AG +  A  I+ Q+ E    P+++TY+S+ING+ K G 
Sbjct: 355 LLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGM 414

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A+ L ++++ + + P+  TYGT+I+GL +  ++E A  +  +M   G   +  +  +
Sbjct: 415 LEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDA 474

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKL 630
           L+    R  +      L    +      D  +  S I+ F + G+ E A+    EM  K 
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKE 534

Query: 631 NDFQLAPYTIWLIGLCQDGQV 651
             + +  Y + + GL + G+V
Sbjct: 535 MPWDVVSYNVLISGLLKFGKV 555



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 1/365 (0%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT 85
           L  ++ T++  V  K  + +    +     +++      S + +IS LLK       W  
Sbjct: 502 LDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADW-A 560

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
              +R   +      F ++++   K GD E  L+ + KMK    +P + I N V+ +   
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCE 620

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K     A+ +  +M+ +   PN+ T+ + ++  SK  + +   K  + +   GI  ++  
Sbjct: 621 KGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQV 680

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I+ LC++    +A  +   M+  G  PD V +NAL++G+     V +AL+      
Sbjct: 681 YNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMM 740

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + +Y+ +I GL  A    E   W  +M    + PD   Y  +I G ++ G  K
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKK 800

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           ++M +  +M   G+VP T  YN LI  F  +G + QA  L  E+ KR   PNT T+  +I
Sbjct: 801 ESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMI 860

Query: 386 CGMCR 390
            G+C+
Sbjct: 861 SGLCK 865



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 153/357 (42%), Gaps = 15/357 (4%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN--I 142
           TLD +   N + + DVFF       K GD E AL    +M+E +   DV  YN +++  +
Sbjct: 501 TLDHI---NYTSLIDVFF-------KGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLL 550

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F K   + A   Y  M +    P+I TF++++N   K G  E  +K+ D+M   GI P+
Sbjct: 551 KFGK---VGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPS 607

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
                IV+  LC+  +  EA  +  +M      P+   Y   L+   K +R D       
Sbjct: 608 LMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHE 667

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           +    G       Y+ LI  L +     +A      M      PD V +  ++ G     
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGS 727

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            V  A+   S M E GI P+   YN +I+G  D GL+ +      E+  R   P+  T+ 
Sbjct: 728 HVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYN 787

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            LI G  + G   ++  ++ +M   G  P    +N LI    K G++ +A  L  +M
Sbjct: 788 ALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEM 844



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 167/422 (39%), Gaps = 93/422 (22%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF-------------- 353
           V L+  + R     G++  A + LS M   G+VPD   +N+LI  F              
Sbjct: 58  VSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVY 117

Query: 354 ----------------------CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                                 C +G L  A SL   +  R    +T T+  +I G+C +
Sbjct: 118 SKMIACGVSPDVFALNVLIHSLCKVGQLSFAISL---LRNRVISVDTVTYNTVISGLCEH 174

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G+ D+A +  ++M K G  P    FN LIDG CK G   +A              L   +
Sbjct: 175 GLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAK------------ALVDEI 222

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+     H       ++  Y     I +AY+    +  SG  PD++T++S+IN  CK G 
Sbjct: 223 SELNLITH-----TILISSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKDGK 274

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +     L +E++  G+ P+ VTY TL++ L +      A  ++ QM   G      VY  
Sbjct: 275 VMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTV 334

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           LM    +                  +G   E+ K+ +  L+  EV N +           
Sbjct: 335 LMAGLFK------------------AGDLREAEKTFKMLLEDNEVPNVV----------- 365

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + GLC+ G +  A  I + ++E        +   +I+G  K+G L+ A+ 
Sbjct: 366 -----TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVS 420

Query: 692 VF 693
           + 
Sbjct: 421 LM 422


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 241/483 (49%), Gaps = 15/483 (3%)

Query: 111 VGDCEKALESFGKMKEFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + + + A+ SF  +   +   P ++ +N +L+   +   F +A++   +M      P + 
Sbjct: 30  IDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMF 89

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           TF++LIN  S   +   A  M+ ++ + G  P+  T   ++ GLC   +  EA      +
Sbjct: 90  TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKR 288
                  D V+Y  L+NG CK      AL LLR  E    V P +  Y+ +ID   + K 
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             +AY  Y +M  +KI P+VV +  +I G    G++K+A+ LL++M    + P+ Y +N 
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G C  G + +A S+   + K+   PN  T+T L+ G      V+ A+ +FN +   G
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P+V  ++ +I+GLCK   +++A  LF +M +              N   +  +  +++
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHL-------------KNMTPNTVTYSSLI 376

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           +  C +G I   + ++ ++   G   +IITYNSL+NG CK   ++ A+ L  +++ +G++
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD  TY TL++GL +  R +DA RI+  +   G   +  +Y  ++   C+   F  A SL
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSL 496

Query: 589 WLQ 591
             Q
Sbjct: 497 LSQ 499



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 253/509 (49%), Gaps = 17/509 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  ++S   K+   + A+    +M+    QP+++ +N ++N          A ++  +++
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL   P+ VT + L+ GL  +GK + A+   D + ++    ++ +Y  +I+GLC+     
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175

Query: 221 EAYRLFLKMKDSG-CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            A +L  K++      PD + Y A+++ FCK + V +A  L          P + +++ L
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G     +  EA     +M    + P+V  + ++I GL + G+VK A  +LS M ++G+
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV 295

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y +L+ G+  +  +++A+ +   I  R   PN H+++++I G+C+N MVD+A K
Sbjct: 296 EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVK 355

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LF +M      P+   +++LIDGLCK+G +     L  ++     P   +          
Sbjct: 356 LFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANII---------- 405

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +  +++   C    + KA  +L ++ + G  PD+ TY +L++G CK G +  A +++
Sbjct: 406 ---TYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++L  KG   +   Y  +INGL +    ++A  +  QM  NGC P    Y++L++   + 
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522

Query: 580 RKFSLAFSLWLQYL---RDISGRDDESMK 605
            K   A  L  + +    D SG++    K
Sbjct: 523 NKNGKAVKLLREMIARESDCSGKEQSREK 551



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 246/495 (49%), Gaps = 20/495 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++S L+K N F +      ++    +      F +LI+ +  +     A     K+ +
Sbjct: 57  NKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILK 116

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              QPD    N +L           AL  +  +++     + V++  LINGL KSG+T  
Sbjct: 117 LGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRA 176

Query: 187 AIKMLDEMTQRGIL---PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           A+++L ++   G+L   P+   YT +I   C+     +AY L+ +M      P+ V +N+
Sbjct: 177 ALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNS 234

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L+ GFC + ++ EA+ LL     +   P + +++ LIDGL +     +A +    M ++ 
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           +EP+VV Y  ++ G     +V  A  + + +  RG+ P+ + Y+ +I G C   ++D+A 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  E+  ++  PNT T++ LI G+C++G + D   L +++   G   ++  +N+L++GL
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK  +++KA  L  KM + G  P              D ++  T+V+  C  G +  A +
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQP--------------DMSTYTTLVDGLCKNGRLKDAQR 460

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           I   L   G   +I  Y  +ING CK G  + AL L  +++  G  PD+VTY TLI+ L 
Sbjct: 461 IYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALF 520

Query: 543 RVDREEDAFRIFGQM 557
           + ++   A ++  +M
Sbjct: 521 KNNKNGKAVKLLREM 535



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 269/573 (46%), Gaps = 67/573 (11%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P  F +  ++S L ++N    A     +M+  G  P+   +N L+N F  L +++ A ++
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +    K G+ P   + + L+ GL    +  EA  ++  +  ++   D V YG +I GL +
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 321 AGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +G+ + A++LL  +    +V PD   Y A+I  FC   L+  A  L  E+  +   PN  
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYK 438
           TF  LI G C  G + +A  L N+M      P+V  FN LIDGLCK GE++KA ++L   
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           ++ G  P +               +  ++++ Y     ++KA  +   ++  G  P++ +
Sbjct: 291 IKQGVEPNV--------------VTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHS 336

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+ +ING CK   ++ A+KLFKE+ LK + P++VTY +LI+GL +  R  D + +  ++ 
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G   +   Y SL+   C+  +   A +L       ++   DE ++             
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKAIAL-------LTKMKDEGIQP------------ 437

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--- 675
                           ++ YT  + GLC++G++K+A  I+  L+ CK     P  ++   
Sbjct: 438 ---------------DMSTYTTLVDGLCKNGRLKDAQRIYQDLL-CKGY---PLNIRMYT 478

Query: 676 -LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY-LLRSLLFSKDNKKVHAYHLLCRM 733
            +I+GLCK G+ D A+ +      NG +  P    Y  L S LF K+NK   A  LL  M
Sbjct: 479 VMINGLCKEGFFDEALSLLSQMEDNGCM--PDAVTYETLISALF-KNNKNGKAVKLLREM 535

Query: 734 KSVGYDLDACLYPKTK-----SLLPGPWNTREM 761
            +   D       + K     S  PG ++  E+
Sbjct: 536 IARESDCSGKEQSREKKDKDTSSYPGSFHNTEV 568



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 152/289 (52%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E+   NV+     F +LI G  K G+ +KA      M +   +P+V  Y ++++  F 
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A  V+  +      PN+ ++S++INGL K+   + A+K+  EM  + + PN  T
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y+ +I GLC+  R  + + L  ++ + G   + + YN+LLNG CK  +VD+A+ALL   +
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMK 431

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            +G  P + +Y+ L+DGL +  R  +A   Y+ +  +    ++ +Y VMI GL + G   
Sbjct: 432 DEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFD 491

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +A+ LLS M + G +PD   Y  LI          +A  L  E+  R+S
Sbjct: 492 EALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARES 540



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 125/276 (45%), Gaps = 22/276 (7%)

Query: 394 VDDAQKLFNK-MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRL 451
           +DDA   FN  +      P +  FN ++  L K    + A     +ME+ G  P +F   
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMF--- 89

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                      +   ++  +     ++ A+ ++ ++ + G  PD +T N+L+ G C  G 
Sbjct: 90  -----------TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGK 138

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG---CTPSPAV 568
           +  AL     +  K    D V+YGTLINGL +      A ++  ++   G     P   +
Sbjct: 139 VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE--GLLLVRPDVIM 196

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           Y +++   C+ +    A+ L+ + +      +  +  S I  F   G+++ A+  L EM 
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
               +  +  + I + GLC++G+VK+A ++ SV+++
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIK 292



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 23/202 (11%)

Query: 544 VDREEDAFRIFGQ-MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +D  +DA   F   +  N  TP    +  +++   +   F +A S   Q           
Sbjct: 30  IDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQM---------- 79

Query: 603 SMKSIE-EFLQKGEVENAIQGLLEMDF------KLNDFQLAPYTI----WLIGLCQDGQV 651
            +K I+ E      + N    L +++F      K+      P T+     L GLC +G+V
Sbjct: 80  ELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKV 139

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           KEALN    ++  +  +   S   LI+GLCK G    A+ + L  ++   ++RP V  Y 
Sbjct: 140 KEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQL-LRKIEGLLLVRPDVIMYT 198

Query: 712 LRSLLFSKDNKKVHAYHLLCRM 733
                F KD   + AY L   M
Sbjct: 199 AIIDSFCKDKLVIDAYDLYSEM 220


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 215/441 (48%), Gaps = 18/441 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+  Y+  G    A++ F  ++  + Q   +    +L+        +     Y E+
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEI 214

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P +  +++LIN   K G    A  + +E+ +RG+ P   ++  +I+GLC+    
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DE +RL   M+++   PD   Y+ L++G CK  R+D A  L    ++ G  P   +++ L
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG +R++R D A   Y +M    ++PD+V+Y  ++ GL + G V  A KL+ +M+  G+
Sbjct: 335 IDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGM 394

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y  LI G+C  G L+ A  ++  + +   + +   FT LI G CR+G V DA++
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
              +M +AG  P    +  +IDG CK G ++    L  +M+I G  P +           
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI---------- 504

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++   C  G +  A  +L  +   G  PD ITYN L+ G CK G     LKL
Sbjct: 505 ----TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560

Query: 519 FKELQLKGLRPDSVTYGTLIN 539
             E   KGL  D   Y +L++
Sbjct: 561 RNE---KGLIVDYAYYTSLVS 578



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 184/359 (51%), Gaps = 13/359 (3%)

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +  + ++ + G  P    YN L+N FCK   + +A  +     K G  P   S++ LI+G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +++  DE +   + M E +I PDV  Y V+I GL + G++  A +L  +M++RG+ P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              + ALI G      +D A +   ++      P+   +  L+ G+C+ G V+ A+KL +
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M+  G  P    +  LIDG CK G+LE A      MEI K       +++ G  V D  
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESA------MEIRKG------MNEEG-VVLDNV 434

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++  +C  G +  A + L ++ E+G  PD  TY  +I+G+CK GN+    KL KE+
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           Q+ G +P  +TY  L+NGL +  + ++A  +   M   G TP    Y  L+   C+  K
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 221/448 (49%), Gaps = 31/448 (6%)

Query: 220 DEAYRLFLKMKDSG---CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           D A  +F  + D+    CS +FV ++AL+  +     V +A+   R      F       
Sbjct: 134 DSAASVFAAILDTAGTRCS-NFV-FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGC 191

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             L+D +  +      + +Y ++ E    P V  Y ++I    + G ++DA  + +++R+
Sbjct: 192 GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG+ P T  +N LI G C    LD+   L+  + +    P+  T+++LI G+C+ G +D 
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A++LF++M++ G  P+   F ALIDG  ++  ++ A   +++M  +G  P L +      
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM------ 365

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T++   C  G ++KA K++ ++   G  PD ITY +LI+G+CK G++  A
Sbjct: 366 --------YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +++ K +  +G+  D+V +  LI+G  R  R  DA R   +M + G  P  A Y  ++  
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENA---IQGLLEMDFK 629
            C++    + F L  +    I+G     +     +    ++G+++NA   ++ +L +   
Sbjct: 478 YCKKGNVKMGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +D     Y I L G C++G+ ++ L +
Sbjct: 536 PDDIT---YNILLEGHCKNGKAEDLLKL 560



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 161/318 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   +   +  F  LI+G  K  + ++       M+E    PDV+ Y+ +++   +
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +    +A  ++ EM +    PN +TF+ LI+G  +S + + A+    +M   G+ P+   
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 365

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++GLC++   ++A +L  +MK  G  PD + Y  L++G+CK   ++ A+ + +   
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++G V    +++ LI G  R  R  +A    R+M E  ++PD   Y ++I G  + G VK
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
              KLL +M+  G  P    YN L+ G C  G +  A  L   +      P+  T+ IL+
Sbjct: 486 MGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545

Query: 386 CGMCRNGMVDDAQKLFNK 403
            G C+NG  +D  KL N+
Sbjct: 546 EGHCKNGKAEDLLKLRNE 563



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 3/325 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  T+ + + K++N   GFR      + +      + S +I  L K    D+  Q  DE
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++   +      F  LI G Y+    + A+ ++ +M     +PD+ +YN +LN   +   
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +  EM  +   P+ +T++ LI+G  K G  E A+++   M + G++ +   +T 
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +ISG C+  R  +A R   +M ++G  PD   Y  +++G+CK   V     LL+  + +G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P + +Y+ L++GL +  +   A      M    + PD + Y +++ G  + GK +D +
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558

Query: 329 KLLSDMRERGIVPDTYCYNALIKGF 353
           KL +   E+G++ D   Y +L+  +
Sbjct: 559 KLRN---EKGLIVDYAYYTSLVSEY 580



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 201/441 (45%), Gaps = 40/441 (9%)

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           +S  GK   A    + +   G     + ++AL+  + D G +  A  +Q     R+S   
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDA--IQCFRLVRNS--- 182

Query: 378 THTFTILI--CGMCRNGMVDDAQKL-----FNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
              F I    CG   + M++    +     ++++ + G  P V  +N LI+  CK G + 
Sbjct: 183 --NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            A L+F ++ + G  PT                S  T++   C +  + + +++   + E
Sbjct: 241 DAKLIFNEIRKRGLRPT--------------TVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +   PD+ TY+ LI+G CK G ++ A +LF E+Q +GLRP+ +T+  LI+G  R  R + 
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
           A   + QM   G  P   +Y +L+   C+    + A  L +  ++ +  + D+   +  I
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL-VDEMKMVGMKPDKITYTTLI 405

Query: 608 EEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           + + ++G++E+A++   G+ E    L++     +T  + G C+DG+V++A      +VE 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDN---VAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
                  +   +I G CK+G + +   +      NG   +P V  Y +      K  +  
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH--KPGVITYNVLMNGLCKQGQMK 520

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
           +A  LL  M ++G   D   Y
Sbjct: 521 NANMLLEAMLNLGVTPDDITY 541


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 267/604 (44%), Gaps = 116/604 (19%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ------LFLLAL 153
           +F  L+  Y    D   A +   +M    C P   +YN  +     ++      L  LA 
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAE 238

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            +Y EM+  NC+ N V  +     L   GK + A +++ EM ++G +P+  TY+ VI+ L
Sbjct: 239 KIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFL 298

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---------------- 257
           C   + ++A+ LF +MK  G +PD   Y  L++ FCK   +++A                
Sbjct: 299 CHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV 358

Query: 258 ---LALLRSFEKDGFVPRLG----------------SYSCLIDGLFRAKRYDEAYAWYRK 298
               AL+ ++ K   VP+                  +Y  L+DGL +A    +A+  Y K
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 299 MF----------------EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           +                    + P+VV YG ++ GL +A KV  A +LL  M   G  P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ALI GFC  G +D A+ + +++ K   LP+ HT+T LI  M ++G +D A K+ +
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPT--------------- 446
           +M K  C P+V  + A+IDGLC+ GE EKA  LL    E G +P                
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 447 -------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA------------------Y 481
                  LF ++S+ G    +  + + ++   C AGL+ KA                  Y
Sbjct: 599 KIDLSLDLFTQMSRKGCS-PNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGY 657

Query: 482 K---------------ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL-- 524
           +               IL ++   G +P    Y  LI+ F K G +  A++L KE+    
Sbjct: 658 RCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVP 717

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
             ++ D+  Y +LI  L    + E+AFR++ +M + G  P  +V+  L+      +K+  
Sbjct: 718 SSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDE 777

Query: 585 AFSL 588
           A  L
Sbjct: 778 ALQL 781



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 238/508 (46%), Gaps = 33/508 (6%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           ++ S VI+ L      +  +    E++   V+     + +LI  + K G  E+A   F +
Sbjct: 289 STYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE 348

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M+   C P V  Y A+++   + +    A  +++ MV   C PN VT+  L++GL K+G 
Sbjct: 349 MRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGN 408

Query: 184 TEVAIKMLDEMT----------------QRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
              A ++  ++                 +  + PN  TY  ++ GLC+ ++ D A+ L  
Sbjct: 409 ISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  SGC P+ + Y+AL++GFCK  ++D A  +     K G++P + +Y+ LID +F+  
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R D A     +M ++   P+VV Y  MI GL   G+ + A+KLLS M E+G  P+   Y 
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           ALI G    G +D +  L  ++ ++   PN  T+ +LI  +C  G++D A+ L  +M++ 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
                +  +   I G  K+          +   +G      L   +    V        +
Sbjct: 649 YWPKYLQGYRCAIQGFSKS----------FIASLG-----ILEEMESYGTVPIAPVYGML 693

Query: 468 VEQYCTAGLIHKAYKILMQLAE--SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++ +  AG +  A ++  ++ E  S    D   Y SLI   C    +  A +L+ E+  +
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRI 553
           G  P+   +  LI GL  V + ++A ++
Sbjct: 754 GFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 253/551 (45%), Gaps = 51/551 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++  + M   +C+PN+VT+  L++G  K  +     ++++ M   G  PN   +  ++ 
Sbjct: 126 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVH 185

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C       AY+L  +M   GC P +V YN  +   C   ++     LL   EK     
Sbjct: 186 SYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSP-DLLDLAEK--IYG 242

Query: 272 RLGSYSCLIDGLFRAK---------RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
            + + +C+++ +  A          ++D+A+   ++M  +   PD   Y  +I  L  A 
Sbjct: 243 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 302

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           KV+ A  L  +M+  G+ PD Y Y  LI  FC  GL++QA+ L  E+      P   T+T
Sbjct: 303 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 362

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI    +   V  A  +F++M  AGC P+   + AL+DGLCKAG + KA  ++ K+ IG
Sbjct: 363 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL-IG 421

Query: 443 KNPT----LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
            + +     +           +  +   +V+  C A  +  A+++L  +  SG  P+ I 
Sbjct: 422 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 481

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y++LI+GFCK G I+ A ++F ++   G  P   TY +LI+ + +  R + A ++  QM 
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           ++ CTP+   Y +++   CR                                   GE E 
Sbjct: 542 KDSCTPNVVTYTAMIDGLCR----------------------------------IGESEK 567

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
           A++ L  M+ K     +  YT  + GL + G++  +L++F+ +          +   LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 679 GLCKRGYLDLA 689
            LC  G LD A
Sbjct: 628 HLCAAGLLDKA 638



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 168/692 (24%), Positives = 294/692 (42%), Gaps = 113/692 (16%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +ISG  +    ++A+    +M+   C P+V  Y  +L+   +K+       +   M+   
Sbjct: 113 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 172

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG----------- 212
           C PN   F+ L++          A K+L+ MT  G  P    Y I I             
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 213 ------------------------------LCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
                                         LC + + D+A++L  +M   G  PD   Y+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++   C   +V++A  L +  +  G  P + +Y+ LID   +A   ++A   + +M   
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P VV Y  +I    +A +V  A  +   M + G  P+   Y AL+ G C  G + +A
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 363 RSLQVE-IWKRDS---------------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             +  + I   DS                PN  T+  L+ G+C+   VD A +L + M  
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
           +GC P+  +++ALIDG CKAG+++ A  +F +M + G  P+           VH   SL 
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS-----------VHTYTSL- 520

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
             +++    G +  A K+L Q+ +    P+++TY ++I+G C++G    ALKL   ++ K
Sbjct: 521 --IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC-------- 577
           G  P+ VTY  LI+GL +  + + +  +F QM + GC+P+   Y+ L+   C        
Sbjct: 579 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKA 638

Query: 578 RRRKFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
           R     +  + W +YL+     I G     + S+              G+LE        
Sbjct: 639 RLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASL--------------GILEEMESYGTV 684

Query: 634 QLAP-YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--------LIHGLCKRG 684
            +AP Y + +    + G+++ A+ +   ++E       PS VK        LI  LC   
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV------PSSVKTDNDMYASLIQALCLAS 738

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
            ++ A  ++    + GF+    V   L++ L+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLV 770



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 274/616 (44%), Gaps = 47/616 (7%)

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           +  GD E  L+ FG       +P    YNA++ +        L   V  EM +     + 
Sbjct: 22  HAAGDSEDPLKDFGY------RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDR 75

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            T     + L K G+   A+ M++   +     +    T +ISGL + +  DEA     +
Sbjct: 76  FTVGCFAHALCKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHR 132

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+ + C P+ V Y  LL+GF K +++     ++     +G  P    ++ L+      K 
Sbjct: 133 MRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 192

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD------AMKLLSDMRERGIVPD 342
           Y  AY    +M      P  V+Y + I  +    K+        A K+  +M     V +
Sbjct: 193 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 252

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
                   +  C +G  D+A  L  E+ ++  +P+T T++ +I  +C    V+ A  LF 
Sbjct: 253 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 312

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M+  G  P V  +  LID  CKAG +E+A  LF +M  +G +PT+              
Sbjct: 313 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTV-------------- 358

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++  Y  A  + +A  I  ++ ++G  P+ +TY +L++G CK GNI+ A +++ +
Sbjct: 359 VTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAK 418

Query: 522 L----------------QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           L                    L P+ VTYG L++GL +  + + A  +   M  +GC P+
Sbjct: 419 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 478

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLL 624
             VY +L+   C+  K   A  ++LQ  +        +  S I+   + G ++ A++ L 
Sbjct: 479 HIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 538

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           +M        +  YT  + GLC+ G+ ++AL + S++ E        +   LI GL K G
Sbjct: 539 QMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAG 598

Query: 685 YLDLAMDVFLYTLKNG 700
            +DL++D+F    + G
Sbjct: 599 KIDLSLDLFTQMSRKG 614



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 212/527 (40%), Gaps = 50/527 (9%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +KD G  P  V YNAL+       +VD    + +   + GF     +  C    L +  R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           + +A     +   E  + D VL   MI GL EA    +AM  L  MR    +P+   Y  
Sbjct: 91  WADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+ GF     L   + +   +      PN   F  L+   C       A KL N+M   G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207

Query: 409 CFPSVGMFNALIDGLCKA----------------GELEKANLLFYKME----------IG 442
           C P   ++N  I  +C                  GE+  AN +  K+           +G
Sbjct: 208 CPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 443 KNPTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           K    F  + +   +  V D ++   ++   C A  + KA+ +  ++   G  PD+ TY 
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+ FCK G I  A  LF+E++  G  P  VTY  LI+   +  +   A  IF +M   
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE-------FLQK 613
           GC P+   Y +L+   C+    S AF ++ + +      D +     E+        +  
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 614 GEVENAIQGLLEMD--FKLNDFQLAP--------YTIWLIGLCQDGQVKEALNIFSVLVE 663
           G + + +    ++D   +L D  L+         Y   + G C+ G++  A  +F  + +
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           C  + +  +   LI  + K G LDLAM V    LK+     P V  Y
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS--CTPNVVTY 552



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 138/344 (40%), Gaps = 74/344 (21%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L K +  D   + LD + S        V+  LI G+ K G  + A E F +M + 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 508

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P V+ Y ++++  F+     LA+ V  +M+K +C PN+VT++ +I+GL + G++E A
Sbjct: 509 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 568

Query: 188 IKMLDEMTQRGILPNKFTYTIVISG----------------------------------- 212
           +K+L  M ++G  PN  TYT +I G                                   
Sbjct: 569 LKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINH 628

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC     D+A  L  +MK +        Y   + GF K      +L +L   E  G VP 
Sbjct: 629 LCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSK--SFIASLGILEEMESYGTVPI 686

Query: 273 LGSYSCLIDGLFRAKR-------------------------------------YDEAYAW 295
              Y  LID   +A R                                      +EA+  
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           Y +M      P++ ++  +I+GL E  K  +A++L   +   G+
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 35/277 (12%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYK 110
           F+   K   L S  + +++I  + K    DL  + L ++   + +     +  +I G  +
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCR 561

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           +G+ EKAL+    M+E  C P+V  Y A+++   +     L+L ++ +M +  C PN VT
Sbjct: 562 IGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVT 621

Query: 171 FSLLINGLSKSGKTEVA---------------------------------IKMLDEMTQR 197
           + +LIN L  +G  + A                                 + +L+EM   
Sbjct: 622 YRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESY 681

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKD--SGCSPDFVAYNALLNGFCKLRRVD 255
           G +P    Y ++I    +  R + A  L  +M +  S    D   Y +L+   C   +V+
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           EA  L     + GFVP L  + CLI GL   K++DEA
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 288/623 (46%), Gaps = 30/623 (4%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRK-RLRSFASNSAVISMLLKPNGFDLYW--QTLDELRSG 92
           S  +    P V  + F    + K +      N+ +I ++  P+ F +    +  D++   
Sbjct: 139 SAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKI 198

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            VS+    F VL++GY   G  E AL    +M  EF   PD   YN +L    +K     
Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD 258

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
              +  +M K   +PN VT++ L+ G  K G  + A ++++ M Q  +LP+  TY I+I+
Sbjct: 259 LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC      E   L   MK     PD V YN L++G  +L    EA  L+   E DG   
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
              +++  +  L + ++ +      +++ +     PD+V Y  +I+   + G +  A+++
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           + +M ++GI  +T   N ++   C    LD+A +L     KR  + +  T+  LI G  R
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
              V+ A +++++M+K    P+V  FN+LI GLC  G+ E A      ME       F  
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA------MEK------FDE 546

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           L++ G  + D ++  +++  YC  G + KA++   +  +    PD  T N L+NG CK G
Sbjct: 547 LAESG-LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               AL  F  L ++    D+VTY T+I+   +  + ++A+ +  +M + G  P    Y 
Sbjct: 606 MTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           S ++      K S    L    L+  SG+      S++  LQ    +N      E   +L
Sbjct: 665 SFISLLMEDGKLSETDEL----LKKFSGK----FGSMKRDLQVETEKNPATS--ESKEEL 714

Query: 631 NDFQLAPYTIWLIGLCQDGQVKE 653
           N   +A Y+  +  LC  G++KE
Sbjct: 715 NTEAIA-YSDVIDELCSRGRLKE 736



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 149/571 (26%), Positives = 261/571 (45%), Gaps = 94/571 (16%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA---DEA 222
           P+   F + ++     GK  VA+++  +M +  + PN  T   ++ GL +   +     A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F  M   G S +   +N L+NG+C   ++++AL +L                     
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE-------------------- 228

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                         R + E K+ PD V Y  +++ +S+ G++ D  +LL DM++ G+VP+
Sbjct: 229 --------------RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQKLF 401
              YN L+ G+C LG L +A  + VE+ K+ + LP+  T+ ILI G+C  G + +  +L 
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
           + M+     P V  +N LIDG  + G   +A  L  +ME               N+V   
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND---------GVKANQVTHN 384

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            SL+ + ++     +  K  +++      G  PDI+TY++LI  + KVG+++GAL++ +E
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDM---HGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 522 LQLKGLR-----------------------------------PDSVTYGTLINGLQRVDR 546
           +  KG++                                    D VTYGTLI G  R ++
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            E A  ++ +M +   TP+ + + SL+   C   K  LA   + +        DD +  S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 607 -IEEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            I  + ++G VE A +     ++  FK +++      I L GLC++G  ++ALN F+ L+
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC---NILLNGLCKEGMTEKALNFFNTLI 618

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           E + + T  +   +I   CK   L  A D+ 
Sbjct: 619 EEREVDT-VTYNTMISAFCKDKKLKEAYDLL 648


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/715 (24%), Positives = 305/715 (42%), Gaps = 19/715 (2%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSG 92
           V   +     P      F  AA++ R+    ++   +  L++ +G      +  D ++  
Sbjct: 95  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 154

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            V      F  +  G    G    A  +   MKE     + Y YN ++    +      A
Sbjct: 155 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 214

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L VY  M+    +P++ T+S+L+    K    E  + +L EM   G+ PN ++YTI I  
Sbjct: 215 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 274

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L Q  R DEAYR+  KM++ GC PD + +  L+   C   R+ +A  +    +K    P 
Sbjct: 275 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 334

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y  L+D              +  M  +    +VV Y  +I  L + G+V +A+++  
Sbjct: 335 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 394

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+++GIVP+ Y YN+LI GF        A  L   +      PN +T  + I    ++G
Sbjct: 395 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 454

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
               A + +  M+  G  P V   NA++ GL K+G L  A  +F++++ +G +P      
Sbjct: 455 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP------ 508

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +   M++    A    +A KI   + E+  +PD++  NSLI+   K G 
Sbjct: 509 --------DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 560

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A ++F +L+   L P   TY TL+ GL R  + ++   +  +M  +   P+   Y +
Sbjct: 561 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 620

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           ++   C+    + A  +           D  S  ++   L K E  N    +     K+ 
Sbjct: 621 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 680

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               A     L    + G +KEAL+I     ++  +     SC  L+ G+ K+  ++ ++
Sbjct: 681 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 740

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +       +G  L       L++ L   K  K + A+ L+ + KS G  L   LY
Sbjct: 741 EFAEIIASSGITLDDFFLCPLIKHL--CKQKKALEAHELVKKFKSFGVSLKTGLY 793



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 274/600 (45%), Gaps = 24/600 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+  + K  D E  L    +M+    +P+VY Y   + +  + + F  A  +  +M
Sbjct: 232 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 291

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+++T ++LI  L  +G+   A  +  +M +    P++ TY  ++        +
Sbjct: 292 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 351

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                ++  MK  G + + VAY A+++  C++ RV EAL +    ++ G VP   SY+ L
Sbjct: 352 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 411

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +A R+ +A   ++ M     +P+   + + I    ++G+   A++    M+ +GI
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 471

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD    NA++ G    G L  A+ +  E+      P+T T+T++I    +    D+A K
Sbjct: 472 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 531

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F  M +  C P V   N+LID L KAG  ++A  +FY++ E+   PT            
Sbjct: 532 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT------------ 579

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T++      G + +   +L ++  S   P++ITYN++++  CK G +N AL +
Sbjct: 580 --DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM 637

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +  KG  PD  +Y T+I GL + +R  +AF IF QM +    P  A   +++    +
Sbjct: 638 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVK 696

Query: 579 RRKFSLAFSLWLQYLRDISGRDDES--MKSIEEFLQKGEVENAIQG---LLEMDFKLNDF 633
                 A  +   Y      + D S     +E  L+K  +E +I+    +      L+DF
Sbjct: 697 IGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDF 756

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L P    +  LC+  +  EA  +          +       LI GL     +D+A  +F
Sbjct: 757 FLCP---LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 813



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 245/579 (42%), Gaps = 85/579 (14%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +AVI  L +        +  DE++   +      +  LISG+ K      ALE F  M  
Sbjct: 374 TAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDI 433

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+ Y +   +N   +    + A+  Y  M     +P++V  + ++ GL+KSG+  +
Sbjct: 434 HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGM 493

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++  E+   G+ P+  TYT++I    + ++ DEA ++F  M ++ C PD +A N+L++
Sbjct: 494 AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLID 553

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
              K  R DEA  +    ++    P  G+Y+ L+ GL R  +  E      +M+     P
Sbjct: 554 TLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 613

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG-------------- 352
           +++ Y  ++  L + G V DA+ +L  M  +G +PD   YN +I G              
Sbjct: 614 NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 673

Query: 353 --------------------FCDLGLLDQA--------------------RSLQVEIWKR 372
                               F  +GL+ +A                     SL   I K+
Sbjct: 674 CQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 733

Query: 373 DSLPNTHTFTILICG----------------MCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +  +  F  +I                  +C+     +A +L  K +  G     G++
Sbjct: 734 AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 793

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N+LI GL     ++ A  LF +M E+G  P              D+ +   +++    + 
Sbjct: 794 NSLICGLVDENLIDIAEGLFAEMKELGCGP--------------DEFTYNLLLDAMGKSM 839

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I +  K+  ++   G     +TYN++I+G  K   +  A+ L+  L  +G  P   TYG
Sbjct: 840 RIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 899

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            L++GL +  R EDA  +F +M + GC  +  +Y  L+ 
Sbjct: 900 PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 938



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 19/447 (4%)

Query: 97  VSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           V DV  V  LI   YK G  ++A   F ++KE + +P    YN +L    R+      + 
Sbjct: 542 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 601

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +  EM   N  PN++T++ +++ L K+G    A+ ML  MT +G +P+  +Y  VI GL 
Sbjct: 602 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 661

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRL 273
           +  R +EA+ +F +MK     PD+     +L  F K+  + EAL +++  F + G     
Sbjct: 662 KEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 720

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            S   L++G+ +    +++  +   +    I  D      +I+ L +  K  +A +L+  
Sbjct: 721 SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 780

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            +  G+   T  YN+LI G  D  L+D A  L  E+ +    P+  T+ +L+  M ++  
Sbjct: 781 FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 840

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLS 452
           +++  K+  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT      
Sbjct: 841 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPT------ 894

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   +++    AG I  A  +  ++ E G   +   YN L+NG    GN 
Sbjct: 895 --------PCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNT 946

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLIN 539
                LF+++  +G+ PD  +Y  +I+
Sbjct: 947 EKVCHLFQDMVDQGINPDIKSYTIIID 973



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 4/254 (1%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESF 121
           +S  +++  +LK  G +   +  + + S  +++  D FF+  LI    K     +A E  
Sbjct: 721 SSCHSLMEGILKKAGIEKSIEFAEIIASSGITL--DDFFLCPLIKHLCKQKKALEAHELV 778

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            K K F       +YN+++     + L  +A  ++ EM +L C P+  T++LL++ + KS
Sbjct: 779 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 838

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            + E  +K+ +EM ++G      TY  +ISGL +  R ++A  L+  +   G SP    Y
Sbjct: 839 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 898

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
             LL+G  K  R+++A  L     + G       Y+ L++G   A   ++    ++ M +
Sbjct: 899 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 958

Query: 302 EKIEPDVVLYGVMI 315
           + I PD+  Y ++I
Sbjct: 959 QGINPDIKSYTIII 972



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 94/198 (47%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + + + +S  VS+ + ++  LI G       + A   F +MKE  C PD + YN +L+  
Sbjct: 776 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 835

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +       L V  EM +       VT++ +I+GL KS + E AI +   +  +G  P  
Sbjct: 836 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 895

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  ++ GL +  R ++A  LF +M + GC  +   YN LLNG       ++   L + 
Sbjct: 896 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 955

Query: 264 FEKDGFVPRLGSYSCLID 281
               G  P + SY+ +ID
Sbjct: 956 MVDQGINPDIKSYTIIID 973


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 226/498 (45%), Gaps = 46/498 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +      ++G  ++AL     M    C PD  +Y  V++    +     A  +  EM
Sbjct: 174 TFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM 233

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC---QI 216
             + C  ++ TF+ +++GL   G+   A +++D M  RG +PN  TY  ++ GLC   Q+
Sbjct: 234 FLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQV 293

Query: 217 NRA----------------------------DEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
             A                             EA  L+  M   GC PD   Y+ L++G 
Sbjct: 294 EEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGL 353

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CKL R+  A+ LLR  E  GF P + +Y+ L+    R   +D   A    M ++ +  ++
Sbjct: 354 CKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNL 413

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  MI  + +  ++ DAM+ + +M+ +G  PD   YN +I   C+   +++A  L   
Sbjct: 414 EGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFEN 473

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +     + N  T+  LI  + RNG   DA  L N M   GC   +  +N LI  LC+ G 
Sbjct: 474 LLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGN 533

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++++ +L  +M E G  P              +  S   ++ + C    +  A ++  ++
Sbjct: 534 VDRSIMLLSEMAEKGIKP--------------NNVSYNLLISELCKTRRVRDALELSKEM 579

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                 PDI+TYN+LING CK+G ++ AL L ++L  + +  D +TY  LI+   +    
Sbjct: 580 LNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLL 639

Query: 548 EDAFRIFGQMPQNGCTPS 565
            DA  +  +   +G TP+
Sbjct: 640 HDASMLLNRAVTSGITPN 657



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 214/459 (46%), Gaps = 42/459 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL +   M +  C+P+ V +  +I+ L   G    A  +LDEM   G   +  T+  ++ 
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC + R  EA RL  +M   GC P+ + Y  LL G C   +V+EA  +L      G VP
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML------GRVP 304

Query: 272 RLGSY-------SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            L           CL+DG     +  EA   Y  M  +   PD   Y ++I GL + G++
Sbjct: 305 ELNVVLFNTVIGRCLLDG-----KLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRL 359

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTI 383
             AMKLL +M ++G  P    Y  L+  FC  G+ D  R++ +E+     L  N   +  
Sbjct: 360 GSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAM-LEVMSDKGLSMNLEGYNG 418

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---- 439
           +IC +C++  +DDA +   +M+  G  P +  +N +I  LC   ++E+A  LF  +    
Sbjct: 419 MICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEG 478

Query: 440 ----EIGKNPTLFLRLSQGGNR----------VH----DKASLQTMVEQYCTAGLIHKAY 481
                I  N  +   L  G  +          +H    D  S   +++  C  G + ++ 
Sbjct: 479 VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSI 538

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L ++AE G  P+ ++YN LI+  CK   +  AL+L KE+  + L PD VTY TLINGL
Sbjct: 539 MLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGL 598

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            ++     A  +  ++           Y  L++W C+ R
Sbjct: 599 CKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 237/530 (44%), Gaps = 54/530 (10%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYR 224
           P+  +++ ++   +++      + +   M  R  + P  FT++I    LC++ RADEA  
Sbjct: 134 PSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALT 193

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           +   M   GC PD V Y  +++  C    V+EA  LL      G    + +++ ++ GL 
Sbjct: 194 MLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLC 253

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
              R  EA     +M      P+ + YG +++GL  A +V++A  +L  + E  +V    
Sbjct: 254 TLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVV---- 309

Query: 345 CYNALIKGFCDL-GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
            +N +I G C L G L +A  L   +  +   P+ HT++ILI G+C+ G +  A KL  +
Sbjct: 310 LFNTVI-GRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLRE 368

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           ME  G  PS+  +  L+   C+ G  +    +   +E+  +  L + L +G N       
Sbjct: 369 MEDKGFAPSIVTYTILLHSFCRNGMWDNIRAM---LEVMSDKGLSMNL-EGYN------- 417

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              M+   C    +  A + + ++   G  PDI TYN++I   C    +  A  LF+ L 
Sbjct: 418 --GMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLL 475

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            +G+  +++TY TLI+ L R    +DA  +   M  +GC+     Y  L+   CR     
Sbjct: 476 HEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCR----- 530

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
                         G  D S+  + E  +KG   N +                 Y + + 
Sbjct: 531 -------------DGNVDRSIMLLSEMAEKGIKPNNVS----------------YNLLIS 561

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            LC+  +V++AL +   ++  +      +   LI+GLCK G++  A+++ 
Sbjct: 562 ELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLL 611



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 189/406 (46%), Gaps = 19/406 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G       E+A    G++ E +    V ++N V+           A  +Y  M    
Sbjct: 283 LLKGLCLASQVEEARTMLGRVPELN----VVLFNTVIGRCLLDGKLKEAAELYETMGSKG 338

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+  T+S+LI+GL K G+   A+K+L EM  +G  P+  TYTI++   C+    D   
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIR 398

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M D G S +   YN ++   CK RR+D+A+  ++  +  G+ P + +Y+ +I  L
Sbjct: 399 AMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               + +EA   +  +  E +  + + Y  +I  L   G  +DA+ L +DM   G   D 
Sbjct: 459 CNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDI 518

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN LIK  C  G +D++  L  E+ ++   PN  ++ +LI  +C+   V DA +L  +
Sbjct: 519 VSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKE 578

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKA 462
           M      P +  +N LI+GLCK G +  A  L  K+                  VH D  
Sbjct: 579 MLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLH--------------NEDVHADII 624

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           +   ++  +C A L+H A  +L +   SG  P+  T+  ++  F +
Sbjct: 625 TYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 211/505 (41%), Gaps = 66/505 (13%)

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           P   SY+ ++    RA  + +  + YR+M   +++ P    + +  R L   G+  +A+ 
Sbjct: 134 PSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALT 193

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L  M   G VPDT  Y  +I   C  G +++A +L  E++      + +TF  ++ G+C
Sbjct: 194 MLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLC 253

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
             G + +A +L ++M   GC P+   +  L+ GLC A ++E+A  +     +G+ P L +
Sbjct: 254 TLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTM-----LGRVPELNV 308

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
            L              T++ +    G + +A ++   +   G  PD  TY+ LI+G CK+
Sbjct: 309 VL------------FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKL 356

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD------------------------ 545
           G +  A+KL +E++ KG  P  VTY  L++   R                          
Sbjct: 357 GRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGY 416

Query: 546 -----------REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
                      R +DA R   +M   G  P    Y +++   C   +   A  L+   L 
Sbjct: 417 NGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLH 476

Query: 595 DISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
           +    +  +  + I   L+ G  ++AI    +M        +  Y   +  LC+DG V  
Sbjct: 477 EGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDR 536

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCK----RGYLDLAMDVFLYTLKNGFILRPRVCN 709
           ++ + S + E        S   LI  LCK    R  L+L+ ++    L    +    + N
Sbjct: 537 SIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLIN 596

Query: 710 YLLR--------SLLFSKDNKKVHA 726
            L +        +LL    N+ VHA
Sbjct: 597 GLCKMGWMHAALNLLEKLHNEDVHA 621



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 21/282 (7%)

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G   +A  +L  +A  G +PD + Y ++I+  C  G +N A  L  E+ L G   D 
Sbjct: 183 CRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADV 242

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
            T+  +++GL  + R  +A R+  +M   GC P+   Y  L+   C   +   A      
Sbjct: 243 NTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA------ 296

Query: 592 YLRDISGRDDESM-----KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
             R + GR  E         I   L  G+++ A +    M  K        Y+I + GLC
Sbjct: 297 --RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           + G++  A+ +   + E K     PS V    L+H  C+ G  D    +       G  +
Sbjct: 355 KLGRLGSAMKLLREM-EDKGFA--PSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSM 411

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                N ++ ++   KD +   A   +  MKS GY  D C Y
Sbjct: 412 NLEGYNGMICAV--CKDRRMDDAMRFMQEMKSQGYKPDICTY 451



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 65/148 (43%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
             S + +I  L +    D     L E+    +   +  + +LIS   K      ALE   
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M   +  PD+  YN ++N   +      AL +  ++   +   +I+T+++LI+   K+ 
Sbjct: 578 EMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKAR 637

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVI 210
               A  +L+     GI PN+ T+ I++
Sbjct: 638 LLHDASMLLNRAVTSGITPNERTWGIMV 665


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 190/711 (26%), Positives = 316/711 (44%), Gaps = 98/711 (13%)

Query: 24  PLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLY 82
           P   F+S ++V S   K   PQ+   FF  A   + LR + A+ +A++  L +       
Sbjct: 84  PFGNFVS-SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQL------ 136

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
                    G V  VSD                  L S+ + +EF    DV  Y++ +  
Sbjct: 137 ---------GRVREVSD------------------LVSWMEREEF--VFDVVFYSSWICG 167

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            FR+ + + A+  + EM++    P+ V++++LI+G S+ G  E AI  L++M + G+ PN
Sbjct: 168 YFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPN 227

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYT ++ G C+  + DEAY LF  +++ G   D   Y  L++GFC    +D    LL 
Sbjct: 228 LVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             EK G  P + +Y+ +I+GL +A R  EA         + I  D V +  ++ G  E  
Sbjct: 288 DMEKRGISPSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEE 342

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            VK  ++    + E G+  D    N +IK    +G L+ A +    +   D + ++ T+ 
Sbjct: 343 NVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYC 402

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKA------------GCFP--------------SVGMF 416
            +I G CR   +++A ++F++  K             G FP              +V   
Sbjct: 403 TMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFP 462

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            +++  L K G +  A    YK+ IG    L          V D      M++  C  G 
Sbjct: 463 VSVLKSLKKNGRILDA----YKLVIGAEENL---------PVMDLVDYSIMIDVLCKEGH 509

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + KA  +   + + G   +I  YNS+ING C+ G +  A +LF  L+   L P  +TY T
Sbjct: 510 LDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYAT 569

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI+ L +     DA ++F +M   G  P+  VY SL+   C+      A +L +  L+  
Sbjct: 570 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLID-LKAR 628

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFK--LNDFQLAPYTIWLIGLCQDGQVK 652
             + DE   S  I  +  KG++E A+    E   K  L DF    Y +   GLC  G+++
Sbjct: 629 CIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVR--GLCAKGRME 686

Query: 653 EALNIFSVLVECKAI----------VTPPSCVKLIHGLCKRGYLDLAMDVF 693
           EA  I   +++ +++          +   S    I  LC++G +  A+ V 
Sbjct: 687 EARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVL 737



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 254/544 (46%), Gaps = 41/544 (7%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LP-NKFTYTIVISGLCQI 216
           +  L  LP+  TF  LI+  +  GK   AI++L+ MT   +  P   F  + VISG C+I
Sbjct: 41  LTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSVISGFCKI 100

Query: 217 NRADEAYRLFLKMKDSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           ++   A   F    +S    P+     ALL    +L RV E   L+   E++ FV  +  
Sbjct: 101 SKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVF 160

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS  I G FR     EA   +++M E+ I PD V Y ++I G S  G V+ A+  L  M+
Sbjct: 161 YSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMK 220

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G+ P+   Y A++ GFC  G LD+A +L   +       +   +  LI G C  G +D
Sbjct: 221 KDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDID 280

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
               L   MEK G  PS+  +N++I+GLCKAG   +A+      E+ K           G
Sbjct: 281 CVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEAD------EVSKGI--------AG 326

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           + V     L   +E+    G++    +    L E G   D++  N++I     VG +  A
Sbjct: 327 DAVTFSTLLHGYIEEENVKGILETKRR----LEEDGVCIDLVMCNTIIKALLMVGALEDA 382

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
              +K +    L  DSVTY T+ING  RV R E+A  IF +            ++     
Sbjct: 383 YAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDE------------FRKTSIS 430

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMK-----SIEEFLQK-GEVENAIQGLLEMDFK 629
           SC    F +    +   +R I   + E++      S+ + L+K G + +A + ++  +  
Sbjct: 431 SCYL--FFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEEN 488

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           L    L  Y+I +  LC++G + +AL++ + + +    +   +   +I+GLC++G L  A
Sbjct: 489 LPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQA 548

Query: 690 MDVF 693
             +F
Sbjct: 549 FRLF 552



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 274/601 (45%), Gaps = 81/601 (13%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LI G+ + G  EKA+    KMK+   +P++  Y A++ + F K+  L      ++MV
Sbjct: 196 YTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIM-LGFCKKGKLDEAYTLFKMV 254

Query: 161 K-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           + L    +   +  LI+G    G  +    +L++M +RGI P+  TY  +I+GLC+  R 
Sbjct: 255 ENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRT 314

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  +       G + D V ++ LL+G+ +   V   L   R  E+DG    L   + +
Sbjct: 315 SEADEV-----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTI 369

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L      ++AYA+Y+ M    +  D V Y  MI G     ++++A+++  + R+  I
Sbjct: 370 IKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSI 429

Query: 340 VPDTYCYNALIK-GF---CDLGLLDQAR-----------------------SLQVEIWKR 372
              + CY   ++ GF   C   + +  +                       + ++ I   
Sbjct: 430 ---SSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAE 486

Query: 373 DSLP--NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           ++LP  +   ++I+I  +C+ G +D A  L   ++K G   ++  +N++I+GLC+ G L 
Sbjct: 487 ENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLV 546

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +A  LF  +E               + V  + +  T+++  C  G +  A ++  ++   
Sbjct: 547 QAFRLFDSLE-------------KIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIK 593

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G  P++  YNSLI+G+CK GN+  AL L  +L+ + ++PD  T   LING       E A
Sbjct: 594 GFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGA 653

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
              F +  +    P    +  L+   C +                  GR +E+   + E 
Sbjct: 654 LGFFFEFKKKDILPDFLGFMYLVRGLCAK------------------GRMEEARGILREM 695

Query: 611 LQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           LQ        + +LE+  +++ + +      ++I LC+ G ++EA+   +VL E  +I  
Sbjct: 696 LQT-------RSVLELINRVDTEIETESVESFIISLCEQGSIQEAV---TVLNEVGSIFF 745

Query: 670 P 670
           P
Sbjct: 746 P 746



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 248/550 (45%), Gaps = 37/550 (6%)

Query: 174 LINGLS-KSGKTEVAIKML-DEMTQRGILPNKFTYTIVISGLC---QINRADEAYRLFLK 228
           LI GL  K    E A+ +L D +T  GILP+ FT+  +I       +++RA E   L   
Sbjct: 19  LIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTH 78

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAK 287
            K      +FV+ +++++GFCK+ +   A+    +      + P + + + L+  LF+  
Sbjct: 79  DKVRYPFGNFVS-SSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQLG 137

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
           R  E       M  E+   DVV Y   I G    G + +A++   +M E+GI PDT  Y 
Sbjct: 138 RVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYT 197

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            LI GF   G +++A    +E  K+D L PN  T+T ++ G C+ G +D+A  LF  +E 
Sbjct: 198 ILIDGFSREGYVEKAIGF-LEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVEN 256

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQ 465
            G      M+  LIDG C  G+++    L   ME  G +P++               +  
Sbjct: 257 LGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI--------------VTYN 302

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           +++   C AG   +A ++       G   D +T+++L++G+ +  N+ G L+  + L+  
Sbjct: 303 SIINGLCKAGRTSEADEV-----SKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEED 357

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G+  D V   T+I  L  V   EDA+  +  M           Y +++   CR  +   A
Sbjct: 358 GVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEA 417

Query: 586 FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
             ++ ++      R          F+Q+G     ++ + E + +       P ++ L  L
Sbjct: 418 LEIFDEF------RKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAF-PVSV-LKSL 469

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            ++G++ +A  +     E   ++       +I  LCK G+LD A+D+  +  K G  L  
Sbjct: 470 KKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNI 529

Query: 706 RVCNYLLRSL 715
              N ++  L
Sbjct: 530 YAYNSVINGL 539



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 209/480 (43%), Gaps = 61/480 (12%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           DE+  G ++  +  F  L+ GY +  + +  LE+  +++E     D+ + N ++      
Sbjct: 318 DEVSKG-IAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMV 376

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM------------ 194
                A A Y  M  ++ + + VT+  +ING  +  + E A+++ DE             
Sbjct: 377 GALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFF 436

Query: 195 TQRGILP---------NKFTYTI-----VISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            Q G  P          K T T+     V+  L +  R  +AY+L +  +++    D V 
Sbjct: 437 VQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVD 496

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+ +++  CK   +D+AL L    +K G    + +Y+ +I+GL R     +A+  +  + 
Sbjct: 497 YSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLE 556

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +  + P  + Y  +I  L + G + DA +L   M  +G  P+   YN+LI G+C  G ++
Sbjct: 557 KIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNME 616

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A +L +++  R   P+  T + LI G C  G ++ A   F + +K    P    F  L+
Sbjct: 617 EALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLV 676

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH---DKASLQTMVEQYCTAGLI 477
            GLC  G +E+A  +  +M   ++    +      NRV    +  S+++ +   C  G I
Sbjct: 677 RGLCAKGRMEEARGILREMLQTRSVLELI------NRVDTEIETESVESFIISLCEQGSI 730

Query: 478 HKAYKILMQLA-------------------------ESGNLPDIITYNSLINGFCKVGNI 512
            +A  +L ++                          +   +PD  +Y SLI   C  G +
Sbjct: 731 QEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKIYEGKGSRVPDFESYYSLIASLCSRGEL 790



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 190/413 (46%), Gaps = 33/413 (7%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  +  +I+GY +V   E+ALE F + ++       Y++        ++  F   +   +
Sbjct: 398 SVTYCTMINGYCRVSRIEEALEIFDEFRKTSISS-CYLFFV------QEGFFPGCMRSIH 450

Query: 158 EMVKLNCLPNIVTFSL-LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           E  K       V F + ++  L K+G+   A K++    +   + +   Y+I+I  LC+ 
Sbjct: 451 ENEKETI---TVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKE 507

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              D+A  L   +K  G + +  AYN+++NG C+   + +A  L  S EK   VP   +Y
Sbjct: 508 GHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITY 567

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LID L +     +A   + KM  +   P+V +Y  +I G  + G +++A+ LL D++ 
Sbjct: 568 ATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKA 627

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           R I PD +  +ALI G+C  G ++ A     E  K+D LP+   F  L+ G+C  G +++
Sbjct: 628 RCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRMEE 687

Query: 397 AQKLFNKM----------EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-----EI 441
           A+ +  +M           +           + I  LC+ G +++A  +  ++      I
Sbjct: 688 ARGILREMLQTRSVLELINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPI 747

Query: 442 GKNPTLFLRLSQ-------GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           G+      R  +        G+RV D  S  +++   C+ G + +A +   Q+
Sbjct: 748 GRRCRPQNRAEKEEKIYEGKGSRVPDFESYYSLIASLCSRGELLEANRKTRQM 800



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 8/253 (3%)

Query: 499 YNSLINGFC-KVGNINGALKLFKE-LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ++SLI G C K+ +   AL + ++ L   G+ P S T+ +LI+      +   A  +   
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 557 MPQNGCTPSPA--VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQ 612
           M  +         V  S+++  C+  K  LA   +   +     R + +  +  +    Q
Sbjct: 76  MTHDKVRYPFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQ 135

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G V      +  M+ +   F +  Y+ W+ G  ++G + EA+     ++E        S
Sbjct: 136 LGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVS 195

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              LI G  + GY++ A+       K+G  L+P +  Y    L F K  K   AY L   
Sbjct: 196 YTILIDGFSREGYVEKAIGFLEKMKKDG--LKPNLVTYTAIMLGFCKKGKLDEAYTLFKM 253

Query: 733 MKSVGYDLDACLY 745
           ++++G ++D  +Y
Sbjct: 254 VENLGIEVDEFMY 266


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 235/498 (47%), Gaps = 48/498 (9%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           + + + A+  F +M      P +  +N +L+   + + +  A+++ + +      P+++T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LIN     G+      +L ++ +RG  P+  T   +I GLC   +  +A     K+ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G   + V+Y  L+NG CK+     A+ LLR  +     P +  YS +ID L + +   
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EAY  + +M  + I  DVV Y  +I G    GK+K+A+ LL++M  + I P+ Y YN L+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 351 KGFCDLGLLDQARS-------------------------LQVEIWKRDSL---------- 375
              C  G + +A+S                         L  E+ K   +          
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           P+ HT+TILI G C+N MVD+A  LF +M +    P +  +++LIDGLCK+G +     L
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +M     P              D  +  ++++  C  G + +A  +  ++ +    P+
Sbjct: 397 IDEMRDRGQPA-------------DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPN 443

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           I T+  L++G CK G +  A ++F++L  KG   +  TY  +ING  +    E+A  +  
Sbjct: 444 IFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLS 503

Query: 556 QMPQNGCTPSPAVYKSLM 573
           +M  NGC P+   +++++
Sbjct: 504 KMEDNGCIPNAFTFETII 521



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 213/402 (52%), Gaps = 10/402 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
           Q+ F F + A   KR   +  ++  ++ L+K  G  L  Q        D+L +    +  
Sbjct: 109 QITFGFSVLAKILKR--GYPPDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K+GD   A++   K+     +P+V +Y+ +++   + QL   A  ++ E
Sbjct: 165 VSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       ++VT+S LI G    GK + AI +L+EM  + I PN +TY I++  LC+  +
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +   M  +   PD + Y+ L++G+  +  V +A  +  +    G  P + +Y+ 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  + K  DEA   +++M ++ + P +V Y  +I GL ++G++     L+ +MR+RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              D   Y++LI G C  G LD+A +L  ++  ++  PN  TFTIL+ G+C+ G + DAQ
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           ++F  +   G   +V  +N +I+G CK G LE+A  +  KME
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 243/529 (45%), Gaps = 28/529 (5%)

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           I   D+A   F +M     +P  + +N +L+ F K++    A++L    E  G  P L +
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + LI+      +    ++   K+ +    PD V    +I+GL   G+VK A+     + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G   +   Y  LI G C +G    A  L  +I  R + PN   ++ +I  +C+  +V 
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQG 454
           +A  LF++M   G    V  ++ LI G C  G+L++A  L  +M +   NP ++      
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY------ 270

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                   +   +V+  C  G + +A  +L  + ++   PD+ITY++L++G+  V  +  
Sbjct: 271 --------TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A  +F  + L G+ PD  TY  LING  +    ++A  +F +M Q    P    Y SL+ 
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLND 632
             C+  +    + L +  +RD     D    S  I+   + G ++ AI     +  K+ D
Sbjct: 383 GLCKSGRIPYVWDL-IDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI----ALFNKMKD 437

Query: 633 FQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDL 688
            ++ P    +TI L GLC+ G++K+A  +F  L+     +   +   +I+G CK+G L+ 
Sbjct: 438 QEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 497

Query: 689 AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           A+ +      NG I        ++ +L    +N K  A  LL +M + G
Sbjct: 498 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDK--AEKLLRQMIARG 544



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K       +    E+    +S     +  LI G+   G  ++A+    +M  
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+VY YN +++   ++     A +V   M+K    P+++T+S L++G     + + 
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + + M+  G+ P+  TYTI+I+G C+    DEA  LF +M      P  V Y++L++
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R+     L+      G    + +YS LIDGL +    D A A + KM +++I P
Sbjct: 383 GLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRP 442

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           ++  + +++ GL + G++KDA ++  D+  +G   + Y YN +I G C  GLL++A ++ 
Sbjct: 443 NIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 502

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            ++     +PN  TF  +I  + +    D A+KL  +M   G
Sbjct: 503 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY+ V + +KA   F  M      PDV+ Y  ++N   + ++   AL ++ EM
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + N +P IVT+S LI+GL KSG+      ++DEM  RG   +  TY+ +I GLC+    
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 425

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  LF KMKD    P+   +  LL+G CK  R+ +A  + +     G+   + +Y+ +
Sbjct: 426 DRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +    +EA     KM +    P+   +  +I  L +  +   A KLL  M  RG+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545

Query: 340 V 340
           +
Sbjct: 546 L 546



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 90/194 (46%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K        F    ++  +    + S++I  L K       W  +DE+R         
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  K G  ++A+  F KMK+ + +P+++ +  +L+   +      A  V+ ++
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +      N+ T++++ING  K G  E A+ ML +M   G +PN FT+  +I  L + +  
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 220 DEAYRLFLKMKDSG 233
           D+A +L  +M   G
Sbjct: 531 DKAEKLLRQMIARG 544


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 174/715 (24%), Positives = 305/715 (42%), Gaps = 19/715 (2%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSG 92
           V   +     P      F  AA++ R+    ++   +  L++ +G      +  D ++  
Sbjct: 60  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 119

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            V      F  +  G    G    A  +   MKE     + Y YN ++    +      A
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 179

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L VY  M+    +P++ T+S+L+    K    E  + +L EM   G+ PN ++YTI I  
Sbjct: 180 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 239

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L Q  R DEAYR+  KM++ GC PD + +  L+   C   R+ +A  +    +K    P 
Sbjct: 240 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 299

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y  L+D              +  M  +    +VV Y  +I  L + G+V +A+++  
Sbjct: 300 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 359

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+++GIVP+ Y YN+LI GF        A  L   +      PN +T  + I    ++G
Sbjct: 360 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 419

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
               A + +  M+  G  P V   NA++ GL K+G L  A  +F++++ +G +P      
Sbjct: 420 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP------ 473

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +   M++    A    +A KI   + E+  +PD++  NSLI+   K G 
Sbjct: 474 --------DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 525

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A ++F +L+   L P   TY TL+ GL R  + ++   +  +M  +   P+   Y +
Sbjct: 526 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 585

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           ++   C+    + A  +           D  S  ++   L K E  N    +     K+ 
Sbjct: 586 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 645

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               A     L    + G +KEAL+I     ++  +     SC  L+ G+ K+  ++ ++
Sbjct: 646 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 705

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +       +G  L       L++ L   K  K + A+ L+ + KS G  L   LY
Sbjct: 706 EFAEIIASSGITLDDFFLCPLIKHL--CKQKKALEAHELVKKFKSFGVSLKTGLY 758



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 274/600 (45%), Gaps = 24/600 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+  + K  D E  L    +M+    +P+VY Y   + +  + + F  A  +  +M
Sbjct: 197 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 256

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+++T ++LI  L  +G+   A  +  +M +    P++ TY  ++        +
Sbjct: 257 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                ++  MK  G + + VAY A+++  C++ RV EAL +    ++ G VP   SY+ L
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +A R+ +A   ++ M     +P+   + + I    ++G+   A++    M+ +GI
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 436

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD    NA++ G    G L  A+ +  E+      P+T T+T++I    +    D+A K
Sbjct: 437 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 496

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F  M +  C P V   N+LID L KAG  ++A  +FY++ E+   PT            
Sbjct: 497 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT------------ 544

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T++      G + +   +L ++  S   P++ITYN++++  CK G +N AL +
Sbjct: 545 --DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM 602

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +  KG  PD  +Y T+I GL + +R  +AF IF QM +    P  A   +++    +
Sbjct: 603 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVK 661

Query: 579 RRKFSLAFSLWLQYLRDISGRDDES--MKSIEEFLQKGEVENAIQG---LLEMDFKLNDF 633
                 A  +   Y      + D S     +E  L+K  +E +I+    +      L+DF
Sbjct: 662 IGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDF 721

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L P    +  LC+  +  EA  +          +       LI GL     +D+A  +F
Sbjct: 722 FLCP---LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 778



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 255/544 (46%), Gaps = 46/544 (8%)

Query: 97   VSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
            V DV  V  LI   YK G  ++A   F ++KE + +P    YN +L    R+      + 
Sbjct: 507  VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 566

Query: 155  VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
            +  EM   N  PN++T++ +++ L K+G    A+ ML  MT +G +P+  +Y  VI GL 
Sbjct: 567  LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 626

Query: 215  QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRL 273
            +  R +EA+ +F +MK     PD+     +L  F K+  + EAL +++  F + G     
Sbjct: 627  KEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 685

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             S   L++G+ +    +++  +   +    I  D      +I+ L +  K  +A +L+  
Sbjct: 686  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 745

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
             +  G+   T  YN+LI G  D  L+D A  L  E+ +    P+  T+ +L+  M ++  
Sbjct: 746  FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 805

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT------ 446
            +++  K+  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT      
Sbjct: 806  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 865

Query: 447  LFLRLSQGGNRVHDKASLQTMVEQY-----CT-----------AGLIHKAYKILMQLAES 490
            L   L + G R+ D  +L   + +Y     CT           AG   K   +   + + 
Sbjct: 866  LLDGLLKAG-RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 924

Query: 491  GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            G  PDI +Y  +I+  CK G +N  L  F++L   GL PD +TY  LI+GL +  R E+A
Sbjct: 925  GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 984

Query: 551  FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
              +F +M + G  P+   Y SL+    +                  +G+  E+ K  EE 
Sbjct: 985  VSLFNEMQKKGIVPNLYTYNSLILHLGK------------------AGKAAEAGKMYEEL 1026

Query: 611  LQKG 614
            L KG
Sbjct: 1027 LTKG 1030



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 170/734 (23%), Positives = 298/734 (40%), Gaps = 127/734 (17%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +AVI  L +        +  DE++   +      +  LISG+ K      ALE F  M  
Sbjct: 339  TAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDI 398

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               +P+ Y +   +N   +    + A+  Y  M     +P++V  + ++ GL+KSG+  +
Sbjct: 399  HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGM 458

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++  E+   G+ P+  TYT++I    + ++ DEA ++F  M ++ C PD +A N+L++
Sbjct: 459  AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLID 518

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  R DEA  +    ++    P  G+Y+ L+ GL R  +  E      +M+     P
Sbjct: 519  TLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 578

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG-------------- 352
            +++ Y  ++  L + G V DA+ +L  M  +G +PD   YN +I G              
Sbjct: 579  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638

Query: 353  --------------------FCDLGLLDQA--------------------RSLQVEIWKR 372
                                F  +GL+ +A                     SL   I K+
Sbjct: 639  CQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 698

Query: 373  DSLPNTHTFTILICG----------------MCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
              +  +  F  +I                  +C+     +A +L  K +  G     G++
Sbjct: 699  AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 758

Query: 417  NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            N+LI GL     ++ A  LF +M E+G  P              D+ +   +++    + 
Sbjct: 759  NSLICGLVDENLIDIAEGLFAEMKELGCGP--------------DEFTYNLLLDAMGKSM 804

Query: 476  LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
             I +  K+  ++   G     +TYN++I+G  K   +  A+ L+  L  +G  P   TYG
Sbjct: 805  RIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 864

Query: 536  TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             L++GL +  R EDA  +F +M + GC  +  +Y  L+                      
Sbjct: 865  PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG------------------HR 906

Query: 596  ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
            I+G  ++     ++ + +G         +  D K        YTI +  LC+ GQ+ + L
Sbjct: 907  IAGNTEKVCHLFQDMVDQG---------INPDIK-------SYTIIIDTLCKAGQLNDGL 950

Query: 656  NIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
              F  L+E   +   P  +    LI GL K   L+ A+ +F    K G +  P +  Y  
Sbjct: 951  TYFRQLLE---MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--PNLYTYNS 1005

Query: 713  RSLLFSKDNKKVHA 726
              L   K  K   A
Sbjct: 1006 LILHLGKAGKAAEA 1019



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 243/544 (44%), Gaps = 52/544 (9%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    D  W+   +L+  N+      +  L++G  + G  ++ +    +M  
Sbjct: 514  NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 573

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             +  P++  YN +L+   +      AL + Y M    C+P++ +++ +I GL K  +   
Sbjct: 574  SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 633

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL----FLK-------------- 228
            A  +  +M ++ ++P+  T   ++    +I    EA  +    FL+              
Sbjct: 634  AFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLM 692

Query: 229  ------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
                              +  SG + D      L+   CK ++  EA  L++ F+  G  
Sbjct: 693  EGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVS 752

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + G Y+ LI GL      D A   + +M E    PD   Y +++  + ++ ++++ +K+
Sbjct: 753  LKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 812

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              +M  +G       YN +I G      L+QA  L   +  +   P   T+  L+ G+ +
Sbjct: 813  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 872

Query: 391  NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
             G ++DA+ LFN+M + GC  +  ++N L++G   AG  EK   LF  M + G NP    
Sbjct: 873  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP---- 928

Query: 450  RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                      D  S   +++  C AG ++       QL E G  PD+ITYN LI+G  K 
Sbjct: 929  ----------DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 978

Query: 510  GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
              +  A+ LF E+Q KG+ P+  TY +LI  L +  +  +A +++ ++   G  P+   Y
Sbjct: 979  KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1038

Query: 570  KSLM 573
             +L+
Sbjct: 1039 NALI 1042



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 173/340 (50%)

Query: 84   QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            + + + +S  VS+ + ++  LI G       + A   F +MKE  C PD + YN +L+  
Sbjct: 741  ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 800

Query: 144  FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +       L V  EM +       VT++ +I+GL KS + E AI +   +  +G  P  
Sbjct: 801  GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860

Query: 204  FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             TY  ++ GL +  R ++A  LF +M + GC  +   YN LLNG       ++   L + 
Sbjct: 861  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920

Query: 264  FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
                G  P + SY+ +ID L +A + ++   ++R++ E  +EPD++ Y ++I GL ++ +
Sbjct: 921  MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 980

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            +++A+ L ++M+++GIVP+ Y YN+LI      G   +A  +  E+  +   PN  T+  
Sbjct: 981  LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1040

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            LI G   +G  D A   + +M   GC P+   +  L + L
Sbjct: 1041 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 180/369 (48%), Gaps = 15/369 (4%)

Query: 174  LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            LI  L K  K   A +++ +    G+      Y  +I GL   N  D A  LF +MK+ G
Sbjct: 726  LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785

Query: 234  CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            C PD   YN LL+   K  R++E L +     + G+     +Y+ +I GL +++R ++A 
Sbjct: 786  CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845

Query: 294  AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              Y  +  +   P    YG ++ GL +AG+++DA  L ++M E G   +   YN L+ G 
Sbjct: 846  DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905

Query: 354  CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
               G  ++   L  ++  +   P+  ++TI+I  +C+ G ++D    F ++ + G  P +
Sbjct: 906  RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 965

Query: 414  GMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
              +N LIDGL K+  LE+A  LF +M+  G  P L+              +  +++    
Sbjct: 966  ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLY--------------TYNSLILHLG 1011

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             AG   +A K+  +L   G  P++ TYN+LI G+   G+ + A   +  + + G  P+S 
Sbjct: 1012 KAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSS 1071

Query: 533  TYGTLINGL 541
            TY  L N L
Sbjct: 1072 TYMQLPNQL 1080



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 196/393 (49%), Gaps = 7/393 (1%)

Query: 64   ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESF 121
            +S  +++  +LK  G +   +  + + S  +++  D FF+  LI    K     +A E  
Sbjct: 686  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITL--DDFFLCPLIKHLCKQKKALEAHELV 743

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             K K F       +YN+++     + L  +A  ++ EM +L C P+  T++LL++ + KS
Sbjct: 744  KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 803

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
             + E  +K+ +EM ++G      TY  +ISGL +  R ++A  L+  +   G SP    Y
Sbjct: 804  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 863

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
              LL+G  K  R+++A  L     + G       Y+ L++G   A   ++    ++ M +
Sbjct: 864  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 923

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            + I PD+  Y ++I  L +AG++ D +     + E G+ PD   YN LI G      L++
Sbjct: 924  QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 983

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            A SL  E+ K+  +PN +T+  LI  + + G   +A K++ ++   G  P+V  +NALI 
Sbjct: 984  AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1043

Query: 422  GLCKAGELEKANLLFYKMEIG---KNPTLFLRL 451
            G   +G  + A   + +M +G    N + +++L
Sbjct: 1044 GYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 43/292 (14%)

Query: 62   SFASNSAVISMLLKP----NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
            ++ + + +IS L+K        DLY+     L S   S     +  L+ G  K G  E A
Sbjct: 824  TYVTYNTIISGLVKSRRLEQAIDLYYN----LMSQGFSPTPCTYGPLLDGLLKAGRIEDA 879

Query: 118  LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
               F +M E+ C+ +  IYN                                   +L+NG
Sbjct: 880  ENLFNEMLEYGCKANCTIYN-----------------------------------ILLNG 904

Query: 178  LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
               +G TE    +  +M  +GI P+  +YTI+I  LC+  + ++    F ++ + G  PD
Sbjct: 905  HRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPD 964

Query: 238  FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
             + YN L++G  K +R++EA++L    +K G VP L +Y+ LI  L +A +  EA   Y 
Sbjct: 965  LITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYE 1024

Query: 298  KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            ++  +  +P+V  Y  +IRG S +G    A      M   G +P++  Y  L
Sbjct: 1025 ELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQL 1076


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 274/620 (44%), Gaps = 100/620 (16%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKN-PQVGFRFFIWAAKRKRL-----------------RSF 63
           LE L P L+ + V  VI + +N PQ+   F+ W   R                    R+F
Sbjct: 49  LEQLSPSLTNSLVCRVIREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNF 108

Query: 64  ASNSAVISMLLKPNG-----------------------FDLYWQTLDELRS--GNVSVVS 98
               +++  L+  NG                       F    +T  +LRS  G   V+ 
Sbjct: 109 NDALSIMESLILXNGKSPLEVLGGLMNSYEICNSNPAVFXALVRTCTQLRSVEGAYDVIR 168

Query: 99  DV----FFVLISGYYKV-------GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            +    F+V I  +          G+ +K    + +M       +V  +N ++     + 
Sbjct: 169 KLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNEC 228

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             L A+ V Y M+K+   PN+V F+++I+  +K G+ ++A+K+   +             
Sbjct: 229 KLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGEMDLALKLTRNIE------------ 276

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VISG                      SP+ VAYN ++NGFCK+RR++ A  +L    K 
Sbjct: 277 -VISG-------------------GSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKL 316

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G      +Y+ LIDG  R    D A+    +M E ++ PD  +Y  +I  L   G++++A
Sbjct: 317 GIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEA 376

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             LLSDM  R I+PD + Y+ L KG C  G L++A  +   I +R  + +  T+ ILI  
Sbjct: 377 SFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINY 436

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           M ++  +  A++L + M   G  P +  +   +DG CK G++E A +  Y   +  N  L
Sbjct: 437 MFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAA-VQIYDKAVVYNSIL 495

Query: 448 FLRLSQGG-------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
                QG              N   D  +  T++  +C  G I KA+ + +++   G+L 
Sbjct: 496 DGLCKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLV 555

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           +I++YN +IN  CK+G I  A++L + +  +G+ PD +TY TLI         ED   + 
Sbjct: 556 NIVSYNIMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELH 615

Query: 555 GQMPQNGCTPSPAVYKSLMT 574
           G M   G  P    Y+S ++
Sbjct: 616 GYMMLKGAVPDRKTYRSFVS 635



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 225/539 (41%), Gaps = 71/539 (13%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           N   +  ++    Q+   + AY +  K++  G      A+N  LN   KL   D+   + 
Sbjct: 143 NPAVFXALVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMY 202

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           +     G+   + +++ +I  L    +  EA      M + +I P+VV + ++I   ++ 
Sbjct: 203 KEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKM 262

Query: 322 GKVKDAMKLLSDMR---ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           G++  A+KL  ++       + P+   YN +I GFC +  L+ A+++  E+ K     N 
Sbjct: 263 GEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNE 322

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+  LI G  R G +D A +L ++M +    P   ++N+LI  L   GELE+A+ L   
Sbjct: 323 RTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFL--- 379

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
                       LS   NR                        +IL         PD  T
Sbjct: 380 ------------LSDMINR------------------------RIL---------PDEFT 394

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y+ L  G C  G++N AL++   +  + L  D+ TY  LIN + +      A ++   M 
Sbjct: 395 YSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMI 454

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G  P    Y + +   C+  K   A  ++ + +   S  D           ++G +  
Sbjct: 455 VGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKAVVYNSILDG--------LCKQGSIYA 506

Query: 619 AIQGLLEMDFKLNDFQLAP--YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           A   LL    + N F L P  Y   L G C +G++++A  +F  ++   ++V   S   +
Sbjct: 507 A--KLLVDKLQQNGF-LDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIM 563

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF-----SKDNKKVHAYHLL 730
           I+ LCK G +  AM++       G I  P +  Y      F     S+D  ++H Y +L
Sbjct: 564 INFLCKMGLIQQAMELMRAMSSQGII--PDLITYTTLITNFVETCGSEDVIELHGYMML 620



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 212/509 (41%), Gaps = 95/509 (18%)

Query: 291 EAYAWY--RKMFEEKIEPDVVLYGVMI--RGLSEAGKVKDAMKLL---SDMRERGIVPDT 343
           E Y W   R  F   +E    L  V++  R  ++A  + +++ L    S +   G + ++
Sbjct: 77  EFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVLGGLMNS 136

Query: 344 Y--------CYNALIKGFCDL----GLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCR 390
           Y         + AL++    L    G  D  R L++E  W        H +   +  + +
Sbjct: 137 YEICNSNPAVFXALVRTCTQLRSVEGAYDVIRKLRLEGFW-----VTIHAWNNFLNLLLK 191

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY---KMEIGKNPTL 447
            G  D    ++ +M  +G   +V  FN +I  LC   +L +A  + Y   K+EI  N   
Sbjct: 192 LGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVX 251

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL--MQLAESGNL-PDIITYNSLIN 504
           F       N + DKA+           G +  A K+   +++   G++ P+I+ YN +IN
Sbjct: 252 F-------NMIIDKAN---------KMGEMDLALKLTRNIEVISGGSVSPNIVAYNCIIN 295

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GFCK+  +  A  +  E+   G+  +  TY TLI+G  R    + AFR+  +M +    P
Sbjct: 296 GFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIP 355

Query: 565 SPAVYKSLMTW-----SCRRRKFSLAFSLWLQYLRD------------ISGRDDESMKSI 607
              VY SL+ W           F L+  +  + L D            +SG  +++++  
Sbjct: 356 DTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVH 415

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLA-------------------PYTIWLIGLCQD 648
              +++  V +A    + +++      +A                    Y   + G C++
Sbjct: 416 YYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKE 475

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G+++ A+ I+      KA+V       ++ GLCK+G +  A  +     +NGF L P   
Sbjct: 476 GKIEAAVQIYD-----KAVVYN----SILDGLCKQGSIYAAKLLVDKLQQNGF-LDPVTY 525

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           N LL     + + +K  A+ L   M +VG
Sbjct: 526 NTLLHGFCVNGEIEK--AFALFLEMINVG 552



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 54/112 (48%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+   G+ EKA   F +M       ++  YN ++N   +  L   A+ +   M    
Sbjct: 528 LLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMSSQG 587

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            +P+++T++ LI    ++  +E  I++   M  +G +P++ TY   +S   Q
Sbjct: 588 IIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTYRSFVSPCLQ 639


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 216/432 (50%), Gaps = 15/432 (3%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD+   + ++N    +    LA +V+  ++K    PN +T + LI GL   G+ + A+  
Sbjct: 90  PDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYF 149

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D++  +G   ++ +Y  +I+GLC+        RL  K++     PD V YN ++N  CK
Sbjct: 150 HDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK 209

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            + + +A  +       G  P + +Y+ LI G        EA++   +M  + I P+V  
Sbjct: 210 NKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCT 269

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + ++I  LS+ GK+K+A  LL+ M +  I PD + YN+LI G+  +  +  A+ +   + 
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +R   P+   +T +I G+C+  MVD+A  LF +M+     P +  +N+LIDGLCK   LE
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           +A  L  +M E G  P ++              S   +++  C +G +  A +I  +L  
Sbjct: 390 RAIALCKRMKEQGIQPDVY--------------SYTILLDGLCKSGRLEDAKEIFQRLLA 435

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G   ++  Y  LIN  CK G  + AL L  +++ KG  PD+VT+  +I  L   D  + 
Sbjct: 436 KGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDK 495

Query: 550 AFRIFGQMPQNG 561
           A +I  +M   G
Sbjct: 496 AEKILREMIARG 507



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 205/438 (46%), Gaps = 15/438 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+A +  M+ +   P    F+ +++ L  +      I +  +    GI P+  T +I+I+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C       A+ +F  +   G  P+ +  N L+ G C    + +AL         GF  
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY  LI+GL +           RK+    ++PDVV+Y  +I  L +   + DA  + 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           S+M  +GI PD   Y  LI GFC +G L +A SL  E+  ++  PN  TF ILI  + + 
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G + +A+ L   M KA   P V  +N+LIDG     E++ A  +FY M + G  P     
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTP----- 335

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D      M+   C   ++ +A  +  ++     +PDI+TYNSLI+G CK  
Sbjct: 336 ---------DVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNH 386

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           ++  A+ L K ++ +G++PD  +Y  L++GL +  R EDA  IF ++   G   +   Y 
Sbjct: 387 HLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYT 446

Query: 571 SLMTWSCRRRKFSLAFSL 588
            L+   C+   F  A  L
Sbjct: 447 VLINRLCKAGFFDEALDL 464



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 200/401 (49%), Gaps = 10/401 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF------DLYWQTLDELRSGNVSVVS 98
            +   F ++A   KR   F  N+  ++ L+K   F       LY+   D+L +    +  
Sbjct: 107 HITLAFSVFANILKR--GFHPNAITLNTLIKGLCFRGEIKKALYFH--DQLVAQGFQLDQ 162

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K G+ +       K++    +PDV +YN ++N   + +L   A  VY E
Sbjct: 163 VSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSE 222

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+     P++VT++ LI+G    G  + A  +L+EM  + I PN  T+ I+I  L +  +
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  L   M  +   PD   YN+L++G+  +  V  A  +  S  + G  P +  Y+ 
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +I+GL + K  DEA + + +M  + + PD+V Y  +I GL +   ++ A+ L   M+E+G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I PD Y Y  L+ G C  G L+ A+ +   +  +    N H +T+LI  +C+ G  D+A 
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            L +KME  GC P    F+ +I  L +  E +KA  +  +M
Sbjct: 463 DLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREM 503



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 215/427 (50%), Gaps = 17/427 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN-IAFRKQLFLLALAVYYEMVK 161
           +LI+ +        A   F  + +    P+    N ++  + FR ++   AL  + ++V 
Sbjct: 97  ILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEI-KKALYFHDQLVA 155

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
                + V++  LINGL K+G+T+   ++L ++    + P+   Y  +I+ LC+     +
Sbjct: 156 QGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGD 215

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  ++ +M   G SPD V Y  L++GFC +  + EA +LL   +     P + +++ LID
Sbjct: 216 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILID 275

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            L +  +  EA      M +  I+PDV  Y  +I G     +VK A  +   M +RG+ P
Sbjct: 276 ALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTP 335

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D  CY  +I G C   ++D+A SL  E+  ++ +P+  T+  LI G+C+N  ++ A  L 
Sbjct: 336 DVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALC 395

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN-RVHD 460
            +M++ G  P V  +  L+DGLCK+G LE A  +F ++           L++G +  VH 
Sbjct: 396 KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL-----------LAKGYHLNVH- 443

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   ++ + C AG   +A  +  ++ + G +PD +T++ +I    +    + A K+ +
Sbjct: 444 --AYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILR 501

Query: 521 ELQLKGL 527
           E+  +GL
Sbjct: 502 EMIARGL 508



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 207/460 (45%), Gaps = 49/460 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P  F +  ++S L           LF + + +G +PD    + L+N FC    +  A ++
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
             +  K GF P   + + LI GL       +A  ++ ++  +  + D V YG +I GL +
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ K   +LL  +    + PD   YN +I   C   LL  A  +  E+  +   P+  T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-YKM 439
           +T LI G C  G + +A  L N+M+     P+V  FN LID L K G++++A +L    M
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +    P +F              +  ++++ Y     +  A  +   +A+ G  PD+  Y
Sbjct: 295 KACIKPDVF--------------TYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            ++ING CK   ++ A+ LF+E++ K + PD VTY +LI+GL +    E A  +  +M +
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            G  P    Y  L+   C+                  SGR +++ +  +  L KG     
Sbjct: 401 QGIQPDVYSYTILLDGLCK------------------SGRLEDAKEIFQRLLAKG----- 437

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                   + LN   +  YT+ +  LC+ G   EAL++ S
Sbjct: 438 --------YHLN---VHAYTVLINRLCKAGFFDEALDLKS 466



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 212/506 (41%), Gaps = 52/506 (10%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A  ++ L L M+     P    +N +L+     +     ++L + FE +G  P L + S 
Sbjct: 41  AVASFNLMLLMRPP---PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSI 97

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+          A++ +  + +    P+ +    +I+GL   G++K A+     +  +G
Sbjct: 98  LINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQG 157

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              D   Y  LI G C  G       L  ++      P+   +  +I  +C+N ++ DA 
Sbjct: 158 FQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 217

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNR 457
            ++++M   G  P V  +  LI G C  G L++A  L  +M++   NP +          
Sbjct: 218 DVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNV---------- 267

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                +   +++     G + +A  +L  + ++   PD+ TYNSLI+G+  V  +  A  
Sbjct: 268 ----CTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKY 323

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           +F  +  +G+ PD   Y  +INGL +    ++A  +F +M      P    Y SL+   C
Sbjct: 324 VFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLC 383

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
           +      A +L             + MK           E  IQ             +  
Sbjct: 384 KNHHLERAIALC------------KRMK-----------EQGIQP-----------DVYS 409

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           YTI L GLC+ G++++A  IF  L+     +   +   LI+ LCK G+ D A+D+     
Sbjct: 410 YTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKME 469

Query: 698 KNGFILRPRVCNYLLRSLLFSKDNKK 723
             G +      + ++R+L    +N K
Sbjct: 470 DKGCMPDAVTFDIIIRALFEKDENDK 495



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 138/260 (53%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L+E++  N++     F +LI    K G  ++A      M +   +PDV+ YN++++ 
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F       A  V+Y M +    P++  ++ +INGL K+   + A+ + +EM  + ++P+
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  +I GLC+ +  + A  L  +MK+ G  PD  +Y  LL+G CK  R+++A  + +
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G+   + +Y+ LI+ L +A  +DEA     KM ++   PD V + ++IR L E  
Sbjct: 432 RLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKD 491

Query: 323 KVKDAMKLLSDMRERGIVPD 342
           +   A K+L +M  RG++ +
Sbjct: 492 ENDKAEKILREMIARGLLKE 511


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 171/619 (27%), Positives = 285/619 (46%), Gaps = 58/619 (9%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            + +L+ GY K G  E+A +   ++KE +    D   Y A++N   ++     A  V  E
Sbjct: 236 TYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDE 295

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+      N+  ++ +ING  K G+     K+L     RG+  ++++Y  ++ G C+   
Sbjct: 296 MIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGF 355

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             +A+     M  +G +   + YN LLNGFC    +D+AL L     K G VP   S S 
Sbjct: 356 MTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCST 415

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+DG F+A + ++A   +++     +  +VV    +I GL +  ++ +A +L   M+E  
Sbjct: 416 LLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS 475

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC---RNGMVD 395
              D+  Y  LI G+C LG L +A  +++E+     +P+   F   I G+    ++G V+
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL----- 449
           D +    +M   G  P+   + ALI G CK G L  A +L+++M E G  P LF+     
Sbjct: 536 DIRV---EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLV 592

Query: 450 -------RLSQGGNRVHDKASLQTMVEQYCTAGL--IHKAYKILMQLAESGNLPDIITYN 500
                  ++ +  N V  K +   M+ Q C+A    I K   I+  LA   +    I +N
Sbjct: 593 SCFYREGKVDE-ANLVLQKLADTDMI-QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWN 650

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +I G CK+G +  A  LF++L++KG  PD+ TY +LI+G       + AF +  +M   
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
             TP+   Y SL+   C+    S A SL+                   +   KG   NAI
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLF------------------NKLQSKGISPNAI 752

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
                            Y   + G C+DG   EA  +   +++     T  +   LIHGL
Sbjct: 753 ----------------TYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL 796

Query: 681 CKRGYLDLAMDVFLYTLKN 699
           C +GY++ A+ +    ++N
Sbjct: 797 CTQGYMEEAIKLLDQMIEN 815



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 246/518 (47%), Gaps = 41/518 (7%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           +E R  N+   S  +  L+ GY + G   KA E+   M           YN +LN    +
Sbjct: 331 NEYRGVNLDEYS--YNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                AL +++ M+K   +PN ++ S L++G  K+GKTE A+ +  E   RG+  N  T 
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             VI+GLC+  R  EA  LF +MK+  C  D + Y  L++G+CKL  +  A  +    E 
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN 508

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            GFVP +  ++  I GLF AK+  +      +M  + + P+ V YG +I G  + G + D
Sbjct: 509 LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT---- 382
           A  L  +M E+G+ P+ +  + L+  F   G +D+A  +  ++   D + +    T    
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIG 628

Query: 383 ----------------------ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
                                 I+I G+C+ G V DA+ LF  ++  G  P    +++LI
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
            G   +G ++ A  L       ++  L  RL+       +  +  +++   C +  + +A
Sbjct: 689 HGCSASGSIDLAFGL-------RDEMLSARLTP------NIVTYNSLIYGLCKSCNVSRA 735

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  +L   G  P+ ITYN+LI+G CK GN   A KL +++  +G++P   TY  LI+G
Sbjct: 736 VSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHG 795

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           L      E+A ++  QM +N   P+   Y +L+    R
Sbjct: 796 LCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYAR 833



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 171/658 (25%), Positives = 298/658 (45%), Gaps = 80/658 (12%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL V+ EM K      + + + L+N L ++G    A+ +  +M   G LP+ FT  I+  
Sbjct: 113 ALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAK 172

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
             C+  R   A     +M++ G   + VAY+A+++G+C++ + + A  LL S +  G  P
Sbjct: 173 AYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSP 232

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            + +Y+ L+ G  +  R +EA    +++ E EKI  D V YG +I G  + G+++DA ++
Sbjct: 233 NVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRV 292

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLL---------DQARSLQVEIWKRDSLPN---- 377
             +M + G+  + + YN +I G+C LG +         ++ R + ++ +  ++L +    
Sbjct: 293 RDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCR 352

Query: 378 ----------------------THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
                                 T T+  L+ G C  G +DDA KL+  M K G  P+   
Sbjct: 353 KGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEIS 412

Query: 416 FNALIDGLCKAGELEKA-----------------------NLLFYKMEIGKNPTLFLRLS 452
            + L+DG  KAG+ E+A                       N L     + +   LF R+ 
Sbjct: 413 CSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMK 472

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           +      D  + +T+++ YC  G + +A +I +++   G +P +  +NS I G       
Sbjct: 473 EWSCPC-DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQS 531

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
                +  E+  KGL P++VTYG LI G  +     DA  ++ +M + G  P+  +   L
Sbjct: 532 GKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVL 591

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           ++   R  K   A +L LQ L D     D S  +    L  G+V + I+ L   + +   
Sbjct: 592 VSCFYREGKVDEA-NLVLQKLADTDMIQDCSAST----LNIGKVAHIIESLAGGNHQSAK 646

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
                + I ++GLC+ G+V +A N+F  L     I    +   LIHG    G +DLA   
Sbjct: 647 IM---WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLA--- 700

Query: 693 FLYTLKNGFI---LRPRVCNYLLRSLLFS--KDNKKVHAYHLLCRMKSVGYDLDACLY 745
             + L++  +   L P +  Y   SL++   K      A  L  +++S G   +A  Y
Sbjct: 701 --FGLRDEMLSARLTPNIVTY--NSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 41/458 (8%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G++K G  E+AL  + +        +V   N V+N   + +    A  +++ M + 
Sbjct: 415 TLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEW 474

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           +C  + +T+  LI+G  K G    A ++  EM   G +P+   +   I+GL    ++ + 
Sbjct: 475 SCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKV 534

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             + ++M   G SP+ V Y AL+ G+CK   + +A  L     + G  P L   S L+  
Sbjct: 535 NDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSC 594

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDV--------------------------VLYGVMIR 316
            +R  + DEA    +K+ +  +  D                           +++ ++I 
Sbjct: 595 FYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVIL 654

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL + G+V DA  L  D++ +G +PD + Y++LI G    G +D A  L+ E+      P
Sbjct: 655 GLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTP 714

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+  LI G+C++  V  A  LFNK++  G  P+   +N LIDG CK G   +A  L 
Sbjct: 715 NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLK 774

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            KM + G  PT+F              +   ++   CT G + +A K+L Q+ E+   P+
Sbjct: 775 QKMIKEGIQPTVF--------------TYTILIHGLCTQGYMEEAIKLLDQMIENNVDPN 820

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            ITY +LI G+ + GN+    KL+ E+ + GL P + T
Sbjct: 821 FITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 193/439 (43%), Gaps = 26/439 (5%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S +T+     K    +     +     R   R+  + + VI+ L K        +    
Sbjct: 411 ISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHR 470

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++  +    S  +  LI GY K+GD  +A +   +M+     P V ++N+ +   F  + 
Sbjct: 471 MKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQ 530

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                 +  EM      PN VT+  LI G  K G    A  +  EM ++G+ PN F  ++
Sbjct: 531 SGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSV 590

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVA--------------------------YN 242
           ++S   +  + DEA  +  K+ D+    D  A                          +N
Sbjct: 591 LVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWN 650

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            ++ G CKL RV +A  L    +  GF+P   +YS LI G   +   D A+    +M   
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
           ++ P++V Y  +I GL ++  V  A+ L + ++ +GI P+   YN LI G C  G   +A
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
             L+ ++ K    P   T+TILI G+C  G +++A KL ++M +    P+   +  LI G
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830

Query: 423 LCKAGELEKANLLFYKMEI 441
             + G ++    L+ +M I
Sbjct: 831 YARCGNMKAITKLYNEMHI 849



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 238/504 (47%), Gaps = 35/504 (6%)

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +F +M  +G      + N LLN   +   +  A+A+ +     G +P   + + + 
Sbjct: 112 DALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMA 171

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               R  R   A  + ++M E  ++ ++V Y  ++ G    G+ + A KLL  ++ +G+ 
Sbjct: 172 KAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLS 231

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQK 399
           P+   Y  L+KG+C  G +++A  +  EI + + +  +   +  LI G C+ G ++DA +
Sbjct: 232 PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANR 291

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           + ++M  AG   ++ ++N +I+G CK G + +   L    E            +G N   
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEY-----------RGVNL-- 338

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D+ S  T+V+ YC  G + KA++    +  +G     +TYN+L+NGFC  G I+ ALKL+
Sbjct: 339 DEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLW 398

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +  +G+ P+ ++  TL++G  +  + E A  ++ +    G   +     +++   C+ 
Sbjct: 399 FLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKN 458

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP- 637
           R+ + A  L+ +        D  + ++ I+ + + G++  A Q  +EM+    +    P 
Sbjct: 459 RRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEME----NLGFVPS 514

Query: 638 ---YTIWLIGLC---QDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDL 688
              +  ++ GL    Q G+V +      + VE  A    P+ V    LI G CK G L  
Sbjct: 515 VEMFNSFITGLFIAKQSGKVND------IRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568

Query: 689 AMDVFLYTLKNGFILRPRVCNYLL 712
           A  ++   ++ G      +C+ L+
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLV 592



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 13/300 (4%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           LY++ +++    N+ + S    VL+S +Y+ G  ++A     K+ + D   D     + L
Sbjct: 572 LYFEMVEKGLKPNLFICS----VLVSCFYREGKVDEANLVLQKLADTDMIQDCSA--STL 625

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           NI     +        ++  K       + ++++I GL K G+   A  + +++  +G +
Sbjct: 626 NIGKVAHIIESLAGGNHQSAK-------IMWNIVILGLCKLGRVADARNLFEDLKVKGFI 678

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY+ +I G       D A+ L  +M  +  +P+ V YN+L+ G CK   V  A++L
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
               +  G  P   +Y+ LIDG  +     EA+   +KM +E I+P V  Y ++I GL  
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT 798

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G +++A+KLL  M E  + P+   Y  LI+G+   G +     L  E+     LP   T
Sbjct: 799 QGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 184/446 (41%), Gaps = 55/446 (12%)

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           + +++R  ++AG++KDA+ +  +M + G        N L+      G +  A ++  ++ 
Sbjct: 97  FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMR 156

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
              +LP+  T  I+    CR+G V  A     +ME+ G   ++  ++A++DG        
Sbjct: 157 CAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDG-------- 208

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
                                                   YC  G    A K+L  L   
Sbjct: 209 ----------------------------------------YCRIGQTEVARKLLHSLQVK 228

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREED 549
           G  P+++TY  L+ G+CK G +  A K+ KE+ + + +  D V YG LING  +  R ED
Sbjct: 229 GLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMED 288

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCR-RRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           A R+  +M   G   +  VY +++   C+  R   +   L     R ++  +      ++
Sbjct: 289 ANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVD 348

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
            + +KG +  A +    M           Y   L G C  G + +AL ++ ++++   + 
Sbjct: 349 GYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVP 408

Query: 669 TPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
              SC  L+ G  K G  + A++++  TL  G        N ++  L   K+ +   A  
Sbjct: 409 NEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL--CKNRRMTEAEE 466

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPG 754
           L  RMK      D+  Y   ++L+ G
Sbjct: 467 LFHRMKEWSCPCDSLTY---RTLIDG 489


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 255/547 (46%), Gaps = 49/547 (8%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  S + +IS LLK       +    ++    +S+   +   ++ G +K G  ++A E F
Sbjct: 305 NHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMF 364

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             + + +  P+   Y A+L+   +      A  V  +M K + LPN+VTFS +ING +K 
Sbjct: 365 QTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKK 424

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A+++L +M Q  I+PN F Y I++ G  +  + + A   + +MK  G   + + +
Sbjct: 425 GMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIF 484

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           + LLN   +   + EA +L++     G    + +YS L+DG F+      A +  ++M E
Sbjct: 485 DILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTE 544

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + ++ DVV Y  + +GL   GK  +   + S M E G+ PD   YN+++  +   G  + 
Sbjct: 545 KDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTEN 603

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS--------- 412
           A  L  E+     +PN  T+ ILI G+C+ G ++    + ++M   G  P+         
Sbjct: 604 ALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLK 663

Query: 413 --------------------VGM------FNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
                               +G+      +N LI  LC+ G  +KAN++  +M I     
Sbjct: 664 AYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISA 723

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        D  +   ++  YCT   + KA+    Q+  SG  P+I TYN+L+ G 
Sbjct: 724 -------------DIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
              G +  A KL  E++ +GL P++ TY  L++G  RV  + D+ +++ +M   G  P+ 
Sbjct: 771 STNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTT 830

Query: 567 AVYKSLM 573
             Y  L+
Sbjct: 831 GTYNVLI 837



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 181/744 (24%), Positives = 313/744 (42%), Gaps = 86/744 (11%)

Query: 74  LKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
           L   GF L    L E+    V   S    +L+ GY ++G  + A    G +       D 
Sbjct: 90  LADQGFGL----LSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDA 145

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
              N +++      L   AL +  +  K    P+IVT++ L+N   K G    A  +++E
Sbjct: 146 IGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNE 205

Query: 194 M------TQRGIL---------------PNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           +       + G+L               P   T+T +I+  C+    D+ + L+ +M  S
Sbjct: 206 ILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMS 265

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  PD V  +++L G C+  ++ EA  LLR     G  P   SY+ +I  L ++ R  EA
Sbjct: 266 GVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEA 325

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           +    +M    I  D+VL   M+ GL +AGK K+A ++   + +  +VP+   Y AL+ G
Sbjct: 326 FNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDG 385

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C +G ++ A ++  ++ K   LPN  TF+ +I G  + GM++ A ++  KM +    P+
Sbjct: 386 HCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPN 445

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLF------LRLSQG--------- 454
           V ++  L+DG  + G+ E A   + +M+   + +N  +F      L+ S G         
Sbjct: 446 VFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIK 505

Query: 455 ------------------------GNRVHDKASLQTMVEQ----------YCTAGLI--- 477
                                   GN     + +Q M E+            T GL+   
Sbjct: 506 DILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLG 565

Query: 478 -HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
            ++   +  ++ E G  PD +TYNS++N +   G    AL L  E++  G+ P+ VTY  
Sbjct: 566 KYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNI 625

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           LI GL +    E    +  +M   G  P+P ++K L+    R RK      +  + L D+
Sbjct: 626 LIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIH-KKLVDM 684

Query: 597 SGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
               ++ + +  I    + G  + A   L EM  K     +  Y   + G C    V++A
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKA 744

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
            N +S ++         +   L+ GL   G +  A  +     + G +  P    Y +  
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLV--PNATTYNILV 802

Query: 715 LLFSKDNKKVHAYHLLCRMKSVGY 738
               +   K  +  L C M + G+
Sbjct: 803 SGHGRVGNKRDSIKLYCEMITKGF 826



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/585 (22%), Positives = 267/585 (45%), Gaps = 62/585 (10%)

Query: 53  WAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFFV--LISGYY 109
           W   R    +  + + +I+   K  G D ++   +++  SG   V+ DV     ++ G  
Sbjct: 226 WDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG---VMPDVVTCSSILYGLC 282

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           + G   +A     +M      P+   Y  +++   +    + A     +MV      ++V
Sbjct: 283 RHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLV 342

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
             + +++GL K+GK++ A +M   + +  ++PN  TYT ++ G C++   + A  +  KM
Sbjct: 343 LCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKM 402

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           +     P+ V +++++NG+ K   +++A+ +LR   +   +P +  Y+ L+DG FR  ++
Sbjct: 403 EKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQH 462

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           + A  +Y++M    +E + +++ +++  L  +G +K+A  L+ D+  +GI  D + Y++L
Sbjct: 463 EAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSL 522

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR------------------- 390
           + G+   G    A S+  E+ ++D   +   +  L  G+ R                   
Sbjct: 523 MDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLT 582

Query: 391 ---------------NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
                           G  ++A  L N+M+  G  P++  +N LI GLCK G +EK   +
Sbjct: 583 PDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISV 642

Query: 436 FYKM-EIGKNPTLFL-----------RLSQGGNRVHDK----------ASLQTMVEQYCT 473
            ++M  +G  PT  +           R +    ++H K              T++   C 
Sbjct: 643 LHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCR 702

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G+  KA  +L ++   G   DI+TYN+LI G+C   ++  A   + ++ + G+ P+  T
Sbjct: 703 LGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITT 762

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           Y  L+ GL       DA ++  +M + G  P+   Y  L++   R
Sbjct: 763 YNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGR 807



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 201/427 (47%), Gaps = 18/427 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY+K G+   AL    +M E D Q DV  YNA+     R   +    +V+  M++L 
Sbjct: 522 LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELG 580

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+ VT++ ++N     GKTE A+ +L+EM   G++PN  TY I+I GLC+    ++  
Sbjct: 581 LTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVI 640

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  +M   G  P  + +  LL  + + R+ D  L + +     G       Y+ LI  L
Sbjct: 641 SVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVL 700

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R     +A     +M  + I  D+V Y  +IRG      V+ A    S M   GI P+ 
Sbjct: 701 CRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNI 760

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YNAL++G    GL+  A  L  E+ +R  +PN  T+ IL+ G  R G   D+ KL+ +
Sbjct: 761 TTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCE 820

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD-- 460
           M   G  P+ G +N LI    KAG++ +A  L  +M   G+ P          +  +D  
Sbjct: 821 MITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPN---------SSTYDVL 871

Query: 461 -----KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                K S Q  +++       ++A K+L ++ E G++P   T   + + F   G  + A
Sbjct: 872 ICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDA 931

Query: 516 LKLFKEL 522
            +L K +
Sbjct: 932 KRLLKTV 938



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 244/527 (46%), Gaps = 32/527 (6%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K   L +  + S++I+   K    +   + L ++   N+     V+ +L+ GY++ G  E
Sbjct: 404 KEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHE 463

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A   + +MK +  + +  I++ +LN   R      A ++  +++      ++  +S L+
Sbjct: 464 AAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLM 523

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +G  K G    A+ ++ EMT++ +  +   Y  +  GL ++ +  E   +F +M + G +
Sbjct: 524 DGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLT 582

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD V YN+++N +    + + AL LL   +  G +P + +Y+ LI GL +    ++  + 
Sbjct: 583 PDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISV 642

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             +M      P  +++  +++  S + K    +++   + + G+  +   YN LI   C 
Sbjct: 643 LHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCR 702

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG+  +A  +  E+  +    +  T+  LI G C    V+ A   +++M  +G  P++  
Sbjct: 703 LGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITT 762

Query: 416 FNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           +NAL++GL   G +  A+ L  +M    +  N T +  L  G  RV +K   +  ++ YC
Sbjct: 763 YNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNK---RDSIKLYC 819

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
                        ++   G +P   TYN LI  + K G +  A +L  E+  +G  P+S 
Sbjct: 820 -------------EMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSS 866

Query: 533 TYGTLING------------LQRVDREEDAFRIFGQMPQNGCTPSPA 567
           TY  LI G            L ++  + +A ++  +M + G  PS +
Sbjct: 867 TYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSES 913



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 145/652 (22%), Positives = 282/652 (43%), Gaps = 83/652 (12%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N + + VT++ ++ G  K G  +    +L EM ++G+  +  T  I++ G CQI     A
Sbjct: 70  NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYA 129

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +   +   G   D +  N L++G+C++  V  AL L+    K+G  P + +Y+ L++ 
Sbjct: 130 EWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNA 189

Query: 283 LFRAKRYDEAYA--------WYRKMFEEKI---------------EPDVVLYGVMIRGLS 319
               KR D A A         +R+  E  +               +P VV +  +I    
Sbjct: 190 F--CKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYC 247

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +   + D   L   M   G++PD    ++++ G C  G L +A  L  E++     PN  
Sbjct: 248 KHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHV 307

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           ++T +I  + ++G V +A    ++M   G    + +   ++DGL KAG+ ++A  +F  +
Sbjct: 308 SYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI 367

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                    L+L    N V +  +   +++ +C  G +  A  +L ++ +   LP+++T+
Sbjct: 368 ---------LKL----NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           +S+ING+ K G +N A+++ +++    + P+   Y  L++G  R  + E A   + +M  
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVEN 618
            G   +  ++  L+    R      A SL    L      D  +  S+ + + ++G    
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--- 675
           A+  + EM  K   F +  Y     GL + G+  E  ++FS ++E   +   P CV    
Sbjct: 535 ALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIE---LGLTPDCVTYNS 590

Query: 676 -----------------------------------LIHGLCKRGYLDLAMDVFLYTLKNG 700
                                              LI GLCK G ++  + V    L  G
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLL 752
           ++  P +  +LL++  +S+  K      +  ++  +G +L+  +Y    ++L
Sbjct: 651 YVPTPIIHKFLLKA--YSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVL 700



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 160/337 (47%), Gaps = 16/337 (4%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N  DL    L+E++S  V      + +LI G  K G  EK +    +M      P   I+
Sbjct: 603 NALDL----LNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIH 658

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
             +L    R +     L ++ ++V +    N + ++ LI  L + G T+ A  +L EM  
Sbjct: 659 KFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVI 718

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           +GI  +  TY  +I G C  +  ++A+  + +M  SG SP+   YNALL G      + +
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L+    + G VP   +Y+ L+ G  R     ++   Y +M  +   P    Y V+I+
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQ 838

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG-------LL-----DQARS 364
             ++AGK++ A +LL++M  RG +P++  Y+ LI G+C L        LL     ++A+ 
Sbjct: 839 DYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKK 898

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           L  E+ ++  +P+  T   +       G  DDA++L 
Sbjct: 899 LLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLL 935



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 192/473 (40%), Gaps = 61/473 (12%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    +N LL  F     V +   L       G VP + S + L+  L +      A  +
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            R    + +  + V++G   RGL++ G       LLS+M ++G+  D+   N L+KG+C 
Sbjct: 68  LRNSVFDHVTYNTVVWGFCKRGLADQG-----FGLLSEMVKKGVCFDSVTCNILVKGYCQ 122

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +GL+  A  +   +       +      L+ G C  G+V  A  L     K G  P +  
Sbjct: 123 IGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVT 182

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD--------------- 460
           +N L++  CK G+L KA  +        N  L  R       ++D               
Sbjct: 183 YNTLVNAFCKRGDLAKAESVV-------NEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +  T++  YC    I   + +  Q+  SG +PD++T +S++ G C+ G +  A  L +
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+   GL P+ V+Y T+I+ L +  R  +AF    QM   G +    +  ++M    +  
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFK-- 353

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
                           +G+  E+ +  +  L+   V N +                 YT 
Sbjct: 354 ----------------AGKSKEAEEMFQTILKLNLVPNCV----------------TYTA 381

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L G C+ G V+ A  +   + +   +    +   +I+G  K+G L+ A++V 
Sbjct: 382 LLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVL 434



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 159/378 (42%), Gaps = 41/378 (10%)

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           +G V   + L+++M   G  P+V   N L+  LCK G+L  A        +G     +LR
Sbjct: 23  SGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLA--------LG-----YLR 69

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                N V D  +  T+V  +C  GL  + + +L ++ + G   D +T N L+ G+C++G
Sbjct: 70  -----NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIG 124

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A  +   L   G+  D++   TL++G   V     A  +     +NG  P    Y 
Sbjct: 125 LVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYN 184

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISG--RDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           +L+   C+R   + A S+    + +I G  RDDES          G + +   G+   D 
Sbjct: 185 TLVNAFCKRGDLAKAESV----VNEILGFRRDDES----------GVLNDC--GVETWD- 227

Query: 629 KLNDFQ--LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
            L D Q  +  +T  +   C+   + +  +++  ++    +    +C  +++GLC+ G L
Sbjct: 228 GLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKL 287

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYP 746
             A  +       G  L P   +Y        K  + + A++   +M   G  +D  L  
Sbjct: 288 TEAAMLLREMYNMG--LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCT 345

Query: 747 KTKSLLPGPWNTREMENM 764
                L     ++E E M
Sbjct: 346 TMMDGLFKAGKSKEAEEM 363


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 263/570 (46%), Gaps = 52/570 (9%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASN-SAVISMLLKPN 77
           E ALE L   +    V S++       V  +FF WA KR+  +   S   A+I  L +  
Sbjct: 81  EKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMALIRCLEEAR 140

Query: 78  GFDLYWQTLDEL-RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
            +   ++T+ E+ R+  VSV   V   L+    +     KAL  F + K   C+P    Y
Sbjct: 141 LYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTY 200

Query: 137 NAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           N+V+ +  ++        VY EM  + +C P+ +T+S LI+   K G+ + AI++ DEM 
Sbjct: 201 NSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK 260

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
              + P +  YT ++    ++ + ++A  LF +MK +GCSP    Y  L+ G  K  RV+
Sbjct: 261 DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVE 320

Query: 256 EALALLRSFEKDGFVP-------------RLG----------------------SYSCLI 280
           EA  L ++   DG  P             ++G                      SY+ +I
Sbjct: 321 EAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVI 380

Query: 281 DGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
             LF +K    E  +W+ KM  + + P    Y ++I G  +  +V+ A+ LL +M E+G 
Sbjct: 381 KALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P    Y +LI         + A  L  E+ +     ++  + ++I    + G + +A  
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           LFN+M+  G  P V  +NAL+ G+ KAG + +AN L  KME            + G    
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKME------------ENGCTA- 547

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  S   ++  +   G+  +A ++   +   G  PD +TYN+L+  F   G    A +L 
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLM 607

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +E++ KG   D++TY ++++ +  +D E+D
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNMDHEKD 637



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 207/465 (44%), Gaps = 19/465 (4%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           TY  +I  L +     E YR   ++ +++  S   V  + L+    + + V +AL++   
Sbjct: 128 TYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQ 187

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
            +     P   +Y+ +I  L +  ++++ +  Y +M  E    PD + Y  +I    + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           +   A++L  +M++  + P    Y  L+  +  +G +++A  L  E+ +    P  +T+T
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG 442
            LI G+ + G V++A  L+  M   G  P V   N L++ L K G LE+   +F +M   
Sbjct: 308 ELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTW 367

Query: 443 K-NPTLFLRLSQGGNRVHDKASLQTMVEQ-YCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           +  PT+               S  T+++  + +   + +      ++   G  P   TY+
Sbjct: 368 RCTPTV--------------VSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYS 413

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            LI+G+CK   +  AL L +E+  KG  P    Y +LIN L +  R E A  +F ++ +N
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
               S  VY  ++    +  K S A  L+ +     SG D  +  ++   + K  + N  
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEA 533

Query: 621 QGLL-EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             LL +M+       +  + I L G  + G  + A+ +F  +  C
Sbjct: 534 NSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHC 578



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 172/410 (41%), Gaps = 31/410 (7%)

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC------Y 346
           +A  R+ F+     D   Y  +IR L EA    +  + + +     +V +TY        
Sbjct: 115 WAGKRRNFQH----DCSTYMALIRCLEEARLYGEMYRTIQE-----VVRNTYVSVGPVVL 165

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + L+K      ++ +A S+  +   R   P + T+  +I  + + G  +   +++ +M  
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225

Query: 407 AG-CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G CFP    ++ALI    K G  + A  LF +M   K+  +     Q   +++      
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM---KDNCM-----QPTEKIY-----T 272

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           T++  Y   G + KA  +  ++  +G  P + TY  LI G  K G +  A  L+K +   
Sbjct: 273 TLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD 332

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           GL PD V    L+N L +V R E+   +F +M    CTP+   Y +++      +     
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSE 392

Query: 586 FSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
            S W   ++       E   S  I+ + +   VE A+  L EMD K      A Y   + 
Sbjct: 393 VSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L +  + + A  +F  L E    V+      +I    K G L  A+D+F
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 118/246 (47%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D++++  VS     + +LI GY K    EKAL    +M E    P    Y +++N   +
Sbjct: 397 FDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            + +  A  ++ E+ +     +   ++++I    K GK   A+ + +EM  +G  P+ + 
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++SG+ +    +EA  L  KM+++GC+ D  ++N +LNGF +      A+ +  + +
Sbjct: 517 YNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMK 576

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G  P   +Y+ L+     A  ++EA    R+M ++  E D + Y  ++  +      K
Sbjct: 577 HCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAVGNMDHEK 636

Query: 326 DAMKLL 331
           D +  L
Sbjct: 637 DDVSSL 642


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 248/529 (46%), Gaps = 23/529 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++V+ +L+K    +      DEL +    +   +   L+ GY    +  KAL+ F +   
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P    Y  ++     + +   A  +  +M     LP+   F+++I GL      + 
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +  EM   GI P+ FTY I+I  LCQ  +  EA  L+ KM ++G  P  V Y++LL 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +C    +DEA+ L       GF P + +Y+ L+ G      +D+AYA   +M +  +  
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   Y  +I GL   G+V +  ++L      G VP    YN++I GF   G++  A ++ 
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++  +   PN  T+T  I G C+    D A K+ N +   G  P +  +N+LI G C+ 
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQE 609

Query: 427 GELEKA-NLLFYKMEIGKNPTLF-----------LRLSQGGNRVHDK----------ASL 464
           G +  A  +L   ++ G  P +            L++ +   R ++K          A+ 
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATY 669

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T+++ +   G +  A K+  ++   GN+PD IT+ +L +G C+ G+I+ A KL  E+  
Sbjct: 670 TTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNR 729

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             +RP+ + Y  LING  R  + ++AFR+  +M +    P    Y  L+
Sbjct: 730 LDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 165/629 (26%), Positives = 287/629 (45%), Gaps = 39/629 (6%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D ++++ V+   F++ ++  A+ ++ EM      P+    S+ I  L K      A+ +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +M   G +P  FT+  V+  L +  R +EA  +  ++  +G     V    L++G+C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           R V +AL +     +DG VP   +Y+ LI G       ++AY   R+M +  + P    +
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            ++I+GL      KDA+ L  +M + GI PD + YN LI   C    + +A +L  ++ +
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               P   T+  L+   C NG +D+A KL+ +M   G  P+V  +  L+ G       +K
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A  L  +M+            Q G   +D  +  T++   C  G + +  ++L +    G
Sbjct: 475 AYALLAEMK------------QNGVSCNDY-TYNTLINGLCVVGRVCEVGEMLKRFETEG 521

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
            +P  +TYNS+INGF K G +  A  +++++  KG+ P+ VTY + I+G  +    + A 
Sbjct: 522 FVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLAL 581

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEF 610
           ++   +   G  P  A Y SL+   C+    S A  + +  L+D    +     S I  +
Sbjct: 582 KMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGY 641

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
                +E A++   +M  +  D   A YT  + G  +DG V  AL ++S +V    I   
Sbjct: 642 KNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDH 701

Query: 671 PSCVKLIHGLCKRG-------------YLDLAMDVFLYT------LKNGFILRP-RVCNY 710
            +   L HGLC+ G              LD+  +V +Y       L+NG +    R+ + 
Sbjct: 702 ITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDE 761

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYD 739
           +L   +   D      Y +L  MKS+G D
Sbjct: 762 MLERKIMPDDT----TYDILVGMKSLGSD 786



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/603 (24%), Positives = 284/603 (47%), Gaps = 25/603 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V+    K   +D   +  DE+ +  +     V  V I+   K+ D  +AL    KM++  
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P  + +N+V+++  +      AL +  E++      ++V  + L++G     +   A+
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + +E  + G++P   TYT++I G  +    ++AY L  +M+D G  P    +N ++ G 
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
              +   +A++L +     G +P   +Y+ LI  L + ++  EA   + KM E  ++P +
Sbjct: 363 LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++      G + +A+KL ++M  +G  P+   Y  L+KG  +    D+A +L  E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +     N +T+  LI G+C  G V +  ++  + E  G  P+   +N++I+G  KAG 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +  A  ++ +M   G  P +               +  + ++ YC       A K+L  +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNI--------------VTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G  PDI  YNSLI GFC+ GN++ AL++   +   GL P+   Y + I G + +   
Sbjct: 588 RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           E+A R + +M + G     A Y +L+    +    + A  L+ + +   +  D  +  ++
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 608 EEFL-QKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLV 662
              L + G++++A + L EM    N   + P    Y + + G  ++G+++EA  +   ++
Sbjct: 708 THGLCRNGDIDDARKLLDEM----NRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 663 ECK 665
           E K
Sbjct: 764 ERK 766



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 4/329 (1%)

Query: 61  RSFASNSAVISMLLKPN----GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           + F  N    + L+K +     FD  +  L E++   VS     +  LI+G   VG   +
Sbjct: 450 KGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCE 509

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
             E   + +     P    YN+++N   +  +   A AVY +M      PNIVT++  I+
Sbjct: 510 VGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFID 569

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           G  K+   ++A+KML+++  +G+ P+   Y  +I G CQ      A ++ + M   G  P
Sbjct: 570 GYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLP 629

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   YN+ + G+  L+ ++EAL       K+G      +Y+ LIDG  +      A   Y
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M  +   PD + +  +  GL   G + DA KLL +M    I P+   YN LI G+   
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           G L +A  L  E+ +R  +P+  T+ IL+
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 233/559 (41%), Gaps = 62/559 (11%)

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM  +G   + + + +V+    +    D+A RLF +M  S   PD    +  +   CKLR
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
             + AL +LR  +  GFVP   +++ ++D L +  R +EA     ++     +  VVL  
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ G     +V+ A+ +  +    G+VP                               
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDV---------------------------- 318

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
                  T+T+LI G    GM + A +L  +M   G  PS   FN +I GL      + A
Sbjct: 319 -------TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             LF +M     P  F              +   ++   C    I +A  +  ++ E+G 
Sbjct: 372 VSLFKEMADSGIPDAF--------------TYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            P I+TY+SL+  +C  G ++ A+KL+ E+  KG  P+ VTY TL+ G       + A+ 
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM---KSIEE 609
           +  +M QNG + +   Y +L+   C   +      +  ++  +  G    +M     I  
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRF--ETEGFVPTAMTYNSIING 535

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F++ G + +A     +M  K     +  YT ++ G C+      AL + +  V CK +  
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND-VRCKGLRP 594

Query: 670 PPSCV-KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV--HA 726
             +    LI+G C+ G +  A+ V +  LK+G +  P +  Y   S +    N K+   A
Sbjct: 595 DIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLL--PNISVY--NSFITGYKNLKMMEEA 650

Query: 727 YHLLCRMKSVGYDLDACLY 745
                +M   G DLD   Y
Sbjct: 651 LRFYEKMIKEGIDLDTATY 669


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/626 (25%), Positives = 287/626 (45%), Gaps = 23/626 (3%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  V   +  + VL+ G  K    ++A+E    M       D   Y  ++    R + 
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
             +AL + ++M++L  +P+    S +I+ L K    E A  +  ++   G++PN F Y  
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I  LC+  R D+A RLF +M   G  P+ V Y  L++  CK   +++AL L       G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               +  Y+ LI+G  +    D A      M +E + P    Y  +I GL   G +  AM
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
           +L  +M ERGI  + Y + ALI GFC    +D+A  L  ++   + +PN  TF ++I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           C  G +  A +L+++M + G  P    + +LI GLC    + KAN     +E        
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE-------- 575

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                    V +  SL  ++      G   + Y +  ++A  G   D++++  ++    K
Sbjct: 576 -----NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALK 630

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
             +   +  LF+E++ +G++PD + Y  +I+ L + +    A   + QM  +G +P+   
Sbjct: 631 QHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVT 690

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMD 627
           +  L+   C+      A  L  + L      +  +    ++ F  +G++E A + L    
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA-KDLHSAM 749

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRG 684
            + +   +  + I + GLC+ G+++EA+++   + E       P C+    +IH LCK G
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG---FSPDCISYSTIIHELCKMG 806

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNY 710
            ++ A +++   L  G  L+P V  Y
Sbjct: 807 DINKAFELWNEMLYKG--LKPDVVAY 830



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 234/489 (47%), Gaps = 14/489 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D++R   + V    +  LI+GY K G  ++A      M +    P    Y+ ++    R
Sbjct: 396 FDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCR 455

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A+ ++ EM +     N  TF+ LING  K  K + A ++ D+M    ++PN+ T
Sbjct: 456 NGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           + ++I G C +    +A++L+ +M + G  PD   Y +L++G C    V +A   +   E
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
               V    S + L+ GLFR  R+ E Y  + +M    ++ D+V + +++    +    +
Sbjct: 576 NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            +  L  +M+E+G+ PD   Y  +I        + QA +   ++      PNT T T+LI
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLI 695

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C++G +  A+ L  +M      P+   +N  +D     G++EKA  L   M  G   
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA 755

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           ++               S   +++  C AG I +A  ++ ++ ESG  PD I+Y+++I+ 
Sbjct: 756 SI--------------VSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHE 801

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
            CK+G+IN A +L+ E+  KGL+PD V Y   I         + A  I+  M ++G  P+
Sbjct: 802 LCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 566 PAVYKSLMT 574
              Y++L++
Sbjct: 862 WDTYRALLS 870



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 241/552 (43%), Gaps = 89/552 (16%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA N A+I  L K   FD   +   E+    +      + +LI    K G  E AL  F 
Sbjct: 339 FAYN-ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM++   +  VY YN+++N   ++     A  +   MVK    P   ++S LI GL ++G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A+++  EM +RGI  N +T+T +I+G C+  + DEA RLF KM DS   P+ V +N
Sbjct: 458 DLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL------------------- 283
            ++ G+C +  + +A  L     + G  P   +Y  LI GL                   
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENS 577

Query: 284 ----------------FRAKRYDEAYA-W------------------------------- 295
                           FR  R+ E Y  W                               
Sbjct: 578 YAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKS 637

Query: 296 ---YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              +R+M E+ ++PD + Y  MI  LS+   +  A+     M   G  P+T  +  LI  
Sbjct: 638 CVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINN 697

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C  G L  A  L  E+   + LPN  T+   +      G ++ A+ L + M + G   S
Sbjct: 698 LCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLAS 756

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           +  FN LI GLCKAG++++A  L  K+ E G +P              D  S  T++ + 
Sbjct: 757 IVSFNILIKGLCKAGKIQEAIDLMRKITESGFSP--------------DCISYSTIIHEL 802

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV-GNINGALKLFKELQLKGLRPD 530
           C  G I+KA+++  ++   G  PD++ YN  I  +C V G  + AL ++  +   G++P+
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPN 861

Query: 531 SVTYGTLINGLQ 542
             TY  L++G+ 
Sbjct: 862 WDTYRALLSGIS 873



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 259/609 (42%), Gaps = 54/609 (8%)

Query: 93  NVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFL 150
           N+ V +D   +  L+ G+ ++ + E AL     M      P     + +++   +K+L  
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVE 320

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            A ++  ++  L  +PN+  ++ LI+ L K+ + + A ++  EM  RG+ PN+ TY I+I
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
             LC+    ++A  LF KM+D G       YN+L+NG+CK   +D A  LL    K+G  
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLT 440

Query: 271 PRLGSYSCLIDGLFRA-----------------------------------KRYDEAYAW 295
           P   SYS LI GL R                                    K+ DEA   
Sbjct: 441 PTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARL 500

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + KM +  + P+ V + VMI G    G ++ A +L   M E G+ PD Y Y +LI G C 
Sbjct: 501 FDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A     ++    ++ N  + T L+ G+ R G   +   L+++M   G    +  
Sbjct: 561 TSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVS 620

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           F  ++    K  + EK+ +LF +M E G  P              D      M++     
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKP--------------DDIFYTCMIDALSKE 666

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
             + +A     Q+   G  P+ +T+  LIN  CK G +  A  L KE+    + P+  TY
Sbjct: 667 ENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTY 726

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
              ++        E A  +   M Q G   S   +  L+   C+  K   A  L  +   
Sbjct: 727 NCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITE 785

Query: 595 DISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                D  S  +I  E  + G++  A +   EM +K     +  Y I++      G+  +
Sbjct: 786 SGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDK 845

Query: 654 ALNIFSVLV 662
           AL I++ ++
Sbjct: 846 ALGIYTNMI 854



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 193/412 (46%), Gaps = 15/412 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N  T S ++  L K  +  +A  + D+M Q G+  +++ YT  I   C+    D A  L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           ++M+  G     V YN L+ G CK  RV EA+ +       G      +Y  L+ G  R 
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +  + A      M      P       MI  L +   V++A  L   + + G+VP+ + Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           NALI   C     D A  L  E+  R   PN  T+ ILI  +C+ GM++DA  LF+KM  
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            G   +V  +N+LI+G CK G L++A  L   M + G  PT               AS  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT--------------AASYS 447

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            ++   C  G +  A ++  ++AE G   +  T+ +LINGFCK   ++ A +LF ++   
Sbjct: 448 PLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + P+ VT+  +I G   V     AF+++ QM + G  P    Y+SL++  C
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLC 559



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 216/466 (46%), Gaps = 22/466 (4%)

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI  N++T + ++  L +I +   A  LF KM  SG   D   Y A +  +C+ R +D A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   E +G       Y+ L+ GL +  R  EA      M    +  D V Y  ++ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +++ A+++  DM   G VP     + +I       L+++A SL  ++     +PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
              +  LI  +C+N   DDA +LF +M   G  P+   +  LI  LCK G +E A  LF 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           KM + G   T++                 +++  YC  G + +A  +L  + + G  P  
Sbjct: 398 KMRDKGIKVTVY--------------PYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            +Y+ LI G C+ G+++ A++L +E+  +G+  ++ T+  LING  +  + ++A R+F +
Sbjct: 444 ASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGE 615
           M  +   P+   +  ++   C       AF L+ Q +      D+ + +S I        
Sbjct: 504 MIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSG 563

Query: 616 VENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           V  A + + +++     LN+F L   T  L GL ++G+  E  +++
Sbjct: 564 VSKANEFVADLENSYAVLNNFSL---TALLYGLFREGRFTETYHLW 606



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 69/295 (23%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S +A++  L +   F   +   DE+    V +    F +++    K  D EK+   F +M
Sbjct: 585 SLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           KE   +PD   Y  +++   +++  + AL  + +MV     PN VT ++LIN L KSG  
Sbjct: 645 KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYL 704

Query: 185 EVAIKMLDEMTQRGILPNKFTYT----------------------------------IVI 210
             A  +  EM    +LPNKFTY                                   I+I
Sbjct: 705 GSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILI 764

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV---------------- 254
            GLC+  +  EA  L  K+ +SG SPD ++Y+ +++  CK+  +                
Sbjct: 765 KGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLK 824

Query: 255 -------------------DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                              D+AL +  +  + G  P   +Y  L+ G+     YD
Sbjct: 825 PDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 87/186 (46%), Gaps = 3/186 (1%)

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFL 611
           + G    +G T +      ++    + R+F+LA  L+ + L+     D+    + I  + 
Sbjct: 150 VLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYC 209

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           +   ++ A   ++ M+ +       PY + + GLC++ +V+EA+ + +V+V         
Sbjct: 210 ESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEV 269

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +   L++G C+   L++A+ +    ++ GF+     C++++  L   K      A+ L C
Sbjct: 270 TYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDEL--RKKELVEEAFSLAC 327

Query: 732 RMKSVG 737
           ++  +G
Sbjct: 328 KLGDLG 333


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 230/482 (47%), Gaps = 49/482 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLI G    G+ EKA E + +MK     P V+  N++L    +  L+  A  ++ E 
Sbjct: 362 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 421

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V    + NI T++++++ L K GK + A  +LD M  +G++PN  +Y  +I G C+    
Sbjct: 422 VDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480

Query: 220 DEAYRLFLKMKDSGCSPDFVAY-----------------------------------NAL 244
           D A  +F  M      P+ V Y                                   N +
Sbjct: 481 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +NG CK+ ++ EA   L++F ++GF+P   +Y+ ++DG  +    D A A YR+M E  +
Sbjct: 541 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 600

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+VV Y  +I G  ++ ++  A+K   +MRE+G+  D   Y+ALI GFC    ++ A+ 
Sbjct: 601 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 660

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +    PN   +  +I G      ++ A   + KM        +G +  LIDGL 
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           K G L  A+ L+ +M           LS+G   V D  +   +V   C  G +  A KIL
Sbjct: 721 KEGRLVFASDLYMEM-----------LSKG--IVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++      P ++ YN+LI G+ + GN+  A  L  E+  +GL PD VTY  LING  + 
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKG 827

Query: 545 DR 546
           DR
Sbjct: 828 DR 829



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 265/566 (46%), Gaps = 25/566 (4%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           + +   + K  N  +G        +R  + S A+ ++VI   +         +  +E+ +
Sbjct: 259 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 318

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
               +   V   L+ GY   G+ + AL  F K+ E    P+   Y+ ++           
Sbjct: 319 CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEK 378

Query: 152 ALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           A  +Y +M KLN +P ++   + L+ G  K+   E A K+ DE    G+  N FTY I++
Sbjct: 379 ASELYTQM-KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMM 436

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S LC+  + DEA  L   M + G  P+ V+YN ++ G C+   +D A ++          
Sbjct: 437 SWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLK 496

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P + +YS LIDG F+    ++A   + +M    I P    +  +I GL + G++ +A   
Sbjct: 497 PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L +  E G +P    YN+++ GF   G +D A ++  E+ +    PN  T+T LI G C+
Sbjct: 557 LKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFL 449
           +  +D A K  ++M + G    V  ++ALIDG CK  ++E A  LF++ +E+G +P   +
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676

Query: 450 RLSQ-GGNR---------------VHDK-----ASLQTMVEQYCTAGLIHKAYKILMQLA 488
             S   G R               ++D+      +  T+++     G +  A  + M++ 
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G +PDIIT++ L+NG C  G +  A K+ +E+  K + P  + Y TLI G  R    +
Sbjct: 737 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 796

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +AF +  +M   G  P    Y  L+ 
Sbjct: 797 EAFTLHDEMLDRGLVPDDVTYDILIN 822



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 186/744 (25%), Positives = 320/744 (43%), Gaps = 83/744 (11%)

Query: 13  DTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWA-AKRKRLRSFASNSAVIS 71
           DTV P     +   P      + +++    +PQ   R+F  A  +R  +R   +   ++ 
Sbjct: 44  DTV-PTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLH 102

Query: 72  MLLK-PNGFDLYWQTLDELRSGNVSVVSDVFFV---------------------LISGYY 109
           +L++ P       + L+   SG+ S  S V FV                     L++ Y 
Sbjct: 103 ILMRSPETHGHARKLLNRYVSGD-SDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYI 161

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           +    E A++ F  M   D  P V   N +L    R+ +      +Y +MV      +  
Sbjct: 162 RANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHF 221

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T  +++    K G+ E A +   E  +RG+  +   Y+I+I  +C+   ++    L  +M
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281

Query: 230 KDSGCSP-----------------------------------DFVAYNALLNGFCKLRRV 254
           K+ G  P                                   + V   +L+ G+C    +
Sbjct: 282 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           D AL L     +DG  P   +YS LI+G   +   ++A   Y +M    I P V     +
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +RG  +A   ++A KL  +  + G V + + YN ++   C  G +D+A SL   +  +  
Sbjct: 402 LRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           +PN  ++  +I G CR G +D A  +F+ M      P+V  ++ LIDG  K G+ EKA  
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           LF +M  +   PT F              +  T++   C  G + +A   L    E G +
Sbjct: 521 LFDQMLSLNIAPTDF--------------TFNTIINGLCKVGQMSEARDKLKNFLEEGFI 566

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P  +TYNS+++GF K GNI+ AL +++E+   G+ P+ VTY +LING  + +R + A + 
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQ 612
             +M + G       Y +L+   C+RR    A  L+ + L   +S         I  F  
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 686

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              +E A+    +M        L  YT  + GL ++G++  A +++  ++  K IV  P 
Sbjct: 687 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLS-KGIV--PD 743

Query: 673 CVK---LIHGLCKRGYLDLAMDVF 693
            +    L++GLC +G L+ A  + 
Sbjct: 744 IITFHVLVNGLCNKGQLENARKIL 767



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 268/578 (46%), Gaps = 17/578 (2%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E +   V + +  + ++I    K  +    LE   +MKE    P    + +V+     + 
Sbjct: 245 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             + AL +  EM+      N+V  + L+ G    G  + A+ + +++T+ G+ PNK TY+
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           ++I G C     ++A  L+ +MK +G  P     N+LL G+ K    +EA  L      D
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVD 423

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             V  + +Y+ ++  L +  + DEA +    M  + + P+VV Y  MI G    G +  A
Sbjct: 424 CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMA 483

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             + SDM  R + P+   Y+ LI G    G  ++A  L  ++   +  P   TF  +I G
Sbjct: 484 SSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIING 543

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
           +C+ G + +A+       + G  PS   +N+++DG  K G ++ A  ++ +M E G +P 
Sbjct: 544 LCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPN 603

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  +++  +C +  I  A K   ++ E G   D+  Y++LI+GF
Sbjct: 604 V--------------VTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGF 649

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           CK  ++  A  LF EL   GL P+ + Y ++I+G + ++  E A   + +M  +      
Sbjct: 650 CKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDL 709

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLE 625
             Y +L+    +  +   A  L+++ L      D  +   +   L  KG++ENA + L E
Sbjct: 710 GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEE 769

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           MD K     +  Y   + G  ++G +KEA  +   +++
Sbjct: 770 MDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 807



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 15/362 (4%)

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFF---------------VLISGYYKVGDCEKALES 120
           PN        L   R GN+ + S VF                +LI G +K GD EKAL+ 
Sbjct: 462 PNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDL 521

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F +M   +  P  + +N ++N   +      A       ++   +P+ +T++ +++G  K
Sbjct: 522 FDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIK 581

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G  + A+ +  EM + G+ PN  TYT +I+G C+ NR D A +   +M++ G   D  A
Sbjct: 582 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 641

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y+AL++GFCK R ++ A  L     + G  P    Y+ +I G       + A  WY+KM 
Sbjct: 642 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            ++I  D+  Y  +I GL + G++  A  L  +M  +GIVPD   ++ L+ G C+ G L+
Sbjct: 702 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 761

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            AR +  E+ +++  P+   +  LI G  R G + +A  L ++M   G  P    ++ LI
Sbjct: 762 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821

Query: 421 DG 422
           +G
Sbjct: 822 NG 823



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 133/537 (24%), Positives = 245/537 (45%), Gaps = 23/537 (4%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            F+ L+N   ++ + E AI   + M  + ++P      I+++ L + N   E   L+ KM
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              G   D    + ++    K  RV+EA    R  ++ G     G+YS +I  + +    
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +       +M E    P    +  +I      G + +A++L  +M   G   +     +L
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +KG+C  G LD A +L  +I +    PN  T+++LI G C +G ++ A +L+ +M+  G 
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 391

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PSV   N+L+ G  KA   E+A+ LF +        +F              +   M+ 
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF--------------TYNIMMS 437

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G + +A  +L  +   G +P++++YN +I G C+ GN++ A  +F ++  + L+P
Sbjct: 438 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP 497

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           + VTY  LI+G  +    E A  +F QM      P+   + +++   C+  + S A    
Sbjct: 498 NVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKL 557

Query: 590 LQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIG 644
             +L +       +  SI + F+++G +++A+    EM     +F ++P    YT  + G
Sbjct: 558 KNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM----CEFGVSPNVVTYTSLING 613

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            C+  ++  AL     + E    +   +   LI G CKR  ++ A D+F   L+ G 
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 233/535 (43%), Gaps = 34/535 (6%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D   +N LLN + +  R++ A+    +      +P +   + L+  L R     E    Y
Sbjct: 149 DHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLY 208

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM    I  D     VM+R   + G+V++A +   + +ERG+  D   Y+ +I+  C  
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
              +    L  E+ +R  +P+  TFT +I      G + +A +L  +M   G   ++ + 
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328

Query: 417 NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            +L+ G C  G L+ A  LF K+ E G  P              +K +   ++E  C +G
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFP--------------NKVTYSVLIEGCCNSG 374

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I KA ++  Q+  +G  P +   NSL+ G+ K      A KLF E    G+  +  TY 
Sbjct: 375 NIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYN 433

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-R 594
            +++ L +  + ++A  +   M   G  P+   Y  ++   CR+    +A S++   L R
Sbjct: 434 IMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR 493

Query: 595 DISGRDDESMKSIEEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           D+          I+   +KG+ E A+     +L ++    DF    +   + GLC+ GQ+
Sbjct: 494 DLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT---FNTIINGLCKVGQM 550

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            EA +     +E   I   PSC+    ++ G  K G +D A+ V+    +  F + P V 
Sbjct: 551 SEARDKLKNFLEEGFI---PSCMTYNSIVDGFIKEGNIDSALAVYREMCE--FGVSPNVV 605

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMEN 763
            Y      F K N+   A      M+  G +LD   Y    +L+ G    R+ME+
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY---SALIDGFCKRRDMES 657



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 117/223 (52%), Gaps = 2/223 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I+   K N  DL  +T DE+R   + +    +  LI G+ K  D E A + F ++ E
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTE 185
               P+  +YN++++  FR    + A  V+Y+ +  + +P ++ T++ LI+GL K G+  
Sbjct: 668 VGLSPNRIVYNSMIS-GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 726

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A  +  EM  +GI+P+  T+ ++++GLC   + + A ++  +M     +P  + YN L+
Sbjct: 727 FASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLI 786

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
            G+ +   + EA  L       G VP   +Y  LI+G F+  R
Sbjct: 787 AGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 123/251 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++   +K    D       E+    VS     +  LI+G+ K    + AL++  +M+E
Sbjct: 573 NSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE 632

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + DV  Y+A+++   +++    A  +++E++++   PN + ++ +I+G       E 
Sbjct: 633 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEA 692

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+    +M    I  +  TYT +I GL +  R   A  L+++M   G  PD + ++ L+N
Sbjct: 693 ALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN 752

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C   +++ A  +L   ++    P +  Y+ LI G FR     EA+  + +M +  + P
Sbjct: 753 GLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVP 812

Query: 307 DVVLYGVMIRG 317
           D V Y ++I G
Sbjct: 813 DDVTYDILING 823



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 80  DLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           DLY + L +       +V D+  F VL++G    G  E A +   +M   +  P V IYN
Sbjct: 730 DLYMEMLSK------GIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYN 783

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            ++   FR+     A  ++ EM+    +P+ VT+ +LING  K  ++
Sbjct: 784 TLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 830


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/659 (23%), Positives = 291/659 (44%), Gaps = 39/659 (5%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K  RL +  + + +++  +K        + LD++    +      + ++I    K+    
Sbjct: 257 KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A     +M+E +  PD   YN +++  F +    LA+ ++ +M++ +  P++ T++ LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 176 NGLSKSGKTEVAIKMLDEMT--------------------QRGILPNKFTYTIVISGLCQ 215
           +G  ++G+T+ A ++L EM                       GI P+  TY+ +I+G+C+
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCK 436

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           +    E   +  +M+ SG  P+ V Y  L+  FCK     EAL       + G V     
Sbjct: 437 MGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVI 496

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           ++ L+   +R     EA  + + M   KI  DV  +  +I    + G V +A  +  +M 
Sbjct: 497 HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 556

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             G  PD   Y +L++G C  G L QA+   V + ++    +  T   L+ G+C++G +D
Sbjct: 557 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 616

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           +A  L  KM      P    +  L+DG CK G++  A +L   M           L +G 
Sbjct: 617 EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMM-----------LEKG- 664

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQ-LAESGNLPDIITYNSLINGFCKVGNING 514
             V D  +   ++      G +  A  +  + + + G   D I YNS++NG+ K G IN 
Sbjct: 665 -LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE 723

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
             +L + +    + P S +Y  L++G  +  +      ++  M + G  P    Y+ L+ 
Sbjct: 724 IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIF 783

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             C      +A     + + + SG   +    I     K  V + I G  E+   +    
Sbjct: 784 GLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGD-IDGAFELKEDMKALG 842

Query: 635 LAPYTIW----LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           + P  +     + GLC+ G+V+EA+ +FS ++    + T  +   L+HGLCK   +D A
Sbjct: 843 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDA 901



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 223/470 (47%), Gaps = 20/470 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  +I  Y + G+  +A   +  M      PD+  Y ++L    +    + A      ++
Sbjct: 532 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 591

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +  C  +  T + L+ G+ K G  + A+ + ++M  R ILP+ +TYTI++ G C+  +  
Sbjct: 592 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIV 651

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE-KDGFVPRLGSYSCL 279
            A  L   M + G  PD +AY  LLNG     +V  A  + +    K+G      +Y+ +
Sbjct: 652 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 711

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++G  +  + +E     R M E ++ P    Y +++ G  + G++   + L  DM + GI
Sbjct: 712 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 771

Query: 340 VPDTYCYNALIKGFCDLGLLDQA-RSLQVEIWKRDSLPNTHTFTI-LICGMCRNGMVDDA 397
            PD   Y  LI G C+ GL++ A + L+  + +   L   HT  I LI   CR G +D A
Sbjct: 772 KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGA 831

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGN 456
            +L   M+  G  PS    ++++ GLCK G++E+A ++F   M  G  PT+         
Sbjct: 832 FELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI--------- 882

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKVGNINGA 515
                A+  T++   C    I  A+  L QL ES  L  D++TYN LI G C    I  A
Sbjct: 883 -----ATFTTLMHGLCKEFKIDDAFH-LKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 936

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           L L++E++ KGL P+  TY TL   +      +D  ++   +   G  PS
Sbjct: 937 LDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 986



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 283/636 (44%), Gaps = 54/636 (8%)

Query: 129 CQP-DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
           C P +++  + ++N   ++   L A A  + M +     ++ + + ++N L    K+E  
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS-PDFVAYNALLN 246
              L E   R    +  T  IV++ LC   +  +A  +  KMK+  C  P+ V YN +LN
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKN--CRLPNAVTYNTILN 272

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            + K  R   AL +L   EK+G    L +Y+ +ID L + KR   AY   ++M E  + P
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTP 332

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR--- 363
           D   Y  +I G    GK+  A+ + + M  + + P    Y ALI G+C  G  D+AR   
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 364 -SLQV------EIWKRDSL----------PNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             +Q+      E+ K   +          P+  T++ LI GMC+ GM+ + +++ ++M+K
Sbjct: 393 YEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQK 452

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLF---YKMEIGKNPTL-------FLR------ 450
           +G  P+  ++  L+   CKAG  ++A   F   Y+  +  N  +       F R      
Sbjct: 453 SGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAE 512

Query: 451 ---LSQGGNRVH---DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
                Q  +R+    D AS   +++ YC  G + +A+ +   +   G  PDI TY SL+ 
Sbjct: 513 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLR 572

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           G C+ G++  A +    L  K    D  T  TL+ G+ +    ++A  +  +M      P
Sbjct: 573 GLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILP 632

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQG 622
               Y  L+   C+R K   A  L LQ + +     D    +  +   + +G+V+ A   
Sbjct: 633 DTYTYTILLDGFCKRGKIVPALIL-LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691

Query: 623 LLEMDFKLNDF-QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
             E+  K   +     Y   + G  + GQ+ E   +   + E +   +  S   L+HG  
Sbjct: 692 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYI 751

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           K+G L   + ++   +K G  ++P    Y  R L+F
Sbjct: 752 KKGQLSRTLYLYRDMVKEG--IKPDNVTY--RLLIF 783



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G  K G  E+A+  F  +      P +  +  +++   ++  F +  A + + +  +
Sbjct: 853 IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE--FKIDDAFHLKQLMES 910

Query: 164 C--LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           C    ++VT+++LI GL        A+ + +EM  +G+LPN  TY  +   +       +
Sbjct: 911 CGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 970

Query: 222 AYRLFLKMKDSGCSPDF 238
             +L   ++D G  P +
Sbjct: 971 GEKLLKDIEDRGIVPSY 987


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 214/415 (51%), Gaps = 17/415 (4%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L + G+ +  ++    M    +    ++ TIV+ GLC+    +   +L  ++   G   
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YNA + G+ K   +     +L   EK+G    + +Y+ LI G     + +EA   +
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M E+ IE DV +Y  +I     +G VK A+ L  +M ++G++P  + Y ALI G C  
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G ++ A+ L  E+  +    N   F  LI G C +GMVD+A +L   MEK G    V  +
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 417 NALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N++  GLCK    ++A  LLF  +E G +P              +  S  T+++ YC  G
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSP--------------NTMSFTTLIDIYCKEG 484

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
              +A ++  ++ E GN+P+IITYN LI+G+ K GN+  A KL  EL+ +GL PD  T  
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 544

Query: 536 TLINGLQRVDREED-AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +LI+G + +D + D A ++F +MPQ G  P+   Y ++++   +  +   AF L+
Sbjct: 545 SLIHG-ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY 598



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 83/456 (18%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP----------- 201
           L  +  MV L+    + + +++++GL K G  E+  K++DE+  +G+             
Sbjct: 210 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEG 269

Query: 202 ------------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
                                   N  TYT++I G   I + +EA RLF +M++ G   D
Sbjct: 270 YFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEAD 329

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              Y ++++  C+   V  AL L       G +P   +Y  LI G+ +A + + A     
Sbjct: 330 VYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVN 389

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M  + I+ + V++  +I G  E+G V +A++L   M ++G+  D + YN++  G C L 
Sbjct: 390 EMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLN 449

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A+ L   + +R   PNT +FT LI   C+ G   +A+++F +ME+ G  P++  +N
Sbjct: 450 RKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYN 509

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            LIDG  K G +++A                                             
Sbjct: 510 VLIDGYSKRGNMKEA--------------------------------------------- 524

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
              +K+  +L   G +PD+ T  SLI+G C  G ++ ALKLF E+  +GL P+ VTY  +
Sbjct: 525 ---HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 581

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           I+GL +  R E+AF+++ +M + G TP   VY SL+
Sbjct: 582 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 185/327 (56%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+  +G  E+A   F +M+E   + DVY+Y ++++   R      AL ++ EM
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P+  T+  LI+G+ K+G+ E A  +++EM  +GI  N   +  +I G C+    
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA RL + M+  G   D  AYN++ +G CKL R DEA  LL S  + G  P   S++ L
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +   + EA   +R+M E+   P+++ Y V+I G S+ G +K+A KL  ++  RG+
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD Y   +LI G C  G +D A  L  E+ +R  +PN  T+T +I G+ ++G  ++A K
Sbjct: 537 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 596

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA 426
           L+++M++ G  P   ++++L+  L  A
Sbjct: 597 LYDEMKETGLTPDDTVYSSLVGSLHSA 623



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 215/500 (43%), Gaps = 92/500 (18%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLID--GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           EAL      EK GF   +   SCL+    L R  + D    ++R+M    +E  V    +
Sbjct: 173 EALEAFEHMEKKGF--HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 230

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA------------------------- 348
           ++ GL + G V+   KL+ ++  +G+  +   YNA                         
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 349 ----------LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
                     LI GF ++G +++A+ L  E+ ++    + + +T +I   CR+G V  A 
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGG 455
            LF++M   G  PS   + ALI G+CKAG++E A +L  +M+   I  NP +F       
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF------- 403

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T+++ YC +G++ +A ++ + + + G   D+  YNS+ +G CK+   + A
Sbjct: 404 ---------NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L   +  +G+ P+++++ TLI+   +     +A R+F +M + G  P+   Y  L+  
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 514

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
             +R     A  L                        K E+EN  +GL+          +
Sbjct: 515 YSKRGNMKEAHKL------------------------KDELEN--RGLIP--------DV 540

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
              T  + G C DG+V  AL +F  + +   +    +   +I GL K G  + A  ++  
Sbjct: 541 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 600

Query: 696 TLKNGFILRPRVCNYLLRSL 715
             + G      V + L+ SL
Sbjct: 601 MKETGLTPDDTVYSSLVGSL 620



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 201/486 (41%), Gaps = 26/486 (5%)

Query: 281 DGLFRA----KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           D LFR     K + EA   +  M ++    D     V +  L   G+V   ++    M  
Sbjct: 159 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 218

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             +    Y    ++ G C  G ++  R L  E+  +    N  T+   I G  +   +  
Sbjct: 219 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 278

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
             ++   MEK G   +V  +  LI G    G++E+A  LF +M E G    +++  S   
Sbjct: 279 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS--- 335

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                      ++   C +G + +A  +  ++ + G +P   TY +LI+G CK G +  A
Sbjct: 336 -----------IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 384

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L  E+Q KG+  + V + TLI+G       ++A R+   M + G       Y S+ + 
Sbjct: 385 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 444

Query: 576 SCR-RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+  RK      L+    R +S         I+ + ++G    A +   EM+ K N   
Sbjct: 445 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 504

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +  Y + + G  + G +KEA  +   L     I    +C  LIHG C  G +D+A+ +F 
Sbjct: 505 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 564

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
              + G +  P V  Y       SKD +   A+ L   MK  G   D  +Y    S L G
Sbjct: 565 EMPQRGLV--PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVY----SSLVG 618

Query: 755 PWNTRE 760
             ++ E
Sbjct: 619 SLHSAE 624



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 141/290 (48%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T++ S   ++ N +     F     +  + S  +  A+I  + K    +     ++E++ 
Sbjct: 334 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 393

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             + +   +F  LI GY + G  ++AL     M++   + DV+ YN++ +   +      
Sbjct: 394 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 453

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + + MV+    PN ++F+ LI+   K G    A ++  EM ++G +PN  TY ++I 
Sbjct: 454 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 513

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +     EA++L  ++++ G  PD     +L++G C   +VD AL L     + G VP
Sbjct: 514 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 573

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            + +Y+ +I GL +  R +EA+  Y +M E  + PD  +Y  ++  L  A
Sbjct: 574 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 214/415 (51%), Gaps = 17/415 (4%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L + G+ +  ++    M    +    ++ TIV+ GLC+    +   +L  ++   G   
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YNA + G+ K   +     +L   EK+G    + +Y+ LI G     + +EA   +
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M E+ IE DV +Y  +I     +G VK A+ L  +M ++G++P  + Y ALI G C  
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G ++ A+ L  E+  +    N   F  LI G C +GMVD+A +L   MEK G    V  +
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 417 NALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N++  GLCK    ++A  LLF  +E G +P              +  S  T+++ YC  G
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSP--------------NTMSFTTLIDIYCKEG 488

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
              +A ++  ++ E GN+P+IITYN LI+G+ K GN+  A KL  EL+ +GL PD  T  
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 548

Query: 536 TLINGLQRVDREED-AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           +LI+G + +D + D A ++F +MPQ G  P+   Y ++++   +  +   AF L+
Sbjct: 549 SLIHG-ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLY 602



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 83/456 (18%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP----------- 201
           L  +  MV L+    + + +++++GL K G  E+  K++DE+  +G+             
Sbjct: 214 LRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEG 273

Query: 202 ------------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
                                   N  TYT++I G   I + +EA RLF +M++ G   D
Sbjct: 274 YFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEAD 333

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
              Y ++++  C+   V  AL L       G +P   +Y  LI G+ +A + + A     
Sbjct: 334 VYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVN 393

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M  + I+ + V++  +I G  E+G V +A++L   M ++G+  D + YN++  G C L 
Sbjct: 394 EMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLN 453

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
             D+A+ L   + +R   PNT +FT LI   C+ G   +A+++F +ME+ G  P++  +N
Sbjct: 454 RKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYN 513

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            LIDG  K G +++A                                             
Sbjct: 514 VLIDGYSKRGNMKEA--------------------------------------------- 528

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
              +K+  +L   G +PD+ T  SLI+G C  G ++ ALKLF E+  +GL P+ VTY  +
Sbjct: 529 ---HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAM 585

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           I+GL +  R E+AF+++ +M + G TP   VY SL+
Sbjct: 586 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/329 (33%), Positives = 186/329 (56%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI G+  +G  E+A   F +M+E   + DVY+Y ++++   R      AL ++ EM
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P+  T+  LI+G+ K+G+ E A  +++EM  +GI  N   +  +I G C+    
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA RL + M+  G   D  AYN++ +G CKL R DEA  LL S  + G  P   S++ L
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   +   + EA   +R+M E+   P+++ Y V+I G S+ G +K+A KL  ++  RG+
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PD Y   +LI G C  G +D A  L  E+ +R  +PN  T+T +I G+ ++G  ++A K
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 600

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           L+++M++ G  P   ++++L+  L  A E
Sbjct: 601 LYDEMKETGLTPDDTVYSSLVGSLHSADE 629



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 215/500 (43%), Gaps = 92/500 (18%)

Query: 256 EALALLRSFEKDGFVPRLGSYSCLID--GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           EAL      EK GF   +   SCL+    L R  + D    ++R+M    +E  V    +
Sbjct: 177 EALEAFEHMEKKGF--HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTI 234

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA------------------------- 348
           ++ GL + G V+   KL+ ++  +G+  +   YNA                         
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 349 ----------LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
                     LI GF ++G +++A+ L  E+ ++    + + +T +I   CR+G V  A 
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGG 455
            LF++M   G  PS   + ALI G+CKAG++E A +L  +M+   I  NP +F       
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF------- 407

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T+++ YC +G++ +A ++ + + + G   D+  YNS+ +G CK+   + A
Sbjct: 408 ---------NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L   +  +G+ P+++++ TLI+   +     +A R+F +M + G  P+   Y  L+  
Sbjct: 459 KGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDG 518

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
             +R     A  L                        K E+EN  +GL+          +
Sbjct: 519 YSKRGNMKEAHKL------------------------KDELEN--RGLIP--------DV 544

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
              T  + G C DG+V  AL +F  + +   +    +   +I GL K G  + A  ++  
Sbjct: 545 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 604

Query: 696 TLKNGFILRPRVCNYLLRSL 715
             + G      V + L+ SL
Sbjct: 605 MKETGLTPDDTVYSSLVGSL 624



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 195/472 (41%), Gaps = 22/472 (4%)

Query: 281 DGLFRA----KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           D LFR     K + EA   +  M ++    D     V +  L   G+V   ++    M  
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVN 222

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
             +    Y    ++ G C  G ++  R L  E+  +    N  T+   I G  +   +  
Sbjct: 223 LDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGG 282

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
             ++   MEK G   +V  +  LI G    G++E+A  LF +M E G    +++  S   
Sbjct: 283 VAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS--- 339

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                      ++   C +G + +A  +  ++ + G +P   TY +LI+G CK G +  A
Sbjct: 340 -----------IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             L  E+Q KG+  + V + TLI+G       ++A R+   M + G       Y S+ + 
Sbjct: 389 QMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASG 448

Query: 576 SCR-RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
            C+  RK      L+    R +S         I+ + ++G    A +   EM+ K N   
Sbjct: 449 LCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN 508

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +  Y + + G  + G +KEA  +   L     I    +C  LIHG C  G +D+A+ +F 
Sbjct: 509 IITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFD 568

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYP 746
              + G +  P V  Y       SKD +   A+ L   MK  G   D  +Y 
Sbjct: 569 EMPQRGLV--PNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYS 618



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 141/290 (48%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T++ S   ++ N +     F     +  + S  +  A+I  + K    +     ++E++ 
Sbjct: 338 TSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQG 397

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             + +   +F  LI GY + G  ++AL     M++   + DV+ YN++ +   +      
Sbjct: 398 KGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDE 457

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + + MV+    PN ++F+ LI+   K G    A ++  EM ++G +PN  TY ++I 
Sbjct: 458 AKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLID 517

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +     EA++L  ++++ G  PD     +L++G C   +VD AL L     + G VP
Sbjct: 518 GYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVP 577

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            + +Y+ +I GL +  R +EA+  Y +M E  + PD  +Y  ++  L  A
Sbjct: 578 NVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 174/715 (24%), Positives = 305/715 (42%), Gaps = 19/715 (2%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSG 92
           V   +     P      F  AA++ R+    ++   +  L++ +G      +  D ++  
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQ 244

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            V      F  +  G    G    A  +   MKE     + Y YN ++    +      A
Sbjct: 245 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 304

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L VY  M+    +P++ T+S+L+    K    E  + +L EM   G+ PN ++YTI I  
Sbjct: 305 LEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 364

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L Q  R DEAYR+  KM++ GC PD + +  L+   C   R+ +A  +    +K    P 
Sbjct: 365 LGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 424

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y  L+D              +  M  +    +VV Y  +I  L + G+V +A+++  
Sbjct: 425 RVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 484

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+++GIVP+ Y YN+LI GF        A  L   +      PN +T  + I    ++G
Sbjct: 485 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSG 544

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
               A + +  M+  G  P V   NA++ GL K+G L  A  +F++++ +G +P      
Sbjct: 545 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP------ 598

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +   M++    A    +A KI   + E+  +PD++  NSLI+   K G 
Sbjct: 599 --------DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGR 650

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A ++F +L+   L P   TY TL+ GL R  + ++   +  +M  +   P+   Y +
Sbjct: 651 GDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 710

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           ++   C+    + A  +           D  S  ++   L K E  N    +     K+ 
Sbjct: 711 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 770

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               A     L    + G +KEAL+I     ++  +     SC  L+ G+ K+  ++ ++
Sbjct: 771 IPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSI 830

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +       +G  L       L++ L   K  K + A+ L+ + KS G  L   LY
Sbjct: 831 EFAEIIASSGITLDDFFLCPLIKHL--CKQKKALEAHELVKKFKSFGVSLKTGLY 883



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 274/600 (45%), Gaps = 24/600 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+  + K  D E  L    +M+    +P+VY Y   + +  + + F  A  +  +M
Sbjct: 322 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKM 381

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+++T ++LI  L  +G+   A  +  +M +    P++ TY  ++        +
Sbjct: 382 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 441

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                ++  MK  G + + VAY A+++  C++ RV EAL +    ++ G VP   SY+ L
Sbjct: 442 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 501

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +A R+ +A   ++ M     +P+   + + I    ++G+   A++    M+ +GI
Sbjct: 502 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 561

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD    NA++ G    G L  A+ +  E+      P+T T+T++I    +    D+A K
Sbjct: 562 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 621

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F  M +  C P V   N+LID L KAG  ++A  +FY++ E+   PT            
Sbjct: 622 IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPT------------ 669

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T++      G + +   +L ++  S   P++ITYN++++  CK G +N AL +
Sbjct: 670 --DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM 727

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +  KG  PD  +Y T+I GL + +R  +AF IF QM +    P  A   +++    +
Sbjct: 728 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVK 786

Query: 579 RRKFSLAFSLWLQYLRDISGRDDES--MKSIEEFLQKGEVENAIQG---LLEMDFKLNDF 633
                 A  +   Y      + D S     +E  L+K  +E +I+    +      L+DF
Sbjct: 787 IGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDF 846

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L P    +  LC+  +  EA  +          +       LI GL     +D+A  +F
Sbjct: 847 FLCPL---IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLF 903



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 254/544 (46%), Gaps = 46/544 (8%)

Query: 97   VSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
            V DV  V  LI   YK G  ++A   F ++KE + +P    YN +L    R+      + 
Sbjct: 632  VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 691

Query: 155  VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
            +  EM   N  PN++T++ +++ L K+G    A+ ML  MT +G +P+  +Y  VI GL 
Sbjct: 692  LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 751

Query: 215  QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRL 273
            +  R +EA+ +F +MK     PD+     +L  F K+  + EAL +++  F + G     
Sbjct: 752  KEERYNEAFSIFCQMKKV-LIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDR 810

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             S   L++G+ +    +++  +   +    I  D      +I+ L +  K  +A +L+  
Sbjct: 811  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKK 870

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
             +  G+   T  YN+LI G  D  L+D A  L  E+ +    P+  T+ +L+  M ++  
Sbjct: 871  FKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMR 930

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT------ 446
            +++  K+  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT      
Sbjct: 931  IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGP 990

Query: 447  LFLRLSQGGNRVHDKASL-QTMVEQYCTA---------------GLIHKAYKILMQLAES 490
            L   L + G R+ D  +L   M+E  C A               G   K   +   + + 
Sbjct: 991  LLDGLLKAG-RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 1049

Query: 491  GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
            G  PDI +Y  +I+  CK G +N  L  F++L   GL PD +TY  LI+GL +  R E+A
Sbjct: 1050 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1109

Query: 551  FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
              +F +M + G  P+   Y SL+    +                  +G+  E+ K  EE 
Sbjct: 1110 VSLFNEMQKKGIVPNLYTYNSLILHLGK------------------AGKAAEAGKMYEEL 1151

Query: 611  LQKG 614
            L KG
Sbjct: 1152 LTKG 1155



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 172/753 (22%), Positives = 305/753 (40%), Gaps = 127/753 (16%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +AVI  L +        +  DE++   +      +  LISG+ K      ALE F  M  
Sbjct: 464  TAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDI 523

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               +P+ Y +   +N   +    + A+  Y  M     +P++V  + ++ GL+KSG+  +
Sbjct: 524  HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGM 583

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++  E+   G+ P+  TYT++I    + ++ DEA ++F  M ++ C PD +A N+L++
Sbjct: 584  AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLID 643

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  R DEA  +    ++    P  G+Y+ L+ GL R  +  E      +M+     P
Sbjct: 644  TLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 703

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG-------------- 352
            +++ Y  ++  L + G V DA+ +L  M  +G +PD   YN +I G              
Sbjct: 704  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 763

Query: 353  --------------------FCDLGLLDQA--------------------RSLQVEIWKR 372
                                F  +GL+ +A                     SL   I K+
Sbjct: 764  CQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKK 823

Query: 373  DSLPNTHTFTILICG----------------MCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
              +  +  F  +I                  +C+     +A +L  K +  G     G++
Sbjct: 824  AGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLY 883

Query: 417  NALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            N+LI GL     ++ A  LF +M E+G  P              D+ +   +++    + 
Sbjct: 884  NSLICGLVDENLIDIAEGLFAEMKELGCGP--------------DEFTYNLLLDAMGKSM 929

Query: 476  LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
             I +  K+  ++   G     +TYN++I+G  K   +  A+ L+  L  +G  P   TYG
Sbjct: 930  RIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 989

Query: 536  TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             L++GL +  R EDA  +F +M + GC  +  +Y  L+                      
Sbjct: 990  PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNG------------------HR 1031

Query: 596  ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
            I+G  ++     ++ + +G         +  D K        YTI +  LC+ GQ+ + L
Sbjct: 1032 IAGNTEKVCHLFQDMVDQG---------INPDIK-------SYTIIIDTLCKAGQLNDGL 1075

Query: 656  NIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
              F  L+E   +   P  +    LI GL K   L+ A+ +F    K G +  P +  Y  
Sbjct: 1076 TYFRQLLE---MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV--PNLYTYNS 1130

Query: 713  RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              L   K  K   A  +   + + G+  +   Y
Sbjct: 1131 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1163



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 243/544 (44%), Gaps = 52/544 (9%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +++I  L K    D  W+   +L+  N+      +  L++G  + G  ++ +    +M  
Sbjct: 639  NSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYH 698

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             +  P++  YN +L+   +      AL + Y M    C+P++ +++ +I GL K  +   
Sbjct: 699  SNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNE 758

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL----FLK-------------- 228
            A  +  +M ++ ++P+  T   ++    +I    EA  +    FL+              
Sbjct: 759  AFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLM 817

Query: 229  ------------------MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
                              +  SG + D      L+   CK ++  EA  L++ F+  G  
Sbjct: 818  EGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVS 877

Query: 271  PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             + G Y+ LI GL      D A   + +M E    PD   Y +++  + ++ ++++ +K+
Sbjct: 878  LKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV 937

Query: 331  LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
              +M  +G       YN +I G      L+QA  L   +  +   P   T+  L+ G+ +
Sbjct: 938  QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 997

Query: 391  NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
             G ++DA+ LFN+M + GC  +  ++N L++G   AG  EK   LF  M + G NP    
Sbjct: 998  AGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP---- 1053

Query: 450  RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                      D  S   +++  C AG ++       QL E G  PD+ITYN LI+G  K 
Sbjct: 1054 ----------DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKS 1103

Query: 510  GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
              +  A+ LF E+Q KG+ P+  TY +LI  L +  +  +A +++ ++   G  P+   Y
Sbjct: 1104 KRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTY 1163

Query: 570  KSLM 573
             +L+
Sbjct: 1164 NALI 1167



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 169/329 (51%)

Query: 84   QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            + + + +S  VS+ + ++  LI G       + A   F +MKE  C PD + YN +L+  
Sbjct: 866  ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 925

Query: 144  FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +       L V  EM +       VT++ +I+GL KS + E AI +   +  +G  P  
Sbjct: 926  GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985

Query: 204  FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             TY  ++ GL +  R ++A  LF +M + GC  +   YN LLNG       ++   L + 
Sbjct: 986  CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045

Query: 264  FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
                G  P + SY+ +ID L +A + ++   ++R++ E  +EPD++ Y ++I GL ++ +
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1105

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            +++A+ L ++M+++GIVP+ Y YN+LI      G   +A  +  E+  +   PN  T+  
Sbjct: 1106 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1165

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            LI G   +G  D A   + +M   GC P+
Sbjct: 1166 LIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 190/381 (49%), Gaps = 4/381 (1%)

Query: 64   ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESF 121
            +S  +++  +LK  G +   +  + + S  +++  D FF+  LI    K     +A E  
Sbjct: 811  SSCHSLMEGILKKAGIEKSIEFAEIIASSGITL--DDFFLCPLIKHLCKQKKALEAHELV 868

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             K K F       +YN+++     + L  +A  ++ EM +L C P+  T++LL++ + KS
Sbjct: 869  KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 928

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
             + E  +K+ +EM ++G      TY  +ISGL +  R ++A  L+  +   G SP    Y
Sbjct: 929  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 988

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
              LL+G  K  R+++A  L     + G       Y+ L++G   A   ++    ++ M +
Sbjct: 989  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1048

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            + I PD+  Y ++I  L +AG++ D +     + E G+ PD   YN LI G      L++
Sbjct: 1049 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1108

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            A SL  E+ K+  +PN +T+  LI  + + G   +A K++ ++   G  P+V  +NALI 
Sbjct: 1109 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1168

Query: 422  GLCKAGELEKANLLFYKMEIG 442
            G   +G  + A   + +M +G
Sbjct: 1169 GYSVSGSTDSAYAAYGRMIVG 1189


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 257/592 (43%), Gaps = 85/592 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL+ +++MV +N LP    F+ L   + K       I ++  +   GI P+ +T TI+I+
Sbjct: 55  ALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIIN 114

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC +N     + +   M   G  P  V +  L+NG C    V  A     S E  G   
Sbjct: 115 CLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQS 174

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL-YGVMIRGLSEAGKVKDAMKL 330
              +Y  +I+GL +A     A  +  K+     + DVV+ Y  ++  L + G V +A+ L
Sbjct: 175 NSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNL 234

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
            S M  +GI PD   YN+LI G C+ G   +A +L   + ++  +PN  TF +L+   C+
Sbjct: 235 FSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCK 294

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           +GM+  A+ +   M   G  P V  +N++I G C                          
Sbjct: 295 DGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHC-------------------------L 329

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           LSQ G+                       A K+   +   G LP+++TY+SLI+G+CK  
Sbjct: 330 LSQMGD-----------------------AVKVFELMIHKGFLPNLVTYSSLIHGWCKTK 366

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           NIN AL L  E+   GL PD VT+ TLI G  +  + E A  +F  M ++   P+     
Sbjct: 367 NINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCA 426

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            ++    + +  S A SL+         R+ E                      +M+ +L
Sbjct: 427 IILDGLFKCQFHSEAISLF---------REME----------------------KMNLEL 455

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
           N   +  Y I L G+C  G++ +A  +FS L      +   +   +I GLCK G LD A 
Sbjct: 456 N---VVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
           ++ +   +NG +      N  +R LL   D  +   Y LL  MK  G   DA
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLL--MKGKGLSADA 562



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 208/464 (44%), Gaps = 32/464 (6%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           +PDVY    ++N        +   +V   M K+   P +VTF+ LINGL   G    A +
Sbjct: 103 KPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV-AYNALLNGF 248
             D +   G   N +TY  +I+GLC+      A     K+K   C  D V AY+ +++  
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK   V EAL L       G  P L +Y+ LI GL    R+ EA      M  + I P+V
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             + V++    + G +  A  ++  M   G+ PD   YN++I G C L  +  A  +   
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +  +  LPN  T++ LI G C+   ++ A  L  +M  +G  P V  ++ LI G CKAG+
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402

Query: 429 LEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL-------IHKA 480
            E A  LF  M E  ++P L                      Q C   L        H  
Sbjct: 403 PEAAKELFCTMHEHDQHPNL----------------------QTCAIILDGLFKCQFHSE 440

Query: 481 YKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              L +  E  NL  +++ YN +++G C  G +N A +LF  L  KG++ D V Y T+I 
Sbjct: 441 AISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIK 500

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           GL +    +DA  +  +M +NGC P+   Y   +    +R   S
Sbjct: 501 GLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDIS 544



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 17/459 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI+G    G+  +A      +++   Q + Y Y A++N    K        +Y E 
Sbjct: 143 TFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIIN-GLCKAGDTSGAILYLEK 201

Query: 160 VK-LNC-LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +K  NC L  ++ +S +++ L K G    A+ +   MT +GI P+   Y  +I GLC   
Sbjct: 202 IKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFG 261

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R  EA  L   M   G  P+   +N L++ FCK   +  A  ++      G  P + +Y+
Sbjct: 262 RWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYN 321

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            +I G     +  +A   +  M  +   P++V Y  +I G  +   +  A+ LL +M   
Sbjct: 322 SVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNS 381

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ PD   ++ LI GFC  G  + A+ L   + + D  PN  T  I++ G+ +     +A
Sbjct: 382 GLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEA 441

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF +MEK     +V ++N ++DG+C  G+L  A  LF  +     P+  +++      
Sbjct: 442 ISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCL-----PSKGIKI------ 490

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  TM++  C  GL+  A  +LM++ E+G LP+  TYN  + G  +  +I+ + K
Sbjct: 491 --DVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTK 548

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
               ++ KGL  D+ T   LI+     ++E  A  +F Q
Sbjct: 549 YLLLMKGKGLSADATTTELLISYFS-ANKENSALHVFLQ 586


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 271/603 (44%), Gaps = 29/603 (4%)

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVT 170
           G    A ++F ++      P +   N ++          LA  V+ EM   N + P++ T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++++I  L ++G+ + A  ML E+ + GI P   TY +++  LC+  R +EA++L  +M 
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           +    P  V +  L+NG  + +R  E  A+L+  E  G  P    Y+ LI    R     
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA   + +M  + I+  VV Y ++ + L + G+++ A ++L +M   G+      +N+++
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 351 K-GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
                  G LD    L  E+  R   PN    T  I  +C+ G  ++A +++  +   G 
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM--------EIGKNPTLFLRLSQGGNRVHDK 461
             ++   NALI GLC+   +++A  +   M         I  N  + ++     +++ + 
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYN--IMIQFCCKASKMEEA 516

Query: 462 ASLQ----------------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             L+                T +  YC  G +     +L Q+   G  PDI+TY ++I+G
Sbjct: 517 IQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDG 576

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +CK  +++ A K   EL   GLRP++V Y  LI G  R     DA  +   M  NG  P+
Sbjct: 577 YCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPT 636

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
           P  Y SLM W C       A  ++ Q  L++I          I+ F + G+++ A+    
Sbjct: 637 PITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFK 696

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           EM ++        YT  +   C+ G  +EA  +F  +V    +    S   LI G C+  
Sbjct: 697 EMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVD 756

Query: 685 YLD 687
            LD
Sbjct: 757 SLD 759



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 244/560 (43%), Gaps = 61/560 (10%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
            DL  +   E+R GN +V  DV+   V+I    + G+ + A     +++    QP V  Y
Sbjct: 196 LDLARKVFGEMRDGN-AVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTY 254

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +++   R      A  +   MV+    P+IVTF +LINGL++  +      +L EM  
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK------ 250
            GI PN+  Y  +I   C+     EA RLF +M   G     V YN +    CK      
Sbjct: 315 FGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 374

Query: 251 ---------------------------LR---RVDEALALLRSFEKDGFVPRLGSYSCLI 280
                                      LR   R+D  L L+R        P     +  I
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACI 434

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L +  +++EA   +  +  + +  ++     +I GL +   +K+A K+L  M + G+ 
Sbjct: 435 QELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVE 494

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
            D   YN +I+  C    +++A  L+ ++ KR   P+  TF   +   C  G V+D   L
Sbjct: 495 FDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHL 554

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN---LLFYKMEIGKNPTLFLRLSQGGNR 457
            ++M+  G  P +  +  +IDG CKA ++ KAN   +   K  +  N  ++  L  G  R
Sbjct: 555 LDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGR 614

Query: 458 ---VHDK-ASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDIIT 498
              + D    L TM                   C AGL+ +A +I  Q         +I 
Sbjct: 615 NGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIG 674

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           Y  +I GFCK+G I+ A+  FKE+  + +RP+ +TY TL+    +   +E+AF++F +M 
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734

Query: 559 QNGCTPSPAVYKSLMTWSCR 578
            +G  P    Y +L++  C 
Sbjct: 735 SSGIVPDTVSYNTLISGCCE 754



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 225/489 (46%), Gaps = 15/489 (3%)

Query: 59  RLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKA 117
           RLR S  +   +I+ L +   F      L E+    ++    ++  LI  + + G C +A
Sbjct: 281 RLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF-SLLIN 176
           L  F +M     +  V  YN +     ++     A  +  EM+      +   F S++  
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L  +G+ +V ++++ EM  R + PN    T  I  LC+  + +EA  ++  +   G   
Sbjct: 401 HLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGV 460

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +    NAL++G C+   + EA  +L++    G      +Y+ +I    +A + +EA    
Sbjct: 461 NIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLR 520

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
             M +   +PD+  +   +R     GKV+D + LL  M+  G+ PD   Y  +I G+C  
Sbjct: 521 DDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKA 580

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             + +A    +E+ K    PN   +  LI G  RNG + DA  + + M+  G  P+   +
Sbjct: 581 KDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITY 640

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N+L+  +C AG +E+A  +F +  I KN  L +                 +++ +C  G 
Sbjct: 641 NSLMYWMCHAGLVEEAKEIFAQC-ILKNIELGV------------IGYTIIIQGFCKIGK 687

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           I +A     ++      P+ +TY +L+  +CK GN   A KLF E+   G+ PD+V+Y T
Sbjct: 688 IDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNT 747

Query: 537 LINGLQRVD 545
           LI+G   VD
Sbjct: 748 LISGCCEVD 756



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 36/421 (8%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
             R F     +   ++  + + +   L K    +   Q LDE+    ++V   +F  +++
Sbjct: 340 ALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVA 399

Query: 107 GYYK-VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL 165
            + +  G  +  L    +M     +P+  +  A +    ++     A  +++ ++     
Sbjct: 400 WHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG 459

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
            NI T + LI+GL +    + A K+L  M   G+  ++ TY I+I   C+ ++ +EA +L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M   G  PD   +N  L  +C L +V++ L LL   + +G  P + +Y  +IDG  +
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           AK   +A  +  ++ +  + P+ V+Y  +I G    G + DA+ +L  M+  GI P    
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639

Query: 346 YNAL-----------------------------------IKGFCDLGLLDQARSLQVEIW 370
           YN+L                                   I+GFC +G +D+A     E+ 
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMH 699

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            RD  PN  T+T L+   C+ G  ++A KLF++M  +G  P    +N LI G C+   L+
Sbjct: 700 YRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLD 759

Query: 431 K 431
           K
Sbjct: 760 K 760



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 157/359 (43%), Gaps = 22/359 (6%)

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +  A   F ++   G  PS+   N L++ L   G+L+ A  +F +M            
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM------------ 206

Query: 452 SQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
            + GN V  D  +   M++  C AG I  A+ +L +L  SG  P ++TYN L++  C+ G
Sbjct: 207 -RDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSG 265

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +  A +L   +    LRP  VT+G LINGL R  R  +   +  +M   G TP+  +Y 
Sbjct: 266 RVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYN 325

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFK 629
            L+ W CR    S A  L+ + +     +   +   I + L ++GE+E+A Q L EM   
Sbjct: 326 QLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLA 385

Query: 630 LNDFQLAPY-TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYL 686
                 + + ++    L   G++   L +   +V     + P   V    I  LCKRG  
Sbjct: 386 GMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMV--ARFLKPNDAVMTACIQELCKRGKH 443

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           + A +++   L  G  +     N L+  L   + N    A  +L  M   G + D   Y
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGL--CQGNNMKEATKVLKAMVDSGVEFDRITY 500



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 102/235 (43%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F   +  Y  +G  E  L    +MK    +PD+  Y  +++   + +    A     E+
Sbjct: 534 TFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL 593

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +K    PN V ++ LI G  ++G    AI +LD M   GI P   TY  ++  +C     
Sbjct: 594 IKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLV 653

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  +F +          + Y  ++ GFCK+ ++DEA+   +        P   +Y+ L
Sbjct: 654 EEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTL 713

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +    +    +EA+  + +M    I PD V Y  +I G  E   +   ++  ++M
Sbjct: 714 MYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 222/481 (46%), Gaps = 56/481 (11%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM---- 159
           L++G  + G+  +  E   KM E D QP+V  +  ++N   + +    AL V  +M    
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370

Query: 160 ----VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLC 214
               + ++  P++V ++ LI+GL K G+ +  + +++ M +Q+G  P+  TY  +I G C
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +    ++   LF +M   G +P+ V  N L+ G C+  RV  A+      ++ G      
Sbjct: 431 KAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAV 490

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LI+       +++A   + +M +    PD ++Y  +I G S+AG++ DA  +L+++
Sbjct: 491 TYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL 550

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           ++ GI PDT CYN LI GFC      +   +  E+ +    P+T T+  LI    +NG +
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
             AQK+  KM KAG  P+V  + A+I+  C  G   +A  +F  M+              
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMK-------------- 656

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                                            A S   P+ + YN LIN  CK   +  
Sbjct: 657 ---------------------------------AASKVPPNTVIYNILINSLCKNNKVKS 683

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L +++++ G+ P++ TY  +  GL+     E  F    +M ++ C P     + L  
Sbjct: 684 AVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTE 743

Query: 575 W 575
           W
Sbjct: 744 W 744



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 231/475 (48%), Gaps = 26/475 (5%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++ EM+KL  +      + L+ GL++ G      +++++M +  I PN  T+ I+I+ +C
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351

Query: 215 QINRADEAYRLFLKM---KDSG-----CSPDFVAYNALLNGFCKLRRVDEALALL-RSFE 265
           +  R D+A  +  KM   K+SG       PD V YN L++G CK+ R  E L L+ R   
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P   +Y+CLIDG  +A   ++    + +M +E + P+VV    ++ G+   G+V 
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVS 471

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A+    + + RG+  D   Y ALI  FC++   ++A  L  E+ K    P+   +  LI
Sbjct: 472 SAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKN 444
            G  + G + DA  +  +++K G  P    +N LI G C+  +  +   +  +ME  G  
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  +  T++      G +  A K++ ++ ++G +P + TY ++IN
Sbjct: 592 P--------------DTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVIN 637

Query: 505 GFCKVGNINGALKLFKELQLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            +C  GN N A+++FK+++    + P++V Y  LIN L + ++ + A  +   M   G T
Sbjct: 638 AYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVT 697

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVE 617
           P+   Y ++       +     F    + +      D  +M+ + E+L   GE+E
Sbjct: 698 PNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 275/633 (43%), Gaps = 72/633 (11%)

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVK-LNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           Y + A+  +AF +      L+  Y+  K LN    +   S L+    +S   E ++ + +
Sbjct: 122 YTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAASFLLRASGRSELVEESLILFN 181

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM----KDSGCSPDFVAYNALLNGF 248
           ++     + N +   + +S L +  R  +A ++  +M     DS C P+    + L +  
Sbjct: 182 DLDPS--VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFL 239

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            K  R +E   LL   E    V + G +  LI   +                        
Sbjct: 240 LKRERNEE---LLSEDEIVNLVLKFGEHGVLISSFW------------------------ 272

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
              G +I  L    K      L ++M + G V ++   N+L+ G    G  ++   L  +
Sbjct: 273 --MGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEK 330

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM----EKAGCF----PSVGMFNALI 420
           + + D  PN  TF ILI  MC+   VDDA ++  KM    E  G      P V ++N LI
Sbjct: 331 MVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI 390

Query: 421 DGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           DGLCK G  ++   L  +M            SQ G    D  +   +++ +C AG I K 
Sbjct: 391 DGLCKVGRQQEGLGLMERMR-----------SQKGC-APDTITYNCLIDGFCKAGEIEKG 438

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            ++  ++ + G  P+++T N+L+ G C+ G ++ A+  F E Q +G++ D+VTY  LIN 
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
              V+  E A  +F +M ++GC+P   VY +L++   +  + + A S  L  L+ +  R 
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADA-SFVLAELKKLGIRP 557

Query: 601 DESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL----CQDGQVKEA 654
           D    +  I  F +  +     + L EM+    +  L P TI    L     ++G +K A
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEME----EAGLKPDTITYNTLIAYASKNGDLKFA 613

Query: 655 LNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR--VCNYLL 712
             +   +++   + T  +   +I+  C  G  + AM++F   +K    + P   + N L+
Sbjct: 614 QKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIF-KDMKAASKVPPNTVIYNILI 672

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            SL   K+NK   A  L+  MK  G   +   Y
Sbjct: 673 NSL--CKNNKVKSAVSLMEDMKIWGVTPNTTTY 703



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 174/384 (45%), Gaps = 45/384 (11%)

Query: 91  SGNVSVVSD----VFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYNAVLNIAFR 145
           SG +SV  +    ++  LI G  KVG  ++ L    +M+ +  C PD   YN +++   +
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                    ++ EM K    PN+VT + L+ G+ ++G+   A+    E  +RG+  +  T
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT +I+  C +N  ++A  LF +M  SGCSPD + Y  L++GF +  R+ +A  +L   +
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           K G  P    Y+ LI G  R  ++   +   ++M E  ++PD + Y  +I   S+ G +K
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 326 DAMKLLSDMRERGIVP---------DTYC---------------------------YNAL 349
            A K++  M + G+VP         + YC                           YN L
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671

Query: 350 IKGFCDLGLLDQARSL--QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           I   C    +  A SL   ++IW     PNT T+  +  G+     ++   +  ++M + 
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIW--GVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEH 729

Query: 408 GCFPSVGMFNALIDGLCKAGELEK 431
            C P       L + L   GE+E+
Sbjct: 730 ACNPDYITMEILTEWLSAVGEIER 753



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 1/301 (0%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+   + +T        FF+ A +R       + +A+I+     N F+   +  +E+   
Sbjct: 459 TLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS 518

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
             S  + V++ LISG+ + G    A     ++K+   +PD   YN ++    R   F   
Sbjct: 519 GCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRV 578

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             +  EM +    P+ +T++ LI   SK+G  + A K++ +M + G++P   TY  VI+ 
Sbjct: 579 FEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINA 638

Query: 213 LCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            C     +EA  +F  MK  S   P+ V YN L+N  CK  +V  A++L+   +  G  P
Sbjct: 639 YCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTP 698

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ +  GL   K  ++ + +  +M E    PD +   ++   LS  G+++   K +
Sbjct: 699 NTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFV 758

Query: 332 S 332
           +
Sbjct: 759 A 759


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 228/480 (47%), Gaps = 15/480 (3%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP--NI 168
           VG       +FG +     +PD + +N V+          +ALA+   M +    P  + 
Sbjct: 135 VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDA 194

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            +++++I GL +SGK   A+K+ DEM   G+ PN+ TY  +I G  +    +  +RL  +
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ 254

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   G  P+ V YN LL+G C+  R+DE  AL+        +P   +YS L DGL R   
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
                + + +  ++ +        +++ GL + GKV  A ++   +   G+VP T  YN 
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C +  L  A  +  ++  R   P+  T+  LI G+C+  MV  A+ L  +MEK+G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             PSV  FN LID    AG+LEK   +   M+            Q G +  D  S  ++V
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ------------QKGIK-SDVISFGSVV 481

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +C  G I +A  IL  +      P+   YNS+I+ + + G+   AL L ++++  G+ 
Sbjct: 482 KAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVS 541

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
              VTY  L+ GL R  + ++A  +   +   G  P    Y ++++  C +     A  L
Sbjct: 542 ASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALEL 601



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 229/505 (45%), Gaps = 54/505 (10%)

Query: 104 LISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           ++      GD + AL    +M   E    PD + YN V+   +R      AL V+ EMV 
Sbjct: 163 VVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           +   PN +T++ +I+G  K G  E   ++ D+M   G  PN  TY +++SGLC+  R DE
Sbjct: 223 MGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDE 282

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC--L 279
              L  +M      PD   Y+ L +G  +       L+L     K G +  LG+Y+C  L
Sbjct: 283 TRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM--LGAYTCSIL 340

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL +  +  +A   +  +    + P  V+Y  +I G  +   ++ A  +   M+ R I
Sbjct: 341 LNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI-----------C-- 386
            PD   YNALI G C L ++ +A  L +E+ K    P+  TF  LI           C  
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 387 ----------------------GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
                                   C+NG + +A  + + M      P+  ++N++ID   
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           ++G+ E+A LL  KM   KN  +   +           +   +++  C +  I +A +++
Sbjct: 521 ESGDTEQALLLVEKM---KNSGVSASI----------VTYNLLLKGLCRSSQIDEAEELI 567

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             L   G  PD+++YN++I+  C  G+ + AL+L +E+   G+RP   T  TL++ L   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVY 569
            R  D   ++ QM      PS ++Y
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIY 652



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 244/501 (48%), Gaps = 16/501 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F+ N  +  +     G D   +  DE+    V+     +  +I G+ K GD E      
Sbjct: 194 AFSYNVVIAGLWRSGKGSD-ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M     +P+V  YN +L+   R        A+  EM   + LP+  T+S+L +GL+++
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G+++  + +  E  ++G++   +T +I+++GLC+  +  +A ++F  +  +G  P  V Y
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+NG+C++R +  A  +    +     P   +Y+ LI+GL + +   +A     +M +
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             ++P V  +  +I     AG+++    +LSDM+++GI  D   + +++K FC  G + +
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A ++  ++  +D  PN   +  +I     +G  + A  L  KM+ +G   S+  +N L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLK 552

Query: 422 GLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLC++ ++++A  L Y +   G  P              D  S  T++   C  G   KA
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRP--------------DVVSYNTIISACCNKGDTDKA 598

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            ++L ++ + G  P + T ++L++     G ++    L++++  K + P S  YG +++ 
Sbjct: 599 LELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658

Query: 541 LQRVDREEDAFRIFGQMPQNG 561
             R + +     +  +M + G
Sbjct: 659 YVRCENDSKVASLKKEMSEKG 679



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 216/454 (47%), Gaps = 19/454 (4%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           GF L  Q L +    NV      + VL+SG  + G  ++      +M      PD + Y+
Sbjct: 248 GFRLRDQMLHDGPKPNVVT----YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYS 303

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            + +   R       L+++ E +K   +    T S+L+NGL K GK   A ++ + +   
Sbjct: 304 ILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHT 363

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G++P    Y  +I+G CQ+     A+ +F +MK     PD + YNAL+NG CKL  V +A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   EK G  P + +++ LID    A + ++ +     M ++ I+ DV+ +G +++ 
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+ +A+ +L DM  + + P+   YN++I  + + G  +QA  L  ++       +
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSAS 543

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ +L+ G+CR+  +D+A++L   +   G  P V  +N +I   C  G+ +KA  L  
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M + G  PTL               +  T+V    +AG +H    +  Q+      P  
Sbjct: 604 EMNKYGIRPTL--------------RTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 649

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
             Y  +++ + +  N +    L KE+  KG+  D
Sbjct: 650 SIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 228/520 (43%), Gaps = 18/520 (3%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           LP+  +  +++  L  + R  +    F  +  +G  PD  A+N ++        +D ALA
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 260 LLRSFEKDGFVPRLG--SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           +LR   +    P     SY+ +I GL+R+ +  +A   + +M +  + P+ + Y  MI G
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G ++   +L   M   G  P+   YN L+ G C  G +D+ R+L  E+     LP+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T++IL  G+ R G       LF +  K G        + L++GLCK G++ KA  +F 
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +   G  PT  +                T++  YC    +  A+ I  Q+      PD 
Sbjct: 359 MLVHTGLVPTTVI--------------YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH 404

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITYN+LING CK+  +  A  L  E++  G+ P   T+ TLI+      + E  F +   
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGE 615
           M Q G       + S++   C+  K   A ++    + +D++         I+ +++ G+
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            E A+  + +M        +  Y + L GLC+  Q+ EA  +   L          S   
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           +I   C +G  D A+++     K G     R C+ L+ +L
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 158/348 (45%)

Query: 38  IMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV 97
           + +T   Q     F  + K+  +    + S +++ L K        Q  + L    +   
Sbjct: 309 LTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT 368

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           + ++  LI+GY +V D   A   F +MK    +PD   YNA++N   + ++   A  +  
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVM 428

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           EM K    P++ TF+ LI+    +G+ E    +L +M Q+GI  +  ++  V+   C+  
Sbjct: 429 EMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNG 488

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           +  EA  +   M     +P+   YN++++ + +    ++AL L+   +  G    + +Y+
Sbjct: 489 KIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYN 548

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+ GL R+ + DEA      +  + + PDVV Y  +I      G    A++LL +M + 
Sbjct: 549 LLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKY 608

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           GI P     + L+      G +     L  ++  ++  P++  + I++
Sbjct: 609 GIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/444 (21%), Positives = 187/444 (42%), Gaps = 20/444 (4%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +    +++  L   G+  D       +   G  PDT+ +N +++     G LD A ++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 366 QVEIWKRDSLP--NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
              + + +  P  +  ++ ++I G+ R+G   DA K+F++M   G  P+   +N +IDG 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            K G+LE    L  +M   G  P +               +   ++   C  G + +   
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVV--------------TYNVLLSGLCRTGRMDETRA 285

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           ++ ++A    LPD  TY+ L +G  + G     L LF E   KG+   + T   L+NGL 
Sbjct: 286 LMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLC 345

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           +  +   A ++F  +   G  P+  +Y +L+   C+ R    AF ++ Q        D  
Sbjct: 346 KDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 405

Query: 603 SMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           +  ++   L K E V  A   ++EM+    D  +  +   +      GQ+++   + S +
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
            +        S   ++   CK G +  A+ +    +        +V N ++ + + S D 
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525

Query: 722 KKVHAYHLLCRMKSVGYDLDACLY 745
           ++  A  L+ +MK+ G       Y
Sbjct: 526 EQ--ALLLVEKMKNSGVSASIVTY 547


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 183/339 (53%), Gaps = 17/339 (5%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D ++Y+  +NG CK  ++ EA+ + R  E+ G  P   +Y+ LI+GL +  + +   +  
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M      P VV Y  +I G   AG+V  AM +L +M  RGI P+T  Y ALI+G CD 
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 357 GLLDQARSLQVEIWKR--DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           G +++A  +  E+  R  +  PN  T+T LI G+C+ G+ +   +  ++M  +GCFP+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 415 MFNALIDGLCKAGE-LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            + ALI GLC+ G  LE A LL   + IG                 D     ++++  C 
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCE--------------LDVVIYNSLIDGLCK 315

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A ++ + + E G  PD+ TY SLI G C  G ++ AL L +E++ KG+ P+SVT
Sbjct: 316 MGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVT 375

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           Y TLING  + DR + A ++  +M  NG  P+  +YK L
Sbjct: 376 YTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 178/341 (52%), Gaps = 17/341 (4%)

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            +Y+  I+GLC+  +  EA  +F +M++ G +PD   YN L+NG CK  +++  ++L+  
Sbjct: 92  ISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +  GF P + +Y+ LI G   A R D A     +M    I P+ V Y  +I+GL + G+
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211

Query: 324 VKDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           V+ A+ +L +M+ RG    P+   Y  LI G C  GL +       E+      PN  T+
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKME 440
           T LI G+C+ G   +A  L N+M   GC   V ++N+LIDGLCK GEL+ A  +    +E
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
            G  P +F              +  ++++  C AGL+ +A  ++ ++   G +P+ +TY 
Sbjct: 332 KGVAPDVF--------------TYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYT 377

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +LINGF +    + AL+L  E++  GL P    Y  L   L
Sbjct: 378 TLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 6/350 (1%)

Query: 76  PNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI 135
           P+   +Y   L  L S +  V+S  +   I+G  K G   +A+E F +M+E    PD + 
Sbjct: 73  PSSLRIYRPKL--LNSQDTDVIS--YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFT 128

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           YN ++N   +     + +++  EM      P +VT++ LI+G   +G+ + A+ +LDEM 
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEME 188

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--CSPDFVAYNALLNGFCKLRR 253
            RGI PN  TYT +I GLC     + A  +  +MK  G  C P+ V Y  L++G C+   
Sbjct: 189 HRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGL 248

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
            +  +  L      G  P   +Y+ LI GL +   + EA     +M     E DVV+Y  
Sbjct: 249 FEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNS 308

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL + G++  A ++   M E+G+ PD + Y +LI+G CD GLLD+A  L  E+  + 
Sbjct: 309 LIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKG 368

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +PN+ T+T LI G  +    D A +L N+M+  G  P+  ++  L   L
Sbjct: 369 IVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 2/311 (0%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           DV  Y+  +N   +K     A+ ++ EM +    P+  T+++LINGL K  + E+ + ++
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           DEM  RG  P   TYT +I G C   R D A  +  +M+  G +P+ V Y AL+ G C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 252 RRVDEALALLRSFEKDG--FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
             V+ A+ +L+  +  G    P + +Y+ LI GL +   ++    +  +M      P+  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I GL + G   +A  LL++M   G   D   YN+LI G C +G LD AR +Q+ +
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            ++   P+  T+T LI G+C  G++D+A  L  +M   G  P+   +  LI+G  +A   
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 430 EKANLLFYKME 440
           + A  L  +M+
Sbjct: 390 DHALQLVNEMK 400



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 148/295 (50%), Gaps = 5/295 (1%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           SF  N  +I+ L K    ++    +DE+++   S     +  LI G+   G  + A++  
Sbjct: 126 SFTYN-ILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDIL 184

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL---NCLPNIVTFSLLINGL 178
            +M+     P+   Y A++           A+ V  EM KL    C PN+VT++ LI+GL
Sbjct: 185 DEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEM-KLRGNECCPNVVTYTQLIHGL 243

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            + G  E+ ++ LDEM   G  PN  TYT +I GLCQ     EA  L  +M   GC  D 
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDV 303

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN+L++G CK+  +D A  +     + G  P + +Y+ LI GL  A   DEA    ++
Sbjct: 304 VIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQE 363

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           M  + I P+ V Y  +I G ++A +   A++L+++M+  G++P    Y  L K  
Sbjct: 364 MRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 164/345 (47%), Gaps = 28/345 (8%)

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           +++  I G+C+ G + +A ++F +ME+ G  P    +N LI+GLCK  +LE    L  +M
Sbjct: 93  SYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEM 152

Query: 440 EI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           +  G +PT+               +  T++  +CTAG +  A  IL ++   G  P+ +T
Sbjct: 153 QARGFSPTV--------------VTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVT 198

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLR--PDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           Y +LI G C  G +  A+ + KE++L+G    P+ VTY  LI+GL +    E       +
Sbjct: 199 YTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDE 258

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKG 614
           M  +GC P+ A Y +L+   C++  F L  ++ L  +  I    D  + +  I+   + G
Sbjct: 259 MIISGCFPNNATYTALIHGLCQKGSF-LEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG 317

Query: 615 EVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           E++ A     EM   + +  +AP    YT  + GLC  G + EAL +   +     +   
Sbjct: 318 ELDFA----REMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNS 373

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            +   LI+G  +    D A+ +      NG +    +   L +SL
Sbjct: 374 VTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 95/181 (52%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  + G  E  +E   +M    C P+   Y A+++   +K  FL A  +  EMV + 
Sbjct: 239 LIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG 298

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  ++V ++ LI+GL K G+ + A +M   M ++G+ P+ FTYT +I GLC     DEA 
Sbjct: 299 CELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEAL 358

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  +M+  G  P+ V Y  L+NGF +  R D AL L+   + +G +P    Y  L   L
Sbjct: 359 GLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418

Query: 284 F 284
           +
Sbjct: 419 Y 419



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 14/257 (5%)

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           I  +L++++   L     D ++Y   INGL +  +  +A  IF +M + G  P    Y  
Sbjct: 72  IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131

Query: 572 LMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           L+   C+  +  +  SL  +   R  S         I  F   G V+ A+  L EM+ + 
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE-----CKAIVTPPSCVKLIHGLCKRGY 685
                  YT  + GLC  G+V+ A+ +   +       C  +VT     +LIHGLC++G 
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVT---YTQLIHGLCQKGL 248

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            ++ M+     + +G          L+  L   +    + A  LL  M ++G +LD  +Y
Sbjct: 249 FEMGMEFLDEMIISGCFPNNATYTALIHGL--CQKGSFLEAAVLLNEMVAIGCELDVVIY 306

Query: 746 PKTKSLLPGPWNTREME 762
               SL+ G     E++
Sbjct: 307 ---NSLIDGLCKMGELD 320


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 214/442 (48%), Gaps = 14/442 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY + G  E A    G M         Y +N +++    +     AL V   M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   C P++VT+++L+    K      A++++D M   G  PN  TY ++I  +C+    
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L   +   GC P+ V YN +L GFC + R  +A  +L    ++   P   + + +
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+ L R     +   +  KM +     +VV Y  +I G+ E G V  A++LLS+M+  G 
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN ++KG C     + A  L +++ + D LP+  TF  +I   C+ G++  A +
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F +M + GC P+   ++ +I GL KAG++E+A  L  +M            ++G N   
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMA-----------NKGFNT-- 476

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           DK   + + E       I +  +++ +L +SG  P  + YN+++ G C+ G  + A+ + 
Sbjct: 477 DKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVL 535

Query: 520 KELQLKGLRPDSVTYGTLINGL 541
            ++   G  PD  TY  LI GL
Sbjct: 536 ADMVSCGCMPDESTYIILIEGL 557



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 219/486 (45%), Gaps = 24/486 (4%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           +S     GD + AL   G        PDV + N ++    R+     A  V        C
Sbjct: 71  LSALIHRGDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARVVEA-----C 122

Query: 165 LP--NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            P     T+  L++G  ++G  E A +++  M       + + +  +I  LC+  R  +A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +   M   GC+PD V YN LL   CK R   +AL L+     +G  P   +Y+ +ID 
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           + R    D+A      +     +P+ V Y  +++G     +  DA ++L +M      P+
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               N +I   C  GLL +      ++ K     N  T+  +I GMC  G VD A +L +
Sbjct: 303 EATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLS 362

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M+  GC P +  +N ++ GLC A   E A  L  KM            SQ  +R+ D +
Sbjct: 363 NMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM------------SQ-NDRLPDNS 409

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  T++  +C  GLI +A+++  Q+ E G  P+  TY+++I G  K G +  AL+L  E+
Sbjct: 410 TFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG   D + Y  L   L + D+ E+  ++  ++  +G +P   +Y +++   CR  K 
Sbjct: 470 ANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKT 528

Query: 583 SLAFSL 588
             A  +
Sbjct: 529 DYAIDV 534



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 226/515 (43%), Gaps = 62/515 (12%)

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +S L      D A RL   +  S   PD    N L+   C+  R  +A    R  E  G 
Sbjct: 71  LSALIHRGDLDAALRL---VGSSPRPPDVPLANRLVRDLCRRGRPADAA---RVVEACGP 124

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
                +Y  L+DG  RA   ++A      M           +  +I  L E G+V DA+ 
Sbjct: 125 EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALV 184

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L  M  RG  PD   YN L++  C      QA  L   +      PN  T+ ++I  MC
Sbjct: 185 VLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMC 244

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           R G VD A++L N +   GC P+   +N ++ G C       A+ +  +M     P    
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPP--- 301

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     ++A+L  ++   C  GL+ K    L ++++ G   +++TYN++I+G C+ 
Sbjct: 302 ----------NEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQ 351

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED-------------------- 549
           GN++ AL+L   +Q  G +PD VTY T++ GL   DR ED                    
Sbjct: 352 GNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTF 411

Query: 550 ---------------AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
                          AF +F QMP+ GC P+   Y +++    +  K   A  L L  + 
Sbjct: 412 NTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL-LNEMA 470

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW----LIGLCQDGQ 650
           +     D+  + + E L K   E+ I+ ++++  KL D  ++P T+     L+GLC++G+
Sbjct: 471 NKGFNTDKMYRVLTESLNK---EDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGK 527

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
              A+++ + +V C  +    + + LI GL   GY
Sbjct: 528 TDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGY 562



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 1/365 (0%)

Query: 75  KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           K  G+    + +D +R+      +  + V+I    + GD ++A E    +    C+P+  
Sbjct: 210 KGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTV 269

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            YN VL      + ++ A  +  EMV+ NC PN  T +++IN L + G  +     L++M
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKM 329

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           ++ G   N  TY  VISG+C+    D A  L   M+  GC PD V YN +L G C   R 
Sbjct: 330 SKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 389

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           ++A  L+    ++  +P   +++ +I    +     +A+  +++M E+   P+   Y  +
Sbjct: 390 EDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTI 449

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I GL++AGK++ A++LL++M  +G   D   Y  L +       +++   +  ++     
Sbjct: 450 IGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGI 508

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            P T  +  ++ G+CRNG  D A  +   M   GC P    +  LI+GL   G  ++A  
Sbjct: 509 SPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARE 568

Query: 435 LFYKM 439
           L  ++
Sbjct: 569 LLSRL 573



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 169/339 (49%), Gaps = 3/339 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  + +    D   + L+ L S      +  +  ++ G+  +     A E   +M  
Sbjct: 237 NVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVR 296

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE-MVKLNCLPNIVTFSLLINGLSKSGKTE 185
            +C P+    N ++N   RK L L  + +Y E M K  C  N+VT++ +I+G+ + G  +
Sbjct: 297 ENCPPNEATLNVIINTLCRKGL-LQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVD 355

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A+++L  M   G  P+  TY  V+ GLC  +R ++A  L +KM  +   PD   +N ++
Sbjct: 356 SALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTII 415

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           + +C+   + +A  + +   + G  P   +YS +I GL +A + ++A     +M  +   
Sbjct: 416 SFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN 475

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            D  +Y V+   L++  K+++ ++++  +++ GI P T  YN ++ G C  G  D A  +
Sbjct: 476 TD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDV 534

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
             ++     +P+  T+ ILI G+   G   +A++L +++
Sbjct: 535 LADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +ISG  + G+ + ALE    M+ F C+PD+  YN VL        +  A  +  +M
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + + LP+  TF+ +I+   + G    A ++  +M ++G  PN  TY+ +I GL +  + 
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M + G + D + Y  L     K  +++E + ++   +  G  P+   Y+ +
Sbjct: 460 EQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTV 518

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + GL R  + D A      M      PD   Y ++I GL   G  K+A +LLS +  R +
Sbjct: 519 LLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578

Query: 340 VPDTYCYNALIKGFCDLGLLDQ 361
           +      N+LIK   +  LLDQ
Sbjct: 579 L-----SNSLIKN--EALLLDQ 593


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 221/453 (48%), Gaps = 23/453 (5%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDV  +N++L+   R         ++  M + +  P+IVT+ +L+N L K+G    A+K+
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 191 LDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFL--KMKD-SGCSPDFVAYNALL 245
           LD M+  G  +  +      V+ GLC+I R  +A  +F+  +M+   GC+P+ V YN L 
Sbjct: 189 LDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAI-VFVDERMRQVHGCAPNTVTYNCLA 247

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +  C++  +D A  ++   EK+G  P + + + ++ GL R  R   A  ++R+     +E
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 306 P--DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
              + V Y  ++        V  AM+L  +M ++G  PD   Y  +I G    G L  A 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           ++   + K     +   + ILI G CR   + +A +LF +M+ AG  P V  +N L+  L
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CKAG+    + L   M + G  P++               +  T+V  YC AG   +A K
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVV--------------TFGTLVHGYCKAGKTDEALK 473

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           I   + E+   P+ + YN+LI+  CK   ++ A+KLF E++   +  +  TY  L+ GLQ
Sbjct: 474 IFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQ 533

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
             +  E AF +  QM +  CTP       LM W
Sbjct: 534 DKNMPEKAFELMDQMKEERCTPDYVTMDVLMEW 566



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 211/469 (44%), Gaps = 21/469 (4%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D L +G  +     F  L+S   + G+     E F  M+E   +PD+  Y  +LN   + 
Sbjct: 120 DSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKA 179

Query: 147 QLFLLALAVYYEMVK--LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR--GILPN 202
            L   AL V   M     +   +IV  + +++GL K G+ + AI  +DE  ++  G  PN
Sbjct: 180 GLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPN 239

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  +    C++   D A ++  +M+  G +P+ +  N ++ G C++ RV  AL   R
Sbjct: 240 TVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFR 299

Query: 263 SFEKDGFVPRLG--SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                    R    +YS L+           A   + +M ++   PD V+Y  MI GL++
Sbjct: 300 EKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQ 359

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           AG++ DA  + + M++ G   D   YN LI GFC    L +A  L  E+      P+ +T
Sbjct: 360 AGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYT 419

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +  L+  +C+ G      +L   M   GC PSV  F  L+ G CKAG+ ++A  +F  M 
Sbjct: 420 YNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM- 478

Query: 441 IGKNPTLFLRLSQGGNRVHDKASL-QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        G  R+     +  T+++  C +  +  A K+  ++ E+    ++ TY
Sbjct: 479 -------------GEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTY 525

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           N+L+ G         A +L  +++ +   PD VT   L+  L  +   E
Sbjct: 526 NALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETE 574



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 12/366 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESFG-KMKEFD-CQPDVYIYNAV 139
           + LD + S    V +D+  +  ++ G  K+G  + A+     +M++   C P+   YN +
Sbjct: 187 KVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCL 246

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE-----M 194
            +   R     +A  +   M K    PN++T + ++ GL + G+   A+    E     +
Sbjct: 247 ADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWL 306

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
             RG   N  TY+ ++S     N    A  LF +M D G  PD V Y  +++G  +  R+
Sbjct: 307 EARG---NAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRL 363

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            +A  +  S +K GF     +Y+ LI G  R KR  EA+  + +M    ++PDV  Y  +
Sbjct: 364 VDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTL 423

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L +AG      +LL +M + G  P    +  L+ G+C  G  D+A  +   + +   
Sbjct: 424 LSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARI 483

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
            PNT  +  LI  +C++  VD A KLF++M +     +V  +NAL+ GL      EKA  
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFE 543

Query: 435 LFYKME 440
           L  +M+
Sbjct: 544 LMDQMK 549



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 209/487 (42%), Gaps = 55/487 (11%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
            D A  L  S       P + +++ L+  L RA         +  M E  ++PD+V YG+
Sbjct: 112 ADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGI 171

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
           ++  L +AG V DA+K+L  M   G  +  D    N ++ G C +G L  A     E  +
Sbjct: 172 LLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMR 231

Query: 372 R--DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           +     PNT T+  L    CR G +D A ++  +MEK G  P+V   N ++ GLC+ G +
Sbjct: 232 QVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRV 291

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
             A L F++    +  T +L     GN V    +  T+V  +     +  A ++  ++A+
Sbjct: 292 GAA-LDFFR----EKRTTWLEAR--GNAV----TYSTLVSAFLHCNNVALAMELFHEMAD 340

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  PD + Y ++I+G  + G +  A  +   ++  G + D   Y  LI G  R  R  +
Sbjct: 341 QGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHE 400

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A ++F +M   G  P    Y +L++  C+   FS    L    +      DD    S+  
Sbjct: 401 AHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMI------DDGCQPSVVT 454

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F           G L                 + G C+ G+  EAL IF  + E +  + 
Sbjct: 455 F-----------GTL-----------------VHGYCKAGKTDEALKIFRSMGEAR--IQ 484

Query: 670 PPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           P + +   LI  LCK   +D+A+ +F    +N         N LL+ L     N    A+
Sbjct: 485 PNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGL--QDKNMPEKAF 542

Query: 728 HLLCRMK 734
            L+ +MK
Sbjct: 543 ELMDQMK 549



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 155/324 (47%), Gaps = 2/324 (0%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE--MVKLNCLPN 167
           +VGD + A +   +M++    P+V   N ++    R      AL  + E     L    N
Sbjct: 252 RVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGN 311

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            VT+S L++         +A+++  EM  +G  P+   Y  +ISGL Q  R  +A  +  
Sbjct: 312 AVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAA 371

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            MK +G   D  AYN L+ GFC+ +R+ EA  L    +  G  P + +Y+ L+  L +A 
Sbjct: 372 SMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAG 431

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            +         M ++  +P VV +G ++ G  +AGK  +A+K+   M E  I P+T  YN
Sbjct: 432 DFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYN 491

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI   C    +D A  L  E+ + +   N  T+  L+ G+    M + A +L ++M++ 
Sbjct: 492 TLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEE 551

Query: 408 GCFPSVGMFNALIDGLCKAGELEK 431
            C P     + L++ L + GE E+
Sbjct: 552 RCTPDYVTMDVLMEWLPEIGETER 575



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S ++S  L  N   L  +   E+        + ++F +ISG  + G    A      MK+
Sbjct: 316 STLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKK 375

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + D   YN ++    RK+    A  ++ EM      P++ T++ L++ L K+G    
Sbjct: 376 AGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSA 435

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             ++L  M   G  P+  T+  ++ G C+  + DEA ++F  M ++   P+ V YN L++
Sbjct: 436 VDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLID 495

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK R VD A+ L     ++     + +Y+ L+ GL      ++A+    +M EE+  P
Sbjct: 496 FLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           D V   V++  L E G+ +     +    E+G
Sbjct: 556 DYVTMDVLMEWLPEIGETERLKCFMEQRDEKG 587


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 164/602 (27%), Positives = 273/602 (45%), Gaps = 65/602 (10%)

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F++    LAL V+  +      P+  T ++L+  L ++ + +   +    +  +G+ P+ 
Sbjct: 194 FKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDV 252

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           + +T  I+  C+  + +EA  LF KM+++G  P+ V YN +++G     R DEA      
Sbjct: 253 YLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEK 312

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G  P L +YS L+ GL +AKR  +AY   ++M E+   P+V++Y  +I  L EAG 
Sbjct: 313 MVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGS 372

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  A+++   M  +G+   +  YN LIKG+C  G  D A  L  E+       N  +FT 
Sbjct: 373 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTS 432

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---- 439
           +IC +C + M D A +   +M      P  G+   LI GLCK G+  KA  L+ K     
Sbjct: 433 VICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKG 492

Query: 440 ----------------EIGKNPTLFLRLSQ---GGNRVHDKASLQTMVEQYCTAGLIHKA 480
                           E GK    F R+ +   G   V D+ S  T++   C    + +A
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGF-RIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEA 551

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
           +  + ++ + G  PD  TY+ LI G   +  +  A++ + + +  G+ PD  TY  +I+G
Sbjct: 552 FMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDG 611

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL------------ 588
             + +R E+  ++F +M  N   P+  VY  L+   CR  + S+A  L            
Sbjct: 612 CCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPN 671

Query: 589 ---WLQYLRDIS--GRDDESMKSIEEFLQKGEVENA------IQG-------------LL 624
              +   ++ +S   R +E+   +EE   +G   N       I G             L 
Sbjct: 672 SATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 731

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCK 682
           EM  K        YT+ + G  +DG V EA  +   + E K IV P S    + I+G  K
Sbjct: 732 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMRE-KGIV-PDSITYKEFIYGYLK 789

Query: 683 RG 684
           +G
Sbjct: 790 QG 791



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 245/534 (45%), Gaps = 39/534 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMK--TKNPQVGFRFFIWAAKRKRLRSFASNSAV----IS 71
           +E  +EP L         S+++K  TK  ++G  + +   K    + F  N  V    I 
Sbjct: 314 VERGVEPTL------ITYSILVKGLTKAKRIGDAYCVL--KEMTEKGFPPNVIVYNNLID 365

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
            L++    +   +  D + S  +S+ S  +  LI GY K G  + A     +M       
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +   + +V+ +     +F  AL    EM+  N  P     + LI+GL K GK   A+++ 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +   +G L +  T   ++ GLC+  + +E +R+  ++   G   D V+YN L++G C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           +++DEA   +    K G  P   +YS LI GL    + +EA  ++       + PDV  Y
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            VMI G  +A + ++  KL  +M    + P+T  YN LI  +C  G L  A  L+ ++  
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +   PN+ T+T LI GM     V++A+ L  +M   G  P+V  + ALIDG  K G++ K
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
              L  +M   KN             VH +K +   M+  Y   G + +A ++L ++ E 
Sbjct: 726 VECLLREMH-SKN-------------VHPNKITYTVMIGGYARDGNVTEASRLLHEMREK 771

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           G +PD ITY   I G+ K G   G L+ FK         D   Y  +I G  ++
Sbjct: 772 GIVPDSITYKEFIYGYLKQG---GVLQAFKG-------SDEENYAAIIEGWNKL 815



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/567 (25%), Positives = 248/567 (43%), Gaps = 67/567 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F   I+ + K G  E+A+E F KM+E    P+V  YN V++       +  A     +M
Sbjct: 254 LFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKM 313

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    P ++T+S+L+ GL+K+ +   A  +L EMT++G  PN   Y  +I  L +    
Sbjct: 314 VERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSL 373

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS-- 277
           ++A  +   M   G S     YN L+ G+CK  + D A  LL+     GF    GS++  
Sbjct: 374 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSV 433

Query: 278 ---------------------------------CLIDGLFRAKRYDEAYAWYRKMFEEKI 304
                                             LI GL +  ++ +A   + K   +  
Sbjct: 434 ICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGF 493

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
             D      ++ GL EAGK+++  ++  ++  RG V D   YN LI G C    LD+A  
Sbjct: 494 LVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFM 553

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
              E+ K+   P+ +T++ILI G+     V++A + +   ++ G  P V  ++ +IDG C
Sbjct: 554 FMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCC 613

Query: 425 KAGELEKANLLF--------------YKMEIG---KNPTLFLRLSQGGNRVH-----DKA 462
           KA   E+   LF              Y   IG   ++  L + L    +  H     + A
Sbjct: 614 KAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSA 673

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++++       + +A  +L ++   G  P++  Y +LI+G+ K+G +     L +E+
Sbjct: 674 TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 733

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             K + P+ +TY  +I G  R     +A R+  +M + G  P    YK  +    ++   
Sbjct: 734 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGV 793

Query: 583 SLAFSLWLQYLRDISGRDDESMKSIEE 609
             AF           G D+E+  +I E
Sbjct: 794 LQAF----------KGSDEENYAAIIE 810


>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
          Length = 906

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 286/615 (46%), Gaps = 46/615 (7%)

Query: 100 VFFVLISGYYKVG----DCEKALESFGKMKEFDCQPDVYIYNAVL----NIAFRKQLFLL 151
           V F+ I+ ++  G       KAL++  K+   DC   +   +++     N++ +K+    
Sbjct: 306 VMFISIARFFPKGWVVLFVRKALKAVAKL---DCGAKLLELSSLAGGCSNMSLQKE---- 358

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +  E+V  N LP  +  +L+I  +   G+ +V+  +L ++   G  P+  TY IVI 
Sbjct: 359 ADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIK 418

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+ NR D+A  L   M+  G  PD    + ++  +CK+  ++ AL L     KDG  P
Sbjct: 419 CLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEP 478

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y  +I  L R +R  EA A  R+M  E + PD ++Y  +I G S   + ++  ++ 
Sbjct: 479 SIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIF 538

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M +RG+ P  + Y +LI G      + +A      + +    P T  +T+LI    R 
Sbjct: 539 DEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRK 598

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK-----------AGELEKANLLFYKME 440
           G V     L   M K    P +  + AL+ G+C+           A +L++A  + ++M 
Sbjct: 599 GDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRM- 657

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                     L Q    + D  + +    Q CT  +I  A  I+  L E+G +PD+  YN
Sbjct: 658 ----------LPQ----IIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYN 703

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +ING C+   ++ A  L   +   G+ P+ VTY  L+N   R+     A ++F  +  +
Sbjct: 704 GMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSD 763

Query: 561 GCTPSPAVYKSLMTW--SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           GC      Y + +       R K +L+F L + + R          K +E  L +  ++ 
Sbjct: 764 GCVFDKITYNTFIKGLSLAGRMKEALSF-LLMMHKRGFVPSKASYDKLMELLLAENAIDI 822

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            +Q   +M F+    + A YT  L+ L +DG+  EA  IF+++++ +  +   +  K + 
Sbjct: 823 VLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKRKYLDKKT-KKCLE 881

Query: 679 GLC-KRGYLDLAMDV 692
            LC K+G LDLA ++
Sbjct: 882 ELCYKQGELDLAFEM 896



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 259/598 (43%), Gaps = 57/598 (9%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL-SKSGKTEVAIK 189
           PD  + +A++    R      AL+ ++ +V+    P+  + + L+  + S S  TE    
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++  M     LP    + ++I GLC     D+A  LF  M  SG +P    Y +L   +C
Sbjct: 105 LVLSMGNPSPLPVS-DFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM-FEEKIEPDV 308
           K RR  +A  + +     G        + LI    R  R + A   +R+M  +E ++ D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  MI GL E G+V   +++  +M +RGI PD   YN +I+ +C    +  A    ++
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAA----MD 279

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF------------ 416
           I+K                   +G + +A+ LF+KM ++G FP   MF            
Sbjct: 280 IYK-------------------DGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWV 320

Query: 417 --------NALIDGLCKAGELEKANLL--FYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                    A+    C A  LE ++L      M + K     L      N +     L  
Sbjct: 321 VLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNL 380

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           M+   C+ G +  +Y +L +L   G  P ++TYN +I   C+   ++ A  L   +Q +G
Sbjct: 381 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 440

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           +RPD  T   ++    ++   E A  +FG+M ++G  PS AVY S++   CR R+   A 
Sbjct: 441 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAE 500

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--YTIWLI 643
           +   Q +R+    D+    S I  +    +  N  +   EM  +    Q  P  Y   + 
Sbjct: 501 ATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKR--GLQPGPHAYGSLIN 558

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKN 699
           GL +  ++++AL     ++E    + P + +   LI+   ++G + L +D+ +  +K 
Sbjct: 559 GLVKGNKIRKALGYLERMLE--EGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKT 614



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 19/316 (6%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F    KR       +  ++I+ L+K N        L+ +    ++  + ++ +LI+ +
Sbjct: 536 RIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQF 595

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVL-----NIAFRKQLFLLALAV---YYEMV 160
           ++ GD    L+    M + +  PD+  Y A++     NIA R     LA  +    Y + 
Sbjct: 596 FRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLF 655

Query: 161 KLNCLPNIVTFSLLINGLSKSGK------TEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++  LP I+      NG  K  +       +VA  ++ ++ + G++P+   Y  +I+GLC
Sbjct: 656 RM--LPQIIDTR---NGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLC 710

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           + N+ D+AY L   M  +G  P+ V Y  L+N   +L  ++ A+ L  S   DG V    
Sbjct: 711 RANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKI 770

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+  I GL  A R  EA ++   M +    P    Y  ++  L     +   ++L  DM
Sbjct: 771 TYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDM 830

Query: 335 RERGIVPDTYCYNALI 350
             +G  P    Y +L+
Sbjct: 831 LFQGYTPRYANYTSLL 846



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 35/191 (18%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L + N  D  +  L  +    +      + +L++   ++GD   A++ F  +  
Sbjct: 703 NGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNS 762

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C  D   YN                                TF   I GLS +G+ + 
Sbjct: 763 DGCVFDKITYN--------------------------------TF---IKGLSLAGRMKE 787

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+  L  M +RG +P+K +Y  ++  L   N  D   +LF  M   G +P +  Y +LL 
Sbjct: 788 ALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLL 847

Query: 247 GFCKLRRVDEA 257
              K  R  EA
Sbjct: 848 VLAKDGRWSEA 858


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 180/717 (25%), Positives = 323/717 (45%), Gaps = 43/717 (5%)

Query: 43  NPQVGFRFFIWAAKRKR----LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV- 97
           NP+    FF  A+        LRS+     +I +LL  N        L  L +GNV V+ 
Sbjct: 105 NPKTALDFFRLASDSFSFSFSLRSYC---LLIGLLLDANLLSAARVVLIRLINGNVPVLP 161

Query: 98  ---SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
               D    +      +  C    +   + K  D   +VY         F++    LAL 
Sbjct: 162 CGLRDSRVAIADAMASLSLC---FDEEIRRKMSDLLIEVYC------TQFKRDGCYLALD 212

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+  +      P+  T ++L+  L ++ + +   +  D +  +G+ P+ + +T  I+  C
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFC 271

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  + +EA +LF KM+++G +P+ V +N +++G     R DEA        + G  P L 
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +YS L+ GL RAKR  +AY   ++M ++   P+V++Y  +I    EAG +  A+++   M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G+   +  YN LIKG+C  G  D A  L  E+       N  +FT +IC +C + M 
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           D A +   +M      P  G+   LI GLCK G+  KA  L+++            L++G
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-----------LNKG 500

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V D  +   ++   C AG + +A++I  ++   G + D ++YN+LI+G C    ++ 
Sbjct: 501 --FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A     E+  +GL+PD+ TY  LI GL  +++ E+A + +    +NG  P    Y  ++ 
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618

Query: 575 WSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             C+  +       + + + +++          I  + + G +  A++   +M  K    
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAM 690
             A YT  + G+    +V+EA  +F    E +     P+      LI G  K G + + +
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFE---EMRMEGLEPNVFHYTALIDGYGKLGQM-VKV 734

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
           +  L  + +  +  P    Y +    +++D     A  LL  M+  G   D+  Y +
Sbjct: 735 ECLLREMHSKNV-HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 250/534 (46%), Gaps = 39/534 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMK--TKNPQVGFRFFIWAAKRKRLRSFASNSAV----IS 71
           +E  +EP L         S+++K  T+  ++G  +F+     K+   F  N  V    I 
Sbjct: 322 VERGMEPTL------ITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLID 373

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
             ++    +   +  D + S  +S+ S  +  LI GY K G  + A     +M       
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +   + +V+ +     +F  AL    EM+  N  P     + LI+GL K GK   A+++ 
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +   +G + +  T   ++ GLC+  + DEA+R+  ++   GC  D V+YN L++G C  
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           +++DEA   L    K G  P   +YS LI GLF   + +EA  ++       + PDV  Y
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            VMI G  +A + ++  +   +M  + + P+T  YN LI+ +C  G L  A  L+ ++  
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +   PN+ T+T LI GM     V++A+ LF +M   G  P+V  + ALIDG  K G++ K
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
              L  +M   KN             VH +K +   M+  Y   G + +A ++L ++ E 
Sbjct: 734 VECLLREMH-SKN-------------VHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           G +PD ITY   I G+ K G   G L+ FK         D   Y  +I G  ++
Sbjct: 780 GIVPDSITYKEFIYGYLKQG---GVLEAFKG-------SDEENYAAIIEGWNKL 823



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 248/562 (44%), Gaps = 58/562 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ L++ N F    +  D +  G VS    +F   I+ + K G  E+A++ F KM+E  
Sbjct: 232 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P+V  +N V++       +  A     +MV+    P ++T+S+L+ GL+++ +   A 
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L EMT++G  PN   Y  +I    +    ++A  +   M   G S     YN L+ G+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  + D A  LL+     GF    GS++ +I  L     +D A  +  +M    + P  
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            L   +I GL + GK   A++L      +G V DT   NAL+ G C+ G LD+A  +Q E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530

Query: 369 IW-----------------------------------KRDSLPNTHTFTILICGMCRNGM 393
           I                                    KR   P+ +T++ILICG+     
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLR 450
           V++A + ++  ++ G  P V  ++ +IDG CKA   E+    F +M    +  N  ++  
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650

Query: 451 LSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           L +   R                     + A+  ++++       + +A  +  ++   G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++  Y +LI+G+ K+G +     L +E+  K + P+ +TY  +I G  R     +A 
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770

Query: 552 RIFGQMPQNGCTPSPAVYKSLM 573
           R+  +M + G  P    YK  +
Sbjct: 771 RLLNEMREKGIVPDSITYKEFI 792


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 173/695 (24%), Positives = 307/695 (44%), Gaps = 57/695 (8%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKN-PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           E  L     FL+ + V +V+   ++ P++  RFF+WA   +R   ++   A    L    
Sbjct: 93  ERVLRRCRGFLTDSVVVAVLGAVRDAPELCARFFLWA---ERQVGYSHTGACYDALADAL 149

Query: 78  GFDLYWQT----LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
           GFD   +     L E+   +  V+  +  VL+    + G   +ALE  G++K+F  +P  
Sbjct: 150 GFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSK 209

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             YNA++ +        L   V  EM +     +  T     + L K G+   A+ M++ 
Sbjct: 210 VTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE- 268

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
             +     +    T +ISGL + +  DEA     +M+ + C P+ V Y  LL+GF K ++
Sbjct: 269 --REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 326

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           +     ++     +G  P    ++ L+      K Y  AY    +M      P  V+Y +
Sbjct: 327 LGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 386

Query: 314 MIRGLSEAGKVKD------AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
            I  +    K+        A K+  +M     V +        +  C +G  D+A  L  
Sbjct: 387 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 446

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ ++  +P+T T++ +I  +C    V+ A  LF +M+  G  P V  +  LID  CKAG
Sbjct: 447 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAG 506

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            +E+A  LF +M  +G +PT+               +   ++  Y  A  + +A  I  +
Sbjct: 507 LIEQAQWLFEEMRSVGCSPTV--------------VTYTALIHAYLKAKQVPQANDIFHR 552

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL----------------QLKGLRPD 530
           + ++G  P+ +TY +L++G CK GNI+ A +++ +L                    L P+
Sbjct: 553 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 612

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            VTYG L++GL +  + + A  +   M  +GC P+  VY +L+   C+  K   A  ++L
Sbjct: 613 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 672

Query: 591 Q-----YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
           Q     YL  +          I+   + G ++ A++ L +M        +  YT  + GL
Sbjct: 673 QMTKCGYLPSVH----TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 728

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
           C+ G+ ++AL + S++ E        +   LI GL
Sbjct: 729 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/585 (24%), Positives = 234/585 (40%), Gaps = 50/585 (8%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           +  L + L   G+   A ++L E+ +           +++   C+    +EA     ++K
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           D G  P  V YNAL+       +VD    + +   + GF     +  C    L +  R+ 
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A     +   E  + D VL   MI GL EA    +AM  L  MR    +P+   Y  L+
Sbjct: 262 DALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            GF     L   + +   +      PN   F  L+   C       A KL N+M   GC 
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 378

Query: 411 PSVGMFNALIDGLCKA----------------GELEKANLLFYKMEI----------GKN 444
           P   ++N  I  +C                  GE+  AN +  K+ +          GK 
Sbjct: 379 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 438

Query: 445 PTLFLRLSQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
              F  + +   +  V D ++   ++   C A  + KA+ +  ++   G  PD+ TY  L
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 498

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+ FCK G I  A  LF+E++  G  P  VTY  LI+   +  +   A  IF +M   GC
Sbjct: 499 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 558

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE-------FLQKGE 615
            P+   Y +L+   C+    S AF ++ + +      D +     E+        +  G 
Sbjct: 559 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 618

Query: 616 VENAIQGLLEMD--FKLNDFQLAP--------YTIWLIGLCQDGQVKEALNIFSVLVECK 665
           + + +    ++D   +L D  L+         Y   + G C+ G++  A  +F  + +C 
Sbjct: 619 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 678

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            + +  +   LI  + K G LDLAM V    LK+     P V  Y
Sbjct: 679 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS--CTPNVVTY 721



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 16/252 (6%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+RS   S     +  LI  Y K     +A + F +M +  C+P+   Y A+++   +
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574

Query: 146 KQLFLLALAVYYEMV----------------KLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
                 A  VY +++                +    PN+VT+  L++GL K+ K + A +
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +LD M   G  PN   Y  +I G C+  + D A  +FL+M   G  P    Y +L++   
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 694

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K  R+D A+ +L    KD   P + +Y+ +IDGL R    ++A      M E+   P+VV
Sbjct: 695 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 754

Query: 310 LYGVMIRGLSEA 321
            Y  +I GL ++
Sbjct: 755 TYTALIDGLGQS 766



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 83/148 (56%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A++  L K +  D   + LD + S        V+  LI G+ K G  + A E F +M + 
Sbjct: 618 ALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC 677

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P V+ Y ++++  F+     LA+ V  +M+K +C PN+VT++ +I+GL + G++E A
Sbjct: 678 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKA 737

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +K+L  M ++G  PN  TYT +I GL Q
Sbjct: 738 LKLLSLMEEKGCSPNVVTYTALIDGLGQ 765



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 94/458 (20%), Positives = 180/458 (39%), Gaps = 74/458 (16%)

Query: 322 GKVKDAMKLLSDM-----RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G V+DA +L +       R+ G      CY+AL       G    A  L  EI + D   
Sbjct: 113 GAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREV 172

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG--------- 427
                 +L+   CR GM ++A +   +++  G  PS   +NAL+  L  AG         
Sbjct: 173 LGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ 232

Query: 428 -ELEKANLLFYKMEIGKNPTLFLRLSQGGNRV----HDKASLQTMVEQYCTAGLIHKAY- 481
            E+ ++     +  +G       +  +  + +     +   L T++  +  +GL+  +Y 
Sbjct: 233 KEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYF 292

Query: 482 ----KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
                 L ++  +  +P+++TY +L++GF K   +    ++   +  +G  P+   + +L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK------FSLAFSLWLQ 591
           ++          A+++  +M   GC P   VY   +   C + K        LA  ++ +
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412

Query: 592 YLR--------DIS---------GRDDESMKSIEEFLQKG-------------------E 615
            L         +++         G+ D++ + I+E ++KG                   +
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV- 674
           VE A     EM        +  YTI +   C+ G +++A  +F    E +++   P+ V 
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE---EMRSVGCSPTVVT 529

Query: 675 --KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
              LIH   K   +  A D+F   +  G   RP    Y
Sbjct: 530 YTALIHAYLKAKQVPQANDIFHRMVDAG--CRPNDVTY 565


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 214/441 (48%), Gaps = 18/441 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+  Y+  G    A++ F  ++  + Q   +    +L+        +     Y E+
Sbjct: 155 VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEI 214

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    P +  +++LIN   K G    A  + +E+ +RG+ P   ++  +I+GLC+    
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DE +RL   M+++   PD   Y+ L++G CK  R+D A  L    ++ G  P   +++ L
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  R++R D A   Y +M    ++PD+V+Y  ++ GL + G V  A KL+ +MR  G+
Sbjct: 335 IDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGM 394

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   Y  LI G+C  G L+ A  ++  + +   + +   FT LI G CR+G V DA++
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAER 454

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRV 458
              +M +AG  P    +  +IDG CK G ++    L  +M+I G  P +           
Sbjct: 455 TLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVI---------- 504

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   ++   C  G +  A  +L  +   G  PD ITYN L+ G CK G     LKL
Sbjct: 505 ----TYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560

Query: 519 FKELQLKGLRPDSVTYGTLIN 539
             E   KGL  D   Y +L++
Sbjct: 561 RNE---KGLIVDYAYYTSLVS 578



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 184/359 (51%), Gaps = 13/359 (3%)

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           +  + ++ + G  P    YN L+N FCK   + +A  +     K G  P   S++ LI+G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +++  DE +   + M E +I PDV  Y V+I GL + G++  A +L  +M++RG+ P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              + ALI G C    +D A +   ++      P+   +  L+ G+C+ G V+ A+KL +
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   G  P    +  LIDG CK G+LE A      MEI K       +++ G  V D  
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESA------MEIRKG------MNEEG-VVLDNV 434

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   ++  +C  G +  A + L ++ E+G  PD  TY  +I+G+CK GN+    KL KE+
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           Q+ G +P  +TY  L+NGL +  + ++A  +   M   G TP    Y  L+   C+  K
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK 553



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 195/389 (50%), Gaps = 18/389 (4%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           + ++ E+   P V  YN ++N   ++     A  ++ E+ K    P  V+F+ LINGL K
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           S   +   ++   M +  I P+ FTY+++I GLC+  R D A +LF +M+  G  P+ + 
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           + AL++G C+ RR+D A+         G  P L  Y+ L++GL +    ++A     +M 
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
              ++PD + Y  +I G  + G ++ AM++   M E G+V D   + ALI GFC  G + 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A     E+ +    P+  T+T++I G C+ G V    KL  +M+  G  P V  +N L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           +GLCK G+++ AN+L   M  +G  P              D  +   ++E +C  G   K
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTP--------------DDITYNILLEGHCKNG---K 553

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCK 508
           A  +L    E G + D   Y SL++ + K
Sbjct: 554 AEDLLKLRNEKGLIVDYAYYTSLVSEYNK 582



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 222/448 (49%), Gaps = 31/448 (6%)

Query: 220 DEAYRLFLKMKDSG---CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           D A  +F  + D+    CS +FV ++AL+  +     V +A+   R      F       
Sbjct: 134 DSAASVFAAILDTAGTRCS-NFV-FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGC 191

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
             L+D +  +      + +Y ++ E    P V  Y ++I    + G ++DA  + +++R+
Sbjct: 192 GYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRK 251

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG+ P T  +N LI G C    LD+   L+  + +    P+  T+++LI G+C+ G +D 
Sbjct: 252 RGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDV 311

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGG 455
           A++LF++M++ G  P+   F ALIDG C++  ++ A   +++M  +G  P L +      
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM------ 365

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                     T++   C  G ++KA K++ ++   G  PD ITY +LI+G+CK G++  A
Sbjct: 366 --------YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +++ K +  +G+  D+V +  LI+G  R  R  DA R   +M + G  P  A Y  ++  
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENA---IQGLLEMDFK 629
            C++    + F L  +    I+G     +     +    ++G+++NA   ++ +L +   
Sbjct: 478 YCKKGNVKMGFKLLKEM--QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            +D     Y I L G C++G+ ++ L +
Sbjct: 536 PDDIT---YNILLEGHCKNGKAEDLLKL 560



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 161/318 (50%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            +E+R   +   +  F  LI+G  K  + ++       M+E    PDV+ Y+ +++   +
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +    +A  ++ EM +    PN +TF+ LI+G  +S + + A+    +M   G+ P+   
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM 365

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +++GLC++   ++A +L  +M+  G  PD + Y  L++G+CK   ++ A+ + +   
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++G V    +++ LI G  R  R  +A    R+M E  ++PD   Y ++I G  + G VK
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVK 485

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
              KLL +M+  G  P    YN L+ G C  G +  A  L   +      P+  T+ IL+
Sbjct: 486 MGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545

Query: 386 CGMCRNGMVDDAQKLFNK 403
            G C+NG  +D  KL N+
Sbjct: 546 EGHCKNGKAEDLLKLRNE 563



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 157/325 (48%), Gaps = 3/325 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S  T+ + + K++N   GFR      + +      + S +I  L K    D+  Q  DE
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDE 318

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++   +      F  LI G  +    + A+ ++ +M     +PD+ +YN +LN   +   
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A  +  EM  +   P+ +T++ LI+G  K G  E A+++   M + G++ +   +T 
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +ISG C+  R  +A R   +M ++G  PD   Y  +++G+CK   V     LL+  + +G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
             P + +Y+ L++GL +  +   A      M    + PD + Y +++ G  + GK +D +
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLL 558

Query: 329 KLLSDMRERGIVPDTYCYNALIKGF 353
           KL +   E+G++ D   Y +L+  +
Sbjct: 559 KLRN---EKGLIVDYAYYTSLVSEY 580



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 201/441 (45%), Gaps = 40/441 (9%)

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
           +S  GK   A    + +   G     + ++AL+  + D G +  A  +Q     R+S   
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDA--IQCFRLVRNS--- 182

Query: 378 THTFTILI--CGMCRNGMVDDAQKL-----FNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
              F I    CG   + M++    +     ++++ + G  P V  +N LI+  CK G + 
Sbjct: 183 --NFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIR 240

Query: 431 KANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
            A L+F ++ + G  PT                S  T++   C +  + + +++   + E
Sbjct: 241 DAKLIFNEIRKRGLRPT--------------TVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           +   PD+ TY+ LI+G CK G ++ A +LF E+Q +GLRP+ +T+  LI+G  R  R + 
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--I 607
           A   + QM   G  P   +Y +L+   C+    + A  L +  +R +  + D+   +  I
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL-VDEMRMVGMKPDKITYTTLI 405

Query: 608 EEFLQKGEVENAIQ---GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           + + ++G++E+A++   G+ E    L++     +T  + G C+DG+V++A      +VE 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDN---VAFTALISGFCRDGRVRDAERTLREMVEA 462

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
                  +   +I G CK+G + +   +      NG   +P V  Y +      K  +  
Sbjct: 463 GMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH--KPGVITYNVLMNGLCKQGQMK 520

Query: 725 HAYHLLCRMKSVGYDLDACLY 745
           +A  LL  M ++G   D   Y
Sbjct: 521 NANMLLEAMLNLGVTPDDITY 541


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 180/717 (25%), Positives = 323/717 (45%), Gaps = 43/717 (5%)

Query: 43  NPQVGFRFFIWAAKRKR----LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV- 97
           NP+    FF  A+        LRS+     +I +LL  N        L  L +GNV V+ 
Sbjct: 118 NPKTALDFFRLASDSFSFSFSLRSYC---LLIGLLLDANLLSAARVVLIRLINGNVPVLP 174

Query: 98  ---SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
               D    +      +  C    +   + K  D   +VY         F++    LAL 
Sbjct: 175 CGLRDSRVAIADAMASLSLC---FDEEIRRKMSDLLIEVYC------TQFKRDGCYLALD 225

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+  +      P+  T ++L+  L ++ + +   +  D +  +G+ P+ + +T  I+  C
Sbjct: 226 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFC 284

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  + +EA +LF KM+++G +P+ V +N +++G     R DEA        + G  P L 
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +YS L+ GL RAKR  +AY   ++M ++   P+V++Y  +I    EAG +  A+++   M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G+   +  YN LIKG+C  G  D A  L  E+       N  +FT +IC +C + M 
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           D A +   +M      P  G+   LI GLCK G+  KA  L+++            L++G
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-----------LNKG 513

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V D  +   ++   C AG + +A++I  ++   G + D ++YN+LI+G C    ++ 
Sbjct: 514 --FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A     E+  +GL+PD+ TY  LI GL  +++ E+A + +    +NG  P    Y  ++ 
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631

Query: 575 WSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             C+  +       + + + +++          I  + + G +  A++   +M  K    
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 691

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAM 690
             A YT  + G+    +V+EA  +F    E +     P+      LI G  K G + + +
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFE---EMRMEGLEPNVFHYTALIDGYGKLGQM-VKV 747

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
           +  L  + +  +  P    Y +    +++D     A  LL  M+  G   D+  Y +
Sbjct: 748 ECLLREMHSKNV-HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 803



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 250/534 (46%), Gaps = 39/534 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMK--TKNPQVGFRFFIWAAKRKRLRSFASNSAV----IS 71
           +E  +EP L         S+++K  T+  ++G  +F+     K+   F  N  V    I 
Sbjct: 335 VERGMEPTL------ITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLID 386

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
             ++    +   +  D + S  +S+ S  +  LI GY K G  + A     +M       
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +   + +V+ +     +F  AL    EM+  N  P     + LI+GL K GK   A+++ 
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +   +G + +  T   ++ GLC+  + DEA+R+  ++   GC  D V+YN L++G C  
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           +++DEA   L    K G  P   +YS LI GLF   + +EA  ++       + PDV  Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            VMI G  +A + ++  +   +M  + + P+T  YN LI+ +C  G L  A  L+ ++  
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +   PN+ T+T LI GM     V++A+ LF +M   G  P+V  + ALIDG  K G++ K
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
              L  +M   KN             VH +K +   M+  Y   G + +A ++L ++ E 
Sbjct: 747 VECLLREMH-SKN-------------VHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           G +PD ITY   I G+ K G   G L+ FK         D   Y  +I G  ++
Sbjct: 793 GIVPDSITYKEFIYGYLKQG---GVLEAFKG-------SDEENYAAIIEGWNKL 836



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 248/562 (44%), Gaps = 58/562 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ L++ N F    +  D +  G VS    +F   I+ + K G  E+A++ F KM+E  
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 303

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P+V  +N V++       +  A     +MV+    P ++T+S+L+ GL+++ +   A 
Sbjct: 304 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 363

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L EMT++G  PN   Y  +I    +    ++A  +   M   G S     YN L+ G+
Sbjct: 364 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 423

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  + D A  LL+     GF    GS++ +I  L     +D A  +  +M    + P  
Sbjct: 424 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 483

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            L   +I GL + GK   A++L      +G V DT   NAL+ G C+ G LD+A  +Q E
Sbjct: 484 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 543

Query: 369 IW-----------------------------------KRDSLPNTHTFTILICGMCRNGM 393
           I                                    KR   P+ +T++ILICG+     
Sbjct: 544 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 603

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLR 450
           V++A + ++  ++ G  P V  ++ +IDG CKA   E+    F +M    +  N  ++  
Sbjct: 604 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 663

Query: 451 LSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           L +   R                     + A+  ++++       + +A  +  ++   G
Sbjct: 664 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 723

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++  Y +LI+G+ K+G +     L +E+  K + P+ +TY  +I G  R     +A 
Sbjct: 724 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 783

Query: 552 RIFGQMPQNGCTPSPAVYKSLM 573
           R+  +M + G  P    YK  +
Sbjct: 784 RLLNEMREKGIVPDSITYKEFI 805


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 265/584 (45%), Gaps = 56/584 (9%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVIS--MLLKPNGFDLYWQTLDEL 89
           + + + +++++N ++ F F+    +     +F S S ++   + ++  GF      L   
Sbjct: 76  SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R    +V +    +L+ G  +  +C KA+    +M+     PDV+ YN V+      +  
Sbjct: 136 RGFAFNVYN--HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             AL +  EM    C  ++VT+ +LI+   K+GK + A+  L EM   G+  +   YT +
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G C     D    LF ++ + G SP  + YN L+ GFCKL ++ EA  +     + G 
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + +Y+ LIDGL    +  EA      M E+  EP+ V Y ++I  L + G V DA++
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICG 387
           ++  M++R   PD   YN L+ G C  G LD+A  L   + K  S   P+  ++  LI G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433

Query: 388 MCRN-----------------------------------GMVDDAQKLFNKMEKAGCFPS 412
           +C+                                    G V+ A +L+ ++  +    +
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              + A+IDG CK G L  A  L  KM + +  P++F                  ++   
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF--------------DYNCLLSSL 539

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A+++  ++    N PD++++N +I+G  K G+I  A  L   +   GL PD 
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            TY  LIN   ++   ++A   F +M  +G  P   +  S++ +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 273/574 (47%), Gaps = 32/574 (5%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           LA + Y +M++ +   N V+ S L+    +  KT  A  +L  M +RG   N + + I++
Sbjct: 90  LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILL 149

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
            GLC+     +A  L  +M+ +   PD  +YN ++ GFC+ + +++AL L    +  G  
Sbjct: 150 KGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCS 209

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
             L ++  LID   +A + DEA  + ++M    +E D+V+Y  +IRG  + G++     L
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             ++ ERG  P    YN LI+GFC LG L +A  +   + +R   PN +T+T LI G+C 
Sbjct: 270 FDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG 329

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G   +A +  N M +    P+   +N +I+ LCK G +  A      +EI       + 
Sbjct: 330 VGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA------VEI-------VE 376

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL--PDIITYNSLINGFCK 508
           L +      D  +   ++   C  G + +A K+L  + +  +   PD+I+YN+LI+G CK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              ++ AL ++  L  K    D VT   L+N   +      A  ++ Q+  +    +   
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF-------LQKGEVENAIQ 621
           Y +++   C+    ++A  L  +       R  E   S+ ++        ++G ++ A +
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKM------RVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550

Query: 622 GLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP--SCVKLIHG 679
              EM    N   +  + I + G  + G +K A ++   +   +A ++P   +  KLI+ 
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM--SRAGLSPDLFTYSKLINR 608

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
             K GYLD A+  F   + +GF     +C+ +L+
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 211/443 (47%), Gaps = 17/443 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI G+   G+ ++    F ++ E    P    YN ++    +      A  ++  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++    PN+ T++ LI+GL   GKT+ A++ L+ M ++   PN  TY I+I+ LC+    
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYS 277
            +A  +   MK     PD + YN LL G C    +DEA  LL    KD     P + SY+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI GL +  R  +A   Y  + E+    D V   +++    +AG V  AM+L   + + 
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            IV ++  Y A+I GFC  G+L+ A+ L  ++   +  P+   +  L+  +C+ G +D A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGN 456
            +LF +M++   FP V  FN +IDG  KAG+++ A  L   M   G +P LF        
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF-------- 600

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +   ++ ++   G + +A     ++ +SG  PD    +S++      G  +   
Sbjct: 601 ------TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 517 KLFKELQLKGLRPDSVTYGTLIN 539
           +L K+L  K +  D     T+++
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMD 677



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PDV  YNA+++   ++     AL +Y  +V+     + VT ++L+N   K+G    A++
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +  +++   I+ N  TYT +I G C+    + A  L  KM+ S   P    YN LL+  C
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K   +D+A  L    ++D   P + S++ +IDG  +A     A +    M    + PD+ 
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I    + G + +A+     M + G  PD +  ++++K     G  D+   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 370 WKRDSLPNTHTFTILICGMCRNGM-VDDAQKLF 401
             +D + +      ++  MC +   +D A++L 
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/599 (25%), Positives = 273/599 (45%), Gaps = 39/599 (6%)

Query: 21  ALEPLLPFLSKTTVTSVIMKTKNPQVG-FRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
           AL  LL  +++  V+S +       V  F     A  +K     A+   +IS        
Sbjct: 101 ALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCL 160

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE-SFGKMKEFDCQPDVYIYNA 138
           +L +  L ++    +   +  F  L+           A+     +M E  C PDV+ Y  
Sbjct: 161 NLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTT 220

Query: 139 VLNIAFRKQLFLLALAVYYEMVKL--NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           +L     ++    A  + + M +   NC PN+V+++ +I+G  K G    A  +  +M  
Sbjct: 221 LLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLD 280

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            GI PN  T   VI GLC++   D+A  +  +M D    P+   YN+L++G+    +  E
Sbjct: 281 HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTE 340

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+ +L+   +DG  P + +YS LID L ++  + EA   +  M +   +P+   YG ++ 
Sbjct: 341 AVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G +  G + D   +   M + G+ P  + +N  I  +C  G LD+A     ++ ++  +P
Sbjct: 401 GYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMP 460

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +   +T +I G+C+ G +DDA   F +M   G  P +  FN LI G    G+ EKA  LF
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELF 520

Query: 437 YK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           Y+ M+ G  P +               +  +M+++    G + +A K+   +  +G  P+
Sbjct: 521 YEMMDRGIPPNV--------------NTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPN 566

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           +++YN++I+G+   G +   +KL  ++ L GL+P +VT+ TL++G               
Sbjct: 567 VVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG--------------- 611

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            M   G  P     K+L+   C   +     +L+    R++ G+ D++    E    +G
Sbjct: 612 -MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLF----REMLGKADKTDTITENIKLRG 665



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/589 (25%), Positives = 273/589 (46%), Gaps = 56/589 (9%)

Query: 109 YKVGDC--EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF-------LLALAVYYEM 159
           Y+ GD   E AL+ F ++ +      +Y  N +L    R  +         LA++++  M
Sbjct: 73  YRSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRM 132

Query: 160 VKLNC---LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +       P+I TF +LI+    +G   +    L ++ + G+     T+T ++  LC  
Sbjct: 133 ARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAE 192

Query: 217 NRADEAYRLFLK-MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG--FVPRL 273
            R  +A  + L+ M + GC+PD  +Y  LL G C  ++ +EA  L+    +DG    P +
Sbjct: 193 KRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV 252

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            SY+ +I G F+     +AY  + KM +  I P+VV    +I GL +   +  A  +L  
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M +  I+P+   YN+LI G+   G   +A  +  E+ +    PN  T+++LI  +C++G+
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLS 452
             +A+++FN M ++G  P+   + +L+ G    G L +  N+    ++ G  P       
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRP------- 425

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
             G  V         +  YC  G + +A     ++ + G +PDI+ Y ++I+G CK+G +
Sbjct: 426 --GRHV-----FNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A+  F ++   GL PD +T+ TLI+G     + E A  +F +M   G  P+   + S+
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538

Query: 573 MTWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGE 615
           +    +  K + A  L+    R                  I+G   E MK +++ L  G 
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598

Query: 616 VENAI------QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
              A+       G++ M  K +   +      +   C+DG++++ L +F
Sbjct: 599 KPTAVTFNTLLDGMVSMGLKPD---VVTCKTLIDSCCEDGRIEDILTLF 644



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 199/475 (41%), Gaps = 60/475 (12%)

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + ++  LI     A   +  +A   ++ +  +    V +  ++R L    +  DAM 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 330 L-LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS---LPNTHTFTILI 385
           + L  M E G  PD + Y  L+KG C     ++A  L + +   D     PN  ++T +I
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAEL-IHMMAEDGDNCPPNVVSYTTVI 259

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIG 442
            G  + G V  A  LF KM   G  P+V   N++IDGLCK   ++KA  +  +M    I 
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
            N T +                 +++  Y ++G   +A +IL +++  G  P+++TY+ L
Sbjct: 320 PNCTTY----------------NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSML 363

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           I+  CK G    A ++F  +   G +P++ TYG+L++G        D   +   M QNG 
Sbjct: 364 IDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM 423

Query: 563 TPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
            P   V+   +   C+                   GR DE+  +  +  Q+G + +    
Sbjct: 424 RPGRHVFNIEIYAYCK------------------CGRLDEASLTFNKMQQQGFMPD---- 461

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
                       +  YT  + GLC+ G++ +A++ F  +++        +   LIHG   
Sbjct: 462 ------------IVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFAL 509

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            G  + A ++F   +  G        N ++  L   K+ K   A  L   M   G
Sbjct: 510 HGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLF--KEGKVTEARKLFDLMPRAG 562



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 19/239 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF + I  Y K G  ++A  +F KM++    PD+  Y  V++   +      A++ + +M
Sbjct: 429 VFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM 488

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     P+I+TF+ LI+G +  GK E A ++  EM  RGI PN  T+  +I  L +  + 
Sbjct: 489 IDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKV 548

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +LF  M  +G  P+ V+YN +++G+     V E + LL      G  P   +++ L
Sbjct: 549 TEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 608

Query: 280 IDGLF-------------------RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           +DG+                       R ++    +R+M  +  + D +   + +RG++
Sbjct: 609 LDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVT 667



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/395 (22%), Positives = 159/395 (40%), Gaps = 64/395 (16%)

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---SLQVEIWKRDS------- 374
           +DA+ L  ++ +R      Y  N L+       +    R   +L V ++ R +       
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
            P+  TF ILI   C  G ++       ++ K G       F  L+  LC       A N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
           ++  +M E+G  P +F              S  T+++  C      +A +++  +AE G+
Sbjct: 201 IVLRRMPELGCTPDVF--------------SYTTLLKGLCAEKKCEEAAELIHMMAEDGD 246

Query: 493 --LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
              P++++Y ++I+GF K G++  A  LF ++   G+ P+ VT  ++I+GL +V   + A
Sbjct: 247 NCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKA 306

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
             +  QM      P+   Y SL                                  I  +
Sbjct: 307 EAVLQQMIDEHIMPNCTTYNSL----------------------------------IHGY 332

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
           L  G+   A++ L EM        +  Y++ +  LC+ G   EA  IF+ +++       
Sbjct: 333 LSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNA 392

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            +   L+HG    G L    +V    ++NG  +RP
Sbjct: 393 STYGSLLHGYATEGNLVDMNNVKDLMVQNG--MRP 425


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 222/469 (47%), Gaps = 22/469 (4%)

Query: 116 KALESFGKMK-------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           KAL S G++K       E    PDV  Y  +++    +     A+ +  EM       N 
Sbjct: 263 KALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             ++ +I  L   G+   A+++L++MT  G+  +   +T VISG C       A RLF +
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+  G + D V + AL+NG C+   + EA  +L+     G    + +Y+ LIDG  +   
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA+  + +M   ++ P+VV Y  +  GL + G V+ A +LL +M  +G+  + Y YN+
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G C  G L+QA  +  E+       + +T+T LI  +C++G  D A  +  +M   G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 409 CFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             PS+  +N L++G C +G +E    LL + +E    P +               +  ++
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVV--------------TYNSL 608

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++QYC    +    +I   +      P+  TYN LI G CK  N+  AL   +E+  KGL
Sbjct: 609 MKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           R  + +Y  LI  L +  +  +A   F +M   G T  P VY   M  S
Sbjct: 669 RLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 248/543 (45%), Gaps = 40/543 (7%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           + ++L  + Q G+ P+  +   V+S L      DEA  LF ++ D     +  ++N LL 
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLK 263

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
                 R+ +A    + F++    P + +Y  ++ G       + A     +M  + +E 
Sbjct: 264 ALLSAGRLKDAC---QHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +  +Y  +I  L   G+V DA+++L DM   G+  D   +  +I GFC  G L  AR L 
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ KR    +  T T LI G+CR G + +A ++  +M   G    V  +  LIDG CK 
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKR 440

Query: 427 GELEKANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           G + +A  +  +M    +  N   +  LS G                 C  G +  A ++
Sbjct: 441 GNMVEAFRVHNEMVGRRVAPNVVTYTALSDG----------------LCKQGDVRAANEL 484

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++   G   ++ TYNSLING CK GN+  A+++  E++  G R D  TY TLI+ L +
Sbjct: 485 LHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCK 544

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               + A  +  +M   G  PS A Y  LM   C   +      L L+++ + + R +  
Sbjct: 545 SGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL-LEWMLEKNVRPN-- 601

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFS 659
           + +    +++  ++  ++   E+   ++  ++AP    Y I + G C+   +KEAL    
Sbjct: 602 VVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQ 661

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN-GFILRPRVCNYLLRSLLFS 718
            ++E    +T  S   LI  L K+     A  VF   ++N G    P V ++ +  + F+
Sbjct: 662 EMIEKGLRLTASSYSALIRLLNKKKKFSEAR-VFFDKMRNEGLTAEPDVYSFYM-DISFN 719

Query: 719 KDN 721
           +DN
Sbjct: 720 EDN 722



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 162/355 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VIS            +  +E++   ++        LI+G  + G+ ++A     +M +
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVD 420

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                DV  Y  +++   ++   + A  V+ EMV     PN+VT++ L +GL K G    
Sbjct: 421 KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRA 480

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++L EM  +G+  N +TY  +I+GLC+    ++A R+  +M+ +G   D   Y  L++
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK    D A  +L+     G  P + +Y+ L++G   + R +        M E+ + P
Sbjct: 541 TLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP 600

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +VV Y  +++       +K   ++   M  + + P+   YN LIKG C    + +A    
Sbjct: 601 NVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFH 660

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            E+ ++       +++ LI  + +     +A+  F+KM   G      +++  +D
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMD 715


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 219/427 (51%), Gaps = 14/427 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+V  + ++ G  K G  E A ++++ M  +G+ PN  T+   IS LC+  R  +AYR+F
Sbjct: 206 NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIF 265

Query: 227 LKMKDSGCS----PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             M++        PD V ++ +L+GFC    VDEA  L+      GF+ R+ SY+  + G
Sbjct: 266 KDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSG 325

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L R  R  EA+   R+M  E+I P+   Y +++ GL + GK  DA ++ + +R   + PD
Sbjct: 326 LVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y +L+  +C  G +  A  +  E+ ++   PN+ T+ +L+  + R G   +A++L  
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------EIGKNPTLFLRL----S 452
           +M + G        N +IDGLC+  +L+ A  +   M       +G+    FL +    S
Sbjct: 446 RMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSS 505

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                + D+ +   ++   C  G   +A K L+++      PD + Y++ I+G+CK G  
Sbjct: 506 ISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKT 565

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A+K+ ++++ KG  P + TY  LI G +   + ++  ++  +M + G +P+   Y SL
Sbjct: 566 SLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSL 625

Query: 573 MTWSCRR 579
           +   C++
Sbjct: 626 IKSFCQQ 632



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 156/626 (24%), Positives = 269/626 (42%), Gaps = 122/626 (19%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P   +YN ++  A R+    L  A+Y +++     P++ T +LL+  L  +G+ E+A ++
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            + M  R    N+F++ I+  G C+  R+ +A    LK+ D   S + V  N ++ GFCK
Sbjct: 168 FEAMPVR----NEFSFGILARGYCRAGRSVDA----LKVLDGMPSMNLVVCNTVVAGFCK 219

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
                           +G V                   +EA     +M  + + P+VV 
Sbjct: 220 ----------------EGLV-------------------EEAERLVERMRVQGLAPNVVT 244

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRE---RGIV-PDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   I  L +AG+V DA ++  DM+E    G+  PD   ++ ++ GFCD G +D+AR L 
Sbjct: 245 FNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL- 303

Query: 367 VEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           V+I +    L    ++   + G+ RNG V +A +L  +M      P+   +N ++ GLCK
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCK 363

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G                                 KA     VE +  +G++        
Sbjct: 364 EG---------------------------------KAFDARRVENFIRSGVMS------- 383

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
                   PD++TY SL++ +C  GNI  A ++  E+  KG  P+S TY  L+  L R  
Sbjct: 384 --------PDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAG 435

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R  +A R+  +M + G +   A    ++   CR  K  +A  +       + G  +E   
Sbjct: 436 RTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGI-------VDGMWEEGST 488

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLA---PYTIWLIGLCQDGQVKEA-LNIFSVL 661
           ++      G + N+   ++  D  ++   L     Y+I +  LC++G+  EA   +  ++
Sbjct: 489 AL------GRLGNSFLSVVS-DSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMI 541

Query: 662 VECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           V+    ++P S +    IHG CK G   LA+ V     K G     R  N L+R   F +
Sbjct: 542 VK---DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRG--FEE 596

Query: 720 DNKKVHAYHLLCRMKSVGYDLDACLY 745
            +K      L+  M+  G   +   Y
Sbjct: 597 KHKSDEIMKLMSEMEEKGVSPNVLTY 622



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 156/332 (46%), Gaps = 23/332 (6%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D +R G      + +   +SG  + G   +A E   +M      P+ Y YN +++   +
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCK 363

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     A  V   +      P++VT++ L++     G    A ++LDEM Q+G  PN FT
Sbjct: 364 EGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFT 423

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y +++  L +  R  EA RL  +M + G S D    N +++G C+  ++D A+ ++    
Sbjct: 424 YNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMW 483

Query: 266 KDGFVP--RLG---------------------SYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           ++G     RLG                     +YS LI  L +  R+DEA     +M  +
Sbjct: 484 EEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVK 543

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
            I PD V+Y   I G  + GK   A+K+L DM ++G  P T  YN LI+GF +    D+ 
Sbjct: 544 DISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEI 603

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             L  E+ ++   PN  T+  LI   C+ GM+
Sbjct: 604 MKLMSEMEEKGVSPNVLTYNSLIKSFCQQGML 635



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 184/440 (41%), Gaps = 79/440 (17%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQ-----PDVYIYNAVLNIAFRKQLFLLALA 154
            F   IS   K G    A   F  M+E D Q     PD   ++ +L+  F    F+    
Sbjct: 244 TFNSRISALCKAGRVLDAYRIFKDMQE-DWQHGLPRPDQVTFDVMLS-GFCDAGFVDEAR 301

Query: 155 VYYEMVKLNC-LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           V  ++++    L  + +++  ++GL ++G+   A ++L EM    I PN +TY I++SGL
Sbjct: 302 VLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGL 361

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+  +A +A R+   ++    SPD V Y +LL+ +C    +  A  +L    + G  P  
Sbjct: 362 CKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNS 421

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+  L+RA R  EA     +M E+    D     ++I GL    K+  AM ++  
Sbjct: 422 FTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDG 481

Query: 334 MRERG-----------------------IVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           M E G                        +PD   Y+ LI   C  G  D+A+   +E+ 
Sbjct: 482 MWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMI 541

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
            +D  P++  +   I G C++G    A K+   MEK GC PS   +N LI G  +  + +
Sbjct: 542 VKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSD 601

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           +   L  +ME                                                E 
Sbjct: 602 EIMKLMSEME------------------------------------------------EK 613

Query: 491 GNLPDIITYNSLINGFCKVG 510
           G  P+++TYNSLI  FC+ G
Sbjct: 614 GVSPNVLTYNSLIKSFCQQG 633



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 24/292 (8%)

Query: 54  AAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD 113
           A +R    S+  N  V  +  +   FD   +  + +RSG +S     +  L+  Y   G+
Sbjct: 343 AHERIHPNSYTYNIIVSGLCKEGKAFDAR-RVENFIRSGVMSPDVVTYTSLLHAYCSKGN 401

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
              A     +M +  C P+ + YN +L   +R      A  +   M +     +    ++
Sbjct: 402 IAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNI 461

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRG-----------------------ILPNKFTYTIVI 210
           +I+GL ++ K +VA+ ++D M + G                        LP++ TY+I+I
Sbjct: 462 IIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILI 521

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           S LC+  R DEA +  L+M     SPD V Y+  ++G+CK  +   A+ +LR  EK G  
Sbjct: 522 SALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCN 581

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           P   +Y+ LI G     + DE      +M E+ + P+V+ Y  +I+   + G
Sbjct: 582 PSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 180/717 (25%), Positives = 323/717 (45%), Gaps = 43/717 (5%)

Query: 43  NPQVGFRFFIWAAKRKR----LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVV- 97
           NP+    FF  A+        LRS+     +I +LL  N        L  L +GNV V+ 
Sbjct: 94  NPKTALDFFRLASDSFSFSFSLRSYC---LLIGLLLDANLLSAARVVLIRLINGNVPVLP 150

Query: 98  ---SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
               D    +      +  C    +   + K  D   +VY         F++    LAL 
Sbjct: 151 CGLRDSRVAIADAMASLSLC---FDEEIRRKMSDLLIEVYC------TQFKRDGCYLALD 201

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+  +      P+  T ++L+  L ++ + +   +  D +  +G+ P+ + +T  I+  C
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFC 260

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  + +EA +LF KM+++G +P+ V +N +++G     R DEA        + G  P L 
Sbjct: 261 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 320

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +YS L+ GL RAKR  +AY   ++M ++   P+V++Y  +I    EAG +  A+++   M
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G+   +  YN LIKG+C  G  D A  L  E+       N  +FT +IC +C + M 
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           D A +   +M      P  G+   LI GLCK G+  KA  L+++            L++G
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-----------LNKG 489

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
              V D  +   ++   C AG + +A++I  ++   G + D ++YN+LI+G C    ++ 
Sbjct: 490 --FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 547

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A     E+  +GL+PD+ TY  LI GL  +++ E+A + +    +NG  P    Y  ++ 
Sbjct: 548 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 607

Query: 575 WSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             C+  +       + + + +++          I  + + G +  A++   +M  K    
Sbjct: 608 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 667

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAM 690
             A YT  + G+    +V+EA  +F    E +     P+      LI G  K G + + +
Sbjct: 668 NSATYTSLIKGMSIISRVEEAKLLFE---EMRMEGLEPNVFHYTALIDGYGKLGQM-VKV 723

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
           +  L  + +  +  P    Y +    +++D     A  LL  M+  G   D+  Y +
Sbjct: 724 ECLLREMHSKNV-HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 779



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 250/534 (46%), Gaps = 39/534 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMK--TKNPQVGFRFFIWAAKRKRLRSFASNSAV----IS 71
           +E  +EP L         S+++K  T+  ++G  +F+     K+   F  N  V    I 
Sbjct: 311 VERGMEPTL------ITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVIVYNNLID 362

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
             ++    +   +  D + S  +S+ S  +  LI GY K G  + A     +M       
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           +   + +V+ +     +F  AL    EM+  N  P     + LI+GL K GK   A+++ 
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
            +   +G + +  T   ++ GLC+  + DEA+R+  ++   GC  D V+YN L++G C  
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
           +++DEA   L    K G  P   +YS LI GLF   + +EA  ++       + PDV  Y
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            VMI G  +A + ++  +   +M  + + P+T  YN LI+ +C  G L  A  L+ ++  
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +   PN+ T+T LI GM     V++A+ LF +M   G  P+V  + ALIDG  K G++ K
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
              L  +M   KN             VH +K +   M+  Y   G + +A ++L ++ E 
Sbjct: 723 VECLLREMH-SKN-------------VHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 768

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           G +PD ITY   I G+ K G   G L+ FK         D   Y  +I G  ++
Sbjct: 769 GIVPDSITYKEFIYGYLKQG---GVLEAFKG-------SDEENYAAIIEGWNKL 812



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 248/562 (44%), Gaps = 58/562 (10%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ L++ N F    +  D +  G VS    +F   I+ + K G  E+A++ F KM+E  
Sbjct: 221 LLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 279

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P+V  +N V++       +  A     +MV+    P ++T+S+L+ GL+++ +   A 
Sbjct: 280 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 339

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L EMT++G  PN   Y  +I    +    ++A  +   M   G S     YN L+ G+
Sbjct: 340 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 399

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK  + D A  LL+     GF    GS++ +I  L     +D A  +  +M    + P  
Sbjct: 400 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 459

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            L   +I GL + GK   A++L      +G V DT   NAL+ G C+ G LD+A  +Q E
Sbjct: 460 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 519

Query: 369 IW-----------------------------------KRDSLPNTHTFTILICGMCRNGM 393
           I                                    KR   P+ +T++ILICG+     
Sbjct: 520 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 579

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLR 450
           V++A + ++  ++ G  P V  ++ +IDG CKA   E+    F +M    +  N  ++  
Sbjct: 580 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 639

Query: 451 LSQGGNRVH-------------------DKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           L +   R                     + A+  ++++       + +A  +  ++   G
Sbjct: 640 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 699

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             P++  Y +LI+G+ K+G +     L +E+  K + P+ +TY  +I G  R     +A 
Sbjct: 700 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 759

Query: 552 RIFGQMPQNGCTPSPAVYKSLM 573
           R+  +M + G  P    YK  +
Sbjct: 760 RLLNEMREKGIVPDSITYKEFI 781


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 237/525 (45%), Gaps = 18/525 (3%)

Query: 65  SNSAV---ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S+SA+     +LL+       W+ L  +        +  F  +I G+ + G  +      
Sbjct: 113 SSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLL 172

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M++F CQPDVY YN ++N    +     AL     M+   C P++VTF  +IN     
Sbjct: 173 CVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQ 232

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G    A  + D M + G +PN   Y  +++G  +     +A  L+ +MK    +PD   +
Sbjct: 233 GNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTF 292

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+ G  +  R ++   LLR   + G +     Y+  + GL  A   DEA  +   M E
Sbjct: 293 NILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLE 352

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + I P VV +  +I   S AG  + A K    M + G+ P +   ++LI G   L  L +
Sbjct: 353 KGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQE 412

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           AR L  E+       N   FT+L+ G  R G V  A  L+N+ME  G  P    F+A I+
Sbjct: 413 ARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFIN 472

Query: 422 GLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GL   G +++A  +F +M + G  P  F+                +++  +C +G + +A
Sbjct: 473 GLSIVGLVDEAYDVFLQMSKKGFMPNNFV--------------YNSLIRGFCNSGRLQEA 518

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
             +  ++A  G LPDI T N +ING CK G +  A  +F+ +   GL PD VTY TLI+G
Sbjct: 519 LMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDG 578

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
             +         +  +M   G  P    Y   +   C  RK S A
Sbjct: 579 YCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRA 623



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/668 (25%), Positives = 283/668 (42%), Gaps = 59/668 (8%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSD--VFFVLISGYYKVGDCEKALESFGKMKE 126
           V+S +++  G D   + ++ +   +    SD  V   L+ G+ KV    +ALE  G+M+E
Sbjct: 48  VVSWVIRRVGVDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMRE 107

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P       +  +  R         +   M+     P    F+ +I G  + G  +V
Sbjct: 108 VGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKV 167

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              +L  M +    P+ + Y I+I+  C   +  +A      M D+GC+P  V +  ++N
Sbjct: 168 GESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVIN 227

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC    + EA  L    ++ G +P +  Y+ L++G  +A+   +A   Y +M  + + P
Sbjct: 228 AFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAP 287

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D   + +++ G    G+ +D  +LL D+ + G +  +  YN  + G C  G LD+A    
Sbjct: 288 DCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFL 347

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ ++   P    F  +I    R G+ + A K +  M K G FPS    ++LI GL K 
Sbjct: 348 EDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKL 407

Query: 427 GELEKANLLFYKMEIGK---NPTLFLRLSQG------------------GNRVH-DKASL 464
             L++A  L Y+M +     N   F  L  G                  G  +H D  + 
Sbjct: 408 WRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAF 467

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
              +      GL+ +AY + +Q+++ G +P+   YNSLI GFC  G +  AL L +E+  
Sbjct: 468 SAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMAR 527

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           KGL PD  T   +INGL +  R + A  +F  M   G  P    Y +L+   C+      
Sbjct: 528 KGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCK------ 581

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
           AF                   S +E + K            M     D  +  Y I L G
Sbjct: 582 AF----------------DTVSTDEVVNK------------MYATGWDPDITTYNIRLHG 613

Query: 645 LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
           LC   ++  A+ +   L+    +    +   +++G+C    L+ AM V    LK  F+  
Sbjct: 614 LCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCT-DVLERAMIVTAKLLKMAFVPN 672

Query: 705 PRVCNYLL 712
               N LL
Sbjct: 673 VVTANLLL 680



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 238/560 (42%), Gaps = 40/560 (7%)

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
           ++R+ E    F+  + +    DF   + L+ GF K+    EAL ++    + G  P   +
Sbjct: 58  VDRSREVVE-FMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSA 116

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
            + L   L R   +   +   R M  +   P    +  +I G    G VK    LL  M+
Sbjct: 117 ITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQ 176

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           +    PD Y YN LI  +C  G    A      +      P+  TF  +I   C  G + 
Sbjct: 177 KFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMM 236

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLS 452
           +A+ LF+ M++AG  P+V  +N L++G  KA ++ +AN+L+ +M+   +  + T F  L 
Sbjct: 237 EARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILV 296

Query: 453 QGG---NRVHDKASL----------------QTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            G     R  D+  L                   V   C AG + +A K L  + E G  
Sbjct: 297 AGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGIT 356

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P ++ +NS+I  + + G    A K ++ +   GL P S+T  +LI GL ++ R ++A  +
Sbjct: 357 PTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDL 416

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD-DESMKSIEEFLQ 612
             +M   G   + A +  L+    R    + A+SLW     ++ GR       +   F+ 
Sbjct: 417 LYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLW----NEMEGRGIHPDAVAFSAFIN 472

Query: 613 K----GEVENAIQGLLEMD---FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                G V+ A    L+M    F  N+F    Y   + G C  G+++EAL +   +    
Sbjct: 473 GLSIVGLVDEAYDVFLQMSKKGFMPNNF---VYNSLIRGFCNSGRLQEALMLEREMARKG 529

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +    +   +I+GLCK G +  A DVF      G I  P +  Y      + K    V 
Sbjct: 530 LLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLI--PDIVTYNTLIDGYCKAFDTVS 587

Query: 726 AYHLLCRMKSVGYDLDACLY 745
              ++ +M + G+D D   Y
Sbjct: 588 TDEVVNKMYATGWDPDITTY 607



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 1/363 (0%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           +S L      D   + L+++    ++     F  +I+ Y + G  EKA +++  M +F  
Sbjct: 331 VSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGL 390

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            P     ++++    +      A  + YEM+      N   F+LL++G  + G    A  
Sbjct: 391 FPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYS 450

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + +EM  RGI P+   ++  I+GL  +   DEAY +FL+M   G  P+   YN+L+ GFC
Sbjct: 451 LWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFC 510

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
              R+ EAL L R   + G +P + + + +I+GL +  R   A   +R M    + PD+V
Sbjct: 511 NSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIV 570

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y  +I G  +A       ++++ M   G  PD   YN  + G C    + +A  +  E+
Sbjct: 571 TYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEEL 630

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
                +P+T T+  ++ G+C + +++ A  +  K+ K    P+V   N L+   CK G  
Sbjct: 631 ISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMP 689

Query: 430 EKA 432
           EK 
Sbjct: 690 EKT 692


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/575 (27%), Positives = 261/575 (45%), Gaps = 41/575 (7%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           +E   + L P L  TT+ S++   K P + F F +      RL  F +    I+++ K +
Sbjct: 62  VEHVADKLTPSLVSTTLLSLV---KTPNLAFNF-VNHIDLYRL-DFQTQCLAIAVISKLS 116

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGD------------------CEKALE 119
                 Q L E+ +   + + ++F  L+  + ++                     ++A+E
Sbjct: 117 SPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIE 176

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
            F  MKE    P     N +L +  R      A   Y +M ++    N+ TF+++IN L 
Sbjct: 177 CFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLC 236

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           K GK + A   L  M   GI P   TY  ++ G     R + A  +  +MK  G  PD  
Sbjct: 237 KEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQ 296

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN +L+  C   R  E   +LR  ++ G VP   SY+ LI G       + A+A+  +M
Sbjct: 297 TYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
            ++ + P    Y  +I GL    K++ A  L+ ++RE+GIV D+  YN LI G+C  G  
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A +L  E+      P   T+T LI  +CR     +A +LF K+   G  P + M N L
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473

Query: 420 IDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +DG C  G +++A  L  +M+ +  NP              D  +   ++   C  G   
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINP--------------DDVTYNCLMRGLCGEGKFE 519

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A +++ ++   G  PD I+YN+LI+G+ K G+   A  +  E+   G  P  +TY  L+
Sbjct: 520 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            GL +    E A  +  +M   G  P+ + + S++
Sbjct: 580 KGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 216/505 (42%), Gaps = 64/505 (12%)

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           + ++ L+   C+LR VDEA+      ++ GF P+  + + ++  L R  R + A+ +Y  
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M+  +I+ +V  + +MI  L + GK+K A   L  M   GI P    YN L++GF   G 
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           ++ AR +  E+  +   P+  T+  ++  MC  G    A ++  +M++ G  P    +N 
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNI 332

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKN---PTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           LI G    G+LE A    Y+ E+ K    PT +              +  T++       
Sbjct: 333 LIRGCSNNGDLEMA--FAYRDEMVKQGMVPTFY--------------TYNTLIHGLFMEN 376

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I  A  ++ ++ E G + D +TYN LING+C+ G+   A  L  E+   G++P   TY 
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +LI  L R ++  +A  +F ++   G  P   +  +LM   C       AFSL       
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL------- 489

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
                                      L EMD    +     Y   + GLC +G+ +EA 
Sbjct: 490 ---------------------------LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 656 NIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            +     E K     P  +    LI G  K+G    A  V    L  GF       N LL
Sbjct: 523 ELMG---EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579

Query: 713 RSLLFSKDNKKVHAYHLLCRMKSVG 737
           + L  SK+ +   A  LL  MKS G
Sbjct: 580 KGL--SKNQEGELAEELLREMKSEG 602



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 150/308 (48%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A E   +MKE    PD   YN ++          +A A   EMVK   +P   T++ LI
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL    K E A  ++ E+ ++GI+ +  TY I+I+G CQ   A +A+ L  +M   G  
Sbjct: 370 HGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    Y +L+   C+  +  EA  L       G  P L   + L+DG       D A++ 
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            ++M    I PD V Y  ++RGL   GK ++A +L+ +M+ RGI PD   YN LI G+  
Sbjct: 490 LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G    A  ++ E+      P   T+  L+ G+ +N   + A++L  +M+  G  P+   
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609

Query: 416 FNALIDGL 423
           F ++I+ +
Sbjct: 610 FCSVIEAM 617



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 147/305 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L E++   +   S  + +LI G    GD E A     +M +    P  Y YN +++  
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           F +     A  +  E+ +   + + VT+++LING  + G  + A  + DEM   GI P +
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           FTYT +I  LC+ N+  EA  LF K+   G  PD V  N L++G C +  +D A +LL+ 
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +     P   +Y+CL+ GL    +++EA     +M    I+PD + Y  +I G S+ G 
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            K A  +  +M   G  P    YNAL+KG       + A  L  E+     +PN  +F  
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612

Query: 384 LICGM 388
           +I  M
Sbjct: 613 VIEAM 617



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 130/275 (47%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVL 104
           ++ F +     K+  + +F + + +I  L   N  +     + E+R   + + S  + +L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           I+GY + GD +KA     +M     QP  + Y +++ +  RK     A  ++ ++V    
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P++V  + L++G    G  + A  +L EM    I P+  TY  ++ GLC   + +EA  
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  +MK  G  PD ++YN L++G+ K      A  +       GF P L +Y+ L+ GL 
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + +  + A    R+M  E I P+   +  +I  +S
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 148/360 (41%), Gaps = 52/360 (14%)

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  ++ L++  C L ++D+A      + ++   P T T   ++  + R   +++A   + 
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
            M +     +V  FN +I+ LCK G+L+KA      ME+ G  PT+              
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTI-------------- 260

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+V+ +   G I  A  I+ ++   G  PD+ TYN +++  C  G  +  L+  KE
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKE 320

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   GL PDSV+Y  LI G       E AF    +M + G  P+   Y +L+       K
Sbjct: 321 I---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
              A  L                  I E  +KG V +++                 Y I 
Sbjct: 378 IEAAEIL------------------IREIREKGIVLDSVT----------------YNIL 403

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G CQ G  K+A  +   ++      T  +   LI+ LC++     A ++F   +  G 
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 71/139 (51%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D  +  L E+   +++     +  L+ G    G  E+A E  G+MK    +PD   YN 
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   +K     A  V  EM+ L   P ++T++ L+ GLSK+ + E+A ++L EM   G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602

Query: 199 ILPNKFTYTIVISGLCQIN 217
           I+PN  ++  VI  +  ++
Sbjct: 603 IVPNDSSFCSVIEAMSNLD 621


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 208/404 (51%), Gaps = 16/404 (3%)

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           VY  MV+         + +LI+ L K G  + A K+L  M  +        Y+ +I+ LC
Sbjct: 32  VYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLC 91

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           ++NR +EA  L  KM      PD + Y  ++   CK +R+D+ALA +      G  P   
Sbjct: 92  KLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF 150

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
            Y+ ++ GL + ++ +EA   + KM +++I P+VV Y  +I GL +A +++ A +L  +M
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             +G VP    YN LI GFC    L  A+ +  ++ + + +PN  T+T LI G+ ++G V
Sbjct: 211 AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKV 270

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQ 453
             A ++ + M K G  P+V  ++ LIDG CK   +++A+ L  +M   G  PT+      
Sbjct: 271 QAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV----- 325

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   ++   C A  +  A+K+   +A+    P ++TYN+L+   C    ++
Sbjct: 326 ---------TYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           GA +L+ E+  KG  PD++TY TL  GL R  +  +A  +  +M
Sbjct: 377 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 208/416 (50%), Gaps = 17/416 (4%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P   TF+ + +G +K+G+ E   ++   M + G       Y I+IS LC++   DEAY+
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L   M+        +AY+ ++N  CKL RV+EA  L+    +    P   +Y  +++ L 
Sbjct: 67  LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLC 125

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           + KR D+A A   +M    I+PD  +Y  ++ GL +  KV++A  L   M ++ I P+  
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVV 185

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YN LI G C    ++ A  L  E+  +  +P   ++  LI G C+   +  A+ +F+KM
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKAS 463
            ++ C P+V  +  LIDGL K+G+++ A  +   M + G  P +              A+
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV--------------AT 291

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +++ +C    + +A+K+L Q+   G  P ++TYN L+N  C+   +  A KLF+ + 
Sbjct: 292 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 351

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            +   P  VTY TL+  L    + + A R++ +M   GC P    Y +L  W   R
Sbjct: 352 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL-AWGLTR 406



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 204/400 (51%), Gaps = 14/400 (3%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  R ++P   T+  V  G  +  R ++   ++  M ++G +     Y  L++  CK+  
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
            DEA  LL +     F  +  +YS +I+ L +  R +EA     KM      PD + YG 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++  L +  ++ DA+  + +M  RGI PD + YN ++ G C    +++AR L  ++ K+ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             PN  T+  LI G+C+   ++ A +LF +M   G  P+   +N LIDG CK  +L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            +F KM         +R     N V +  +  T+++    +G +  A ++L  + + G  
Sbjct: 240 DVFDKM---------VR----SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P++ TY+ LI+GFCKV  ++ A KL +++  +G+ P  VTY  L+N L R D+ EDAF++
Sbjct: 287 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 346

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           F  M Q  C P+   Y +L+   C  ++   A  L+ + +
Sbjct: 347 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMI 386



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 207/429 (48%), Gaps = 49/429 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +LIS   KVG+ ++A +    M+    +     Y+ ++N   +      A  +  +M 
Sbjct: 48  YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA 107

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +    P+ +T+  ++  L K+ + + A+  ++EM  RGI P+ F Y  V+SGLCQ  + +
Sbjct: 108 RY-APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  LF KM     +P+ V YN L+NG CK  R++ A  L +     G+VP   SY+ LI
Sbjct: 167 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DG  + K    A   + KM      P+VV Y  +I GLS++GKV+ A ++L  M ++G+ 
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y+ LI GFC +  +D+A  L  ++  +   P   T+ IL+  +CR   ++DA KL
Sbjct: 287 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 346

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
           F  M +  C P+V  +N L+  LC   +L+ A+ L+ +M I K                 
Sbjct: 347 FRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEM-IAK----------------- 388

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                                         G  PD ITY++L  G  + G ++ A +L +
Sbjct: 389 ------------------------------GCPPDAITYDTLAWGLTRAGKVHEAQELME 418

Query: 521 ELQLKGLRP 529
           +++L    P
Sbjct: 419 KMKLTKRNP 427



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 190/387 (49%), Gaps = 4/387 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS L K   FD  ++ L  +R       +  +  +I+   K+   E+A E   KM  + 
Sbjct: 51  LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY- 109

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             PD   Y  ++    + +    ALA   EM      P+   ++ +++GL +  K E A 
Sbjct: 110 APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 169

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + ++M ++ I PN  TY  +I+GLC+  R + AY LF +M   G  P  V+YN L++GF
Sbjct: 170 LLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK + +  A  +     +   VP + +Y+ LIDGL ++ +   A      M ++ + P+V
Sbjct: 230 CKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 289

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  +I G  +  +V +A KLL  M  +GI P    YN L+   C    L+ A  L   
Sbjct: 290 ATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 349

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           + +R   P   T+  L+  +C +  +D A +L+ +M   GC P    ++ L  GL +AG+
Sbjct: 350 MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGK 409

Query: 429 LEKANLLFYKMEIGK-NPTLFLRLSQG 454
           + +A  L  KM++ K NP  F R SQG
Sbjct: 410 VHEAQELMEKMKLTKRNP--FGRSSQG 434



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 182/418 (43%), Gaps = 27/418 (6%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M  R ++P    +N +  GF   G L+Q + +   + +         + ILI  +C+ G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
            D+A KL + M           ++ +I+ LCK   +E+A  L  KM     P        
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPP-------- 112

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                 D  +   +VE+ C    I  A   + ++A  G  PD   YN +++G C+   + 
Sbjct: 113 ------DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 166

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            A  LF+++  + + P+ VTY TLINGL +  R E A+ +F +M   G  P+   Y +L+
Sbjct: 167 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226

Query: 574 TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLND 632
              C+++    A  ++ + +R     +  +  ++ + L K G+V+ A + L  M  K   
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVT 286

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             +A Y+  + G C+  +V EA  +   +V      T  +   L++ LC+   L+ A  +
Sbjct: 287 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 346

Query: 693 FLYTLKNGFILR---PRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           F      G   R   P V  Y  LLR+L   K     H   L   M + G   DA  Y
Sbjct: 347 F-----RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH--RLYAEMIAKGCPPDAITY 397



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 74/166 (44%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ TT+   + K+   Q          K+    + A+ S +I    K    D   + L++
Sbjct: 255 VTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 314

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + +  ++     + +L++   +    E A + F  M +  C P V  YN +L      + 
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
              A  +Y EM+   C P+ +T+  L  GL+++GK   A +++++M
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 155/569 (27%), Positives = 267/569 (46%), Gaps = 23/569 (4%)

Query: 36  SVIMKTKNPQVGFRFFIWAAKRK-RLRSFASNSAVISMLLKPNGFDLYW--QTLDELRSG 92
           S  +    P V  + F    + K +      N+ +I ++  P+ F +    +  D++   
Sbjct: 139 SAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKI 198

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            VS+    F VL++GY   G  E AL    +M  EF+  PD   YN +L    +K     
Sbjct: 199 GVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSD 258

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
              +  +M +   +PN VT++ L+ G  K G  + A ++++ M Q  ILP+  TY I+I+
Sbjct: 259 VKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILIN 318

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G+C      E   L   MK     PD V YN L++G  +L    EA  L+   E DG  P
Sbjct: 319 GVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKP 378

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
              +++  +  L + ++ +E     +++ E     PD+V Y  +I+   + G +  A+++
Sbjct: 379 NQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           + +M ++GI  +T   N ++   C    +D+A +L     KR  + +  T+  LI G  R
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFR 498

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
              V+ A +++++M++    P+V  FN+LI GLC  G+ E A      ME       F  
Sbjct: 499 EEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELA------MEK------FDE 546

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
           L++ G  + D  +  +++  YC  G + KA++   +  +    PD  T N L+NG CK G
Sbjct: 547 LAESG-LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
               AL  F  L +     D+VTY T+I+   +  + ++A+ +  +M +    P    Y 
Sbjct: 606 MTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYN 664

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           S++T      K S A  L    L+  SG+
Sbjct: 665 SIITSLMEDGKLSEADEL----LKKFSGK 689



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 173/688 (25%), Positives = 310/688 (45%), Gaps = 50/688 (7%)

Query: 1   ESSTLNEVLTILDTV-TPIEPALEPLLPFLSKTTVTSVIMK---TKNPQVGFRFFIWAAK 56
           ES  L  + +IL +  T +   L P +P +++  ++S++      K P+    FF WA +
Sbjct: 8   ESQLLKTLTSILTSEKTHLLETLNPYIPQITQPLLSSLLSSPSLAKKPETLVSFFQWA-Q 66

Query: 57  RKRLRSFASNS-----AVISMLLKPNGF-DLYWQTLDELRSGNVSVV------------- 97
                +F S+S     +V+  LL  + F D     +  +R+ + S+              
Sbjct: 67  SSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLS 126

Query: 98  ----SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLA 152
                 +F + +S Y   G    AL+ F KM     +P++   N +L    R    F +A
Sbjct: 127 PPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIA 186

Query: 153 LA--VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIV 209
            A  V+ +MVK+    ++ TF++L+NG    GK E A+ ML+ M ++  + P+  TY  +
Sbjct: 187 SAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTI 246

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +  + +  R  +   L L MK +G  P+ V YN L+ G+CKL  + EA  ++   ++   
Sbjct: 247 LKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNI 306

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           +P L +Y+ LI+G+  A    E       M   K++PDVV Y  +I G  E G   +A K
Sbjct: 307 LPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKK 366

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ-ARSLQVEIWKRDSLPNTHTFTILICGM 388
           L+  M   G+ P+   +N  +K  C     ++  R ++  +      P+  T+  LI   
Sbjct: 367 LMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAY 426

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
            + G +  A ++  +M + G   +    N ++D LCK  ++++A+ L             
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNL------------- 473

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           L  +     + D+ +  T++  Y     + KA+++  ++      P + T+NSLI G C 
Sbjct: 474 LDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G    A++ F EL   GL PD  T+ ++I G  +  R E AF  + +  ++   P    
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 569 YKSLMTWSCRR--RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM 626
              L+   C+    + +L F   L   R++      +M  I  F +  +++ A   L EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTM--ISAFCKDKKLKEAYDLLSEM 651

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
           + K  +     Y   +  L +DG++ EA
Sbjct: 652 EEKRLEPDRFTYNSIITSLMEDGKLSEA 679



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 273/596 (45%), Gaps = 77/596 (12%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA---DEA 222
           P+   F + ++    +GK  VA+++  +M +  + PN  T   ++ GL +   +     A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             +F  M   G S D   +N L+NG+C   ++++AL +L                     
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLE-------------------- 228

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                         R + E  + PD V Y  +++ +S+ G++ D   LL DM+  G+VP+
Sbjct: 229 --------------RMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPN 274

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQKLF 401
              YN L+ G+C LG L +A  + VE+ K+ + LP+  T+ ILI G+C  G + +  +L 
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQI-VELMKQTNILPDLCTYNILINGVCNAGSIREGLELM 333

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHD 460
           + M+     P V  +N LIDG  + G   +A  L  +ME  G  P          N+V  
Sbjct: 334 DVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKP----------NQVTH 383

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             SL+ + ++     +  K  K L+++   G  PDI+TY++LI  + KVG+++GAL++ +
Sbjct: 384 NISLKWLCKEEKREEVTRKV-KELVEM--HGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E+  KG++ +++T  T+++ L +  + ++A  +     + G       Y +L+    R  
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREE 500

Query: 581 KFSLAFSLWLQYLR-DISGRDDESMKSIEEFLQKGEVENAIQ--------GLLEMDFKLN 631
           K   AF +W +  R  I+         I      G+ E A++        GLL  D   N
Sbjct: 501 KVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFN 560

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                     ++G C++G+V++A   ++  ++        +C  L++GLCK G  + A++
Sbjct: 561 SI--------ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            F     N  I    V      +++  F KD K   AY LL  M+    + D   Y
Sbjct: 613 FF-----NTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTY 663


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 242/505 (47%), Gaps = 64/505 (12%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRS--FASNSAVISMLLKPNGFD---LYWQTLDE 88
           V  VI +  +P   +  F WA K+ +     F  N+ ++S+ +K    +   L++Q+   
Sbjct: 72  VGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNN-LLSVYVKARRVEDAHLFFQS--- 127

Query: 89  LRSGNVSVVSDVFF-VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
               NV    +V +  L++G++K GD +KAL  FG+MK+      +  +N VL       
Sbjct: 128 -HMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGG 185

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
              +A  V+ +M  +   PN+++++++I+GL KS K + AI +  +M  + I P+  TY 
Sbjct: 186 KISMAWEVFKDMSGIFS-PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYG 244

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I GL +  R  EAY LF + +  GC P  V YN +++G CK  R++ AL L     ++
Sbjct: 245 ALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVRE 304

Query: 268 GFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
             + P + +YS LI+GL  + R ++AY  Y +M +    PDVV Y  ++ GL ++G    
Sbjct: 305 PHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDK 364

Query: 327 AMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           AM++   M    +  P+   Y  LI  FC +  L  A  L  E+  R  LP+  TFT +I
Sbjct: 365 AMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVI 424

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
             +C+   +D+A +LF  + K  C P   +FN ++ G CK   ++ A             
Sbjct: 425 QKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDA------------- 470

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                      ++HD+                         + +SG  P + TY +L+ G
Sbjct: 471 ----------KKLHDR-------------------------MLDSGCAPTLATYTALVTG 495

Query: 506 FCKVGNINGALKLFKELQLKGLRPD 530
           FC+ G  + AL ++ E+   G  P+
Sbjct: 496 FCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 217/434 (50%), Gaps = 51/434 (11%)

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           Q     N+FT   ++S   +  R ++A+  F     +   PD V+YN L+NGF K   V 
Sbjct: 95  QSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVK 154

Query: 256 EALALLRSFEKDG---------------------------------FVPRLGSYSCLIDG 282
           +ALAL    +  G                                 F P L SY+ +IDG
Sbjct: 155 KALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDG 214

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L ++++ D+A   +++M ++ I PDVV YG +I GL +  +VK+A  L  + R +G  P 
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLF 401
              YN +I G C  G ++ A +L  ++ +   L P+  T++ LI G+  +   + A +L+
Sbjct: 275 VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELY 334

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK--NPTLFLRLSQGGNRVH 459
            +M   GC P V  +N L+DGLCK+G  +KA  +F KM +G   +P +            
Sbjct: 335 EEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI----------- 383

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +   +++++C    +  A K+  ++     LPD +T+ ++I   CK   I+ A +LF
Sbjct: 384 ---TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +  K  +PDSV + T++ G  ++ R +DA ++  +M  +GC P+ A Y +L+T  CR 
Sbjct: 441 ESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRT 499

Query: 580 RKFSLAFSLWLQYL 593
            ++S A  ++ + +
Sbjct: 500 GRYSDALIMYHEMI 513



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 216/466 (46%), Gaps = 60/466 (12%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N LL+ + K RRV++A    +S  K+ F P   SY+ L++G F+A    +A A + +M +
Sbjct: 106 NNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKD 165

Query: 302 EKIEPDVVL--YGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGL 358
             I    VL  + +++RGL   GK+  A ++  DM   GI  P+   Y  +I G C    
Sbjct: 166 SGI---AVLRSHNIVLRGLCSGGKISMAWEVFKDMS--GIFSPNLISYTIMIDGLCKSRK 220

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +D+A +L  ++  +   P+  T+  LI G+ +   V +A  LF +    GC P+V  +N 
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 419 LIDGLCKAGELEKANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           +IDGLCK G +E A  L+  M  E    P +F              +   ++     +  
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMF--------------TYSALINGLNLSNR 326

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL-RPDSVTYG 535
             KAY++  ++ ++G  PD++TYN+L++G CK G  + A+++F+++ +  +  P+ +TY 
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYT 386

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            LI+   +VDR  DA ++  +M      P    + +++   C+                 
Sbjct: 387 VLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCK----------------- 429

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
              R DE+ +  E   +  + ++ +                 +   L G C+  ++ +A 
Sbjct: 430 -ESRIDEAHELFESIGKTCKPDSVL-----------------FNTMLAGYCKITRIDDAK 471

Query: 656 NIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            +   +++     T  +   L+ G C+ G    A+ ++   ++ GF
Sbjct: 472 KLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGF 517



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 166/352 (47%), Gaps = 39/352 (11%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S++ V+  L       + W+   ++ SG  S     + ++I G  K    +KA+  F +M
Sbjct: 173 SHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQM 231

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            +    PDV  Y A+++   +++    A  ++ E     C P +VT++ +I+GL K G+ 
Sbjct: 232 VDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRI 291

Query: 185 EVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           E A+ + D+M +   L P+ FTY+ +I+GL   NR ++AY L+ +M D+GCSPD V YN 
Sbjct: 292 ENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNT 351

Query: 244 LLNG------------------------------------FCKLRRVDEALALLRSFEKD 267
           LL+G                                    FCK+ R+ +A+ L +  E  
Sbjct: 352 LLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGR 411

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
             +P   +++ +I  L +  R DEA+  +  +  +  +PD VL+  M+ G  +  ++ DA
Sbjct: 412 SLLPDAVTFTTVIQKLCKESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDA 470

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
            KL   M + G  P    Y AL+ GFC  G    A  +  E+ +    P  H
Sbjct: 471 KKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERH 522



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 42/293 (14%)

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
            H++ +   ++  Y  A  +  A+       ++   PD ++YN+L+NGF K G++  AL 
Sbjct: 99  THNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALA 158

Query: 518 LFKELQ-------------LKGL--------------------RPDSVTYGTLINGLQRV 544
           LF E++             L+GL                     P+ ++Y  +I+GL + 
Sbjct: 159 LFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKS 218

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            + + A  +F QM      P    Y +L+    ++R+   A+ L+ +           + 
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTY 278

Query: 605 KSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFS 659
            ++ + L K G +ENA+    +M   + +  L P    Y+  + GL    + ++A  ++ 
Sbjct: 279 NTMIDGLCKCGRIENALTLYDDM---VREPHLKPDMFTYSALINGLNLSNRGEKAYELYE 335

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            +++        +   L+ GLCK G  D AM++F   +  G +  P V  Y +
Sbjct: 336 EMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIF-RKMGVGNVCDPNVITYTV 387


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 264/591 (44%), Gaps = 61/591 (10%)

Query: 4   TLNE----VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKR 59
           TL+E    +L I       E ALE L   +    V  V+       V  +FF WA KR+ 
Sbjct: 31  TLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEINVKIQFFKWAGKRRN 90

Query: 60  L-RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF---VLISGYYKVGDCE 115
                 +   +I  L     F   W+ + E+      V+        V I G  K+    
Sbjct: 91  FEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKM--VN 148

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLL 174
           KAL  F ++K   C+P    YN+++ +  ++        +Y+EM  + +C P+ +T+S+L
Sbjct: 149 KALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVL 208

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNK------------------------------- 203
           ++   K G+ + AI++ DEM   G+ P                                 
Sbjct: 209 VSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDKGCA 268

Query: 204 ---FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
              FTYT +I GL +  R ++AY +FL M   GC PD V  N L+N F K  R+++AL L
Sbjct: 269 PTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKL 328

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKR-YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
                     P + +Y+ +I  LF +K    EA +W+ KM    + P    Y ++I G  
Sbjct: 329 FDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFC 388

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  +V+ A+ LL +M E+G  P    Y +LI         + A  L +E+ +     +  
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSAR 448

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            + ++I  + + G   +A  LFN+M+K GC P V  +NAL+ GL +AG +E+A      M
Sbjct: 449 IYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTM 508

Query: 440 EI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           E  G  P L               S   ++      G   +A ++ M++ +S   PD ++
Sbjct: 509 EENGCTPDL--------------NSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVS 554

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
           YN+++    + G    A KL +E+  +G   D +TY +++  + +VD +++
Sbjct: 555 YNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 234/566 (41%), Gaps = 37/566 (6%)

Query: 99  DVFFVLISGYYKVG-DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           D  F+ I   +K G D EKALE      +     +V   +  +N+    Q F  A     
Sbjct: 33  DERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEINVKI--QFFKWAGK--- 87

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG---ILPNKFTYTIVISGLC 214
              + N   ++ T+  LI  L   G      KM+ EM +     I P   +  + I G  
Sbjct: 88  ---RRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKA 144

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKDGFVPR 272
           ++   ++A  +F ++K   C P    YN+++    +    ++   L      E D F P 
Sbjct: 145 KM--VNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCF-PD 201

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +YS L+    +  R D A   + +M    + P   +Y  ++    ++G  K A+ L+ 
Sbjct: 202 TMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEK-ALGLVQ 260

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+++G  P  + Y  LIKG    G ++ A S+ + + K    P+      LI    + G
Sbjct: 261 EMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAG 320

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGL--CKAGELEKANLLFYKMEI-GKNPTLFL 449
            ++DA KLF++M    C P+V  +N +I  L   KA   E A+  F KM+  G  P+ F 
Sbjct: 321 RLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASW-FEKMKANGVTPSSF- 378

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +   +++ +C    + KA  +L ++ E G  P    Y SLIN   K 
Sbjct: 379 -------------TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 425

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
                A +LF EL+    R  +  Y  +I  L +  R  +A  +F +M + GC P    Y
Sbjct: 426 KRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAY 485

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDF 628
            +LM+   R      AFS       +    D  S   I   L + G  E A +  ++M  
Sbjct: 486 NALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKD 545

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEA 654
            L       Y   L  L + G  +EA
Sbjct: 546 SLIKPDAVSYNTILGSLSRSGMFEEA 571



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 55/291 (18%)

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT----YNSLINGFCKVGN 511
           N  HD  +   ++      GL  + +K++ ++  S   P  +      + ++    K   
Sbjct: 90  NFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRS---PTCVIGPADLSEVVKILGKAKM 146

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYK 570
           +N AL +F +++ +  +P + TY ++I  L +    E    ++ +M   G C P    Y 
Sbjct: 147 VNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYS 206

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA--IQGLLEMDF 628
            L++   +                   GRDD +++  +E    G    A     LL + F
Sbjct: 207 VLVSAFVKL------------------GRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYF 248

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKE-ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           K  D +        +GL Q+ + K  A  +F+               +LI GL K G ++
Sbjct: 249 KSGDEKA-------LGLVQEMKDKGCAPTVFTY-------------TELIKGLGKSGRVE 288

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSL--LFSKDNKKVHAYHLLCRMKSV 736
            A  VFL  LK+G   +P V   L+ +L  +F K  +   A  L  +M+S+
Sbjct: 289 DAYSVFLNMLKDG--CKPDVV--LINNLINIFGKAGRLEDALKLFDQMRSL 335


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 250/529 (47%), Gaps = 53/529 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PDV   N VL +      +    AVY EM++L   P IVT++ L++   K G+ + A  +
Sbjct: 200 PDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASML 259

Query: 191 LDEMTQR--GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           L EM  +  G   N  T+ +VIS L +    + A +L   M+ S  +  F  YN L+   
Sbjct: 260 LKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFT-YNPLITAL 318

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            +   V +A AL    E +G +P + +Y+ +I GL + ++ + A   + +M    + PDV
Sbjct: 319 LERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDV 378

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + Y  ++    +AG +K+A+ LL D+R  G+ P    YN LI G+C LG L +AR L+ E
Sbjct: 379 ITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEE 438

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG----CF-------------- 410
           + ++   P+  T+TIL+ G  +   +  A++ F++M   G    CF              
Sbjct: 439 MVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSS 498

Query: 411 -----------------PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
                            P    +N +IDGLCK G L+ A  L  KM   G  P       
Sbjct: 499 TPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQP------- 551

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +   ++  +C  GL+ +A K+L  +   G  P ++TY  L++  C+ GN+
Sbjct: 552 -------DCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNL 604

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A   F+++   G+ P+ +TY  LI+ L    R   AFR F +M + G  P+   Y  L
Sbjct: 605 YSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLL 664

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           +  +CR   ++ A  L+ +  ++    D  +  ++ +   +G + +AI+
Sbjct: 665 IDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGHMYHAIE 713



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 211/455 (46%), Gaps = 16/455 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E + G  S+    F V+IS   + G  E A++    M+    +   + YN ++     + 
Sbjct: 264 ETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLITALLERG 322

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A A+  EM     +P +VT++ +I+GL K  + E A     EM   G+LP+  TY 
Sbjct: 323 FVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYN 382

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +++  C+     EA  L   ++ +G +P  + YN L++G+C+L  + EA  L     + 
Sbjct: 383 SLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQ 442

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P + +Y+ L++G  + +    A  ++ +M  + ++PD   Y   I           A
Sbjct: 443 GCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMA 502

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +L   M  +GI PDT  YN +I G C  G L  A+ L+ ++      P+  T+T LI  
Sbjct: 503 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHA 562

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
            C  G++ +A+KL N M   G  PSV  +  L+   C+ G L  A   F KM ++G  P 
Sbjct: 563 HCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEP- 621

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        ++ +   ++   C  G    A++   ++ E G  P+  TY  LI+G 
Sbjct: 622 -------------NEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGN 668

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           C+ GN   A++L+ E+   G+ PD  T+  L  G 
Sbjct: 669 CREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 141/302 (46%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L +LR   ++     +  LI GY ++GD  +A     +M E  C PDV  Y  ++N + +
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +   +A   + EM+     P+   ++  I        T +A ++ + M  +GI P+  T
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y ++I GLC+     +A RL  KM   G  PD + Y  L++  C+   + EA  LL    
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
            DG  P + +Y+ L+    R      AY W+RKM +  IEP+ + Y V+I  L   G+  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A +   +M ERG+ P+ Y Y  LI G C  G    A  L  E+ +    P+  T   L 
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700

Query: 386 CG 387
            G
Sbjct: 701 KG 702



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 217/517 (41%), Gaps = 21/517 (4%)

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD    N +L       R D+  A+     +    P + +Y+ L+D   +  R DEA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 293 YAWYRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
               ++M  +      + V + V+I  L+  G +++A+KL+  MR       ++ YN LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA-SSFTYNPLI 315

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
               + G + +A +LQ+E+     +P   T+  +I G+ +    + AQ  F +M   G  
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P V  +N+L++  CKAG L++A  L   +   G  PT+               +  T+++
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVL--------------TYNTLID 421

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            YC  G + +A ++  ++ E G  PD+ TY  L+NG  KV N+  A + F E+  KGL+P
Sbjct: 422 GYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQP 481

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D   Y T I     +     AF++   M   G  P    Y  ++   C+      A  L 
Sbjct: 482 DCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLK 541

Query: 590 LQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            + + D    D  +    I    ++G +  A + L  M        +  YTI +   C+ 
Sbjct: 542 TKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRR 601

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
           G +  A   F  +++        +   LIH LC  G   LA   F   L+ G  L P   
Sbjct: 602 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG--LAPNKY 659

Query: 709 NYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            Y L      ++     A  L   M   G   D C +
Sbjct: 660 TYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 696



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 213/494 (43%), Gaps = 60/494 (12%)

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           LA  R     G  P +   + ++  L  A R+D+  A Y +M + ++EP +V Y  ++  
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 318 LSEAGKVKDAMKLLSDMRER--GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
             + G+  +A  LL +M  +  G   +   +N +I      G L+ A  L V+  +    
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKL-VDSMRLSKK 305

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            ++ T+  LI  +   G V  A+ L  +ME  G  P+V  +NA+I GL K  + E A + 
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVK 365

Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F +M  +G  P              D  +  +++ +YC AG + +A  +L  L  +G  P
Sbjct: 366 FAEMRAMGLLP--------------DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAP 411

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            ++TYN+LI+G+C++G++  A +L +E+  +G  PD  TY  L+NG ++V     A   F
Sbjct: 412 TVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFF 471

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            +M   G  P    Y + +          +AF L                   E  + KG
Sbjct: 472 DEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLR------------------EVMMLKG 513

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
              + +                 Y + + GLC+ G +K+A  + + +V   +    P C+
Sbjct: 514 IYPDTVT----------------YNVIIDGLCKTGNLKDAKRLKTKMV---SDGLQPDCI 554

Query: 675 K---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
               LIH  C+RG L  A  +    + +G  L+P V  Y +      +      AY    
Sbjct: 555 TYTCLIHAHCERGLLREARKLLNGMVSDG--LQPSVVTYTILVHTCCRRGNLYSAYGWFR 612

Query: 732 RMKSVGYDLDACLY 745
           +M  VG + +   Y
Sbjct: 613 KMLDVGIEPNEITY 626



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 6/205 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + V+I G  K G+ + A     KM     QPD   Y  +++    + L   A  +   M
Sbjct: 520 TYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGM 579

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V     P++VT+++L++   + G    A     +M   GI PN+ TY ++I  LC   R 
Sbjct: 580 VSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRT 639

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A+R F +M + G +P+   Y  L++G C+     +A+ L     ++G  P   +++ L
Sbjct: 640 PLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 699

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKI 304
             G      +DE + ++   + E I
Sbjct: 700 FKG------FDEGHMYHAIEYMENI 718


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 226/471 (47%), Gaps = 26/471 (5%)

Query: 116 KALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           K L+SF KMK +               QPD+   N ++N            +V  +++K 
Sbjct: 64  KILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKR 123

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+ VT + LI GL   G+ + A+   D++  +G   N+ +Y  +I+G+C+I     A
Sbjct: 124 GYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAA 183

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +L  K+      P+ V Y+ +++  CK + V EA  L       G    + +YS LI G
Sbjct: 184 IKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 243

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                +  EA     +M  + I P+V  Y +++  L + GKVK+A  +L+ M +  + PD
Sbjct: 244 FCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPD 303

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y+ L+ G+  +  + +A+ +   +      P+ HT+TILI G C+N MVD+A  LF 
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFK 363

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M +    P +  +++LIDGLCK+G +     L  +M     P   +  S          
Sbjct: 364 EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYS---------- 413

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
              ++++  C  G + +A  +  ++ + G  P+  T+  L++G CK G +  A ++F++L
Sbjct: 414 ---SLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
             KG   +  TY  +I+G  +    E+A  +  +M  NGC P    ++ ++
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 219/445 (49%), Gaps = 15/445 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +G          K+ +    PD    N ++     K     AL  + +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               N V++  LING+ K G T  AIK+L ++  R   PN   Y+ +I  LC+     EA
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           Y LF +M   G S D V Y+ L+ GFC   ++ EA+ LL         P + +Y+ L+D 
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +  EA +    M +  ++PDV+ Y  ++ G     +VK A  + + M   G+ PD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            + Y  LI GFC   ++D+A +L  E+ +++ +P   T++ LI G+C++G +     L +
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           +M   G   +V  +++LIDGLCK G L++A  LF KM + G  P  F             
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTF------------- 445

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++  C  G +  A ++   L   G   ++ TYN +I+G CK G +  AL +  +
Sbjct: 446 -TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSK 504

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDR 546
           ++  G  PD+VT+  +I  L + D 
Sbjct: 505 MEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 212/402 (52%), Gaps = 10/402 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
           Q+ F F + A   KR   +  ++  ++ L+K  G  L  Q        D+L +    +  
Sbjct: 109 QITFGFSVLAKILKR--GYPPDTVTLNTLIK--GLCLKGQVKKALHFHDKLLAQGFQLNQ 164

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K+GD   A++   K+     +P+V +Y+ +++   + QL   A  ++ E
Sbjct: 165 VSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       ++VT+S LI G    GK + AI +L+EM  + I PN +TY I++  LC+  +
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +   M  +   PD + Y+ L++G+  +  V +A  +  +    G  P + +Y+ 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  + K  DEA   +++M ++ + P +V Y  +I GL ++G++     L+ +M +RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              +   Y++LI G C  G LD+A +L  ++  +   PNT TFTIL+ G+C+ G + DAQ
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 464

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           ++F  +   G   +V  +N +IDG CK G LE+A  +  KME
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 236/536 (44%), Gaps = 52/536 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+   + M      P    +  ++    ++     A  L  +++  G  PD +  N L+N
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC + ++    ++L    K G+ P   + + LI GL    +  +A  ++ K+  +  + 
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V YG +I G+ + G  + A+KLL  +  R   P+   Y+ +I   C   L+ +A  L 
Sbjct: 163 NQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLF 222

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +    +  T++ LI G C  G + +A  L N+M      P+V  +N L+D LCK 
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++++A ++L   ++    P              D  +  T+++ Y     + KA  +  
Sbjct: 283 GKVKEAKSVLAVMLKACVKP--------------DVITYSTLMDGYFLVYEVKKAQHVFN 328

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            ++  G  PD+ TY  LINGFCK   ++ AL LFKE+  K + P  VTY +LI+GL +  
Sbjct: 329 AMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R    + +  +M   G   +   Y SL+   C+      A +L+              MK
Sbjct: 389 RIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALF------------NKMK 436

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                          QG+    F         +TI L GLC+ G++K+A  +F  L+   
Sbjct: 437 D--------------QGIRPNTF--------TFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY-LLRSLLFSKD 720
             +   +   +I G CK+G L+ A+ +      NG I  P    + ++   LF KD
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCI--PDAVTFEIIIIALFKKD 528



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 175/352 (49%), Gaps = 5/352 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I  L K       +    E+    +S     +  LI G+   G  ++A+    +M  
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+VY YN +++   ++     A +V   M+K    P+++T+S L++G     + + 
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + + M+  G+ P+  TYTI+I+G C+    DEA  LF +M      P  V Y++L++
Sbjct: 323 AQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R+     L+      G    + +YS LIDGL +    D A A + KM ++ I P
Sbjct: 383 GLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   + +++ GL + G++KDA ++  D+  +G   + Y YN +I G C  GLL++A ++ 
Sbjct: 443 NTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTML 502

Query: 367 VEIWKRDSLPNTHTFTILICGMCR----NGMVDDAQKLFNKME-KAGCFPSV 413
            ++     +P+  TF I+I  + +     G V   +K++  +E K G  PS+
Sbjct: 503 SKMEDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSI 554



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 2/256 (0%)

Query: 186  VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
             A+ +   +  +GI P+ FT  I+I+  C + +    + +  K+   G  PD + +  L+
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 246  NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
            NG C   +V++AL         GF     SY  LI+G+ +      A    RK+     +
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 306  PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            PDVV+Y  +I  L +   V  A  L  +M  +GI  D   YN LI GFC +G L +A  L
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 366  QVEIWKRDSLPNTHTFTILICGMCRNG--MVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
              ++  +   PN  T+ IL+  +C+ G  ++D++  + +KME  GC  +   F  +I  L
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 424  CKAGELEKANLLFYKM 439
             +  E +K   L ++M
Sbjct: 1184 FEKDENDKVEKLLHEM 1199



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/407 (24%), Positives = 172/407 (42%), Gaps = 47/407 (11%)

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           +  D+A + + +M   +  P ++ +  ++   ++      A+ L   +  +GI PD    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N LI  FC +G +    S+  +I KR   P+T T   LI G+C  G V  A    +K+  
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G   +   +  LI+G+CK G+   A  L  K++         RL++      +     T
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID--------GRLTKP-----NVVMYST 204

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C   L+ +AY +  ++   G   D++TY++LI GFC  G +  A+ L  E+ LK 
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           + P+  TY  L++ L +  + ++A  +   M +    P    Y +LM             
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD------------ 312

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
             +L Y                      EV+ A      M        +  YTI + G C
Sbjct: 313 GYFLVY----------------------EVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           ++  V EALN+F  + +   +    +   LI GLCK G +    D+ 
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLI 397



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 166  PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
            P++ T ++LIN     G+      +L ++ +RG  P+  T+T +I+GLC   + ++A   
Sbjct: 959  PDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHF 1018

Query: 226  FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              K+   G   + V+Y  L+NG CK+     A+ LLR  +     P +  Y+ +ID L +
Sbjct: 1019 HDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCK 1078

Query: 286  AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +   +AY  + +M  + I  DVV Y  +I G    GK+K+A+ LL+ M  + I P+   
Sbjct: 1079 HQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRT 1138

Query: 346  YNALIKGFCDLG--LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
            YN L+   C  G  LLD++ S+  ++       N  TF I+I  +      D  +KL ++
Sbjct: 1139 YNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHE 1198

Query: 404  MEKAG 408
            M   G
Sbjct: 1199 MIARG 1203



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 2/245 (0%)

Query: 130  QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            QPD++  N ++N            ++  +++K    P+ +TF+ LINGL   G+   A+ 
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALH 1017

Query: 190  MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
              D++  +G   N+ +Y  +I+G+C+I     A +L  K+      PD V YN +++  C
Sbjct: 1018 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALC 1077

Query: 250  KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
            K + V +A  L       G    + +Y+ LI G     +  EA     KM  + I P+V 
Sbjct: 1078 KHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVR 1137

Query: 310  LYGVMIRGLSEAGK--VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
             Y +++  L + GK  + +++ +LS M + G   +   +  +I    +    D+   L  
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 368  EIWKR 372
            E+  R
Sbjct: 1198 EMIAR 1202



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 50/290 (17%)

Query: 287  KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            K Y  A +   ++  + I+PD+    ++I      G++     +L+ + +RG  PDT  +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 347  NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
              LI G C  G +++A     ++  +    N  ++  LI G+C+ G    A KL  K++ 
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 407  AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                P V M+N +ID LCK   + KA  LF++M +                         
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNV------------------------- 1094

Query: 467  MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
                                    G   D++TYN+LI GFC VG +  A+ L  ++ LK 
Sbjct: 1095 -----------------------KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131

Query: 527  LRPDSVTYGTLINGLQRVDRE--EDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            + P+  TY  L++ L +  ++  +++  +  +M  NGC  +   ++ +++
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 5/212 (2%)

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            D  +L  ++  +C  G I   + IL ++ + G  PD IT+ +LING C  G +N AL   
Sbjct: 960  DLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFH 1019

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             +L  +G + + V+YGTLING+ ++     A ++  ++      P   +Y +++   C+ 
Sbjct: 1020 DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKH 1079

Query: 580  RKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            +  S A+ L+ +  ++ IS         I  F   G+++ AI  L +M  K  +  +  Y
Sbjct: 1080 QLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTY 1139

Query: 639  TIWLIGLCQDGQ--VKEALNIFSVLVE--CKA 666
             I +  LC++G+  + E+L++ S + +  CKA
Sbjct: 1140 NILVDALCKEGKDLLDESLSMLSKMEDNGCKA 1171



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 12/234 (5%)

Query: 45   QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
            Q+ F F I A   KR   +  ++   + L+  NG  L  Q        D+L +    +  
Sbjct: 976  QITFNFSILAKILKR--GYHPDTITFTTLI--NGLCLKGQVNKALHFHDKLLAQGFQLNQ 1031

Query: 99   DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
              +  LI+G  K+GD   A++   K+     +PDV +YN +++   + QL   A  +++E
Sbjct: 1032 VSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFE 1091

Query: 159  MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
            M       ++VT++ LI G    GK + AI +L++M  + I PN  TY I++  LC+  +
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151

Query: 219  A--DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
               DE+  +  KM+D+GC  + V +  +++   +    D+   LL      G +
Sbjct: 1152 DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 11/252 (4%)

Query: 480  AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
            A  +  +L   G  PD+ T N LIN FC +G I     +  ++  +G  PD++T+ TLIN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 540  GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
            GL    +   A     ++   G   +   Y +L+   C+      A  L    LR I GR
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL----LRKIDGR 1060

Query: 600  ----DDESMKSIEEFLQKGEVENAIQGL-LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                D     +I + L K ++ +   GL  EM+ K     +  Y   + G C  G++KEA
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 655  LNIFSVLVECKAIVTPPSCVKLIHGLCKRG--YLDLAMDVFLYTLKNGFILRPRVCNYLL 712
            + + + +V         +   L+  LCK G   LD ++ +      NG          ++
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180

Query: 713  RSLLFSKDNKKV 724
             +L    +N KV
Sbjct: 1181 SALFEKDENDKV 1192



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 35/206 (16%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K K        F    ++  +    + S++I  L K       W  +DE+          
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI 410

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI G  K G  ++A+  F KMK+   +P+ +                         
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTF------------------------- 445

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                     TF++L++GL K G+ + A ++  ++  +G   N +TY ++I G C+    
Sbjct: 446 ----------TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLL 495

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALL 245
           +EA  +  KM+D+GC PD V +  ++
Sbjct: 496 EEALTMLSKMEDNGCIPDAVTFEIII 521


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 172/695 (24%), Positives = 304/695 (43%), Gaps = 74/695 (10%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FD+  +   E+   + SV+  V  +L+  Y +VG  ++A+++  + K     P +   N 
Sbjct: 138 FDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNF 197

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N         +A+A+Y  + +L   PN  T+ + I  L + G  E A+ +  EM + G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           + PN  T +  I GLC   R+D  Y     ++ +    D  AY A++ GFC   ++ EA 
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAE 317

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP------------ 306
            +      +G  P    Y  LI    +A    +A A +  M    I+             
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCL 377

Query: 307 -----------------------DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                                  D VLY +++  L + GKV++A++LL++M+ R +  D 
Sbjct: 378 CEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDV 437

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  LI G+C  G L  A+++  E+ +R   P+  T+ IL+ G  RNG+  +A +L + 
Sbjct: 438 VHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 497

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-------------------IGKN 444
           +   G  P+    N +I+GLC AG++++A      +E                     K 
Sbjct: 498 IGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKA 557

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             LF RLS+ G  V  K+  + ++   C  G   KA  +L ++      P+ I Y  LI 
Sbjct: 558 YELFSRLSKQGILVKKKSCFK-LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIG 616

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            FC+ G++  A  +F  L  +G+ PD +TY  +ING  RV+   +A  IF  M + G  P
Sbjct: 617 AFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 676

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLL 624
               Y  ++       K +L  +  LQ+ +   G ++E M +   + +          + 
Sbjct: 677 DVITYTVVLDG---HSKVNLKMARSLQFSK---GSEEEKMDASPFWSE----------MK 720

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           EM  K +   +  YT+ +   C+   +++A+N++  ++         +   L+   C RG
Sbjct: 721 EMGIKPD---VVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRG 777

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            +D A+ +       G     R  + L R +L ++
Sbjct: 778 DMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKAR 812



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 237/539 (43%), Gaps = 36/539 (6%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S  I  L      DL ++ L  LR+ N  + +  +  +I G+      ++A + F  M  
Sbjct: 266 STYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVN 325

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD YIY A+++   +    L A+A++ +MV      N V  S ++  L + G    
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASE 385

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            +    E    GI  ++  Y IV+  LC++ + +EA  L  +MK    S D V Y  L+ 
Sbjct: 386 VVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIA 445

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C   ++ +A  +    ++ G  P + +Y+ L+ G  R     EA      +  + ++P
Sbjct: 446 GYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKP 505

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   +  +I GL  AGKVK+A   L+ + ++ +      Y+A++ G+C      +A  L 
Sbjct: 506 NSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELF 561

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + K+  L    +   L+  +C  G  D A  L  +M      P+  M+  LI   C+ 
Sbjct: 562 SRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRD 621

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++++A L+F  + E G  P              D  +   M+  YC    + +A  I  
Sbjct: 622 GDMKRAQLVFDMLVERGITP--------------DVITYTMMINGYCRVNCLREARDIFN 667

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKL----------------FKELQLKGLRP 529
            + E G  PD+ITY  +++G  KV N+  A  L                + E++  G++P
Sbjct: 668 DMKERGIKPDVITYTVVLDGHSKV-NLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKP 726

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           D V Y  LI+   + +  +DA  ++ +M   G  P    Y +L++  C R     A +L
Sbjct: 727 DVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITL 785



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 154/680 (22%), Positives = 258/680 (37%), Gaps = 174/680 (25%)

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-----GF-- 269
           N  + A+  F ++K+SG   +   Y AL+   C+ R   +  +LL           GF  
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDI 134

Query: 270 --------------------------------VPRLGSYSCLIDGLFRAKR--------- 288
                                             R+G +   ID LF+ KR         
Sbjct: 135 TALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMS 194

Query: 289 -------------YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
                         D A A YR +    + P+   YG+ I+ L   G  ++A+ +  +M 
Sbjct: 195 CNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREME 254

Query: 336 ERGIVP-----------------------------------DTYCYNALIKGFCDLGLLD 360
           E G+ P                                   DT+ Y A+I+GFC    L 
Sbjct: 255 EAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLK 314

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG------------ 408
           +A  + +++      P+ + +  LI   C+ G +  A  L N M   G            
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSIL 374

Query: 409 -CFPSVGM----------------------FNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            C   +GM                      +N ++D LCK G++E+A  L  +M+ G+  
Sbjct: 375 QCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMK-GRRM 433

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           +L            D     T++  YC  G +  A  +  ++ E G  PDI+TYN L+ G
Sbjct: 434 SL------------DVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGG 481

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           F + G    AL+L   +  +GL+P+S T+  +I GL    + ++A   F    ++ C  +
Sbjct: 482 FSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEA-EAFLNTLEDKCLEN 540

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQKGEVENA---IQ 621
              Y +++   C+      A+ L+ +  +  I  +     K +     +GE + A   ++
Sbjct: 541 ---YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597

Query: 622 GLLEMDFKLNDFQLAPYTIWLIG-LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
            +L +D + N          LIG  C+DG +K A  +F +LVE        +   +I+G 
Sbjct: 598 RMLALDVEPNQIMYGK----LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGY 653

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNY-------------LLRSLLFSK--DNKKVH 725
           C+   L  A D+F    + G  ++P V  Y             + RSL FSK  + +K+ 
Sbjct: 654 CRVNCLREARDIFNDMKERG--IKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMD 711

Query: 726 AYHLLCRMKSVGYDLDACLY 745
           A      MK +G   D   Y
Sbjct: 712 ASPFWSEMKEMGIKPDVVCY 731



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 172/414 (41%), Gaps = 58/414 (14%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V+  L K    +   + L+E++   +S+    +  LI+GY   G    A   F +MKE  
Sbjct: 408 VVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERG 467

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL------PNIVTFSLLINGLSKSG 182
            +PD+  YN ++    R  L   AL +      L+C+      PN  T + +I GL  +G
Sbjct: 468 IEPDIVTYNILVGGFSRNGLKKEALEL------LDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 183 K-------------------------------TEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           K                               T  A ++   ++++GIL  K +   ++S
Sbjct: 522 KVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC     D+A  L  +M      P+ + Y  L+  FC+   +  A  +     + G  P
Sbjct: 582 SLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP 641

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG--------- 322
            + +Y+ +I+G  R     EA   +  M E  I+PDV+ Y V++ G S+           
Sbjct: 642 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQF 701

Query: 323 ------KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
                 +  DA    S+M+E GI PD  CY  LI   C    L  A +L  E+  R   P
Sbjct: 702 SKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQP 761

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +  T+T L+   C  G +D A  L N+M   G  P     + L  G+ KA +++
Sbjct: 762 DIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 261/566 (46%), Gaps = 38/566 (6%)

Query: 3   STLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIM---KTKNPQVGFRFFIWAAKRKR 59
           +T++E + +  T  P+  +L+ +LP L+   +  +I     + +P     FF W + +  
Sbjct: 40  TTISEAIKVSPT-KPLHSSLKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHH 98

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDEL---RSGNVSVVSD---------------VF 101
            R    +   ++  L  +      Q+L +    R G  S  S                VF
Sbjct: 99  FRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF 158

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            VL++ Y   G    A++ F  +++ + Q   +    + +   +  L   A A Y E++ 
Sbjct: 159 SVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILD 218

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P++  F++L++ L K  K   A  +  E+ +RG+ P   ++  +I+G C+    D+
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
            +RL   M ++   PD   Y+ L+NG CK  ++D+A  L       G VP   +++ LI+
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G     R D     Y++M  + ++PDV+ Y  +I GL + G +++A KL+ +M +RG+ P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D + Y  LI G C  G L+ A  ++ E+ K     +   FT LI G CR G V +A++  
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M +AG  P    +  +I G CK G+++    L  +M             Q    V   
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM-------------QCDGHVPGV 505

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++   C  G +  A  +L  +   G +PD ITYN L+ G CK GN     KL  E
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDRE 547
              KGL  D  +Y +LI  L++  +E
Sbjct: 566 ---KGLVQDYGSYTSLIGDLRKTCKE 588



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 204/459 (44%), Gaps = 26/459 (5%)

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVT--FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           +  F L++  Y  M    C   +++   SLL   +S+ GK   +      +  RG   + 
Sbjct: 96  QHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSN 155

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             ++++++         +A + F  ++       F +   L +   KL     A A    
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G+ P +  ++ L+  L +  + +EA   + ++ +  + P VV +  +I G  ++G 
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +    +L   M E  + PD + Y+ LI G C  G LD A  L +E+  R  +PN  TFT 
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIG 442
           LI G C  G  D   +++ +M + G  P V  +N LI+GLCK G+L +A  L  +M + G
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395

Query: 443 KNPTLFL----------------------RLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
             P  F                        + + G  + D  +   ++  +C  G + +A
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL-DNVAFTALISGFCREGQVIEA 454

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            + L ++ E+G  PD  TY  +I+GFCK G++    KL KE+Q  G  P  VTY  L+NG
Sbjct: 455 ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNG 514

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           L +  + ++A  +   M   G  P    Y  L+   C+ 
Sbjct: 515 LCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKH 553



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 189/411 (45%), Gaps = 16/411 (3%)

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           +S L++    +  + +A   +R + +  ++      G +   L +      A     ++ 
Sbjct: 158 FSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEIL 217

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + G  PD   +N L+   C    +++A+ L  EI KR   P   +F  LI G C++G +D
Sbjct: 218 DCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLD 277

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQG 454
              +L   M +   FP V  ++ LI+GLCK G+L+ AN LF +M + G  P         
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP--------- 328

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  +  T++  +C  G      +I  Q+   G  PD+ITYN+LING CKVG++  
Sbjct: 329 -----NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLRE 383

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A KL  E+  +GL+PD  TY  LI+G  +    E A  I  +M + G       + +L++
Sbjct: 384 AKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALIS 443

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLNDF 633
             CR  +   A     + L      DD +    I  F +KG+V+   + L EM    +  
Sbjct: 444 GFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
            +  Y + L GLC+ GQ+K A  +   ++    +    +   L+ G CK G
Sbjct: 504 GVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 190/389 (48%), Gaps = 28/389 (7%)

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           +++ V++   +++G   DA++    +R+  +    +    L      L L   A +   E
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEE 215

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I      P+   F +L+  +C+   +++AQ LF ++ K G  P+V  FN LI+G CK+G 
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275

Query: 429 LEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           L++   L  + ME    P +F              +   ++   C  G +  A K+ +++
Sbjct: 276 LDQGFRLKRFMMENRVFPDVF--------------TYSVLINGLCKEGQLDDANKLFLEM 321

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            + G +P+ +T+ +LING C  G  +  +++++++  KG++PD +TY TLINGL +V   
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS- 606
            +A ++  +M Q G  P    Y  L+   C+      A  +  + +++    D+ +  + 
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441

Query: 607 IEEFLQKGEV---ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           I  F ++G+V   E  ++ +LE   K +D   A YT+ + G C+ G VK     F +L E
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDD---ATYTMVIHGFCKKGDVKTG---FKLLKE 495

Query: 664 CKAIVTPPSCVK---LIHGLCKRGYLDLA 689
            +     P  V    L++GLCK+G +  A
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNA 524



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 36/286 (12%)

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D      ++ + C    I++A  +  ++ + G  P ++++N+LING+CK GN++   +L 
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + +    + PD  TY  LINGL +  + +DA ++F +M   G  P+   + +L+   C  
Sbjct: 284 RFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHC-- 341

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                           ++GR D  M+  ++ L+KG   + I                 Y 
Sbjct: 342 ----------------VTGRADLGMEIYQQMLRKGVKPDVIT----------------YN 369

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + GLC+ G ++EA  +   + +        +   LI G CK G L+ A+++    +K 
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           G  L       L+    F ++ + + A   L  M   G   D   Y
Sbjct: 430 GIELDNVAFTALISG--FCREGQVIEAERTLREMLEAGIKPDDATY 473



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LISG+ + G   +A  +  +M E   +PD   Y  V++   +K        +  EM
Sbjct: 437 AFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM 496

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                +P +VT+++L+NGL K G+ + A  +LD M   G++P+  TY I++ G C+    
Sbjct: 497 QCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNR 556

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGF---CKLRR 253
           ++  +L     + G   D+ +Y +L+      CK R+
Sbjct: 557 EDFDKL---QSEKGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 17/232 (7%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L   G     + ++ L+N +   G  + A++ F+ ++   L+    + G L + L +++ 
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
              A+  + ++   G  P    +  LM   C+  K + A  L+     +I  R       
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLF----GEIGKRGLRPTVV 261

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLA--------PYTIWLIGLCQDGQVKEALNIF 658
               L  G  ++   G L+  F+L  F +          Y++ + GLC++GQ+ +A  +F
Sbjct: 262 SFNTLINGYCKS---GNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLF 318

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             + +   +    +   LI+G C  G  DL M+++   L+ G  ++P V  Y
Sbjct: 319 LEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG--VKPDVITY 368


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 196/381 (51%), Gaps = 15/381 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN+V+++ +I+G S  G  E A ++LD M  +GI P+ +TY  +ISG+C+  R +EA  L
Sbjct: 206 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 265

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM + G  P+ V YN L++G+C    ++ A +      K G +P + +Y+ L+  LF 
Sbjct: 266 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             R  EA    ++M ++ I PD + Y ++I G S  G  K A  L ++M  +GI P    
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y +LI        + +A  L  +I  +   P+   F  +I G C NG V+ A  L  +M+
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
           +    P    FN L+ G C+ G++E+A +L  +M+  G  P              D  S 
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP--------------DHISY 491

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T++  Y   G I  A+ +  ++   G  P ++TYN+LI   CK    + A +L KE+  
Sbjct: 492 NTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 551

Query: 525 KGLRPDSVTYGTLINGLQRVD 545
           KG+ PD  TY +LI G+  VD
Sbjct: 552 KGISPDDSTYLSLIEGMGNVD 572



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 193/392 (49%), Gaps = 13/392 (3%)

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           GK + A + +  M   G  PN  +Y  +I G       + A R+   M+  G  PD   Y
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            +L++G CK  R++EA  L     + G VP   +Y+ LIDG       + A+++  +M +
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           + I P V  Y +++  L   G++ +A  ++ +MR++GI+PD   YN LI G+   G   +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A  L  E+  +   P   T+T LI  + R   + +A  LF K+   G  P V MFNA+ID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           G C  G +E+A +L  +M+    P              D+ +  T+++  C  G + +A 
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPP-------------DEVTFNTLMQGRCREGKVEEAR 473

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L ++   G  PD I+YN+LI+G+ + G+I  A  +  E+   G  P  +TY  LI  L
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCL 533

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            +    + A  +  +M   G +P  + Y SL+
Sbjct: 534 CKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 189/376 (50%), Gaps = 9/376 (2%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           +VVS  +  +I GY   G+ E A      M+    +PD Y Y ++++   ++     A  
Sbjct: 207 NVVS--YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++ +MV++  +PN VT++ LI+G    G  E A    DEM ++GI+P+  TY +++  L 
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 324

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
              R  EA  +  +M+  G  PD + YN L+NG+ +      A  L       G  P   
Sbjct: 325 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ LI  L R  R  EA   + K+ ++ + PDV+++  MI G    G V+ A  LL +M
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
             + + PD   +N L++G C  G +++AR L  E+  R   P+  ++  LI G  R G +
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL 451
            DA  + ++M   G  P++  +NALI  LCK  E + A  L  +M    I  + + +L L
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564

Query: 452 SQG-GNR---VHDKAS 463
            +G GN    V D AS
Sbjct: 565 IEGMGNVDTLVEDNAS 580



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 193/394 (48%), Gaps = 17/394 (4%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+  G  P+ V+YN +++G+     ++ A  +L +    G  P   +Y  LI G+ +  R
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +EA   + KM E  + P+ V Y  +I G    G ++ A     +M ++GI+P    YN 
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           L+      G + +A  +  E+ K+  +P+  T+ ILI G  R G    A  L N+M   G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P+   + +LI  L +   +++A+ LF K ++ G +P + +                 M
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM--------------FNAM 424

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ +C  G + +A+ +L ++      PD +T+N+L+ G C+ G +  A  L  E++ +G+
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +PD ++Y TLI+G  R    +DAF +  +M   G  P+   Y +L+   C+ ++  LA  
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQ 621
           L  + +      DD +  S+ E +  G V+  ++
Sbjct: 545 LLKEMVNKGISPDDSTYLSLIEGM--GNVDTLVE 576



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 170/350 (48%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LD +R   +   S  +  LISG  K G  E+A   F KM E    P+   YN +++  
Sbjct: 229 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 288

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             K     A +   EMVK   +P++ T++LL++ L   G+   A  M+ EM ++GI+P+ 
Sbjct: 289 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 348

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY I+I+G  +   A  A+ L  +M   G  P  V Y +L+    +  R+ EA  L   
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
               G  P +  ++ +IDG       + A+   ++M  + + PD V +  +++G    GK
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V++A  LL +M+ RGI PD   YN LI G+   G +  A  ++ E+      P   T+  
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           LI  +C+N   D A++L  +M   G  P    + +LI+G+     L + N
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 578



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 39/278 (14%)

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQ-TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           I  N  LF  L+   +R+  K+S+   ++E     G + KA + +  +   G  P++++Y
Sbjct: 157 IATNRELFDELTLSRDRLSVKSSIVFDLLE-----GKLKKAREFIGFMEGLGFKPNVVSY 211

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           N++I+G+   GNI GA ++   +++KG+ PDS TYG+LI+G+ +  R E+A  +F +M +
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-----------------ISGRDDE 602
            G  P+   Y +L+   C +     AFS   + ++                  + GR  E
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           +   I+E  +KG + +AI                 Y I + G  + G  K A ++ + ++
Sbjct: 332 ADDMIKEMRKKGIIPDAIT----------------YNILINGYSRCGNAKRAFDLHNEML 375

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
                 T  +   LI+ L +R  +  A D+F   L  G
Sbjct: 376 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 2/139 (1%)

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
           I  +  +G +E A + L  M  K  +     Y   + G+C++G+++EA  +F  +VE   
Sbjct: 215 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 274

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   LI G C +G L+ A       +K G +      N L+ +L    + +   A
Sbjct: 275 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM--EGRMGEA 332

Query: 727 YHLLCRMKSVGYDLDACLY 745
             ++  M+  G   DA  Y
Sbjct: 333 DDMIKEMRKKGIIPDAITY 351


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 230/440 (52%), Gaps = 20/440 (4%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-FASNSAVISMLLKPNGFDLYWQTL 86
           FL    V SVI +  +  +  +FF W++K++  R      + ++  L++        +T 
Sbjct: 8   FLEPRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRAR------RTR 61

Query: 87  DELRSGNVSVVSDV------FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           + +R     + +        F ++I  +  V +  +A    G M+     PDV  YN VL
Sbjct: 62  EAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVL 121

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
                      AL  + +M K  C PN+ T++ +INGL K GK + A+ +   +    + 
Sbjct: 122 KGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVD 180

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY+ ++ GLCQ  R + A +++  M ++    D  AYNA+ +GFCK RRVDEAL +
Sbjct: 181 PDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEV 240

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L++  + G  P + +Y+C+I+G+ + K R +EAY  +++M      P+ V YG MI GLS
Sbjct: 241 LKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLS 300

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  +V+  ++L   M + G+ PD Y Y++LI  F  +  LD+A+S+  +  +    P+ +
Sbjct: 301 KIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVY 360

Query: 380 TFTILICGMC--RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF- 436
            +T LI G C  R   VD+A  LF  M+    +P+V  +N ++ GLCK G  ++A  +F 
Sbjct: 361 MYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQ 420

Query: 437 --YKMEIGKNPTLFLRLSQG 454
             +K++   N   F  ++ G
Sbjct: 421 EMFKVKCSPNRMTFKVMTMG 440



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 208/412 (50%), Gaps = 23/412 (5%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++  ++ L++ L ++ +T  A++           P+ +++TI+I   C +     A+R  
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYSCLIDGLF 284
             M+  G  PD  AYN +L G+C L RV  AL     F K G    P + +Y+ +I+GL 
Sbjct: 103 GYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALI---KFGKMGKTCKPNVATYNTVINGLC 159

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  + D A   + ++  + ++PD   Y  ++ GL +A +++ A+K+   M E     D  
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR-NGMVDDAQKLFNK 403
            YNA+  GFC    +D+A  +   + +R   P+  T+  +I G+C+    +++A +LF +
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M  + C P+   +  +I GL K  E+++   LF  M + G +P              D  
Sbjct: 280 MVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSP--------------DGY 325

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV--GNINGALKLFK 520
           +  +++  +     + +A  IL   A +   PD+  Y +LI+G+C+     ++ AL LF+
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            ++ + + P+ +TY  ++ GL +  R ++A++IF +M +  C+P+   +K +
Sbjct: 386 NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 195/436 (44%), Gaps = 23/436 (5%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           DVY Y  +L+   R +    A+  +   +  +C P++ +F+++I           A + L
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             M   GI P+   Y +V+ G C + R   A   F KM  + C P+   YN ++NG CK 
Sbjct: 103 GYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKF 161

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            ++D A+ L      D   P   +YS L+ GL +A+R + A   Y  M E   + D   Y
Sbjct: 162 GKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAY 221

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL-GLLDQARSLQVEIW 370
             M  G  +  +V +A+++L  M +RG  P    YN +I G C     +++A  L  ++ 
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMV 281

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             D  PN  T+  +I G+ +   V    +LF  M KAG  P    +++LI    K  +L+
Sbjct: 282 GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLD 341

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVH---DKASLQTMVEQYCTA--GLIHKAYKILM 485
           +A  +                 Q   R H   D     T++  YC A    + +A  +  
Sbjct: 342 EAKSIL----------------QDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + +    P++ITYN ++ G CK G  + A ++F+E+      P+ +T+  +  G+    
Sbjct: 386 NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCG 445

Query: 546 REEDAFRIFGQMPQNG 561
           + +   RIF  M   G
Sbjct: 446 KTDKFERIFMDMVYKG 461



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 189/418 (45%), Gaps = 45/418 (10%)

Query: 32  TTVTSVIMKTKNPQVGFRFF---IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           T +   +++ +  +   RFF   + A  R  L SF   + +I            W+ L  
Sbjct: 48  TRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSF---TIIIQCFCNVRNPGRAWRYLGY 104

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +RS  +      + V++ GY  +G   +AL  FGKM +  C+P+V  YN V+N   +   
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGK 163

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD---------------- 192
              A+ ++  +      P+  T+S L++GL ++ + E AIK+ D                
Sbjct: 164 IDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNA 223

Query: 193 -------------------EMTQRGILPNKFTYTIVISGLCQI-NRADEAYRLFLKMKDS 232
                               M QRG  P+  TY  +I+G+CQ  NR +EAYRLF +M  S
Sbjct: 224 MADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGS 283

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            C P+ V Y  ++ G  K+  V   L L +   K G  P   +Y  LI    + ++ DEA
Sbjct: 284 DCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEA 343

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRERGIVPDTYCYNALI 350
            +  +      + PDV +Y  +I G   A K  V +A+ L  +M++R + P+   YN ++
Sbjct: 344 KSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVL 403

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +G C  G  D+A  +  E++K    PN  TF ++  GM   G  D  +++F  M   G
Sbjct: 404 RGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 199/425 (46%), Gaps = 26/425 (6%)

Query: 251 LRRVDEALALLRSF-----EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +RRV  +LAL R F     +++G+   +  Y+ L+  L RA+R  EA  ++++       
Sbjct: 18  IRRV-PSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCR 76

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +  + ++I+          A + L  MR  GI PD   YN ++KG+CDLG + +A  +
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA-LI 135

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           +     +   PN  T+  +I G+C+ G +D A  LF ++      P    ++ L+ GLC+
Sbjct: 136 KFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           A  LE A +  Y M +  N               D  +   M + +C    + +A ++L 
Sbjct: 196 AERLEAA-IKVYDMMLEANYD------------GDAGAYNAMADGFCKERRVDEALEVLK 242

Query: 486 QLAESGNLPDIITYNSLINGFCKVGN-INGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            + + G  P ++TYN +ING C+  N I  A +LF+++      P++VTYGT+I GL ++
Sbjct: 243 TMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKI 302

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              +    +F  M + G +P    Y SL+    + RK   A S+     R+  G D    
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMY 362

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSV 660
            ++     +       + LL     + D ++ P    Y I L GLC+ G+  EA  IF  
Sbjct: 363 TTLISGYCRARKPRVDEALLLFQ-NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQE 421

Query: 661 LVECK 665
           + + K
Sbjct: 422 MFKVK 426



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 146/349 (41%), Gaps = 65/349 (18%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLL 435
           + + +T L+  + R     +A + F +   A C PS+  F  +I   C      +A   L
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-- 493
            Y   +G  P              D  +   +++ YC  G + +A   L++  + G    
Sbjct: 103 GYMRSLGIPP--------------DVTAYNVVLKGYCDLGRVGRA---LIKFGKMGKTCK 145

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P++ TYN++ING CK G I+ A+ LF  L    + PD  TY TL++GL + +R E A ++
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           +  M +         Y ++    C+ R                  R DE+++ ++  +Q+
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKER------------------RVDEALEVLKTMIQR 247

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ-DGQVKEALNIFSVLVECKAIVTPPS 672
           G   + +                 Y   + G+CQ   +++EA  +F  +V       PP+
Sbjct: 248 GCKPSVVT----------------YNCIINGVCQYKNRIEEAYRLFQQMVGSDC---PPN 288

Query: 673 CV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFS 718
            V    +I GL K   +   +++F    K G  L P    Y   SL+++
Sbjct: 289 AVTYGTMILGLSKIYEVQRCLELFKGMSKAG--LSPD--GYAYHSLIYA 333


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 252/522 (48%), Gaps = 31/522 (5%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D + S  +      + +LI    K     K      KM++    P+ + YN ++N   +
Sbjct: 33  IDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMK 92

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           ++    A  V+ EM+ LN  PN VT+++LI+G    G  E A+++LD M  +G+ P++  
Sbjct: 93  ERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVN 152

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  ++SGL ++ + D A  L  +++ SG    + AY A+++G CK   +DE+L LL    
Sbjct: 153 YGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMF 212

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           KDG  P + ++S LI+G  +A +   A     KMF+  + P+ V+Y  +I    + G + 
Sbjct: 213 KDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDIT 272

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A +  + M   G   D +  N LI   C  G + +A      +   D  PN+ TF  +I
Sbjct: 273 EAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCII 332

Query: 386 CGMCRNGMVDDAQK---LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-- 440
            G    G++ DA K   +F++M K G  PS   + +L+ GLCK G L +A  L YK+   
Sbjct: 333 NGY---GILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHI 389

Query: 441 ---IGKN--PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-- 493
              +  N   T+     + G ++ D  +L   + Q+      H    IL  L+  G +  
Sbjct: 390 PAAVDTNIYNTILSETCKRG-KLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVP 448

Query: 494 ---------------PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
                          P+ + Y SL +G  KVG  N A  +++E++ KG+ PD++    ++
Sbjct: 449 ALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVL 508

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           +G  R+ + E   ++F +M     TPS A Y  L+    +++
Sbjct: 509 DGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 188/785 (23%), Positives = 337/785 (42%), Gaps = 99/785 (12%)

Query: 42  KNPQVGFRFFIWAAKRKRL---RSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVS 98
           KN +    + +    RKR+     F  N+ +I+ L+K        +  +E+   N+S   
Sbjct: 57  KNNRSAKGYLLLKKMRKRMIAPNEFTYNT-LINGLMKERKIGGATRVFNEMLMLNLSPNR 115

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLN----------------- 141
             + +LI G+   G+ E+AL     M+    +PD   Y A+L+                 
Sbjct: 116 VTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMER 175

Query: 142 -------IAFRKQLFLL-----------ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
                  + +R    ++           +L +   M K    P+I+TFS+LING  K+GK
Sbjct: 176 IRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGK 235

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A +++ +M + G+ PN   Y  +I   C+     EA+R +  M  +G   D+   N 
Sbjct: 236 IKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNV 295

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++  C+  RV EA   +R        P   ++ C+I+G        +A++ + +M +  
Sbjct: 296 LISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLG 355

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P    YG +++GL + G +++A KLL  +       DT  YN ++   C  G L  A 
Sbjct: 356 HCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAV 415

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF-PSVGMFNALIDG 422
           +L  E+ + + LP++HT+ I++ G+ R G +  A   F K    G   P+  M+ +L DG
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDG 475

Query: 423 LCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           L K G+   A+ ++ +ME  G NP              D  ++  +++ Y   G + K  
Sbjct: 476 LFKVGQSNAASYIYEEMEHKGINP--------------DTIAINAVLDGYSRMGKMEKVE 521

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           K+ +++      P + TYN L++G+ K  ++    K +  +   G+ PD +T  ++I GL
Sbjct: 522 KLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGL 581

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-----LQYLRDI 596
            +    +  F++  +M              L+T SC   K   AF L      L  + D+
Sbjct: 582 CKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDV 641

Query: 597 SGRDD------------ESMKSIEEFLQKGEVENAIQ-----------GLLEMDFKLND- 632
           +  +             ES   + + L++G    + Q           G ++  F+L D 
Sbjct: 642 NTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDE 701

Query: 633 FQLAPYTIWLI-------GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
            +    + W +       GL Q G+V+EA+ +   +++ + I T  +   L+H LCK+  
Sbjct: 702 MEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAK 761

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L  A+ +       G  L     N L+  L    D   + A++L   MK  G      L+
Sbjct: 762 LSEALKLRGKMALYGVKLDVVAYNVLISGL--CADGDALAAFNLYEEMKERG------LW 813

Query: 746 PKTKS 750
           P T +
Sbjct: 814 PNTTT 818



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 271/576 (47%), Gaps = 24/576 (4%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P IVT++ ++N   K G+ + A  ++D M  +GI  +  TY ++I  LC+ NR+ + Y 
Sbjct: 7   VPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYL 66

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  KM+    +P+   YN L+NG  K R++  A  +          P   +Y+ LIDG  
Sbjct: 67  LLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHC 126

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
               +++A      M  + + PD V YG ++ GLS+  K   A  L+  +R  G+V    
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYR 186

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            Y A+I G C  GLLD++  L   ++K  + P+  TF++LI G C+ G + +A+++  KM
Sbjct: 187 AYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKM 246

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASL 464
            KAG  P+  ++  LI   CK G++ +A   +  M            ++ G+ V D    
Sbjct: 247 FKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATM------------TRTGHDV-DYFIC 293

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++   C AG + +A   +  ++     P+ IT++ +ING+  +G+   A  +F E+  
Sbjct: 294 NVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIK 353

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G  P   TYG+L+ GL +     +A ++  ++          +Y ++++ +C+R K S 
Sbjct: 354 LGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSD 413

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAP----YT 639
           A +L+ + ++     D  +   I   L +KG++   +  LL  +  L    L+P    YT
Sbjct: 414 AVALFGEMVQFNVLPDSHTYAIILAGLSRKGKM---VPALLFFEKALARGTLSPNKVMYT 470

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVFLYTLK 698
               GL + GQ   A  I+  + E K I      +  ++ G  + G ++    +F+    
Sbjct: 471 SLFDGLFKVGQSNAASYIYEEM-EHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQS 529

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHA-YHLLCRM 733
                     N LL      KD  K    Y+++ RM
Sbjct: 530 GSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRM 565



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 218/472 (46%), Gaps = 26/472 (5%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M   G +P   TY  +++  C+  R   A  L  +M+  G   D   YN L++  CK  R
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             +   LL+   K    P   +Y+ LI+GL + ++   A   + +M    + P+ V Y +
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G  + A++LL  M  +G+ PD   Y AL+ G   L   D A+SL   I    
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            +     +T +I G+C++G++D++ +L + M K G  P +  F+ LI+G CKAG+++ A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +  KM + G  P   +                T++   C  G I +A++    +  +G+
Sbjct: 241 EVICKMFKAGLAPNYVI--------------YATLIYNSCKKGDITEAFRNYATMTRTGH 286

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             D    N LI+  C+ G +  A    + +    L P+S+T+  +ING   +     AF 
Sbjct: 287 DVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFS 346

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEF 610
           +F +M + G  PS   Y SL+   C+      A  L L  L  I    D ++ +  + E 
Sbjct: 347 MFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKL-LYKLHHIPAAVDTNIYNTILSET 405

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIF 658
            ++G++ +A+    EM      F + P    Y I L GL + G++  AL  F
Sbjct: 406 CKRGKLSDAVALFGEM----VQFNVLPDSHTYAIILAGLSRKGKMVPALLFF 453



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 263/583 (45%), Gaps = 24/583 (4%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P +  YN +LN   +K  +  A  +   M       ++ T+++LI+ L K+ ++     +
Sbjct: 8   PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           L +M +R I PN+FTY  +I+GL +  +   A R+F +M     SP+ V YN L++G C 
Sbjct: 68  LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
               ++AL LL   E  G  P   +Y  L+ GL +  ++D A +   ++    +      
Sbjct: 128 CGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRA 187

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  MI GL + G + ++++LL  M + G  PD   ++ LI GFC  G +  A+ +  +++
Sbjct: 188 YTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMF 247

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K    PN   +  LI   C+ G + +A + +  M + G      + N LI  LC+AG + 
Sbjct: 248 KAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVA 307

Query: 431 KANLLFYKM---EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY---------------- 471
           +A      M   ++  N   F  +  G   + D     +M ++                 
Sbjct: 308 EAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLL 367

Query: 472 ---CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C  G + +A K+L +L       D   YN++++  CK G ++ A+ LF E+    + 
Sbjct: 368 KGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVL 427

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC-TPSPAVYKSLMTWSCRRRKFSLAFS 587
           PDS TY  ++ GL R  +   A   F +    G  +P+  +Y SL     +  + + A  
Sbjct: 428 PDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASY 487

Query: 588 LWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
           ++ +        D  ++ ++ + + + G++E   +  ++M        LA Y I L G  
Sbjct: 488 IYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYS 547

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
           +   + +    ++++          +C  +I GLCK G LD+ 
Sbjct: 548 KKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVG 590



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 228/480 (47%), Gaps = 49/480 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G  K G+  +A +   K+       D  IYN +L+   ++     A+A++ EMV+ N
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEA 222
            LP+  T+++++ GLS+ GK   A+   ++   RG L PNK  YT +  GL ++ +++ A
Sbjct: 426 VLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAA 485

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             ++ +M+  G +PD +A NA+L+G+ ++ ++++   L    +     P L +Y+ L+ G
Sbjct: 486 SYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHG 545

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER----- 337
             + K   +   +Y  M    I PD +    +I GL ++G +    K+L  M        
Sbjct: 546 YSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVD 605

Query: 338 ------------------------------GIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
                                         GI+PD   YNA+  G      L ++  L  
Sbjct: 606 QLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLH 665

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ +R   P +  +  LI GMCR G +  A +L ++ME  G        +A++ GL + G
Sbjct: 666 DMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCG 725

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           ++E+A L+   M       L  RL      +   A+  T++   C    + +A K+  ++
Sbjct: 726 KVEEAMLVLDCM-------LQKRL------IPTVATFTTLMHMLCKKAKLSEALKLRGKM 772

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
           A  G   D++ YN LI+G C  G+   A  L++E++ +GL P++ TY TLI+ +   + E
Sbjct: 773 ALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGE 832



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 166/351 (47%), Gaps = 1/351 (0%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           +E+    ++  +     ++ GY ++G  EK  + F KM+     P +  YN +L+   +K
Sbjct: 490 EEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKK 549

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
           +  L     Y  M ++   P+ +T   +I GL KSG  +V  KML +M     L ++ T 
Sbjct: 550 KDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTL 609

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            ++I+  C+ ++  +A+ L       G  PD   YNA+  G  +   + E+  LL    +
Sbjct: 610 NMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLE 669

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G  P    Y  LI+G+ R      A+    +M    +    V    M+RGL++ GKV++
Sbjct: 670 RGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEE 729

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           AM +L  M ++ ++P    +  L+   C    L +A  L+ ++       +   + +LI 
Sbjct: 730 AMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLIS 789

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL-CKAGELEKANLLF 436
           G+C +G    A  L+ +M++ G +P+   +  LID +    GE+E+  L++
Sbjct: 790 GLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 1/135 (0%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V  S ++ GL++ GK E A+ +LD M Q+ ++P   T+T ++  LC+  +  EA +L  K
Sbjct: 712 VAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGK 771

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK- 287
           M   G   D VAYN L++G C       A  L    ++ G  P   +Y  LID +   + 
Sbjct: 772 MALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEG 831

Query: 288 RYDEAYAWYRKMFEE 302
             +E    Y + FE+
Sbjct: 832 EVEERLLVYLEQFEK 846


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 15/409 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+ +T +  I G    G+   A+   D++   G   ++ +Y  +I+GLC++     A  L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +       PD V YN +++G CK + V++A  L          P + +Y+ LI G   
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  +A   + KM  + I PDV  + +++ G  + G +K+A  +L+ M ++ I PD   
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y++L+ G+C +  +++A S+   +  R    N  ++ I+I G C+  MVD+A KLF +M 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
               FP V  +++LIDGLCK+G +  A  L  +M   G+ P              D  + 
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP--------------DIITY 546

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            ++++  C    + KA  +L +L   G  PD+ TY  L+ G C+ G +  A K+F++L +
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV 606

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           KG   D   Y  +I G       ++A  +  +M +NGC P    Y+ ++
Sbjct: 607 KGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 203/396 (51%), Gaps = 13/396 (3%)

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           ++ + G  P+  T T  I G C   +  +A     K+   G   D V+Y  L+NG CK+ 
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
               AL LLR  +     P +  Y+ +IDG+ + K  ++A+  Y +   ++I PDV  Y 
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I G    GK+KDA+ L + M  + I+PD Y ++ L+ GFC  G + +A+++   + K+
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+  T++ L+ G C    V+ A+ +FN M   G   +V  +N +I+G CK   +++A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
             LF +M    +  +F           D  +  ++++  C +G I  A +++ ++   G 
Sbjct: 493 MKLFKEMH---HKQIF----------PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ 539

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PDIITYNS+++  CK  +++ A+ L  +L+ +G+RPD  TY  L+ GL +  + EDA +
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +F  +   G       Y  ++   C +  F  A +L
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALAL 635



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 217/442 (49%), Gaps = 15/442 (3%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL  + +++ +    + V++  LINGL K G+T+ A+++L     + + P+   Y  +I 
Sbjct: 282 ALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIID 341

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G+C+    ++A+ L+ +       PD   YNAL++GFC + ++ +A+ L         +P
Sbjct: 342 GMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP 401

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + ++S L+DG  +     EA      M ++ I+PDVV Y  ++ G     +V  A  + 
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           + M  RG+  +   YN +I GFC + ++D+A  L  E+  +   P+  T++ LI G+C++
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +  A +L ++M   G  P +  +N+++D LCK   ++KA             TL  +L
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKA------------ITLLTKL 569

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
              G R  D  +   +V+  C +G +  A K+   L   G   D+  Y  +I GFC  G 
Sbjct: 570 KGQGIR-PDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGL 628

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + AL L  +++  G  PD+ TY  +I  L   D  + A ++  +M   G     A+   
Sbjct: 629 FDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL--VALTDD 686

Query: 572 LMTWSCRRRKFSLAFSLWLQYL 593
           L+     RR +    +LW+ ++
Sbjct: 687 LVASILVRRTWCARLALWVTFI 708



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 189/337 (56%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  KVG+ + ALE   +      QPDV +YN +++   + +    A  +Y E V   
Sbjct: 304 LINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR 363

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++ T++ LI+G    GK + AI + ++MT + I+P+ +T++I++ G C+     EA 
Sbjct: 364 IFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAK 423

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M      PD V Y++L++G+C +  V++A ++  +    G    + SY+ +I+G 
Sbjct: 424 NVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGF 483

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            + K  DEA   +++M  ++I PDV+ Y  +I GL ++G++  A++L+ +M  RG  PD 
Sbjct: 484 CKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDI 543

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN+++   C    +D+A +L  ++  +   P+ +T+TIL+ G+C++G ++DA+K+F  
Sbjct: 544 ITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED 603

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           +   G    V  +  +I G C  G  ++A  L  KME
Sbjct: 604 LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 258/589 (43%), Gaps = 66/589 (11%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A++++Y +++ N  P  + F  ++  L KS      + +  +M  +GI  N     I+I+
Sbjct: 94  AVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILIN 153

Query: 212 GLCQINRADEAYRLFLK-------MKDSGCSPDFVAYNAL--------------LNGFCK 250
             CQ+     A+ +  +       +KD     +   +  L              L  F +
Sbjct: 154 SFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQ 213

Query: 251 LRRVD----------------EALALLRSFE-----------KDGFVPRLGSYSCLIDGL 283
            R  +                +   LL+SFE           K+G+ P   + +  I G 
Sbjct: 214 SRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGF 273

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +  +A  ++ K+       D V YG +I GL + G+ K A++LL     + + PD 
Sbjct: 274 CLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDV 333

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN +I G C    ++ A  L  E   +   P+  T+  LI G C  G + DA  LFNK
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           M      P V  F+ L+DG CK G +++A N+L   M+    P              D  
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKP--------------DVV 439

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +  ++++ YC    ++KA  I   ++  G   ++ +YN +INGFCK+  ++ A+KLFKE+
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             K + PD +TY +LI+GL +  R   A  +  +M   G  P    Y S++   C++   
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559

Query: 583 SLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
             A +L L  L+    R D +  +I  +   Q G++E+A +   ++  K  +  +  YT+
Sbjct: 560 DKAITL-LTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            + G C  G   EAL + S + E   I    +   +I  L ++   D+A
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMA 667



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 179/334 (53%), Gaps = 8/334 (2%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVY 134
           + FDLY + + +       +  DVF    LISG+  VG  + A++ F KM   +  PDVY
Sbjct: 351 DAFDLYSEKVSK------RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
            ++ +++   +      A  V   M+K +  P++VT+S L++G     +   A  + + M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
           + RG+  N  +Y I+I+G C+I   DEA +LF +M      PD + Y++L++G CK  R+
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
             AL L+      G  P + +Y+ ++D L +    D+A     K+  + I PD+  Y ++
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           ++GL ++GK++DA K+  D+  +G   D Y Y  +I+GFCD GL D+A +L  ++ +   
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGC 644

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +P+  T+ I+I  +      D A+KL  +M   G
Sbjct: 645 IPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 120/237 (50%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V +  KA   F  M       +V  YN ++N   + ++   A+ ++ EM    
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P+++T+S LI+GL KSG+   A++++DEM  RG  P+  TY  ++  LC+ +  D+A 
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L  K+K  G  PD   Y  L+ G C+  ++++A  +       G+   + +Y+ +I G 
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                +DEA A   KM E    PD   Y ++I  L E  +   A KLL +M  RG++
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 179/416 (43%), Gaps = 24/416 (5%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D    +YR + +    PD+  +G ++  L ++      + L   M  +GI  +    N L
Sbjct: 93  DAVSLFYRLLRQNPTPPDIE-FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 350 IKGFCDLGLLDQARSL------QVEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQK 399
           I  FC LGL+  A S+       +EI K    R +L +      ++       ++ D ++
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVL------ILWDFKR 205

Query: 400 LFNK-MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           LF K   ++  F  +  F  LI+   K    +K  L  +++ I   P   L+        
Sbjct: 206 LFLKDFLQSRLFNVLHSFKILIE-YHKTFIKQKCLLKSFEISIEYTPPKILK----NGYE 260

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +L T ++ +C  G IH+A     ++   G   D ++Y +LING CKVG    AL+L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +    K ++PD V Y T+I+G+ +     DAF ++ +       P    Y +L++  C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
             K   A  L+ +        D  +    ++ F + G ++ A   L  M  +     +  
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           Y+  + G C   +V +A +IF+ +          S   +I+G CK   +D AM +F
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLF 496



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  K G    ALE   +M     QPD+  YN++L+   +K     A+ +  ++    
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++ T+++L+ GL +SGK E A K+ +++  +G   + + YT++I G C     DEA 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
            L  KM+++GC PD   Y  ++    +    D A  LLR     G +  L
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 66/134 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  L K +  D     L +L+   +    + + +L+ G  + G  E A + F  +  
Sbjct: 547 NSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV 606

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                DVY Y  ++     K LF  ALA+  +M +  C+P+  T+ ++I  L +  + ++
Sbjct: 607 KGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDM 666

Query: 187 AIKMLDEMTQRGIL 200
           A K+L EM  RG+L
Sbjct: 667 AEKLLREMIMRGLL 680


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 143/561 (25%), Positives = 269/561 (47%), Gaps = 15/561 (2%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVF 101
           ++  V   F I A+   R  +FA N AV + +   +  +         R G     +  +
Sbjct: 140 RHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSY 199

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            V+I+G ++ G    A+E F +M E    P+   YN +++   +        ++  +MV 
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC 259

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               PN +T+++L++GL ++G+      +LDEM  + ++P+ FTY+I+  GL +   +  
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
              LF K   +G +      + LLNG CK  +V  A  +L+S    G VP    Y+ LI+
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLIN 379

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G  +    + A++ + +M    I+PD + Y  +I GL +A ++ +A  LL +M++ G+ P
Sbjct: 380 GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNP 439

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               +N LI  +   G L++   +  E+ +    PN  ++  ++   C+NG + +A  + 
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD 460
           + M      P+  ++NA+ID   + G  ++A +L  KM+  G +P++             
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV------------ 547

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   +++  C    I +A +I+  L+    +PD ++YN+LI+  C  GNI+ AL L +
Sbjct: 548 --TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 605

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            +   G++    TY  LI+GL    R  +   ++ +M QN   PS A++  ++    +  
Sbjct: 606 RMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 665

Query: 581 KFSLAFSLWLQYLRDISGRDD 601
               A  L  + L+  +  DD
Sbjct: 666 NEIKAEDLRKEMLQKRNNHDD 686



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 237/534 (44%), Gaps = 19/534 (3%)

Query: 187 AIKMLDEMTQ--RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           A+++L ++    R  LP+  +  +++  L  + R  +  R F  +  +G  PD  A+N  
Sbjct: 107 ALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKA 166

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLG-SYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +        + EA+ +LR   +DG  P    SY+ +I G++RA R  +A   + +M E  
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + P+ + Y  MI G  + G ++    L   M   G+ P+   YN L+ G C  G + +  
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +L  E+  +  +P+  T++IL  G+ RNG       LF K  K G        + L++GL
Sbjct: 287 ALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGL 346

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK G++  A  +   +   G  PT  +                T++  YC  G +  A+ 
Sbjct: 347 CKDGKVSIAEEVLQSLVNAGLVPTRVI--------------YNTLINGYCQTGELEGAFS 392

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
              Q+      PD ITYN+LING CK   I  A  L  E+Q  G+ P   T+ TLI+   
Sbjct: 393 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 452

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ-YLRDISGRDD 601
           R  + E  F +  +M +NG  P+   Y S++   C+  K   A ++    + +D+     
Sbjct: 453 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 512

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
                I+ +++ G  + A   + +M        +  Y + + GLC   Q+ EA  I + L
Sbjct: 513 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
              + I    S   LI   C RG +D A+D+     K G     R  + L+  L
Sbjct: 573 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 248/544 (45%), Gaps = 59/544 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +++S Y + GD  +A ++F  M+    +P  ++Y ++++     +    AL+   +M 
Sbjct: 309 YGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMK 368

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+++ G +K G  + A +   E   R    N   Y  +I   CQ    D
Sbjct: 369 EEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMD 428

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M+  G       Y+ +++G+  +   ++ L +    ++ GF P + SY CLI
Sbjct: 429 QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLI 488

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    + M    I+ ++  Y ++I G  +     +A  +  D+ + G+ 
Sbjct: 489 NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLK 548

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I+ FC +G +D+A  +  E+ K    P + TF  +I G  R G +  A  +
Sbjct: 549 PDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDV 608

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M ++GC P+V  FNALI GL +  ++EKA  +  +M                     
Sbjct: 609 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAA 668

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA----------------- 480
             + GK    F +L   G ++ D  + + +++  C +G +  A                 
Sbjct: 669 LGDTGKAFEYFTKLRDEGLQL-DVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 727

Query: 481 -YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            Y IL+                 Q+ + G  PDI TY S IN  CK G++  A K+ +E+
Sbjct: 728 VYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEM 787

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +  G++P+  TY TLI+G  R    E A R F +M   G  P  AVY  LMT    R   
Sbjct: 788 ETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATV 847

Query: 583 SLAF 586
           + A+
Sbjct: 848 TEAY 851



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 199/454 (43%), Gaps = 48/454 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +    D++  ++ GY  VG+ EK L  F ++KE    P V  Y  ++N+  +  
Sbjct: 436 EMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVG 495

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M       N+ T+S+LING  K      A  + +++ + G+ P+   Y 
Sbjct: 496 KISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYN 555

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I   C +   D A  +  +M+     P    +  +++GF +   +  AL +     + 
Sbjct: 556 NIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRS 615

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +++ LI GL   ++ ++A     +M    + P+   Y  ++ G +  G    A
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKA 675

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + +R+ G+  D Y Y AL+K  C  G +  A ++  E+  ++   NT  + ILI G
Sbjct: 676 FEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDG 735

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             R G V +A  L  +M++ G  P +  + + I+  CKAG++ +A+ +  +ME       
Sbjct: 736 WARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMET------ 789

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                                     SG  P++ TY +LI+G+ 
Sbjct: 790 ------------------------------------------SGVKPNVKTYTTLIHGWA 807

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +      AL+ F+E++L GL+PD   Y  L+  L
Sbjct: 808 RASLPEKALRCFQEMKLAGLKPDKAVYHCLMTAL 841



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 161/344 (46%)

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           + S  +      + +LI+G+ K+ D   A   F  + +   +PDV +YN ++        
Sbjct: 507 MESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGT 566

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              A+ +  EM K    P   TF  +I+G +++G+ + A+ + D M + G +P   T+  
Sbjct: 567 MDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNA 626

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           +I GL +  + ++A  +  +M  +G SP+   Y  +++G+  L    +A         +G
Sbjct: 627 LILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEG 686

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
               + +Y  L+    ++ R   A A  ++M  + I  +  +Y ++I G +  G V +A 
Sbjct: 687 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAA 746

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L+  M++ G+ PD + Y + I   C  G + +A  +  E+      PN  T+T LI G 
Sbjct: 747 DLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGW 806

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
            R  + + A + F +M+ AG  P   +++ L+  L     + +A
Sbjct: 807 ARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEA 850



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/514 (20%), Positives = 218/514 (42%), Gaps = 57/514 (11%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P++  Y +++S   +      A + F  M+  G  P    Y +L++ +   R ++EAL+ 
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
            R  +++G    L +YS ++ G  +    D A  W+++  +     + ++YG MI    +
Sbjct: 364 ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQ 423

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
              +  A  L+ +M   GI      Y+ ++ G+  +G  ++ + L V             
Sbjct: 424 TCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVG--NEEKCLTV------------- 468

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
                               F ++++ G  PSV  +  LI+   K G++ KA      +E
Sbjct: 469 --------------------FERLKECGFAPSVVSYGCLINLYAKVGKISKA------LE 502

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           + K       + +     H+  +   ++  +        A+ I   + + G  PD++ YN
Sbjct: 503 VSK-------MMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYN 555

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           ++I  FC +G ++ A+ + KE+Q +  RP S T+  +I+G  R    + A  +F  M ++
Sbjct: 556 NIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRS 615

Query: 561 GCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENA 619
           GC P+   + +L+     +R+   A  +  +  L  +S  +      +  +   G+   A
Sbjct: 616 GCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKA 675

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---L 676
            +   ++  +     +  Y   L   C+ G+++ AL   +V  E  A   P +      L
Sbjct: 676 FEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL---AVTKEMSAQNIPRNTFVYNIL 732

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           I G  +RG +  A D+ +  +K G + +P +  Y
Sbjct: 733 IDGWARRGDVWEAADL-MQQMKQGGV-KPDIHTY 764



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 108/227 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I  L++    +   + LDE+    VS     +  ++ GY  +GD  KA E F K+++
Sbjct: 625 NALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRD 684

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              Q DVY Y A+L    +      ALAV  EM   N   N   +++LI+G ++ G    
Sbjct: 685 EGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWE 744

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  ++ +M Q G+ P+  TYT  I+  C+      A ++  +M+ SG  P+   Y  L++
Sbjct: 745 AADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIH 804

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           G+ +    ++AL   +  +  G  P    Y CL+  L       EAY
Sbjct: 805 GWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 232/442 (52%), Gaps = 16/442 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
           +F  L+ G +     + A+  F K+ +E  C+P+  +Y  V+N   +K     A  +   
Sbjct: 144 IFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M + +  PN   +S++I+   K G  + A  +L+EM Q+ I P+ FTY+ +I  LC++++
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +    LFL+M      P+   +N++++G CK  +V++A  ++R   + G  P + +Y+ 
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG     + D A   +  M  + IEP+++ Y ++I G +   K+ +AM++  ++ ++G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P     N L+ G  +LG    A++   E+     +P+ +T   L+ G  +NG+V++A 
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNR 457
             F+K+E+     ++ ++ A+IDGLCK G+L+KA+  F K+  IG +P            
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHP------------ 491

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   M+  YC  GL+ +A  +L ++ ++G L D  TYN ++ GF +   ++    
Sbjct: 492 --DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKA 549

Query: 518 LFKELQLKGLRPDSVTYGTLIN 539
             +E+  K    ++ T   L++
Sbjct: 550 FLEEIAGKSFSFEAATVELLMD 571



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 254/577 (44%), Gaps = 83/577 (14%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A +++ +MV+   LP++V+FS L+  L         + +  E+ +  I  ++F  +IV++
Sbjct: 56  AFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV- 270
             C ++R D  + +       G   + V +N LL G     +V +A+ L +   ++    
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P    Y  +++GL +     +A+   R M +   +P+  +Y ++I    + G +  A  L
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L++M+++ I PD + Y+ LI   C L   +  R+L +E+   +  PN  TF  +I G+C+
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
            G V+DA+++   M + G  P V  +N +IDG    G++++A  +F  M           
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM----------- 344

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                                     I+K+ +           P+II+YN LING+ +  
Sbjct: 345 --------------------------INKSIE-----------PNIISYNILINGYARQK 367

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            I+ A+++ +E+  KGL+P  VT   L++GL  + R + A   F +M   G  P    + 
Sbjct: 368 KIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHC 427

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
           +L+                  Y ++  G  +E+M    +  ++ E               
Sbjct: 428 TLLGG----------------YFKN--GLVEEAMSHFHKLERRRE--------------- 454

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            D  +  YT  + GLC++G++ +A   F  L          +   +I G C+ G LD A 
Sbjct: 455 -DTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
           D+      NG +   R  N ++R  L S    ++ A+
Sbjct: 514 DMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAF 550



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 181/354 (51%), Gaps = 4/354 (1%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDL    L  +  G+    + ++ ++I  + K G  + A     +MK+    PD++ Y+
Sbjct: 197 AFDL----LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   +   +     ++ EM+ LN  PN+ TF+ +I+GL K GK E A +++  M ++
Sbjct: 253 TLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ P+  TY ++I G     + D A  +F  M +    P+ ++YN L+NG+ + +++DEA
Sbjct: 313 GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEA 372

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + + R   + G  P + + + L+ GLF   R   A  ++ +M      PD+  +  ++ G
Sbjct: 373 MQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGG 432

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G V++AM     +  R    +   Y A+I G C  G LD+A +   ++      P+
Sbjct: 433 YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPD 492

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
             T+T +I G C+ G++D+A+ +  KME  GC      +N ++ G  ++ ++ +
Sbjct: 493 VITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 160/338 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S VI    K    D     L+E++  ++      +  LI    K+   E     F +M  
Sbjct: 217 SIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH 276

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  P+V  +N+V++   ++     A  +   M++    P+++T++++I+G    G+ + 
Sbjct: 277 LNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDR 336

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++ D M  + I PN  +Y I+I+G  +  + DEA ++  ++   G  P  V  N LL+
Sbjct: 337 AREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLH 396

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G  +L R   A          G +P L ++  L+ G F+    +EA + + K+   + + 
Sbjct: 397 GLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDT 456

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           ++ +Y  +I GL + GK+  A      +   G+ PD   Y A+I G+C  GLLD+A+ + 
Sbjct: 457 NIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            ++     L +  T+ +++ G  R+  V + +    ++
Sbjct: 517 RKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 236/501 (47%), Gaps = 58/501 (11%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           MV++   P ++TF+ LINGL   G+   A  ++++M  +G+  +  TY  +++G+C++  
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
              A  L  KM+++   PD V Y+A+++  CK     +A  L     + G  P + +Y+C
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +IDG     R+ +A    R M E +I PDV+ +  +I    + GK+ +A KL  +M  R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I PDT  YN++I GFC     D A+ +    +   + P+  TF  +I   CR   VD+  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHM----FDLMASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +L  ++ + G   +   +N LI G C+   L  A  LF +M                   
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM------------------- 277

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                                           G  PD IT N L+ GFC+   +  AL+L
Sbjct: 278 -----------------------------ISHGVCPDTITCNILLYGFCENEKLEEALEL 308

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F+ +Q+  +  D+V Y  +I+G+ +  + ++A+ +F  +P +G  P    Y  +++  C 
Sbjct: 309 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 368

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           +   S A  L+   ++D     D S  +  I   L+ GE++ +I+ + EM  + N F   
Sbjct: 369 KSAISDANVLF-HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM--RSNGFSGD 425

Query: 637 PYTIWLIG-LCQDGQVKEALN 656
            +TI ++  L  DG++ ++ +
Sbjct: 426 AFTIKMVADLITDGRLDKSFS 446



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 203/438 (46%), Gaps = 17/438 (3%)

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           M E    P V  +N ++N    +   L A A+  +MV      ++VT+  ++NG+ K G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
           T+ A+ +L +M +  I P+   Y+ +I  LC+     +A  LF +M + G +P+   YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           +++GFC   R  +A  LLR   +    P + +++ LI    +  +  EA     +M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           I PD V Y  MI G  +  +  DA  +   M      PD   +N +I  +C    +D+  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L  EI +R  + NT T+  LI G C    ++ AQ LF +M   G  P     N L+ G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           C+  +LE+A  LF  +++ K                D  +   ++   C    + +A+ +
Sbjct: 297 CENEKLEEALELFEVIQMSKIDL-------------DTVAYNIIIHGMCKGSKVDEAWDL 343

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              L   G  PD+ TYN +I+GFC    I+ A  LF +++  G  PD+ TY TLI G  +
Sbjct: 344 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 403

Query: 544 VDREEDAFRIFGQMPQNG 561
               + +  +  +M  NG
Sbjct: 404 AGEIDKSIELISEMRSNG 421



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 187/382 (48%), Gaps = 41/382 (10%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           ++ VV+  +  +++G  K+GD + AL    KM+E   +PDV IY+A+++   +      A
Sbjct: 42  HIDVVT--YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 99

Query: 153 LAVYYEMVK---------LNCL--------------------------PNIVTFSLLING 177
             ++ EM++          NC+                          P+++TF+ LI+ 
Sbjct: 100 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 159

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             K GK   A K+ DEM  R I P+  TY  +I G C+ NR D+A  +F    D   SPD
Sbjct: 160 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPD 215

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            V +N +++ +C+ +RVDE + LLR   + G V    +Y+ LI G       + A   ++
Sbjct: 216 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 275

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M    + PD +   +++ G  E  K+++A++L   ++   I  DT  YN +I G C   
Sbjct: 276 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 335

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +D+A  L   +      P+  T+ ++I G C    + DA  LF+KM+  G  P    +N
Sbjct: 336 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 395

Query: 418 ALIDGLCKAGELEKANLLFYKM 439
            LI G  KAGE++K+  L  +M
Sbjct: 396 TLIRGCLKAGEIDKSIELISEM 417



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 205/438 (46%), Gaps = 39/438 (8%)

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           M E G+ P    +N LI G C  G + +A +L  ++  +    +  T+  ++ GMC+ G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLS 452
              A  L +KME+    P V +++A+ID LCK G    A  LF +M E G  P +F    
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF---- 116

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +   M++ +C+ G    A ++L  + E    PD++T+N+LI+   K G +
Sbjct: 117 ----------TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 166

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A KL  E+  + + PD+VTY ++I G  + +R +DA  +F  M     +P    + ++
Sbjct: 167 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTI 222

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE----NAIQGLLEMDF 628
           +   CR ++        +Q LR+IS R   +  +    L  G  E    NA Q L +   
Sbjct: 223 IDVYCRAKRVDEG----MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ--- 275

Query: 629 KLNDFQLAPYTI----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           ++    + P TI     L G C++ +++EAL +F V+   K  +   +   +IHG+CK  
Sbjct: 276 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 335

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +D A D+F     +G  + P V  Y +    F   +    A  L  +MK  G++ D   
Sbjct: 336 KVDEAWDLFCSLPIHG--VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 393

Query: 745 YPKTKSLLPGPWNTREME 762
           Y    +L+ G     E++
Sbjct: 394 Y---NTLIRGCLKAGEID 408



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 160/366 (43%), Gaps = 5/366 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+I  L K            E+    ++     +  +I G+   G    A      M E
Sbjct: 84  SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 143

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +  PDV  +NA+++ + ++     A  +  EM+     P+ VT++ +I G  K  + + 
Sbjct: 144 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 203

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  M D M      P+  T+  +I   C+  R DE  +L  ++   G   +   YN L++
Sbjct: 204 AKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 259

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GFC++  ++ A  L +     G  P   + + L+ G    ++ +EA   +  +   KI+ 
Sbjct: 260 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 319

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V Y ++I G+ +  KV +A  L   +   G+ PD   YN +I GFC    +  A  L 
Sbjct: 320 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 379

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++      P+  T+  LI G  + G +D + +L ++M   G F        ++  L   
Sbjct: 380 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG-FSGDAFTIKMVADLITD 438

Query: 427 GELEKA 432
           G L+K+
Sbjct: 439 GRLDKS 444



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 127/264 (48%), Gaps = 11/264 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I G+ K    + A   F  M      PDV  +N ++++  R +     + +  E+ +  
Sbjct: 191 MIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            + N  T++ LI+G  +      A  +  EM   G+ P+  T  I++ G C+  + +EA 
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            LF  ++ S    D VAYN +++G CK  +VDEA  L  S    G  P + +Y+ +I G 
Sbjct: 307 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 366

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                  +A   + KM +   EPD   Y  +IRG  +AG++  +++L+S+MR  G   D 
Sbjct: 367 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 426

Query: 344 YCYNALIKGFCDL---GLLDQARS 364
           +     IK   DL   G LD++ S
Sbjct: 427 F----TIKMVADLITDGRLDKSFS 446



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 35/237 (14%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+  V  + K    G +     ++R  + +  + + +I    + +  +       E+ S 
Sbjct: 221 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 280

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            V   +    +L+ G+ +    E+ALE F  +                            
Sbjct: 281 GVCPDTITCNILLYGFCENEKLEEALELFEVI---------------------------- 312

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
                +M K++   + V ++++I+G+ K  K + A  +   +   G+ P+  TY ++ISG
Sbjct: 313 -----QMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 365

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
            C  +   +A  LF KMKD+G  PD   YN L+ G  K   +D+++ L+     +GF
Sbjct: 366 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 422



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 1/123 (0%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++I G  K    ++A + F  +     +PDV  YN +++    K     A  ++++M 
Sbjct: 324 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 383

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P+  T++ LI G  K+G+ + +I+++ EM   G   + FT  +V + L    R D
Sbjct: 384 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV-ADLITDGRLD 442

Query: 221 EAY 223
           +++
Sbjct: 443 KSF 445


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 177/636 (27%), Positives = 280/636 (44%), Gaps = 49/636 (7%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNV--SVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++ L+  +  DL     D+L  G +  S VS   FVL + + K G+  KAL+    + E
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVME 245

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC--LPNIVTFSLLINGLSKSGKT 184
              +  +   N VL      Q+    +A     + L+C   PN+VTF  LING  K G+ 
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQI---EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEM 302

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A  +   M QRGI P+   Y+ +I G  +       ++LF +    G   D V +++ 
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++ + K   +  A  + +     G  P + +Y+ LI GL +  R  EA+  Y ++ +  +
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
           EP +V Y  +I G  + G ++    L  DM + G  PD   Y  L+ G    GL+  A  
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
             V++  +    N   F  LI G CR    D+A K+F  M   G  P V  F  ++    
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM---- 538

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           +   +E A     K  IG        L Q      D A    ++        I  A K  
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQ---LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             L E    PDI+TYN++I G+C +  ++ A ++F+ L++    P++VT   LI+ L + 
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
           +  + A R+F  M + G  P+   Y  LM W      FS +         DI G    S 
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW------FSKSV--------DIEG----SF 697

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           K  EE  +KG   + +                 Y+I + GLC+ G+V EA NIF   ++ 
Sbjct: 698 KLFEEMQEKGISPSIVS----------------YSIIIDGLCKRGRVDEATNIFHQAIDA 741

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           K +    +   LI G CK G L  A  ++ + L+NG
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 251/518 (48%), Gaps = 23/518 (4%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  LI+G+ K G+ ++A + F  M++   +PD+  Y+ +++  F+  +  +   ++ + +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                 ++V FS  I+   KSG    A  +   M  +GI PN  TYTI+I GLCQ  R  
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA+ ++ ++   G  P  V Y++L++GFCK   +    AL     K G+ P +  Y  L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           DGL +      A  +  KM  + I  +VV++  +I G     +  +A+K+   M   GI 
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 341 PDTYCYNALIK------GFCDLGLLDQARSLQV-EIWKRDSL-PNTHTFTILICGMCRNG 392
           PD   +  +++       FC    +     LQ+ ++ +R+ +  +     ++I  + +  
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKH--MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            ++DA K FN + +    P +  +N +I G C    L++A  +F  +++    T F    
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV----TPF---- 638

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
            G N V    +L  ++   C    +  A ++   +AE G+ P+ +TY  L++ F K  +I
Sbjct: 639 -GPNTV----TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 693

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            G+ KLF+E+Q KG+ P  V+Y  +I+GL +  R ++A  IF Q       P    Y  L
Sbjct: 694 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 753

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEF 610
           +   C+  +   A  L+   LR+    DD   +++ E+
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 791



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 178/405 (43%), Gaps = 53/405 (13%)

Query: 56  KRKRLRSFASNSAVISMLLKP--------NGFDLYWQTLDELRSGNVSVVSDVFFVLISG 107
           KR   +  + N    ++L+K           F +Y Q L   R    S+V+  +  LI G
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK--RGMEPSIVT--YSSLIDG 435

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           + K G+       +  M +    PDV IY  +++   ++ L L A+    +M+  +   N
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT-------------------- 207
           +V F+ LI+G  +  + + A+K+   M   GI P+  T+T                    
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555

Query: 208 ---------------------IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
                                +VI  L + +R ++A + F  + +    PD V YN ++ 
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C LRR+DEA  +    +   F P   + + LI  L +    D A   +  M E+  +P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           + V YG ++   S++  ++ + KL  +M+E+GI P    Y+ +I G C  G +D+A ++ 
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            +      LP+   + ILI G C+ G + +A  L+  M + G  P
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 140/284 (49%), Gaps = 6/284 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF------LLAL 153
           VF  LI G+ ++   ++AL+ F  M  +  +PDV  +  V+ ++  +  F       + L
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            ++  M +     +I   +++I+ L K  + E A K  + + +  + P+  TY  +I G 
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C + R DEA R+F  +K +   P+ V    L++  CK   +D A+ +     + G  P  
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y CL+D   ++   + ++  + +M E+ I P +V Y ++I GL + G+V +A  +   
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             +  ++PD   Y  LI+G+C +G L +A  L   + +    P+
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 118/254 (46%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           I+P +      +  + +     K   P +G + F    + K     A  + VI +L K +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
             +   +  + L  G +      +  +I GY  +   ++A   F  +K     P+     
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            ++++  +      A+ ++  M +    PN VT+  L++  SKS   E + K+ +EM ++
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI P+  +Y+I+I GLC+  R DEA  +F +  D+   PD VAY  L+ G+CK+ R+ EA
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766

Query: 258 LALLRSFEKDGFVP 271
             L     ++G  P
Sbjct: 767 ALLYEHMLRNGVKP 780



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 173/424 (40%), Gaps = 49/424 (11%)

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM--EKAGCFPSVGMFNA--------- 418
           W   S  +   +TI    + RNGM D A K+F++M   +   F  +G             
Sbjct: 92  WAEISGKDPSFYTIAHV-LIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCK 150

Query: 419 -LIDGLCKAGELEKANLLF---------------YKM---EIGKN-----PTLFLRLSQG 454
            L++  C+ G ++KA  +F               Y+M    IG +        F +L +G
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G      ++   +++     G + KA      + E G    I++ N ++ G   V  I  
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEV 269

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A +L   +   G  P+ VT+ TLING  +    + AF +F  M Q G  P    Y +L+ 
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDF 633
              +     +   L+ Q L      D     S I+ +++ G++  A      M  +    
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVEC---KAIVTPPSCVKLIHGLCKRGYLDLAM 690
            +  YTI + GLCQDG++ EA  ++  +++     +IVT  S   LI G CK G L    
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS---LIDGFCKCGNLRSGF 446

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKS 750
            ++   +K G+   P V  Y +     SK    +HA     +M      L+  ++    S
Sbjct: 447 ALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF---NS 501

Query: 751 LLPG 754
           L+ G
Sbjct: 502 LIDG 505


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 223/468 (47%), Gaps = 26/468 (5%)

Query: 115 EKALESFGKMKEFDC-------------QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            K L+SF K+K +               QPD+   N ++N            +V  +++K
Sbjct: 63  NKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P+ +TF+ LI GL   G+   A+   D++  +GI  ++ +Y  +I+G+C+I     
Sbjct: 123 RGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRG 182

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A +L  K+      P+   YN +++  CK + V EA  L       G    + +Y+ LI 
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           G   A +  EA     +M  + I P+V  Y +++  L + GKVK+A  +L+ M +  + P
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKP 302

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   Y+ L+ G+  +  L +A+ +   +      P+ H++TILI G C+N MVD+A  LF
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLF 362

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M +    P +  +++LIDGLCK+G +     L  +M     P              + 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPA-------------NV 409

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  ++++  C  G + +A  +  ++ + G  P   T+  L++G CK G +  A + F++
Sbjct: 410 ITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQD 469

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           L  KG   D   Y  +ING  +    E+A  +  +M +NGC P+   +
Sbjct: 470 LLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 238/478 (49%), Gaps = 13/478 (2%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           + + + A+  F +M      P +  +N +L+   + + +  A+++ + +      P+++T
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LIN     G+      +L ++ +RG  P+  T+T +I GLC   + ++A     K+ 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G   D V+Y  L+NG CK+     A+ L+R  +     P +  Y+ +ID L + +   
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EAY  + +M  + I  DVV Y  +I G   A K+K+A+ LL++M  + I P+ Y YN L+
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
              C  G + +A+++   + K    P+  T++ L+ G      +  AQ +FN M   G  
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P V  +  LI+G CK   +++A  LF +M                N V    +  ++++ 
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEM-------------HQKNMVPGIVTYSSLIDG 383

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C +G I   + ++ ++ + G   ++ITYNSLI+G CK G+++ A+ LF +++ +G+RP 
Sbjct: 384 LCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPC 443

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           S T+  L++GL +  R +DA   F  +   G       Y  ++   C++     A ++
Sbjct: 444 SFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTM 501



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 210/402 (52%), Gaps = 10/402 (2%)

Query: 45  QVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT------LDELRSGNVSVVS 98
           Q+ F F + A   KR   +  ++   + L+K  G  L  Q        D+L +  +    
Sbjct: 109 QITFGFSVLAKILKR--GYQPHTITFTTLIK--GLCLKGQVNKALHFHDKLLAQGIKFDQ 164

Query: 99  DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
             +  LI+G  K+GD   A++   K+     +P+V +YN +++   + QL   A  ++ E
Sbjct: 165 VSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSE 224

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       ++VT++ LI G   + K + AI +L+EM  + I PN +TY I++  LC+  +
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +   M  +   PD + Y+ L++G+  +  + +A  +  +    G  P + SY+ 
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI+G  + K  DEA   +++M ++ + P +V Y  +I GL ++G++     L+ +MR+RG
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           I  +   YN+LI G C  G LD+A +L  ++  +   P + TFTIL+ G+C+ G + DAQ
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME 440
           + F  +   G    V  +N +I+G CK G LE+A  +  KME
Sbjct: 465 EAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 242/549 (44%), Gaps = 51/549 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+   + M      P    +  ++    +I     A  L  +++  G  PD +  N L+N
Sbjct: 43  AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILIN 102

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FC + ++    ++L    K G+ P   +++ LI GL    + ++A  ++ K+  + I+ 
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF 162

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D V YG +I G+ + G  + A+KL+  +  R   P+   YN +I   C   L+ +A  L 
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLF 222

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +    +  T+T LI G C    + +A  L N+M      P+V  +N L+D LCK 
Sbjct: 223 SEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKE 282

Query: 427 GELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++++A N+L   ++    P              D  +  T+++ Y     + KA  +  
Sbjct: 283 GKVKEAKNVLAVMLKACVKP--------------DVITYSTLMDGYFLVYELKKAQHVFN 328

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            ++  G  PD+ +Y  LINGFCK   ++ AL LFKE+  K + P  VTY +LI+GL +  
Sbjct: 329 AMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSG 388

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R    + +  +M   G   +   Y SL+   C+      A +L+              MK
Sbjct: 389 RISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALF------------NKMK 436

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
                          QG+    F         +TI L GLC+ G++K+A   F  L+   
Sbjct: 437 D--------------QGIRPCSF--------TFTILLDGLCKGGRLKDAQEAFQDLLTKG 474

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
             +       +I+G CK+G L+ A+ +     +NG +      + ++ +L    +N K  
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAE 534

Query: 726 AY--HLLCR 732
                ++CR
Sbjct: 535 KLLRQMICR 543



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 167/338 (49%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K       +    E+ +  +S     +  LI G+      ++A+    +M  
Sbjct: 203 NTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+VY YN +++   ++     A  V   M+K    P+++T+S L++G     + + 
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKK 322

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + + M+  G+ P+  +YTI+I+G C+    DEA  LF +M      P  V Y++L++
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK  R+     L+      G    + +Y+ LIDGL +    D A A + KM ++ I P
Sbjct: 383 GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRP 442

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
               + +++ GL + G++KDA +   D+  +G   D Y YN +I G C  GLL++A ++ 
Sbjct: 443 CSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTML 502

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            ++ +   +PN  TF I+I  + +    D A+KL  +M
Sbjct: 503 SKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 122/241 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY+ V + +KA   F  M      PDV+ Y  ++N   + ++   AL ++ EM
Sbjct: 306 TYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEM 365

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            + N +P IVT+S LI+GL KSG+      ++DEM  RGI  N  TY  +I GLC+    
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHL 425

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A  LF KMKD G  P    +  LL+G CK  R+ +A    +     G+   +  Y+ +
Sbjct: 426 DRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVM 485

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +    +EA     KM E    P+ V + ++I  L +  +   A KLL  M  RG+
Sbjct: 486 INGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545

Query: 340 V 340
           +
Sbjct: 546 L 546



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 45/370 (12%)

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLS 452
           VDDA   FN+M      P +  FN ++D   K      A  L +++E+ G  P L     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLI---- 95

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                     +L  ++  +C  G I   + +L ++ + G  P  IT+ +LI G C  G +
Sbjct: 96  ----------TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQV 145

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           N AL    +L  +G++ D V+YGTLING+ ++     A ++  ++      P+  +Y ++
Sbjct: 146 NKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTI 205

Query: 573 MTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           +   C+ +  S A+ L+ +   + IS         I  F    +++ AI  L EM  K  
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTI 265

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           +  +  Y I +  LC++G+VKEA N+ +V++  KA V P                    D
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKNVLAVML--KACVKP--------------------D 303

Query: 692 VFLY-TLKNGFIL--RPRVCNYLLRSLLFSKDNKKVHAYHLL----CRMKSVGYDLDACL 744
           V  Y TL +G+ L    +   ++  ++        VH+Y +L    C+ K V   L+   
Sbjct: 304 VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFK 363

Query: 745 YPKTKSLLPG 754
               K+++PG
Sbjct: 364 EMHQKNMVPG 373



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%)

Query: 30  SKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDEL 89
           S T + +   K K        F    ++  +    + S++I  L K       W  +DE+
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R   +      +  LI G  K G  ++A+  F KMK+   +P  + +  +L+   +    
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A   + +++      ++  ++++ING  K G  E A+ ML +M + G +PN  T+ I+
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDII 520

Query: 210 ISGLCQINRADEAYRLFLKM 229
           I+ L + +  D+A +L  +M
Sbjct: 521 INALFKKDENDKAEKLLRQM 540


>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
 gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 227/507 (44%), Gaps = 51/507 (10%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV---- 160
           I+ Y K G  + A++ F +M   +C+     YN  + +  R   F LA   Y +M     
Sbjct: 16  IASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGF 75

Query: 161 -------------------------------KLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
                                          KL+C+P+I  F++ +N L +  + E A++
Sbjct: 76  SLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALE 135

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           +   M +RG  P+  T+TI+I GLC++ + D A + +L M D G  PD  A  AL  G C
Sbjct: 136 VFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLC 195

Query: 250 KLRRVDEALALLRSFEKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
              +VD A  L+      G   V  L  Y+ LI G  RA R D+A A    M     +PD
Sbjct: 196 DGGQVDLAYELIIGVISGGLSEVSTL-VYNALISGFCRAGRIDKALAMVSFMSRTGCKPD 254

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y V++         ++A+KLL  M    I PD Y YN L+K  C     D+A    V
Sbjct: 255 LVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMV 314

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                    +  ++  +I   C       A KLF +M + G  P V  F  LI    + G
Sbjct: 315 TKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREG 374

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
             + A  L             L L  G   + D+    T+++ +C +G +  A+ I   +
Sbjct: 375 NSDMAKKL-------------LDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDM 421

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  PD+++YN+LINGFCK   +   + L++++  +G  PD VTY  +I  L R ++ 
Sbjct: 422 VEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKL 481

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMT 574
            DA R++ QM + G T    + + L+ 
Sbjct: 482 SDACRVWDQMMERGLTLDRGISEMLIN 508



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 231/476 (48%), Gaps = 18/476 (3%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           I +L++ + FDL      ++     S+ S  +   ISG  +  +          M++  C
Sbjct: 51  IGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHC 110

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PD++ +N  LN+ FR+     AL V+  MV+    P++VTF+++I+GL K  K + A++
Sbjct: 111 VPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQ 170

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP-DFVAYNALLNGF 248
               M  +GI P+      +  GLC   + D AY L + +   G S    + YNAL++GF
Sbjct: 171 FWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGF 230

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+  R+D+ALA++    + G  P L +Y+ L++       ++EA    +KM    IEPDV
Sbjct: 231 CRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDV 290

Query: 309 VLYGVMIRGLSEAGKVKDA-MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
             Y  +++   +A     A + +++ M  +G   D   YN +IK FC +    +A  L  
Sbjct: 291 YSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAFCSISNNRRAYKLFE 349

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+ ++   P+  TFTILI    R G  D A+KL + M   G  P    +  +ID  CK+G
Sbjct: 350 EMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSG 409

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           ++E A+ +F  M E G  P              D  S   ++  +C +  + +   +  Q
Sbjct: 410 KVEMAHSIFCDMVEKGITP--------------DVVSYNALINGFCKSLRVGEVMHLYEQ 455

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           + + G+ PD +TY  +I    +   ++ A +++ ++  +GL  D      LIN +Q
Sbjct: 456 MLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQ 511



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 217/474 (45%), Gaps = 14/474 (2%)

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
           IY   +    +  L   A+ V+ EM    C    + ++  I  L +  + ++A     +M
Sbjct: 11  IYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKM 70

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
              G   + FTY+  ISGLCQ         L   M+   C PD  A+N  LN   +  R 
Sbjct: 71  APLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENRE 130

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
           + AL +     + G  P + +++ +IDGL + K++D A  ++  M ++ I PD      +
Sbjct: 131 ESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVAL 190

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVP-DTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
             GL + G+V  A +L+  +   G+    T  YNALI GFC  G +D+A ++   + +  
Sbjct: 191 AVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTG 250

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  T+ +L+   C   M ++A KL  KME +   P V  +N L+   CKA   +KA 
Sbjct: 251 CKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAY 310

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           L      + K                D  S  T+++ +C+     +AYK+  ++   G  
Sbjct: 311 LFMVTKMVPKGFC-------------DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIA 357

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++T+  LI  F + GN + A KL   +   GL PD + Y T+I+   +  + E A  I
Sbjct: 358 PDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSI 417

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           F  M + G TP    Y +L+   C+  +      L+ Q L+  S  D+ + K I
Sbjct: 418 FCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLI 471



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 216/482 (44%), Gaps = 38/482 (7%)

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I    K+G  + A+K+ DEMT          Y   I  L + +R D A+  + KM   G 
Sbjct: 16  IASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGF 75

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           S     Y+  ++G C+ +       LL+  EK   VP + +++  ++ LFR  R + A  
Sbjct: 76  SLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALE 135

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M E   EPDVV + ++I GL +  K   A++   +M ++GI PD     AL  G C
Sbjct: 136 VFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLC 195

Query: 355 DLGLLDQARSLQVEIWKRD-SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           D G +D A  L + +     S  +T  +  LI G CR G +D A  + + M + GC P +
Sbjct: 196 DGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDL 255

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +N L++  C     E+A  L  KME     P ++              S   +++ +C
Sbjct: 256 VTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVY--------------SYNQLLKAHC 301

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            A    KAY  ++         D+++YN++I  FC + N   A KLF+E+  KG+ PD V
Sbjct: 302 KANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVV 361

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW--- 589
           T+  LI    R    + A ++   M   G  P    Y +++   C+  K  +A S++   
Sbjct: 362 TFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDM 421

Query: 590 ---------LQYLRDISG-----RDDESMKSIEEFLQKGEVENAIQ-----GLLEMDFKL 630
                    + Y   I+G     R  E M   E+ LQ+G   + +      G L  + KL
Sbjct: 422 VEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKL 481

Query: 631 ND 632
           +D
Sbjct: 482 SD 483



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 4/210 (1%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           K  +P   + F +     K      S + +I      +     ++  +E+  G   +  D
Sbjct: 302 KANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEM--GRKGIAPD 359

Query: 100 V--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           V  F +LI  + + G+ + A +    M      PD   Y  +++   +     +A +++ 
Sbjct: 360 VVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFC 419

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +MV+    P++V+++ LING  KS +    + + ++M QRG  P++ TY ++I  L + N
Sbjct: 420 DMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVREN 479

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +  +A R++ +M + G + D      L+N 
Sbjct: 480 KLSDACRVWDQMMERGLTLDRGISEMLINA 509



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           + Y + I  + K G I+ A+K+F E+ L   R   + Y   I  L R  R + A   + +
Sbjct: 10  LIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSK 69

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE------- 609
           M   G + S   Y   ++  C+ ++F+   +L          +D E +  + +       
Sbjct: 70  MAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLL---------KDMEKLHCVPDIWAFNIY 120

Query: 610 ---FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                ++   E+A++    M  +  +  +  +TI + GLC+  +   A+  +  +++   
Sbjct: 121 LNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGI 180

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
                +CV L  GLC  G +DLA ++ +  +  G 
Sbjct: 181 RPDNKACVALAVGLCDGGQVDLAYELIIGVISGGL 215


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 159/583 (27%), Positives = 271/583 (46%), Gaps = 49/583 (8%)

Query: 8   VLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNS 67
           +L I       E ALE L   L    V  V+       V  +FF WA K+   R+F  +S
Sbjct: 69  ILKIFKWGPDAEKALEVLKLKLDIRLVREVLKIDVEVHVKIQFFKWAGKK---RNFEHDS 125

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
                L++          LDE R                    VG+  + ++    M + 
Sbjct: 126 TTYMALIR---------CLDENRL-------------------VGELWRTIQD---MVKS 154

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
            C       + ++ I  R ++   AL+++Y++    C P   T++ +I  L + G  E  
Sbjct: 155 PCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKV 214

Query: 188 IKMLDEMTQRG-ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            ++ +EM   G   P+  TY+ +IS   ++NR D A RLF +MK++G  P    Y  L+ 
Sbjct: 215 HELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMG 274

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            + KL +V+EAL L+        VP + +Y+ LI GL ++ R ++AY  Y+ M ++  +P
Sbjct: 275 IYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKP 334

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG-FCDLGLLDQARSL 365
           DVVL   +I  L  + ++K+A++L  +MR     P+   YN +IK  F D     +A S 
Sbjct: 335 DVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSW 394

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              + K   +P++ T++ILI G C+   V+ A  L  +M++ G  P    + +LI+ L K
Sbjct: 395 LERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 454

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           A   E AN LF +          L+ + G + V   A    M++ +   G  ++A  +  
Sbjct: 455 AKRYEAANELFQE----------LKENCGSSSVRVYA---VMIKHFGKCGRFNEAMGLFN 501

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ + G +PD+  YN+LI G  +   ++ A  LF+ ++  G  PD  ++  ++NGL R  
Sbjct: 502 EMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTG 561

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
             + A  +F +M  +   P    Y +++    R   F  A  L
Sbjct: 562 GPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKL 604



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 197/375 (52%), Gaps = 3/375 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           SA+IS   K N  D   +  DE++   +   + ++  L+  Y+K+G  E+AL    +M+ 
Sbjct: 235 SALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRM 294

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P VY Y  ++    +      A  VY  M+K  C P++V  + LIN L +S + + 
Sbjct: 295 RRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKE 354

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRA--DEAYRLFLKMKDSGCSPDFVAYNAL 244
           A+++ +EM      PN  TY  +I  L + ++A   EA     +MK  G  P    Y+ L
Sbjct: 355 AVELFEEMRLLNCTPNVVTYNTIIKSLFE-DKAPPSEASSWLERMKKDGVVPSSFTYSIL 413

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++GFCK  RV++AL LL   ++ GF P   +Y  LI+ L +AKRY+ A   ++++ E   
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
              V +Y VMI+   + G+  +AM L ++M++ G +PD Y YNALI G     ++D+A S
Sbjct: 474 SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFS 533

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   + +    P+ ++  I++ G+ R G    A ++F KM+ +   P    +N ++  L 
Sbjct: 534 LFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLS 593

Query: 425 KAGELEKANLLFYKM 439
           +AG  E+A  L  +M
Sbjct: 594 RAGLFEEATKLMKEM 608



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 139/577 (24%), Positives = 252/577 (43%), Gaps = 64/577 (11%)

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           +R    +  TY  +I  L +     E +R    M  S C+      + ++    +++ V+
Sbjct: 118 KRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVN 177

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVM 314
           +AL++    +     P  G+Y+ +I  L +   +++ +  Y +M  E    PD V Y  +
Sbjct: 178 KALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSAL 237

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           I    +  +   A++L  +M+E G+ P    Y  L+  +  LG +++A +L  E+  R  
Sbjct: 238 ISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRC 297

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
           +P  +T+T LI G+ ++G V+DA  ++  M K GC P V + N LI+ L ++  L++A  
Sbjct: 298 VPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVE 357

Query: 435 LFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           LF +M +         L+   N V     ++++ E         +A   L ++ + G +P
Sbjct: 358 LFEEMRL---------LNCTPNVVTYNTIIKSLFEDKAPPS---EASSWLERMKKDGVVP 405

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
              TY+ LI+GFCK   +  AL L +E+  KG  P    Y +LIN L +  R E A  +F
Sbjct: 406 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELF 465

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG 614
            ++ +N  + S  VY  ++    +                   GR +E+M    E  + G
Sbjct: 466 QELKENCGSSSVRVYAVMIKHFGK------------------CGRFNEAMGLFNEMKKLG 507

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPS 672
            + +                +  Y   + G+ +   + EA ++F  + E  C   +   +
Sbjct: 508 CIPD----------------VYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHN 551

Query: 673 CVKLIHGLCKRGYLDLAMDVFL----YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYH 728
            +  ++GL + G    AM++F      T+K   +    V   L R+ LF +  K      
Sbjct: 552 II--LNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATK------ 603

Query: 729 LLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
           L+  M S G++ D   Y    S+L       E  NM+
Sbjct: 604 LMKEMNSKGFEYDLITY---SSILEAVGKVDEDRNMA 637



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 123/242 (50%), Gaps = 5/242 (2%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+ ++   V   S  + +LI G+ K    EKAL    +M E    P    Y +++N   +
Sbjct: 395 LERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGK 454

Query: 146 KQLFLLALAVYYEMVKLNCLPNIV-TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
            + +  A  ++ E+ K NC  + V  ++++I    K G+   A+ + +EM + G +P+ +
Sbjct: 455 AKRYEAANELFQEL-KENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVY 513

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y  +I+G+ + +  DEA+ LF  M+++GC+PD  ++N +LNG  +      A+ +    
Sbjct: 514 AYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKM 573

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           +     P   SY+ ++  L RA  ++EA    ++M  +  E D++ Y  ++  +   GKV
Sbjct: 574 KSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV---GKV 630

Query: 325 KD 326
            +
Sbjct: 631 DE 632



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 182/455 (40%), Gaps = 53/455 (11%)

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           + W  K  +   E D   Y  +IR L E   V +  + + DM +          + ++K 
Sbjct: 112 FKWAGK--KRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKI 169

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-CFP 411
              + ++++A S+  ++  R   P   T+  +I  + + G  +   +L+N+M   G CFP
Sbjct: 170 LGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFP 229

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
               ++ALI    K    + A  LF +M E G  PT  +                T++  
Sbjct: 230 DTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKI--------------YTTLMGI 275

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           Y   G + +A  ++ ++     +P + TY  LI G  K G +  A  ++K +   G +PD
Sbjct: 276 YFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPD 335

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            V    LIN L R DR ++A  +F +M    CTP+   Y +++      +      S WL
Sbjct: 336 VVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWL 395

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           + ++                           G++   F         Y+I + G C+  +
Sbjct: 396 ERMKK-------------------------DGVVPSSFT--------YSILIDGFCKTNR 422

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           V++AL +   + E      P +   LI+ L K    + A ++F    +N      RV   
Sbjct: 423 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAV 482

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +++   F K  +   A  L   MK +G   D   Y
Sbjct: 483 MIKH--FGKCGRFNEAMGLFNEMKKLGCIPDVYAY 515



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 100/193 (51%), Gaps = 3/193 (1%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+  ++I+ L K   ++   +   EL+    S    V+ V+I  + K G   +A+  F +
Sbjct: 443 AAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNE 502

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           MK+  C PDVY YNA++    R  +   A +++  M +  C P+I + ++++NGL+++G 
Sbjct: 503 MKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGG 562

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
            + A++M  +M    I P+  +Y  V+  L +    +EA +L  +M   G   D + Y++
Sbjct: 563 PKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSS 622

Query: 244 LLNGFCKLRRVDE 256
           +L    K   VDE
Sbjct: 623 ILEAVGK---VDE 632



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 100/217 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S +I    K N  +     L+E+           +  LI+   K    E A E F ++KE
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                 V +Y  ++    +   F  A+ ++ EM KL C+P++  ++ LI G+ ++   + 
Sbjct: 471 NCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDE 530

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +   M + G  P+  ++ I+++GL +      A  +F KMK S   PD V+YN +L 
Sbjct: 531 AFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLG 590

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
              +    +EA  L++     GF   L +YS +++ +
Sbjct: 591 CLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV 627


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 229/488 (46%), Gaps = 24/488 (4%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL--PNI 168
           VG       +FG +     +PD + +N V+          +ALA+   M +      P+ 
Sbjct: 135 VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDA 194

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            +++++I GL +SGK   A+K+ DEM   G++PN  TY  +I G  +    +  +RL  +
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 254

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M   G  P+ V YN LL+G C+  R+DE   L+         P   +YS L DGL R   
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
                + + +  ++ +        +++ GL + GKV  A ++L  +   G+VP T  YN 
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G+C +  L  A  +  ++  R   P+  T+  LI G+C+  MV  A+ L  +MEK+G
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEI--------------------GKNPTLF 448
             PSV  FN LID    AG+LEK   +   M+                     GK P   
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494

Query: 449 LRLSQG--GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
             L      +   +     ++++ Y  +G   +A+ ++ ++  SG    I+TYN L+ G 
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+   I+ A +L   L+ +GLRPD V+Y T+I+        + A  +  +M + G  P+ 
Sbjct: 555 CRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614

Query: 567 AVYKSLMT 574
             Y +L++
Sbjct: 615 RTYHTLVS 622



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 230/505 (45%), Gaps = 54/505 (10%)

Query: 104 LISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
           ++      GD + AL    +M   E    PD + YN V+   +R      AL V+ EMV 
Sbjct: 163 VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
           +  +PN +T++ +I+G  K G  E   ++ D+M   G  PN  TY +++SGLC+  R DE
Sbjct: 223 MGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDE 282

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC--L 279
              L  +M      PD   Y+ L +G  +       L+L     K G +  LG+Y+C  L
Sbjct: 283 TRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM--LGAYTCSIL 340

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++GL +  +  +A      +    + P  V+Y  +I G  +   ++ A  +   M+ R I
Sbjct: 341 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHI 400

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI-----------C-- 386
            PD   YNALI G C L ++ +A  L +E+ K    P+  TF  LI           C  
Sbjct: 401 RPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFT 460

Query: 387 ----------------------GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
                                   C+NG + +A  + + M      P+  ++N++ID   
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           ++G+ E+A LL  KM   KN  +   +           +   +++  C +  I +A +++
Sbjct: 521 ESGDTEQAFLLVEKM---KNSGVSASI----------VTYNLLLKGLCRSSQIDEAEELI 567

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             L   G  PD+++YN++I+  C  G+ + AL+L +E+   G+RP   TY TL++ L   
Sbjct: 568 YTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASA 627

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVY 569
            R  D   ++ QM      PS ++Y
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIY 652



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 240/501 (47%), Gaps = 16/501 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F+ N  +  +     G D   +  DE+    V      +  +I G+ K GD E      
Sbjct: 194 AFSYNVVIAGLWRSGKGSDA-LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M     +P++  YN +L+   R         +  EM   +  P+  T+S+L +GL+++
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G++   + +  E  ++G++   +T +I+++GLC+  +  +A ++   +  +G  P  V Y
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+NG+C++R +  A  +    +     P   +Y+ LI+GL + +   +A     +M +
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             ++P V  +  +I     AG+++    +LSDM+++GI  D   + +++K FC  G + +
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A ++  ++  +D  PN   +  +I     +G  + A  L  KM+ +G   S+  +N L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 552

Query: 422 GLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLC++ ++++A  L Y +   G  P              D  S  T++   C  G   KA
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRP--------------DVVSYNTIISACCNKGDTDKA 598

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            ++L ++ + G  P + TY++L++     G ++    L++++  K + P S  YG +++ 
Sbjct: 599 LELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658

Query: 541 LQRVDREEDAFRIFGQMPQNG 561
             R + +     +  +M + G
Sbjct: 659 YVRCENDSKVASLKKEMSEKG 679



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 19/454 (4%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           GF L  Q L +    N+      + VL+SG  + G  ++      +M      PD + Y+
Sbjct: 248 GFRLRDQMLHDGPKPNIVT----YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS 303

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            + +   R       L+++ E +K   +    T S+L+NGL K GK   A ++L+ +   
Sbjct: 304 ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 363

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G++P    Y  +I+G CQ+     A+ +F +MK     PD + YNAL+NG CKL  V +A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   EK G  P + +++ LID    A + ++ +     M ++ I+ DV+ +G +++ 
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+ +A+ +L DM  + + P+   YN++I  + + G  +QA  L  ++       +
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ +L+ G+CR+  +D+A++L   +   G  P V  +N +I   C  G+ +KA  L  
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M + G  PTL               +  T+V    +AG +H    +  Q+      P  
Sbjct: 604 EMNKYGIRPTL--------------RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 649

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
             Y  +++ + +  N +    L KE+  KG+  D
Sbjct: 650 SIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 223/515 (43%), Gaps = 20/515 (3%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           LP+  +  +++  L  + R  +    F  +  +G  PD  A+N ++        +D ALA
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 260 LLRSFEKDGFVPRLG--SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           ++R   +    P     SY+ +I GL+R+ +  +A   + +M +  + P+ + Y  MI G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + G ++   +L   M   G  P+   YN L+ G C  G +D+ R L  E+      P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLF 436
             T++IL  G+ R G       LF +  K G        + L++GLCK G++ KA  +L 
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
             +  G  PT  +                T++  YC    +  A+ I  Q+      PD 
Sbjct: 359 MLVHTGLVPTTVI--------------YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH 404

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
           ITYN+LING CK+  +  A  L  E++  G+ P   T+ TLI+      + E  F +   
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGE 615
           M Q G       + S++   C+  K   A ++    + +D++         I+ +++ G+
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
            E A   + +M        +  Y + L GLC+  Q+ EA  +   L          S   
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +I   C +G  D A++  L    N + +RP +  Y
Sbjct: 585 IISACCNKGDTDKALE--LLQEMNKYGIRPTLRTY 617



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/562 (25%), Positives = 244/562 (43%), Gaps = 29/562 (5%)

Query: 213 LCQINRADEAYRLFLKMKDSGCS-------PDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           LCQ + A     L     D  C+       P   + N LL     + R  +  A      
Sbjct: 90  LCQPDGALRLLSLLASAGDGACAGEVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLV 149

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM--FEEKIEPDVVLYGVMIRGLSEAGK 323
             G  P   +++ ++     A   D A A  R+M   E    PD   Y V+I GL  +GK
Sbjct: 150 AAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGK 209

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
             DA+K+  +M + G+VP+   YN +I G    G L+    L+ ++      PN  T+ +
Sbjct: 210 GSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNV 269

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G+CR G +D+ + L ++M     FP    ++ L DGL + GE  +  L  +   + K
Sbjct: 270 LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE-SRTMLSLFAESLKK 328

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
              L               +   ++   C  G + KA ++L  L  +G +P  + YN+LI
Sbjct: 329 GVML------------GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NG+C+V ++ GA  +F++++ + +RPD +TY  LINGL +++    A  +  +M ++G  
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQG 622
           PS   + +L+       +    F++     +     D  S  S ++ F + G++  A+  
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           L +M +K        Y   +    + G  ++A  +   +       +  +   L+ GLC+
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 556

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDL 740
              +D A +  +YTL+N   LRP V +Y  ++ +     D  K  A  LL  M   G   
Sbjct: 557 SSQIDEAEE-LIYTLRNQG-LRPDVVSYNTIISACCNKGDTDK--ALELLQEMNKYGIRP 612

Query: 741 DACLYPKTKSLLPGPWNTREME 762
               Y    S L       +ME
Sbjct: 613 TLRTYHTLVSALASAGRVHDME 634



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/171 (18%), Positives = 76/171 (44%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I   ++    +  +  ++++++  VS     + +L+ G  +    ++A E    ++ 
Sbjct: 513 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  YN +++    K     AL +  EM K    P + T+  L++ L+ +G+   
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
              +  +M  + + P+   Y I++    +     +   L  +M + G + D
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 258/544 (47%), Gaps = 31/544 (5%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
           P      F  +A +    +  S S ++ +L+  N F      L +L SG +S  S     
Sbjct: 19  PLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSS 78

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L   ++++   +  L+SF           V I+ A++N   R QL   AL  + +M+   
Sbjct: 79  L---FHEL--TQPHLDSF--------PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRG 125

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P   TF+ L+  L KS   E A ++ +E T+  +  + +++ I+I G C++   D+ +
Sbjct: 126 LVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGF 184

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  +M++ G SP+ V Y  L++G CK   ++    L     +   V    +Y+ LI+G 
Sbjct: 185 EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGF 244

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F+     +    Y KM    I P+V  Y  MI      GK+ +A +L  +MRERG+  + 
Sbjct: 245 FKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNV 304

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFN 402
             YN LI G C    + +A  L   + KRD L PN  ++  LI G C  G +D A  LFN
Sbjct: 305 VTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFN 363

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M+ +G  PS+  +N LI G  +A        +  +ME  G +P+              K
Sbjct: 364 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS--------------K 409

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++    +  I KA++I   + ++G + DI  Y  LI+G C VG++  A KLFK 
Sbjct: 410 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           L    L+P+ V Y T+I G  +      A R+  +M +NG  P+ A Y S +   C+  K
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529

Query: 582 FSLA 585
           ++ A
Sbjct: 530 WTEA 533



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 37/455 (8%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           L    + +  ++++ P+    +F     R  +    + + ++ +L+K N F+  W+  +E
Sbjct: 96  LIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE 155

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
            + GNV +    F ++I G  +VG  +K  E  G+M+E    P+V +Y  +++   +   
Sbjct: 156 TK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGD 214

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSK---------------------------- 180
                 ++Y+M +L+ + N  T+++LING  K                            
Sbjct: 215 IERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNS 274

Query: 181 -------SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
                   GK   A ++ DEM +RG+  N  TY  +I GLCQ  R  EA RL  +MK  G
Sbjct: 275 MICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG 334

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            SP+ ++YN L++G+C +  +D+A +L    +  G  P L +Y+ LI G   AK      
Sbjct: 335 LSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVT 394

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              R+M    + P  V Y +++  L  +  ++ A ++ S M + G+V D Y Y  LI G 
Sbjct: 395 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 454

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C +G + +A  L   + +    PN   +  +I G C+ G    A +L  +M + G  P+V
Sbjct: 455 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 514

Query: 414 GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
             +N+ I  LCK  +  +A +L   M E+G  P++
Sbjct: 515 ASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSI 549



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 213/455 (46%), Gaps = 14/455 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+AL  F +M      P    +N +L +  +   F  A  V+ E  K N   ++ +F ++
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIM 170

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I G  + G  +   ++L +M + G+ PN   YT +I G C+    +   +LF KM +   
Sbjct: 171 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 230

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             +   Y  L+NGF K+    + + L    +  G VP + +Y+ +I       + + A+ 
Sbjct: 231 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 290

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M E  +  +VV Y  +I GL +  +V +A +L+  M+  G+ P+   YN LI G+C
Sbjct: 291 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 350

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
            +G LD+A SL  ++      P+  T+ ILI G            +  +ME  G  PS  
Sbjct: 351 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 410

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L+D L ++  +EKA  ++  ME                 V D      ++   C  
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSME-------------KAGLVADIYIYGVLIHGLCVV 457

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K+   L E    P+ + YN++I G+CK G+   AL+L KE+   G+ P+  +Y
Sbjct: 458 GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 517

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            + I  L + ++  +A  +   M + G  PS +++
Sbjct: 518 NSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIW 552



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 231/532 (43%), Gaps = 88/532 (16%)

Query: 155 VYYEMVK--LNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           +++E+ +  L+  P +++    +IN   +S   E A+   ++M  RG++P   T+  ++ 
Sbjct: 79  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLI 138

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            L + N  ++A+R+F + K +    D  ++  ++ G C++  +D+   +L   E+ G   
Sbjct: 139 LLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG--- 194

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
                                           + P+VV+Y  +I G  + G ++   +L 
Sbjct: 195 --------------------------------LSPNVVVYTTLIDGCCKNGDIERGKQLF 222

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M E  +V + Y Y  LI GF  +GL      L  ++     +PN +T+  +IC  C +
Sbjct: 223 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 282

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G +++A +LF++M + G   +V  +N LI GLC+   + +A  L  +M+  G +P L   
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI-- 340

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       S  T+++ YC+ G + KA  +  Q+  SG  P + TYN LI GF +  
Sbjct: 341 ------------SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 388

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N  G   + +E++ +GL P  VTY  L++ L R D  E AF+I+  M + G      +Y 
Sbjct: 389 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 448

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C                  + G   E+ K               + L EM  K 
Sbjct: 449 VLIHGLC------------------VVGDMKEASK-------------LFKSLDEMHLKP 477

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           ND     Y   + G C++G    AL +   + E   +    S    I  LCK
Sbjct: 478 ND---VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCK 526



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 4/279 (1%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N F+L+    DE+R   V+     +  LI G  +     +A     +MK     P++  Y
Sbjct: 287 NAFELF----DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +++          A +++ +M      P++ T+++LI G S++  +     M+ EM  
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+ P+K TYTI++  L + +  ++A++++  M+ +G   D   Y  L++G C +  + E
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 462

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L +S ++    P    Y+ +I G  +      A    ++M E  + P+V  Y   I+
Sbjct: 463 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQ 522

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            L +  K  +A  LL DM E G+ P    +N + K   D
Sbjct: 523 ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 561


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 258/553 (46%), Gaps = 26/553 (4%)

Query: 2   SSTLNEVLTILDTVTPIEPALEP--------LLPFLSKTTVTSVIMKTKNPQVGFRFFIW 53
           S  + ++L +LD  + +E  L+         L P      + SV ++ K P+V  RFF W
Sbjct: 81  SPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREK-PEVAVRFFFW 139

Query: 54  AAKRKR-LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           A K+K+ +     + ++I +L              EL+   + +       LI  +  +G
Sbjct: 140 AGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLG 199

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E+ L  + +MKE    P +Y YN ++N          A  V+  M     +P+ VT++
Sbjct: 200 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 259

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           ++I G  K+GK + A++   +M  + + P+K TY  +I         D    L+L+M++ 
Sbjct: 260 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 319

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G      +Y+ ++ G CK R+  EA A+  +  + G    +  Y+ LID   +    +EA
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 379

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + +M  E  EPD V Y V++ GL ++G++ D M+L    R +G+  +   Y +LI G
Sbjct: 380 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 439

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
               G ++ A +L  E+ ++    +++ +  +I  + ++G +D A  LF +ME+ GC  +
Sbjct: 440 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 499

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           V  F  LIDGL K  + E+A   + KM + G  PT+              AS + +    
Sbjct: 500 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTV--------------ASFRALAIGL 545

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A KIL  LA  G +P+   +  +IN  CK   I  A KL   +  +G     
Sbjct: 546 CLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRGREIPG 604

Query: 532 VTYGTLINGLQRV 544
                LIN L++ 
Sbjct: 605 RIRTVLINALRKA 617



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 262/588 (44%), Gaps = 69/588 (11%)

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VKL+  PN VTF  ++  +    K EVA++      ++    +K    + +  L   +  
Sbjct: 110 VKLS--PNFVTF--VLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSAD 165

Query: 220 DEAYRL-FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
               RL F ++KD G      A N+L+  F  L  V+E L + R  +++G  P L +Y+ 
Sbjct: 166 LVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNF 225

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++GL  +   + A   +  M   KI PD V Y +MI+G  +AGK++ AM+   DM  + 
Sbjct: 226 LVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKN 285

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y  LI+        D   SL +E+ +R      H+++++I G+C+     +A 
Sbjct: 286 VKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAY 345

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            +F  M + GC                     +AN+  Y                     
Sbjct: 346 AVFETMNQKGC---------------------RANVAIY--------------------- 363

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                   +++ Y   G + +A ++  ++   G  PD +TY+ L+NG CK G ++  ++L
Sbjct: 364 ------TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 417

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F   + KG+  +++ Y +LI+GL +  R EDA  +F +M + GC      Y +++    +
Sbjct: 418 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 477

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             K   A +L+ +   +     D+++ +    I+   ++ + E AI+   +M  K     
Sbjct: 478 HGKIDQALALFGRMEEEGC---DQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 534

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +A +    IGLC  G+V  A  I   L     I+   +   +I+ LCK   +  A     
Sbjct: 535 VASFRALAIGLCLCGKVARACKILDDLAPM-GIIPETAFEDMINTLCKAQRIKEAC---- 589

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS---VGYD 739
             L +G + R R     +R++L +   K  ++  ++  M S   +GYD
Sbjct: 590 -KLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYD 636


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 22/420 (5%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L +SG  E+ ++ L +M   GI     ++T V+ GLC+      A  L  ++   G  P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             + YN LLNG+ +++ V     +L   EK+     + +Y+ LI+   R+ + +EA   +
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M ++ IEPDV +Y  +I    + G +K A  L  +M ER +VP+ Y Y ALI G C  
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +  A  +  ++  +    N   F  L+ G C+ GM+D+A +L N M++ G        
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 401

Query: 417 NALIDGLCKAGELEKANLLFYKME---IGKNPTLF-------------------LRLSQG 454
           N +  G C++   E+A  L   ME   +  N   F                    ++ + 
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 461

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
             +     +    +E+YC  G + +AYK++ ++ E G +PD  TY SLI+G    GN++ 
Sbjct: 462 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 521

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL+LF E+   GL  + VTY  +I+GL +  R ++AF+++ +M + G  P   +Y SL+ 
Sbjct: 522 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 581



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 184/330 (55%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +    E+A + F +M +   +PDVYIY +++N   +      A  ++ EM
Sbjct: 260 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 319

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   +PN  T+  LING  K+G+ + A  M+++M  +G+  N+  +  ++ G C+    
Sbjct: 320 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 379

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA RL   M+  G   D    N + +GFC+  R +EA  LL + E+ G  P + S+S L
Sbjct: 380 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   + + + EA   ++ M ++   P VV Y   I    + GK+++A KL+++M+ERG+
Sbjct: 440 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PDTY Y +LI G    G +D+A  L  E+ +     N  T+T++I G+ ++G  D+A K
Sbjct: 500 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 559

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           L+++M K G  P  G++++LI  L K G L
Sbjct: 560 LYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 4/335 (1%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR 61
           SS + E   + D +  ++  +EP +     T++ +   K  N +  F  F    +R+ + 
Sbjct: 271 SSKIEEAEKLFDEM--LKKGIEPDVYIY--TSIINWNCKFGNMKRAFVLFDEMTERRLVP 326

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  +  A+I+   K          +++++S  V V   +F  L+ GY K G  ++AL   
Sbjct: 327 NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQ 386

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M++   + D +  N + +   R      A  +   M +    PN+V+FS+LI+   K 
Sbjct: 387 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKE 446

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
                A ++   M ++G  P+  TY   I   C+  + +EAY+L  +M++ G  PD   Y
Sbjct: 447 QNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTY 506

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            +L++G      VD AL L     + G    + +Y+ +I GL +  R DEA+  Y +M +
Sbjct: 507 TSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNK 566

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           E I PD  +Y  +I  L + G +   ++ + D  E
Sbjct: 567 EGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 601



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 3/276 (1%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S   +V+  C  G + +A  ++ +L   G  P +ITYN+L+NG+ ++ ++ G  ++   +
Sbjct: 190 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 249

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +   +  +  TY  LI    R  + E+A ++F +M + G  P   +Y S++ W+C+    
Sbjct: 250 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 309

Query: 583 SLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
             AF L+ +   R +          I    + GE++ A   + +M  K  D     +   
Sbjct: 310 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G C+ G + EAL + +++ +    +   +C  +  G C+    + A  + L   + G 
Sbjct: 370 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG- 428

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            + P V ++ +   ++ K+     A  L   M+  G
Sbjct: 429 -VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +    + L Q+ +SG    + ++ ++++G CK G +  A  L  EL  KG +P  +T
Sbjct: 166 SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVIT 225

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TL+NG   +        I   M +N    +   Y  L+ W  R               
Sbjct: 226 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSR--------------- 270

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
              S + +E+ K  +E L+KG         +E D  +       YT  +   C+ G +K 
Sbjct: 271 ---SSKIEEAEKLFDEMLKKG---------IEPDVYI-------YTSIINWNCKFGNMKR 311

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A  +F  + E + +    +   LI+G CK G +  A  +       G  +   + N L+ 
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
              + K      A  L   M+  G+++DA
Sbjct: 372 G--YCKKGMIDEALRLQNIMQQKGFEIDA 398


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 22/420 (5%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L +SG  E+ ++ L +M   GI     ++T V+ GLC+      A  L  ++   G  P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
             + YN LLNG+ +++ V     +L   EK+     + +Y+ LI+   R+ + +EA   +
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M ++ IEPDV +Y  +I    + G +K A  L  +M ER +VP+ Y Y ALI G C  
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G +  A  +  ++  +    N   F  L+ G C+ GM+D+A +L N M++ G        
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC 405

Query: 417 NALIDGLCKAGELEKANLLFYKME---IGKNPTLF-------------------LRLSQG 454
           N +  G C++   E+A  L   ME   +  N   F                    ++ + 
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 465

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
             +     +    +E+YC  G + +AYK++ ++ E G +PD  TY SLI+G    GN++ 
Sbjct: 466 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 525

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           AL+LF E+   GL  + VTY  +I+GL +  R ++AF+++ +M + G  P   +Y SL+ 
Sbjct: 526 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 585



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 184/330 (55%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LI  Y +    E+A + F +M +   +PDVYIY +++N   +      A  ++ EM
Sbjct: 264 TYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEM 323

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   +PN  T+  LING  K+G+ + A  M+++M  +G+  N+  +  ++ G C+    
Sbjct: 324 TERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 383

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA RL   M+  G   D    N + +GFC+  R +EA  LL + E+ G  P + S+S L
Sbjct: 384 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ID   + + + EA   ++ M ++   P VV Y   I    + GK+++A KL+++M+ERG+
Sbjct: 444 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           +PDTY Y +LI G    G +D+A  L  E+ +     N  T+T++I G+ ++G  D+A K
Sbjct: 504 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 563

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
           L+++M K G  P  G++++LI  L K G L
Sbjct: 564 LYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 155/335 (46%), Gaps = 4/335 (1%)

Query: 2   SSTLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR 61
           SS + E   + D +  ++  +EP +     T++ +   K  N +  F  F    +R+ + 
Sbjct: 275 SSKIEEAEKLFDEM--LKKGIEPDVYIY--TSIINWNCKFGNMKRAFVLFDEMTERRLVP 330

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +  +  A+I+   K          +++++S  V V   +F  L+ GY K G  ++AL   
Sbjct: 331 NAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQ 390

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M++   + D +  N + +   R      A  +   M +    PN+V+FS+LI+   K 
Sbjct: 391 NIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKE 450

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
                A ++   M ++G  P+  TY   I   C+  + +EAY+L  +M++ G  PD   Y
Sbjct: 451 QNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTY 510

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            +L++G      VD AL L     + G    + +Y+ +I GL +  R DEA+  Y +M +
Sbjct: 511 TSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNK 570

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           E I PD  +Y  +I  L + G +   ++ + D  E
Sbjct: 571 EGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 605



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 125/276 (45%), Gaps = 3/276 (1%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S   +V+  C  G + +A  ++ +L   G  P +ITYN+L+NG+ ++ ++ G  ++   +
Sbjct: 194 SWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLM 253

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +   +  +  TY  LI    R  + E+A ++F +M + G  P   +Y S++ W+C+    
Sbjct: 254 EKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNM 313

Query: 583 SLAFSLWLQYL-RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW 641
             AF L+ +   R +          I    + GE++ A   + +M  K  D     +   
Sbjct: 314 KRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + G C+ G + EAL + +++ +    +   +C  +  G C+    + A  + L   + G 
Sbjct: 374 MDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG- 432

Query: 702 ILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
            + P V ++ +   ++ K+     A  L   M+  G
Sbjct: 433 -VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +    + L Q+ +SG    + ++ ++++G CK G +  A  L  EL  KG +P  +T
Sbjct: 170 SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVIT 229

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y TL+NG   +        I   M +N    +   Y  L+ W  R               
Sbjct: 230 YNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSR--------------- 274

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
              S + +E+ K  +E L+KG         +E D  +       YT  +   C+ G +K 
Sbjct: 275 ---SSKIEEAEKLFDEMLKKG---------IEPDVYI-------YTSIINWNCKFGNMKR 315

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A  +F  + E + +    +   LI+G CK G +  A  +       G  +   + N L+ 
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
              + K      A  L   M+  G+++DA
Sbjct: 376 G--YCKKGMIDEALRLQNIMQQKGFEIDA 402


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 212/438 (48%), Gaps = 15/438 (3%)

Query: 136 YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
           +N +L    + + +L  +++  +M       N+VT S+LIN     G+   +  +L ++ 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           + G  PN  T+T ++ GLC      +      K+       + V+Y  LLNG CK     
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETR 132

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            A+ LLR  E     P +  YS +IDGL + K  +EAY  Y +M   +I P+V+ Y  +I
Sbjct: 133 CAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
                AG++  A  LL +M  + I PD Y ++ LI   C  G    A+ +   + +    
Sbjct: 193 CAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVN 250

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN +++ I+I G+C+   VD+A  L  +M      P    +N+LIDGLCK+G +  A  L
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +M     P              D  +  ++++  C    + KA  + M++ E G  P 
Sbjct: 311 MNEMHHRGQPA-------------DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + TY +LI+G CK G +  A +LF+ L +KG   D  TY  +I+GL +    ++A  I  
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 556 QMPQNGCTPSPAVYKSLM 573
           +M  NGC P+   ++ ++
Sbjct: 418 KMEDNGCIPNAVTFEIII 435



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 205/405 (50%), Gaps = 17/405 (4%)

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           +++KL   PN +T++ L+ GL   G+ +  +   D++  +    N+ +Y  +++GLC+  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
               A +L   ++D    P+ V Y+A+++G CK + V+EA  L    +     P + +Y+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI     A +   A++   +M  + I PDV  + ++I  L + G  K+A ++   M + 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+ P+ Y YN +I G C    +D+A +L  E+  ++ +P+T T+  LI G+C++G +  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGN 456
             L N+M   G    V  + +L+D LCK   L+KA  LF KM E G  PT++        
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY-------- 359

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                 +   +++  C  G +  A ++   L   G   D+ TY  +I+G CK G  + AL
Sbjct: 360 ------TYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 413

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
            +  +++  G  P++VT+  +I  L   D  + A ++  +M   G
Sbjct: 414 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 15/425 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+ +  +G    +    GK+ +    P+   +  ++     K      L  + ++V  
Sbjct: 50  ILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQ 109

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
               N V++  L+NGL K+G+T  AIK+L  +  R   PN   Y+ +I GLC+    +EA
Sbjct: 110 AFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEA 169

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           Y L+ +M      P+ + YN L+  FC   ++  A +LL         P + ++S LID 
Sbjct: 170 YDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDA 229

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L   K    A   +  M +  + P+V  Y +MI GL +  +V +AM LL +M  + +VPD
Sbjct: 230 L--CKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 287

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           T  YN+LI G C  G +  A +L  E+  R    +  T+T L+  +C+N  +D A  LF 
Sbjct: 288 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFM 347

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           KM++ G  P++  + ALIDGLCK G L+ A  LF  +           L +G     D  
Sbjct: 348 KMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL-----------LVKGC--CIDVW 394

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C  G+  +A  I  ++ ++G +P+ +T+  +I    +    + A KL  E+
Sbjct: 395 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454

Query: 523 QLKGL 527
             KGL
Sbjct: 455 IAKGL 459



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 15/421 (3%)

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
           I+ F+ ++  L K       I +  +M  +GI  N  T +I+I+  C + +   ++ L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           K+   G  P+ + +  L+ G C    V + L          F     SY  L++GL +  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
               A    R + +    P+VV+Y  +I GL +   V +A  L S+M  R I P+   YN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
            LI  FC  G L  A SL  E+  ++  P+ +TF+ILI  +C+ G   +A+++F+ M + 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P+V  +N +I+GLCK   +++A  L             LR     N V D  +  ++
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNL-------------LREMLHKNMVPDTVTYNSL 294

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++  C +G I  A  ++ ++   G   D++TY SL++  CK  N++ A  LF +++ +G+
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 354

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +P   TY  LI+GL +  R ++A  +F  +   GC      Y  +++  C+   F  A +
Sbjct: 355 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 414

Query: 588 L 588
           +
Sbjct: 415 I 415



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 198/433 (45%), Gaps = 51/433 (11%)

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
           +M   G   + V  + L+N FC L ++  + +LL    K G+ P   +++ L+ GL    
Sbjct: 35  QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94

Query: 288 RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
              +   ++ K+  +  + + V YG ++ GL + G+ + A+KLL  + +R   P+   Y+
Sbjct: 95  EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           A+I G C   L+++A  L  E+  R+  PN  T+  LIC  C  G +  A  L ++M   
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
              P V  F+ LID LCK G  + A  +F+ M ++G NP ++              S   
Sbjct: 215 NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVY--------------SYNI 258

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           M+   C    + +A  +L ++     +PD +TYNSLI+G CK G I  AL L  E+  +G
Sbjct: 259 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
              D VTY +L++ L +    + A  +F +M + G  P+   Y +L+   C+        
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK-------- 370

Query: 587 SLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
                      GR   + +  +  L KG                    +  YT+ + GLC
Sbjct: 371 ----------GGRLKNAQELFQHLLVKGCC----------------IDVWTYTVMISGLC 404

Query: 647 QDGQVKEALNIFS 659
           ++G   EAL I S
Sbjct: 405 KEGMFDEALAIKS 417



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 169/321 (52%), Gaps = 4/321 (1%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E RS   +VV  ++  +I G  K     +A + + +M   +  P+V  YN ++       
Sbjct: 142 EDRSTRPNVV--MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAG 199

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             + A ++ +EM+  N  P++ TFS+LI+ L K GK   A ++   M Q G+ PN ++Y 
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQIFHAMVQMGVNPNVYSYN 257

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           I+I+GLC+  R DEA  L  +M      PD V YN+L++G CK  R+  AL L+      
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G    + +Y+ L+D L + +  D+A A + KM E  I+P +  Y  +I GL + G++K+A
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +L   +  +G   D + Y  +I G C  G+ D+A +++ ++     +PN  TF I+I  
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 388 MCRNGMVDDAQKLFNKMEKAG 408
           +      D A+KL ++M   G
Sbjct: 438 LFEKDENDKAEKLLHEMIAKG 458



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 220/504 (43%), Gaps = 54/504 (10%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP  + +N +L    KL+     ++L +  +  G    L + S LI+      +   +++
Sbjct: 8   SP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              K+ +    P+ + +  +++GL   G+VK  +     +  +    +   Y  L+ G C
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G    A  L   I  R + PN   ++ +I G+C++ +V++A  L+++M+    FP+V 
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI   C AG+L  A  L ++M +   NP ++              +   +++  C 
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY--------------TFSILIDALCK 232

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G    A +I   + + G  P++ +YN +ING CK   ++ A+ L +E+  K + PD+VT
Sbjct: 233 EG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 290

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y +LI+GL +  R   A  +  +M   G       Y SL+   C+ +    A +L+++  
Sbjct: 291 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK-- 348

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                     MK           E  IQ             +  YT  + GLC+ G++K 
Sbjct: 349 ----------MK-----------ERGIQP-----------TMYTYTALIDGLCKGGRLKN 376

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLR 713
           A  +F  L+     +   +   +I GLCK G  D A+ +      NG I        ++R
Sbjct: 377 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 436

Query: 714 SLLFSKDNKKVHAYHLLCRMKSVG 737
           SL    +N K  A  LL  M + G
Sbjct: 437 SLFEKDENDK--AEKLLHEMIAKG 458



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 135/258 (52%), Gaps = 2/258 (0%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L E+   N++     F +LI    K G  + A + F  M +    P+VY YN ++N 
Sbjct: 205 FSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMING 262

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             + +    A+ +  EM+  N +P+ VT++ LI+GL KSG+   A+ +++EM  RG   +
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYT ++  LC+    D+A  LF+KMK+ G  P    Y AL++G CK  R+  A  L +
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 382

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                G    + +Y+ +I GL +   +DEA A   KM +    P+ V + ++IR L E  
Sbjct: 383 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 442

Query: 323 KVKDAMKLLSDMRERGIV 340
           +   A KLL +M  +G++
Sbjct: 443 ENDKAEKLLHEMIAKGLL 460



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 16/250 (6%)

Query: 37  VIMKTKNPQV-GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF---------------D 80
           +I+K  NP V  F   I A  ++   +     A++ M + PN +               D
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 270

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
                L E+   N+   +  +  LI G  K G    AL    +M       DV  Y ++L
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
           +   + Q    A A++ +M +    P + T++ LI+GL K G+ + A ++   +  +G  
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            + +TYT++ISGLC+    DEA  +  KM+D+GC P+ V +  ++    +    D+A  L
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450

Query: 261 LRSFEKDGFV 270
           L      G +
Sbjct: 451 LHEMIAKGLL 460


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 232/477 (48%), Gaps = 13/477 (2%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           D  +A E  GK+      P+V  Y   +    +  LF +A  +   + + N   N   F+
Sbjct: 225 DIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFN 284

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
            +I GL + G  + A ++  EM   GILP+ ++Y+I+I G C+  R D+A  +F +M++S
Sbjct: 285 AVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G  P+  +Y+ L++GFCK  RVD+AL +    +  G +P + SYS LIDG  R    D A
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
             ++ +M      P    Y  +I+G  ++ +  +A+K    M++ G+ PDT   N ++  
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           +C     ++A +L  +  +     N +++   I  +CR  + + A +L   M K    P 
Sbjct: 465 YCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD 524

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           V  ++ LI    K    EKA +LF KM            ++ G   + K +   ++  + 
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKM------------TKVGITFNVK-TYTILINLFI 571

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
           +   +  AY++   + ES   PD I Y SL+ GFC  G +  A  LF E+  +G  P+ V
Sbjct: 572 SDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVV 631

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           TY   IN   ++++   A +++ +M + G  P   +Y  L+   C   + + A +L+
Sbjct: 632 TYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 249/517 (48%), Gaps = 23/517 (4%)

Query: 70  ISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           I  L K   F + W+ +  L   N  + +  F  +I G  + G  ++A E F +MK    
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
            PDVY Y+ +++   RK     A  V+ EM     LPNI ++S+LI+G  K G+ + A++
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + +EM   GILP+ ++Y+I+I G C+    D A + + +M  +  SP    Y +L+ G+ 
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYY 431

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K ++   AL   R  +K G  P   + + ++    R   +++A A   K  E  +  +  
Sbjct: 432 KSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 491

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y   I  +      + A++LL  M +R ++PD   Y+ LI  F      ++A  L +++
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            K     N  T+TILI     +  +D A +LF  M+++  +P    + +L+ G C  GE+
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611

Query: 430 EKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
            +A  LF +M   G +P +               +    + +Y      ++A+K+  ++ 
Sbjct: 612 TRARALFDEMSREGCSPNV--------------VTYTCFINEYLKLNKNNQAHKLYEKMK 657

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG-LRPDSVTYGTLINGLQRVDRE 547
           E G  PD I Y  LI  FC  G +N A  LF E++ +G   P+ V Y  LIN   ++++ 
Sbjct: 658 ERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKR 717

Query: 548 EDAFRIFGQMPQNG----CTPSPAVYKSLMTWSCRRR 580
           + A +++ +M   G    C+   +V +S   W CR +
Sbjct: 718 DQAEKLYEEMRAKGLSRLCSSEGSVSES---WCCRHQ 751



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 225/465 (48%), Gaps = 20/465 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGKM 124
           +AVI  L +    D   +   E++  N  ++ DV+   +LI G+ + G  ++A E F +M
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMK--NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +     P++Y Y+ +++   ++     AL V+ EM     LP++ ++S+LI+G  + G  
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + AIK  +EMT     P+ F Y  +I G  +  +   A + F  M+  G  PD +A N +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           L+ +C+    ++ALAL   F+++G      SY+  I  + R    ++A      M +  +
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PDVV Y  +I   ++    + A+ L   M + GI  +   Y  LI  F     +D A  
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L   + +    P+   +T L+ G C  G +  A+ LF++M + GC P+V  +   I+   
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           K  +  +A+ L+ KM E G  P              D+     ++  +C  G +++A  +
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYP--------------DQILYTMLIAAFCNTGEMNRAEAL 687

Query: 484 LMQLAESGN-LPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
             ++ + G   P+++ Y  LIN + K+   + A KL++E++ KGL
Sbjct: 688 FDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 150/594 (25%), Positives = 249/594 (41%), Gaps = 50/594 (8%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V F +LI   + +   E A  +       GI  N  +   ++  L + NR D    LF  
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           +   G  P+   Y  ++N FC  R V  ++ + R+ E  G                    
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFC--RGVGCSVDIRRASEILG-------------------- 234

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
                    K++     P+VV YG  I+GL + G    A +L+ ++  +    + +C+NA
Sbjct: 235 ---------KIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNA 285

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +I G C  G+LD+A  +  E+     LP+ ++++ILI G CR G VD A ++F +M  +G
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P++  ++ LIDG CK G ++KA  +F +M   KN  +          + D  S   ++
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEM---KNSGI----------LPDVYSYSILI 392

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +C  G +  A K   ++  +   P    Y SLI G+ K      ALK F+ +Q  G+ 
Sbjct: 393 DGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMW 452

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD++    +++   R      A  +  +  +NG   +P  Y   +   CR      A  L
Sbjct: 453 PDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQL 512

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
               L+     D  +  + I  F ++   E A+   ++M      F +  YTI +     
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS 572

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
           D ++  A  +F  + E +      +   L+ G C  G +  A  +F    + G    P V
Sbjct: 573 DCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG--CSPNV 630

Query: 708 CNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREM 761
             Y      + K NK   A+ L  +MK  G   D  LY     L+    NT EM
Sbjct: 631 VTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTM---LIAAFCNTGEM 681



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 240/540 (44%), Gaps = 69/540 (12%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ-------INRA 219
           NI++ + L+  L +  + +    + + + + G  PN  TYTI+++  C+       I RA
Sbjct: 170 NIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRA 229

Query: 220 DEAYRLFLKMKDSGCSPDFVAY-----------------------------------NAL 244
            E   +  K+  SG +P+ V Y                                   NA+
Sbjct: 230 SE---ILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAV 286

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + G C+   +DEA  + +  +  G +P + SYS LIDG  R  R D+A   +++M    I
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P++  Y ++I G  + G+V  A+++  +M+  GI+PD Y Y+ LI GFC  G +D A  
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK 406

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
              E+   +  P+   +  LI G  ++    +A K F  M+K G +P     N ++   C
Sbjct: 407 FWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYC 466

Query: 425 KAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKI 483
           +  +  KA  L  K +               N VH +  S    + + C   +  KA ++
Sbjct: 467 RKPDFNKALALSEKFQ--------------ENGVHFNPYSYNEFIHRICRGSVPEKALQL 512

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L  + +   LPD++ Y++LI+ F K  N   A+ LF ++   G+  +  TY  LIN    
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS 572

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             + + A+R+F  M ++   P    Y SL+   C   + + A +L+ +  R+    +  +
Sbjct: 573 DCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632

Query: 604 MKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIF 658
               I E+L+  +  N    L E   K+ +  + P    YT+ +   C  G++  A  +F
Sbjct: 633 YTCFINEYLKLNK-NNQAHKLYE---KMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 184/383 (48%), Gaps = 5/383 (1%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF--VLISGYYKVGDCEKA 117
           L +  S S +I    K    D   +  +E++  N  ++ DV+   +LI G+ + GD + A
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMK--NSGILPDVYSYSILIDGFCRKGDMDSA 404

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           ++ + +M   +  P  + Y +++   ++ + F  AL  +  M KL   P+ +  + +++ 
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSI 464

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
             +      A+ + ++  + G+  N ++Y   I  +C+ +  ++A +L   M      PD
Sbjct: 465 YCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPD 524

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            V Y+ L++ F K    ++A+ L     K G    + +Y+ LI+      + D AY  ++
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFK 584

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M E ++ PD + Y  ++ G    G++  A  L  +M   G  P+   Y   I  +  L 
Sbjct: 585 GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLN 644

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-CFPSVGMF 416
             +QA  L  ++ +R   P+   +T+LI   C  G ++ A+ LF++M++ G C P+V M+
Sbjct: 645 KNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMY 704

Query: 417 NALIDGLCKAGELEKANLLFYKM 439
             LI+   K  + ++A  L+ +M
Sbjct: 705 TCLINSYIKLNKRDQAEKLYEEM 727


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 237/467 (50%), Gaps = 16/467 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSL 173
           + A+ +F +M      P +   N +L+   + + +   +++   +  K    P++VT S+
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            IN L+  G+  +A  ++ ++ +RG   + FT T ++ GLC   R  EA  L+      G
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            S D V Y  L+NG CK+ +  +A+ LLR  EK G  P L  Y+ ++DGL +     EA 
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEAC 216

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKG 352
               +M  + I  DV  Y  +I G   AG+ + A++LL++M  +  + PD Y +N L+  
Sbjct: 217 GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDA 276

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
            C LG++ +AR++   + KR   P+  +   L+ G C  G + +A+++F++M + G  P+
Sbjct: 277 LCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPN 336

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
           V  ++ LI+G CK   +++A  L  +M                N V D  +   +++   
Sbjct: 337 VISYSTLINGYCKVKMVDEALRLLTEM-------------HQRNLVPDTVTYNCLLDGLS 383

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
            +G +   + ++  +  SG  PD+ITYN L++ + K   ++ AL LF+ +   G+ P+  
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           TY  LI+GL +  R + A  IF  +   GC P+   Y ++M    RR
Sbjct: 444 TYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTY-NIMINGLRR 489



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 217/431 (50%), Gaps = 19/431 (4%)

Query: 4   TLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSF 63
           T+  + + LD+    +P+L  L  F++  T           Q+G  F + A   KR   F
Sbjct: 73  TVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLG--------QMGLAFSVMAKIVKR--GF 122

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFF------VLISGYYKVGDCEKA 117
             +   ++ L+K  G  L  +T + L   + +V     F       LI+G  K+G    A
Sbjct: 123 GVDPFTLTTLMK--GLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDA 180

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           +E   KM++   +P++ +YN V++   ++ L   A  +  EMV      ++ T++ LI+G
Sbjct: 181 IELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHG 240

Query: 178 LSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
              +G+ + A+++L+EM  +  + P+ +T+ I++  LC++    EA  +F  M   G  P
Sbjct: 241 FCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEP 300

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V+ NAL+NG+C    + EA  +     + G +P + SYS LI+G  + K  DEA    
Sbjct: 301 DVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLL 360

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M +  + PD V Y  ++ GLS++G+V     L+  MR  G  PD   YN L+  +   
Sbjct: 361 TEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKR 420

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             LD+A +L   I      PN  T+ ILI G+C+ G +  A+++F  +   GC P++  +
Sbjct: 421 ECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTY 480

Query: 417 NALIDGLCKAG 427
           N +I+GL + G
Sbjct: 481 NIMINGLRREG 491



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 249/570 (43%), Gaps = 90/570 (15%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVI 210
           A++ ++ M+ L+  P+IV+ + L++ + K+      + +   +  +G   P+  T +I I
Sbjct: 39  AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           + L  + +   A+ +  K+   G   D      L+ G C   R  EAL L       GF 
Sbjct: 99  NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGF- 157

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
                             +DE                 V YG +I GL + GK +DA++L
Sbjct: 158 -----------------SFDE-----------------VCYGTLINGLCKMGKTRDAIEL 183

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M + G+ P+   YN ++ G C  GL+ +A  L  E+  +    +  T+  LI G C 
Sbjct: 184 LRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCG 243

Query: 391 NGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
            G    A +L N+M  K    P V  FN L+D LCK G + +A  +F  M + G  P   
Sbjct: 244 AGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEP--- 300

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                      D  S   ++  +C  G + +A ++  ++ E G LP++I+Y++LING+CK
Sbjct: 301 -----------DVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCK 349

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           V  ++ AL+L  E+  + L PD+VTY  L++GL +  R    + +   M  +G  P    
Sbjct: 350 VKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLIT 409

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDF 628
           Y  L+    +R     A +L+                  +  +  G   N          
Sbjct: 410 YNVLLDDYLKRECLDKALALF------------------QHIVDTGISPN---------- 441

Query: 629 KLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV--ECKAIVTPPSCVKLIHGLCKRGYL 686
                 +  Y I + GLC+ G++K A  IF +L    C+  +   +   +I+GL + G L
Sbjct: 442 ------IRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNI--MINGLRREGLL 493

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           D A  + L  + +GF       + L+R+LL
Sbjct: 494 DEAEALLLEMVDDGFPPNAVTFDPLVRALL 523



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 207/493 (41%), Gaps = 51/493 (10%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV-PRLGSYSC 278
           D+A   F +M      P  V+ N LL+   K +     ++L    +  G   P L + S 
Sbjct: 37  DDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSI 96

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
            I+ L    +   A++   K+ +     D      +++GL   G+  +A+ L      +G
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
              D  CY  LI G C +G    A  L  ++ K    PN   + +++ G+C+ G+V +A 
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEAC 216

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            L ++M   G    V  +N+LI G C AG+ + A  L  +M + ++              
Sbjct: 217 GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR------------ 264

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            D  +   +V+  C  G++ +A  +   + + G  PD+++ N+L+NG+C  G ++ A ++
Sbjct: 265 PDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEV 324

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F  +  +G  P+ ++Y TLING  +V   ++A R+  +M Q    P    Y  L+    +
Sbjct: 325 FDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSK 384

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                             SGR       +E     G+  + I                 Y
Sbjct: 385 ------------------SGRVLYEWDLVEAMRASGQAPDLIT----------------Y 410

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF-LYTL 697
            + L    +   + +AL +F  +V+        +   LI GLCK G +  A ++F L ++
Sbjct: 411 NVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470

Query: 698 KNGFILRPRVCNY 710
           K     RP +  Y
Sbjct: 471 KG---CRPNIRTY 480



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 5/291 (1%)

Query: 99  DVFFV--LISGYYKVGDCEKALESFGKM--KEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           DVF    LI G+   G  + A+    +M  KE D +PDVY +N +++   +  +   A  
Sbjct: 230 DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKE-DVRPDVYTFNILVDALCKLGMVAEARN 288

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+  M+K    P++V+ + L+NG    G    A ++ D M +RG LPN  +Y+ +I+G C
Sbjct: 289 VFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYC 348

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           ++   DEA RL  +M      PD V YN LL+G  K  RV     L+ +    G  P L 
Sbjct: 349 KVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLI 408

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ L+D   + +  D+A A ++ + +  I P++  Y ++I GL + G++K A ++   +
Sbjct: 409 TYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLL 468

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
             +G  P+   YN +I G    GLLD+A +L +E+      PN  TF  L+
Sbjct: 469 SVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLV 519



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 133/254 (52%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +L+    K+G   +A   FG M +   +PDV   NA++N    +     A  V+  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+   LPN++++S LING  K    + A+++L EM QR ++P+  TY  ++ GL +  R 
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
              + L   M+ SG +PD + YN LL+ + K   +D+ALAL +     G  P + +Y+ L
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDGL +  R   A   ++ +  +   P++  Y +MI GL   G + +A  LL +M + G 
Sbjct: 449 IDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGF 508

Query: 340 VPDTYCYNALIKGF 353
            P+   ++ L++  
Sbjct: 509 PPNAVTFDPLVRAL 522



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 164/415 (39%), Gaps = 72/415 (17%)

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           R +LP T TF             DDA   F++M      PS+   N L+  +        
Sbjct: 27  RKTLPKTPTF-------------DDAVSTFHRMLHLHPPPSIVSLNKLLSSI-------- 65

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM---VEQYCTAGLIHKAYKILMQLA 488
                  M+    PT+    S   ++   K SL T+   +      G +  A+ ++ ++ 
Sbjct: 66  -------MKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIV 118

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           + G   D  T  +L+ G C  G    AL L+     KG   D V YGTLINGL ++ +  
Sbjct: 119 KRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTR 178

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-I 607
           DA  +  +M + G  P+  +Y  ++   C+    + A  L  + +      D  +  S I
Sbjct: 179 DAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLI 238

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT--IWLIGLCQDGQVKEALNIFSVL---- 661
             F   G+ + A++ L EM  K  D +   YT  I +  LC+ G V EA N+F ++    
Sbjct: 239 HGFCGAGQFQGAVRLLNEMVMK-EDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRG 297

Query: 662 -----VECKAIVTP-----------------------PSCVK---LIHGLCKRGYLDLAM 690
                V C A++                         P+ +    LI+G CK   +D A+
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +     +   +      N LL  L  SK  + ++ + L+  M++ G   D   Y
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGL--SKSGRVLYEWDLVEAMRASGQAPDLITY 410


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 261/577 (45%), Gaps = 70/577 (12%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMK 125
           A +S  +     D   QT       NV ++ ++  F  LI+   K  + + AL  F + K
Sbjct: 163 ACVSQNMFVEAIDFLLQT-----RKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFK 217

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
            F    + Y Y  V+    +K  +   + V+ EM +     +   ++  I GL K+ +++
Sbjct: 218 SFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSD 277

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           +   +L +   R    +K+ YT VI G C   + DEA  +FL+M+  G  PD   Y AL+
Sbjct: 278 LGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALV 337

Query: 246 NGFCKLRRVDEALALLRS-----------------------------------FEKDGFV 270
           +G+C  R  D+ALA+ +S                                   F++ G  
Sbjct: 338 HGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLF 397

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
               +Y+ L D L +  + D+A     ++   +++ D+  Y  +I G    GK  +A  L
Sbjct: 398 IDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSL 457

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
             +M ERG  PD   YN L  GF       +A  L   +  +   PN+ T  I+I G+C 
Sbjct: 458 FKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCS 517

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN-------LLFYKMEIGK 443
            G V++A++ FN ++      SV ++ AL++G C+A  +EK++       LL   +E+  
Sbjct: 518 AGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNM 577

Query: 444 NPT------LFLRLSQGGNR----------VH-----DKASLQTMVEQYCTAGLIHKAYK 482
            P+      +F  L   GN           +H     D  +   M+  YC    + +A++
Sbjct: 578 KPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHE 637

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +   + E G  PD +TY  +ING+CK+  +  A +LFK+++ +G++PD + Y  +I GL 
Sbjct: 638 LFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLL 697

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
                E AF+++ +M   G TP   + + +   + R+
Sbjct: 698 NSGHTEIAFQLYNEMIDMGMTPGATLKRCIQKANKRQ 734



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 152/629 (24%), Positives = 261/629 (41%), Gaps = 73/629 (11%)

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG--------------------- 233
            Q G   N  TYT +I  LC  N   +   LFL + D                       
Sbjct: 87  NQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFEINVLFDSLFEGVND 146

Query: 234 CSPDFVAYNALLNGFCKL----RRVDEALALLRSFEKDGFV-PRLGSYSCLIDGLFRAKR 288
            + D   +NA  NGF K         EA+  L    K+  + P + S++ LI+ L +   
Sbjct: 147 VNEDHYLFNA-FNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVKHDE 205

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A   + +     +  +   Y ++I+ L + G  ++ +++  +M+E G+  D+YCY  
Sbjct: 206 VDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYAT 265

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            I+G C     D   ++  +   R++  + + +T +I G C    +D+A+ +F +MEK G
Sbjct: 266 FIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQG 325

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK----NPTLFLRLSQGGNRVHDKASL 464
             P V ++ AL+ G C +   +KA L  YK  I +    N  +F  +    + +     +
Sbjct: 326 LVPDVYVYCALVHGYCNSRNFDKA-LAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEV 384

Query: 465 QTMVEQYCTAGLI--HKAYKILMQ-LAESGNLPDII----------------TYNSLING 505
             M E++  +GL    KAY IL   L + G + D +                 Y +LING
Sbjct: 385 VDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLING 444

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
           +   G    A  LFKE++ +G +PD V Y  L  G  R   + +A  +   M   G  P+
Sbjct: 445 YFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPN 504

Query: 566 PAVYKSLMTWSCRRRKFSLA--FSLWLQ----------YLRDISGRDDESMKSIEEFLQK 613
              +K ++   C   K   A  F  WL+          Y   ++G  + ++  IE+  + 
Sbjct: 505 STTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAAL--IEKSHEL 562

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
            E    ++ +LEM+ K +      Y+     LC +G ++ A  +F++ +         + 
Sbjct: 563 KEAFILLRTMLEMNMKPSK---VMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTY 619

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
             +I+G CK   L  A ++F    + G  + P    Y +    + K N    A+ L   M
Sbjct: 620 TIMINGYCKTNCLPEAHELFKDMKERG--ITPDAVTYTIMINGYCKMNCLREAHELFKDM 677

Query: 734 KSVGYDLDACLYPKTKSLLPGPWNTREME 762
           K  G   D   Y     ++ G  N+   E
Sbjct: 678 KERGIKPDVIAYT---VIIKGLLNSGHTE 703


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/707 (23%), Positives = 307/707 (43%), Gaps = 21/707 (2%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSGNVSVVSDVF 101
           +P+     F+  A++ R+     +   +  L++ +G      Q  D ++   +      F
Sbjct: 80  DPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
             +       G    A  +   MKE     + Y YN ++    +      A+ VY  M  
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              +P + T+S+L+    K    E  + +L EM  RG+ PN ++YTI I  L Q  R +E
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           AYR+  KM++ GC PD V    L+   C   R+ +A  +    +     P   +Y  L+D
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
               +         +  +  +    +VV Y   +  L + G+V +A+ +  +M+++GI+P
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
             Y YN+LI GF      ++A  L   +      PN +T  + I    ++G    A K +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHD 460
             M+  G  P V   NA++ GL K G L  A  +F++++ +G +P              D
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISP--------------D 485

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M++    A    +A KI  ++ E+   PD++  NSLI+   K G  N A K+F 
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFY 545

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           EL+   L P   TY TL+ GL R  + ++  ++   M  N   P+   Y +++   C+  
Sbjct: 546 ELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNG 605

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
           + + A  +      +    D  S  ++    +++G ++ A     +M  K+     A   
Sbjct: 606 EVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVC 664

Query: 640 IWLIGLCQDGQVKEALN-IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
             L    + G +KEAL+ +   +++  + V   S   L+ G+ KR   + +++       
Sbjct: 665 TILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIAS 724

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +G +L     + ++R   F K  + + A+ L+ + +++G  L    Y
Sbjct: 725 SGLLLDDLFLSPIIRH--FCKHKEALAAHELVKKFENLGVSLKTGSY 769



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 160/636 (25%), Positives = 287/636 (45%), Gaps = 66/636 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF-RKQLFLLALAVYYE 158
           ++F++ SG+ +     +A++ +  M      P V  Y +VL +AF +++     + +  E
Sbjct: 178 IYFLVKSGFDR-----EAMDVYKAMAADGVVPTVRTY-SVLMLAFGKRRDAETVVGLLGE 231

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PN+ ++++ I  L ++G+ E A ++L +M + G  P+  T T++I  LC   R
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291

Query: 219 ADEAYRLFLKMKDSGCSPD-----------------------------------FVAYNA 243
             +A  +F KMK S   PD                                    V+Y A
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            ++  C++ RVDEAL +    ++ G +P+  SY+ LI G  +A R++ A   +  M    
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P+   + + I    ++G+   A+K    M+ +GIVPD    NA++ G    G L  A+
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  E+      P+  T+T++I    +    D+A K+F +M +  C P V   N+LID L
Sbjct: 472 RVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML 531

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            KAG   +A  +FY++ E+   PT                +  T++      G + +  +
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPT--------------DCTYNTLLAGLGREGKVKEVMQ 577

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  +   P+IITYN++++  CK G +N AL +   + + G  PD  +Y T++ GL 
Sbjct: 578 LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLV 637

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDD 601
           +  R ++AF +F QM +    P  A   +++    R      A     +Y L+  S  D 
Sbjct: 638 KEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDR 696

Query: 602 ESMKSI-EEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            S+ S+ E  L++   E +I   + +      L+D  L+P    +   C+  +   A  +
Sbjct: 697 SSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPI---IRHFCKHKEALAAHEL 753

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                     +   S   LI GL     +D+A ++F
Sbjct: 754 VKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 261/581 (44%), Gaps = 50/581 (8%)

Query: 29   LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            ++ T +     K  N     + F    + +      + +++I ML K    +  W+   E
Sbjct: 487  ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546

Query: 89   LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
            L+  N+      +  L++G  + G  ++ ++    M      P++  YN VL+   +   
Sbjct: 547  LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606

Query: 149  FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM---------TQRGI 199
               AL + Y M    C+P++ +++ ++ GL K G+ + A  M  +M         T   I
Sbjct: 607  VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTI 666

Query: 200  LP--------------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            LP                          ++ +   ++ G+ + +  +++      +  SG
Sbjct: 667  LPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSG 726

Query: 234  CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
               D +  + ++  FCK +    A  L++ FE  G   + GSY+ LI GL      D A 
Sbjct: 727  LLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAE 786

Query: 294  AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              + +M     +PD   Y +++  + ++ +++D +K+  +M  +G       YN +I G 
Sbjct: 787  ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 354  CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                +LD+A +L  ++      P   T+  L+ G+ ++G ++DA+ LF++M + GC P+ 
Sbjct: 847  VKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNC 906

Query: 414  GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             ++N L++G   AG+ EK   LF  M E G NP              D  S   +++  C
Sbjct: 907  AIYNILLNGYRIAGDTEKVCELFESMVEQGMNP--------------DIKSYTVVIDTLC 952

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
              G ++       QL + G  PD+ITYN LI+G  K G +  AL L+ +++ KG+ P+  
Sbjct: 953  ADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLY 1012

Query: 533  TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            TY +LI  L +  +  +A +++ ++   G  P+   Y +L+
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 284/632 (44%), Gaps = 49/632 (7%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N +VVS  +   +    +VG  ++AL+ F +MK+    P  Y YN++++   +   F  A
Sbjct: 343 NDNVVS--YTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L ++  M      PN  T  L IN   KSG++  A+K  + M  +GI+P+      V+ G
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L +  R   A R+F ++K  G SPD + Y  ++    K    DEA+ +     ++   P 
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + + + LID L++A R +EA+  + ++ E  +EP    Y  ++ GL   GKVK+ M+LL 
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M      P+   YN ++   C  G ++ A  +   +     +P+  ++  ++ G+ + G
Sbjct: 581 GMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEG 640

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            +D+A  +F +M+K    P       ++    ++G +++A             T+   + 
Sbjct: 641 RLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEA-----------LHTVREYIL 688

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           Q  ++V D++S+ +++E         K+ +    +A SG L D +  + +I  FCK    
Sbjct: 689 QPDSKV-DRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEA 747

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A +L K+ +  G+   + +Y  LI GL   D  + A  +F +M + GC P    Y  +
Sbjct: 748 LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +                     D  G+   SM+ IE+ L+  E         EM  K   
Sbjct: 808 L---------------------DAMGK---SMR-IEDMLKIQE---------EMHNKGYK 833

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
                Y   + GL +   + EA+N++  L+      TP +   L+ GL K G ++ A  +
Sbjct: 834 STYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEAL 893

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
           F   L+ G      + N LL     + D +KV
Sbjct: 894 FDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 166/706 (23%), Positives = 302/706 (42%), Gaps = 61/706 (8%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            +  S +A +  L +    D      DE++   +      +  LISG+ K     +ALE F
Sbjct: 345  NVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELF 404

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
              M      P+ Y +   +N   +    L AL  Y  M     +P++V  + ++ GL+K+
Sbjct: 405  NHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKT 464

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            G+  +A ++  E+   GI P+  TYT++I    + + ADEA ++F +M ++ C+PD +A 
Sbjct: 465  GRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAM 524

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            N+L++   K  R +EA  +    ++    P   +Y+ L+ GL R  +  E       M  
Sbjct: 525  NSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNS 584

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
                P+++ Y  ++  L + G+V  A+ +L  M   G +PD   YN ++ G    G LD+
Sbjct: 585  NSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDE 644

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK------------------ 403
            A  +  ++ K+   P+  T   ++    R+G++ +A     +                  
Sbjct: 645  AFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLM 703

Query: 404  ------------MEKAGCFPSVGM------FNALIDGLCKAGELEKANLLFYKMEIGKNP 445
                        +E A    S G+       + +I   CK  E   A+ L  K E     
Sbjct: 704  EGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFE----- 758

Query: 446  TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
             L + L  G        S   ++       LI  A ++  ++   G  PD  TY+ +++ 
Sbjct: 759  NLGVSLKTG--------SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810

Query: 506  FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
              K   I   LK+ +E+  KG +   VTY T+I+GL +    ++A  ++ Q+   G +P+
Sbjct: 811  MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870

Query: 566  PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGL 623
            P  Y  L+    +      A +L+ + L +     + ++ +I    +   G+ E   +  
Sbjct: 871  PCTYGPLLDGLLKDGNIEDAEALFDEML-ECGCEPNCAIYNILLNGYRIAGDTEKVCELF 929

Query: 624  LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGL 680
              M  +  +  +  YT+ +  LC DG++ + L+ F  L +   +   P  +    LIHGL
Sbjct: 930  ESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTD---MGLEPDLITYNLLIHGL 986

Query: 681  CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
             K G L+ A+ ++    K G  + P +  Y    L   K  K   A
Sbjct: 987  GKSGRLEEALSLYNDMEKKG--IAPNLYTYNSLILYLGKAGKAAEA 1030



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 164/326 (50%)

Query: 94   VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            VS+ +  +  LI G       + A E F +MK   C PD + Y+ +L+   +       L
Sbjct: 762  VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821

Query: 154  AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             +  EM         VT++ +I+GL KS   + AI +  ++   G  P   TY  ++ GL
Sbjct: 822  KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881

Query: 214  CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             +    ++A  LF +M + GC P+   YN LLNG+      ++   L  S  + G  P +
Sbjct: 882  LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             SY+ +ID L    R ++  ++++++ +  +EPD++ Y ++I GL ++G++++A+ L +D
Sbjct: 942  KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            M ++GI P+ Y YN+LI      G   +A  +  E+  +   PN  T+  LI G   +G 
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNAL 419
             ++A   + +M   GC P+   +  L
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 175/370 (47%), Gaps = 15/370 (4%)

Query: 171  FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
             S +I    K  +   A +++ +    G+     +Y  +I GL   +  D A  LF +MK
Sbjct: 734  LSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMK 793

Query: 231  DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
              GC PD   Y+ +L+   K  R+++ L +       G+     +Y+ +I GL ++K  D
Sbjct: 794  RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLD 853

Query: 291  EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            EA   Y ++  E   P    YG ++ GL + G ++DA  L  +M E G  P+   YN L+
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913

Query: 351  KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             G+   G  ++   L   + ++   P+  ++T++I  +C +G ++D    F ++   G  
Sbjct: 914  NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973

Query: 411  PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P +  +N LI GL K+G LE+A  L+  ME  G  P L+              +  +++ 
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLY--------------TYNSLIL 1019

Query: 470  QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                AG   +A K+  +L   G  P++ TYN+LI G+   G+   A   +  + + G RP
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079

Query: 530  DSVTYGTLIN 539
            +S TY  L N
Sbjct: 1080 NSSTYMQLPN 1089



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 196/407 (48%), Gaps = 7/407 (1%)

Query: 49   RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV-LISG 107
            R +I     K  RS  S  +++  +LK +G +   +  + + S  + ++ D+F   +I  
Sbjct: 684  REYILQPDSKVDRS--SVHSLMEGILKRDGTEKSIEFAENIASSGL-LLDDLFLSPIIRH 740

Query: 108  YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
            + K  +   A E   K +          YNA++     + L  +A  ++ EM +L C P+
Sbjct: 741  FCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPD 800

Query: 168  IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
              T+ L+++ + KS + E  +K+ +EM  +G      TY  +ISGL +    DEA  L+ 
Sbjct: 801  EFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYY 860

Query: 228  KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAK 287
            ++   G SP    Y  LL+G  K   +++A AL     + G  P    Y+ L++G   A 
Sbjct: 861  QLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAG 920

Query: 288  RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
              ++    +  M E+ + PD+  Y V+I  L   G++ D +     + + G+ PD   YN
Sbjct: 921  DTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYN 980

Query: 348  ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             LI G    G L++A SL  ++ K+   PN +T+  LI  + + G   +A K++ ++   
Sbjct: 981  LLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK 1040

Query: 408  GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIG---KNPTLFLRL 451
            G  P+V  +NALI G   +G  E A   + +M +G    N + +++L
Sbjct: 1041 GWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 35/254 (13%)

Query: 28   FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
            +++  T+ S ++K+K        +          +  +   ++  LLK    +      D
Sbjct: 836  YVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFD 895

Query: 88   ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            E+          ++ +L++GY   GD EK  E F  M E    PD+  Y  V++      
Sbjct: 896  EMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADG 955

Query: 148  LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN----- 202
                 L+ + ++  +   P+++T++LLI+GL KSG+ E A+ + ++M ++GI PN     
Sbjct: 956  RLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYN 1015

Query: 203  ------------------------------KFTYTIVISGLCQINRADEAYRLFLKMKDS 232
                                           FTY  +I G       + A+  + +M   
Sbjct: 1016 SLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVG 1075

Query: 233  GCSPDFVAYNALLN 246
            GC P+   Y  L N
Sbjct: 1076 GCRPNSSTYMQLPN 1089


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/669 (23%), Positives = 292/669 (43%), Gaps = 72/669 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +++  Y + GD  +A E+F +M+     P   IY ++++     +    AL+   +M 
Sbjct: 313 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMK 372

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+++ G SK+G  E A    DE  +     N   Y  +I   CQ    +
Sbjct: 373 EEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 432

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M++ G       Y+ +++G+  +    + L + +  ++ GF P + +Y CLI
Sbjct: 433 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLI 492

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    R M EE ++ ++  Y +MI G  +     +A  +  DM + G+ 
Sbjct: 493 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 552

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I  FC +G +D+A     E+ K    P T TF  +I G  ++G +  + ++
Sbjct: 553 PDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEV 612

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNR 457
           F+ M + GC P+V  FNALI+GL +  ++EKA  +  +M    +  N   + ++ QG   
Sbjct: 613 FDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG--- 669

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                        Y + G   KA++   +L   G   DI TY +L+   CK G +  AL 
Sbjct: 670 -------------YASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALA 716

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           + KE+  + +  +S  Y  LI+G  R     +A  +  QM + G  P    Y S ++ +C
Sbjct: 717 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS-AC 775

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            +                                  G++  A Q + EM+       +  
Sbjct: 776 SK---------------------------------AGDMNRATQTIEEMEALGVKPNIKT 802

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAI-VTPPSCVK--LIHGLCKRGYLDLAMDVFL 694
           YT  + G  +    ++AL+ +    E KA+ + P   V   L+  L  R  +    + ++
Sbjct: 803 YTTLIKGWARASLPEKALSCYE---EMKAVGLKPDKAVYHCLLTSLLSRASI---AEAYI 856

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           Y+   G +    +C  ++ + L       VH    LC+++  G +L   L    +   P 
Sbjct: 857 YS---GVMT---ICKEMVEAGLIVDMGTAVHWSRCLCKIEGSGGELTETL----QKTFPP 906

Query: 755 PWNTREMEN 763
            W++    +
Sbjct: 907 DWSSHHHHH 915



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 198/450 (44%), Gaps = 21/450 (4%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +     ++  ++ GY  V D +K L  F ++KE    P V  Y  ++N+  +  
Sbjct: 440 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVG 499

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M +     N+ T+S++ING  K      A  + ++M + G+ P+   Y 
Sbjct: 500 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 559

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+  C +   D A +   +M+     P    +  ++NGF K   +  +L +     + 
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G VP + +++ LI+GL   ++ ++A     +M    +  +   Y  +++G +  G    A
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 679

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + ++  G+  D + Y AL+K  C  G +  A ++  E+  R+   N+  + ILI G
Sbjct: 680 FEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 739

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPT 446
             R G V +A  L  +M+K G  P +  + + I    KAG++ +A     +ME +G  P 
Sbjct: 740 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 799

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T+++ +  A L  KA     ++   G  PD   Y+ L+   
Sbjct: 800 I--------------KTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSL 845

Query: 507 CKVGNI------NGALKLFKELQLKGLRPD 530
               +I      +G + + KE+   GL  D
Sbjct: 846 LSRASIAEAYIYSGVMTICKEMVEAGLIVD 875



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 161/376 (42%), Gaps = 55/376 (14%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I+        D   QT+ E++       +  F  +I+G+ K GD  ++LE F  M+   
Sbjct: 561 IIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCG 620

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P V+ +NA                                   LINGL +  + E A+
Sbjct: 621 CVPTVHTFNA-----------------------------------LINGLVEKRQMEKAV 645

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++LDEMT  G+  N+ TYT ++ G   +    +A+  F ++++ G   D   Y ALL   
Sbjct: 646 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKAC 705

Query: 249 CKLRRVDEALALL-----RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           CK  R+  ALA+      R+  ++ FV     Y+ LIDG  R     EA    ++M +E 
Sbjct: 706 CKSGRMQSALAVTKEMSARNIPRNSFV-----YNILIDGWARRGDVWEAADLIQQMKKEG 760

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++PD+  Y   I   S+AG +  A + + +M   G+ P+   Y  LIKG+    L ++A 
Sbjct: 761 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 820

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA------QKLFNKMEKAGCFPSVGMFN 417
           S   E+      P+   +  L+  +     + +A        +  +M +AG    +G   
Sbjct: 821 SCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAV 880

Query: 418 ALIDGLCK----AGEL 429
                LCK     GEL
Sbjct: 881 HWSRCLCKIEGSGGEL 896



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 106/229 (46%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A+I+ L++    +   + LDE+    VS     +  ++ GY  VGD  KA E F +++ 
Sbjct: 629 NALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 688

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              + D++ Y A+L    +      ALAV  EM   N   N   +++LI+G ++ G    
Sbjct: 689 EGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 748

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  ++ +M + G+ P+  TYT  IS   +    + A +   +M+  G  P+   Y  L+ 
Sbjct: 749 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 808

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           G+ +    ++AL+     +  G  P    Y CL+  L       EAY +
Sbjct: 809 GWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIY 857


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 208/443 (46%), Gaps = 19/443 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L  GY + G    A    G M     QP+ Y YN +++    +     AL+V  +M
Sbjct: 137 AYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDM 193

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +   C P++VT+++L+    K      A++++D M   G  PN  TY +++ G+C     
Sbjct: 194 LCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDV 253

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L   +   GC P  V YN +L G C   R  +A  L+    ++   P   +++ +
Sbjct: 254 DDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVV 313

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I  L R     +A     KM +     ++V Y  +I GL E   V  AM LLS M+  G 
Sbjct: 314 IYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD   YN L+KG C       A  L   + +   LP+  TF  LI  +C+ G++ DA +
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F +M   GC P+   ++ +I GL KA +L++A  LF +M   G NP          +++
Sbjct: 434 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP----------DKI 483

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           +     Q + E       I +A + + +L +SG  P  + YN+++ G C+ G    A+ +
Sbjct: 484 Y-----QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDI 538

Query: 519 FKELQLKGLRPDSVTYGTLINGL 541
              +   G  PD +TY  LI GL
Sbjct: 539 MAYMVSSGCMPDDLTYVILIEGL 561



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 247/525 (47%), Gaps = 67/525 (12%)

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           +S L      D A RL   ++ S   PD    N L+   C+  R D+A  ++ +    G 
Sbjct: 78  LSALVHRGDLDAALRL---VESSPRPPDAALANRLVRDLCRRGRPDDAERVVGAC---GP 131

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
              + +Y  L DG  RA R  +A      M    ++P+   Y  +I  L E G+V+DA+ 
Sbjct: 132 AATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALS 188

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           +L DM  RG  PD   YN L++  C      QA  L   +      PN  T+ +L+ GMC
Sbjct: 189 VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMC 248

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
             G VDDA +L   +   GC PS   +N ++ GLC A     A+ L  +M         L
Sbjct: 249 GEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM---------L 299

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R     N   ++A+   ++   C  GL+ +A ++L ++++ G   +I+TYN++ING C+ 
Sbjct: 300 R----ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQ 355

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGL----QRVDREE----------------- 548
            N++GA+ L  +++  G +PD VTY TL+ GL    Q VD EE                 
Sbjct: 356 RNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTF 415

Query: 549 --------------DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
                         DA  +F QMP  GCTP+   Y ++++   +  K   A  L+ + + 
Sbjct: 416 NTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE-MG 474

Query: 595 DISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYTIW----LIGLCQDG 649
                 D+  + + E L   + +E AIQ +     KL D  ++P+T+     L+GLC++G
Sbjct: 475 HKGFNPDKIYQLLAECLNDDDTIEEAIQTV----RKLQDSGISPHTVLYNAILLGLCRNG 530

Query: 650 QVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           + + A++I + +V    +    + V LI GL   GYL+ A ++ +
Sbjct: 531 KTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLI 575



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 190/383 (49%), Gaps = 5/383 (1%)

Query: 61  RSFASNSAVISMLL----KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R  A +    ++LL    K  G+    + +D +R+   +  +  + VL+ G    GD + 
Sbjct: 196 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDD 255

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           ALE    +    C+P    YN VL      + +  A  +  EM++ NC PN  TF+++I 
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L + G  + AI++L++M++ G   N  TY  +I+GLC+    D A  L  KMK  GC P
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D V YN LL G C   +  +A  L+ +  ++G +P   +++ LI  L +     +A   +
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           ++M ++   P+ + Y  +I GL++A K+  A++L ++M  +G  PD   Y  L +   D 
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDD 494

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
             +++A     ++      P+T  +  ++ G+CRNG  + A  +   M  +GC P    +
Sbjct: 495 DTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTY 554

Query: 417 NALIDGLCKAGELEKANLLFYKM 439
             LI+GL   G L +A  L  K+
Sbjct: 555 VILIEGLAYEGYLNEARELLIKL 577



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 152/300 (50%), Gaps = 5/300 (1%)

Query: 83  WQTLDELRSG----NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           W   DEL +     N       F V+I    + G  ++A++   KM +  C  ++  YNA
Sbjct: 288 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 347

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N    ++    A+ +  +M    C P+IVT++ L+ GL  + +   A +++D MTQ G
Sbjct: 348 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNG 407

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
            LP+  T+  +I  LCQ     +A  +F +M D GC+P+ + Y+ +++G  K  ++D+AL
Sbjct: 408 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 467

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L       GF P    Y  L + L      +EA    RK+ +  I P  VLY  ++ GL
Sbjct: 468 ELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGL 526

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
              GK + A+ +++ M   G +PD   Y  LI+G    G L++AR L +++  RD L N+
Sbjct: 527 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNS 586


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 237/481 (49%), Gaps = 35/481 (7%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAVYYEMVKLNCLPNIVTFSL 173
           + A+ SF +M++    P +  +N +L    + K  +   L++  +M      P++ T S+
Sbjct: 48  DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSI 107

Query: 174 LIN---------------------GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           LIN                     GL  +GK   A+   D +   G   N  TY I+I+G
Sbjct: 108 LINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILING 167

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC++ +   A ++  +++    + + V Y+ +++G CK + V +A  L          P 
Sbjct: 168 LCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPT 227

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + ++S LI G     ++ +A+  + +M  + I PD   + +++  L + GK+K+A  +++
Sbjct: 228 VVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIA 287

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            M + G+ P    YN L+ G+C +  + +A+ +   I +    PN+ ++ I+I G C+  
Sbjct: 288 VMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIK 347

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
           MVD+A  LF++M   G  P    +N+LIDGLCKAG +  A  L  +M     P       
Sbjct: 348 MVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPA------ 401

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  D  +  ++++ +C    + KA  ++ ++ E G  P++ TYN LI+G CK G +
Sbjct: 402 -------DIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  +F++L +KG   ++ TY  +INGL +    ++A  +  +M  NG  P    Y+++
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514

Query: 573 M 573
           +
Sbjct: 515 I 515



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 263/562 (46%), Gaps = 62/562 (11%)

Query: 38  IMKTKNPQVGFRFF---IWAAKRKRLRSFASNSAVISMLLKPNGFD-----LYWQTLDEL 89
           + +T++PQ+ F      I    R+R    +S   + ++L  PNGF      L +  + ++
Sbjct: 1   MTRTQSPQIQFNHHPPTINKCNRRRSPMPSSAEPLKTVLSIPNGFVVDNAVLSFNRMRQI 60

Query: 90  R-SGNVSVVSDVFFVLI---SGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           R + ++   + +   LI   + Y  V      +ES G       +PD++  + ++N    
Sbjct: 61  RQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKG------VKPDLFTLSILINCYCH 114

Query: 146 KQLFLLALAVYYEMVKLN-CLP--------------------NIVTFSLLINGLSKSGKT 184
                 A +V+ +++K+  CL                     N VT+ +LINGL K G+T
Sbjct: 115 LGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQT 174

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
             A+++L ++  + +  N   Y+ +I GLC+     +AY L+ +M      P  V +++L
Sbjct: 175 RAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSL 234

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           + GFC + +  +A  L          P   +++ L+D L +  +  EA      M +E +
Sbjct: 235 IYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGV 294

Query: 305 EPDVVLYGVMIRG---LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           EP VV Y  ++ G   ++E GK K  + ++S MR   + P++  YN +I GFC + ++D+
Sbjct: 295 EPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR---VAPNSRSYNIMINGFCKIKMVDE 351

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS-VGMFNALI 420
           A  L  E+  R   P+  T+  LI G+C+ G +  A +L ++M    C P+ +  +N+LI
Sbjct: 352 ALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN-NCIPADIVTYNSLI 410

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           D  CK   ++KA  L  K+ E G  P +               +   +++  C  G +  
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNM--------------CTYNILIDGLCKGGQLKN 456

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  +   L   G   +  TYN +ING CK G  + A  L  +++  G+ PD+VTY T+I 
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQ 516

Query: 540 GLQRVDREEDAFRIFGQMPQNG 561
            L   D  E A ++  +M   G
Sbjct: 517 ALFHKDENEKAQKLLREMVIKG 538



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 242/537 (45%), Gaps = 67/537 (12%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQI-NRADEAYRLFLKMKDSGCSPDFVAYNALL 245
           A+   + M Q    P+   +  +++ L +  N       L  +M+  G  PD    + L+
Sbjct: 50  AVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILI 109

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           N +C L ++  A ++     K G         CL        + +EA  ++  +      
Sbjct: 110 NCYCHLGQMTFAFSVFAKILKMGL--------CL------NGKVNEALLFHDHVLALGFH 155

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
            + V YG++I GL + G+ + A+++L  +  + +  +   Y+ +I G C   L+  A  L
Sbjct: 156 LNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGL 215

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+  +   P   TF+ LI G C  G   DA +LFN+M      P    FN L+D LCK
Sbjct: 216 YSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK 275

Query: 426 AGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G++++A N++   M+ G  PT+               +  T+++ YC    + KA  +L
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTV--------------VTYNTLMDGYCLVNEVGKAKHVL 321

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             ++     P+  +YN +INGFCK+  ++ AL LF E+  +G+ P  VTY +LI+GL + 
Sbjct: 322 SIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKA 381

Query: 545 DREEDAFRIFGQMPQNGCTPSPAV-YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
            R   A+ +  +M  N C P+  V Y SL+   C+ +    A +L               
Sbjct: 382 GRIPYAWELVDEM-HNNCIPADIVTYNSLIDVFCKNQHVDKAIAL--------------- 425

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
           +K I+        E+ IQ             +  Y I + GLC+ GQ+K A ++F  L+ 
Sbjct: 426 VKKIK--------EHGIQP-----------NMCTYNILIDGLCKGGQLKNAQDVFQDLLI 466

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKD 720
               V   +   +I+GLCK G  D A +V L  +++  I+   V    +   LF KD
Sbjct: 467 KGYNVNAWTYNIMINGLCKEGLFDEA-EVLLSKMEDNGIIPDAVTYETIIQALFHKD 522



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 125/531 (23%), Positives = 213/531 (40%), Gaps = 70/531 (13%)

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR-RVDEALALLRSFEKDGFVPRLGSYS 277
            D A   F +M+    +P  V +N +L    K +      L+L    E  G  P L + S
Sbjct: 47  VDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLS 106

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI+      +   A++ + K+ +               GL   GKV +A+     +   
Sbjct: 107 ILINCYCHLGQMTFAFSVFAKILK--------------MGLCLNGKVNEALLFHDHVLAL 152

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G   +   Y  LI G C +G    A  +  +I  +    N   ++ +I G+C++ +V DA
Sbjct: 153 GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDA 212

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGN 456
             L+++M      P+V  F++LI G C  G+ + A  LF +M +   NP           
Sbjct: 213 YGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINP----------- 261

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D  +   +V+  C  G I +A  ++  + + G  P ++TYN+L++G+C V  +  A 
Sbjct: 262 ---DAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            +   +    + P+S +Y  +ING  ++   ++A  +F +M   G  P    Y SL+   
Sbjct: 319 HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGL 378

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           C+  +   A+ L                                  + EM        + 
Sbjct: 379 CKAGRIPYAWEL----------------------------------VDEMHNNCIPADIV 404

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVFL 694
            Y   +   C++  V +A+ +   + E    + P  C    LI GLCK G L  A DVF 
Sbjct: 405 TYNSLIDVFCKNQHVDKAIALVKKIKEHG--IQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             L  G+ +     N ++  L   K+     A  LL +M+  G   DA  Y
Sbjct: 463 DLLIKGYNVNAWTYNIMINGL--CKEGLFDEAEVLLSKMEDNGIIPDAVTY 511



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  L+ GY  V +  KA      +      P+   YN ++N   + ++   AL +++EM
Sbjct: 300 TYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEM 359

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P+ VT++ LI+GL K+G+   A +++DEM    I  +  TY  +I   C+    
Sbjct: 360 CCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHV 419

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D+A  L  K+K+ G  P+   YN L++G CK  ++  A  + +     G+     +Y+ +
Sbjct: 420 DKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+GL +   +DEA     KM +  I PD V Y  +I+ L    + + A KLL +M  +G+
Sbjct: 480 INGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539

Query: 340 V 340
           V
Sbjct: 540 V 540



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 136/334 (40%), Gaps = 71/334 (21%)

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           +R  +P++      +  +    +VD+A   FN+M +    PS+  FN ++  L K     
Sbjct: 24  RRSPMPSSAEPLKTVLSIPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHY 83

Query: 431 KANL-LFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL---- 484
              L L  +ME  G  P LF              +L  ++  YC  G +  A+ +     
Sbjct: 84  PTVLSLSTQMESKGVKPDLF--------------TLSILINCYCHLGQMTFAFSVFAKIL 129

Query: 485 -MQLAESGNLPDI----------------ITYNSLINGFCKVGNINGALKLFKELQLKGL 527
            M L  +G + +                 +TY  LING CK+G    AL++ ++++ K +
Sbjct: 130 KMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLV 189

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
             + V Y T+I+GL +     DA+ ++ +M      P+   + SL+   C   KF  AF 
Sbjct: 190 NTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFR 249

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L+          ++  MK+I                              + I +  LC+
Sbjct: 250 LF----------NEMVMKNINP------------------------DAYTFNILVDALCK 275

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
           +G++KEA N+ +V+++     T  +   L+ G C
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYC 309


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 236/477 (49%), Gaps = 32/477 (6%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E   + L+ MT +G  P+    T +I   C+I R   A ++   +++SG   D
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
             +YN L++G+CK   ++EAL   R  ++ G  P   +Y  ++  L    +  +A     
Sbjct: 149 VTSYNVLISGYCKSGEIEEAL---RVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + K  PDVV   V+I    +   V  AMKL ++MR +G  PD   YN LIKGFC  G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A     ++      P+  +  +++  +C  G   DA KL   M + GC PSV  FN
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFN 325

Query: 418 ALIDGLCKAGELEKA-NLLFYKMEIGKNPTL--FLRLSQG--GNRVHDKA--SLQTMVEQ 470
            LI+ LC+ G L KA N+L    + G  P    F  L QG    +  D+A   L+ MV +
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 471 ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                           C  G +  A  IL QL+  G  P +I+YN++I+G  KVG    A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           ++L +E+  KGL+PD +T  +++ GL R  +  +A + F  + +    P+  +Y S++T 
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
            C+ ++ SLA    + +L D+  +  +  ++    L KG      +GL E   KL++
Sbjct: 506 LCKSQQTSLA----IDFLADMVAKGCKPTEATYTTLIKGIT---YEGLAEDASKLSN 555



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 222/472 (47%), Gaps = 53/472 (11%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI  + K+G  + A +  G ++E     DV  YN +++   +      AL V   + ++
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV---LDRM 175

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              PN  T+  ++  L   GK + A+++L    Q    P+  T T++I   C+ +   +A
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +LF +M++ GC PD V YN L+ GFCK  R+DEA+          F+ +L SY C    
Sbjct: 236 MKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIR---------FLKKLPSYGC---- 282

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                                 +PDV+ + +++R L   G+  DAMKLL+ M  +G +P 
Sbjct: 283 ----------------------QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPS 320

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +N LI   C  GLL +A ++   + K    PN+ +F  LI G C    +D A +   
Sbjct: 321 VVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLE 380

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
            M   GC+P +  +N L+  LCK G+++ A ++  ++   G +P+L              
Sbjct: 381 IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI------------- 427

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            S  T+++     G    A ++L ++   G  PD+IT  S++ G  + G +  A+K F  
Sbjct: 428 -SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHY 486

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           L+   +RP++  Y ++I GL +  +   A      M   GC P+ A Y +L+
Sbjct: 487 LKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 171/342 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I    K +G     +  +E+R+         + VLI G+ K G  ++A+    K+  
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS 279

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           + CQPDV  +N +L        ++ A+ +   M++  CLP++VTF++LIN L + G    
Sbjct: 280 YGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGK 339

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L+ M + G  PN  ++  +I G C     D A      M   GC PD V YN LL 
Sbjct: 340 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLT 399

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
             CK  +VD+A+ +L      G  P L SY+ +IDGL +  + + A     +M  + ++P
Sbjct: 400 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D++    ++ GLS  GKV++AMK    ++   I P+ + YN++I G C       A    
Sbjct: 460 DLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFL 519

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            ++  +   P   T+T LI G+   G+ +DA KL N++   G
Sbjct: 520 ADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRG 561



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 208/481 (43%), Gaps = 53/481 (11%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           G RF  +   + +     + +A+I    K        Q +  L      +    + VLIS
Sbjct: 98  GSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLIS 157

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
           GY K G+ E+AL    +M      P+   Y+AVL     +     A+ V    ++  C P
Sbjct: 158 GYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYP 214

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++VT ++LI+   K      A+K+ +EM  +G  P+  TY ++I G C+  R DEA R  
Sbjct: 215 DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFL 274

Query: 227 LKMKDSGCSPDFVAYNALLNGFCK--------------LRR------------------- 253
            K+   GC PD +++N +L   C               LR+                   
Sbjct: 275 KKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQK 334

Query: 254 --VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
             + +AL +L    K G  P   S++ LI G    K  D A  +   M      PD+V Y
Sbjct: 335 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWK 371
            +++  L + GKV DA+ +LS +  +G  P    YN +I G   +G  + A  L  E+  
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 454

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
           +   P+  T T ++ G+ R G V +A K F+ +++    P+  ++N++I GLCK+ +   
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSL 514

Query: 432 A-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A + L   +  G  PT              +A+  T+++     GL   A K+  +L   
Sbjct: 515 AIDFLADMVAKGCKPT--------------EATYTTLIKGITYEGLAEDASKLSNELYSR 560

Query: 491 G 491
           G
Sbjct: 561 G 561



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 211/497 (42%), Gaps = 100/497 (20%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +E  R    M + G SPD +A  AL+  FCK+ R   A  ++   E+ G V         
Sbjct: 96  EEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVI-------- 147

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
                                      DV  Y V+I G  ++G++++A+++L  M   G+
Sbjct: 148 ---------------------------DVTSYNVLISGYCKSGEIEEALRVLDRM---GV 177

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+   Y+A++   CD G L QA  +     +    P+  T T+LI   C+   V  A K
Sbjct: 178 SPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK 237

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNP-----TLFLR-LS 452
           LFN+M   GC P V  +N LI G CK G L++A     K+   G  P      + LR L 
Sbjct: 238 LFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLC 297

Query: 453 QGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKILMQLAESGNLPDII 497
            GG  +     L TM+ +                C  GL+ KA  +L  + + G+ P+  
Sbjct: 298 SGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 357

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           ++N LI GFC    I+ A++  + +  +G  PD VTY  L+  L +  + +DA  I  Q+
Sbjct: 358 SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 417

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
              GC+PS   Y ++                                  I+  L+ G+ E
Sbjct: 418 SSKGCSPSLISYNTV----------------------------------IDGLLKVGKAE 443

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
            A++ L EM +K     L   T  + GL ++G+V+EA+  F  L   K     P+     
Sbjct: 444 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL---KRFAIRPNAFIYN 500

Query: 675 KLIHGLCKRGYLDLAMD 691
            +I GLCK     LA+D
Sbjct: 501 SIITGLCKSQQTSLAID 517



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 183/381 (48%), Gaps = 19/381 (4%)

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +R L   G++++  + L  M  +G  PD     ALI+ FC +G    A  +   + +  +
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
           + +  ++ +LI G C++G +++A ++ ++M   G  P+   ++A++  LC  G+L++A  
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
           +L  +++    P              D  +   +++  C    + +A K+  ++   G  
Sbjct: 203 VLGRQLQSKCYP--------------DVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCK 248

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD++TYN LI GFCK G ++ A++  K+L   G +PD +++  ++  L    R  DA ++
Sbjct: 249 PDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKL 308

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQ 612
              M + GC PS   +  L+ + C++     A ++     +     +  S    I+ F  
Sbjct: 309 LATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCN 368

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
              ++ AI+ L  M  +     +  Y I L  LC+DG+V +A+ I S L       +  S
Sbjct: 369 GKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLIS 428

Query: 673 CVKLIHGLCKRGYLDLAMDVF 693
              +I GL K G  +LA+++ 
Sbjct: 429 YNTVIDGLLKVGKAELAVELL 449



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 21/300 (7%)

Query: 423 LCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           L + GELE+ +  L Y    GK+P              D  +   ++ ++C  G    A 
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSP--------------DVIACTALIREFCKIGRTKNAS 134

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +I+  L ESG + D+ +YN LI+G+CK G I  AL++   +   G+ P++ TY  ++  L
Sbjct: 135 QIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSL 191

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
               + + A ++ G+  Q+ C P       L+  +C+      A  L+ + +R+   + D
Sbjct: 192 CDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNE-MRNKGCKPD 250

Query: 602 ESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
               +  I+ F + G ++ AI+ L ++        +  + + L  LC  G+  +A+ + +
Sbjct: 251 VVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLA 310

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
            ++    + +  +   LI+ LC++G L  A++V     K+G     R  N L++     K
Sbjct: 311 TMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGK 370



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 75/173 (43%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L++   K G  + A+    ++    C P +  YN V++   +     LA+ +  EM
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P+++T + ++ GLS+ GK   A+K    + +  I PN F Y  +I+GLC+  + 
Sbjct: 453 CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
             A      M   GC P    Y  L+ G       ++A  L       G V R
Sbjct: 513 SLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/232 (21%), Positives = 84/232 (36%), Gaps = 39/232 (16%)

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G +    +  + +  KG  PD +    LI    ++ R ++A +I G + ++G       Y
Sbjct: 93  GELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSY 152

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L++  C+                                   GE+E A++ L  M   
Sbjct: 153 NVLISGYCK----------------------------------SGEIEEALRVLDRMGVS 178

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            N    A Y   L  LC  G++K+A+ +    ++ K      +C  LI   CK   +  A
Sbjct: 179 PN---AATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
           M +F      G   +P V  Y +    F K  +   A   L ++ S G   D
Sbjct: 236 MKLFNEMRNKG--CKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 257/544 (47%), Gaps = 31/544 (5%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
           P      F  +A +    +  S S ++ +L+  N F      L +L SG +S  S     
Sbjct: 6   PLKALSLFTSSALQGXQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSS 65

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L   ++++   +  L+SF           V I+ A++N   R QL   AL    +M+   
Sbjct: 66  L---FHEL--TQPHLDSF--------PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRG 112

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            +P   TF+ L+  L KS   E A ++ +E T+  +  + +++ I+I G C++   D+ +
Sbjct: 113 LVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGF 171

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  +M++ G SP+ V Y  L++G CK   ++    L     +   V    +Y+ LI+G 
Sbjct: 172 EVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGF 231

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F+     +    Y KM    I P+V  Y  MI      GK+ +A +L  +MRERG+  + 
Sbjct: 232 FKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNV 291

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFN 402
             YN LI G C    + +A  L   + KRD L PN  ++  LI G C  G +D A  LFN
Sbjct: 292 VTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFN 350

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDK 461
           +M+ +G  PS+  +N LI G  +A        +  +ME  G +P+              K
Sbjct: 351 QMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS--------------K 396

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +++    +  I KA++I   + ++G + DI  Y  LI+G C VG++  A KLFK 
Sbjct: 397 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           L    L+P+ V Y T+I G  +      A R+  +M +NG  P+ A Y S +   C+  K
Sbjct: 457 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516

Query: 582 FSLA 585
           ++ A
Sbjct: 517 WTEA 520



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 198/412 (48%), Gaps = 37/412 (8%)

Query: 72  MLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           +L+K N F+  W+  +E + GNV +    F ++I G  +VG  +K  E  G+M+E    P
Sbjct: 126 LLIKSNFFEKAWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSP 184

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK----------- 180
           +V +Y  +++   +         ++Y+M +L+ + N  T+++LING  K           
Sbjct: 185 NVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELY 244

Query: 181 ------------------------SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
                                    GK   A ++ DEM +RG+  N  TY  +I GLCQ 
Sbjct: 245 EKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQE 304

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R  EA RL  +MK  G SP+ ++YN L++G+C +  +D+A +L    +  G  P L +Y
Sbjct: 305 RRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATY 364

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI G   AK         R+M    + P  V Y +++  L  +  ++ A ++ S M +
Sbjct: 365 NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEK 424

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+V D Y Y  LI G C +G + +A  L   + +    PN   +  +I G C+ G    
Sbjct: 425 AGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYR 484

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           A +L  +M + G  P+V  +N+ I  LCK  +  +A +L   M E+G  P++
Sbjct: 485 ALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSI 536



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 14/455 (3%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           E+AL    +M      P    +N +L +  +   F  A  V+ E  K N   ++ +F ++
Sbjct: 99  EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIM 157

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I G  + G  +   ++L +M + G+ PN   YT +I G C+    +   +LF KM +   
Sbjct: 158 IKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDV 217

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             +   Y  L+NGF K+    + + L    +  G VP + +Y+ +I       + + A+ 
Sbjct: 218 VANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFE 277

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M E  +  +VV Y  +I GL +  +V +A +L+  M+  G+ P+   YN LI G+C
Sbjct: 278 LFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYC 337

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
            +G LD+A SL  ++      P+  T+ ILI G            +  +ME  G  PS  
Sbjct: 338 SIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKV 397

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L+D L ++  +EKA  ++  ME                 V D      ++   C  
Sbjct: 398 TYTILMDALVRSDNIEKAFQIYSSME-------------KAGLVADIYIYGVLIHGLCVV 444

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K+   L E    P+ + YN++I G+CK G+   AL+L KE+   G+ P+  +Y
Sbjct: 445 GDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASY 504

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            + I  L + ++  +A  +   M + G  PS +++
Sbjct: 505 NSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIW 539



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 231/532 (43%), Gaps = 88/532 (16%)

Query: 155 VYYEMVK--LNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           +++E+ +  L+  P +++    +IN   +S   E A+   ++M  RG++P   T+  ++ 
Sbjct: 66  LFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLI 125

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            L + N  ++A+R+F + K +    D  ++  ++ G C++  +D+   +L   E+ G   
Sbjct: 126 LLIKSNFFEKAWRVFNETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG--- 181

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
                                           + P+VV+Y  +I G  + G ++   +L 
Sbjct: 182 --------------------------------LSPNVVVYTTLIDGCCKNGDIERGKQLF 209

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M E  +V + Y Y  LI GF  +GL      L  ++     +PN +T+  +IC  C +
Sbjct: 210 YKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCND 269

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLR 450
           G +++A +LF++M + G   +V  +N LI GLC+   + +A  L  +M+  G +P L   
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLI-- 327

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                       S  T+++ YC+ G + KA  +  Q+  SG  P + TYN LI GF +  
Sbjct: 328 ------------SYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 375

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           N  G   + +E++ +GL P  VTY  L++ L R D  E AF+I+  M + G      +Y 
Sbjct: 376 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 435

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
            L+   C                  + G   E+ K               + L EM  K 
Sbjct: 436 VLIHGLC------------------VVGDMKEASK-------------LFKSLDEMHLKP 464

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           ND     Y   + G C++G    AL +   + E   +    S    I  LCK
Sbjct: 465 ND---VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCK 513



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 4/279 (1%)

Query: 77  NGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           N F+L+    DE+R   V+     +  LI G  +     +A     +MK     P++  Y
Sbjct: 274 NAFELF----DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 329

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +++          A +++ +M      P++ T+++LI G S++  +     M+ EM  
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 389

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           RG+ P+K TYTI++  L + +  ++A++++  M+ +G   D   Y  L++G C +  + E
Sbjct: 390 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 449

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A  L +S ++    P    Y+ +I G  +      A    ++M E  + P+V  Y   I 
Sbjct: 450 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIX 509

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            L +  K  +A  LL DM E G+ P    +N + K   D
Sbjct: 510 ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 548


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 258/553 (46%), Gaps = 26/553 (4%)

Query: 2   SSTLNEVLTILDTVTPIEPALEP--------LLPFLSKTTVTSVIMKTKNPQVGFRFFIW 53
           S  + ++L +LD  + +E  L+         L P      + SV ++ K P+V  RFF W
Sbjct: 79  SPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNFVTFVLQSVELREK-PEVAVRFFFW 137

Query: 54  AAKRKR-LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           A K+K+ +     + ++I +L              EL+   + +       LI  +  +G
Sbjct: 138 AGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLG 197

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
             E+ L  + +MKE    P +Y YN ++N          A  V+  M     +P+ VT++
Sbjct: 198 LVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYN 257

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
           ++I G  K+GK + A++   +M  + + P+K TY  +I         D    L+L+M++ 
Sbjct: 258 IMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEER 317

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G      +Y+ ++ G CK R+  EA A+  +  + G    +  Y+ LID   +    +EA
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 377

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
              + +M  E  EPD V Y V++ GL ++G++ D M+L    R +G+  +   Y +LI G
Sbjct: 378 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 437

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
               G ++ A +L  E+ ++    +++ +  +I  + ++G +D A  LF +ME+ GC  +
Sbjct: 438 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 497

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           V  F  LIDGL K  + E+A   + KM + G  PT+              AS + +    
Sbjct: 498 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTV--------------ASFRALAIGL 543

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G + +A KIL  LA  G +P+   +  +IN  CK   I  A KL   +  +G     
Sbjct: 544 CLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRGREIPG 602

Query: 532 VTYGTLINGLQRV 544
                LIN L++ 
Sbjct: 603 RIRTVLINALRKA 615



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 262/588 (44%), Gaps = 69/588 (11%)

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           VKL+  PN VTF  ++  +    K EVA++      ++    +K    + +  L   +  
Sbjct: 108 VKLS--PNFVTF--VLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSAD 163

Query: 220 DEAYRL-FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
               RL F ++KD G      A N+L+  F  L  V+E L + R  +++G  P L +Y+ 
Sbjct: 164 LVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNF 223

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L++GL  +   + A   +  M   KI PD V Y +MI+G  +AGK++ AM+   DM  + 
Sbjct: 224 LVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKN 283

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + PD   Y  LI+        D   SL +E+ +R      H+++++I G+C+     +A 
Sbjct: 284 VKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAY 343

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
            +F  M + GC                     +AN+  Y                     
Sbjct: 344 AVFETMNQKGC---------------------RANVAIY--------------------- 361

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
                   +++ Y   G + +A ++  ++   G  PD +TY+ L+NG CK G ++  ++L
Sbjct: 362 ------TALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMEL 415

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
           F   + KG+  +++ Y +LI+GL +  R EDA  +F +M + GC      Y +++    +
Sbjct: 416 FDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAK 475

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
             K   A +L+ +   +     D+++ +    I+   ++ + E AI+   +M  K     
Sbjct: 476 HGKIDQALALFGRMEEEGC---DQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPT 532

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +A +    IGLC  G+V  A  I   L     I+   +   +I+ LCK   +  A     
Sbjct: 533 VASFRALAIGLCLCGKVARACKILDDLAPM-GIIPETAFEDMINTLCKAQRIKEAC---- 587

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS---VGYD 739
             L +G + R R     +R++L +   K  ++  ++  M S   +GYD
Sbjct: 588 -KLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYD 634


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 265/546 (48%), Gaps = 19/546 (3%)

Query: 51  FIWAAKRKRLRSFAS--NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LIS 106
           F W   ++ LRS      S +IS L +    D  W  L   R+      ++VF    LI 
Sbjct: 107 FDWMVLQQNLRSQWDKVTSTIISSLGRLGRSD--WAQLIFDRAVGAGFGNNVFVYSSLIC 164

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
            Y + G   KA+E F  MK   C+P++ +YNAV++   +   +  AL ++ EM++    P
Sbjct: 165 AYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP 223

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           + +TF+ LI+   ++ + E   ++  EM +RGI  +  TY  +I+  C+  +      L 
Sbjct: 224 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 283

Query: 227 LKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             M K SG  P  + Y+ +++G+ KL    EA+AL +        P    Y+ ++D   R
Sbjct: 284 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 343

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
              +DEA++  R M E     D+V Y  ++    + GK ++AM LL +M++RG  P+   
Sbjct: 344 LGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILT 403

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ALI  +C  G    A +L  ++ K    P+   ++ L+ G C+NG  D+A  L  +M 
Sbjct: 404 YSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA 463

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N+L+D   +   + + N    +  +    T+ L+ S   ++       Q
Sbjct: 464 DNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQ-------Q 516

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++V+      L+  A ++  ++A++G  P+++T++S++N      ++  A  L + +++ 
Sbjct: 517 SLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRVF 576

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL--MTWSCRRRKFS 583
             R   VT+G L+    RV R  DA  +F ++   G   + A Y +L  + W   + K +
Sbjct: 577 DGRVYGVTHGLLMGFRIRVWR--DAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAKAA 634

Query: 584 LAFSLW 589
               +W
Sbjct: 635 KDRHVW 640



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 196/406 (48%), Gaps = 21/406 (5%)

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKF--TYTIVISGLCQINRADEAYRLFLKMK 230
            ++  L  SG+ E  +K  D M  +  L +++    + +IS L ++ R+D A  +F +  
Sbjct: 89  FIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAV 148

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYSCLIDGLFRAKR 288
            +G   +   Y++L+  + +  ++ +A+ +   FE    V  P L  Y+ +ID   +   
Sbjct: 149 GAGFGNNVFVYSSLICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGD 205

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           Y  A   +R+M E+ + PD + +  +I     A + ++  ++ ++M ERGI  D   YN 
Sbjct: 206 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 265

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           LI  +C  G +    +L   + K   + P+  T++ +I G  + G+  +A  LF +M   
Sbjct: 266 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 325

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P    +N ++D   + G  ++A+ +   ME                   D  +   +
Sbjct: 326 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAME-------------EAGFAKDIVTYNAL 372

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ Y   G   +A  +L ++ + G  P+I+TY++LI+ +CK G    A+ LF++++  GL
Sbjct: 373 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 432

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +PD V Y TL++G  +    ++A  +  +M  NG  P+   Y SL+
Sbjct: 433 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 478


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 244/532 (45%), Gaps = 59/532 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + ++++ Y + GD  +A E+F KM+    +P  ++Y  +++     +    AL+   +M 
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+L++G +K+G  E A     E  ++    N   Y  +I   CQ    D
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M++ G       Y+ +++G+  +   D+ L +   F++ G  P + +Y CLI
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    ++M    I+ ++  Y ++I G  +     +A  +  D+ + GI 
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I  FC +G +D+A     E+ K+   P T TF  +I G  R G +  A  +
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDV 613

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M  +GC P+V  +NALI GL +  ++EKA  +  +M                     
Sbjct: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA----------------- 480
             + GK  T F +L   G ++ D  + + +++  C +G +  A                 
Sbjct: 674 LGDTGKAFTYFTKLRDEGLQL-DVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 732

Query: 481 -YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            Y IL+                 Q+   G  PDI TY S IN   K G++  A K  +E+
Sbjct: 733 IYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEM 792

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +  G++P+  TY TLING  R    E A   F +M  +G  P  AVY  LMT
Sbjct: 793 KSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMT 844



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 217/516 (42%), Gaps = 48/516 (9%)

Query: 26  LPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT 85
           +  ++ + + S   KT N +    +F  A ++    +      +I    +    D     
Sbjct: 379 MSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEAL 438

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           + E+    +    D++  ++ GY  VGD +K L  F + KE    P V  Y  ++N+  +
Sbjct: 439 VREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAK 498

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 AL V  EM       N+ T+S+LING  K      A  + +++ + GI P+   
Sbjct: 499 LGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVL 558

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I+  C + + D A     +M+     P    +  +++GF +   + +AL +     
Sbjct: 559 YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR 618

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
             G +P + +Y+ LI GL   ++ ++A     +M    + P+   Y  ++ G +  G   
Sbjct: 619 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 678

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A    + +R+ G+  D Y Y AL+K  C  G +  A ++  E+  ++   NT  + ILI
Sbjct: 679 KAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILI 738

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            G  R G + +A  L  +M++ G  P +  + + I+   KAG++++A             
Sbjct: 739 DGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRAT------------ 786

Query: 446 TLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
                                               K + ++   G  P++ TY +LING
Sbjct: 787 ------------------------------------KTIEEMKSVGVKPNVKTYTTLING 810

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           + +      AL  F+E++L GL+PD   Y  L+  L
Sbjct: 811 WARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 227/543 (41%), Gaps = 61/543 (11%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P++  Y ++++   +      A   F KM+  G  P    Y  L++ +   R ++EAL+ 
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +R  +++G    L +YS L+ G  +    + A  W+++  E+    + ++YG +I    +
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV-EIWKRDSL-PNT 378
              +  A  L+ +M E GI      Y+ ++ G+  +G  D+ + L V E +K   L P+ 
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVG--DEDKCLLVFERFKECGLNPSV 486

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
            T+  LI    + G V  A ++  +ME AG   ++  ++ LI+G                
Sbjct: 487 ITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING---------------- 530

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
                    FL+L    N                       A+ I   L + G  PD++ 
Sbjct: 531 ---------FLKLKDWAN-----------------------AFAIFEDLIKDGIKPDVVL 558

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           YN++I  FC +G ++ A+   KE+Q +  +P + T+  +I+G  R    + A  +F  M 
Sbjct: 559 YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR 618

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVE 617
            +GC P+   Y +L+     +RK   A  +  +  L  +S  +      +  +   G+  
Sbjct: 619 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 678

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--- 674
            A     ++  +     +  Y   L   C+ G+++ AL   +V  E  A   P +     
Sbjct: 679 KAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL---AVTKEMSAQNIPRNTFIYN 735

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMK 734
            LI G  +RG +  A D+     + G  ++P +  Y       SK      A   +  MK
Sbjct: 736 ILIDGWARRGDIWEAADLMQQMKREG--VQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793

Query: 735 SVG 737
           SVG
Sbjct: 794 SVG 796



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 176/416 (42%), Gaps = 14/416 (3%)

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
           FE   +P    YG+M+   +  G +  A +    MR RGI P ++ Y  LI  +     +
Sbjct: 303 FERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDM 362

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           ++A S   ++ +     +  T++IL+ G  + G  + A   F + ++     +  ++  +
Sbjct: 363 EEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNI 422

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I   C+   ++KA  L  +ME            +G +   D     TM++ Y   G   K
Sbjct: 423 IYAYCQRCNMDKAEALVREME-----------EEGIDAPID--IYHTMMDGYTMVGDEDK 469

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              +  +  E G  P +ITY  LIN + K+G ++ AL++ KE++  G++ +  TY  LIN
Sbjct: 470 CLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLIN 529

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G  ++    +AF IF  + ++G  P   +Y +++T  C   K   A     +  +     
Sbjct: 530 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 589

Query: 600 DDES-MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
              + M  I  F +KGE++ A+     M        +  Y   ++GL +  ++++A  I 
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRS 714
             +          +   ++HG    G    A   F      G  L       LL++
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKA 705



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/402 (20%), Positives = 164/402 (40%), Gaps = 25/402 (6%)

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           V  ++R   P+   + +++    R G +  A++ F KM   G  PS  ++  LI      
Sbjct: 300 VSAFERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVG 359

Query: 427 GELEKANLLFYKM-EIGKNPTLFLR------LSQGGNRVHDKASLQTMVEQ--------- 470
            ++E+A     KM E G   +L          ++ GN        Q   E+         
Sbjct: 360 RDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIY 419

Query: 471 ------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
                 YC    + KA  ++ ++ E G    I  Y+++++G+  VG+ +  L +F+  + 
Sbjct: 420 GNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKE 479

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            GL P  +TYG LIN   ++ +   A  +  +M   G   +   Y  L+    + + ++ 
Sbjct: 480 CGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 539

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           AF+++   ++D    D     + I  F   G+++ A+  + EM  + +      +   + 
Sbjct: 540 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 599

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFIL 703
           G  + G++K+AL++F ++     I T  +   LI GL ++  ++ A  +       G   
Sbjct: 600 GFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSP 659

Query: 704 RPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                  ++       D  K   Y    +++  G  LD   Y
Sbjct: 660 NEHTYTTIMHGYASLGDTGKAFTY--FTKLRDEGLQLDVYTY 699


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 221/476 (46%), Gaps = 33/476 (6%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           + SF +M   +  P V  +  +L+   + + +   ++++Y++      PNIV+ S+LIN 
Sbjct: 56  VSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINC 115

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
               G+   A  +  ++ + G  PN  T T ++ G C  ++  EA      +   G   +
Sbjct: 116 YCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFN 175

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            V+Y  L+NG CK+     AL +LR  E       +  YS +IDGL + K  ++AY  Y 
Sbjct: 176 QVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYS 235

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M  ++I P VV    +I G    G+ K+A  LL +M  + I PD Y +N L+   C  G
Sbjct: 236 EMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEG 295

Query: 358 LLDQARSLQVEIWKRDSLPNT--------------------HTFTILICGMCRNGMVDDA 397
            + +A+S    + K   +P+                     H ++I+I G C+  MVD A
Sbjct: 296 KIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKA 355

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNR 457
             LF +M      P    +N+LIDGLCK+G +  A  L  +M     P            
Sbjct: 356 LSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPA----------- 404

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +  ++++  C    + KA  ++ ++ + G   D+ TYN LI+G CK G +  A  
Sbjct: 405 --DIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQV 462

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +F++L +KG      TY  +INGL       +A  +  +M  NGC P     ++++
Sbjct: 463 IFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETII 518



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 221/433 (51%), Gaps = 9/433 (2%)

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           ++ ++ M+ LN  P+++ F  +++ L K       I +  ++   GI PN  + +I+I+ 
Sbjct: 56  VSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINC 115

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C + +   A+ +F K+   G  P+ +    L+ GFC   +V EAL         GF   
Sbjct: 116 YCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFN 175

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             SY  LI+GL +      A    R++  + +  DVV+Y  +I GL +   V DA +L S
Sbjct: 176 QVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYS 235

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M  + I P     N+LI G+C +G   +A  L  E+  ++  P+ +TF IL+  +C+ G
Sbjct: 236 EMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEG 295

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL-------FYKME-IGKN 444
            + +A+     M K G  P V  +++L+DG C   E+ KA  +       F K++ + K 
Sbjct: 296 KIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKA 355

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
            +LF  + +      D  +  ++++  C +G I  A++++ ++ +SG   DIITYNSLI+
Sbjct: 356 LSLFYEM-RCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLID 414

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             CK  +++ A+ L K+++ +G++ D  TY  LI+GL +  R +DA  IF  +   G   
Sbjct: 415 ALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNL 474

Query: 565 SPAVYKSLMTWSC 577
           +   Y  ++   C
Sbjct: 475 TVWTYTIMINGLC 487



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 223/482 (46%), Gaps = 39/482 (8%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S+++ +   P    L++Q   E      ++VS    +LI+ Y  +G    A   F K+ +
Sbjct: 79  SSLVKLKHYPTVISLFYQL--EFNGIKPNIVS--LSILINCYCHLGQMRFAFSIFAKILK 134

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               P+      ++           AL  +  ++ L    N V++  LINGL K G+T  
Sbjct: 135 MGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRA 194

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++ML ++  + +  +   Y+ +I GLC+    ++AY L+ +M     SP  V  N+L+ 
Sbjct: 195 ALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIY 254

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C + +  EA  LLR        P + +++ L+D L +  +  EA +    M +E + P
Sbjct: 255 GYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMP 314

Query: 307 DVV--------------------LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
           DVV                    +Y ++I G  +   V  A+ L  +MR R I PDT  Y
Sbjct: 315 DVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTY 374

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           N+LI G C  G +  A  L  E+       +  T+  LI  +C+N  VD A  L  K++ 
Sbjct: 375 NSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKD 434

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQ 465
            G    +  +N LIDGLCK G L+ A ++F  + I G N T++              +  
Sbjct: 435 QGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVW--------------TYT 480

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            M+   C  GL+++A  +L ++ ++G +PD +T  ++I    +      A KL +E+  +
Sbjct: 481 IMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540

Query: 526 GL 527
           GL
Sbjct: 541 GL 542



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 232/524 (44%), Gaps = 64/524 (12%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+   +  ++S L ++        LF +++ +G  P+ V+ + L+N +C L ++  A ++
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
                K G+ P   + + L+ G     +  EA  ++  +       + V YG +I GL +
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
            G+ + A+++L  +  + +  D   Y+ +I G C   L++ A  L  E+  +   P   T
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL-LFYKM 439
              LI G C  G   +A  L  +M      P V  FN L+D LCK G++++A   +   M
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           + G  P              D  +  ++++ YC    ++KA  +               Y
Sbjct: 309 KEGVMP--------------DVVTYSSLMDGYCLVNEVNKAKHV---------------Y 339

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
           + +INGFCK+  ++ AL LF E++ + + PD+VTY +LI+GL +  R   A+ +  +M  
Sbjct: 340 SIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRD 399

Query: 560 NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
           +G       Y SL+   C+      A +L               +K I++          
Sbjct: 400 SGQPADIITYNSLIDALCKNHHVDKAIAL---------------VKKIKD---------- 434

Query: 620 IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHG 679
            QG+           +  Y I + GLC+ G++K+A  IF  L+     +T  +   +I+G
Sbjct: 435 -QGI--------QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMING 485

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
           LC  G L+ A  +      NG +     C  ++R+L  +  N++
Sbjct: 486 LCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNER 529


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/687 (25%), Positives = 301/687 (43%), Gaps = 52/687 (7%)

Query: 112 GDCEKALESFGKMKEFDCQ-PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           G+ + A     KMK   C  P+V  YN +L+   +K  F  A+ V  +M K     ++ T
Sbjct: 239 GNLKGAKHMIHKMKS--CSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYT 296

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           ++++I+ L K  ++  A  +L  M    + P++ TY  +I G    ++   A  +F +M 
Sbjct: 297 YNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEML 356

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G  P    Y  L++G+C+   +DEAL +L   +  G  P   +YS +++G        
Sbjct: 357 RQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVH 411

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA++ Y  M +    PDV  Y  ++RGL + G +  A + +S +       D    NAL+
Sbjct: 412 EAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALL 471

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G C+ G LD+A  L  ++   + +P+ HT+TIL+ G CR G +  A  L   M + G  
Sbjct: 472 LGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLV 531

Query: 411 PSVGMFNALIDGLCKAGELEKANLLF---------YKMEIGKNPTLFLRLSQGG------ 455
           P +  +  L+ GL K G+++ A+ LF         Y   I  N  +   L  G       
Sbjct: 532 PDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEM 591

Query: 456 -------NRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                  N+V+ + AS   ++  +   G + ++  +   +   G  P  +TY  LI G  
Sbjct: 592 TIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLS 651

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G I  A+K   ++ L+G+ PD +++  LIN      R  DA ++F  M     +PS  
Sbjct: 652 KHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSK 711

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQY----LRDI--SGRDDESMKSIEEFLQKGEVENAIQ 621
            Y +++    R+         WLQ+    LRD+  SG + +    I     K    + I 
Sbjct: 712 TYSAMINGLIRKN--------WLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGD-IN 762

Query: 622 GLLEMDFKLNDFQLAPYTIW----LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
           G   +  ++    + P  +     + GL + G+V+E + +F  ++    + T  +   L+
Sbjct: 763 GAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLM 822

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG 737
           HGLCK   +  A+   L +L     L+  V  Y +      K      A  L   MKS G
Sbjct: 823 HGLCKEAKISDAL--HLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG 880

Query: 738 YDLDACLYPKTKSLLPGPWNTREMENM 764
              +   Y      + G   T E E +
Sbjct: 881 LRPNVTTYTTLTEAIYGTGRTLEGEKL 907



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 164/669 (24%), Positives = 299/669 (44%), Gaps = 28/669 (4%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           G +  I   K   L +  + + ++   +K   F      L+++    V      + ++I 
Sbjct: 243 GAKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMID 302

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
              K+     A     +M+  +  PD   YN ++   F +   +LA+ ++ EM++    P
Sbjct: 303 KLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKP 362

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++ T++ LI+G  ++G  + A+++L EM   G+ P++ TY+ +++G        EA+ ++
Sbjct: 363 SLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVY 417

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M+  GCSPD   Y  LL G CK   + +A   +             + + L+ G+   
Sbjct: 418 DNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNH 477

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              DEA     KM      PD+  Y +++ G    GK+  A+ LL  M E+G+VPD   Y
Sbjct: 478 GSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTY 537

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKME 405
             L+KG    G +  A  L  EI  ++ +  +   +  ++ G  + G +   +     M 
Sbjct: 538 TCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMN 597

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
           +   +P+   +N L+ G  K G L ++  L+  M   G  PT                + 
Sbjct: 598 QNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPT--------------NVTY 643

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
           + ++      G+I  A K L ++   G  PD ++++ LIN F +   ++ AL+LF  ++ 
Sbjct: 644 RLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKW 703

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
             + P S TY  +INGL R +  + +  +   M ++G  P    Y +L+   CR    + 
Sbjct: 704 LYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDING 763

Query: 585 AFSL--WLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIW 641
           AF L   +  L  +     +S  SI   L K G+VE  I     +        +A +T  
Sbjct: 764 AFRLKEEMTALGIVPAEVADS--SIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTL 821

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           + GLC++ ++ +AL++ S++  C   +   +   LI GLCK   +  A++++      G 
Sbjct: 822 MHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG- 880

Query: 702 ILRPRVCNY 710
            LRP V  Y
Sbjct: 881 -LRPNVTTY 888



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 247/549 (44%), Gaps = 58/549 (10%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S A+ + +I    +    D   + L E++   V      +  +++G        +A   +
Sbjct: 363 SLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVY 417

Query: 122 GKMKEFDCQPDVYIYNAVL-----------------------NIAFRKQLFLL------- 151
             M+++ C PDVY Y  +L                       +   +K L  L       
Sbjct: 418 DNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNH 477

Query: 152 -----ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                AL +  +MV +N +P+I T+++L++G  + GK   A+ +L  M ++G++P+  TY
Sbjct: 478 GSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTY 537

Query: 207 TIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           T ++ GL +  +   A  LF ++    G   D +AYN+++NG+ K  ++ +    +    
Sbjct: 538 TCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMN 597

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           ++   P   SY+ L+ G  +      +   Y+ M  + I+P  V Y ++I GLS+ G ++
Sbjct: 598 QNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIE 657

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL-QVEIWKRDSLPNTHTFTIL 384
            A+K L  M   GI PD   ++ LI  F +   +  A  L     W   S P++ T++ +
Sbjct: 658 IAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMS-PSSKTYSAM 716

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGK 443
           I G+ R   +  +  +   M ++G  P    + ALI+  C+ G++  A  L  +M  +G 
Sbjct: 717 INGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGI 776

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
            P               + +  ++V      G + +   +   +  +G +P I T+ +L+
Sbjct: 777 VPA--------------EVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLM 822

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G CK   I+ AL L   ++  GL+ D VTY  LI GL ++    DA  ++ +M   G  
Sbjct: 823 HGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLR 882

Query: 564 PSPAVYKSL 572
           P+   Y +L
Sbjct: 883 PNVTTYTTL 891



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 35/344 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +++GY K G   K   +   M +    P+   YN +++   +K     ++ +Y +MV+  
Sbjct: 576 MMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG 635

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P  VT+ LLI GLSK G  E+A+K LD+M   GI P++ ++ ++I+   + +R  +A 
Sbjct: 636 IKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDAL 695

Query: 224 RLFLKMK-----------------------------------DSGCSPDFVAYNALLNGF 248
           +LF  MK                                   +SG  P    Y AL+N  
Sbjct: 696 QLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAK 755

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C+   ++ A  L       G VP   + S ++ GL +  + +E    +  +    + P +
Sbjct: 756 CRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTI 815

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             +  ++ GL +  K+ DA+ L S M   G+  D   YN LI G C +  +  A  L  E
Sbjct: 816 ATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEE 875

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           +  +   PN  T+T L   +   G   + +KL N +E  G  PS
Sbjct: 876 MKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 10/362 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI----YNAVLNIAFRKQLFLLALAV 155
            +  L+ G  K G  + A   F   +E  C+  +Y     YN+++N   +          
Sbjct: 536 TYTCLLKGLIKEGQVKAASYLF---QEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMT 592

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            Y+M +    PN  ++++L++G  K G    +I +  +M ++GI P   TY ++I GL +
Sbjct: 593 IYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSK 652

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
               + A +   KM   G  PD ++++ L+N F +  R+ +AL L    +     P   +
Sbjct: 653 HGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKT 712

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           YS +I+GL R      +    R M E  +EP    Y  +I      G +  A +L  +M 
Sbjct: 713 YSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMT 772

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
             GIVP     +++++G    G +++   +   I +   +P   TFT L+ G+C+   + 
Sbjct: 773 ALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKIS 832

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLS 452
           DA  L + ME  G    V  +N LI GLCK   +  A  L+ +M+   +  N T +  L+
Sbjct: 833 DALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLT 892

Query: 453 QG 454
           + 
Sbjct: 893 EA 894



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 161/685 (23%), Positives = 260/685 (37%), Gaps = 172/685 (25%)

Query: 182 GKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEAYRLF--LKMKDSGCSPDF 238
           G  ++A+K+L  + QR G+      Y +    L Q     +A  L   L M    CS  F
Sbjct: 82  GHGKLALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAVF 141

Query: 239 --------------VAYNALLNGFCKLRR-VDEALALLRS-------------------- 263
                         + ++ L+N + K +R VD ++A+L                      
Sbjct: 142 SSLLCTISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALV 201

Query: 264 ----------FEKDGFVPR--LGSYSC-------LIDGLFRAKR---------------- 288
                     F K+G V +  L   +C        I+G  +  +                
Sbjct: 202 EIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVIT 261

Query: 289 YDEAYAWYRK-------------MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+    WY K             M +  +E DV  Y +MI  L +  +   A  LL  MR
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMR 321

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
              + PD   YN LIKGF D   +  A  +  E+ ++   P+  T+T LI G CRNG +D
Sbjct: 322 GDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTID 381

Query: 396 DAQK------------------------------LFNKMEKAGCFPSVGMFNALIDGLCK 425
           +A +                              +++ MEK GC P V  +  L+ GLCK
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCK 441

Query: 426 AGELEKAN-----LLFYKMEIGKNP--TLFLRLSQGG---------------NRVHDKAS 463
            G L +A      ++     I +     L L +   G               N + D  +
Sbjct: 442 GGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHT 501

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              ++  +C  G I  A  +L  + E G +PDI+TY  L+ G  K G +  A  LF+E+ 
Sbjct: 502 YTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEII 561

Query: 524 LK-GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
            K G+  D + Y +++NG  +  +          M QN   P+PA Y  LM    ++   
Sbjct: 562 CKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHL 621

Query: 583 SLAFSLWLQYLRD------------ISGRDDESMKSIE-EFLQKGEVENAIQGLLEMDFK 629
           S +  L+   +R             I G     M  I  +FL K  +E      L  D  
Sbjct: 622 SRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVL 681

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYL 686
           +N F             +  ++ +AL +F+ +   K +   PS      +I+GL ++ +L
Sbjct: 682 INAFS------------EKSRMSDALQLFNCM---KWLYMSPSSKTYSAMINGLIRKNWL 726

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYL 711
             + DV    +++G  L P+  +Y+
Sbjct: 727 QHSCDVLRDMVESG--LEPKHTHYI 749



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G  K G  E+ +  F  +      P +  +  +++   ++     AL +   M    
Sbjct: 786 IVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCG 845

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              ++VT+++LI GL K      A+++ +EM  +G+ PN  TYT +   +    R  E  
Sbjct: 846 LKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGE 905

Query: 224 RLFLKMKDSGCSPDFV 239
           +L   ++D G  P + 
Sbjct: 906 KLLNDIEDRGLVPSYT 921


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/599 (27%), Positives = 272/599 (45%), Gaps = 21/599 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y + G    A+ +F  M     +P VY  N ++    +     L    + +M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQM 166

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PN+ +F++LI+ L   GK + A+ +L  M + G +P   +Y  ++S  C+  R 
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L   M+  G   D   YN  ++  C+  R  +   +L+        P   SY+ L
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +  +   A   + +M E  + P+++ Y ++I G    G  ++A++LL  M    +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDV 346

Query: 340 VPDTYCYNALIKGFCDLGLLDQARS-LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            P+      L+ G       D AR+ L+     R SL N  + T++I G+CRNG++D+A 
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL-NCISHTVMIDGLCRNGLLDEAF 405

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +L  +M K G +P +  F+ LI+G CK G L KA  +  K+             +G   V
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKI-----------YREG--FV 452

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +     T++   C  G +++  K    +  +G   D  T NSL+   C+ G +  A + 
Sbjct: 453 PNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +   GL P+SVT+  +ING   V     AF +F +M   G  PSP  Y SL+   C+
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCK 572

Query: 579 RRKFSLAFSLWLQYLRDIS-GRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
            + F  A  L L+ L  I    D  S  + I E  + G +  A++   EM          
Sbjct: 573 GQNFWEARKL-LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVF 693
            YT  L GL ++G++  A      L++ K I+T  S V    I GL K G    A+ +F
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQ-KEILTLNSIVYTCFIDGLFKAGQSKAALYLF 689



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 242/519 (46%), Gaps = 15/519 (2%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ ++K     L W    ++ +  V      F +LIS     G  +KA+     M+   
Sbjct: 146 IMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNG 205

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P +  YN +L+   +K  F  AL + + M       ++ T+++ I+ L ++ ++    
Sbjct: 206 YVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGY 265

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L +M  + I PN+ +Y  +I+G  +  +   A R+F +M +   SP+ + YN L+NG+
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C     +EAL LL   E +   P   +   L++GL+++ ++D A     +    +   + 
Sbjct: 326 CINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNC 385

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + + VMI GL   G + +A +LL +M + G+ PD   ++ LI GFC +G L++A+ +  +
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSK 445

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I++   +PN   F+ LI   C+ G V +  K +  M   G        N+L+  LC+ G+
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 429 L-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           L E    L +   IG  P              +  +   ++  Y   G    A+ +  ++
Sbjct: 506 LVEAEEFLHHISRIGLVP--------------NSVTFDCIINGYANVGDGSGAFSVFDKM 551

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G+ P   TY SL+   CK  N   A KL K+L    L  D+++Y TLI  + +    
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            +A R+F +M QN   P    Y  +++   R  +   AF
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 198/419 (47%), Gaps = 13/419 (3%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C  N   F LLI    + G    A+     M  RG  P+ +T  ++++ + +  RA   +
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F +M  S   P+  ++N L++  C   ++ +A+ +L   E++G+VP + SY+ L+   
Sbjct: 161 XFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +  R+  A      M  + I+ DV  Y + I  L    +      +L  MR + I P+ 
Sbjct: 221 CKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNE 280

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN LI GF   G +  A  +  E+ + +  PN  T+ ILI G C NG  ++A +L + 
Sbjct: 281 VSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDV 340

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           ME     P+      L++GL K+ + + A  +  +  I +                +  S
Sbjct: 341 MEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL-------------NCIS 387

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              M++  C  GL+ +A+++L+++ + G  PDIIT++ LINGFCKVGN+N A ++  ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIY 447

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
            +G  P++V + TLI    +V    +  + +  M  NG         SL+   C   K 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKL 506



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 240/513 (46%), Gaps = 25/513 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F  LI    KVG+  + ++ +  M       D +  N+++         + A    + +
Sbjct: 457 IFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI 516

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++  +PN VTF  +ING +  G    A  + D+M   G  P+ FTY  ++  LC+    
Sbjct: 517 SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNF 576

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +L  K+     + D ++YN L+    K   + EA+ L     ++  +P   +Y+C+
Sbjct: 577 WEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636

Query: 280 IDGLFRAKRYDEAYAWY-RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           + GL R  R   A+ +  R M +E +  + ++Y   I GL +AG+ K A+ L  +M E+G
Sbjct: 637 LSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  D    N++  G+  +G +  A SL  +   ++ +PN  TF IL+ G  R   +    
Sbjct: 697 LSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCF 756

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL----FLRLSQG 454
           KL+N M ++G FP+   +++LI GLC  G LE   +   KM I ++ T+    F  L + 
Sbjct: 757 KLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELG-IKMLKMFIAESSTIDDLTFNMLIRK 815

Query: 455 GNRVHD--------------KASL----QTMVEQYCTAGLIHKAYKILM-QLAESGNLPD 495
              ++D              + SL    Q  V       ++ + Y + M ++ + G +P 
Sbjct: 816 CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              Y +++   C+VG+I GA KL  ++   G+  D      ++ GL    + E+A  I  
Sbjct: 876 SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +M +    P+ + + +LM   C++  F  A +L
Sbjct: 936 RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 245/545 (44%), Gaps = 29/545 (5%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L ++R+  ++     +  LI+G+ K G    A   F +M E +  P++  YN ++N 
Sbjct: 265 YLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILING 324

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
                 F  AL +   M   +  PN VT   L+NGL KS K +VA  +L+  +      N
Sbjct: 325 YCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLN 384

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             ++T++I GLC+    DEA++L ++M   G  PD + ++ L+NGFCK+  +++A  ++ 
Sbjct: 385 CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMS 444

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              ++GFVP    +S LI    +     E   +Y  M       D      ++  L E G
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENG 504

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K+ +A + L  +   G+VP++  ++ +I G+ ++G    A S+  ++      P+  T+ 
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYG 564

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFP---SVGMFNALIDGLCKAGELEKANLLFYKM 439
            L+  +C+     +A+KL  K+    C P       +N LI  + K+G L +A  LF +M
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLH---CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 440 --------------------EIGKNPTLFL---RLSQGGNRVHDKASLQTMVEQYCTAGL 476
                                 G+    F+   RL Q      +       ++    AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
              A  +  ++ E G   D+I  NS+ +G+ ++G +  A  L  + + K + P+  T+  
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L++G  R       F+++  M ++G  P+   Y SL+   C      L   +   ++ + 
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAES 801

Query: 597 SGRDD 601
           S  DD
Sbjct: 802 STIDD 806



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 224/519 (43%), Gaps = 90/519 (17%)

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            S  F  +I+GY  VGD   A   F KM      P  + Y ++L +  + Q F  A  +  
Sbjct: 525  SVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL-- 582

Query: 158  EMVKLNCLP---NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
             + KL+C+P   + ++++ LI  +SKSG    A+++ +EM Q  ILP+ +TYT ++SGL 
Sbjct: 583  -LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 215  QINR------------------------------------ADEAYRLFLKMKDSGCSPDF 238
            +  R                                    +  A  LF +M++ G S D 
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 239  VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            +A N++ +G+ ++ +V  A +L+        +P L +++ L+ G  R +     +  Y  
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 299  MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
            M      P+ + Y  +I GL   G ++  +K+L          D   +N LI+  C++  
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 359  LDQ----ARSLQV-------------------------------EIWKRDSLPNTHTFTI 383
            LD+      +++V                               E+ K+  +P +  +  
Sbjct: 822  LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
            ++  MCR G +  A KL ++M   G         A++ GL   G++E+A  +  +M    
Sbjct: 882  MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRM---- 937

Query: 444  NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                 LR+     ++   ++  T++  +C      +A+ + + +       DI+ YN LI
Sbjct: 938  -----LRMK----KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLI 988

Query: 504  NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            +  C  G++  AL  ++E++ KGL P+  TY  L++ + 
Sbjct: 989  SACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIS 1027



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 173/411 (42%), Gaps = 2/411 (0%)

Query: 29   LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            +S  T+   I K+ N     R F    +   L    + + ++S L++       +  L  
Sbjct: 596  ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 89   LRSGNV-SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            L    + ++ S V+   I G +K G  + AL  F +M+E     D+   N++ +   R  
Sbjct: 656  LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 148  LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                A ++  +    N +PN+ TF++L++G S+        K+ + M + G  PN+ TY 
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 208  IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
             +I GLC     +   ++         + D + +N L+   C++  +D+ + L  + E  
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
                   +   + D L R       + +  +M ++   P    Y  M++ +   G ++ A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             KL   M   GI  D     A+++G    G +++A  +   + +   +P T TFT L+  
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             C+     +A  L   ME       +  +N LI   C  G++  A L FY+
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA-LDFYE 1005


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 239/543 (44%), Gaps = 69/543 (12%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y   GD   A +    +      PD Y Y + +    R  +   A  V+  M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               CL    T++ L++GL  +G    A+ +   M      P+   Y  ++ GLC+  R 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  +   +G  P+ V YNAL++G+C    ++ AL +    + +   P + +Y+ L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL ++ + + A   + +M E  +EP+VV Y  +I+G    G ++ A +LL  M   G+
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+ + ++ LI   C    +++A+     + K+    N   +T LI G+C+ G +D A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL----- 451
           L  KM   G  P    +++LIDGLC+  +L +A L+   M    I  +P  +  +     
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 452 ----SQGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
               S+G  ++ DK           +    V  YC  G +  A  +++Q+ + G  P+++
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL-------------------- 537
           TYN+LI G+  +G ++ A   F+ +  KG +P+  +Y  L                    
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 538 ---------------------------INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
                                      I  L RVDR E+A   F  M     TPS  VY 
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613

Query: 571 SLM 573
           S++
Sbjct: 614 SII 616



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 197/425 (46%), Gaps = 13/425 (3%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N+ T++ LIN    +G    A + L  +   G+ P+ + YT  + G C+      A R+F
Sbjct: 71  NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
           + M   GC      Y ALL+G      V EA+ +      D   P    Y+ ++ GL  A
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
            R +EA     +      EP++V+Y  +I G   AG+++ A+K+   M      P+   Y
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
             LI G C  G +++A  L   + +    PN  T+T LI G C  G +  A +L + ME 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P+   F+ LID LCK  ++E+A L                L + G +V ++    +
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGS------------LVKKGVKV-NEVVYTS 357

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++  C  G I  A +++ ++   G +PD  +Y+SLI+G C+   ++ A  + +++  KG
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           ++   VTY  +I+ L R    E   +IF +M   G  P    Y   +   C   +   A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 587 SLWLQ 591
           S+ +Q
Sbjct: 478 SMIVQ 482



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 177/404 (43%), Gaps = 82/404 (20%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  LI GY   G+ E AL+ F  M    C P+V  Y  +++   +      A+ ++  M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           V+    PN+VT++ LI G    G  + A ++L  M   G++PN +T++++I  LC+  + 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA      +   G   + V Y +L++G CK  ++D A  L++    +GFVP   SYS L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIE---------------------------------- 305
           IDGL R K+  +A      M E+ I+                                  
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 306 -PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD+V Y V +R   E G+++DA  ++  M +RG+ P+   YN LI+G+ +LGL+ QA S
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 365 L-------------------------------QVEIWKRDSLPNTHT------------- 380
                                            V+IWK   + +                
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 381 ---FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
              ++  I  +CR   +++A+  F  M+ A   PS  ++ ++ID
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 176/406 (43%), Gaps = 28/406 (6%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +     ++  L+      D   L S M  R +      Y  LI  +C  G +  A+  
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNL----RTYTTLINAYCLAGDIPAAKQH 94

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              +      P+++ +T  + G CR GM+  A ++F  M   GC  +   + AL+ GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           AG + +A  +F  M             +  +   D     TMV   C AG   +A  +L 
Sbjct: 155 AGMVREAMTVFVGM-------------RADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +   +G  P+I+ YN+LI+G+C  G +  ALK+F+ +      P+  TY  LI+GL +  
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSG 261

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG---RDDE 602
           + E A  +F +M + G  P+   Y +L+   C       AF L   +L + +G    D  
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLL--HLMETNGLVPNDWT 319

Query: 603 SMKSIEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
               I+   ++ +VE A   +  L++   K+N+     YT  + GLC+ G++  A  +  
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV---YTSLIDGLCKTGKIDAADELMQ 376

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            ++    +    S   LI GLC++  L  A  +    ++ G    P
Sbjct: 377 KMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASP 422



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/197 (18%), Positives = 89/197 (45%), Gaps = 12/197 (6%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  + + +I  L++  G +   +  D++ +  ++     + V +  Y + G  E A    
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M +    P++  YN ++       L   A + +  MV     PN  ++++L+  + K 
Sbjct: 481 VQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540

Query: 182 GKTEVAIK------------MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
             ++ ++             +L+++T+R +      Y+  I  LC+++R +EA   F+ M
Sbjct: 541 SSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGM 600

Query: 230 KDSGCSPDFVAYNALLN 246
           +++  +P    Y ++++
Sbjct: 601 QNANLTPSEDVYTSIID 617


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 257/555 (46%), Gaps = 30/555 (5%)

Query: 33   TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
            +  +++   +   V   FF WA    + R F     V +M L              +   
Sbjct: 710  SAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSL--------------VGKC 755

Query: 93   NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            N+    +V   ++  + ++G  ++A++    M+         + N ++ +A   +L   A
Sbjct: 756  NLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYA 815

Query: 153  LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
              V+ EM      P+  T+  +I G  ++G    A + + EM +RG + +  T T++I+ 
Sbjct: 816  GNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITA 875

Query: 213  LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
             C+ +  + A   F K+   G SP+ + Y+++++G CK   V +A  LL    K+G+ P 
Sbjct: 876  FCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPN 935

Query: 273  LGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            + +++ LI GL +    + A+  + K+   +  +P+V  Y  MI G  +  K+  A  L 
Sbjct: 936  VYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 995

Query: 332  SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
              M+E+G+VP+T  Y  LI G C  G   +A  L   +      PNT T+  ++ G+C+ 
Sbjct: 996  ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 1055

Query: 392  GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
            G  ++A KL N   +         +  LI   CK  ++ +A +   KM ++G  P + L 
Sbjct: 1056 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL- 1114

Query: 451  LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                           T++  +C   ++  + K+  ++ + G  P   TY S+I G+C+  
Sbjct: 1115 -------------YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK 1161

Query: 511  NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
             ++ A+K F+++   G  PDS++YG LI+GL +  R ++A +++  M   G +P      
Sbjct: 1162 KVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV 1221

Query: 571  SLMTWSCRRRKFSLA 585
            +L    C+   F+ A
Sbjct: 1222 TLTYEYCKTEDFASA 1236



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 216/485 (44%), Gaps = 54/485 (11%)

Query: 86   LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
             DE+ +  V   S  +  +I GY + G+  +A     +M E     D      ++     
Sbjct: 819  FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 878

Query: 146  KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            K L   A+  ++++ K+   PN++ +S +I+GL K G  + A ++L+EM + G  PN +T
Sbjct: 879  KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 938

Query: 206  YTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            +T +I GLC+    + A+RLFLK+ +     P+   Y A+++G+CK  ++  A  L    
Sbjct: 939  HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 998

Query: 265  EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
            ++ G VP   +Y+ LIDG  +A  + +AY     M  E   P+   Y  ++ GL + G+ 
Sbjct: 999  KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 1058

Query: 325  KDAMKLL-------------------------SDMRER----------GIVPDTYCYNAL 349
            ++A KLL                         +DM +           G  PD + Y  L
Sbjct: 1059 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 1118

Query: 350  IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
            I  FC   ++  +  L  E+ K    P   T+T +ICG CR   V  A K F KM   GC
Sbjct: 1119 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 1178

Query: 410  FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P    + ALI GLCK   L++A  L+  M + G +P    R+              T+ 
Sbjct: 1179 APDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV--------------TLT 1224

Query: 469  EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             +YC       A  IL +L +      I T ++LI   C    +  A   F +L  K + 
Sbjct: 1225 YEYCKTEDFASAMVILERLNKK---LWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVN 1281

Query: 529  PDSVT 533
             D VT
Sbjct: 1282 VDRVT 1286



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 18/408 (4%)

Query: 185  EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            E A  + DEM+ RG+ P+  TY  +I G C+     EA R   +M + G   D      +
Sbjct: 813  EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLI 872

Query: 245  LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
            +  FC+   V+ A+       K G  P L +YS +I GL +     +A+    +M +   
Sbjct: 873  ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 932

Query: 305  EPDVVLYGVMIRGLSEAGKVKDAMKL-LSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            +P+V  +  +I GL + G  + A +L L  +R     P+ + Y A+I G+C    L +A 
Sbjct: 933  KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 992

Query: 364  SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
             L   + ++  +PNT+T+T LI G C+ G    A +L   M   G FP+   +N+++DGL
Sbjct: 993  MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052

Query: 424  CKAGELEKANLLFYKMEIGKNPTLFLRLSQG-GNRVH-DKASLQTMVEQYCTAGLIHKAY 481
            CK G  E+A               F  L+ G  N++  D  +   ++ + C    +++A 
Sbjct: 1053 CKRGRAEEA---------------FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 1097

Query: 482  KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
              L ++ + G  PDI  Y +LI  FC+   +  + KLF E+   GL P   TY ++I G 
Sbjct: 1098 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 1157

Query: 542  QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             R  +   A + F +M  +GC P    Y +L++  C+  +   A  L+
Sbjct: 1158 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 1205



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 7/238 (2%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             + +LIS   K  D  +AL    KM +   QPD+++Y  ++    R+ +   +  ++ E+
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +KL   P   T++ +I G  +  K  +A+K   +M+  G  P+  +Y  +ISGLC+ +R 
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            DEA +L+  M D G SP  V    L   +CK      A+ +L    K  ++  + +   L
Sbjct: 1199 DEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---L 1255

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            I  L   K+   A  ++ K+ ++++  D V          E+ K      L+SD+ ER
Sbjct: 1256 IRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNK----YALVSDLSER 1309



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 24/298 (8%)

Query: 460  DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            D  + + ++  YC  G + +A + + ++ E G + D  T   +I  FC+   +N A+  F
Sbjct: 830  DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFF 889

Query: 520  KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             ++   GL P+ + Y ++I+GL +    + AF +  +M +NG  P+   + SL+   C++
Sbjct: 890  HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 949

Query: 580  RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDF-KLNDFQLA 636
                 AF L+L+ +R  + + +    +  I  + ++ ++  A     EM F ++ +  L 
Sbjct: 950  GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-----EMLFERMKEQGLV 1004

Query: 637  P----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAM 690
            P    YT  + G C+ G   +A  +  ++        P +C    ++ GLCKRG  + A 
Sbjct: 1005 PNTNTYTTLIDGHCKAGNFSKAYELMELM--SNEGFFPNTCTYNSIVDGLCKRGRAEEAF 1062

Query: 691  DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV---HAYHLLCRMKSVGYDLDACLY 745
             +    L  GF  +    + +  ++L S+  K+     A   L +M  VG+  D  LY
Sbjct: 1063 KL----LNTGFQNQIEA-DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 1115


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 13/447 (2%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + AL SF +M      P    +  +L    + + +   L++  +M      P++ T ++L
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           IN      +   A  +L ++ + G  P+  T+  +I GLC   +  EA  LF K    G 
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V Y  L+NG CK+     A+ LLRS  +    P + +Y+ +ID L + ++  EA+ 
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M  + I PD+  Y  +I  L    + K    LL++M    I+P+   ++ ++   C
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G++  A  +   + KR   P+  T+T L+ G C    +D+A K+F+ M   GC P+V 
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 393

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI+G C+   ++KA  L  +M +           QG   + D  +  T++   C  
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSL-----------QG--LIADTVTYNTLIHGLCHV 440

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +  A  +  ++  SG +PD++TY  L++  CK  ++  A+ L K ++   L  D + Y
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 500

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNG 561
              I+G+ R    E A  +F  +   G
Sbjct: 501 NIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 199/427 (46%), Gaps = 15/427 (3%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F  L++   K+      L    +M  F   PDVY  N ++N     +    A +V  +++
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           KL C P+  TF+ LI GL   GK   A+ + D+    G  P+  TY  +++GLC++    
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A RL   M    C P+ +AYN +++  CK R+V EA  L       G  P + +Y+ LI
Sbjct: 235 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L     +        +M   KI P+VV++  ++  L + G +  A  ++  M +RG+ 
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   Y AL+ G C    +D+A  +   +  +  +PN  ++ ILI G C+   +D A  L
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             +M   G       +N LI GLC  G L+ A  LF++M                 ++ D
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM-------------VASGQIPD 461

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLF 519
             + + +++  C    + +A  +L++  E  NL  DI+ YN  I+G C+ G +  A  LF
Sbjct: 462 LVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520

Query: 520 KELQLKG 526
             L  +G
Sbjct: 521 SNLSCQG 527



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 203/451 (45%), Gaps = 20/451 (4%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
             N  D+A   F +M      P  V +  LL    K++     L+L    +  G  P + 
Sbjct: 89  HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 148

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           + + LI+     +R   A++   K+ +   +PD   +  +IRGL   GK+ +A+ L    
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G  PD   Y  L+ G C +G    A  L   + +++  PN   +  +I  +C++  V
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL 451
            +A  LF++M   G  P +  +N+LI  LC   E +    L  +M   +I  N  +F   
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF--- 325

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                         T+V+  C  G+I  A+ ++  + + G  PD++TY +L++G C    
Sbjct: 326 -------------STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 372

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ A+K+F  +  KG  P+  +Y  LING  ++ R + A  +  QM   G       Y +
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 432

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-EVENAIQGLLEMDFKL 630
           L+   C   +   A +L+ + +      D  + + + ++L K   +  A+  L  ++   
Sbjct: 433 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 492

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
            D  +  Y I + G+C+ G+++ A ++FS L
Sbjct: 493 LDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 144/306 (47%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           T+ + + K  N     R      ++    +  + + +I  L K       +    E+ + 
Sbjct: 222 TLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK 281

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            +S     +  LI     + + +       +M      P+V +++ V++   ++ +  +A
Sbjct: 282 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 341

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             V   M+K    P++VT++ L++G     + + A+K+ D M  +G +PN  +Y I+I+G
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 401

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            CQI R D+A  L  +M   G   D V YN L++G C + R+  A+AL       G +P 
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           L +Y  L+D L +     EA    + +    ++ D+++Y + I G+  AG+++ A  L S
Sbjct: 462 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 521

Query: 333 DMRERG 338
           ++  +G
Sbjct: 522 NLSCQG 527



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 162/389 (41%), Gaps = 18/389 (4%)

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           LD A S    +      P+T  FT L+  + +         L  +M+  G  P V   N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 419 LIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           LI+  C    L  A ++L   +++G  P              D  +  T++   C  G I
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQP--------------DNTTFNTLIRGLCVEGKI 198

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            +A  +  +    G  PD++TY +L+NG CKVGN + A++L + +  K  RP+ + Y T+
Sbjct: 199 GEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 258

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           I+ L +  +  +AF +F +M   G +P    Y SL+   C   ++    +L  + +    
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWLIGLCQDGQVKEALN 656
             +     ++ + L K  +      +++M  K   +  +  YT  + G C   ++ EA+ 
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL 716
           +F  +V    +    S   LI+G C+   +D AM +       G I      N L+  L 
Sbjct: 379 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438

Query: 717 FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
                +  HA  L   M + G   D   Y
Sbjct: 439 HV--GRLQHAIALFHEMVASGQIPDLVTY 465



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           S V+  L K     +    +D +    V      +  L+ G+    + ++A++ F  M  
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C P+V  YN ++N   + Q    A+ +  +M     + + VT++ LI+GL   G+ + 
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           AI +  EM   G +P+  TY I++  LC+ +   EA  L   ++ S    D + YN  ++
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505

Query: 247 GFCKLRRVDEALALLRSFEKDGF 269
           G C+   ++ A  L  +    GF
Sbjct: 506 GMCRAGELEAARDLFSNLSCQGF 528


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 216/463 (46%), Gaps = 33/463 (7%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P    YNA++    R+     A      MV+    P+  TF+ LI G  ++ + +VA  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D+M  RG   +  +Y  +I G C+  R DEA  LF +++     PD   + AL+ G C 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCD 242

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
            RR +E L +L+  ++ G+ P   +Y+ L+D   R ++ +EA     +MF+  + P  V 
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG-------LLDQAR 363
              ++      G++  A+++   M+ +G  P+ + YNA+++GFC++G       LLDQ R
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
              VE       P+  T+ +LI G C +G ++ A +L   ME  G       +N LID L
Sbjct: 363 ECGVE-------PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 424 CKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK G++++A  LF  +E  G  P              +  +  T++   C  G    A  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRP--------------NSVTFNTVINGLCKGGKFDVACT 461

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            L ++  +G  PD  TY+  I   CK       L    E+  K ++P +V Y  +I+ L 
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLF 521

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           +      A RI+GQM   GC+P    Y + +   C   +   A
Sbjct: 522 KERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 218/494 (44%), Gaps = 18/494 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P   T++ LI  L +      A + L  M + G  P+ FT+  +I G C+  + D A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM   G S D V+Y AL+ GFC+  RVDEAL L R  E+    P + +++ L+ GL  
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+R +E     +KM E    P    Y  ++       K ++A K+L++M + G+VP    
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
             A++  +C  G +  A  +   +  +   PN  T+  ++ G C  G V  A  L ++M 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
           + G  P V  +N LI G C  G +E A  L             LRL +G     D+ +  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRL-------------LRLMEGNGLAADQYTYN 409

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
            +++  C  G + +A  +   L   G  P+ +T+N++ING CK G  + A    +++   
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
           G  PD+ TY   I  L +     +      +M Q    PS   Y  ++    + R + LA
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA 529

Query: 586 FSLWLQYLRDISGRDDES-MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
             +W Q +      D  +   S+  +  +G +  A   ++EM           Y   + G
Sbjct: 530 TRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDG 589

Query: 645 LCQDGQVKEALNIF 658
               G+   A+ I 
Sbjct: 590 HTSIGKTDHAVTIL 603



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 274/635 (43%), Gaps = 47/635 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY +    + A + F KM       D   Y A++           AL ++ E+
Sbjct: 166 TFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL 225

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++ T + L+ GL  + + E  + ML +M + G  P    Y  ++   C+  +A
Sbjct: 226 EQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKA 281

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA ++  +M D+G  P  V   A++N +C+  R+  A+ +  S +  G  P + +Y+ +
Sbjct: 282 EEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAM 341

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G     +  +A A   +M E  +EPDVV Y ++IRG    G ++ A +LL  M   G+
Sbjct: 342 VQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D Y YN LI   C  G +D+A SL   +  R   PN+ TF  +I G+C+ G  D A  
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACT 461

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA-GELEKANLLFYKMEIGKNPT----------LF 448
              KM  AGC P    ++  I+ LCK  G  E  + +   ++    P+          LF
Sbjct: 462 FLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLF 521

Query: 449 LRLSQG------GNRVH-----DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
              + G      G  V      D  +  T V  YC  G +H+A  ++M++ + G + D +
Sbjct: 522 KERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAM 581

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE--------- 548
            YN+LI+G   +G  + A+ + K +      P+  T+  L+  L +    E         
Sbjct: 582 AYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSV 641

Query: 549 -------DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR--DISGR 599
                  D F +F  M +N    S   Y +++      R+     SL + +++  D+   
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSL-VSHMKEDDLPLN 700

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
           +D     +  F +     +A   L  M        L  Y   L G   +GQ   A  IF 
Sbjct: 701 EDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFR 760

Query: 660 VLVECKAIVTPPSCVK-LIHGLCKRGYLDLAMDVF 693
            L   K   T     K +I GL ++G+ D+  D+ 
Sbjct: 761 GL-RWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMI 794



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 223/493 (45%), Gaps = 37/493 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  ++ G+  VG   KA+    +M+E   +PDV  YN ++    R Q     +   + +
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLI----RGQCIDGHIESAFRL 392

Query: 160 VKL----NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           ++L        +  T+++LI+ L K+GK + A  + D +  RGI PN  T+  VI+GLC+
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             + D A     KM  +GC+PD   Y+  +   CK +   E L+ +    +    P   +
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ +ID LF+ + Y  A   + +M      PDVV Y   +R     G++ +A  ++ +M+
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           + GI+ D   YN LI G   +G  D A ++   +    S+PN  TF IL+  + +  + +
Sbjct: 573 KGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAE 632

Query: 396 DAQ----------------KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           D                  +LF  M+K     S   + A+++G  +   L++   L   M
Sbjct: 633 DVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHM 692

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           +    P              ++    ++V  +C   +   A+ +L  +   G LP++I+Y
Sbjct: 693 KEDDLPL-------------NEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISY 739

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             L++GF   G  + A ++F+ L+ K    D + +  +I+GL R    +    +   + Q
Sbjct: 740 QYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQ 799

Query: 560 NGCTPSPAVYKSL 572
             C PS   Y  L
Sbjct: 800 MKCKPSDETYAML 812



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 221/526 (42%), Gaps = 92/526 (17%)

Query: 224 RLFLKMKDSGC-SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           RLF  M   G  +P    YNAL+   C+   +  A   L    + G+ P   +++ LI G
Sbjct: 114 RLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R ++ D A   + KM       D V Y  +I G  E G+V +A++L  ++ +    PD
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PD 229

Query: 343 TYCYNALIKGFCD-------LGLLDQARSLQ-----------VEIWKRDS---------- 374
            Y + AL+KG CD       L +L + + L            V++W R+           
Sbjct: 230 MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLN 289

Query: 375 -------LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
                  +P   T T ++   CR G +  A ++F  M+  GC P+V  +NA++ G C  G
Sbjct: 290 EMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVG 349

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           ++ KA  L  +M E G  P              D  +   ++   C  G I  A+++L  
Sbjct: 350 KVYKAMALLDQMRECGVEP--------------DVVTYNLLIRGQCIDGHIESAFRLLRL 395

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +  +G   D  TYN LI+  CK G ++ A  LF  L+ +G+RP+SVT+ T+INGL +  +
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            + A     +M   GC P    Y   +   C+ +                     E +  
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG------------------SREGLSF 497

Query: 607 IEEFLQKGEVENAIQGLLEMD--FKLNDFQLA-----------------PYTIWLIGLCQ 647
           I+E LQK    + +   + +D  FK  ++ LA                  YT  +   C 
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCN 557

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           +G++ EA N+   + +   IV   +   LI G    G  D A+ + 
Sbjct: 558 EGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTIL 603



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/378 (21%), Positives = 155/378 (41%), Gaps = 16/378 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D      D L    +   S  F  +I+G  K G  + A     KM  
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD Y Y+  +    + +     L+   EM++ +  P+ V ++++I+ L K     +
Sbjct: 469 AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGL 528

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++  +M   G  P+  TYT  +   C   R  EA  + ++MK  G   D +AYN L++
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSY----------------SCLIDGLFRAKRYD 290
           G   + + D A+ +L+       +P   ++                      +++     
Sbjct: 589 GHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELA 648

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           + +  +  M +  +      Y  ++ G SE  ++ +   L+S M+E  +  +   Y +L+
Sbjct: 649 DVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLV 708

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC L +   A +L   +     LPN  ++  L+ G    G  D A+++F  +      
Sbjct: 709 NCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYN 768

Query: 411 PSVGMFNALIDGLCKAGE 428
               ++  +IDGL + G 
Sbjct: 769 TDEIVWKIIIDGLIRQGH 786



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 153/373 (41%), Gaps = 16/373 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+ L K   FD+    L+++ S   +  +  +   I    K     + L    +M +
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            D +P    Y  V++  F+++ + LA  ++ +MV L C P++VT++  +      G+   
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL- 245
           A  ++ EM + GI+ +   Y  +I G   I + D A  +   M      P+   +  LL 
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLR 623

Query: 246 ---------------NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                              K   + +   L    +K+       +Y  +++G    +R D
Sbjct: 624 HLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLD 683

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           E  +    M E+ +  +  +Y  ++    +     DA  LL  M   G +P+   Y  L+
Sbjct: 684 EVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLL 743

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            GF   G  D+A+ +   +  ++   +   + I+I G+ R G  D    + + +E+  C 
Sbjct: 744 SGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCK 803

Query: 411 PSVGMFNALIDGL 423
           PS   +  L + L
Sbjct: 804 PSDETYAMLTEEL 816



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/361 (21%), Positives = 142/361 (39%), Gaps = 51/361 (14%)

Query: 40  KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSD 99
           KTK  + G  F                                   +DE+   +V   + 
Sbjct: 487 KTKGSREGLSF-----------------------------------IDEMLQKDVKPSTV 511

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + ++I   +K  +   A   +G+M    C PDV  Y   +     +     A  V  EM
Sbjct: 512 NYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEM 571

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   + + + ++ LI+G +  GKT+ A+ +L  MT    +PN FT+ I++  L Q   A
Sbjct: 572 KKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLA 631

Query: 220 D----------------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           +                + + LF  MK +       AY A+L GF + RR+DE  +L+  
Sbjct: 632 EDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSH 691

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            ++D        Y+ L++   + + Y +A+A    M      P+++ Y  ++ G +  G+
Sbjct: 692 MKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQ 751

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
              A ++   +R +    D   +  +I G    G  D    +   + +    P+  T+ +
Sbjct: 752 ADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAM 811

Query: 384 L 384
           L
Sbjct: 812 L 812



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 116/304 (38%), Gaps = 38/304 (12%)

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           LF  +   G      A+   ++   C    +  A + L  +  SG  PD  T+NSLI G+
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+   ++ A  LF ++ L+G   D+V+Y  LI G     R ++A  +F ++ Q       
Sbjct: 175 CRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHA 234

Query: 567 AVYKSL------------------MTWSCRRRKFSLAFSLWLQYLRDISGRDDESM---- 604
           A+ K L                  + W    R ++    LW    R+    + E M    
Sbjct: 235 ALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLW---CREQKAEEAEKMLNEM 291

Query: 605 -------------KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                          +  + ++G +  A++    M  K  +  +  Y   + G C  G+V
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKV 351

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
            +A+ +   + EC       +   LI G C  G+++ A  +      NG        N L
Sbjct: 352 YKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVL 411

Query: 712 LRSL 715
           + +L
Sbjct: 412 IDAL 415


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 233/519 (44%), Gaps = 59/519 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS L +    +L W  LD L             ++++G      C   L   GK +E
Sbjct: 121 TQLISKLCRSGNTNLAWNILDNL-------------MMLNGLKDAAPCNALLTGLGKARE 167

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F            +N+  RK            M  +N  P ++TF +LIN L K  + + 
Sbjct: 168 F----------GKMNLLMRK------------MKDMNIQPTVITFGILINHLCKFRRIDD 205

Query: 187 AIKMLDEM------TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
           A+++ ++M      T+  + P+   Y  +I GLC++ R +EA  L  KM+   C+P    
Sbjct: 206 ALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTAT 265

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           +N L+NG+C+   ++ A  L    E     P + + + L+DG+ +  R   A  ++R M 
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQ 325

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           ++ ++ + V Y V I        +  AM+ L +M + G  PD   Y  LI G    G LD
Sbjct: 326 QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLD 385

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A S+  ++ +     +   + +LI   C+   +D AQ+  N+ME AG  P    +N LI
Sbjct: 386 DASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLI 445

Query: 421 DGLCKAGELEKANLLFYKM--EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
               K G  + A+    KM  E G +PT+F              +   ++  YC    I 
Sbjct: 446 SYFSKIGNFKLAHKFMKKMTEEEGLSPTVF--------------TYGALIHAYCLNNNID 491

Query: 479 KAYKILMQL--AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +A KI  ++    S   P+ + YN LI+  CK   +N AL L  +++ +G+ P++ TY +
Sbjct: 492 EAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNS 551

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           +   L+  +  + AF++  +M +  C P     + L  W
Sbjct: 552 IFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEW 590



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 208/437 (47%), Gaps = 22/437 (5%)

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           K N  P+ +  + LI+ L +SG T +A  +LD +     L +      +++GL +     
Sbjct: 110 KHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFG 169

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-----EKDGFV-PRLG 274
           +   L  KMKD    P  + +  L+N  CK RR+D+AL +         E   FV P   
Sbjct: 170 KMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTI 229

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
            Y+ LIDGL +  R +EA     KM  ++  P    +  +I G   +G+++ A KL ++M
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEM 289

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
               I P+    N L+ G C    +  A      + ++    N  T+T+ I   C    +
Sbjct: 290 ENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNM 349

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQG 454
           + A +  ++M K GCFP   ++  LI GL +AG L+ A+            ++  +L + 
Sbjct: 350 NKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDAS------------SVVSKLKEA 397

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
           G    D+     ++ ++C    + +A + L ++  +G  PD +TYN+LI+ F K+GN   
Sbjct: 398 G-FCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456

Query: 515 ALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ--NGCTPSPAVYKS 571
           A K  K++ + +GL P   TYG LI+     +  ++A +IF +M    +   P+  +Y  
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516

Query: 572 LMTWSCRRRKFSLAFSL 588
           L+   C++ + + A SL
Sbjct: 517 LIDSLCKQTQVNFALSL 533



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 208/463 (44%), Gaps = 24/463 (5%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALE 119
           L+  A  +A+++ L K   F      + +++  N+      F +LI+   K    + ALE
Sbjct: 149 LKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALE 208

Query: 120 SFGKMK------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
            F KMK      +    PD  +YN +++   +      AL +  +M    C P   TF+ 
Sbjct: 209 VFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNC 268

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           LING  +SG+ EVA K+ +EM    I PN  T   ++ G+C+ NR   A   F  M+  G
Sbjct: 269 LINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKG 328

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
              + V Y   +N FC +  +++A+  L    KDG  P    Y  LI GL +A R D+A 
Sbjct: 329 LKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDAS 388

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
           +   K+ E     D V Y V+I    +  K+  A + L++M   G+ PD+  YN LI  F
Sbjct: 389 SVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYF 448

Query: 354 CDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF-- 410
             +G    A     ++ + + L P   T+  LI   C N  +D+A K+F +M        
Sbjct: 449 SKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVP 508

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P+  ++N LID LCK  ++  A  L   M+  G  P              +  +  ++ +
Sbjct: 509 PNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMP--------------NTTTYNSIFK 554

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
                  + KA+K++ ++ E    PD IT   L      VG I
Sbjct: 555 ALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEI 597



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 3/349 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           + ++RS   +  +  F  LI+GY + G+ E A + F +M+    +P+V   N +++   +
Sbjct: 251 MGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCK 310

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 A+  +  M +     N VT+++ IN          A++ LDEM++ G  P+   
Sbjct: 311 HNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVV 370

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I GL Q  R D+A  +  K+K++G   D V YN L++ FCK  ++D A   L   E
Sbjct: 371 YYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEME 430

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEAGKV 324
             G  P   +Y+ LI    +   +  A+ + +KM EE+ + P V  YG +I        +
Sbjct: 431 LAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNI 490

Query: 325 KDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +A+K+  +M      + P+T  YN LI   C    ++ A SL  ++  R  +PNT T+ 
Sbjct: 491 DEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYN 550

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
            +   +     +D A KL ++M +  C P       L + L   GE+ K
Sbjct: 551 SIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITK 599



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 227/536 (42%), Gaps = 72/536 (13%)

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS--FEKDGFV 270
           L +I   DEA   F  +     + +    N ++N   K  RVD A+ +L      +  F 
Sbjct: 16  LGRIGMVDEALAAFSTLDSHAKNTN--VRNEIINLLLKSGRVDNAMNVLDEMLLPESEFR 73

Query: 271 PRLGSYSCL------IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           P   +   +      IDGL    + DE      K  +  I PD +    +I  L  +G  
Sbjct: 74  PNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNT 133

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
             A  +L ++     + D    NAL+ G        +   L  ++   +  P   TF IL
Sbjct: 134 NLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGIL 193

Query: 385 ICGMCRNGMVDDAQKLFNKM----EKAGCF--PSVGMFNALIDGLCKAGELEKANLLFYK 438
           I  +C+   +DDA ++F KM    E+   F  P   M+N LIDGLCK G  E+A  L  K
Sbjct: 194 INHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGK 253

Query: 439 MEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           M   +  PT               A+   ++  YC +G I  A+K+  ++  +   P++I
Sbjct: 254 MRSDQCAPT--------------TATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVI 299

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           T N+L++G CK   I+ A++ F+ +Q KGL+ ++VTY   IN    V+    A     +M
Sbjct: 300 TLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM 359

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGE 615
            ++GC P   VY +L+    +  +   A S+ +  L++     D    +  I EF +K +
Sbjct: 360 SKDGCFPDAVVYYTLICGLAQAGRLDDASSV-VSKLKEAGFCLDRVCYNVLISEFCKKNK 418

Query: 616 VENAIQGLLEMDF------------------KLNDFQLA------------------PYT 639
           ++ A + L EM+                   K+ +F+LA                   Y 
Sbjct: 419 LDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYG 478

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVF 693
             +   C +  + EA+ IF  +    + V P + +   LI  LCK+  ++ A+ + 
Sbjct: 479 ALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLL 534



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 59/332 (17%)

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
           SL    +   L+  + R GMVD+A   F+ ++      +  + N +I+ L K+G ++ A 
Sbjct: 2   SLSTAQSSVHLLRRLGRIGMVDEALAAFSTLDSHA--KNTNVRNEIINLLLKSGRVDNAM 59

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKAS------------LQTMVEQYCTAGLIHKAY 481
            +  +M           L +   R +DK +            L+  V++   AGL+ K  
Sbjct: 60  NVLDEM----------LLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSK-- 107

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
                  +    PD I    LI+  C+ GN N A  +   L +     D+     L+ GL
Sbjct: 108 -----FGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGL 162

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +         +  +M      P+   +  L+   C+ R+   A  ++            
Sbjct: 163 GKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVF------------ 210

Query: 602 ESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVL 661
           E MK  +E  +     + I                 Y   + GLC+ G+ +EAL +   +
Sbjct: 211 EKMKGEKEETKVFVAPDTIM----------------YNTLIDGLCKVGRQEEALCLMGKM 254

Query: 662 VECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              +   T  +   LI+G C+ G +++A  +F
Sbjct: 255 RSDQCAPTTATFNCLINGYCRSGEIEVAHKLF 286


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 264/589 (44%), Gaps = 36/589 (6%)

Query: 112 GDCEKALESFGKMKEFDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
           G  + A + FG+M++     PDV+ Y A++    R      A A+  E+ +    P +VT
Sbjct: 189 GQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVT 248

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
           +++L++ L KSG+ E A ++   M +  + P+  T+ I+ISGL +  +  E   +  +M+
Sbjct: 249 YNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQ 308

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
             G +P+ V YN ++   C+     EAL L       G    + +Y+ +   L +    +
Sbjct: 309 GFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 368

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIR----------GLSEAGKVKDAMKLLSDMRERGIV 340
            A         EKI  +++L G+M+            L   G++   ++L+ +M  R + 
Sbjct: 369 HA---------EKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLK 419

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+     A I+  C  G  ++A  +  ++  +    N  T   LI G+C+   + +A K+
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
              M  +G       +N +I G CKA ++++A  L   M + G  P LF           
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLF----------- 528

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +    +  YC  G + +   +L Q+   G  PDI+TY ++I+G+CK  +++ A +  
Sbjct: 529 ---TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYL 585

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            EL   GLRP++V Y  LI G  R     DA  I   M  NG  P+P  Y SLM W C  
Sbjct: 586 TELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHA 645

Query: 580 RKFSLAFSLWLQ-YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                  +++ Q  ++DI          I+ F + G+++ A+    EM  +        Y
Sbjct: 646 GLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTY 705

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           T  +    + G  +EA  +F  +V    +    S   LI G C+   LD
Sbjct: 706 TTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLD 754



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 250/588 (42%), Gaps = 61/588 (10%)

Query: 51  FIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGY 108
           F+  + R    S  + S ++  L      D+  +   E+R G  +V  DV  +  +I   
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-TVAPDVHTYTAMIKAL 221

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
            + G+ + A     +++    QP V  YN +++   +      A  +   MV+    P+I
Sbjct: 222 CRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSI 281

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VTF +LI+GL++  +      +L EM   GI PN+  Y  +I   C+     EA +LF +
Sbjct: 282 VTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDE 341

Query: 229 MKDSGCSPDFVAYNALLNGFCK---------------------------------LR--- 252
           M   G     V YN +    CK                                 LR   
Sbjct: 342 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTG 401

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           R+D  L L+R        P     +  I  L ++ +++EA   + ++  + +  +V    
Sbjct: 402 RLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSN 461

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            +I GL +   +K+A K+L  M   G+  D   YN +I+G C    +D+A  L+ ++ KR
Sbjct: 462 ALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR 521

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+  TF I +   C  G V++   L ++M+  G  P +  +  +IDG CKA ++ KA
Sbjct: 522 GFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKA 581

Query: 433 N-LLFYKMEIGKNP------TLFLRLSQGGNRVHDKASLQTM---------------VEQ 470
           N  L   M+ G  P       L     + GN       L TM               +  
Sbjct: 582 NEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYW 641

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C AGL+ +   +  Q         +I Y  +I GFCK+G I+ A+  FKE+  +G+ P+
Sbjct: 642 MCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPN 701

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +TY TL+    +   +E+A ++F +M   G  P    Y +L++  C 
Sbjct: 702 KMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 220/500 (44%), Gaps = 58/500 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F +LISG  +     +      +M+ F   P+  IYN ++    RK     AL ++ EM
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL------------------- 200
           V       +VT++L+   L K G+ E A K+LDEM   G++                   
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGR 402

Query: 201 -----------------PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNA 243
                            PN    T  I  LC+  + +EA  ++ ++   G   +    NA
Sbjct: 403 LDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNA 462

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           L++G C+   + EA  +L++    G      +Y+ +I G  +A + DEA      M +  
Sbjct: 463 LIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG 522

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
            +PD+  + + +      GKV++ + LL  M+  G+ PD   Y  +I G+C    + +A 
Sbjct: 523 FKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKAN 582

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
               E+ K    PN   +  LI G  RNG + DA  + + M+  G  P+   +N+L+  +
Sbjct: 583 EYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWM 642

Query: 424 CKAGELEKANLLFYKM--------------------EIGK--NPTLFLRLSQGGNRVHDK 461
           C AG +E+   +F +                     +IGK     ++ +         +K
Sbjct: 643 CHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNK 702

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T++  Y  +G   +A K+  ++   G +PD ++YN+LI+GFC+V +++  ++   E
Sbjct: 703 MTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAE 762

Query: 522 LQLKGLRPDSVTYGTLINGL 541
           +  + L+ D  +Y   ++G+
Sbjct: 763 MSSQVLKQDGCSYNAFVDGI 782



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 180/415 (43%), Gaps = 29/415 (6%)

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF-PSVGM 415
           G L +A    +E+  R + P+  T +IL+  +   G +D A+K+F +M       P V  
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPT------LFLRLSQGGNRVHDKASLQ-TM 467
           + A+I  LC+AGE++ A  +  ++   G  PT      L   L + G RV +   L+  M
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSG-RVEEAFRLKGRM 272

Query: 468 VE-----QYCTAGLIHKAYKILMQLAESGNL----------PDIITYNSLINGFCKVGNI 512
           VE        T G++        Q  E G +          P+ + YN +I   C+ G+ 
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + ALKLF E+  KG++   VTY  +   L +    E A +I  +M   G     +++ S+
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392

Query: 573 MTWSCR-RRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKL 630
           + W  R   +  L   L  + L      +D  M + I+E  + G+ E A +   ++  K 
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               +A     + GLCQ   +KEA  +   +V     +   +   +I G CK   +D A+
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
            +    +K GF  +P +  + +    +    K     HLL +MKS G   D   Y
Sbjct: 513 QLRDDMIKRGF--KPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTY 565



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 35/264 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F + +  Y  +G  E+ L    +MK    +PD+  Y  +++   + +    A     E+
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY------------- 206
           +K    PN V ++ LI G  ++G    AI +LD M   GI P   TY             
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLV 648

Query: 207 ----------------------TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
                                 TI+I G C+I + DEA   F +M   G  P+ + Y  L
Sbjct: 649 EEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +  + K    +EA  L       G VP   SY+ LI G       D+      +M  + +
Sbjct: 709 MFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAM 328
           + D   Y   + G++     K+A+
Sbjct: 769 KQDGCSYNAFVDGITTPWCQKEAV 792


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 257/555 (46%), Gaps = 30/555 (5%)

Query: 33  TVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           +  +++   +   V   FF WA    + R F     V +M L              +   
Sbjct: 123 SAVALLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSL--------------VGKC 168

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           N+    +V   ++  + ++G  ++A++    M+         + N ++ +A   +L   A
Sbjct: 169 NLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYA 228

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             V+ EM      P+  T+  +I G  ++G    A + + EM +RG + +  T T++I+ 
Sbjct: 229 GNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITA 288

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
            C+ +  + A   F K+   G SP+ + Y+++++G CK   V +A  LL    K+G+ P 
Sbjct: 289 FCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPN 348

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
           + +++ LI GL +    + A+  + K+   +  +P+V  Y  MI G  +  K+  A  L 
Sbjct: 349 VYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 408

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M+E+G+VP+T  Y  LI G C  G   +A  L   +      PNT T+  ++ G+C+ 
Sbjct: 409 ERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKR 468

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLR 450
           G  ++A KL N   +         +  LI   CK  ++ +A +   KM ++G  P + L 
Sbjct: 469 GRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL- 527

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                          T++  +C   ++  + K+  ++ + G  P   TY S+I G+C+  
Sbjct: 528 -------------YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREK 574

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            ++ A+K F+++   G  PDS++YG LI+GL +  R ++A +++  M   G +P      
Sbjct: 575 KVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV 634

Query: 571 SLMTWSCRRRKFSLA 585
           +L    C+   F+ A
Sbjct: 635 TLTYEYCKTEDFASA 649



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 18/408 (4%)

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           E A  + DEM+ RG+ P+  TY  +I G C+     EA R   +M + G   D      +
Sbjct: 226 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLI 285

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           +  FC+   V+ A+       K G  P L +YS +I GL +     +A+    +M +   
Sbjct: 286 ITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGW 345

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKL-LSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           +P+V  +  +I GL + G  + A +L L  +R     P+ + Y A+I G+C    L +A 
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 405

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            L   + ++  +PNT+T+T LI G C+ G    A +L   M   G FP+   +N+++DGL
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQG-GNRVH-DKASLQTMVEQYCTAGLIHKAY 481
           CK G  E+A               F  L+ G  N++  D  +   ++ + C    +++A 
Sbjct: 466 CKRGRAEEA---------------FKLLNTGFQNQIEADGVTYTILISEQCKRADMNQAL 510

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
             L ++ + G  PDI  Y +LI  FC+   +  + KLF E+   GL P   TY ++I G 
Sbjct: 511 VFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGY 570

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            R  +   A + F +M  +GC P    Y +L++  C+  +   A  L+
Sbjct: 571 CREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLY 618



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 216/485 (44%), Gaps = 54/485 (11%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            DE+ +  V   S  +  +I GY + G+  +A     +M E     D      ++     
Sbjct: 232 FDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCE 291

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           K L   A+  ++++ K+   PN++ +S +I+GL K G  + A ++L+EM + G  PN +T
Sbjct: 292 KSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYT 351

Query: 206 YTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           +T +I GLC+    + A+RLFLK+ +     P+   Y A+++G+CK  ++  A  L    
Sbjct: 352 HTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM 411

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
           ++ G VP   +Y+ LIDG  +A  + +AY     M  E   P+   Y  ++ GL + G+ 
Sbjct: 412 KEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 471

Query: 325 KDAMKLL-------------------------SDMRER----------GIVPDTYCYNAL 349
           ++A KLL                         +DM +           G  PD + Y  L
Sbjct: 472 EEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 531

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I  FC   ++  +  L  E+ K    P   T+T +ICG CR   V  A K F KM   GC
Sbjct: 532 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGC 591

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P    + ALI GLCK   L++A  L+  M + G +P    R+              T+ 
Sbjct: 592 APDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRV--------------TLT 637

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
            +YC       A  IL +L +      I T ++LI   C    +  A   F +L  K + 
Sbjct: 638 YEYCKTEDFASAMVILERLNKK---LWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVN 694

Query: 529 PDSVT 533
            D VT
Sbjct: 695 VDRVT 699



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 114/238 (47%), Gaps = 7/238 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +LIS   K  D  +AL    KM +   QPD+++Y  ++    R+ +   +  ++ E+
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +KL   P   T++ +I G  +  K  +A+K   +M+  G  P+  +Y  +ISGLC+ +R 
Sbjct: 552 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 611

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA +L+  M D G SP  V    L   +CK      A+ +L    K  ++  + +   L
Sbjct: 612 DEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---L 668

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           I  L   K+   A  ++ K+ ++++  D V          E+ K      L+SD+ ER
Sbjct: 669 IRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKY----ALVSDLSER 722



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 24/298 (8%)

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           D  + + ++  YC  G + +A + + ++ E G + D  T   +I  FC+   +N A+  F
Sbjct: 243 DSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFF 302

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            ++   GL P+ + Y ++I+GL +    + AF +  +M +NG  P+   + SL+   C++
Sbjct: 303 HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 362

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDF-KLNDFQLA 636
                AF L+L+ +R  + + +    +  I  + ++ ++  A     EM F ++ +  L 
Sbjct: 363 GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRA-----EMLFERMKEQGLV 417

Query: 637 P----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAM 690
           P    YT  + G C+ G   +A  +  ++        P +C    ++ GLCKRG  + A 
Sbjct: 418 PNTNTYTTLIDGHCKAGNFSKAYELMELM--SNEGFFPNTCTYNSIVDGLCKRGRAEEAF 475

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV---HAYHLLCRMKSVGYDLDACLY 745
            +    L  GF  +    + +  ++L S+  K+     A   L +M  VG+  D  LY
Sbjct: 476 KL----LNTGFQNQIEA-DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLY 528


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 228/477 (47%), Gaps = 22/477 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y   GD   A +    +      PD Y Y + +    R  +   A  V+  M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               CL    T++ L++GL  +G    A+ +   M      P+   Y  ++ GLC+  R 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA  L  +   +G  P+ V YNAL++G+C    ++ AL +    + +   P + +Y+ L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I GL ++ + + A   + +M E  +EP+VV Y  +I+G    G ++ A +LL  M   G+
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP+ + ++ LI   C    +++A+     + K+    N   +T LI G+C+ G +D A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKNPTLFLRL----- 451
           L  KM   G  P    +++LIDGLC+  +L +A L+   M    I  +P  +  +     
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 452 ----SQGGNRVHDK----------ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
               S+G  ++ DK           +    V  YC  G +  A  +++Q+ + G  P+++
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
           TYN+LI G+  +G ++ A   F+ +  KG +P+  +Y  L+  + +    +++  I+
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 216/473 (45%), Gaps = 14/473 (2%)

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
           ++ +  R    N  TYT +I+  C       A +    +  +G +PD  AY + + G+C+
Sbjct: 60  MESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCR 119

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
              +  A  +       G +    +Y+ L+ GL  A    EA A +  M  +   PD  +
Sbjct: 120 AGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHV 179

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  M+ GL EAG+ ++A  LL +    G  P+   YNALI G+C+ G ++ A  +   + 
Sbjct: 180 YATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMD 239

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
                PN  T+T LI G+C++G V+ A  LF++M +AG  P+V  + ALI G C  G L+
Sbjct: 240 GNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
            A  L + ME                 V +  +   +++  C    + +A   L  L + 
Sbjct: 300 CAFRLLHLMET-------------NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKK 346

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           G   + + Y SLI+G CK G I+ A +L +++  +G  PD+ +Y +LI+GL R  +   A
Sbjct: 347 GVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA 406

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEE 609
             +   M + G   SP  Y  ++    R         ++ + +      D  +    +  
Sbjct: 407 TLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           + ++G +E+A   +++M  +     L  Y   + G    G V +A + F V+V
Sbjct: 467 YCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 170/377 (45%), Gaps = 24/377 (6%)

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI  +C  G +  A+     +      P+++ +T  + G CR GM+  A ++F  M 
Sbjct: 75  YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             GC  +   + AL+ GL  AG + +A  +F  M             +  +   D     
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGM-------------RADSCAPDTHVYA 181

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           TMV   C AG   +A  +L +   +G  P+I+ YN+LI+G+C  G +  ALK+F+ +   
Sbjct: 182 TMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGN 241

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
              P+  TY  LI+GL +  + E A  +F +M + G  P+   Y +L+   C       A
Sbjct: 242 RCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCA 301

Query: 586 FSLWLQYLRDISG--RDDESMKS-IEEFLQKGEVENA---IQGLLEMDFKLNDFQLAPYT 639
           F L   +L + +G   +D +    I+   ++ +VE A   +  L++   K+N+     YT
Sbjct: 302 FRLL--HLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV---YT 356

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + GLC+ G++  A  +   ++    +    S   LI GLC++  L  A  +    ++ 
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 700 GFILRPRVCNYLLRSLL 716
           G    P     ++  L+
Sbjct: 417 GIQASPVTYTIIIDELV 433



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 147/325 (45%), Gaps = 37/325 (11%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F VLI    K    E+A    G + +   + +  +Y ++++   +      A  +  +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +    +P+  ++S LI+GL +  K   A  ML++M ++GI  +  TYTI+I  L +   +
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +   ++F KM  +G +PD V Y   +  +C+  R+++A +++      G  P L +Y+ L
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL--LSDMRER 337
           I G        +A++ +  M  +  +P+   Y V++R + +     +++ +  ++DM+  
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMK-- 556

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
                            DL    Q  +    +WK           ILI G+ + G V + 
Sbjct: 557 -----------------DL----QESNYDEIVWK-----------ILIYGLLQKGSVAEF 584

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDG 422
             L + M++ G  PS    NA+I G
Sbjct: 585 SSLLSVMKEHGYQPS-NTINAMITG 608


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/631 (24%), Positives = 279/631 (44%), Gaps = 78/631 (12%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           +KA++   + +     PDV   N + N          ALAVY ++ +   +PN  T++++
Sbjct: 177 DKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIV 236

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I  L K G  +  + + +EM + G++P+ + +   I GLC  +R+D  Y +    +    
Sbjct: 237 IKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNA 296

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
             +  AY A++ GFC   ++DEA  +    E+ G VP +  YS LI G  ++     A A
Sbjct: 297 PLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALA 356

Query: 295 WYRKMFEEKIEP-----------------------------------DVVLYGVMIRGLS 319
            + +M    ++                                    D V Y ++   L 
Sbjct: 357 LHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALC 416

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
             GKV+DA++++ +M+ + +  D   Y  LI G+C  G L  A ++  E+ ++   P+  
Sbjct: 417 MLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIV 476

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+ +L  G+ RNG   +  KL + ME  G  P+      +I+GLC  G++ +A + F  +
Sbjct: 477 TYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSL 536

Query: 440 E-------------------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           E                   + K+  +FL+L   G+    KAS   ++ + C  G I KA
Sbjct: 537 EDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMA-KKASCFKLLSKLCMTGDIEKA 595

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            K+L ++  S   P  I Y+ ++   C+ G++  A  LF     +G  PD VTY  +IN 
Sbjct: 596 VKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINS 655

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL-RDISGR 599
             R++  ++A  +F  M + G  P    +  L+  S +            +YL +  S  
Sbjct: 656 YCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLK------------EYLGKRFSSH 703

Query: 600 DDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFS 659
                 S+        V   ++ + +M  K+N   +  YT+ + G  +    ++A+++F 
Sbjct: 704 GKRKTTSL-------YVSTILRDMEQM--KINP-DVVCYTVLMDGHMKTDNFQQAVSLFD 753

Query: 660 VLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
            ++E        +   L+ GLC RG+++ A+
Sbjct: 754 KMIESGLEPDTITYTALVSGLCNRGHVEKAV 784



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/536 (22%), Positives = 245/536 (45%), Gaps = 32/536 (5%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A I  L   +  DL ++ L   R GN  +    +  ++ G+      ++A   F  M+ 
Sbjct: 269 AAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMER 328

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDVY+Y+++++   +    L ALA++ EM+      N V  S +++ L + G T  
Sbjct: 329 QGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLE 388

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            +    E+ + G+  +   Y IV   LC + + ++A  +  +MK      D   Y  L+N
Sbjct: 389 VVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLIN 448

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C    +  A  + +  ++ G  P + +Y+ L  GL R     E       M  + ++P
Sbjct: 449 GYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKP 508

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +   + ++I GL   GKV +A    + + ++ I      Y+A++ G+C+  L+ ++  + 
Sbjct: 509 NSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI----EIYSAMVNGYCETDLVKKSYEVF 564

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           +++  +  +    +   L+  +C  G ++ A KL ++M  +   PS  M++ ++  LC+A
Sbjct: 565 LKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQA 624

Query: 427 GELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G+++ A  LF   +  G  P              D  +   M+  YC    + +A+ +  
Sbjct: 625 GDMKNARTLFDVFVHRGFTP--------------DVVTYTIMINSYCRMNCLQEAHDLFQ 670

Query: 486 QLAESGNLPDIITYNSLINGFCK--VG---NINGALK--------LFKELQLKGLRPDSV 532
            +   G  PD+IT+  L++G  K  +G   + +G  K        + ++++   + PD V
Sbjct: 671 DMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVV 730

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            Y  L++G  + D  + A  +F +M ++G  P    Y +L++  C R     A +L
Sbjct: 731 CYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTL 786



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 224/527 (42%), Gaps = 60/527 (11%)

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           A+N  +     L   D+A+  L    + G +P + + + L + L      D+A A Y ++
Sbjct: 162 AFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQL 221

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                 P+   Y ++I+ L + G +K  + +  +M   G++P +YC+ A I+G C+    
Sbjct: 222 KRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRS 281

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
           D    +     K ++    + +T ++ G C    +D+AQ +F+ ME+ G  P V ++++L
Sbjct: 282 DLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSL 341

Query: 420 IDGLCKAGELEKANLLFYKM--------------------EIGKNPTL---FLRLSQGGN 456
           I G CK+  L +A  L  +M                    E+G    +   F  L + G 
Sbjct: 342 IHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGM 401

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
            + D  +   + +  C  G +  A +++ ++       D+  Y +LING+C  G++  A 
Sbjct: 402 FL-DGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAF 460

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
            +FKE++ KGL+PD VTY  L  GL R     +  ++   M   G  P+   +K ++   
Sbjct: 461 NMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGL 520

Query: 577 CRRRKFSLAFSLWLQYLRD---------ISG--RDDESMKSIEEFLQ------------- 612
           C   K  L   ++   L D         ++G    D   KS E FL+             
Sbjct: 521 CSGGKV-LEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASC 579

Query: 613 ---------KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                     G++E A++ L  M     +     Y+  L  LCQ G +K A  +F V V 
Sbjct: 580 FKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVH 639

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
                   +   +I+  C+   L  A D+F    + G  ++P V  +
Sbjct: 640 RGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRG--IKPDVITF 684



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 187/453 (41%), Gaps = 83/453 (18%)

Query: 61  RSFASNSAVISMLLKPNG-FDLYWQTLD---ELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
           R   +N  V+S +L   G   +  + +D   EL+   + +    + ++      +G  E 
Sbjct: 364 RGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVED 423

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
           A+E   +MK      DV  Y  ++N    +   + A  ++ EM +    P+IVT+++L  
Sbjct: 424 AVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAA 483

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFT------------------------------- 205
           GLS++G     +K+LD M  +G+ PN  T                               
Sbjct: 484 GLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEI 543

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSG-------------------------------- 233
           Y+ +++G C+ +   ++Y +FLK+ + G                                
Sbjct: 544 YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRML 603

Query: 234 ---CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                P  + Y+ +L   C+   +  A  L   F   GF P + +Y+ +I+   R     
Sbjct: 604 LSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQ 663

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRG---------LSEAGKVKDAM----KLLSDMRER 337
           EA+  ++ M    I+PDV+ + V++ G          S  GK K        +L DM + 
Sbjct: 664 EAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQM 723

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I PD  CY  L+ G        QA SL  ++ +    P+T T+T L+ G+C  G V+ A
Sbjct: 724 KINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKA 783

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             L N+M   G  P V + +AL  G+ KA +++
Sbjct: 784 VTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/558 (25%), Positives = 247/558 (44%), Gaps = 33/558 (5%)

Query: 26  LPFLSKTTVTSVIMKTKN---PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLY 82
           + FL+     SV+    +     V   FF WA    + R F     V +M L  N     
Sbjct: 74  VDFLTHEQAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMSLIGNR---- 129

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
                     N     +V   ++  + +VG  ++A+E   +M      P+    N ++ +
Sbjct: 130 ----------NSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKV 179

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
                L   A  ++ EM      P+ +++ +++    K G    A K L  M +RG + +
Sbjct: 180 TSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVD 239

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             T+T++IS          A   F ++ D G  P+ + +  ++ G CK   + +A  +L 
Sbjct: 240 NATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLE 299

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEA 321
                G+ P + +++ LIDGL +    ++A+  + K+   E  +P+V+ Y  MI G    
Sbjct: 300 EMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRE 359

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
            K+  A  LLS M+E+G+VP+T  Y  LI G C  G  ++A  L   +      PN  T+
Sbjct: 360 DKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTY 419

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-E 440
             ++ G+C+ G V +A K+     + G  P    +N L+   CK   + +A  LF KM +
Sbjct: 420 NAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLK 479

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
           IG  P              D  S  T++  +C    + ++     +    G +P   TY 
Sbjct: 480 IGIQP--------------DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYT 525

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
           S+I G+C+ GN+  A+K F  L   G  PDS+TYG +I+GL +  + ++A  ++  M + 
Sbjct: 526 SMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585

Query: 561 GCTPSPAVYKSLMTWSCR 578
           G  P      +L    C+
Sbjct: 586 GLVPCEVTRITLAYEYCK 603



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 243/516 (47%), Gaps = 60/516 (11%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++   S+ G+ + A++M+ EM  +G++PN  T   +I    ++   + A  LF +M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD ++Y  ++  +CK+  + EA   L    + GFV    +++ LI   F  K Y    
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFT-LIISRFSGKGYTTRA 259

Query: 294 AWY-RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
            WY R++ +  +EP+++ +  MI GL + G +K A ++L +M  +G  P+ Y + +LI G
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319

Query: 353 FCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            C  G  ++A  L +++ + ++  PN  T+T +I G CR   ++ A+ L ++M++ G  P
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 412 SVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           +   +  LIDG CKAG  E+A +L+      G +P L               +   +V  
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNL--------------CTYNAIVNG 425

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G + +AYK+L    ++G  PD  TYN L++  CK  NI  AL LF ++   G++PD
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
             +Y TLI    R +R +++   F +  + G  P+   Y S++   CR    +LA   + 
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFF- 544

Query: 591 QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLC 646
                                                 +L+D   AP    Y   + GLC
Sbjct: 545 -------------------------------------HRLSDHGCAPDSITYGAIISGLC 567

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           +  +  EA +++  ++E   +    + + L +  CK
Sbjct: 568 KQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 196/450 (43%), Gaps = 46/450 (10%)

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           ++  F ++ R+ EA+ ++      G VP   + + +I         + A   + +M    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++PD + Y VM+    + G + +A K LS M ERG V D   +  +I  F   G   +A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
                +      PN   FT +I G+C+ G +  A ++  +M   G  P+V    +LIDGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           CK G  EKA              LFL+L +  N   +  +   M+  YC    +++A  +
Sbjct: 321 CKKGWTEKA------------FRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 368

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++ E G +P+  TY +LI+G CK GN   A  L   +  +G  P+  TY  ++NGL +
Sbjct: 369 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 428

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
             R ++A+++     QNG  P    Y  LM+  C++     A +L+ + L+ I  + D  
Sbjct: 429 RGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLK-IGIQPD-- 485

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                                          +  YT  +   C++ ++KE+   F   V 
Sbjct: 486 -------------------------------IHSYTTLIAVFCRENRMKESEMFFEEAVR 514

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              I T  +   +I G C+ G L LAM  F
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFF 544



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 171/396 (43%), Gaps = 54/396 (13%)

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           +++ F ++G L +A  + +E+  +  +PNT T   +I      G+V+ A+ LF +M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             P    +  ++   CK G + +A+             L + L +G   V D A+   ++
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEAD-----------KWLSVMLERGF--VVDNATFTLII 247

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
            ++   G   +A     +L + G  P++I +  +I G CK G+I  A ++ +E+  KG +
Sbjct: 248 SRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWK 307

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           P+  T+ +LI+GL +    E AFR+F ++ ++    P+   Y ++++  CR  K + A  
Sbjct: 308 PNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEM 367

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
           L                  +    ++G V N                   YT  + G C+
Sbjct: 368 L------------------LSRMKEQGLVPNT----------------NTYTTLIDGHCK 393

Query: 648 DGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            G  + A ++ +++       +P  C    +++GLCKRG +  A  +     +NG  L+P
Sbjct: 394 AGNFERAYDLMNLM--SSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNG--LKP 449

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLD 741
               Y +      K      A  L  +M  +G   D
Sbjct: 450 DKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 259/578 (44%), Gaps = 42/578 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI+ Y   GD   A      +      PD + Y + +    R  LF  A  ++  M
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +  C     T++ L+ GL  +G    A+ +   M   G  P+   Y+I++ GLC   RA
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA  L       G  P+   YNAL++G+C    ++ A+ + +  +  G +P + +Y+ L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  ++ + + A   Y +M E  + P+VV Y  +I+G    G ++ A +LL  M   G+
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P+ +    LI   C  G +++A+     + ++    N   +T +I  +C++G  D A  
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGE-LEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           L  K+   G  P   M+++LIDGLC+  + LE  +LL   +E G                
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQA------------- 422

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +      +++++           I  ++A +G  PD++TY   I  +C+ G +  A  +
Sbjct: 423 -NAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESM 481

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             ++   G+RP+  TY TLI G   +     AF     M  NGC P+   Y  L+    +
Sbjct: 482 MIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLK 541

Query: 579 RRKFS--LAFSLWLQYLRDISGRDDESMKSIEEFLQ---KGEVENA-------IQGLLEM 626
           +  +   +A S+ L  + D        MK +EE L+   K +  +A       I+ L ++
Sbjct: 542 KNSYHDLVADSISLWKIVD--------MKVLEELLEEVIKLQCSSASYVYDCFIRCLSKV 593

Query: 627 DFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           D      +L     +L+G+ Q   +  + ++++ ++EC
Sbjct: 594 D------RLEEAKSFLVGM-QSANLTPSEDVYTCMIEC 624



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 243/537 (45%), Gaps = 53/537 (9%)

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
           +P I   + L+  L++ G     +  ++ +  R  + N  TYT +I+  C       A R
Sbjct: 40  VPPIRCLNTLLMALARHGM----LSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKR 95

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
               +  +G +PD  AY + + G+C+      A  L     + G      +Y+ L+ GL 
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
            A    EA A +  M+ +   PD  +Y +M+ GL  AG+  +A+ LL+D   +G VP+  
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM 404
            YNALI G+C  G L+ A  +   +  +  LPN  T+T LICG C++G V+ A  L+++M
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 405 EKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKAS 463
            +AG  P+V  +  LI G C  G LE A  L + ME  G  P  +  L            
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCL------------ 323

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
              +++  C  G I +A + L  L + G   + + Y S+I+  CK G  +GA  L +++ 
Sbjct: 324 --VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKII 381

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
            +G  PD+  Y +LI+GL R ++  +A  +   M ++G   +   +  L+          
Sbjct: 382 TEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID--------- 432

Query: 584 LAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
                  ++LR+   R D S K I + +    V+  +                 YT+++ 
Sbjct: 433 -------KHLREF--RSD-SPKMISDRMAAAGVKPDV---------------VTYTVFIR 467

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
             CQDG++++A ++   +++        +   LI G    G +  A       + NG
Sbjct: 468 SYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNG 524



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 234/537 (43%), Gaps = 65/537 (12%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           D +  G V  V+ V+  LI GY   GD E A++ F  M+   C P+V  Y  ++    + 
Sbjct: 204 DAMGKGFVPNVA-VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKS 262

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A+ +Y  M++    PN+VT++ LI G    G  E A ++L  M   G+ PN++T 
Sbjct: 263 GKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTC 322

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
            ++I  LC+  R +EA +    +   G   + V Y ++++  CK  + D A  L++    
Sbjct: 323 LVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIIT 382

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE--------------------- 305
           +GFVP    YS LIDGL R  +  EA +    M E  ++                     
Sbjct: 383 EGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDS 442

Query: 306 --------------PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
                         PDVV Y V IR   + G+++DA  ++  M + G+ P+   YN LIK
Sbjct: 443 PKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIK 502

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR----NGMVDDA---------- 397
           G+ +LGL+ QA S    +      PN  ++T+L+  + +    + +V D+          
Sbjct: 503 GYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMK 562

Query: 398 --QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
             ++L  ++ K  C  +  +++  I  L K   LE+A      M             Q  
Sbjct: 563 VLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGM-------------QSA 609

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           N    +     M+E      L+ +A + L  + +   LP + +Y  +I   C+ G+ + A
Sbjct: 610 NLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTA 669

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             +F ++  K    D + +  LI+GL +     D  R+   M +  C P  A+Y  L
Sbjct: 670 KSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 181/438 (41%), Gaps = 55/438 (12%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +     ++  L+  G + D   L + M  R +    + Y  LI  +C  G L  A+  
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNL----HTYTTLINAYCHAGDLPAAKRH 96

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
              + +    P++H +T  + G CR G+   A +LF  M + GC  +   + AL+ GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           AG + +A  +F  M   G  P              D      MV   C AG   +A  +L
Sbjct: 157 AGMVREAMAVFAGMWPDGCAP--------------DSHVYSIMVHGLCGAGRAGEAVALL 202

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
                 G +P++  YN+LI+G+C  G++  A+ +FK +Q KG  P+  TY  LI G  + 
Sbjct: 203 TDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKS 262

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            + E A  ++ +M + G  P+   Y +L+   C       AF L              SM
Sbjct: 263 GKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLL------------HSM 310

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           ++       G   N    L+ +D                 LC+ G+++EA      LV+ 
Sbjct: 311 EAC------GLAPNEWTCLVLID----------------ALCKHGRIEEAQQFLGSLVQK 348

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
              V       +I  LCK G  D A ++    +  GF+    + + L+  L   ++NK +
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGL--CRENKLL 406

Query: 725 HAYHLLCRMKSVGYDLDA 742
            A  LL  M   G   +A
Sbjct: 407 EAISLLNDMIESGVQANA 424



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 171/388 (44%), Gaps = 16/388 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +I  L K    +   Q L  L    + V   ++  +I    K G  + A     K+    
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             PD ++Y+++++   R+   L A+++  +M++     N V F++LI+   +  +++   
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            + D M   G+ P+  TYT+ I   CQ  R ++A  + ++M D G  P+   YN L+ G+
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA-----WY---RKMF 300
             L  V +A + L++   +G  P   SY+ L+  L +   Y +  A     W     K+ 
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVL 564

Query: 301 EEKIEPDVVL--------YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           EE +E  + L        Y   IR LS+  ++++A   L  M+   + P    Y  +I+ 
Sbjct: 565 EELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC 624

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
              + LL +A      + KR+ LP   ++  +IC +C  G    A+ +F  +        
Sbjct: 625 CYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRD 684

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKME 440
              +  LIDGL + G     + L   ME
Sbjct: 685 EIAWKILIDGLLQKGNTADCSRLLSFME 712



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 125/294 (42%), Gaps = 28/294 (9%)

Query: 84  QTLDELRSGNVSVVSD------------VFFVLISGYYKVGDCEKALESFGKMKEFDCQP 131
           + L E RS +  ++SD             + V I  Y + G  E A     +M +   +P
Sbjct: 433 KHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRP 492

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE------ 185
           ++  YN ++       L   A +    M+   C PN  ++++L+  L K           
Sbjct: 493 NLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADS 552

Query: 186 ------VAIKMLDEMTQRGI----LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
                 V +K+L+E+ +  I        + Y   I  L +++R +EA    + M+ +  +
Sbjct: 553 ISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLT 612

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    Y  ++    +++ + EAL  L S  K  ++PRL SY  +I  L     +  A + 
Sbjct: 613 PSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSI 672

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           +  +  ++   D + + ++I GL + G   D  +LLS M E+   P +  Y+ L
Sbjct: 673 FGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 173/715 (24%), Positives = 303/715 (42%), Gaps = 19/715 (2%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRL-RSFASNSAVISMLLKPNGFDLYWQTLDELRSG 92
           V   +     P      F  AA+R R+  + AS + ++ ++          +  D ++  
Sbjct: 139 VIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQ 198

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
            V      F  +  G    G    A  +   MKE     + Y YN ++    +      A
Sbjct: 199 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREA 258

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
           L VY  M+    +P++ T+S+L+    K    E  + +L EM   G+ PN ++YTI I  
Sbjct: 259 LEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRV 318

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           L Q  R DEAYR+  +M++ GC PD + +  L+   C   R+ +A  +    +K    P 
Sbjct: 319 LGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPD 378

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
             +Y  L+D              +  M  +    +VV Y  +I  L + G+V +A+++  
Sbjct: 379 RVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFD 438

Query: 333 DMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
           +M+++GIVP+ Y YN+LI GF        A  L   +      PN +T  + I    ++G
Sbjct: 439 EMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSG 498

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRL 451
               A + +  M+  G  P V   NA++ GL K+G L  A  +F++++ +G +P      
Sbjct: 499 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSP------ 552

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +   M++    A    +A KI   + E+  +PD++  NSLI+   K G 
Sbjct: 553 --------DTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGR 604

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + A ++F +L+   L P   TY TL+ GL R  + ++   +  +M  +   P+   Y +
Sbjct: 605 GDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNT 664

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           ++   C+    + A  +           D  S  ++   L K E  N    +     K+ 
Sbjct: 665 ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVL 724

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIF-SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               A     L    + G +KEAL+I     ++  +     SC  L+ G+ K+   + ++
Sbjct: 725 IPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSI 784

Query: 691 DVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +       +G  L       L++ L   K  K + A+ L+ + KS G  L    Y
Sbjct: 785 EFAEIIASSGITLDDFFLCPLIKHL--CKQKKALEAHELVKKFKSFGVSLKTGSY 837



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/600 (25%), Positives = 276/600 (46%), Gaps = 24/600 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VL+  + K  D E  L    +M+    +P+VY Y   + +  + + F  A  +  EM
Sbjct: 276 TYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEM 335

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
               C P+++T ++LI  L  +G+   A  +  +M +    P++ TY  ++        +
Sbjct: 336 ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES 395

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
                ++  MK  G + + VAY A+++  C++ RV EAL +    ++ G VP   SY+ L
Sbjct: 396 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +A R+ +A   ++ M     +P+   + + I    ++G+   A++    M+ +GI
Sbjct: 456 ISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGI 515

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VPD    NA++ G    G L  A+ +  E+      P+T T+T++I    +    D+A K
Sbjct: 516 VPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVK 575

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRV 458
           +F  M +  C P V + N+LID L KAG  ++A  +FY++ E+   PT            
Sbjct: 576 IFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPT------------ 623

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T++      G + +   +L ++  S   P++ITYN++++  CK G +N AL +
Sbjct: 624 --DGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDM 681

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +  KG  PD  +Y T+I GL + +R  +AF IF QM +    P  A   +++    +
Sbjct: 682 LYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVK 740

Query: 579 RRKFSLAFSLWLQYLRDISGRDDES--MKSIEEFLQKGEVENAIQG---LLEMDFKLNDF 633
                 A  +  +Y      + D S     +E  L+K   E +I+    +      L+DF
Sbjct: 741 IGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDF 800

Query: 634 QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            L P    +  LC+  +  EA  +          +   S   LI GL     +D+A  +F
Sbjct: 801 FLCP---LIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLF 857



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 178/734 (24%), Positives = 310/734 (42%), Gaps = 101/734 (13%)

Query: 65   SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
            + +AV+  L K     +  +   EL++  VS  +  + ++I    K    ++A++ F  M
Sbjct: 521  AGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 580

Query: 125  KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
             E +C PDV + N++++  ++      A  ++Y++ ++N  P   T++ L+ GL + GK 
Sbjct: 581  IENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKV 640

Query: 185  EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            +  + +L+EM      PN  TY  ++  LC+    ++A  +   M   GC PD  +YN +
Sbjct: 641  KEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTV 700

Query: 245  LNGFCKLRRVDEALAL------------------LRSFEKDGFV---------------P 271
            + G  K  R +EA ++                  L SF K G +                
Sbjct: 701  IYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGS 760

Query: 272  RLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            +    SC  L++G+ +    +++  +   +    I  D      +I+ L +  K  +A +
Sbjct: 761  KTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHE 820

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L+   +  G+   T  YN+LI G  D  L+D A  L  E+ +    P+  T+ +L+  M 
Sbjct: 821  LVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 880

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT-- 446
            ++  +++  K+  +M + G   +   +N +I GL K+  LE+A  L+Y  M  G +PT  
Sbjct: 881  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 940

Query: 447  ----LFLRLSQGGNRVHDKASLQTMVEQY-----CT-----------AGLIHKAYKILMQ 486
                L   L + G R+ D  +L   + +Y     CT           AG   K   +   
Sbjct: 941  TYGPLLDGLLKAG-RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            + + G  PDI +Y  +I+  CK G +N  L  F++L   GL PD +TY  LI+GL +  R
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
             E+A  +F +M + G  P+   Y SL+    +                  +G+  E+ K 
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK------------------AGKAAEAGKM 1101

Query: 607  IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
             EE L KG             +K N F    Y   + G    G    A   +  ++    
Sbjct: 1102 YEELLTKG-------------WKPNVFT---YNALIRGYSVSGSTDSAYAAYGRMIVGGC 1145

Query: 667  IVTPPSCVKLIHGLCK---RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
            +    +C   IH L K   +G  D    +  +    G +   R   + + S    +DN  
Sbjct: 1146 LPNSSTC--HIHELMKTFLKGDSDSYEIIVTFINAEGMLAYSRAWKFCISS---REDNGC 1200

Query: 724  VHAYHLLCRMKSVG 737
            VH       M S G
Sbjct: 1201 VHPQQFAKFMASCG 1214



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 167/698 (23%), Positives = 308/698 (44%), Gaps = 55/698 (7%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +AVI  L +        +  DE++   +      +  LISG+ K      ALE F  M  
Sbjct: 418  TAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDI 477

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               +P+ Y +   +N   +    + A+  Y  M     +P++V  + ++ GL+KSG+  +
Sbjct: 478  HGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGM 537

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++  E+   G+ P+  TYT++I    + ++ DEA ++F  M ++ C PD +  N+L++
Sbjct: 538  AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLID 597

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  R DEA  +    ++    P  G+Y+ L+ GL R  +  E      +M+     P
Sbjct: 598  TLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 657

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +++ Y  ++  L + G V DA+ +L  M  +G +PD   YN +I G       ++A S+ 
Sbjct: 658  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF--------NKMEKAGCFPSVGMFNA 418
             ++ K+  +P+  T   ++    + G++ +A  +         +K +++ C       ++
Sbjct: 718  CQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSC-------HS 769

Query: 419  LIDGLCKAGELEKANLLFYKMEIGKNPTL----------FLRLSQGGNRVHD-------- 460
            L++G+ K    EK+ + F ++      TL           L   +     H+        
Sbjct: 770  LMEGILKKAGTEKS-IEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 828

Query: 461  KASLQTMVEQYCTAGLIHK-----AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
              SL+T        GL+ +     A  +  ++ E G  PD  TYN L++   K   I   
Sbjct: 829  GVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEM 888

Query: 516  LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            LK+ +E+  KG     VTY T+I+GL +  R E A  ++  +   G +P+P  Y  L+  
Sbjct: 889  LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 948

Query: 576  SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
              +  +   A +L+ + L +   + + ++ +I   L    +    + +  +   + D  +
Sbjct: 949  LLKAGRIEDAENLFNEML-EYGCKANCTIYNI--LLNGHRIAGNTEKVCHLFQDMVDQGI 1005

Query: 636  AP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDL 688
             P    YTI +  LC+ GQ+ + L  F  L+E   +   P  +    LI GL K   L+ 
Sbjct: 1006 NPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE---MGLEPDLITYNLLIDGLGKSKRLEE 1062

Query: 689  AMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            A+ +F    K G +  P +  Y    L   K  K   A
Sbjct: 1063 AVSLFNEMQKKGIV--PNLYTYNSLILHLGKAGKAAEA 1098



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 4/381 (1%)

Query: 64   ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LISGYYKVGDCEKALESF 121
            +S  +++  +LK  G +   +  + + S  +++  D FF+  LI    K     +A E  
Sbjct: 765  SSCHSLMEGILKKAGTEKSIEFAEIIASSGITL--DDFFLCPLIKHLCKQKKALEAHELV 822

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             K K F        YN+++     + L  +A  ++ EM +L C P+  T++LL++ + KS
Sbjct: 823  KKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 882

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
             + E  +K+ +EM ++G      TY  +ISGL +  R ++A  L+  +   G SP    Y
Sbjct: 883  MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 942

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
              LL+G  K  R+++A  L     + G       Y+ L++G   A   ++    ++ M +
Sbjct: 943  GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 1002

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
            + I PD+  Y ++I  L +AG++ D +     + E G+ PD   YN LI G      L++
Sbjct: 1003 QGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEE 1062

Query: 362  ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
            A SL  E+ K+  +PN +T+  LI  + + G   +A K++ ++   G  P+V  +NALI 
Sbjct: 1063 AVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIR 1122

Query: 422  GLCKAGELEKANLLFYKMEIG 442
            G   +G  + A   + +M +G
Sbjct: 1123 GYSVSGSTDSAYAAYGRMIVG 1143


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 217/424 (51%), Gaps = 19/424 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A++ +M +L       TF++++  L  +GK   A+++L +M +    PN  TY  VI+
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 212 GLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           G C   R   A  +  +M++  G +P+   Y  +++G+CK+ RVDEA+ +       G V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 271 -PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P    Y+ LI G     + D A  +  +M E  +   V  Y +++  L   G+  +A +
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L+ +M  +G+ PD + YN LI G C  G + +A  +   + +R       T+T LI  + 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G V +  KLF++  + G  P + ++NALI+    +G +++A  +  +ME  +      
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR------ 761

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  T++   C  G + +A K++ ++ E G  PD++TYN+LI+G+   
Sbjct: 762 -------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 814

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++  AL++  E+  KG  P  +TY  LI GL +  + +DA  +  +M +NG TP  + Y
Sbjct: 815 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 874

Query: 570 KSLM 573
            SL+
Sbjct: 875 ISLI 878



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 240/516 (46%), Gaps = 27/516 (5%)

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           +  V   +KAL     +   D  P   + N +L  +   +    +L +Y  M  L+   +
Sbjct: 398 FKSVLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS 456

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             +   L++ L  +     A  +  +M +  +     T+ I++  LC   +   A  L  
Sbjct: 457 TASLHPLLSALPSAP----AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR 512

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRA 286
           +M      P+ V YN ++ GFC   RV  AL ++R   E+ G  P   +Y  +I G  + 
Sbjct: 513 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 287 KRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            R DEA   + +M  + +++P+ V+Y  +I G  + GK+  A+     M ERG+      
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+      G   +A  L  E+  +   P+  T+ ILI G C+ G V  A ++F  M 
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASL 464
           + G   +V  + ALI  L K G++++ + LF + +  G  P L L               
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL--------------Y 734

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  + T+G I +A++I+ ++ +    PD +TYN+L+ G C +G ++ A KL  E+  
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 794

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G++PD VTY TLI+G       +DA RI  +M   G  P+   Y +L+   C+  +   
Sbjct: 795 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 854

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           A ++  + + +    DD +  S+ E L   E E AI
Sbjct: 855 AENMVKEMVENGITPDDSTYISLIEGLTT-EDERAI 889



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 183/360 (50%), Gaps = 5/360 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  +I+G+   G  + AL+   +M+E     P+ Y Y  V++   +      A+ V+ E
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580

Query: 159 MV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           M+ K    P  V ++ LI G    GK + A+   D M +RG+     TY +++  L    
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R  EAY L  +M   G +PD   YN L+NG CK   V +AL +  +  + G    + +Y+
Sbjct: 641 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 700

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI  L +  +  E    + +     I PD+VLY  +I   S +G +  A +++ +M ++
Sbjct: 701 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I PD   YN L++G C LG +D+AR L  E+ +R   P+  T+  LI G    G V DA
Sbjct: 761 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 820

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP--TLFLRLSQG 454
            ++ N+M   G  P++  +NALI GLCK G+ + A N++   +E G  P  + ++ L +G
Sbjct: 821 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 2/343 (0%)

Query: 88  ELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFR 145
           E+R  G ++     +  +ISG+ KVG  ++A++ F +M  + + +P+  +YNA++     
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     AL     MV+      + T++LL++ L   G+   A ++++EM  +G+ P+ FT
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y I+I+G C+     +A  +F  M   G     V Y AL+    K  +V E   L     
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P L  Y+ LI+    +   D A+    +M +++I PD V Y  ++RGL   G+V 
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A KL+ +M ERGI PD   YN LI G+   G +  A  ++ E+  +   P   T+  LI
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
            G+C+NG  DDA+ +  +M + G  P    + +LI+GL    E
Sbjct: 844 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 20/413 (4%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+A +  MF  ++      + +M+R L  AGK   A++LL  M      P+   YN +I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 352 GFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGC 409
           GFC  G +  A  +  E+ +R  + PN +T+  +I G C+ G VD+A K+F++M  K   
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P   M+NALI G C  G+L+ A LL+    + +   + +            A+   +V 
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTA-LLYRDRMVERGVAMTV------------ATYNLLVH 634

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G   +AY+++ ++   G  PD+ TYN LING CK GN+  AL++F+ +  +G+R 
Sbjct: 635 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 694

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             VTY  LI  L +  + ++  ++F +  + G  P   +Y +L+           AF + 
Sbjct: 695 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 754

Query: 590 LQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +  +     DD +  ++   L   G V+ A + + EM  +     L  Y   + G    
Sbjct: 755 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 814

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           G VK+AL I + ++      T  +   LI GLCK G  D A ++    ++NG 
Sbjct: 815 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 867



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 155/321 (48%), Gaps = 1/321 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           VIS   K    D   +  DE L  G V   + ++  LI GY   G  + AL    +M E 
Sbjct: 561 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 620

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
                V  YN +++  F       A  +  EM      P++ T+++LING  K G  + A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +++ + M++RG+     TYT +I  L +  +  E  +LF +    G  PD V YNAL+N 
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
                 +D A  ++   EK    P   +Y+ L+ GL    R DEA     +M E  I+PD
Sbjct: 741 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  +I G S  G VKDA+++ ++M  +G  P    YNALI+G C  G  D A ++  
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 860

Query: 368 EIWKRDSLPNTHTFTILICGM 388
           E+ +    P+  T+  LI G+
Sbjct: 861 EMVENGITPDDSTYISLIEGL 881



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 51/272 (18%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C+AG   +A ++L Q+      P+ +TYN++I GFC  G +  AL + +E+
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545

Query: 523 QLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRR 580
           + +G + P+  TYGT+I+G  +V R ++A ++F +M   G   P   +Y +L+   C + 
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 581 KFSLA------------------FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           K   A                  ++L +  L  + GR  E+ + +EE   KG        
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALF-MDGRGTEAYELVEEMGGKG-------- 656

Query: 623 LLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                       LAP    Y I + G C++G VK+AL IF  +       T  +   LI+
Sbjct: 657 ------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            L K+G +     +F   ++ G  +RP +  Y
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRG--IRPDLVLY 734



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 1/198 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T +   + K    Q   + F  A +R         +A+I+        D  ++ + E
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    ++     +  L+ G   +G  ++A +   +M E   QPD+  YN +++    K  
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL +  EM+     P ++T++ LI GL K+G+ + A  M+ EM + GI P+  TY  
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876

Query: 209 VISGL-CQINRADEAYRL 225
           +I GL  +  RA +  RL
Sbjct: 877 LIEGLTTEDERAIDDERL 894


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 177/727 (24%), Positives = 316/727 (43%), Gaps = 45/727 (6%)

Query: 3    STLNEVLTILDTVTPIEPALEPLLPF-LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLR 61
            ++L  VL    T      +L  LLP  LS   + + +    +P +      W+       
Sbjct: 975  ASLAGVLATRSTNPTWARSLAALLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQSPDHHV 1034

Query: 62   SFA-----SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEK 116
            +       ++SA++ +L +   FD    TL  +     +        L++ Y   G   K
Sbjct: 1035 ALQDPTPLAHSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGK 1094

Query: 117  ALESFGKMKE-FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
            A +   +++E +   P+V   N +L +   ++ +  A  +Y EM+  +   +  +  +L+
Sbjct: 1095 ATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLV 1154

Query: 176  NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
             GL    + E  +K+++     G +P+   Y ++I G C+         L  +M+  G  
Sbjct: 1155 RGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFL 1214

Query: 236  PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            P  V Y +L+N   K   +++  +L     K GF P +  Y+ +ID L + +   +A   
Sbjct: 1215 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVI 1274

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
             ++MF    +PD++ +  +I GL   G V+ A   L +   R + P+   Y  LI GFC 
Sbjct: 1275 LKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCM 1334

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
             G L  A  L VE+  R   P+  TF  LI G+   G V +A  +  KM +   FP V +
Sbjct: 1335 RGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 1394

Query: 416  FNALIDGLCKAGELEKA-NLLFYKMEIGKNP------TL---FLRLSQGGNR-------- 457
            +N LI GLCK   L  A N+L   +E    P      TL   F+R    G+         
Sbjct: 1395 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 1454

Query: 458  ----VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                  D  S   M++ YC  G++ +A   +  + + G +PD  TY ++I+G+ K GN+N
Sbjct: 1455 HKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN 1514

Query: 514  GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            GAL+   ++  +  +P+ VTY +LING  +    + A  +F  M     +P+   Y  L+
Sbjct: 1515 GALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILI 1574

Query: 574  TWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-------------QKGEVENAI 620
                ++ K   A   +   L +    +D ++  +   L                EV    
Sbjct: 1575 GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKD 1634

Query: 621  QGLL---EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
              L+   ++ F + D + + Y   +  LC+   ++EAL+  + + +   +  P + + L+
Sbjct: 1635 ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1694

Query: 678  HGLCKRG 684
            +G C  G
Sbjct: 1695 YGFCSVG 1701



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 217/480 (45%), Gaps = 37/480 (7%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            LI+   K GD EK    F +M++    P+V IYN+V++   + +    A+ +  +M    
Sbjct: 1223 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG 1282

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
            C P+I+TF+ LI GL   G    A   L E  +R + PN+ +YT +I G C       A 
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1342

Query: 224  RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             L ++M   G +PD V + AL++G     +V EAL +     +    P +  Y+ LI GL
Sbjct: 1343 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402

Query: 284  FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
             + +    A     +M E+ ++PD  +Y  +I G   +  + DA K+   M  +GI PD 
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462

Query: 344  YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
               NA+IKG+C  G++ +A      + K   +P+  T+T +I G  + G ++ A +    
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1522

Query: 404  MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-------IGKNPTLFLRLSQGGN 456
            M K  C P+V  +++LI+G CK G+ + A  LF  M+       +     L   L +   
Sbjct: 1523 MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1582

Query: 457  RVHDKASLQTMVEQYCTA----------GL-----------------IHKAYKILM---Q 486
             +      +TM+  +C+           GL                 +H    +L+   +
Sbjct: 1583 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1642

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            L      P    YN++I   C+   +  AL     +  KG  P+ +T+ +L+ G   V +
Sbjct: 1643 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 225/559 (40%), Gaps = 55/559 (9%)

Query: 166  PNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P       L+   + +G    A KM + +  Q G LP       ++  L +  R D+A +
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 225  LFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            L+ +M  KDSG   D  +   L+ G C  RRV+E L L+ +    G +P +  Y+ LIDG
Sbjct: 1134 LYDEMLGKDSGA--DNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDG 1191

Query: 283  LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
              R            +M  +   P +V YG +I  L + G ++    L  +MR+RG  P+
Sbjct: 1192 YCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPN 1251

Query: 343  TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               YN++I   C      QA  +  +++     P+  TF  LI G+C  G V  A+    
Sbjct: 1252 VQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1311

Query: 403  KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            +  +    P+   +  LI G C  GEL  A+ L  +M              G     D  
Sbjct: 1312 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM-------------MGRGHTPDVV 1358

Query: 463  SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            +   ++     AG + +A  +  ++ E    PD+  YN LI+G CK   +  A  + +E+
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 523  QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              K ++PD   Y TLI+G  R +   DA +IF  M   G  P      +++   C+    
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 583  SLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            S A  L +  +R +    DE                                   YT  +
Sbjct: 1479 SEAI-LCMSNMRKVGCIPDEFT---------------------------------YTTVI 1504

Query: 643  IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             G  + G +  AL     +++ K      +   LI+G CK G  D A  +F         
Sbjct: 1505 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA-- 1562

Query: 703  LRPRVCNY-LLRSLLFSKD 720
            L P V  Y +L   LF KD
Sbjct: 1563 LSPNVVTYTILIGSLFKKD 1581



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 190/427 (44%), Gaps = 3/427 (0%)

Query: 100  VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
             F  LI+G    G   KA     +    +  P+   Y  +++    +   ++A  +  EM
Sbjct: 1289 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348

Query: 160  VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     P++VTF  LI+GL  +GK   A+ + ++MT+R + P+   Y ++ISGLC+    
Sbjct: 1349 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRML 1408

Query: 220  DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
              A  +  +M +    PD   Y  L++GF +   + +A  +    E  G  P + S + +
Sbjct: 1409 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAM 1468

Query: 280  IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
            I G  +     EA      M +    PD   Y  +I G ++ G +  A++ L DM +R  
Sbjct: 1469 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 1528

Query: 340  VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             P+   Y++LI G+C  G  D A  L   +      PN  T+TILI  + +   V  A  
Sbjct: 1529 KPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 1588

Query: 400  LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
             F  M    C P+    + L++GL         ++     E+     L +   +    + 
Sbjct: 1589 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG 1648

Query: 460  D--KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG-NINGAL 516
            D   ++   ++   C   ++ +A     ++A+ G +P+ IT+ SL+ GFC VG ++N   
Sbjct: 1649 DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRT 1708

Query: 517  KLFKELQ 523
             L  E Q
Sbjct: 1709 ILPNEFQ 1715



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 220/486 (45%), Gaps = 21/486 (4%)

Query: 229  MKDSGCSPDFVAYNALLNGFCKLRRVDEALALL-RSFEKDGFVPRLGSYSCLIDGLFRAK 287
            M  +G +P      AL+  +     + +A  +  R  E+ G +P +   + L+  L   +
Sbjct: 1067 MSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQR 1126

Query: 288  RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYN 347
            R+D+A   Y +M  +    D     V++RGL    +V++ +KL+      G +P    YN
Sbjct: 1127 RWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYN 1186

Query: 348  ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
             LI G+C  G + +   L  E+  +  LP   T+  LI  + + G ++    LF +M K 
Sbjct: 1187 VLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1246

Query: 408  GCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G  P+V ++N++ID LCK     +A ++  +M   G +P              D  +  T
Sbjct: 1247 GFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDP--------------DIITFNT 1292

Query: 467  MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
            ++   C  G + KA   L +       P+ ++Y  LI+GFC  G +  A  L  E+  +G
Sbjct: 1293 LITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1352

Query: 527  LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
              PD VT+G LI+GL    +  +A  +  +M +    P   +Y  L++  C++R    A 
Sbjct: 1353 HTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAK 1412

Query: 587  SLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIG 644
            ++ L+ + + + + DE + +  I+ F++   + +A +    M+ K     +      + G
Sbjct: 1413 NI-LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKG 1471

Query: 645  LCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILR 704
             CQ G + EA+   S + +   I    +   +I G  K+G L+ A+      +K     +
Sbjct: 1472 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK--CK 1529

Query: 705  PRVCNY 710
            P V  Y
Sbjct: 1530 PNVVTY 1535


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 209/419 (49%), Gaps = 22/419 (5%)

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
            L +S +  +++    +M +  +    ++ TIVI GLC+  R + A  L L+M   G  P
Sbjct: 189 ALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKP 248

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           + V YN L+N + K+   +    +LR  E D  V    +Y+ LI+    + +  EA   +
Sbjct: 249 NVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVF 308

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            KM E  +E D+ ++  +I    + G +K A  L  ++ ERG+V + + Y ALI G C+ 
Sbjct: 309 EKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNS 368

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G LD A  L  E+  +    N   F  LI G C+ GM+D+A ++ + MEK G    +  +
Sbjct: 369 GQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTY 428

Query: 417 NALIDGLCKAGELEKAN-LLFYKMEIGKNP-----TLFLRLS-QGGNRVHDKASLQ---- 465
           N +  GLCK    E+A   LF  +E G +P     T+ + +  + GN V  +   Q    
Sbjct: 429 NTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKK 488

Query: 466 -----------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                      T+++ Y   G + +AY++  ++   G   DI TY +L++G C  G +  
Sbjct: 489 KGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEE 548

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           AL L  E+  KGL    VTY  +I+GL +  R E+AFR++ +M   G TP   VY SL+
Sbjct: 549 ALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 203/425 (47%), Gaps = 15/425 (3%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F KM EF     VY    V++   +K     A  +  EM      PN+VT++ L+N   K
Sbjct: 203 FKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIK 262

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
               E   +ML  M    ++ N  TYT++I       +  EA ++F KM + G   D   
Sbjct: 263 IMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHV 322

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           + ++++  CKL  +  A AL     + G V    +Y  LI G   + + D A     +M 
Sbjct: 323 FTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQ 382

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
            + ++ ++V++  +I G  + G + +A+++   M ++G   D + YN +  G C L   +
Sbjct: 383 SQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHE 442

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A+     + ++   PN  +FTI+I   C+ G + +A+++F  M+K G  P+V  +N LI
Sbjct: 443 EAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLI 502

Query: 421 DGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           DG  K G+L++A  L  +ME IG    ++              +  T+V   C  G + +
Sbjct: 503 DGYSKKGKLKEAYRLKDEMESIGMTSDIY--------------TYTTLVHGECVFGKVEE 548

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  +L ++   G    I+TY ++I+G  K G    A +L+ E+   GL PD   Y +L+ 
Sbjct: 549 ALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVA 608

Query: 540 GLQRV 544
            L + 
Sbjct: 609 NLHKT 613



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 10/345 (2%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA---VLNIAFRKQLFLLALA-- 154
            +  L++ Y K+ D E   E    M     + D  +YNA    L I +      +A A  
Sbjct: 252 TYNTLVNAYIKIMDFEGVNEMLRLM-----EMDKVVYNAATYTLLIEWYGSSGKIAEAEK 306

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           V+ +M++     +I  F+ +I+   K G  + A  + DE+ +RG++ N  TY  +I G C
Sbjct: 307 VFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTC 366

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
              + D A  L  +M+  G   + V +N L+NG+CK   +DEAL +    EK GF   + 
Sbjct: 367 NSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIF 426

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           +Y+ +  GL +  R++EA  W   M E+ ++P+ V + +MI    + G + +A ++  DM
Sbjct: 427 TYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDM 486

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
           +++G  P+   YN LI G+   G L +A  L+ E+       + +T+T L+ G C  G V
Sbjct: 487 KKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKV 546

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           ++A  L N++ + G   S+  + A+I GL K G  E+A  L+ +M
Sbjct: 547 EEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEM 591



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 142/289 (49%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  +IS   K+G+ ++A   F ++ E     + + Y A+++          A  +  EM
Sbjct: 322 VFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEM 381

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                  N+V F+ LING  K G  + A++M D M ++G   + FTY  +  GLC++NR 
Sbjct: 382 QSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRH 441

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA R    M + G  P+ V++  +++  CK   + EA  + +  +K G  P + +Y+ L
Sbjct: 442 EEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTL 501

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           IDG  +  +  EAY    +M    +  D+  Y  ++ G    GKV++A+ LL+++  +G+
Sbjct: 502 IDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGL 561

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
                 Y A+I G    G  ++A  L  E+      P+   +T L+  +
Sbjct: 562 AISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 134/284 (47%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++IS   K       +   DEL    +   +  +  LI G    G  + A     +M+ 
Sbjct: 324 TSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS 383

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                ++ I+N ++N   +K +   AL +   M K     +I T++ +  GL K  + E 
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEE 443

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A + L  M ++G+ PN  ++TI+I   C+     EA R+F  MK  G  P+ V YN L++
Sbjct: 444 AKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLID 503

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+ K  ++ EA  L    E  G    + +Y+ L+ G     + +EA     ++  + +  
Sbjct: 504 GYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAI 563

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            +V Y  +I GLS+ G+ ++A +L  +M   G+ PD   Y +L+
Sbjct: 564 SIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 137/290 (47%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T++ S   K  N +  F  F    +R  + +  +  A+I         D     ++E++S
Sbjct: 324 TSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQS 383

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             + +   +F  LI+GY K G  ++AL     M++   + D++ YN +     +      
Sbjct: 384 QGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEE 443

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A    + MV+    PN V+F+++I+   K G    A ++  +M ++G  PN  TY  +I 
Sbjct: 444 AKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLID 503

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G  +  +  EAYRL  +M+  G + D   Y  L++G C   +V+EAL LL    + G   
Sbjct: 504 GYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAI 563

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
            + +Y+ +I GL +  R +EA+  Y +M    + PD  +Y  ++  L + 
Sbjct: 564 SIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHKT 613



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 160/367 (43%), Gaps = 49/367 (13%)

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
           ++ TI+I G+C+ G V+ A+ L  +M   G  P+V  +N L++   K  + E  N +   
Sbjct: 216 YSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRL 275

Query: 439 MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT 498
           ME+ K              V++ A+   ++E Y ++G I +A K+  ++ E G   DI  
Sbjct: 276 MEMDK-------------VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHV 322

Query: 499 YNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
           + S+I+  CK+GN+  A  LF EL  +GL  ++ TYG LI+G     + + A  +  +M 
Sbjct: 323 FTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQ 382

Query: 559 QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
             G   +  ++ +L+   C++                  G  DE+++ +++ ++K   EN
Sbjct: 383 SQGLDMNLVIFNTLINGYCKK------------------GMIDEALR-MQDVMEKKGFEN 423

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
            I                 Y     GLC+  + +EA      +VE        S   +I 
Sbjct: 424 DI---------------FTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMID 468

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
             CK G L  A  VF    K G   +P V  Y      +SK  K   AY L   M+S+G 
Sbjct: 469 IHCKEGNLVEAERVFQDMKKKG--EKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGM 526

Query: 739 DLDACLY 745
             D   Y
Sbjct: 527 TSDIYTY 533



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/477 (21%), Positives = 203/477 (42%), Gaps = 53/477 (11%)

Query: 279 LIDGLFRA----KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           L D LFR       ++E +  +  M    ++ D     V +  L  + ++  ++     M
Sbjct: 147 LCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKM 206

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP------------------ 376
            E  +    Y    +I G C  G +++A+ L +E+  +   P                  
Sbjct: 207 VEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDF 266

Query: 377 -----------------NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
                            N  T+T+LI     +G + +A+K+F KM + G    + +F ++
Sbjct: 267 EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSI 326

Query: 420 IDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
           I   CK G +++A              LF  L++ G  V +  +   ++   C +G +  
Sbjct: 327 ISWQCKLGNMKRA------------FALFDELNERG-LVANAHTYGALIHGTCNSGQLDA 373

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A  ++ ++   G   +++ +N+LING+CK G I+ AL++   ++ KG   D  TY T+  
Sbjct: 374 AEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAG 433

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           GL +++R E+A R    M + G  P+   +  ++   C+      A  ++    +     
Sbjct: 434 GLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKP 493

Query: 600 DDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           +  +  + I+ + +KG+++ A +   EM+       +  YT  + G C  G+V+EAL + 
Sbjct: 494 NVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLL 553

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           + +      ++  +   +I GL K G  + A  ++   +  G     RV   L+ +L
Sbjct: 554 NEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 221/439 (50%), Gaps = 15/439 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G++ +   EKA++   ++ E   +PDV+ YNAV++   +      A  V   M K  
Sbjct: 118 LIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT+++LI      G+ ++A++++D++ +    P   TYTI+I         DEA 
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           +L  +M   G  PD   YN ++NG CK   +D A   L    K+G V  + +Y+ L+  L
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               +++        M  +  EP+ + Y  +I  L   GK+ +A  +L  M+E+ + PD 
Sbjct: 297 LNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y+ LI   C  G +D A     ++     LP+  ++  ++  +C+NG  D+A  +F K
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           + + GC P+ G +N L   L  +G+  +A  +  +M           LS G +   D+ +
Sbjct: 417 LGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEM-----------LSNGID--PDEIT 463

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFKEL 522
             +++   C  GL+ +A ++L+ + ES    P +I+YN+++ G CKV  I  A+++   +
Sbjct: 464 YNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAM 523

Query: 523 QLKGLRPDSVTYGTLINGL 541
             +G  P+  TY  LI G+
Sbjct: 524 VNEGCLPNETTYTLLIQGI 542



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 242/527 (45%), Gaps = 53/527 (10%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             F   +N   KS K + ++  L  M  RG  P+    T +I G   + + ++A ++   
Sbjct: 78  TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           ++  G  PD  AYNA+++GFCK  RVD A  +L   +K GF P + +Y+ LI       R
Sbjct: 138 LEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            D A     ++ ++  +P V+ Y ++I      G + +AMKLL +M  RG+ PD Y YN 
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           ++ G C  G+LD+A      I K   +    T+ IL+  +   G  +  +KL + M   G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 409 CFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           C P+   ++ LI  LC+ G++++A N+L    E    P              D  S   +
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAP--------------DGYSYDPL 362

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +   C  G +  A + L  +   G+LPDI++YNS++   CK GN + AL +F++L   G 
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            P++ +Y TL   L     +  A  +  +M  NG  P    Y SL++  CR         
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR--------- 473

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ--LAPYTIWLIGL 645
                                     G V+ AI+ L++M F+    Q  +  Y   L+GL
Sbjct: 474 -------------------------DGLVDQAIELLVDM-FESEKCQPTVISYNTVLLGL 507

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           C+  ++ +A+ + + +V    +    +   LI G+   G+   AM++
Sbjct: 508 CKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 177/362 (48%), Gaps = 5/362 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            DL  + +D+L   N       + +LI      G  ++A++   +M     +PD Y YN 
Sbjct: 197 LDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNV 256

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           V+N   ++ +   A      + K  C+  + T+++L+  L   GK E   K++ +M  +G
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
             PN  TY+ +I+ LC+  + DEA  +   MK+   +PD  +Y+ L++  C+  +VD A+
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAI 376

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
             L      G +P + SY+ ++  L +    DEA   + K+ E    P+   Y  +   L
Sbjct: 377 EFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGAL 436

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PN 377
             +G    A+ ++ +M   GI PD   YN+LI   C  GL+DQA  L V++++ +   P 
Sbjct: 437 WSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPT 496

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG----ELEKAN 433
             ++  ++ G+C+   + DA ++   M   GC P+   +  LI G+  AG     +E AN
Sbjct: 497 VISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELAN 556

Query: 434 LL 435
           LL
Sbjct: 557 LL 558



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 171/365 (46%), Gaps = 38/365 (10%)

Query: 99  DVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           DVF    +ISG+ K    + A +   +MK+   +PDV  YN ++     +    LAL V 
Sbjct: 145 DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVM 204

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            +++K NC P ++T+++LI      G  + A+K+LDEM  RG+ P+++TY +V++G+C+ 
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
              D A+    ++  +GC      YN LL       + +    L+      G  P   +Y
Sbjct: 265 GMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITY 324

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           S LI  L R  + DEA    + M E+ + PD   Y  +I  L   GKV  A++ L DM  
Sbjct: 325 STLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMIS 384

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQA---------------------------------R 363
            G +PD   YN+++   C  G  D+A                                 R
Sbjct: 385 GGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIR 444

Query: 364 SLQ--VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALI 420
           +L   +E+      P+  T+  LI  +CR+G+VD A +L   M E   C P+V  +N ++
Sbjct: 445 ALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVL 504

Query: 421 DGLCK 425
            GLCK
Sbjct: 505 LGLCK 509



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 169/385 (43%), Gaps = 19/385 (4%)

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV-EIWKRDSLPNT 378
           ++ K  +++  L  M  RG  PD      LIKGF ++  +++A  +QV EI ++   P+ 
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKA--IQVMEILEKHGKPDV 146

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFY 437
             +  +I G C+   VD A K+ ++M+K G  P V  +N LI   C  G L+ A  ++  
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQ 206

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
            ++    PT+               +   ++E   T G I +A K+L ++   G  PD  
Sbjct: 207 LLKDNCKPTVI--------------TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRY 252

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TYN ++NG CK G ++ A +    +   G      TY  L+  L    + E   ++   M
Sbjct: 253 TYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDM 312

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEV 616
              GC P+P  Y +L+T  CR  K   A ++           D  S    I    ++G+V
Sbjct: 313 LVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKV 372

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           + AI+ L +M    +   +  Y   L  LC++G   EALNIF  L E        S   L
Sbjct: 373 DLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTL 432

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGF 701
              L   G    A+ + L  L NG 
Sbjct: 433 FGALWSSGDKIRALGMILEMLSNGI 457



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 169/408 (41%), Gaps = 59/408 (14%)

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
           C     D++      +  R   P+    T LI G      ++ A ++   +EK G  P V
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDV 146

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             +NA+I G CKA  ++ A+ +  +M+  G  P              D  +   ++  +C
Sbjct: 147 FAYNAVISGFCKADRVDHASKVLDRMKKRGFEP--------------DVVTYNILIGNFC 192

Query: 473 TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
             G +  A +++ QL +    P +ITY  LI      G I+ A+KL  E+  +GLRPD  
Sbjct: 193 GRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRY 252

Query: 533 TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY 592
           TY  ++NG+ +    + AF    ++ +NGC    + Y  L                    
Sbjct: 253 TYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNIL-------------------- 292

Query: 593 LRDI--SGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
           LRD+   G+ +   K + + L KG   N I                 Y+  +  LC+DG+
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT----------------YSTLITALCRDGK 336

Query: 651 VKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           + EA N+  V+ E        S   LI  LC+ G +DLA++     +  G +      N 
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNS 396

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
           +L SL   K+     A ++  ++  VG   +A  Y    +L    W++
Sbjct: 397 ILASL--CKNGNADEALNIFEKLGEVGCPPNAGSY---NTLFGALWSS 439


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 229/509 (44%), Gaps = 58/509 (11%)

Query: 114 CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSL 173
           CE+A E F +MK  +C PD   YNA+L++  +   +  A  V  EM    CLPNIVT++ 
Sbjct: 204 CEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNE 263

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           L++   ++G    A +M D M  +GI P+ FTYT ++S   +  + ++A  ++ +M+ S 
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323

Query: 234 CS-----------------------------------PDFVAYNALLNGFCKLRRVDEAL 258
           C+                                   PD V +N+LL  F K     E L
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            + R  +K GF P   +++ LI+   R    D+A + Y  M +    PD+  +  ++  L
Sbjct: 384 KVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAAL 443

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           +  G+ + A  +L ++      P+   Y +++  + + G L++ + + V+      +P T
Sbjct: 444 AREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEM-VDTLHTIYVPFT 502

Query: 379 ----HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANL 434
                TF +L+   C   +VD+A+  F  M   G       FNA+I    K G ++KA  
Sbjct: 503 KILLKTF-VLVYSKC--SLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATD 559

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL 493
            F  +   G  P              D  +   ++  Y   G+  K    L +   +G  
Sbjct: 560 TFALLRSTGLEP--------------DVVTYNCLMGMYGREGMYRKCEATLRECMAAGQT 605

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           PD+++YN++I  + K G ++ A ++F E+   G++PDS TY T +          +A  +
Sbjct: 606 PDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSV 665

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              M + GC P    Y++L+   C+  KF
Sbjct: 666 VKHMHKTGCKPDEVTYRTLVDAYCKIGKF 694



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 226/476 (47%), Gaps = 58/476 (12%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
           F  ++E     DVY Y ++++   R + F  AL  + +M +    P++VT++++I+   K
Sbjct: 105 FKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGK 164

Query: 181 SGKT-EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
            G++ E  +++ +EM  +GI P+++TY   I+     +  +EA  LF +MK S C+PD V
Sbjct: 165 KGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRV 224

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YNALL+ + K    +EA  +L+  E  G +P + +Y+ L+    RA   + A      M
Sbjct: 225 TYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSM 284

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI------KGF 353
             + IEPDV  Y  ++   S AGKV+ AM++ + MR     P+++ +NALI      K F
Sbjct: 285 VSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNF 344

Query: 354 CDLGLL---DQARSLQVEIWKRDSL--------------------------PNTHTFTIL 384
            ++ ++    QA  ++ +I   +SL                          P+  TF IL
Sbjct: 345 SEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNIL 404

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-------Y 437
           I    R G  D A  +++ M +AGC P +  FN L+  L + G  E A L+        Y
Sbjct: 405 IEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSY 464

Query: 438 KMEIGKNPTLFLRLSQGG---------NRVH------DKASLQTMVEQYCTAGLIHKAYK 482
           K       ++    + GG         + +H       K  L+T V  Y    L+ +A  
Sbjct: 465 KPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAED 524

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
             + +   G L D  T+N++I+ + K G ++ A   F  L+  GL PD VTY  L+
Sbjct: 525 AFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLM 580



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 245/557 (43%), Gaps = 34/557 (6%)

Query: 166 PNIVTFSLL--INGLSKSGKTEVAIKMLDEMTQR-GILPNKFTYTIVISGLCQINRADEA 222
           PN+ +  LL  + GL + G+   A+++ + M Q     P+  T  +++  L + ++    
Sbjct: 42  PNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTV 101

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RLF  +++ G   D  AY +L++   + R+  EAL      ++ G  P L +Y+ +ID 
Sbjct: 102 SRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIID- 160

Query: 283 LF--RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           L+  + + ++     + +M  + I+PD   Y   I   +     ++A +L + M+     
Sbjct: 161 LYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCT 220

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YNAL+  +   G  ++A ++  E+     LPN  T+  L+    R G+ + A ++
Sbjct: 221 PDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEM 280

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVH 459
            + M   G  P V  + +L+    +AG++E+A  ++ +M      P  F   +  G    
Sbjct: 281 KDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGK 340

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +K   + MV              I   +   G  PDI+T+NSL+  F K G  +  LK+F
Sbjct: 341 NKNFSEMMV--------------IFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVF 386

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           + ++  G  PD  T+  LI    R    + A  I+  M Q GCTP  A + +L+    R 
Sbjct: 387 RGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALARE 446

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
            ++  A  +  +  R     +D +  S +  +   GE+E     L EM   L+   + P+
Sbjct: 447 GRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEK----LKEMVDTLHTIYV-PF 501

Query: 639 T-----IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
           T      +++   +   V EA + F  +     +    +   +I    K+G +D A D F
Sbjct: 502 TKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTF 561

Query: 694 LYTLKNGFILRPRVCNY 710
                 G  L P V  Y
Sbjct: 562 ALLRSTG--LEPDVVTY 576



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/418 (21%), Positives = 166/418 (39%), Gaps = 74/418 (17%)

Query: 88  ELRSGNVS--VVSDVFFV--LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           E++   VS  +  DVF    L+S Y + G  E+A+E + +M+  +C P+ + +NA++ + 
Sbjct: 279 EMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMH 338

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            + + F   + ++ +M      P+IVT++ L+    K+G     +K+   M + G  P+K
Sbjct: 339 GKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDK 398

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCS---------------------------- 235
            T+ I+I    +   +D+A  ++  M  +GC+                            
Sbjct: 399 ATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDE 458

Query: 236 -------PDFVAYNALLNGFC------KLRR----------------------------- 253
                  P+ +AY ++L+ +       KL+                              
Sbjct: 459 LNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSL 518

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           VDEA     +    G++    +++ +I    +    D+A   +  +    +EPDVV Y  
Sbjct: 519 VDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNC 578

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++      G  +     L +    G  PD   YN +I  +   G L  A  +  E+    
Sbjct: 579 LMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNG 638

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
             P++ T+   +      GM  +A  +   M K GC P    +  L+D  CK G+ E+
Sbjct: 639 IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEE 696



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 46/380 (12%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           SF  N A+I M  K   F       +++++  V      +  L+  + K G   + L+ F
Sbjct: 328 SFTFN-ALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVF 386

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             MK+   +PD   +N ++    R      AL++Y  M++  C P++ TF+ L+  L++ 
Sbjct: 387 RGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALARE 446

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYT---------------------------------- 207
           G+ E A  +LDE+ +    PN   Y                                   
Sbjct: 447 GRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILL 506

Query: 208 ---IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA---LALL 261
              +++   C +   DEA   FL M+  G   D   +NA+++ + K   +D+A    ALL
Sbjct: 507 KTFVLVYSKCSL--VDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALL 564

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           RS    G  P + +Y+CL+    R   Y +  A  R+       PD+V Y  +I   S+ 
Sbjct: 565 RS---TGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKH 621

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G++  A ++  +M   GI PD++ YN  +  + + G+  +A S+   + K    P+  T+
Sbjct: 622 GQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTY 681

Query: 382 TILICGMCRNGMVDDAQKLF 401
             L+   C+ G  ++ +++ 
Sbjct: 682 RTLVDAYCKIGKFEEVERIL 701



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  F  +IS Y K G  +KA ++F  ++    +PDV  YN ++ +  R+ ++    A   
Sbjct: 538 TSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLR 597

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           E +     P++V+++ +I   SK G+   A ++  EM   GI P+ FTY   +   C +N
Sbjct: 598 ECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVG--CYVN 655

Query: 218 RA--DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
                EA  +   M  +GC PD V Y  L++ +CK+ + +E   +L+
Sbjct: 656 GGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 166/599 (27%), Positives = 273/599 (45%), Gaps = 21/599 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF +LI  Y + G    A+ +F  M     +P VY  N ++    +     L  + + +M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +     PN+ +F++LI+ L   GK + A+ +L  M + G +P   +Y  ++S  C+  R 
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  L   M+  G   D   YN  ++  C+  R  +   +L+        P   SY+ L
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I+G  +  +   A   + +M E  + P+++ Y ++I G    G  ++A+++L  M    +
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDV 346

Query: 340 VPDTYCYNALIKGFCDLGLLDQARS-LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            P+      L+ G       D AR+ L+     R SL N  + T++I G+CRNG++D+A 
Sbjct: 347 RPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL-NCISHTVMIDGLCRNGLLDEAF 405

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRV 458
           +L  +M K G  P +  F+ LI+G CK G + KA  +  K+             +G   V
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKI-----------YREG--FV 452

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
            +     T++   C  G +++A K    +  +G   D  T NSL+   C+ G +  A + 
Sbjct: 453 PNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +   GL P+SVT+  +ING   V     AF +F +M   G  PSP  Y SL+   C+
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCK 572

Query: 579 RRKFSLAFSLWLQYLRDIS-GRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
            + F  A  L L+ L  I    D  S  + I E  + G +  A++   EM          
Sbjct: 573 GQNFWEARKL-LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDLAMDVF 693
            YT  L GL ++G++  A      L++ K I+T  S V    I GL K G    A+ +F
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQ-KEILTLNSIVYTCFIDGLFKAGQSKAALYLF 689



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 243/519 (46%), Gaps = 15/519 (2%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +++ ++K     L W    ++ +  V      F +LIS     G  +KA+     M+   
Sbjct: 146 IMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNG 205

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             P +  YN +L+   +K  F  AL + + M       ++ T+++ I+ L ++ ++    
Sbjct: 206 YVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGY 265

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +L +M  + I PN+ +Y  +I+G  +  +   A R+F +M +   SP+ + YN L+NG+
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGY 325

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C     +EAL +L   E +   P   +   L++GL+++ ++D A     +    +   + 
Sbjct: 326 CINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNC 385

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           + + VMI GL   G + +A +LL +M + G+ PD   ++ LI GFC +G +++A+ +  +
Sbjct: 386 ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSK 445

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I++   +PN   F+ LI   C+ G V +A K +  M   G        N+L+  LC+ G+
Sbjct: 446 IYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505

Query: 429 L-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           L E    L +   IG  P              +  +   ++  Y   G    A+ +  ++
Sbjct: 506 LVEAEEFLHHISRIGLVP--------------NSVTFDCIINGYANVGDGSGAFSVFDRM 551

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
              G+ P   TY SL+   CK  N   A KL K+L    L  D+++Y TLI  + +    
Sbjct: 552 ISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNL 611

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
            +A R+F +M QN   P    Y  +++   R  +   AF
Sbjct: 612 LEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 240/513 (46%), Gaps = 25/513 (4%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           +F  LI    KVG+  +A++ +  M       D +  N+++         + A    + +
Sbjct: 457 IFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI 516

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            ++  +PN VTF  +ING +  G    A  + D M   G  P+ FTY  ++  LC+    
Sbjct: 517 SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNF 576

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA +L  K+     + D ++YN L+    K   + EA+ L     ++  +P   +Y+C+
Sbjct: 577 WEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636

Query: 280 IDGLFRAKRYDEAYAWY-RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           + GL R  R   A+ +  R M +E +  + ++Y   I GL +AG+ K A+ L  +M E+G
Sbjct: 637 LSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +  D    N++  G+  +G +  A SL  +   ++ +PN  TF IL+ G  R   +    
Sbjct: 697 LSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCF 756

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL----FLRLSQG 454
           KL+N M ++G FP+   +++LI GLC  G LE   +   KM I ++ T+    F  L + 
Sbjct: 757 KLYNLMRRSGFFPNRLTYHSLILGLCNHGMLE-LGIKMLKMFIAESSTIDDLTFNMLIRK 815

Query: 455 GNRVHD--------------KASL----QTMVEQYCTAGLIHKAYKILM-QLAESGNLPD 495
              ++D              + SL    Q  V       ++ + Y + M ++ + G +P 
Sbjct: 816 CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
              Y +++   C+VG+I GA KL  ++   G+  D      ++ GL    + E+A  I  
Sbjct: 876 SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +M +    P+ + + +LM   C++  F  A +L
Sbjct: 936 RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 244/545 (44%), Gaps = 29/545 (5%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L ++R+  ++     +  LI+G+ K G    A   F +M E +  P++  YN ++N 
Sbjct: 265 YLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILING 324

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
                 F  AL V   M   +  PN VT   L+NGL KS K +VA  +L+         N
Sbjct: 325 YCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLN 384

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             ++T++I GLC+    DEA++L ++M   G  PD + ++ L+NGFCK+  +++A  ++ 
Sbjct: 385 CISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMS 444

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
              ++GFVP    +S LI    +     EA  +Y  M       D      ++  L E G
Sbjct: 445 KIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENG 504

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K+ +A + L  +   G+VP++  ++ +I G+ ++G    A S+   +      P+  T+ 
Sbjct: 505 KLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYG 564

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFP---SVGMFNALIDGLCKAGELEKANLLFYKM 439
            L+  +C+     +A+KL  K+    C P       +N LI  + K+G L +A  LF +M
Sbjct: 565 SLLKVLCKGQNFWEARKLLKKLH---CIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 440 --------------------EIGKNPTLFL---RLSQGGNRVHDKASLQTMVEQYCTAGL 476
                                 G+    F+   RL Q      +       ++    AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
              A  +  ++ E G   D+I  NS+ +G+ ++G +  A  L  + + K + P+  T+  
Sbjct: 682 SKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNI 741

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI 596
           L++G  R       F+++  M ++G  P+   Y SL+   C      L   +   ++ + 
Sbjct: 742 LLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAES 801

Query: 597 SGRDD 601
           S  DD
Sbjct: 802 STIDD 806



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 164/692 (23%), Positives = 285/692 (41%), Gaps = 133/692 (19%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           KM+     P+   YN ++N   ++    +A  V+ EM++LN  PN++T+++LING   +G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
             E A+++LD M    + PN+ T   +++GL +  + D A  +  +   +  S + +++ 
Sbjct: 330 NFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHT 389

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            +++G C+   +DEA  LL    KDG  P + ++S LI+G  +    ++A     K++ E
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYRE 449

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+ V++  +I    + G V +AMK  + M   G   D +  N+L+   C+ G L +A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
                 I +   +PN+ TF  +I G    G    A  +F++M   G  PS   + +L+  
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKV 569

Query: 423 LCKAGELEKANLLFYKME--------IGKNPTLFLRLSQGGNRVHDKASLQTMVEQ---- 470
           LCK     +A  L  K+         I  N TL + +S+ GN +      + M++     
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYN-TLIVEISKSGNLLEAVRLFEEMIQNNILP 628

Query: 471 -----YCT-AGLIHK-----AYKILMQLAESGNLP-DIITYNSLINGFCKVGNINGALKL 518
                 C  +GLI +     A+  L +L +   L  + I Y   I+G  K G    AL L
Sbjct: 629 DSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYL 688

Query: 519 FKELQLKGLR-----------------------------------PDSVTYGTLINGLQR 543
           FKE++ KGL                                    P+  T+  L++G  R
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD-- 601
                  F+++  M ++G  P+   Y SL+   C      L   +   ++ + S  DD  
Sbjct: 749 GQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLT 808

Query: 602 ---------------------------------ESMKSI-----------------EEFL 611
                                            ++ K++                  E L
Sbjct: 809 FNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEML 868

Query: 612 QKGEVENAIQ-----------GLLEMDFKLNDFQLAPYTIWL---------IGLCQDGQV 651
           +KG +  + Q           G ++  FKL D Q+    I L          GL   G++
Sbjct: 869 KKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKD-QMVALGISLDDAAECAMVRGLALCGKI 927

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           +EA+ I   ++  K I T  +   L+H  CK+
Sbjct: 928 EEAMWILQRMLRMKKIPTTSTFTTLMHVFCKK 959



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 224/519 (43%), Gaps = 90/519 (17%)

Query: 98   SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
            S  F  +I+GY  VGD   A   F +M      P  + Y ++L +  + Q F  A  +  
Sbjct: 525  SVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKL-- 582

Query: 158  EMVKLNCLP---NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
             + KL+C+P   + ++++ LI  +SKSG    A+++ +EM Q  ILP+ +TYT ++SGL 
Sbjct: 583  -LKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 215  QINR------------------------------------ADEAYRLFLKMKDSGCSPDF 238
            +  R                                    +  A  LF +M++ G S D 
Sbjct: 642  REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 239  VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
            +A N++ +G+ ++ +V  A +L+        +P L +++ L+ G  R +     +  Y  
Sbjct: 702  IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 299  MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
            M      P+ + Y  +I GL   G ++  +K+L          D   +N LI+  C++  
Sbjct: 762  MRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIND 821

Query: 359  LDQ----ARSLQV-------------------------------EIWKRDSLPNTHTFTI 383
            LD+      +++V                               E+ K+  +P +  +  
Sbjct: 822  LDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCT 881

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
            ++  MCR G +  A KL ++M   G         A++ GL   G++E+A  +  +M    
Sbjct: 882  MMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRM---- 937

Query: 444  NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                 LR+     ++   ++  T++  +C      +A+ + + +       DI+ YN LI
Sbjct: 938  -----LRMK----KIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLI 988

Query: 504  NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            +  C  G++  AL  ++E++ KGL P+  TY  L++ + 
Sbjct: 989  SACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIS 1027



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/411 (22%), Positives = 173/411 (42%), Gaps = 2/411 (0%)

Query: 29   LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            +S  T+   I K+ N     R F    +   L    + + ++S L++       +  L  
Sbjct: 596  ISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGR 655

Query: 89   LRSGNV-SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            L    + ++ S V+   I G +K G  + AL  F +M+E     D+   N++ +   R  
Sbjct: 656  LMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMG 715

Query: 148  LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
                A ++  +    N +PN+ TF++L++G S+        K+ + M + G  PN+ TY 
Sbjct: 716  KVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYH 775

Query: 208  IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
             +I GLC     +   ++         + D + +N L+   C++  +D+ + L  + E  
Sbjct: 776  SLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVF 835

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
                   +   + D L R       + +  +M ++   P    Y  M++ +   G ++ A
Sbjct: 836  RVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             KL   M   GI  D     A+++G    G +++A  +   + +   +P T TFT L+  
Sbjct: 896  FKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHV 955

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             C+     +A  L   ME       +  +N LI   C  G++  A L FY+
Sbjct: 956  FCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA-LDFYE 1005


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 230/497 (46%), Gaps = 17/497 (3%)

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           + D    N V+N   R +L     +V   M KL   P ++T + LINGL   G    A+ 
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVG 168

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           + D M +     + +TY ++I+GLC+      A     KM++    P+ V Y+ +++G C
Sbjct: 169 LADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLC 228

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           K   V EAL L       G  P L +Y+CLI GL    R+ EA +   +M +  + PD+ 
Sbjct: 229 KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQ 288

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
           +  +++    + GKV  A  ++  M   G  PD + YN+LI  +C    +++A  +   +
Sbjct: 289 MLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
             R  LP+   FT LI G C++  ++ A  L  +M K G  P V  +  LI G C+AG  
Sbjct: 349 VSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRP 408

Query: 430 EKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
             A  LF  M + G+ P L               +   +++  C   L+ +A  +   + 
Sbjct: 409 LAAKELFLNMHKYGQVPNL--------------QTCAVILDGLCKENLLSEAVSLAKAME 454

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
           +S    +I+ Y+ L++G C  G +N A +LF  L  KGL+ +   Y  +I GL +    +
Sbjct: 455 KSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLD 514

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS-GRDDESMKSI 607
            A  +   M +NGC P+   Y   +     +++ + +   +L  +RD     D  + + I
Sbjct: 515 KAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIK-YLTIMRDKGFSVDAATTEFI 573

Query: 608 EEFLQKGEVENAIQGLL 624
             +L   E +  I+  L
Sbjct: 574 INYLSTNEGDTKIREFL 590



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/595 (26%), Positives = 257/595 (43%), Gaps = 91/595 (15%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVI 210
           AL ++  M ++  LP++  F+LL+  + +      AI ++  M +  GI  +  T  IVI
Sbjct: 60  ALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVI 119

Query: 211 SGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           + LC++      + +   M   G  P  +    L+NG C    V +A+ L    EK    
Sbjct: 120 NCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEK---- 175

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
                                   WY          DV  YGV+I GL + G    A+  
Sbjct: 176 -----------------------MWY--------PLDVYTYGVLINGLCKTGDTLAAVGW 204

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M ER   P+   Y+ ++ G C  GL+ +A +L  E+  +   PN  T+  LI G+C 
Sbjct: 205 LRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCN 264

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFL 449
            G   +A  L ++M K G  P + M N L+D  CK G++ +A +++ + +  G+ P +F 
Sbjct: 265 FGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVF- 323

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                        +  +++  YC    +++A ++   +   G LPDI+ + SLI+G+CK 
Sbjct: 324 -------------TYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKD 370

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            NIN A+ L +E+   G  PD  T+ TLI G  +  R   A  +F  M + G  P+    
Sbjct: 371 KNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTC 430

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             ++   C+    S A SL                    + ++K  +             
Sbjct: 431 AVILDGLCKENLLSEAVSL-------------------AKAMEKSNL------------- 458

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
             D  +  Y+I L G+C  G++  A  +FS L      +       +I GLCK+G LD A
Sbjct: 459 --DLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKA 516

Query: 690 MDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            D+ +   +NG +  P  C Y   ++ LL  K+  +   Y  L  M+  G+ +DA
Sbjct: 517 EDLLINMEENGCL--PNNCTYNVFVQGLLTKKEIARSIKY--LTIMRDKGFSVDA 567



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 211/440 (47%), Gaps = 13/440 (2%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+G    G+  +A+     M++     DVY Y  ++N   +    L A+    +M + 
Sbjct: 152 TLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEER 211

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N  PN+V +S +++GL K G    A+ +  EM  +G+ PN  TY  +I GLC   R  EA
Sbjct: 212 NWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEA 271

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M   G  PD    N L++ FCK  +V +A +++      G  P + +Y+ LI  
Sbjct: 272 GSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHI 331

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
                + +EA   +  M      PD+V++  +I G  +   +  AM LL +M + G VPD
Sbjct: 332 YCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPD 391

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              +  LI GFC  G    A+ L + + K   +PN  T  +++ G+C+  ++ +A  L  
Sbjct: 392 VATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAK 451

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            MEK+    ++ +++ L+DG+C AG+L  A  LF  +  GK   + + +           
Sbjct: 452 AMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLP-GKGLQINVYI----------- 499

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               M++  C  G + KA  +L+ + E+G LP+  TYN  + G      I  ++K    +
Sbjct: 500 -YTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIM 558

Query: 523 QLKGLRPDSVTYGTLINGLQ 542
           + KG   D+ T   +IN L 
Sbjct: 559 RDKGFSVDAATTEFIINYLS 578



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 100/220 (45%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  LI G+ K  +  KA+    +M +    PDV  +  ++    +    L A  ++  M
Sbjct: 359 VFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNM 418

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   +PN+ T +++++GL K      A+ +   M +  +  N   Y+I++ G+C   + 
Sbjct: 419 HKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A+ LF  +   G   +   Y  ++ G CK   +D+A  LL + E++G +P   +Y+  
Sbjct: 479 NAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVF 538

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           + GL   K    +  +   M ++    D      +I  LS
Sbjct: 539 VQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLS 578



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 77/196 (39%), Gaps = 1/196 (0%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           TT+     +   P      F+   K  ++ +  + + ++  L K N           +  
Sbjct: 396 TTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEK 455

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
            N+ +   ++ +L+ G    G    A E F  +     Q +VYIY  ++    ++     
Sbjct: 456 SNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDK 515

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +   M +  CLPN  T+++ + GL    +   +IK L  M  +G   +  T   +I+
Sbjct: 516 AEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575

Query: 212 GLCQINRADEAYRLFL 227
            L   N  D   R FL
Sbjct: 576 YL-STNEGDTKIREFL 590


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 216/440 (49%), Gaps = 25/440 (5%)

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
           L ++G+ E   + L+ MT +G +P+    T +I   C+I R   A R+   +++SG   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
             +YN L+N +CK   ++EAL   R  +     P   +Y  ++  L    +  +A     
Sbjct: 139 ANSYNVLINAYCKSGEIEEAL---RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +  + K  PDVV   V+I    +   V  AMKL ++MR +G  PD   YN LIKGFC  G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            LD+A     ++       +  +  +++  +C  G   DA KL   M + GCFPSV  FN
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 418 ALIDGLCKAGELEKA-NLLFYKMEIGKNPTL--FLRLSQG--GNRVHDKA--SLQTMVEQ 470
            LI+ LC+ G L KA N+L    + G  P    F  L QG    +  D+A   L+ MV +
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 471 ---------------YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
                           C  G +  A  IL QL+  G  P +I+YN++I+G  KVG    A
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           ++L +E+  KGL+PD +T  +++ GL R  +  +A + F  +   G  P+  +Y S+M  
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 576 SCRRRKFSLAFSLWLQYLRD 595
            C+ ++ SLA    +  + +
Sbjct: 496 LCKAQQTSLAIDFLVDMVAN 515



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 219/471 (46%), Gaps = 51/471 (10%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI  + K+G  + A    G ++E     D   YN ++N   +      AL V   +   
Sbjct: 109 ALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV---LDHT 165

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           +  PN  T+  ++  L   GK + A+++LD   Q    P+  T T++I   C+ +   +A
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +LF +M+  GC PD V YN L+ GFCK  R+DEA+  L+     G    + S++ ++  
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L    R+ +A      M  +   P VV + ++I  L + G +  A+ +L  M + G  P+
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           +  +N LI+GFC+   +D+A      +  R   P+  T+ IL+  +C++G VDDA  + +
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           ++   GC PS+  +N +IDGL K G+ E A                              
Sbjct: 406 QLSSKGCSPSLISYNTVIDGLLKVGKAELA------------------------------ 435

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
               ++E+ C  GL                 PD+IT  S++ G  + G ++ A+K F  L
Sbjct: 436 --VELLEEMCYKGL----------------KPDLITCTSVVGGLSREGKVHEAIKFFHYL 477

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +  G++P++  Y +++ GL +  +   A      M  NGC P+ A Y +L+
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 191/410 (46%), Gaps = 11/410 (2%)

Query: 1   ESSTLNEVLTILD--TVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRK 58
           +S  + E L +LD  +V P     + +L  L         M+  + Q+         + K
Sbjct: 151 KSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQL---------QSK 201

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
                 + + +I    K +G     +  +E+R          + VLI G+ K G  ++A+
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAI 261

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
               K+  + CQ DV  +N +L        ++ A+ +   M++  C P++VTF++LIN L
Sbjct: 262 IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFL 321

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            + G    A+ +L+ M + G  PN  ++  +I G C     D A      M   GC PD 
Sbjct: 322 CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDI 381

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN LL   CK  +VD+A+ +L      G  P L SY+ +IDGL +  + + A     +
Sbjct: 382 VTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEE 441

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M  + ++PD++    ++ GLS  GKV +A+K    ++  GI P+ + YN+++ G C    
Sbjct: 442 MCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQ 501

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
              A    V++      P   ++T LI G+   G+ ++A KL N++   G
Sbjct: 502 TSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 218/519 (42%), Gaps = 103/519 (19%)

Query: 210 ISGLCQINRA---DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           I  LC++ R    +E  R    M + G  PD VA  AL+  FCK+ R   A  ++   E+
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 267 DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
            G V    SY+ LI+          AY                          ++G++++
Sbjct: 133 SGAVIDANSYNVLIN----------AYC-------------------------KSGEIEE 157

Query: 327 AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
           A+++L       + P+   Y+A++   CD G L QA  +     +    P+  T T+LI 
Sbjct: 158 ALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------- 439
             C+   V  A KLFN+M   GC P V  +N LI G CK G L++A +   K+       
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ---------------YCTAGLIHKAYKIL 484
           ++  +  +   L  GG  +     L TM+ +                C  GL+ KA  +L
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL 334

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             + + G+ P+  ++N LI GFC    I+ A++  + +  +G  PD VTY  L+  L + 
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKD 394

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            + +DA  I  Q+   GC+PS   Y ++                                
Sbjct: 395 GKVDDAVVILSQLSSKGCSPSLISYNTV-------------------------------- 422

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             I+  L+ G+ E A++ L EM +K     L   T  + GL ++G+V EA+  F  L   
Sbjct: 423 --IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL--- 477

Query: 665 KAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNG 700
           K     P+      ++ GLCK     LA+D  +  + NG
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANG 516



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 210/478 (43%), Gaps = 47/478 (9%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
           G RF  +   + ++    + +A+I    K        + +  L      + ++ + VLI+
Sbjct: 88  GSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLIN 147

Query: 107 GYYKVGDCEKALESF----------------------GKMKEF----------DCQPDVY 134
            Y K G+ E+AL                         GK+K+            C PDV 
Sbjct: 148 AYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVV 207

Query: 135 IYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM 194
               +++   ++     A+ ++ EM    C P++VT+++LI G  K G+ + AI  L ++
Sbjct: 208 TCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKL 267

Query: 195 TQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV 254
              G   +  ++ +++  LC   R  +A +L   M   GC P  V +N L+N  C+   +
Sbjct: 268 PSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLL 327

Query: 255 DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVM 314
            +AL +L    K G  P   S++ LI G    K  D A      M      PD+V Y ++
Sbjct: 328 GKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNIL 387

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS 374
           +  L + GKV DA+ +LS +  +G  P    YN +I G   +G  + A  L  E+  +  
Sbjct: 388 LTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGL 447

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-N 433
            P+  T T ++ G+ R G V +A K F+ ++  G  P+  ++N+++ GLCKA +   A +
Sbjct: 448 KPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAID 507

Query: 434 LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
            L   +  G  PT              +AS  T+++     GL  +A K+  +L   G
Sbjct: 508 FLVDMVANGCKPT--------------EASYTTLIKGITYEGLAEEASKLSNELYSRG 551



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 101/429 (23%), Positives = 162/429 (37%), Gaps = 83/429 (19%)

Query: 385 ICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
           +C + RNG +++  +    M   G  P V    ALI   CK G               KN
Sbjct: 76  LCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRT-------------KN 122

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK----------------ILMQLA 488
            T  + + +    V D  S   ++  YC +G I +A +                +L  L 
Sbjct: 123 ATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVAPNAATYDAVLCSLC 182

Query: 489 ESGNL----------------PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
           + G L                PD++T   LI+  CK   +  A+KLF E++ KG +PD V
Sbjct: 183 DRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242

Query: 533 TYGTLINGL---QRVD--------------------------------REEDAFRIFGQM 557
           TY  LI G     R+D                                R  DA ++   M
Sbjct: 243 TYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM 302

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEV 616
            + GC PS   +  L+ + C++     A ++     +     +  S    I+ F  +  +
Sbjct: 303 LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGI 362

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKL 676
           + AI+ L  M  +     +  Y I L  LC+DG+V +A+ I S L       +  S   +
Sbjct: 363 DRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV 422

Query: 677 IHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSV 736
           I GL K G  +LA+++       G       C  ++  L  S++ K   A      +K  
Sbjct: 423 IDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGL--SREGKVHEAIKFFHYLKGF 480

Query: 737 GYDLDACLY 745
           G   +A +Y
Sbjct: 481 GIKPNAFIY 489



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 77/173 (44%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L++   K G  + A+    ++    C P +  YN V++   +     LA+ +  EM
Sbjct: 383 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 P+++T + ++ GLS+ GK   AIK    +   GI PN F Y  ++ GLC+  + 
Sbjct: 443 CYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQT 502

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
             A    + M  +GC P   +Y  L+ G       +EA  L       G V +
Sbjct: 503 SLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKK 555


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 158/669 (23%), Positives = 292/669 (43%), Gaps = 72/669 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +++  Y + GD  +A E+F +M+     P   IY ++++     +    AL+   +M 
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+++ G SK+G  E A    DE  +     N   Y  +I   CQ    +
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M++ G       Y+ +++G+  +    + L + +  ++ GF P + +Y CLI
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    R M EE ++ ++  Y +MI G  +     +A  +  DM + G+ 
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I  FC +G +D+A     E+ K    P T TF  +I G  ++G +  + ++
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNR 457
           F+ M + GC P+V  FN LI+GL +  ++EKA  +  +M    +  N   + ++ QG   
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG--- 668

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                        Y + G   KA++   +L   G   DI TY +L+   CK G +  AL 
Sbjct: 669 -------------YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           + KE+  + +  +S  Y  LI+G  R     +A  +  QM + G  P    Y S ++ +C
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS-AC 774

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            +                                  G++  A Q + EM+       +  
Sbjct: 775 SK---------------------------------AGDMNRATQTIEEMEALGVKPNIKT 801

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAI-VTPPSCVK--LIHGLCKRGYLDLAMDVFL 694
           YT  + G  +    ++AL+ +    E KA+ + P   V   L+  L  R  +    + ++
Sbjct: 802 YTTLIKGWARASLPEKALSCYE---EMKAMGIKPDKAVYHCLLTSLLSRASI---AEAYI 855

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           Y+   G +    +C  ++ + L       VH    LC++++ G +L   L    +   P 
Sbjct: 856 YS---GVMT---ICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETL----QKTFPP 905

Query: 755 PWNTREMEN 763
            W++    +
Sbjct: 906 DWSSHHHHH 914



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 198/450 (44%), Gaps = 21/450 (4%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +     ++  ++ GY  V D +K L  F ++KE    P V  Y  ++N+  +  
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M +     N+ T+S++ING  K      A  + ++M + G+ P+   Y 
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +IS  C +   D A +   +M+     P    +  +++G+ K   +  +L +     + 
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G VP + +++ LI+GL   ++ ++A     +M    +  +   Y  +++G +  G    A
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + ++  G+  D + Y AL+K  C  G +  A ++  E+  R+   N+  + ILI G
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPT 446
             R G V +A  L  +M+K G  P +  + + I    KAG++ +A     +ME +G  P 
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T+++ +  A L  KA     ++   G  PD   Y+ L+   
Sbjct: 799 I--------------KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844

Query: 507 CKVGNI------NGALKLFKELQLKGLRPD 530
               +I      +G + + KE+   GL  D
Sbjct: 845 LSRASIAEAYIYSGVMTICKEMVEAGLIVD 874



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 159/376 (42%), Gaps = 55/376 (14%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS        D   QT+ E++       +  F  +I GY K GD  ++LE F  M+   
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P V+ +N                                    LINGL +  + E A+
Sbjct: 620 CVPTVHTFNG-----------------------------------LINGLVEKRQMEKAV 644

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++LDEMT  G+  N+ TYT ++ G   +    +A+  F ++++ G   D   Y ALL   
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704

Query: 249 CKLRRVDEALALL-----RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           CK  R+  ALA+      R+  ++ FV     Y+ LIDG  R     EA    ++M +E 
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFV-----YNILIDGWARRGDVWEAADLIQQMKKEG 759

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++PD+  Y   I   S+AG +  A + + +M   G+ P+   Y  LIKG+    L ++A 
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA------QKLFNKMEKAGCFPSVGMFN 417
           S   E+      P+   +  L+  +     + +A        +  +M +AG    +G   
Sbjct: 820 SCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAV 879

Query: 418 ALIDGLCK----AGEL 429
                LCK     GEL
Sbjct: 880 HWSKCLCKIEASGGEL 895



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L++    +   + LDE+    VS     +  ++ GY  VGD  KA E F +++ 
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D++ Y A+L    +      ALAV  EM   N   N   +++LI+G ++ G    
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  ++ +M + G+ P+  TYT  IS   +    + A +   +M+  G  P+   Y  L+ 
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           G+ +    ++AL+     +  G  P    Y CL+  L       EAY +
Sbjct: 808 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIY 856


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 218/426 (51%), Gaps = 23/426 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A++ ++ +L       TF++++  L  +GK   A+++L +M +    PN  TY  VI+
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 212 GLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           G C   R   A  +  +M++  G +PD   Y  L++G+CK+ R+++A+ +       G V
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 271 -PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P    Y+ LI G     + D A  +   M +  I   V  Y +++  L    +  DA  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV--EIWKRDSLPNTHTFTILICG 387
           +L +M++ G  PD + YN LI G+C  G  ++ ++L+V  E+ ++       T+T LI  
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCKEG--NEKKALEVFEEMSQKGVRATAVTYTSLIYV 333

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             R G V +  +LFN   K G  P V M+NALI+  C  G++E+A  +  +ME  + P  
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP- 392

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                       D  +  T++  +C  G + +A  ++ ++ + G  PD+++YN+LI+G+ 
Sbjct: 393 ------------DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYS 440

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
             G+I  AL++  E+  KG  P  +TY  LI GL ++ + +DA  +  +M   G TP  +
Sbjct: 441 MKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDS 500

Query: 568 VYKSLM 573
            Y SL+
Sbjct: 501 TYISLI 506



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 179/342 (52%), Gaps = 2/342 (0%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  +I+G+   G  + ALE   +M+E     PD Y Y  +++   +      A+ V+ E
Sbjct: 149 TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDE 208

Query: 159 MV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           M+ K    P+ V ++ LI G    GK +VA++  ++M QRGI     TY +++  L    
Sbjct: 209 MLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDA 268

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           RA +AY +  +M+ +G SPD   YN L+NG+CK     +AL +     + G      +Y+
Sbjct: 269 RASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYT 328

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI    R  +  E    +    ++ I PDVV+Y  +I      G ++ A +++++M ++
Sbjct: 329 SLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKK 388

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I PD   YN L++GFC LG LD+AR+L  E+ KR   P+  ++  LI G    G + DA
Sbjct: 389 RIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDA 448

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
            ++ ++M   G  P++  +NALI GLCK  + + A  L  +M
Sbjct: 449 LRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEM 490



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 198/410 (48%), Gaps = 21/410 (5%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           T+ I++  LC   +   A  L  +M      P+ V YN ++ GFC   RV  AL ++R  
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 265 -EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
            E+ G  P   +Y+ LI G  +  R ++A   + +M  + ++ P  V+Y  +I G  + G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
           K+  A++   DM +RGI      YN L+           A ++  E+ K    P+  T+ 
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 383 ILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-YKMEI 441
           ILI G C+ G    A ++F +M + G   +   + +LI    + G++++ + LF   ++ 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 442 GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNS 501
           G  P              D      ++  +CT G + +AY+I+ ++ +    PD +TYN+
Sbjct: 354 GIRP--------------DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399

Query: 502 LINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG 561
           L+ GFC +G ++ A  L  E+  +G++PD V+Y TLI+G       +DA R+  +M   G
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459

Query: 562 CTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
             P+   Y +L+   C+ R+   A +L  + +      DD +  S+ E L
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 1/306 (0%)

Query: 84  QTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  DE L  G V+  + ++  LI GY  VG  + AL+    M +      V  YN +++ 
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
            F       A AV  EM K    P++ T+++LING  K G  + A+++ +EM+Q+G+   
Sbjct: 264 LFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRAT 323

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TYT +I    +  +  E  RLF      G  PD V YNAL+N  C    ++ A  ++ 
Sbjct: 324 AVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMA 383

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
             EK    P   +Y+ L+ G     R DEA     +M +  I+PD+V Y  +I G S  G
Sbjct: 384 EMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKG 443

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFT 382
            +KDA+++  +M ++G  P    YNALI+G C +   D A +L  E+  +   P+  T+ 
Sbjct: 444 DIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYI 503

Query: 383 ILICGM 388
            LI G+
Sbjct: 504 SLIEGL 509



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 2/347 (0%)

Query: 84  QTLDELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLN 141
           + + E+R  G ++     +  LISG+ K+G  E A++ F +M  + +  P   +YNA++ 
Sbjct: 168 EVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIG 227

Query: 142 IAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILP 201
                    +AL    +MV+      + T++LL++ L    +   A  +L+EM + G  P
Sbjct: 228 GYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP 287

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALL 261
           + FTY I+I+G C+     +A  +F +M   G     V Y +L+  F +  +V E   L 
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF 347

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
               K G  P +  Y+ LI+        + AY    +M +++I PD + Y  ++RG    
Sbjct: 348 NVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLL 407

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G++ +A  L+ +M +RGI PD   YN LI G+   G +  A  ++ E+  +   P   T+
Sbjct: 408 GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTY 467

Query: 382 TILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
             LI G+C+    DDA+ L  +M   G  P    + +LI+GL    E
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 55/427 (12%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+A +  ++  ++      + +M+R L   GK   A++LL  M      P+   YN +I 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 352 GFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGC 409
           GFC  G +  A  +  E+ +R  + P+ +T+  LI G C+ G ++DA K+F++M  K   
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PS  M+NALI G C  G+L+ A  L Y+ +          + Q G  +   A+   ++ 
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVA--LQYRED----------MVQRGIAM-TVATYNLLMH 262

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                     AY +L ++ ++G  PD+ TYN LING+CK GN   AL++F+E+  KG+R 
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            +VTY +LI    R  + ++  R+F    + G  P   +Y +L+   C       A+ + 
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382

Query: 590 LQYLR------DIS-----------GRDDESMKSIEEFLQ-------------------K 613
            +  +      D++           GR DE+   I+E  +                   K
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G++++A++   EM  K  +  L  Y   + GLC+  Q  +A N+   +V         + 
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502

Query: 674 VKLIHGL 680
           + LI GL
Sbjct: 503 ISLIEGL 509



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 131/275 (47%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D+  Q  +++    +++    + +L+   +       A     +M++    PDV+ YN 
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           ++N   ++     AL V+ EM +       VT++ LI   S+ G+ +   ++ +   ++G
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           I P+   Y  +I+  C     + AY +  +M+     PD + YN L+ GFC L R+DEA 
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            L+    K G  P L SY+ LI G        +A     +M ++   P ++ Y  +I+GL
Sbjct: 415 TLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGL 474

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
            +  +  DA  L+ +M  +GI PD   Y +LI+G 
Sbjct: 475 CKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 121/237 (51%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           +  L+E++    S     + +LI+GY K G+ +KALE F +M +   +     Y +++ +
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYV 333

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             RK        ++   VK    P++V ++ LIN     G  E A +++ EM ++ I P+
Sbjct: 334 FSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPD 393

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY  ++ G C + R DEA  L  +M   G  PD V+YN L++G+     + +AL +  
Sbjct: 394 DMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRD 453

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
                GF P L +Y+ LI GL + ++ D+A    ++M  + I PD   Y  +I GL+
Sbjct: 454 EMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLT 510



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 21/281 (7%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C  G   +A ++L Q+      P+ +TYN++I GFC  G +  AL++ +E+
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 523 QLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRR 580
           + +G + PD  TY TLI+G  ++ R EDA ++F +M   G   PS  +Y +L+   C   
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG-----EVENAIQGLLEMDFKLNDFQL 635
           K  +A    LQY  D+  R      +    L           +A   L EM        +
Sbjct: 234 KLDVA----LQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDV 289

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             Y I + G C++G  K+AL +F  + +     T  +   LI+   ++G +     +F  
Sbjct: 290 FTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349

Query: 696 TLKNGFILRPRVC--NYLLRSLLFSKDNKKVHAYHLLCRMK 734
            +K G  +RP V   N L+ S     D ++  AY ++  M+
Sbjct: 350 AVKKG--IRPDVVMYNALINSHCTGGDMER--AYEIMAEME 386



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 35/220 (15%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T++  V  +    Q   R F  A K+         +A+I+        +  ++ + E
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    +      +  L+ G+  +G  ++A     +M +   QPD+  YN           
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT---------- 434

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
                                    LI+G S  G  + A+++ DEM  +G  P   TY  
Sbjct: 435 -------------------------LISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +I GLC+I + D+A  L  +M   G +PD   Y +L+ G 
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 224/487 (45%), Gaps = 49/487 (10%)

Query: 123  KMKEFDCQPDVYIYNAVLNIAFR--KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSK 180
            +M E   +P +  YN +L+   +  ++  +  L    E     CLPN VT++++I GL++
Sbjct: 1109 EMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTR 1168

Query: 181  SGKTEVAIKMLD----------------------------------EMTQRGILPNKFTY 206
             G  E A ++++                                  EM   GI+P   TY
Sbjct: 1169 KGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 1228

Query: 207  TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
              +I GL Q    + A   F +M+  G  PD + YN+LLNG+CK   + EAL L     +
Sbjct: 1229 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRR 1288

Query: 267  DGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKD 326
             G  P + +Y+ LIDG  R    +EA     +M E+   P+V  Y ++++G      +  
Sbjct: 1289 AGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAM 1348

Query: 327  AMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILIC 386
            A +   +M  +G+ PD + YN  I     LG + +A  L+  +       +T T+ ILI 
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIH 1408

Query: 387  GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT 446
            G+C+ G + DA++L  KM   G  P    +  LI   C+ G L +A  +F  M       
Sbjct: 1409 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM------- 1461

Query: 447  LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                +S G   +    +   ++  YC  G ++ AY    ++ E G  P+ ITYN LI+  
Sbjct: 1462 ----ISDG--LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515

Query: 507  CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
            C++G    A   F E+  +GL  +  TY  LI+G  +V   EDA R + +M QNG  P  
Sbjct: 1516 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 1575

Query: 567  AVYKSLM 573
              +K+L+
Sbjct: 1576 LTHKALL 1582



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 227/483 (46%), Gaps = 18/483 (3%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRS-GNVSVVSDVFF-VLISGYYKVGDCEKALE 119
            S  + + ++   LK    D     L E+ + G+  + +DV + V+I+G  + GD E+A E
Sbjct: 1118 SIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAE 1177

Query: 120  SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
                M+    +   + YN ++     +        +  EM     +P +VT++ +I+GL 
Sbjct: 1178 LVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 1236

Query: 180  KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
            +SG  E A     EM   G+LP+  TY  +++G C+     EA  LF  ++ +G +P  +
Sbjct: 1237 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 1296

Query: 240  AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
             YN L++G+C+L  ++EA  L     + G +P + +Y+ L+ G    +    A  ++ +M
Sbjct: 1297 TYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEM 1356

Query: 300  FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
              + ++PD   Y   I      G +  A +L   +   GI  DT  YN LI G C  G L
Sbjct: 1357 LSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNL 1416

Query: 360  DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
              A+ LQ+++      P+  T+T LI   C  G++ +A+K+FN M   G  PS   F  +
Sbjct: 1417 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 1476

Query: 420  IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
            I   C+ G L  A   F KM E G  P              ++ +   ++   C  G   
Sbjct: 1477 IHAYCRRGNLYSAYGWFRKMLEEGVEP--------------NEITYNVLIHALCRMGRTQ 1522

Query: 479  KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
             A     ++ E G + +  TY  LI+G CKVGN   A++ + E+   G+ PD +T+  L+
Sbjct: 1523 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582

Query: 539  NGL 541
             G 
Sbjct: 1583 KGF 1585



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 247/543 (45%), Gaps = 50/543 (9%)

Query: 118  LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
            L +F +M      PDV   N VL +      +    AV+ EM++L   P+IVT++ L++ 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 178  LSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
              K G+ +    +L EM  RG   LPN  TY +VI+GL +    +EA  L   M+ S  +
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 236  PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
              F  YN L+ G      V +   L    E +G +P + +Y+ +I GL ++   + A   
Sbjct: 1189 SSFT-YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            + +M    + PDV+ Y  ++ G  +AG +K+A+ L  D+R  G+ P    YN LI G+C 
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 356  LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            LG L++AR L+ E+ ++  LPN  T+TIL+ G      +  A++ F++M   G  P    
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 416  FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            +N  I      G++ +A   F   E+     L L          D  +   ++   C  G
Sbjct: 1368 YNTRICAELILGDIARA---FELREV-----LMLEGISS-----DTVTYNILIHGLCKTG 1414

Query: 476  LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
             +  A ++ M++  +G  PD ITY  LI+  C+ G +  A K+F  +   GL P +VT+ 
Sbjct: 1415 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 1474

Query: 536  TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             +I+   R      A+  F +M + G  P+   Y  L+   CR                 
Sbjct: 1475 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM---------------- 1518

Query: 596  ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
              GR   +     E L++G V N                   YT+ + G C+ G  ++A+
Sbjct: 1519 --GRTQLASHHFHEMLERGLVANKYT----------------YTLLIDGNCKVGNWEDAM 1560

Query: 656  NIF 658
              +
Sbjct: 1561 RFY 1563



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 254/582 (43%), Gaps = 65/582 (11%)

Query: 151  LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
            L L+ + EM      P++   + ++  L  + + +    + +EM + GI P+  TY  ++
Sbjct: 1067 LCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLL 1126

Query: 211  SGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
                +  R D+   L  +M  + SGC P+ V YN ++ G  +   ++EA  L+       
Sbjct: 1127 DSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK 1186

Query: 269  FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                  +Y+ LI GL       + Y    +M  E I P VV Y  MI GL ++G V+ A 
Sbjct: 1187 KASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 1245

Query: 329  KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
               ++MR  G++PD   YN+L+ G+C  G L +A  L  ++ +    P   T+ ILI G 
Sbjct: 1246 VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGY 1305

Query: 389  CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
            CR G +++A+ L  +M + GC P+V  +  L+ G      L  A   F +M   G  P  
Sbjct: 1306 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDC 1365

Query: 448  FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            F              +  T +      G I +A+++   L   G   D +TYN LI+G C
Sbjct: 1366 F--------------AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLC 1411

Query: 508  KVGNINGALKLFKELQLK----GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            K GN+  A    KELQ+K    GL+PD +TY  LI+         +A +IF  M  +G  
Sbjct: 1412 KTGNLKDA----KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 1467

Query: 564  PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
            PS   +  ++   CRR     A+  W +             K +EE ++  E+       
Sbjct: 1468 PSAVTFTVIIHAYCRRGNLYSAYG-WFR-------------KMLEEGVEPNEIT------ 1507

Query: 624  LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                          Y + +  LC+ G+ + A + F  ++E   +    +   LI G CK 
Sbjct: 1508 --------------YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 1553

Query: 684  GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            G  + AM  +    +NG  + P   +YL    L    +  VH
Sbjct: 1554 GNWEDAMRFYFEMHQNG--IHP---DYLTHKALLKGFDGHVH 1590



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 208/480 (43%), Gaps = 75/480 (15%)

Query: 296  YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            +R+M    + PDV     ++R L +A +  D   +  +M E GI P    YN L+  F  
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 356  LGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKLFNKM---EKAGCF 410
             G  D+   L  E+  R S  LPN  T+ ++I G+ R G +++A +L   M   +KA  F
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 1191

Query: 411  PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
                 +N LI GL   G ++K   L  +ME  G  PT+               +   M+ 
Sbjct: 1192 ----TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV--------------VTYNAMIH 1233

Query: 470  QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                +GL+  A     ++   G LPD+ITYNSL+NG+CK GN+  AL LF +L+  GL P
Sbjct: 1234 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 1293

Query: 530  DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
              +TY  LI+G  R+   E+A  +  +M + GC P+   Y  LM  S   R  ++A   +
Sbjct: 1294 TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFF 1353

Query: 590  LQYLRD-----------------ISGRDDESMKSIEEFLQKGEVENA------IQGLL-- 624
             + L                   I G    + +  E  + +G   +       I GL   
Sbjct: 1354 DEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKT 1413

Query: 625  -------EMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
                   E+  K+    L P    YT  +   C+ G ++EA  IF+ ++    + +  + 
Sbjct: 1414 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 1473

Query: 674  VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRM 733
              +IH  C+RG L  A   F   L+ G  + P    Y          N  +HA   LCRM
Sbjct: 1474 TVIIHAYCRRGNLYSAYGWFRKMLEEG--VEPNEITY----------NVLIHA---LCRM 1518


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 229/440 (52%), Gaps = 20/440 (4%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS-FASNSAVISMLLKPNGFDLYWQTL 86
           FL    V SVI +  +  +  +FF W++K++  R      + ++  L++        +T 
Sbjct: 8   FLEPRLVGSVIRRVPSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRAR------RTR 61

Query: 87  DELRSGNVSVVSDV------FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           + +R     + +        F ++I  +  V +  +A    G M+     PDV  YN VL
Sbjct: 62  EAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVL 121

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
                      AL  + +M K  C PN+ T++ +INGL K GK + A+ +   +    + 
Sbjct: 122 KGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVD 180

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P+ FTY+ ++ GLCQ  R + A +++  M ++    D  AYNA+ +GFCK RRVDEAL +
Sbjct: 181 PDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEV 240

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAK-RYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L++  +    P + +Y+C+I+G+ + K R +EAY  +++M      P+ V YG MI GLS
Sbjct: 241 LKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLS 300

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +  +V+  ++L   M + G+ PD Y Y++LI  F  +  LD+A+S+  +  +    P+ +
Sbjct: 301 KIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVY 360

Query: 380 TFTILICGMC--RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF- 436
            +T LI G C  R   VD+A  LF  M+    +P+V  +N ++ GLCK G  ++A  +F 
Sbjct: 361 MYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQ 420

Query: 437 --YKMEIGKNPTLFLRLSQG 454
             +K++   N   F  ++ G
Sbjct: 421 EMFKVKCSPNRMTFKVMTMG 440



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 208/412 (50%), Gaps = 23/412 (5%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++  ++ L++ L ++ +T  A++           P+ +++TI+I   C +     A+R  
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYSCLIDGLF 284
             M+  G  PD  AYN +L G+C L RV  AL     F K G    P + +Y+ +I+GL 
Sbjct: 103 GYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALI---KFGKMGKTCKPNVATYNTVINGLC 159

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY 344
           +  + D A   + ++  + ++PD   Y  ++ GL +A +++ A+K+   M E     D  
Sbjct: 160 KFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG 219

Query: 345 CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR-NGMVDDAQKLFNK 403
            YNA+  GFC    +D+A  +   + +R   P+  T+  +I G+C+    +++A +LF +
Sbjct: 220 AYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQ 279

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKA 462
           M  + C P+   +  +I GL K  E+++   LF  M + G +P              D  
Sbjct: 280 MVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSP--------------DGY 325

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV--GNINGALKLFK 520
           +  +++  +     + +A  IL   A +   PD+  Y +LI+G+C+     ++ AL LF+
Sbjct: 326 AYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            ++ + + P+ +TY  ++ GL +  R ++A++IF +M +  C+P+   +K +
Sbjct: 386 NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 194/436 (44%), Gaps = 23/436 (5%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           DVY Y  +L+   R +    A+  +   +  +C P++ +F+++I           A + L
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
             M   GI P+   Y +V+ G C + R   A   F KM  + C P+   YN ++NG CK 
Sbjct: 103 GYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKF 161

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
            ++D A+ L      D   P   +YS L+ GL +A+R + A   Y  M E   + D   Y
Sbjct: 162 GKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAY 221

Query: 312 GVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL-GLLDQARSLQVEIW 370
             M  G  +  +V +A+++L  M +R   P    YN +I G C     +++A  L  ++ 
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMV 281

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
             D  PN  T+  +I G+ +   V    +LF  M KAG  P    +++LI    K  +L+
Sbjct: 282 GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLD 341

Query: 431 KANLLFYKMEIGKNPTLFLRLSQGGNRVH---DKASLQTMVEQYCTA--GLIHKAYKILM 485
           +A  +                 Q   R H   D     T++  YC A    + +A  +  
Sbjct: 342 EAKSIL----------------QDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQ 385

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + +    P++ITYN ++ G CK G  + A ++F+E+      P+ +T+  +  G+    
Sbjct: 386 NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCR 445

Query: 546 REEDAFRIFGQMPQNG 561
           + +   RIF  M   G
Sbjct: 446 KTDKFERIFMDMVYKG 461



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 189/424 (44%), Gaps = 45/424 (10%)

Query: 32  TTVTSVIMKTKNPQVGFRFF---IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           T +   +++ +  +   RFF   + A  R  L SF   + +I            W+ L  
Sbjct: 48  TRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSF---TIIIQCFCNVRNPGRAWRYLGY 104

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +RS  +      + V++ GY  +G   +AL  FGKM +  C+P+V  YN V+N   +   
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK-TCKPNVATYNTVINGLCKFGK 163

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD---------------- 192
              A+ ++  +      P+  T+S L++GL ++ + E AIK+ D                
Sbjct: 164 IDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNA 223

Query: 193 -------------------EMTQRGILPNKFTYTIVISGLCQI-NRADEAYRLFLKMKDS 232
                               M QR   P+  TY  +I+G+CQ  NR +EAYRLF +M  S
Sbjct: 224 MADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGS 283

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
            C P+ V Y  ++ G  K+  V   L L +   K G  P   +Y  LI    + ++ DEA
Sbjct: 284 DCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEA 343

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK--VKDAMKLLSDMRERGIVPDTYCYNALI 350
            +  +      + PDV +Y  +I G   A K  V +A+ L  +M++R + P+   YN ++
Sbjct: 344 KSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVL 403

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
           +G C  G  D+A  +  E++K    PN  TF ++  GM      D  +++F  M   G +
Sbjct: 404 RGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKGRW 463

Query: 411 PSVG 414
              G
Sbjct: 464 QGEG 467



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 198/425 (46%), Gaps = 26/425 (6%)

Query: 251 LRRVDEALALLRSF-----EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +RRV  +LAL R F     +++G+   +  Y+ L+  L RA+R  EA  ++++       
Sbjct: 18  IRRV-PSLALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCR 76

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P +  + ++I+          A + L  MR  GI PD   YN ++KG+CDLG + +A  +
Sbjct: 77  PSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA-LI 135

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           +     +   PN  T+  +I G+C+ G +D A  LF ++      P    ++ L+ GLC+
Sbjct: 136 KFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQ 195

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           A  LE A +  Y M +  N               D  +   M + +C    + +A ++L 
Sbjct: 196 AERLEAA-IKVYDMMLEANYD------------GDAGAYNAMADGFCKERRVDEALEVLK 242

Query: 486 QLAESGNLPDIITYNSLINGFCKVGN-INGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            + +    P ++TYN +ING C+  N I  A +LF+++      P++VTYGT+I GL ++
Sbjct: 243 TMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKI 302

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              +    +F  M + G +P    Y SL+    + RK   A S+     R+  G D    
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMY 362

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSV 660
            ++     +       + LL     + D ++ P    Y I L GLC+ G+  EA  IF  
Sbjct: 363 TTLISGYCRARKPRVDEALLLFQ-NMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQE 421

Query: 661 LVECK 665
           + + K
Sbjct: 422 MFKVK 426



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 153/363 (42%), Gaps = 50/363 (13%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLL 435
           + + +T L+  + R     +A + F +   A C PS+  F  +I   C      +A   L
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-- 493
            Y   +G  P              D  +   +++ YC  G + +A   L++  + G    
Sbjct: 103 GYMRSLGIPP--------------DVTAYNVVLKGYCDLGRVGRA---LIKFGKMGKTCK 145

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRI 553
           P++ TYN++ING CK G I+ A+ LF  L    + PD  TY TL++GL + +R E A ++
Sbjct: 146 PNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKV 205

Query: 554 FGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESMKSIEEFLQ 612
           +  M +         Y ++    C+ R+   A    L+ L+  I  R   S+ +    + 
Sbjct: 206 YDMMLEANYDGDAGAYNAMADGFCKERRVDEA----LEVLKTMIQRRCKPSVVTYNCIIN 261

Query: 613 -----KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
                K  +E A +   +M           Y   ++GL +  +V+  L +F  +   KA 
Sbjct: 262 GVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGM--SKAG 319

Query: 668 VTPPSCV--KLIHGLCKRGYLDLAM-------------DVFLY-TLKNGF--ILRPRVCN 709
           ++P       LI+   K   LD A              DV++Y TL +G+    +PRV  
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 710 YLL 712
            LL
Sbjct: 380 ALL 382


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 217/424 (51%), Gaps = 19/424 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A++ +M +L       TF++++  L  +GK   A+++L +M +    PN  TY  VI+
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 212 GLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           G C   R   A  +  +M++  G +P+   Y  +++G+CK+ RVDEA+ +       G V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 271 -PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P    Y+ LI G     + D A  +  +M E  +   V  Y +++  L   G+  +A +
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L+ +M  +G+ PD + YN LI G C  G + +A  +   + +R       T+T LI  + 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G V +  KLF++  + G  P + ++NALI+    +G +++A  +  +ME  +      
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR------ 756

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  T++   C  G + +A K++ ++ E G  PD++TYN+LI+G+   
Sbjct: 757 -------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 809

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++  AL++  E+  KG  P  +TY  LI GL +  + +DA  +  +M +NG TP  + Y
Sbjct: 810 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 869

Query: 570 KSLM 573
            SL+
Sbjct: 870 ISLI 873



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 240/516 (46%), Gaps = 27/516 (5%)

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           +  V   +KAL     +   D  P   + N +L  +   +    +L +Y  M  L+   +
Sbjct: 393 FKSVLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS 451

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             +   L++ L  +     A  +  +M +  +     T+ I++  LC   +   A  L  
Sbjct: 452 TASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR 507

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRA 286
           +M      P+ V YN ++ GFC   RV  AL ++R   E+ G  P   +Y  +I G  + 
Sbjct: 508 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 287 KRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            R DEA   + +M  + +++P+ V+Y  +I G  + GK+  A+     M ERG+      
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+      G   +A  L  E+  +   P+  T+ ILI G C+ G V  A ++F  M 
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASL 464
           + G   +V  + ALI  L K G++++ + LF + +  G  P L L               
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL--------------Y 729

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  + T+G I +A++I+ ++ +    PD +TYN+L+ G C +G ++ A KL  E+  
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 789

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G++PD VTY TLI+G       +DA RI  +M   G  P+   Y +L+   C+  +   
Sbjct: 790 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 849

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           A ++  + + +    DD +  S+ E L   E E AI
Sbjct: 850 AENMVKEMVENGITPDDSTYISLIEGLTT-EDERAI 884



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 183/360 (50%), Gaps = 5/360 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  +I+G+   G  + AL+   +M+E     P+ Y Y  V++   +      A+ V+ E
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575

Query: 159 MV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           M+ K    P  V ++ LI G    GK + A+   D M +RG+     TY +++  L    
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R  EAY L  +M   G +PD   YN L+NG CK   V +AL +  +  + G    + +Y+
Sbjct: 636 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 695

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI  L +  +  E    + +     I PD+VLY  +I   S +G +  A +++ +M ++
Sbjct: 696 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I PD   YN L++G C LG +D+AR L  E+ +R   P+  T+  LI G    G V DA
Sbjct: 756 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 815

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP--TLFLRLSQG 454
            ++ N+M   G  P++  +NALI GLCK G+ + A N++   +E G  P  + ++ L +G
Sbjct: 816 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 176/343 (51%), Gaps = 2/343 (0%)

Query: 88  ELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFR 145
           E+R  G ++     +  +ISG+ KVG  ++A++ F +M  + + +P+  +YNA++     
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           +     AL     MV+      + T++LL++ L   G+   A ++++EM  +G+ P+ FT
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y I+I+G C+     +A  +F  M   G     V Y AL+    K  +V E   L     
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P L  Y+ LI+    +   D A+    +M +++I PD V Y  ++RGL   G+V 
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
           +A KL+ +M ERGI PD   YN LI G+   G +  A  ++ E+  +   P   T+  LI
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
            G+C+NG  DDA+ +  +M + G  P    + +LI+GL    E
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 20/413 (4%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+A +  MF  ++      + +M+R L  AGK   A++LL  M      P+   YN +I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 352 GFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGC 409
           GFC  G +  A  +  E+ +R  + PN +T+  +I G C+ G VD+A K+F++M  K   
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P   M+NALI G C  G+L+ A LL+    + +   + +            A+   +V 
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTA-LLYRDRMVERGVAMTV------------ATYNLLVH 629

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G   +AY+++ ++   G  PD+ TYN LING CK GN+  AL++F+ +  +G+R 
Sbjct: 630 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 689

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             VTY  LI  L +  + ++  ++F +  + G  P   +Y +L+           AF + 
Sbjct: 690 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 749

Query: 590 LQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +  +     DD +  ++   L   G V+ A + + EM  +     L  Y   + G    
Sbjct: 750 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 809

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           G VK+AL I + ++      T  +   LI GLCK G  D A ++    ++NG 
Sbjct: 810 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 862



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 155/321 (48%), Gaps = 1/321 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           VIS   K    D   +  DE L  G V   + ++  LI GY   G  + AL    +M E 
Sbjct: 556 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 615

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
                V  YN +++  F       A  +  EM      P++ T+++LING  K G  + A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +++ + M++RG+     TYT +I  L +  +  E  +LF +    G  PD V YNAL+N 
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
                 +D A  ++   EK    P   +Y+ L+ GL    R DEA     +M E  I+PD
Sbjct: 736 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  +I G S  G VKDA+++ ++M  +G  P    YNALI+G C  G  D A ++  
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 855

Query: 368 EIWKRDSLPNTHTFTILICGM 388
           E+ +    P+  T+  LI G+
Sbjct: 856 EMVENGITPDDSTYISLIEGL 876



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 51/272 (18%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C+AG   +A ++L Q+      P+ +TYN++I GFC  G +  AL + +E+
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540

Query: 523 QLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRR 580
           + +G + P+  TYGT+I+G  +V R ++A ++F +M   G   P   +Y +L+   C + 
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 581 KFSLA------------------FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           K   A                  ++L +  L  + GR  E+ + +EE   KG        
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALF-MDGRGTEAYELVEEMGGKG-------- 651

Query: 623 LLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                       LAP    Y I + G C++G VK+AL IF  +       T  +   LI+
Sbjct: 652 ------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            L K+G +     +F   ++ G  +RP +  Y
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRG--IRPDLVLY 729



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 1/198 (0%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ T +   + K    Q   + F  A +R         +A+I+        D  ++ + E
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +    ++     +  L+ G   +G  ++A +   +M E   QPD+  YN +++    K  
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
              AL +  EM+     P ++T++ LI GL K+G+ + A  M+ EM + GI P+  TY  
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871

Query: 209 VISGL-CQINRADEAYRL 225
           +I GL  +  RA +  RL
Sbjct: 872 LIEGLTTEDERAIDDERL 889


>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
 gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
          Length = 949

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 270/585 (46%), Gaps = 44/585 (7%)

Query: 100 VFFVLISGYYKVG----DCEKALESFGKMKEFDCQPDVYIYNAVL----NIAFRKQLFLL 151
           V F+ I+ ++  G       KAL++  K+   DC   +   +++     N++ +K+    
Sbjct: 329 VMFISIARFFPKGWVVLFVRKALKAVAKL---DCGAKLLELSSLAGGCSNMSLQKE---- 381

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  +  E+V  N LP  +  +L+I  +   G+ +V+  +L ++   G  P+  TY IVI 
Sbjct: 382 ADHLLDEIVTSNVLPVNIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIK 441

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+ NR D+A  L   M+  G  PD    + ++  +CK+  ++ AL L     KDG  P
Sbjct: 442 CLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEP 501

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  Y  +I  L R +R  EA A  R+M  E + PD ++Y  +I G S   + ++  ++ 
Sbjct: 502 SIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIF 561

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +M +RG+ P  + Y +LI G      + +A      + +    P T  +T+LI    R 
Sbjct: 562 DEMLKRGLQPGPHAYGSLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRK 621

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK-----------AGELEKANLLFYKME 440
           G V     L   M K    P +  + AL+ G+C+           A +L++A  + ++M 
Sbjct: 622 GDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRM- 680

Query: 441 IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYN 500
                     L Q    + D  + +    Q CT  +I  A  I+  L E+G +PD+  YN
Sbjct: 681 ----------LPQ----IIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYN 726

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN 560
            +ING C+   ++ A  L   +   G+ P+ VTY  L+N   R+     A ++F  +  +
Sbjct: 727 GMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSD 786

Query: 561 GCTPSPAVYKSLMTW--SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVEN 618
           GC      Y + +       R K +L+F L + + R          K +E  L +  ++ 
Sbjct: 787 GCVFDKITYNTFIKGLSLAGRMKEALSF-LLMMHKRGFVPSKASYDKLMELLLAENAIDI 845

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            +Q   +M F+    + A YT  L+ L +DG+  EA  IF+++++
Sbjct: 846 VLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLK 890



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 267/598 (44%), Gaps = 34/598 (5%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL-SKSGKTEVAIK 189
           PD  + +A++    R      AL+ ++ +V+    P+  + + L+  + S S  TE    
Sbjct: 45  PDPAVSDALVACHSRLGDISSALSHFHRLVQSGAAPSPASTAALLRAMCSASMSTEAMDV 104

Query: 190 MLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFC 249
           ++  M     LP    + ++I GLC     D+A  LF  M  SG +P    Y +L   +C
Sbjct: 105 LVLSMGNPSPLPVS-DFALLIPGLCSEGAVDKARFLFDAMLRSGLTPPVRVYRSLAFAYC 163

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM-FEEKIEPDV 308
           K RR  +A  + +     G        + LI    R  R + A   +R+M  +E ++ D 
Sbjct: 164 KARRSLDASDMCQLMLIKGMYLDRELSTALIRVFCREGRLEPALDVFRRMKGDEHVQLDA 223

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             Y  MI GL E G+V   +++  +M +RGI PD   YN +I+ +C    +  A  +   
Sbjct: 224 YAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKV 283

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF------------ 416
           + +    P+   +TIL+  +C++G + +A+ LF+KM ++G FP   MF            
Sbjct: 284 MIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARFFPKGWV 343

Query: 417 --------NALIDGLCKAGELEKANLL--FYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
                    A+    C A  LE ++L      M + K     L      N +     L  
Sbjct: 344 VLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPVNIVLNL 403

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           M+   C+ G +  +Y +L +L   G  P ++TYN +I   C+   ++ A  L   +Q +G
Sbjct: 404 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 463

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAF 586
           +RPD  T   ++    ++   E A  +FG+M ++G  PS AVY S++   CR R+   A 
Sbjct: 464 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAE 523

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP--YTIWLI 643
           +   Q +R+    D+    S I  +    +  N  +   EM  +    Q  P  Y   + 
Sbjct: 524 ATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKR--GLQPGPHAYGSLIN 581

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKN 699
           GL +  ++++AL     ++E    + P + +   LI+   ++G + L +D+ +  +K 
Sbjct: 582 GLVKGNKIRKALGYLERMLE--EGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKT 637



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 147/721 (20%), Positives = 282/721 (39%), Gaps = 130/721 (18%)

Query: 93  NVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           +V + +  +  +I G ++ G  +  L+ + +M +   QPD   YN ++    + +    A
Sbjct: 218 HVQLDAYAYTTMIWGLFEHGRVDHGLQMYHEMIDRGIQPDAATYNVMIRWYCKSKWVGAA 277

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV--- 209
           + +Y  M++    P++  +++L+  L K GK   A  + D+M + G+ P+   +  +   
Sbjct: 278 MDIYKVMIRTGVAPDLRCYTILMASLCKDGKLGEAENLFDKMLESGLFPDHVMFISIARF 337

Query: 210 -------------------------------ISGLC-QINRADEAYRLFLKMKDSGCSPD 237
                                          ++G C  ++   EA  L  ++  S   P 
Sbjct: 338 FPKGWVVLFVRKALKAVAKLDCGAKLLELSSLAGGCSNMSLQKEADHLLDEIVTSNVLPV 397

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
            +  N ++   C   R+D +  LL      G  P + +Y+ +I  L    R D+A A   
Sbjct: 398 NIVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALIT 457

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
            M    + PD+    +M+    + G+++ A+ L  +M + GI P    Y+++I   C + 
Sbjct: 458 IMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMR 517

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            L +A +   ++ +    P+   +T LI G        +  ++F++M K G  P    + 
Sbjct: 518 RLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYG 577

Query: 418 ALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           +LI+GL K  ++ KA   L   +E G  P   +                 ++ Q+   G 
Sbjct: 578 SLINGLVKGNKIRKALGYLERMLEEGIAPQTVI--------------YTMLINQFFRKGD 623

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCK---------------------------- 508
           +     +++ + ++   PD+ITY +L+ G C+                            
Sbjct: 624 VRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRMLPQ 683

Query: 509 -VGNINGALK---------------LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            +   NG  K               + ++L+  G+ PD   Y  +INGL R ++ +DA+ 
Sbjct: 684 IIDTRNGKQKDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYS 743

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +   M Q G  P+   Y  LM    R                                  
Sbjct: 744 LLSVMDQTGILPNHVTYTILMNNQIRL--------------------------------- 770

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
            G++ +AIQ    ++     F    Y  ++ GL   G++KEAL+   ++ +   + +  S
Sbjct: 771 -GDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKAS 829

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
             KL+  L     +D+ + +F   L  G+   PR  NY    L+ +KD +   A  +   
Sbjct: 830 YDKLMELLLAENAIDIVLQLFEDMLFQGYT--PRYANYTSLLLVLAKDGRWSEADRIFTM 887

Query: 733 M 733
           M
Sbjct: 888 M 888



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 137/297 (46%), Gaps = 19/297 (6%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           ++I+ L+K N        L+ +    ++  + ++ +LI+ +++ GD    L+    M + 
Sbjct: 578 SLINGLVKGNKIRKALGYLERMLEEGIAPQTVIYTMLINQFFRKGDVRLGLDLVVLMMKT 637

Query: 128 DCQPDVYIYNAVL-----NIAFRKQLFLLALAV---YYEMVKLNCLPNIVTFSLLINGLS 179
           +  PD+  Y A++     NIA R     LA  +    Y + ++  LP I+      NG  
Sbjct: 638 NVAPDLITYGALVTGICRNIARRGMRPSLAKKLKEARYMLFRM--LPQIIDTR---NGKQ 692

Query: 180 KSGK------TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           K  +       +VA  ++ ++ + G++P+   Y  +I+GLC+ N+ D+AY L   M  +G
Sbjct: 693 KDNQICTEEMIQVAQGIIQDLEENGMVPDLHIYNGMINGLCRANKMDDAYSLLSVMDQTG 752

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             P+ V Y  L+N   +L  ++ A+ L  S   DG V    +Y+  I GL  A R  EA 
Sbjct: 753 ILPNHVTYTILMNNQIRLGDINHAIQLFNSLNSDGCVFDKITYNTFIKGLSLAGRMKEAL 812

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           ++   M +    P    Y  ++  L     +   ++L  DM  +G  P    Y +L+
Sbjct: 813 SFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLL 869



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 80/173 (46%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD++IYN ++N   R      A ++   M +   LPN VT+++L+N   + G    AI++
Sbjct: 720 PDLHIYNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQL 779

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            + +   G + +K TY   I GL    R  EA    L M   G  P   +Y+ L+     
Sbjct: 780 FNSLNSDGCVFDKITYNTFIKGLSLAGRMKEALSFLLMMHKRGFVPSKASYDKLMELLLA 839

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
              +D  L L       G+ PR  +Y+ L+  L +  R+ EA   +  M +++
Sbjct: 840 ENAIDIVLQLFEDMLFQGYTPRYANYTSLLLVLAKDGRWSEADRIFTMMLKKR 892



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 35/191 (18%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L + N  D  +  L  +    +      + +L++   ++GD   A++ F  +  
Sbjct: 726 NGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLNS 785

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C  D   YN                                TF   I GLS +G+ + 
Sbjct: 786 DGCVFDKITYN--------------------------------TF---IKGLSLAGRMKE 810

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+  L  M +RG +P+K +Y  ++  L   N  D   +LF  M   G +P +  Y +LL 
Sbjct: 811 ALSFLLMMHKRGFVPSKASYDKLMELLLAENAIDIVLQLFEDMLFQGYTPRYANYTSLLL 870

Query: 247 GFCKLRRVDEA 257
              K  R  EA
Sbjct: 871 VLAKDGRWSEA 881


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 262/541 (48%), Gaps = 34/541 (6%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGN--VSVVSDVFF-VLISGYYKVGDCEKALESFGKM 124
            ++ +LLK          LDE+   N   SV  ++ F  L+       D E  +    K+
Sbjct: 179 GLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGE-VVGLVAKL 237

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
            E    PD +    ++      Q   +A  V + +++L    +  + + L+  L +    
Sbjct: 238 GERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDI 297

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS------PDF 238
           +   ++L EM +R I P+  T+ I+++ LC+  R DEA ++F +++  G S      PD 
Sbjct: 298 KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDV 357

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGF-VPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           V +N L++G CK+ + ++ L+LL   +      P   +Y+CLIDG F+A  +D A+  +R
Sbjct: 358 VLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFR 417

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           +M EE ++P+V+    ++ GL + G+V  A++  ++M+ +G+  +   Y ALI  FC + 
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A     E+      P+   +  LI G+C  G ++DA  + +K++ AG       +N
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYN 537

Query: 418 ALIDGLCKAGELEKANLLFYKM-EIGKNP------TLFLRLSQGGNRVHDKASLQTMVEQ 470
            LI G CK  +LE+   L  +M E G  P      TL   L + G+       ++ M+++
Sbjct: 538 VLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE 597

Query: 471 ---------------YCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNING 514
                          YC+   + +  KI  ++  +  + P+ + YN LI+  C+  +++ 
Sbjct: 598 GLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDR 657

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A+ L +++++K +RP++ TY  ++ G++       AF +  +M +  C P     + L  
Sbjct: 658 AISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTE 717

Query: 575 W 575
           W
Sbjct: 718 W 718



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 191/392 (48%), Gaps = 8/392 (2%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELR----SGNVSVVSDV--FFVLISGYY 109
           KRK   S  +   +++ L K    D   Q  D LR    S  V V  DV  F  LI G  
Sbjct: 309 KRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLC 368

Query: 110 KVGDCEKALESFGKMKEFDC-QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           KVG  E  L    +MK  +  +P+   YN +++  F+   F  A  ++ +M +    PN+
Sbjct: 369 KVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNV 428

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           +T + L++GL K G+   A++  +EM  +G+  N  TYT +IS  C +N  + A + F +
Sbjct: 429 ITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEE 488

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M  SGCSPD V Y +L++G C   R+++A  ++   +  GF      Y+ LI G  + K+
Sbjct: 489 MLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKK 548

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
            +  Y    +M E  ++PD + Y  +I  L + G    A K++  M + G+ P    Y A
Sbjct: 549 LERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGA 608

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +I  +C    +D+   +  E+     + PNT  + ILI  +CRN  VD A  L   M+  
Sbjct: 609 IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
              P+   +NA++ G+     L KA  L  +M
Sbjct: 669 RVRPNTTTYNAILKGVRDKKMLHKAFELMDRM 700



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 206/466 (44%), Gaps = 28/466 (6%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK------LNCLP 166
           D ++  E   +M++   +P V  +  ++N   + +    AL V+  +        +   P
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVISGLCQINRADEAYRL 225
           ++V F+ LI+GL K GK E  + +L+EM    I  PN  TY  +I G  +    D A+ L
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F +M + G  P+ +  N L++G CK  RV  A+      +  G      +Y+ LI     
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCG 475

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               + A   + +M      PD V+Y  +I GL  AG++ DA  ++S ++  G   D  C
Sbjct: 476 VNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSC 535

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN LI GFC    L++   L  E+ +    P+T T+  LI  + + G    A K+  KM 
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMI 595

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM----EIGKNPTLFLRLSQGGNRVHDK 461
           K G  PSV  + A+I   C    +++   +F +M    ++  N  ++             
Sbjct: 596 KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY------------- 642

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                +++  C    + +A  ++  +      P+  TYN+++ G      ++ A +L   
Sbjct: 643 ---NILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDR 699

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +  +  RPD +T   L   L  V  E +  + F +  Q+   P+ +
Sbjct: 700 MVEEACRPDYITMEVLTEWLSAVG-EIEKLKHFVEGYQDSSYPASS 744



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 144/568 (25%), Positives = 245/568 (43%), Gaps = 79/568 (13%)

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK--DGFVPRLGSYS 277
           +++  LF ++  S  SP     + LL    K  R  +AL +L    +   GF     +  
Sbjct: 158 NDSLLLFNQLDPSSKSPQLC--HGLLRVLLKSGRAGDALHVLDEMPQANSGFSV---TGE 212

Query: 278 CLIDGLFRAKRY---DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
            +   L R+ R     E      K+ E  + PD      ++  L    K   A ++L  +
Sbjct: 213 IVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCV 272

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              G   D    NAL+        + +   L  E+ KR   P+  TF IL+  +C+   +
Sbjct: 273 MRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRI 332

Query: 395 DDAQKLFNKMEK------AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
           D+A ++F+++         G  P V +FN LIDGLCK G+ E    L  +M++G      
Sbjct: 333 DEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNI---- 388

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                  NR  +  +   +++ +  AG   +A+++  Q+ E G  P++IT N+L++G CK
Sbjct: 389 -------NRP-NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCK 440

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G ++ A++ F E++ KGL+ ++ TY  LI+    V+    A + F +M  +GC+P   V
Sbjct: 441 HGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVV 500

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEM 626
           Y SL++  C   + + A S+ +  L+      D S  +  I  F +K ++E   + L EM
Sbjct: 501 YYSLISGLCIAGRMNDA-SVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEM 559

Query: 627 D------------------FKLNDFQLAP-----------------YTIWLIGLCQDGQV 651
           +                   K  DF  A                  Y   +   C    V
Sbjct: 560 EETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNV 619

Query: 652 KEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVC 708
            E + IF  +  C     PP+ V    LI  LC+   +D A+ + +  +K   + RP   
Sbjct: 620 DEGMKIFGEM--CSTSKVPPNTVIYNILIDALCRNNDVDRAISL-MEDMKVKRV-RPNTT 675

Query: 709 NY--LLRSLLFSKDNKKVH-AYHLLCRM 733
            Y  +L+ +   +D K +H A+ L+ RM
Sbjct: 676 TYNAILKGV---RDKKMLHKAFELMDRM 700



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 124/263 (47%), Gaps = 1/263 (0%)

Query: 64  ASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGK 123
           A+ +A+IS     N  +   Q  +E+ S   S  + V++ LISG    G    A     K
Sbjct: 464 ATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSK 523

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGK 183
           +K      D   YN +++   +K+       +  EM +    P+ +T++ LI+ L K+G 
Sbjct: 524 LKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGD 583

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYN 242
              A K++++M + G+ P+  TY  +I   C     DE  ++F +M   S   P+ V YN
Sbjct: 584 FATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYN 643

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
            L++  C+   VD A++L+   +     P   +Y+ ++ G+   K   +A+    +M EE
Sbjct: 644 ILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEE 703

Query: 303 KIEPDVVLYGVMIRGLSEAGKVK 325
              PD +   V+   LS  G+++
Sbjct: 704 ACRPDYITMEVLTEWLSAVGEIE 726



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 1/204 (0%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS   K    +  ++ L E+    V   +  +  LIS   K GD   A +   KM +
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTE 185
              +P V  Y A+++    K+     + ++ EM   + +P N V +++LI+ L ++   +
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            AI ++++M  + + PN  TY  ++ G+       +A+ L  +M +  C PD++    L 
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLT 716

Query: 246 NGFCKLRRVDEALALLRSFEKDGF 269
                +  +++    +  ++   +
Sbjct: 717 EWLSAVGEIEKLKHFVEGYQDSSY 740


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 158/669 (23%), Positives = 292/669 (43%), Gaps = 72/669 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F +++  Y + GD  +A E+F +M+     P   IY ++++     +    AL+   +M 
Sbjct: 310 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 369

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+++ G SK+G  E A    DE  +     N   Y  +I   CQ    +
Sbjct: 370 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 429

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M++ G       Y+ +++G+  +    + L + +  ++ GF P + +Y CLI
Sbjct: 430 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 489

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    R M EE ++ ++  Y +MI G  +     +A  +  DM + G+ 
Sbjct: 490 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 549

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I  FC +G +D+A     E+ K    P T TF  +I G  ++G +  + ++
Sbjct: 550 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 609

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNR 457
           F+ M + GC P+V  FN LI+GL +  ++EKA  +  +M    +  N   + ++ QG   
Sbjct: 610 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG--- 666

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                        Y + G   KA++   +L   G   DI TY +L+   CK G +  AL 
Sbjct: 667 -------------YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 713

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           + KE+  + +  +S  Y  LI+G  R     +A  +  QM + G  P    Y S ++ +C
Sbjct: 714 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS-AC 772

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            +                                  G++  A Q + EM+       +  
Sbjct: 773 SK---------------------------------AGDMNRATQTIEEMEALGVKPNIKT 799

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAI-VTPPSCVK--LIHGLCKRGYLDLAMDVFL 694
           YT  + G  +    ++AL+ +    E KA+ + P   V   L+  L  R  +    + ++
Sbjct: 800 YTTLIKGWARASLPEKALSCYE---EMKAMGIKPDKAVYHCLLTSLLSRASI---AEAYI 853

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
           Y+   G +    +C  ++ + L       VH    LC++++ G +L   L    +   P 
Sbjct: 854 YS---GVMT---ICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETL----QKTFPP 903

Query: 755 PWNTREMEN 763
            W++    +
Sbjct: 904 DWSSHHHHH 912



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 198/450 (44%), Gaps = 21/450 (4%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +     ++  ++ GY  V D +K L  F ++KE    P V  Y  ++N+  +  
Sbjct: 437 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 496

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M +     N+ T+S++ING  K      A  + ++M + G+ P+   Y 
Sbjct: 497 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 556

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +IS  C +   D A +   +M+     P    +  +++G+ K   +  +L +     + 
Sbjct: 557 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 616

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G VP + +++ LI+GL   ++ ++A     +M    +  +   Y  +++G +  G    A
Sbjct: 617 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 676

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + ++  G+  D + Y AL+K  C  G +  A ++  E+  R+   N+  + ILI G
Sbjct: 677 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 736

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPT 446
             R G V +A  L  +M+K G  P +  + + I    KAG++ +A     +ME +G  P 
Sbjct: 737 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 796

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T+++ +  A L  KA     ++   G  PD   Y+ L+   
Sbjct: 797 I--------------KTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 842

Query: 507 CKVGNI------NGALKLFKELQLKGLRPD 530
               +I      +G + + KE+   GL  D
Sbjct: 843 LSRASIAEAYIYSGVMTICKEMVEAGLIVD 872



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 159/376 (42%), Gaps = 55/376 (14%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           +IS        D   QT+ E++       +  F  +I GY K GD  ++LE F  M+   
Sbjct: 558 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 617

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C P V+ +N                                    LINGL +  + E A+
Sbjct: 618 CVPTVHTFNG-----------------------------------LINGLVEKRQMEKAV 642

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           ++LDEMT  G+  N+ TYT ++ G   +    +A+  F ++++ G   D   Y ALL   
Sbjct: 643 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 702

Query: 249 CKLRRVDEALALL-----RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
           CK  R+  ALA+      R+  ++ FV     Y+ LIDG  R     EA    ++M +E 
Sbjct: 703 CKSGRMQSALAVTKEMSARNIPRNSFV-----YNILIDGWARRGDVWEAADLIQQMKKEG 757

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           ++PD+  Y   I   S+AG +  A + + +M   G+ P+   Y  LIKG+    L ++A 
Sbjct: 758 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 817

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA------QKLFNKMEKAGCFPSVGMFN 417
           S   E+      P+   +  L+  +     + +A        +  +M +AG    +G   
Sbjct: 818 SCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAV 877

Query: 418 ALIDGLCK----AGEL 429
                LCK     GEL
Sbjct: 878 HWSKCLCKIEASGGEL 893



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I+ L++    +   + LDE+    VS     +  ++ GY  VGD  KA E F +++ 
Sbjct: 626 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 685

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D++ Y A+L    +      ALAV  EM   N   N   +++LI+G ++ G    
Sbjct: 686 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 745

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  ++ +M + G+ P+  TYT  IS   +    + A +   +M+  G  P+   Y  L+ 
Sbjct: 746 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 805

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           G+ +    ++AL+     +  G  P    Y CL+  L       EAY +
Sbjct: 806 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIY 854


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 208/416 (50%), Gaps = 16/416 (3%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADE 221
           +C P++V ++ LI G  K+G  + A+ M   + Q G   PN  ++  ++  LC+++RA +
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  +F +M  +G   D    N L++  C+L  + +A  LL       FV  + +YS L+D
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            L +A R  +A   +  M +    PD V+Y V+I  L + GKV +A++LL DM  +GI+P
Sbjct: 126 ALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 185

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   YN +I      G  ++A S    + +R   P+  T+  L+ G+ +    D+A  LF
Sbjct: 186 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 245

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHD 460
           ++M+   C P +  F  LID L KAG +E A     ++ ++G  P  ++           
Sbjct: 246 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYI----------- 294

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 ++  +C +G + K Y++   + E    PD ITY  L+ GF + G+ + A++L +
Sbjct: 295 ---YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQ 351

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           E+  +G  P   TY  LI  L    + EDA+ +F +M   G  P    Y +L   S
Sbjct: 352 EMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPNLS 407



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 197/407 (48%), Gaps = 16/407 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMK-EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  LI+GY K GD ++AL+ F ++K E  C+P+   ++ ++    +      ALAV+ E
Sbjct: 13  AYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQE 72

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+      ++   + LI+   + G    A ++L  MT    + + FTY+ ++  L +  R
Sbjct: 73  MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGR 132

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
           A +A  +F  M+ +GC PD V YN L++   K  +VDEAL LL    + G +P   +Y+ 
Sbjct: 133 AAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 192

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +ID L    RY++AY+++  M   K  PDVV Y  ++ GL +  +  +A  L  +M+   
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
            +PD   +  LI      G ++ A      + K   +PN++ +  LI G CR+G VD   
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGY 312

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           +LF  M +  CFP    +  L+ G  + G    A  L  +M   G  P L          
Sbjct: 313 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPAL---------- 362

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
               A+   ++     AG +  AY +  ++   G  PD+ TY++L N
Sbjct: 363 ----ATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 405



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 192/399 (48%), Gaps = 23/399 (5%)

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAM 328
            P + +Y+ LI G  +A   D A   +R++ +E   +P+ V +  ++  L +  +  DA+
Sbjct: 8   APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            +  +M   G+  D    N LI   C LG+L QAR L   +     + +  T++ L+  +
Sbjct: 68  AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLF 448
            + G    A ++F+ M+KAGC P   ++N LI  L K G++++A                
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEA---------------- 171

Query: 449 LRLSQGGNR---VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLING 505
           L L +  NR   + D  +   +++   + G   KAY     +    + PD++TYN+L+NG
Sbjct: 172 LELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNG 231

Query: 506 FCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPS 565
             K+   + A  LF E+Q     PD  T+GTLI+ L +  R EDA     ++ + G  P+
Sbjct: 232 LKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPN 291

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGL 623
             +Y +L++  CR  +    + L+ Q + + S   D    +I    F ++G    A++ L
Sbjct: 292 SYIYNALISGFCRSGQVDKGYELF-QDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 350

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
            EM  + +   LA Y + +  L   GQV++A  +F  ++
Sbjct: 351 QEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMI 389



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 193/426 (45%), Gaps = 28/426 (6%)

Query: 334 MRER-GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRN 391
           MRE     PD   YN LI G+C  G  D+A  +   + +  S  PN  +F  L+  +C+ 
Sbjct: 1   MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 60

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
               DA  +F +M  AG    V + N LI   C+ G L +A  L + M            
Sbjct: 61  SRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHM------------ 108

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                 V D  +   +++    AG   KA ++   + ++G +PD + YN LI+   K G 
Sbjct: 109 -TAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGK 167

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           ++ AL+L +++  KG+ PD  TY  +I+ L    R E A+  FG M +   +P    Y +
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 227

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQG---LLEMD 627
           L+    + R+   A  L+ +   +    D  +  ++ + L K G +E+A++    L++M 
Sbjct: 228 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 287

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
              N +    Y   + G C+ GQV +   +F  ++EC       +   L+ G  +RG+  
Sbjct: 288 HVPNSY---IYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 344

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
           +AM++    ++ G        N L+RSL  S   +   AY L   M + G++ D     +
Sbjct: 345 MAMELLQEMVREGHTPALATYNVLIRSL--SMAGQVEDAYTLFKEMIAKGFNPDM----Q 398

Query: 748 TKSLLP 753
           T S LP
Sbjct: 399 TYSALP 404



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 124/248 (50%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +IS L K    D   + L+++    +      + ++I      G  EKA   FG MK 
Sbjct: 156 NVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKR 215

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PDV  YN +LN   + +    A  ++ EM    C+P++ TF  LI+ L+K+G+ E 
Sbjct: 216 RKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMED 275

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A++    + + G +PN + Y  +ISG C+  + D+ Y LF  M +  C PD + Y  L+ 
Sbjct: 276 ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVL 335

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           GF +      A+ LL+   ++G  P L +Y+ LI  L  A + ++AY  +++M  +   P
Sbjct: 336 GFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNP 395

Query: 307 DVVLYGVM 314
           D+  Y  +
Sbjct: 396 DMQTYSAL 403



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 103/213 (48%)

Query: 34  VTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGN 93
           V  V+      +  + FF    +RK      + + +++ L K    D      DE+++  
Sbjct: 193 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
                  F  LI    K G  E ALE   ++ +    P+ YIYNA+++   R        
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGY 312

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            ++ +M++ +C P+ +T+++L+ G S+ G T +A+++L EM + G  P   TY ++I  L
Sbjct: 313 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 372

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
               + ++AY LF +M   G +PD   Y+AL N
Sbjct: 373 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 405


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 279/630 (44%), Gaps = 111/630 (17%)

Query: 22  LEPLLPFLSKTTVTSVIMKTKN-PQVGFRFFIWAAKRKRL-----------------RSF 63
           LE + P L+ + V  V+ + +N PQ+   F+ W   R                    R+F
Sbjct: 49  LEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNF 108

Query: 64  ASNSAVISMLLKPNG-----------------------FDLYWQTLDELRS--GNVSVVS 98
               +++  L+  NG                       F    +T  +LRS  G   V+ 
Sbjct: 109 NDALSIMESLILXNGKSPLEVLGGLMNSYEICNSNPAVFXARVRTCTQLRSVEGAYDVIR 168

Query: 99  DV----FFVLISGYYKV-------GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
            +    F+V I  +          G+ +K    + +M       +V  +N ++     + 
Sbjct: 169 KLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNEC 228

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
             L A+ V Y M+K+   PN+VTF+++I+  +K G+ ++A+K+                T
Sbjct: 229 KLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRN-------------T 275

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            VISG                      SP+ VAYN ++NGFCK+RR++ A  +L    K 
Sbjct: 276 EVISG-------------------GSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKL 316

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G      +Y+ LIDG  R    D A+    +M E ++ PD  +Y  +I  L   G++++A
Sbjct: 317 GIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEA 376

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             LLSDM  R I+PD + Y+ L KG C  G L++A  +   I +R  + +  T+ ILI  
Sbjct: 377 SFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINY 436

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE--------------KAN 433
           M ++  +  A++L + M   G  P +  +   +DG CK G++E              K+N
Sbjct: 437 MFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSN 496

Query: 434 LLFY---------KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
           L+ Y         +  I     L  +L Q G    D  +  T++  +C  G I KA+ + 
Sbjct: 497 LVVYNSILDGLCKQGSIYAAKLLVDKLQQNG--FLDPVTYNTLLHGFCVNGEIEKAFALF 554

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           +++   G+L +I++YN +I+  CK+G I  A++L + +  +G+ PD +TY TLI     +
Sbjct: 555 LEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEI 614

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
              +D   +   M   G  P    Y+S ++
Sbjct: 615 CGSKDVIELHDYMVLKGAVPDRKTYRSFVS 644



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 62/526 (11%)

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           Q+   + AY +  K++  G      A+N  LN   KL   D+   + +     G+   + 
Sbjct: 156 QLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVN 215

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD- 333
           +++ +I  L    +  EA      M + +I P+VV + ++I   ++ G++  A+KL  + 
Sbjct: 216 TFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNT 275

Query: 334 --MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             +    + P+   YN +I GFC +  L+ A+++  E+ K     N  T+  LI G  R 
Sbjct: 276 EVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARK 335

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +D A +L ++M +    P   ++N+LI  L   GELE+A+ L               L
Sbjct: 336 GSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFL---------------L 380

Query: 452 SQGGNR--VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           S   NR  + D+ +   + +  C +G ++KA ++   + E   + D  TYN LIN   + 
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQS 440

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
            NI GA +L   + + G++PD VTYGT ++G  +  + E A +I+ +  +     +  VY
Sbjct: 441 RNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVY 500

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
            S++   C++     A  L                  +++  Q G ++            
Sbjct: 501 NSILDGLCKQGSIYAAKLL------------------VDKLQQNGFLDP----------- 531

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                   Y   L G C +G++++A  +F  ++   ++V   S   +IH LCK G +  A
Sbjct: 532 ------VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQA 585

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLLF-----SKDNKKVHAYHLL 730
           M++       G I  P +  Y      F     SKD  ++H Y +L
Sbjct: 586 MELMRAMSSQGII--PDLITYTTLITNFVEICGSKDVIELHDYMVL 629



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 54/112 (48%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ G+   G+ EKA   F +M       ++  YN +++   +  L   A+ +   M    
Sbjct: 537 LLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQG 596

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            +P+++T++ LI    +   ++  I++ D M  +G +P++ TY   +S   Q
Sbjct: 597 IIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTYRSFVSPCLQ 648


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 183/723 (25%), Positives = 317/723 (43%), Gaps = 83/723 (11%)

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           W  L E  + N  +      +L++     G+  KA +   KMK       V  YN +L+ 
Sbjct: 208 WLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSV-TYNTILHW 266

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             +K  F  AL V  +M + +   +I T++++I+ L +  ++  A  +L  M +  ++P+
Sbjct: 267 YVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPD 326

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA--- 259
           + TY  +I+G     + + A+ +F  M      P    Y  +++G+C+ RR+D+AL+   
Sbjct: 327 ECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLS 386

Query: 260 -----------------LLRSFEKDGFVPRLGSYS------------------------- 277
                            +L+S  +DG  P + +YS                         
Sbjct: 387 EMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISF 446

Query: 278 ------CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
                 C+ID         EA+  Y  M      P+V  Y  ++RGL + G +  A + +
Sbjct: 447 DSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 506

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             + +     D   +NAL+ G C  G LD+A  L  ++ K + LP+ HT+TIL+ G CR 
Sbjct: 507 FCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRK 566

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G +  A  +   M   G  P    +  L++GL   G+++ A+ +F   EI     L+   
Sbjct: 567 GKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVF--QEIICKEGLY--- 621

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                   D  +  +++  Y   G I+   +++  + +S   P+  +YN L++G+ K G 
Sbjct: 622 -------ADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQ 674

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
            + +L L+K +  KG+RPD+VTY  LI GL      + A +   +M   G  P   V+  
Sbjct: 675 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDI 734

Query: 572 LMTWSCRRRKFSLAFSLW--LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
           L+T    + K   A  L+  +++LR +S         I   ++K  ++ + + L EM   
Sbjct: 735 LITAFSEKSKMHNALQLFNCMKWLR-MSPSSKTYSAMINGLIRKNYLDQSHEVLREM--- 790

Query: 630 LNDFQLAPYTIWLIGL----CQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCK 682
                L P     I L    C+ G++  A   F +  E KA+   P+ V    +I GLCK
Sbjct: 791 -LQVGLQPNHTHYIALVNAKCRVGKIDRA---FRLKEEMKALGIVPADVAESSIIRGLCK 846

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            G L+ A+ VF   +++G +  P V  +        K++K   A HL   M+S    +D 
Sbjct: 847 CGKLEEAVIVFSTMMRSGMV--PTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDV 904

Query: 743 CLY 745
             Y
Sbjct: 905 VSY 907



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 228/468 (48%), Gaps = 18/468 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ G  K G  ++AL+   KM + +C PD++ Y  +L+   RK   L AL +   M
Sbjct: 520 TFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMM 579

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT-QRGILPNKFTYTIVISGLCQINR 218
           +    +P+ V ++ L+NGL   G+ + A  +  E+  + G+  +   Y  +++G  +   
Sbjct: 580 LDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGN 639

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            +   R+   M  S   P+  +YN L++G+ K  +  ++L L +   + G  P   +Y  
Sbjct: 640 INTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRL 699

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           LI GL      D A  +  KM  E I PD +++ ++I   SE  K+ +A++L + M+   
Sbjct: 700 LILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLR 759

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P +  Y+A+I G      LDQ+  +  E+ +    PN   +  L+   CR G +D A 
Sbjct: 760 MSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAF 819

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR 457
           +L  +M+  G  P+    +++I GLCK G+LE+A ++F  M   G  PT+          
Sbjct: 820 RLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTV---------- 869

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLINGFCKVGNINGAL 516
               A+  T++   C    I  A   L +L ES  L  D+++YN LI G CK   I+ AL
Sbjct: 870 ----ATFTTLMHCLCKESKIADALH-LKRLMESCRLKVDVVSYNVLITGLCKDKRISDAL 924

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            L++E++ KGL P+  TY TL   +      ++   +   + + G  P
Sbjct: 925 DLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 214/424 (50%), Gaps = 18/424 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL +  +MVK NCLP+I T+++L++G  + GK   A+ ML  M  +G++P+   YT +++
Sbjct: 537 ALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLN 596

Query: 212 GLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           GL    +   A  +F ++    G   D +AYN+L+NG+ K   ++    ++    +    
Sbjct: 597 GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVY 656

Query: 271 PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           P   SY+ L+ G  +  ++ ++   Y+ M  + I PD V Y ++I GLSE G +  A+K 
Sbjct: 657 PNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 716

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL-QVEIWKRDSLPNTHTFTILICGMC 389
           L  M   GI PD   ++ LI  F +   +  A  L     W R S P++ T++ +I G+ 
Sbjct: 717 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMS-PSSKTYSAMINGLI 775

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLF 448
           R   +D + ++  +M + G  P+   + AL++  C+ G++++A  L  +M+ +G  P   
Sbjct: 776 RKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPA-- 833

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                         +  +++   C  G + +A  +   +  SG +P + T+ +L++  CK
Sbjct: 834 ------------DVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCK 881

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
              I  AL L + ++   L+ D V+Y  LI GL +  R  DA  ++ +M   G  P+   
Sbjct: 882 ESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTT 941

Query: 569 YKSL 572
           Y +L
Sbjct: 942 YITL 945



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 159/711 (22%), Positives = 307/711 (43%), Gaps = 72/711 (10%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           K  RL +  + + ++   +K   F      L+++   ++      + ++I    ++    
Sbjct: 250 KTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSA 309

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A     +M++ D  PD   YN ++N  F +     A  V+  M++   +P++ T++ +I
Sbjct: 310 RAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMI 369

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT----------------IVISGLCQINRA 219
           +G  ++ + + A+ +L EM   G++P++ +                  +  S L      
Sbjct: 370 DGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMI 429

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            EA      M     S D V++N +++ +C    + EA  +  +  + G  P + +Y  L
Sbjct: 430 TEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNL 489

Query: 280 IDGL------FRAKRY-----------------------------DEAYAWYRKMFEEKI 304
           + GL       +AK++                             DEA     KM +   
Sbjct: 490 LRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNC 549

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            PD+  Y +++ G    GK+  A+ +L  M ++G+VPDT  Y  L+ G  + G +  A  
Sbjct: 550 LPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASY 609

Query: 365 LQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           +  EI  ++ L  +   +  L+ G  + G ++  +++ + M ++  +P+   +N L+ G 
Sbjct: 610 VFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGY 669

Query: 424 CKAGELEKANLLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            K G+  K+  L+ Y +  G  P              D  + + ++      GLI  A K
Sbjct: 670 VKGGQFSKSLYLYKYMVRKGIRP--------------DNVTYRLLILGLSECGLIDIAVK 715

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            L ++   G  PD + ++ LI  F +   ++ AL+LF  ++   + P S TY  +INGL 
Sbjct: 716 FLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLI 775

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL--WLQYLRDISGRD 600
           R +  + +  +  +M Q G  P+   Y +L+   CR  K   AF L   ++ L  +    
Sbjct: 776 RKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADV 835

Query: 601 DESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
            ES   I    + G++E A+     M        +A +T  +  LC++ ++ +AL++  +
Sbjct: 836 AES-SIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRL 894

Query: 661 LVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYL 711
           +  C+  V   S   LI GLCK   +  A+D++      G  L P V  Y+
Sbjct: 895 MESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKG--LWPNVTTYI 943



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 173/366 (47%), Gaps = 12/366 (3%)

Query: 96  VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYI----YNAVLNIAFRKQLF 149
           VV D   +  L++G    G  + A   F   +E  C+  +Y     YN+++N   +    
Sbjct: 584 VVPDTVAYTCLLNGLINEGQVKAASYVF---QEIICKEGLYADCIAYNSLMNGYLKGGNI 640

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
                +  +M +    PN  ++++L++G  K G+   ++ +   M ++GI P+  TY ++
Sbjct: 641 NTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLL 700

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I GL +    D A +   KM   G  PD + ++ L+  F +  ++  AL L    +    
Sbjct: 701 ILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRM 760

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P   +YS +I+GL R    D+++   R+M +  ++P+   Y  ++      GK+  A +
Sbjct: 761 SPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFR 820

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L  +M+  GIVP     +++I+G C  G L++A  +   + +   +P   TFT L+  +C
Sbjct: 821 LKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLC 880

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPT 446
           +   + DA  L   ME       V  +N LI GLCK   +  A  L+ +M+   +  N T
Sbjct: 881 KESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVT 940

Query: 447 LFLRLS 452
            ++ L+
Sbjct: 941 TYITLT 946



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 160/445 (35%), Gaps = 87/445 (19%)

Query: 325 KDAMKLLSDMRER-GIVPDTYCYNALIKGFCDLGLLDQARSLQ----------------- 366
           K A+K+LS + ER G+   TY Y   +       +  QA S+                  
Sbjct: 82  KLALKILSSIVERSGLDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVMGFSCTAIFTSL 141

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
           + I  R    N   F +L+    +   V DA      M+  G   S    N ++  L + 
Sbjct: 142 LRIISRFDSTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQ 201

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           GE              K   LFLR S   N   D  +   ++   CT G   KA  +L +
Sbjct: 202 GE-------------SKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQK 248

Query: 487 LA---------------------------------ESGNLP-DIITYNSLINGFCKVGNI 512
           +                                  E  ++P DI TYN +I+  C++   
Sbjct: 249 MKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRS 308

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             A  L K ++   L PD  TY TLING     +   A  +F  M +    PS A Y ++
Sbjct: 309 ARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTM 368

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   CR R+   A S+  +    I+G            +   E+  A Q L  M   L D
Sbjct: 369 IDGYCRNRRIDKALSVLSEM--QITG------------VMPSEISKAKQILKSM---LED 411

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
             + P  +    L  +G + EA +    +   K      S   +I   C RG +  A  V
Sbjct: 412 -GIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTV 470

Query: 693 FLYTLKNGFILRPRVCNY--LLRSL 715
           +   ++ G    P VC Y  LLR L
Sbjct: 471 YDAMVRYGH--SPNVCTYQNLLRGL 493


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 279/605 (46%), Gaps = 29/605 (4%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKPN 77
           E  +  LL  L  + V +V+    + +V  +FF WA ++ R R       +++ +L K  
Sbjct: 162 EGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTK 221

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  ++   +    + F  ++  Y + G    AL+    M+    +P++ I N
Sbjct: 222 LCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICN 281

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             +++  R      AL     M  +  +PN+VT++ +I G     + E AI++L++M  +
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDE 256
           G LP+K +Y  ++  LC+  R  E   L  KM K+ G  PD V YN L++   K    DE
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401

Query: 257 ALALLRSFEKDGF-VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVM 314
           AL  L+  ++ GF + +LG YS ++  L +  R  EA     +M  +    PDVV Y  +
Sbjct: 402 ALWFLKDAQEKGFRIDKLG-YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460

Query: 315 IRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---SLQVEIWK 371
           + G    G+V  A KLL  M   G  P+T  Y AL+ G C  G   +AR   ++  E W 
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520

Query: 372 RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
               PN+ T+++++ G+ R G + +A  +  +M   G FP     N L+  LC+ G   +
Sbjct: 521 S---PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577

Query: 432 ANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
           A      ME   N    + +           +  T++  +C    +  A  +L  +    
Sbjct: 578 ARKF---MEECLNKGCAINV----------VNFTTVIHGFCQNDELDAALSVLDDMYLIN 624

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              D+ TY +L++   K G I  A +L K++  KG+ P  VTY T+I+   ++ + +D  
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 684

Query: 552 RIFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EE 609
            I  +M  +  C     +Y  ++   C   K   A +L  + LR  S  D ++  ++ E 
Sbjct: 685 AILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEG 741

Query: 610 FLQKG 614
           +L+KG
Sbjct: 742 YLKKG 746



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 230/522 (44%), Gaps = 60/522 (11%)

Query: 211 SGLCQINRADEAYRLFLKM-----KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           S +C + R+ +  R+ LK      +      D + Y ++L    K +    +  +L   +
Sbjct: 175 SQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMK 234

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G      ++S ++    RA +  +A      M    +EP++++    I     A +++
Sbjct: 235 RRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE 294

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++ L  M+  GIVP+   YN +I+G+CDL  +++A  L  ++  +  LP+  ++  ++
Sbjct: 295 KALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354

Query: 386 CGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
             +C+   + + + L  KM K  G  P    +N LI  L K    ++A            
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA------------ 402

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLI 503
              FL+ +Q      DK     +V   C  G + +A  ++ ++   G+ P D++TY +++
Sbjct: 403 -LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC++G ++ A KL + +   G +P++V+Y  L+NG+ R  +  +A  +     ++  +
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521

Query: 564 PSPAVYKSLMTWSCRRRKFSLA------------------FSLWLQYL-RDISGRDDESM 604
           P+   Y  +M    R  K S A                   +L LQ L RD  GR  E+ 
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD--GRTHEAR 579

Query: 605 KSIEEFLQKG-------------------EVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
           K +EE L KG                   E++ A+  L +M        +  YT  +  L
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            + G++ EA  +   ++      TP +   +IH  C+ G +D
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 219/503 (43%), Gaps = 56/503 (11%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKM 124
           +  I + ++ N  +   + L+ ++   V +V +V  +  +I GY  +   E+A+E    M
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQV--VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLIN------- 176
               C PD   Y  ++    +++  +    +  +M K + L P+ VT++ LI+       
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398

Query: 177 ----------------------------GLSKSGKTEVAIKMLDEMTQRGILP-NKFTYT 207
                                        L K G+   A  +++EM  +G  P +  TYT
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            V++G C++   D+A +L   M   G  P+ V+Y ALLNG C+  +  EA  ++   E+ 
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            + P   +YS ++ GL R  +  EA    R+M  +   P  V   ++++ L   G+  +A
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            K + +   +G   +   +  +I GFC    LD A S+  +++  +   +  T+T L+  
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 638

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
           + + G + +A +L  KM   G  P+   +  +I   C+ G+++    +  KM        
Sbjct: 639 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM-------- 690

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                   +R   +     ++E+ C  G + +A  +L ++  + +  D  T  +L+ G+ 
Sbjct: 691 -------ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYL 743

Query: 508 KVGNINGALKLFKELQLKGLRPD 530
           K G    A K+   +  + L PD
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIPD 766



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 18/378 (4%)

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   Y ++++      L   +R + V + +R        F+ ++    R G + DA K+ 
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD 460
             M++AG  P++ + N  ID   +A  LEKA     +M++ G  P +             
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV------------- 312

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M+  YC    + +A ++L  +   G LPD ++Y +++   CK   I     L K
Sbjct: 313 -VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371

Query: 521 EL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++ +  GL PD VTY TLI+ L + D  ++A        + G       Y +++   C+ 
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + S A  L  + L       D    +  +  F + GEV+ A + L  M    +      
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           YT  L G+C+ G+  EA  + ++  E        +   ++HGL + G L  A DV    +
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551

Query: 698 KNGFILRPRVCNYLLRSL 715
             GF   P   N LL+SL
Sbjct: 552 LKGFFPGPVEINLLLQSL 569



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 136/339 (40%), Gaps = 37/339 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G  + G   +A E     +E    P+   Y+ +++   R+     A  V  EMV
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P  V  +LL+  L + G+T  A K ++E   +G   N   +T VI G CQ +  D
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +   M       D   Y  L++   K  R+ EA  L+                   
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM------------------- 652

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                           +KM  + I+P  V Y  +I    + GKV D + +L  M  R   
Sbjct: 653 ----------------KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 696

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
                YN +I+  C LG L++A +L  ++ +  S  +  T   L+ G  + G+   A K+
Sbjct: 697 --RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 754

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
             +M      P V M   L   L   G++++A+ L  ++
Sbjct: 755 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRL 793


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 175/719 (24%), Positives = 312/719 (43%), Gaps = 50/719 (6%)

Query: 41  TKNPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSV--- 96
           T N +    FF +A+K  + R +  S   +I +LL  N       TL  L  GN +    
Sbjct: 88  TVNLKTTLDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLK 147

Query: 97  -VSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAV 155
                   + S + ++G+      S G++       D+ IY  +L   F+   F  A   
Sbjct: 148 KTDARLSEIASAFLELGE-----RSHGEL-------DLLIY--ILCSQFQHLGFHWAFDT 193

Query: 156 YYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
           +         P++ + + L++ L KS +   + ++ D M + G+L + +TY   I+  C+
Sbjct: 194 FMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCK 253

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
             + DEA  LFLKM + G  P+ V YN L++G CK  R++EAL       ++   P L +
Sbjct: 254 GGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVT 313

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y  L++GL + +++DEA +   +M+ +   P+  ++  +I G S  G + DA+++  DM 
Sbjct: 314 YGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMT 373

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
            +G+ P+   +N L++GFC    ++QA  +   +       N    + ++  +C++   D
Sbjct: 374 LKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFD 433

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG-ELEKANLLFYKMEIGKNPTLFLRLSQG 454
            A K+   +       +  +   L+ GLCK G  LE  +L F             RL+  
Sbjct: 434 SALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWF-------------RLADK 480

Query: 455 GNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNING 514
                +  +   ++   C  G + + + +  ++ E G + D I+YN+LI G CK G I  
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 540

Query: 515 ALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           A KL +++  +G +PD+ TY  L+ GL    + +D  R+  +   +G  P+   Y  ++ 
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600

Query: 575 WSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDF- 633
             C   +   A SL+ + + +      E    +   L      ++  G     FKL D  
Sbjct: 601 GYCNADRIDNAVSLFNKLVYN----KVELSYVVYNILIAA---HSKAGNFTEAFKLRDAM 653

Query: 634 -------QLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
                   +  Y+  + G+C +  V+EA  IF  +     +        LI G CK G +
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713

Query: 687 DLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           D    +      N   ++P    Y +    + K      A  LL  M + G   D   Y
Sbjct: 714 DQIESILQEMTSN--CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTY 770



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 266/594 (44%), Gaps = 58/594 (9%)

Query: 47  GFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLIS 106
            F  F+    +    S  S + ++S L+K N     ++  D +  G V +    +   I+
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
            Y K G  ++A+  F KM E    P+V  YN +++   +      AL     MV+    P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++VT+ +L+NGL K  K + A  +L EM  +G  PN+F +  +I G  +    D+A R+ 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
             M   G  P+ V +N LL GFC+  ++++A  +L     +       + S ++  L ++
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 287 KRYDEAYA------------------------------------WYRKMFEEKIEPDVVL 310
            ++D A                                      W+R   ++ +  +   
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
              ++ GL E G +++   +  +M ERG+V D   YN LI G C  G +++A  L+ ++ 
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM 549

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
           K+   P+T+T+  L+ G+   G +DD  ++ ++ +  G  P++  +  +++G C A  ++
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609

Query: 431 KANLLFYKMEIGKNP-------TLFLRLSQGGN--------------RVHDKA-SLQTMV 468
            A  LF K+   K          L    S+ GN               +H    +  +++
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              C   L+ +A  I  ++   G +P++  Y +LI G+CK+G ++    + +E+    ++
Sbjct: 670 HGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQ 729

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           P+ +TY  +I+G  ++   ++A ++  +M  NG +P    Y  L    C+  + 
Sbjct: 730 PNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENEL 783



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 242/511 (47%), Gaps = 16/511 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           S  +   +++ L+K   FD     L E+ S   S    VF  LI GY + G+ + AL   
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
             M     +P+   +N +L    R      A  V   ++      N    S +++ L KS
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS-GCSPDFVA 240
            K + A+K++  +  R I  N    T+++ GLC+  +  EA  L+ ++ D  G + +   
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
            NALL G C+   ++E   + +   + G V    SY+ LI G  ++ + +EA+    KM 
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM 549

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           ++  +PD   Y  +++GL++ GK+ D  ++L + ++ G+VP+ Y Y  +++G+C+   +D
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
            A SL  ++       +   + ILI    + G   +A KL + M  +   P++  ++++I
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669

Query: 421 DGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            G+C    +E+A  +F +M   G  P +F                  ++  YC  G + +
Sbjct: 670 HGMCCNDLVEEAKGIFEEMRNEGLMPNVF--------------CYTALIGGYCKLGQMDQ 715

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
              IL ++  +   P+ ITY  +I+G+CK+GN   A KL  E+   G+ PD+VTY  L  
Sbjct: 716 IESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQK 775

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
           G  + +  E+  +    +P    T +  V K
Sbjct: 776 GYCKENELEETLQGDTAVPLEEITYTTLVDK 806



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 11/346 (3%)

Query: 60  LRSFASNSAVISMLL--------KPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
           LR+   N +++++L+             DL+++  D+      +  S+    L+ G  + 
Sbjct: 444 LRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNA---LLYGLCER 500

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G+ E+      +M E     D   YN ++    +      A  +  +M+K    P+  T+
Sbjct: 501 GNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTY 560

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           + L+ GL+  GK +   ++L E    G++PN +TY +++ G C  +R D A  LF K+  
Sbjct: 561 NFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 620

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
           +     +V YN L+    K     EA  L  +       P + +YS +I G+      +E
Sbjct: 621 NKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEE 680

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   + +M  E + P+V  Y  +I G  + G++     +L +M    I P+   Y  +I 
Sbjct: 681 AKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMID 740

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           G+C +G   +A  L  E+      P+T T+T+L  G C+   +++ 
Sbjct: 741 GYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 217/424 (51%), Gaps = 19/424 (4%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A A++ +M +L       TF++++  L  +GK   A+++L +M +    PN  TY  VI+
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 212 GLCQINRADEAYRLFLKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           G C   R   A  +  +M++  G +P+   Y  +++G+CK+ RVDEA+ +       G V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 271 -PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P    Y+ LI G     + D A  +  +M E  +   V  Y +++  L   G+  +A +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           L+ +M  +G+ PD + YN LI G C  G + +A  +   + +R       T+T LI  + 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFL 449
           + G V +  KLF++  + G  P + ++NALI+    +G +++A  +  +ME  +      
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR------ 387

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  T++   C  G + +A K++ ++ E G  PD++TYN+LI+G+   
Sbjct: 388 -------IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 440

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++  AL++  E+  KG  P  +TY  LI GL +  + +DA  +  +M +NG TP  + Y
Sbjct: 441 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 500

Query: 570 KSLM 573
            SL+
Sbjct: 501 ISLI 504



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 240/516 (46%), Gaps = 27/516 (5%)

Query: 108 YYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           +  V   +KAL     +   D  P   + N +L  +   +    +L +Y  M  L+   +
Sbjct: 24  FKSVLSADKALSPLAVLPHLDGAPS-SLPNLLLTASAAVRPHATSLRLYSRMKSLSLPIS 82

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
             +   L++ L  +     A  +  +M +  +     T+ I++  LC   +   A  L  
Sbjct: 83  TASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLR 138

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRA 286
           +M      P+ V YN ++ GFC   RV  AL ++R   E+ G  P   +Y  +I G  + 
Sbjct: 139 QMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 287 KRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
            R DEA   + +M  + +++P+ V+Y  +I G  + GK+  A+     M ERG+      
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           YN L+      G   +A  L  E+  +   P+  T+ ILI G C+ G V  A ++F  M 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASL 464
           + G   +V  + ALI  L K G++++ + LF + +  G  P L L               
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL--------------Y 360

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  + T+G I +A++I+ ++ +    PD +TYN+L+ G C +G ++ A KL  E+  
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTE 420

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           +G++PD VTY TLI+G       +DA RI  +M   G  P+   Y +L+   C+  +   
Sbjct: 421 RGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDD 480

Query: 585 AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAI 620
           A ++  + + +    DD +  S+ E L   E E AI
Sbjct: 481 AENMVKEMVENGITPDDSTYISLIEGLTT-EDERAI 515



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 183/360 (50%), Gaps = 5/360 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  +I+G+   G  + AL+   +M+E     P+ Y Y  V++   +      A+ V+ E
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206

Query: 159 MV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           M+ K    P  V ++ LI G    GK + A+   D M +RG+     TY +++  L    
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
           R  EAY L  +M   G +PD   YN L+NG CK   V +AL +  +  + G    + +Y+
Sbjct: 267 RGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYT 326

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            LI  L +  +  E    + +     I PD+VLY  +I   S +G +  A +++ +M ++
Sbjct: 327 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
            I PD   YN L++G C LG +D+AR L  E+ +R   P+  T+  LI G    G V DA
Sbjct: 387 RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDA 446

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNP--TLFLRLSQG 454
            ++ N+M   G  P++  +NALI GLCK G+ + A N++   +E G  P  + ++ L +G
Sbjct: 447 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 177/345 (51%), Gaps = 2/345 (0%)

Query: 86  LDELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIA 143
           + E+R  G ++     +  +ISG+ KVG  ++A++ F +M  + + +P+  +YNA++   
Sbjct: 168 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 227

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +     AL     MV+      + T++LL++ L   G+   A ++++EM  +G+ P+ 
Sbjct: 228 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 287

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           FTY I+I+G C+     +A  +F  M   G     V Y AL+    K  +V E   L   
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDE 347

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G  P L  Y+ LI+    +   D A+    +M +++I PD V Y  ++RGL   G+
Sbjct: 348 AVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 407

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           V +A KL+ +M ERGI PD   YN LI G+   G +  A  ++ E+  +   P   T+  
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           LI G+C+NG  DDA+ +  +M + G  P    + +LI+GL    E
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 20/413 (4%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A+A +  MF  ++      + +M+R L  AGK   A++LL  M      P+   YN +I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 352 GFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGC 409
           GFC  G +  A  +  E+ +R  + PN +T+  +I G C+ G VD+A K+F++M  K   
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P   M+NALI G C  G+L+ A LL+    + +   + +            A+   +V 
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTA-LLYRDRMVERGVAMTV------------ATYNLLVH 260

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                G   +AY+++ ++   G  PD+ TYN LING CK GN+  AL++F+ +  +G+R 
Sbjct: 261 ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRA 320

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             VTY  LI  L +  + ++  ++F +  + G  P   +Y +L+           AF + 
Sbjct: 321 TVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIM 380

Query: 590 LQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQD 648
            +  +     DD +  ++   L   G V+ A + + EM  +     L  Y   + G    
Sbjct: 381 GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMK 440

Query: 649 GQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           G VK+AL I + ++      T  +   LI GLCK G  D A ++    ++NG 
Sbjct: 441 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 493



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 155/322 (48%), Gaps = 1/322 (0%)

Query: 69  VISMLLKPNGFDLYWQTLDE-LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           VIS   K    D   +  DE L  G V   + ++  LI GY   G  + AL    +M E 
Sbjct: 187 VISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVER 246

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
                V  YN +++  F       A  +  EM      P++ T+++LING  K G  + A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +++ + M++RG+     TYT +I  L +  +  E  +LF +    G  PD V YNAL+N 
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
                 +D A  ++   EK    P   +Y+ L+ GL    R DEA     +M E  I+PD
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  +I G S  G VKDA+++ ++M  +G  P    YNALI+G C  G  D A ++  
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVK 486

Query: 368 EIWKRDSLPNTHTFTILICGMC 389
           E+ +    P+  T+  LI G+ 
Sbjct: 487 EMVENGITPDDSTYISLIEGLT 508



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 51/272 (18%)

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   M+   C+AG   +A ++L Q+      P+ +TYN++I GFC  G +  AL + +E+
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171

Query: 523 QLKG-LRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKSLMTWSCRRR 580
           + +G + P+  TYGT+I+G  +V R ++A ++F +M   G   P   +Y +L+   C + 
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231

Query: 581 KFSLA------------------FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQG 622
           K   A                  ++L +  L  + GR  E+ + +EE   KG        
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALF-MDGRGTEAYELVEEMGGKG-------- 282

Query: 623 LLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIH 678
                       LAP    Y I + G C++G VK+AL IF  +       T  +   LI+
Sbjct: 283 ------------LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 679 GLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            L K+G +     +F   ++ G  +RP +  Y
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRG--IRPDLVLY 360



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 1/195 (0%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T +   + K    Q   + F  A +R         +A+I+        D  ++ + E+  
Sbjct: 326 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 385

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             ++     +  L+ G   +G  ++A +   +M E   QPD+  YN +++    K     
Sbjct: 386 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 445

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL +  EM+     P ++T++ LI GL K+G+ + A  M+ EM + GI P+  TY  +I 
Sbjct: 446 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505

Query: 212 GL-CQINRADEAYRL 225
           GL  +  RA +  RL
Sbjct: 506 GLTTEDERAIDDERL 520


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 157/722 (21%), Positives = 306/722 (42%), Gaps = 90/722 (12%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKPN 77
           E  L  LL  L  + V +V+    + +V   FF WA ++ R          ++ +L K  
Sbjct: 151 EGRLRHLLRSLKPSLVCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTK 210

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  +    + +  + F  ++  Y + G    AL     M++   +P++ I N
Sbjct: 211 LCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICN 270

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             + +                                   L K  K E A++ L+ M   
Sbjct: 271 TTIYV-----------------------------------LVKGCKLEKALRFLERMQVT 295

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           GI P+  TY  +I G C +NR ++A  L   +   GC PD V+Y  ++   CK +++++ 
Sbjct: 296 GIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQV 355

Query: 258 LALLRSFEKDG-FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
             L+    +D   +P   +Y+ LI  L +    D+A A+ ++  ++    D V Y  ++ 
Sbjct: 356 KCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVH 415

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
              + G++ +A  L+ DM  R   PD   Y A++ GFC LG +D+A+ +  +++K    P
Sbjct: 416 SFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKP 475

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           NT ++T L+ G+C +G   +A+++ N  E+    P+   +  ++ G  + G+L +A  L 
Sbjct: 476 NTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLT 535

Query: 437 YKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M E G  PT                 +  +++  C    + +A K L +    G   +
Sbjct: 536 REMVEKGFFPT--------------PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAIN 581

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++ + ++I+GFC++G++  AL + +++ L    PD+VTY  L + L +  R ++A  +  
Sbjct: 582 VVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIV 641

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
           +M   G  P+P  ++S++   C+          W        GR D+ +  ++  +++  
Sbjct: 642 KMLSKGLDPTPVTFRSVIHRYCQ----------W--------GRVDDMLNLLDRMVKRKP 683

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
                  ++E                   LC  G ++EA  +   ++   + +   +C  
Sbjct: 684 FRTIYNHVIE------------------KLCDFGNLEEAEKLLGKVLRTASKLDANTCHV 725

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           L+    K+G    A  V     +       ++C  + + L+   D   V A  L+ R   
Sbjct: 726 LMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVL--DGNLVEADKLMLRFVE 783

Query: 736 VG 737
            G
Sbjct: 784 RG 785



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 203/482 (42%), Gaps = 58/482 (12%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK-L 162
           LI GY  +   E ALE    +    C PD   Y  V+    +++       +  +MV+  
Sbjct: 307 LIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDS 366

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N +P+ VT++ LI+ LSK G  + A+  L E   +G   +K  Y+ ++   CQ  R DEA
Sbjct: 367 NLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEA 426

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L + M    C+PD V Y A+++GFC+L R+DEA  +L+   K G  P   SY+ L++G
Sbjct: 427 KSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNG 486

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L  + +  EA        E    P+ + YGV++ G    GK+ +A  L  +M E+G  P 
Sbjct: 487 LCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPT 546

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               N LI+  C    + +A+    E   +    N   FT +I G C+ G ++ A  +  
Sbjct: 547 PVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLE 606

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT------LFLRLSQGG 455
            M  +   P    + AL D L K G L++A  L  KM   G +PT      +  R  Q G
Sbjct: 607 DMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWG 666

Query: 456 NRVHDKASL--------------QTMVEQYCTAGLIHKA--------------------- 480
            RV D  +L                ++E+ C  G + +A                     
Sbjct: 667 -RVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHV 725

Query: 481 --------------YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
                         YK+  Q+      PD+     +       GN+  A KL      +G
Sbjct: 726 LMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785

Query: 527 LR 528
           ++
Sbjct: 786 IQ 787


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 212/463 (45%), Gaps = 33/463 (7%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P    YNA++    R+     A      MV+    P+  TF+ LI G  ++ + EVA  +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
             +M  RG   +  +Y  +I G C+  R DEA  LF +M      PD   + AL+ G C 
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCD 242

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
             R +E L +L+  ++ G+ P   +Y+ L+D   R ++ +EA     +MF+  + P VV 
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG-------LLDQAR 363
             +++      G++  A+++   MR +G  P+ + YNA+++GFC+ G       LLDQ R
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
              VE       P+  T+ +LI G C +G +  A +L   ME  G       +N LID L
Sbjct: 363 ECGVE-------PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 424 CKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           CK G++++A  LF  +E  G  P              +  +  T++   C AG    A  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRP--------------NSVTFNTVINGLCKAGKFDVACT 461

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
            L  +  +G  PD  TY+  I   CK       L    E+  K ++P +V Y  +IN L 
Sbjct: 462 FLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLA 585
                  A RI+GQM   GC+P    Y + +   C   +   A
Sbjct: 522 NERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEA 564



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 233/546 (42%), Gaps = 61/546 (11%)

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGI-LPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           F  L+   S+   T + +++   M +     P   TY  +I  LC+      A R    M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
             SG  PD   +N+L+ G+C+ ++++ A  L       GF     SY+ LI+G   A R 
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           DEA     ++F E  +PD+  +  +++GL +AG+ ++ + +L  M+E G  P T  Y AL
Sbjct: 216 DEAL----ELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +  +C     ++A  +  E++    +P   T TI++   CR G +  A ++F  M   GC
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--------------------- 447
            P+V  +NA++ G C AG++ KA  L  +M E G  P +                     
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            LRL +G     D+ +   +++  C  G + +A  +   L   G  P+ +T+N++ING C
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K G  + A    + +   G  PD+ TY   I  L +    ++      +M Q    PS  
Sbjct: 452 KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
            Y  ++      R + LA  +W Q +      D                           
Sbjct: 512 NYTIVINRLFNERNYGLATRIWGQMVSQGCSPD--------------------------- 544

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
                  +  YT  +   C +G++ EA N+ + + +C+ IV   +   LI G    G  D
Sbjct: 545 -------VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTD 597

Query: 688 LAMDVF 693
            A+ + 
Sbjct: 598 RAVTIL 603



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 167/635 (26%), Positives = 267/635 (42%), Gaps = 49/635 (7%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  LI GY +    E A + F KM       D   Y A++           AL ++ EM
Sbjct: 166 TFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM 225

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P++ T + L+ GL  +G+ E  + ML +M + G  P    Y  ++   C+  +A
Sbjct: 226 TQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKA 281

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           +EA ++  +M DSG  P  V    ++N +C+  R+  A+ +  S    G  P + +Y+ +
Sbjct: 282 EEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           + G   A +  +A A   +M E  +EPDVV Y ++IRG    G +  A +LL  M   G+
Sbjct: 342 VQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGL 401

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             D Y YN LI   C  G +D+A SL   +  R   PN+ TF  +I G+C+ G  D A  
Sbjct: 402 AADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACT 461

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKA-GELE-------------KANLLFYKMEIG--- 442
               M  AG  P    ++  I+ LCK  G  E             K + + Y + I    
Sbjct: 462 FLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLF 521

Query: 443 --KNPTLFLRL-----SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +N  L  R+     SQG +   D  +  T V  YC  G + +A  ++ ++ +   + D
Sbjct: 522 NERNYGLATRIWGQMVSQGCS--PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVD 579

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE------- 548
            + YN+LI+G   +G  + A+ + K +      P+  T+  L+  L +    E       
Sbjct: 580 AMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKAT 639

Query: 549 ---------DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL-WLQYLRDISG 598
                    D F +F  M +N    S   Y S++      R+     SL  L    ++  
Sbjct: 640 SVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPL 699

Query: 599 RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
            +D     +  F +     +A   L  M        L  Y   L GL  +GQ   A  IF
Sbjct: 700 NEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759

Query: 659 SVLVECKAIVTPPSCVK-LIHGLCKRGYLDLAMDV 692
                 K   T     K +I G  ++G+ D+  D+
Sbjct: 760 RS-SRWKEYNTDEIVWKVIIDGFIRKGHADMCHDM 793



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 222/508 (43%), Gaps = 38/508 (7%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           ++++ Y + G    A+  F  M+   C+P+V+ YNA++           A+A+  +M + 
Sbjct: 305 IVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMREC 364

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P++VT++LLI G    G    A ++L  M   G+  +++TY ++I  LC+  + DEA
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             LF  ++  G  P+ V +N ++NG CK  + D A   L +    G+ P   +YS  I+ 
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIEN 484

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L + K   E   +  +M ++ ++P  V Y ++I  L        A ++   M  +G  PD
Sbjct: 485 LCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPD 544

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y   ++ +C+ G LD+A ++  E+ K  ++ +   +  LI G    G  D A  +  
Sbjct: 545 VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILK 604

Query: 403 KMEKAGCFPSVGMFNALI----------------DGLCKAGELEKANLLFYKMEIGKNPT 446
            M      P+   F  L+                  + K  EL     LF  M+    P+
Sbjct: 605 HMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPS 664

Query: 447 ---LFLRLSQG---GNRVHDKASLQTMVEQ----------------YCTAGLIHKAYKIL 484
               +L + +G     R+ +  SL +++++                +C   +   A+ +L
Sbjct: 665 SARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALL 724

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
             +   G LP++I Y  L++G    G  + A ++F+  + K    D + +  +I+G  R 
Sbjct: 725 CSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRK 784

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSL 572
              +    +   + Q  C PS   Y  L
Sbjct: 785 GHADMCHDMISMLEQMKCKPSDETYAML 812



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 242/590 (41%), Gaps = 78/590 (13%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            L+ G    G  E+ L    KMKE   +P    Y A++++  R+Q    A  +  EM   
Sbjct: 235 ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS 294

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
             +P +VT ++++N   + G+   A+++ + M  +G  PN +TY  ++ G C   +  +A
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA 354

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
             L  +M++ G  PD V YN L+ G C    +  A  LLR  E +G      +Y+ LID 
Sbjct: 355 MALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  + DEA + +  +    I P+ V +  +I GL +AGK   A   L +M   G  PD
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
           TY Y+  I+  C      +      E+ ++D  P+T  +TI+I  +        A +++ 
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWG 534

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           +M   GC P V  +   +   C  G L++A  +  +M+  +              + D  
Sbjct: 535 QMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT-------------IVDAM 581

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIIT------------------------ 498
           +  T+++ + + G   +A  IL  +    ++P+  T                        
Sbjct: 582 AYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSV 641

Query: 499 ---------------------------YNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
                                      Y S++ GF +   ++    L   ++ + L  + 
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNE 701

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT-----WSCRRRKFSLAF 586
             Y  L+N   ++    DA+ +   M  +G  P+   Y+ L++         R K     
Sbjct: 702 DIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRS 761

Query: 587 SLWLQYLRDISGRDDESMKS-IEEFLQKGEVE---NAIQGLLEMDFKLND 632
           S W +Y       D+   K  I+ F++KG  +   + I  L +M  K +D
Sbjct: 762 SRWKEY-----NTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSD 806



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/390 (21%), Positives = 155/390 (39%), Gaps = 16/390 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + +I  L K    D      D L    +   S  F  +I+G  K G  + A      M  
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMIS 468

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
               PD Y Y+  +    + +     L    EM++ +  P+ V ++++IN L       +
Sbjct: 469 AGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGL 528

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A ++  +M  +G  P+  TYT  +   C   R DEA  +  +MK      D +AYN L++
Sbjct: 529 ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLID 588

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSY----------------SCLIDGLFRAKRYD 290
           G   + + D A+ +L+       +P   ++                      +++     
Sbjct: 589 GHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELA 648

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           + +  +  M +  +      Y  ++ G SE  ++ +   L+S M+E  +  +   YNAL+
Sbjct: 649 DVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALV 708

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             FC L +   A +L   +     LPN   +  L+ G+   G  D A+++F         
Sbjct: 709 NCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYN 768

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME 440
               ++  +IDG  + G  +  + +   +E
Sbjct: 769 TDEIVWKVIIDGFIRKGHADMCHDMISMLE 798



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/369 (21%), Positives = 150/369 (40%), Gaps = 51/369 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + VI+ L K   FD+    L+ + S   +  +  +   I    K    ++ L    +M +
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS-------------- 172
            D +P    Y  V+N  F ++ + LA  ++ +MV   C P++VT++              
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563

Query: 173 ---------------------LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
                                 LI+G +  G+T+ A+ +L  MT    +PN FT+ I++ 
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLR 623

Query: 212 GLCQINRAD----------------EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
            L Q   A+                + + LF  MK +        Y ++L GF + RR+D
Sbjct: 624 HLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           E  +L+   +++        Y+ L++   + + Y +A+A    M      P+++ Y  ++
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLL 743

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            GL+  G+   A ++    R +    D   +  +I GF   G  D    +   + +    
Sbjct: 744 SGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCK 803

Query: 376 PNTHTFTIL 384
           P+  T+ +L
Sbjct: 804 PSDETYAML 812



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 115/301 (38%), Gaps = 44/301 (14%)

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           LF  + +        A+   ++   C    +  A + L  +  SG  PD  T+NSLI G+
Sbjct: 115 LFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+   +  A  LF ++  +G   D+V+Y  LI G     R ++A  +F +M Q       
Sbjct: 175 CRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHA 234

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKG--EVENAIQGLL 624
           A+ K L                        +GR +E +  +++  + G      A   L+
Sbjct: 235 ALVKGLCD----------------------AGRGEEGLCMLQKMKELGWRPTTRAYAALV 272

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
           ++              W    C++ + +EA  I + + +   +    +C  +++  C+ G
Sbjct: 273 DL--------------W----CREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREG 314

Query: 685 YLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACL 744
            +  A+ VF      G    P V  Y      F    K   A  LL +M+  G + D   
Sbjct: 315 RMSGAVRVFESMRFKG--CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVT 372

Query: 745 Y 745
           Y
Sbjct: 373 Y 373


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 207/415 (49%), Gaps = 33/415 (7%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M   G+ P+ FT  I+ + LC +NR  E       +   G  PD V YN L+ G C++ R
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 254 V-----------------DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +                 DEA  +    +  G +P + SYS L+ G   A + +E+   +
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            +M ++ ++P++V + V+I  L + GKV +A KLL    +RGI+ D   YN+LI GFC +
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G L  AR L + +  +    N  ++TILI G C+   V++A  L+N+M + G  P+V  +
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           + L+ GL + G++  AN LF  M+              G  V D       ++  C  G+
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMK------------ASGISV-DSCIYVIFLDGLCKNGV 287

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + +A ++  +L       D  +Y+ LI+G CK G +  A + FK+L  +GL+P+ VT   
Sbjct: 288 LFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNI 347

Query: 537 LINGLQRVDREEDA---FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           +I+G  RV++ + A   F    +M +NGCTP    Y +L+   C   K     +L
Sbjct: 348 MIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNL 402



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 182/349 (52%), Gaps = 3/349 (0%)

Query: 94  VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V  +S    ++I G  KVG  ++A E F +MK     P+V  Y+++++          + 
Sbjct: 58  VHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESK 117

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
            ++ EMV     PN+V F++LI+ L K GK   A K+L+   QRGI+ +  TY  +I G 
Sbjct: 118 RLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGF 177

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C+I     A +LFL M   GC  + ++Y  L+NG+CK+ +V+EA+ L     + G  P +
Sbjct: 178 CKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNV 237

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +YS L+ GL +  +  +A   +  M    I  D  +Y + + GL + G + +AM+L ++
Sbjct: 238 KTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNE 297

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           ++      D   Y+ LI G C  G ++ A     ++ +    PN  T  I+I G CR   
Sbjct: 298 LKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQ 357

Query: 394 VDDAQKLFNKMEKA---GCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           VD A  LF KMEK    GC P +  +N L+ G C++ +LE+   L +KM
Sbjct: 358 VDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 179/371 (48%), Gaps = 45/371 (12%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  ++ EM     +PN++++S L++G   +GK E + ++ +EM  +G+ PN   + ++I 
Sbjct: 81  AKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLID 140

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+  +  EA +L       G   D V YN+L++GFCK+  +  A  L  S    G   
Sbjct: 141 ILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEH 200

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY+ LI+G  +  + +EA   Y +M +    P+V  Y  ++ GL + GKV DA KL 
Sbjct: 201 NEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLF 260

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M+  GI  D+  Y   + G C  G+L +A  L  E+   +   +  +++ LI G+C+ 
Sbjct: 261 GVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKA 320

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G V+ A + F ++ + G  P+V   N +I G C+  +++KAN+LF KME           
Sbjct: 321 GKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKME----------- 369

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                                             ++ E+G  PDIITYN+L+ GFC+   
Sbjct: 370 ----------------------------------KMEENGCTPDIITYNTLLRGFCESNK 395

Query: 512 INGALKLFKEL 522
           +   + L  ++
Sbjct: 396 LEEVVNLLHKM 406



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 71/415 (17%)

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + PD+    ++   L    +V + +  ++ +  RG +PD   YN LIKG C +  +  A 
Sbjct: 6   LSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVAT 65

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
                              I+I G+C+ G  D+A+++F +M+  G  P+V  +++L+ G 
Sbjct: 66  ------------------CIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGF 107

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           C AG+LE++  LF +M + G  P L                   +++  C  G + +A K
Sbjct: 108 CCAGKLEESKRLFNEMVDQGVQPNL--------------VQFNVLIDILCKEGKVIEAKK 153

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L    + G + D++TYNSLI+GFCK+G+++ A KLF  +  KG   + ++Y  LING  
Sbjct: 154 LLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYC 213

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
           ++ + E+A  ++ +MPQ G  P+   Y +L+T                            
Sbjct: 214 KIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG--------------------------- 246

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                   LQ G+V +A +    M           Y I+L GLC++G + EA+ +F+ L 
Sbjct: 247 -------LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299

Query: 663 ECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV--CNYLLRSL 715
                +   S  +LI GLCK G +++A + F    + G  L+P V  CN ++   
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEG--LQPNVVTCNIMIHGF 352



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 132 DVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKML 191
           D+  YN++++   +      A  ++  M    C  N +++++LING  K  K E A+ + 
Sbjct: 166 DLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLY 225

Query: 192 DEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKL 251
           +EM Q G  PN  TY+ +++GL Q  +  +A +LF  MK SG S D   Y   L+G CK 
Sbjct: 226 NEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKN 285

Query: 252 RRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLY 311
             + EA+ L    +   F     SYS LIDGL +A + + A+ +++++ +E ++P+VV  
Sbjct: 286 GVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTC 345

Query: 312 GVMIRGLSEAGKVKDAMKL---LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            +MI G     +V  A  L   +  M E G  PD   YN L++GFC+   L++  +L  +
Sbjct: 346 NIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHK 405

Query: 369 IWKR 372
           ++KR
Sbjct: 406 MFKR 409



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 93/169 (55%), Gaps = 3/169 (1%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G  + G    A + FG MK      D  IY   L+   +  +   A+ ++ E+ 
Sbjct: 240 YSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             N   +  ++S LI+GL K+GK E+A +   +++Q G+ PN  T  I+I G C++ + D
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 359

Query: 221 EAYRLF---LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
           +A  LF    KM+++GC+PD + YN LL GFC+  +++E + LL    K
Sbjct: 360 KANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 408



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 94/189 (49%), Gaps = 14/189 (7%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV 103
           PQVG        KR  ++++   S +++ LL+        +    +++  +SV S ++ +
Sbjct: 229 PQVG--------KRPNVKTY---STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVI 277

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            + G  K G   +A+E F ++K ++ + D   Y+ +++   +     +A   + ++ +  
Sbjct: 278 FLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEG 337

Query: 164 CLPNIVTFSLLING---LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             PN+VT +++I+G   + +  K  +  + +++M + G  P+  TY  ++ G C+ N+ +
Sbjct: 338 LQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLE 397

Query: 221 EAYRLFLKM 229
           E   L  KM
Sbjct: 398 EVVNLLHKM 406


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 235/491 (47%), Gaps = 23/491 (4%)

Query: 110 KVGD--CEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPN 167
           K GD    +AL  F +M      P +  +N +     +K+ +L  +++   M  +  L N
Sbjct: 82  KSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKN 141

Query: 168 IVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFL 227
            ++ ++L+N L    +      +   + ++G  PN  T+T ++ GLC   +  EA R+F 
Sbjct: 142 FISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFK 201

Query: 228 KMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF---EKDGFV---PRLGSYSCLID 281
            M    C P  +    L++G C+      AL L  +      D  +   P + SYSC+ID
Sbjct: 202 IMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIID 261

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
            L +    + A  ++ +M E+ I P+VV Y  ++ GL  A + ++A +L  +M + G++P
Sbjct: 262 SLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLP 321

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   ++ LI   C +G + +A  L   + +R   P+T T+ ILI G C  GMVD+ +K+F
Sbjct: 322 DVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIF 381

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNR-VH 459
             M    C    G ++ L+   CK  E+  A +L+ +M + G  PT+      G  R + 
Sbjct: 382 LSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLF 441

Query: 460 DKASLQTMV-------------EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            +   Q MV             +  C  G + +A  +   L       ++  +NSLING 
Sbjct: 442 GEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGM 501

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+   +  A +LF  L  + L+PD VTY  +I GL +V + + A+ +F +M + GC P+ 
Sbjct: 502 CRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNV 561

Query: 567 AVYKSLMTWSC 577
             + +LM   C
Sbjct: 562 VTFNTLMRGLC 572



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 224/468 (47%), Gaps = 32/468 (6%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            F  L+ G    G   +A+  F  M  FDC+P       +++   R      AL ++  M
Sbjct: 179 TFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAM 238

Query: 160 VK------LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
           +       +NC P +V++S +I+ L K G  E A +   EM ++GI PN  TYT ++ GL
Sbjct: 239 INGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGL 298

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
           C  +  +EA RLF++M D G  PD V ++ L+   CK+ +V EA  L     +    P  
Sbjct: 299 CSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPST 358

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ LI+G   A   DE    +  M  ++ + D   Y ++++   +  +V  AM L  +
Sbjct: 359 RTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYRE 418

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI---LICGMCR 390
           M +RGI P    Y+           +  AR L  EI  +D + ++ +++I    + G+C+
Sbjct: 419 MMDRGIQPTVITYSK----------VGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCK 468

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLR 450
           NG V +A  +F  +E      +V +FN+LI+G+C++ +LE A  LF ++    N  L   
Sbjct: 469 NGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRL---CNEAL--- 522

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                    D  +   M+   C  G   KAY + +++ E G  P+++T+N+L+ G C   
Sbjct: 523 -------QPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNS 575

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMP 558
                ++L  ++  + L PD+ T   +++ L + +   +   +    P
Sbjct: 576 ERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTFP 623



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 223/555 (40%), Gaps = 64/555 (11%)

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
           + EAL            P L  ++ L   L + K+Y    +   +M    +  + +   +
Sbjct: 88  LHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNI 147

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           ++  L    +V +   +   +  +G  P+T  +  L+KG C  G + +A  +   +   D
Sbjct: 148 LLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFD 207

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG------CFPSVGMFNALIDGLCKAG 427
             P+  T  +LI G+CR G   +A KL   M          C P+V  ++ +ID LCK G
Sbjct: 208 CRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDG 267

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            +E+A   F +M E G  P +               +  +++   C+A    +A ++ ++
Sbjct: 268 LVERAKEFFVEMKEKGIFPNV--------------VTYTSLLHGLCSASEWEEAKRLFIE 313

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + + G LPD++T++ LI   CKVG +  A  LF  +  + + P + TY  LI G      
Sbjct: 314 MVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGM 373

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            ++  +IF  M    C      Y  LM   C+  +   A  L+ + +      D     +
Sbjct: 374 VDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMM------DRGIQPT 427

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK- 665
           +  + + G+       +   D  L+    + Y ++L GLC++G V EAL++F  L  CK 
Sbjct: 428 VITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKF 487

Query: 666 ----AIVTP---------------------------PSCVK---LIHGLCKRGYLDLAMD 691
               AI                              P  V    +I+GLCK G    A D
Sbjct: 488 ASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYD 547

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
           +FL   + G        N L+R L  + +  K+    LL +M +     DA        +
Sbjct: 548 LFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKI--VELLHKMAARKLSPDASTLLIVMDI 605

Query: 752 LPGPWNTREMENMSP 766
           L    N  E  N+ P
Sbjct: 606 LLKDENYHECLNLLP 620



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 82/170 (48%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
           S+   ++ V + G  K G   +AL+ F  ++      +V I+N+++N   R +   +A  
Sbjct: 453 SISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWE 512

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           ++  +      P++VT++++I GL K G+ + A  +  EM ++G  PN  T+  ++ GLC
Sbjct: 513 LFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLC 572

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
             +   +   L  KM     SPD      +++   K     E L LL +F
Sbjct: 573 LNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLLPTF 622



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 9/248 (3%)

Query: 464 LQTMVEQYCTAG--LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
           L+  +E  C +G   +H+A     Q+      P +  +N+L     K       + +   
Sbjct: 73  LEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGR 132

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   GL  + ++   L+N L  V R  + F +FG + + G  P+   + +L+   C   K
Sbjct: 133 MNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGK 192

Query: 582 FSLAFSLW-LQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEM-----DFKLN-DFQ 634
              A  ++ +  + D           I    + G   NA++    M     DF +N    
Sbjct: 193 IGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPT 252

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
           +  Y+  +  LC+DG V+ A   F  + E        +   L+HGLC     + A  +F+
Sbjct: 253 VVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFI 312

Query: 695 YTLKNGFI 702
             + +G +
Sbjct: 313 EMVDHGLL 320


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 214/436 (49%), Gaps = 22/436 (5%)

Query: 167 NIVTFSLLINGLSKSGKTEVAI---KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           N V ++  + GL KSGK E A    + + E       P+  T   VI  LC+  R D A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK--DGFVPRLGSYSCLID 281
            L   M   G  PD   ++ L+N  CK  ++ EA   L+   +          SY+ L++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 282 GLFRAKRYDEAYAWYRKMFEEK-IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            L +AK+  +A+A +  M  E+ + PDVV Y ++I G  +  ++  A KL   M +   V
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YNA + G    G +  A+ +  E+      P+  T++ LI G       D A +L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVH 459
           F  M   GC P+   +N L+ GLCK  + ++A+ LF KM E G +P              
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP-------------- 295

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           DK +  T++  +C  G I +A ++  ++   G+ PD++ YN L+ GF + G    A +LF
Sbjct: 296 DKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF 355

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQN-GCTPSPAVYKSLMTWSCR 578
           + +  +  +PD+V++  +I+GL +  R +DA  +F +M Q+ GC+P    Y SL+   C 
Sbjct: 356 QVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCG 415

Query: 579 RRKFSLAFSLWLQYLR 594
            ++ S A  ++ +  R
Sbjct: 416 EQRLSEAMKVFKEIDR 431



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/297 (36%), Positives = 170/297 (57%), Gaps = 3/297 (1%)

Query: 95  SVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLA 152
           SVV DV  + +LI G+ K+ +  +A + + +M + +C P+V  YNA LN   RK     A
Sbjct: 152 SVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 211

Query: 153 LAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISG 212
             VY EM+   C P+++T+S LI+G S + K + A ++ + M  RG  PN  TY  ++ G
Sbjct: 212 QGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHG 271

Query: 213 LCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPR 272
           LC+ ++ DEA+ LF KM + GC PD V Y  LL GFC + ++++A+ +       G  P 
Sbjct: 272 LCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 331

Query: 273 LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLS 332
           + +Y+CL+ G FRA +  EA   ++ M   + +PD V + +MI GLS+A ++ DA+++  
Sbjct: 332 VVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFE 391

Query: 333 DM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            M ++ G  PD   YN+LI G C    L +A  +  EI +    P+ H F +L+  M
Sbjct: 392 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 202/409 (49%), Gaps = 19/409 (4%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T   +I  L K+G+ + A+ +L+ M +RG  P+  T++++I+ LC+ ++  EA      M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 230 KD--SGCSPDFVAYNALLNGFCKLRRVDEALALLRSF-EKDGFVPRLGSYSCLIDGLFRA 286
               S  +    +YN+LLN  CK ++V +A A+  +   +   VP + SYS LIDG  + 
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
                A   Y++M +    P+V  Y   + GL   G++ DA  +  +M   G  PD   Y
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
           + LI GF      DQA  L   +  R   PN  T+  L+ G+C+    D+A +LF KM +
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQ 465
            GC P    +  L+ G C  G++E+A  +F +M   G +P              D  +  
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP--------------DVVAYN 336

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL-QL 524
            +++ +  AG   +A ++   +      PD +++N +I+G  K   ++ A+++F+ + Q 
Sbjct: 337 CLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQD 396

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            G  PD VTY +LI GL    R  +A ++F ++ +   +P P  +  L+
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLL 445



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 178/320 (55%), Gaps = 5/320 (1%)

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           + YN++LN   + +    A A++  MV + + +P++V++S+LI+G  K  +   A K+  
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           +M     +PN  TY   ++GL +  R  +A  ++ +M  +GCSPD + Y+ L++GF   R
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLAR 241

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           + D+A  L  +    G  P   +Y+CL+ GL +  + DEA+  +RKM E   +PD V Y 
Sbjct: 242 KHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYT 301

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ G    GK++ A+++  +M  +G  PD   YN L+KGF   G   +AR L   +  R
Sbjct: 302 TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK-AGCFPSVGMFNALIDGLCKAGELEK 431
           +  P+T +  I+I G+ +   +DDA ++F +ME+  GC P +  +N+LI GLC    L +
Sbjct: 362 ECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSE 421

Query: 432 ANLLFY---KMEIGKNPTLF 448
           A  +F    ++++  +P  F
Sbjct: 422 AMKVFKEIDRLKLSPDPHAF 441



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 20/446 (4%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY---NAVLNIAFRKQLFLLALAVYYEM 159
             + G  K G  E+A E+   M+E             ++V+    +      AL++   M
Sbjct: 16  AFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETM 75

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM--TQRGILPNKFTYTIVISGLCQIN 217
           +K    P++ T S+LIN L K+ K + A + L  M  T      + F+Y  +++ LC+  
Sbjct: 76  IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAK 135

Query: 218 RADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           +  +A+ +F  M  +    PD V+Y+ L++GFCK+  +  A  L +       VP + +Y
Sbjct: 136 KVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 195

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           +  ++GL R  R  +A   Y +M      PDV+ Y  +I G S A K   A +L   M  
Sbjct: 196 NAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMIS 255

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           RG  P+   YN L+ G C     D+A  L  ++ +R   P+  T+T L+ G C  G ++ 
Sbjct: 256 RGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQ 315

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A ++F++M   G  P V  +N L+ G  +AG+  +A  LF  M   +             
Sbjct: 316 AVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP---------- 365

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE-SGNLPDIITYNSLINGFCKVGNINGA 515
              D  S   M++    A  +  A ++  ++ +  G  PD++TYNSLI G C    ++ A
Sbjct: 366 ---DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGL 541
           +K+FKE+    L PD   +  L+  +
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 209/463 (45%), Gaps = 52/463 (11%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY---NALLNGFCKLRRVDEAL 258
           N   +T  + GLC+  + ++A+     M++S  S    +    ++++   CK  RVD AL
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE--EKIEPDVVLYGVMIR 316
           +LL +  K G+ P + ++S LI+ L +A +  EA  + + M             Y  ++ 
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 317 GLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            L +A KV  A  + S M  ER +VPD   Y+ LI GFC +  L +A  L  ++   + +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN  T+   + G+ R G + DAQ ++ +M  AGC P V  ++ LI G   A + ++A+ L
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           F  M           +S+G     +  +   ++   C      +A+++  ++ E G  PD
Sbjct: 250 FEAM-----------ISRGCRP--NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPD 296

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            +TY +L+ GFC VG I  A+++F E+  KG  PD V Y  L+ G  R  +  +A ++F 
Sbjct: 297 KVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQ 356

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M    C P    +  ++    + ++   A  ++ +  +D     D              
Sbjct: 357 VMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPD-------------- 402

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
                              L  Y   + GLC + ++ EA+ +F
Sbjct: 403 -------------------LVTYNSLIFGLCGEQRLSEAMKVF 426



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 190/409 (46%), Gaps = 38/409 (9%)

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTY----CYNALIKGFCDL 356
           E K   + V +   + GL ++GK++ A +    M+E            C+ ++I+  C  
Sbjct: 4   ESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCH-SVIQELCKA 62

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK------AGCF 410
           G +D A SL   + KR   P+  T ++LI  +C+   + +AQ+    M +      + CF
Sbjct: 63  GRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF 122

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
                +N+L++ LCKA ++ +A  +F  M   ++             V D  S   +++ 
Sbjct: 123 S----YNSLLNSLCKAKKVHQAFAIFSTMVSERSV------------VPDVVSYSILIDG 166

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
           +C    + +A K+  Q+ +   +P++ TYN+ +NG  + G I  A  +++E+   G  PD
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
            +TY TLI+G     + + A  +F  M   GC P+   Y  L+   C+  K   A  L+ 
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286

Query: 591 QYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG 649
           + +      D  +  + +  F   G++E A++   EM  K +D  +  Y   L G  + G
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346

Query: 650 QVKEALNIFSVLV--ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVF 693
           +  EA  +F V+V  ECK     P  V    +I GL K   LD A++VF
Sbjct: 347 KPGEARQLFQVMVSRECK-----PDTVSHNIMIDGLSKAKRLDDAVEVF 390



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 1/237 (0%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
           +E+ S   S     +  LI G+      ++A E F  M    C+P+   YN +L+   ++
Sbjct: 216 EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE 275

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY 206
                A  ++ +MV+  C P+ VT++ L+ G    GK E A+++ DEM  +G  P+   Y
Sbjct: 276 SKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 335

Query: 207 TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEK 266
             ++ G  +  +  EA +LF  M    C PD V++N +++G  K +R+D+A+ +    E+
Sbjct: 336 NCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395

Query: 267 D-GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
           D G  P L +Y+ LI GL   +R  EA   ++++   K+ PD   + V++  +  AG
Sbjct: 396 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 61/378 (16%)

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV---GMFNALIDGLCKAGELEKA- 432
           N   +T  + G+C++G ++ A +    M+++         G  +++I  LCKAG ++ A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL--MQLAES 490
           +LL   ++ G  P              D A+   ++ + C A  I +A + L  M    S
Sbjct: 70  SLLETMIKRGYCP--------------DMATHSMLINELCKADKIQEAQEFLQGMNRTIS 115

Query: 491 GNLPDIITYNSLINGFCKVGNINGALKLFKEL-QLKGLRPDSVTYGTLINGLQRVDREED 549
                  +YNSL+N  CK   ++ A  +F  +   + + PD V+Y  LI+G  ++D    
Sbjct: 116 TRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGR 175

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           A +++ QM    C P+   Y + +    R+                  GR  ++    EE
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRK------------------GRIADAQGVYEE 217

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE--CKAI 667
            +  G   + I                 Y+  + G     +  +A  +F  ++   C+  
Sbjct: 218 MISAGCSPDVIT----------------YSTLIHGFSLARKHDQAHELFEAMISRGCRPN 261

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAY 727
               +C  L+HGLCK    D A ++F   ++ G    P    Y      F    K   A 
Sbjct: 262 AVTYNC--LLHGLCKESKPDEAHELFRKMVERG--CDPDKVTYTTLLYGFCNVGKIEQAV 317

Query: 728 HLLCRMKSVGYDLDACLY 745
            +   M S G+D D   Y
Sbjct: 318 EVFDEMVSKGHDPDVVAY 335


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 243/543 (44%), Gaps = 68/543 (12%)

Query: 46  VGFRFFIWAAKR-KRLRSFASNSAVISMLLKPNGFDLYWQTL------DELRSGNV--SV 96
           V + FF W         S  S+  +I  L K   F      L      D L S +V  +V
Sbjct: 57  VSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 116

Query: 97  V---------SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           V         S +   L+  Y      + A++ F  M+    +P ++    +LN   + +
Sbjct: 117 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 176

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
           L  +   VY +MV++  +PNI  F++LI+   KSG  E A ++L+EM  R I P+ FTY 
Sbjct: 177 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 236

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +IS  C+     EA  +  +M+  G SPD V YN+L+ GFC+  R+ EAL L R  E +
Sbjct: 237 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFR--EIN 294

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G  P   +Y+ LIDG  R    +EA      M  E + P VV Y  ++R L E GK+KDA
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +LL++M ER + PD    N LI  +C +G +  A  ++ ++ +    P+  TF  LI G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
            C+   VD A++   +M  AG  PS   ++ L+D              +Y  +   N   
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS-------------YYDQD---NKEA 458

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
            +RL                                  +L+  G   DI  Y +LI   C
Sbjct: 459 VIRLPD--------------------------------ELSRKGLFVDISVYRALIRRLC 486

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           K+  I  A ++F  +Q KG++ DSV Y +L     +  +   A  +  +M +     +  
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLK 546

Query: 568 VYK 570
           +Y+
Sbjct: 547 IYR 549



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 170/327 (51%), Gaps = 17/327 (5%)

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           +   R   +A+ +       GF P L + + L++ L +A+  +  +  Y+KM    + P+
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           + ++ V+I    ++G V+ A +LL++M  R I PD + YN LI  +C  G+  +A  +Q 
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + +    P+  T+  LI G CR G + +A +LF ++   G  P+   +  LIDG C+  
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN 314

Query: 428 ELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           +LE+A  L   ME+ G +P +               +  +++ + C  G I  A ++L +
Sbjct: 315 DLEEALRLREVMEVEGLHPGV--------------VTYNSILRKLCEEGKIKDANRLLNE 360

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           ++E    PD +T N+LIN +CK+G++  A+K+ K++   GL+PD  T+  LI+G  ++  
Sbjct: 361 MSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 420

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            + A     +M   G +PS + Y  L+
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLV 447



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 161/394 (40%), Gaps = 71/394 (18%)

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI  L++  + K A  LL  +  R  +      NA+++                     
Sbjct: 80  TMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVR------------------IHD 121

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           D   N+   + L+     + M  DA ++F  M   G  P +     L++ L KA      
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMV 181

Query: 433 NLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             ++ KM  +G  P + +                 ++   C +G + KA ++L ++    
Sbjct: 182 WKVYKKMVRVGVVPNIHI--------------FNVLIHACCKSGDVEKAEQLLNEMESRF 227

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD+ TYN+LI+ +CK G    AL +   ++  G+ PD VTY +LI G  R  R  +A 
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           R+F ++  NG TP+   Y +L+   CR                         +  +EE L
Sbjct: 288 RLFREI--NGATPNHVTYTTLIDGYCR-------------------------VNDLEEAL 320

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           +  EV   ++GL           +  Y   L  LC++G++K+A  + + + E K      
Sbjct: 321 RLREVME-VEGLHP--------GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNV 371

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
           +C  LI+  CK G +  AM V    L+ G  L+P
Sbjct: 372 TCNTLINAYCKIGDMGSAMKVKKKMLEAG--LKP 403



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+ Y K+GD   A++   KM E   +PD + + A+++   +      A    +EM+  
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+  T+S L++        E  I++ DE++++G+  +   Y  +I  LC+I++ + A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            R+F  M+  G   D V Y +L   + K  +   A  +L   +K   +  L  Y C 
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCF 551


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 257/527 (48%), Gaps = 17/527 (3%)

Query: 51  FIWAAKRKRLRSFAS--NSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFV--LIS 106
           F W   ++ LRS      S +IS L +    D  W  L   R+      ++VF    LI 
Sbjct: 106 FDWMVLQQNLRSQWDKVTSTIISSLGRLGRSD--WAQLIFDRAVGAGFGNNVFVYSSLIC 163

Query: 107 GYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLP 166
            Y + G   KA+E F  MK   C+P++ +YNAV++   +   +  AL ++ EM++    P
Sbjct: 164 AYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSP 222

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           + +TF+ LI+   ++ + E   ++  EM +RGI  +  TY  +I+  C+  +      L 
Sbjct: 223 DRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALM 282

Query: 227 LKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             M K SG  P  + Y+ +++G+ KL    EA+AL +        P    Y+ ++D   R
Sbjct: 283 ETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 342

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
              +DEA++  R M E     D+V Y  ++    + GK ++AM LL +M++RG  P+   
Sbjct: 343 LGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILT 402

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ALI  +C  G    A +L  ++ K    P+   ++ L+ G C+NG  D+A  L  +M 
Sbjct: 403 YSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA 462

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQ 465
             G  P+V  +N+L+D   +   + +      +  +    T+ L+ S   ++       Q
Sbjct: 463 DNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQ-------Q 515

Query: 466 TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLK 525
           ++V+      L+  A ++  ++A++G  P+++T++S++N      ++  A  L + +++ 
Sbjct: 516 SLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVF 575

Query: 526 GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
             R   VT+G L+    RV R  DA  +F ++   G   + A Y +L
Sbjct: 576 DGRVYGVTHGLLMGFRIRVWR--DAETLFNELTTLGHNTAVAFYNAL 620



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 196/406 (48%), Gaps = 21/406 (5%)

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKF--TYTIVISGLCQINRADEAYRLFLKMK 230
            ++  L  SG+ E  +K  D M  +  L +++    + +IS L ++ R+D A  +F +  
Sbjct: 88  FIVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAV 147

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFV--PRLGSYSCLIDGLFRAKR 288
            +G   +   Y++L+  + +  ++ +A+ +   FE    V  P L  Y+ +ID   +   
Sbjct: 148 GAGFGNNVFVYSSLICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGD 204

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
           Y  A   +R+M E+ + PD + +  +I     A + ++  ++ ++M ERGI  D   YN 
Sbjct: 205 YPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNT 264

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSL-PNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           LI  +C  G +    +L   + K   + P+  T++ +I G  + G+  +A  LF +M   
Sbjct: 265 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 324

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
              P    +N ++D   + G  ++A+ +   ME                   D  +   +
Sbjct: 325 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAME-------------EAGFAKDIVTYNAL 371

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++ Y   G   +A  +L ++ + G  P+I+TY++LI+ +CK G    A+ LF++++  GL
Sbjct: 372 LDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGL 431

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           +PD V Y TL++G  +    ++A  +  +M  NG  P+   Y SL+
Sbjct: 432 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 477



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 197/446 (44%), Gaps = 58/446 (13%)

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           S +I+ L + G+++ A  + D     G   N F Y+ +I    +  +  +A  +F  MK 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             C P+ V YNA+++   K      AL + R   + G  P   +++ LI    RA R++E
Sbjct: 184 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM-RERGIVPDTYCYNALI 350
               + +M E  I  D V Y  +I      G++     L+  M +  GI P    Y+ +I
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMI 302

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            G+  LGL  +A +L  E+  ++  P+   +  ++    R G  D+A  +   ME+AG  
Sbjct: 303 DGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFA 362

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
             +  +NAL+D   K G+  +A  L  +M + G +P +               +   +++
Sbjct: 363 KDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL--------------TYSALID 408

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            YC  G    A  +   + ++G  PD++ Y++L++G CK G+ + AL L +E+   G+RP
Sbjct: 409 AYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRP 468

Query: 530 DSVTYGTLINGLQR-----------------------------------VDREED----- 549
           + +TY +L++   R                                   VD ++      
Sbjct: 469 NVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVL 528

Query: 550 -AFRIFGQMPQNGCTPSPAVYKSLMT 574
            A R+F +M +NG  P+   + S++ 
Sbjct: 529 AAARVFREMAKNGVKPNVVTFSSILN 554



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 160/377 (42%), Gaps = 84/377 (22%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +I GY K+G   +A+  F +M+  + +PD   YN +++I  R   F  A ++   M
Sbjct: 297 TYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 356

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +     +IVT++ L++   K GK   A+ +L+EM QRG  PN  TY+ +I   C+    
Sbjct: 357 EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFH 416

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            +A  LF  +K +G  PD V Y+ L++G CK    DEALALL     +G  P + +Y+ L
Sbjct: 417 RDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSL 476

Query: 280 IDG-------------------------LFRAKRYDE----------------AYAWYRK 298
           +D                          L +    D+                A   +R+
Sbjct: 477 LDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFRE 536

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY---NALIKGFCD 355
           M +  ++P+VV +  ++   S    V+DA  LL  MR    V D   Y   + L+ GF  
Sbjct: 537 MAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMR----VFDGRVYGVTHGLLMGF-- 590

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
                     ++ +W+                        DA+ LFN++   G   +V  
Sbjct: 591 ----------RIRVWR------------------------DAETLFNELTTLGHNTAVAF 616

Query: 416 FNALIDGLCKAGELEKA 432
           +NAL D L    + + A
Sbjct: 617 YNALTDVLWHFEQAQAA 633


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 247/515 (47%), Gaps = 34/515 (6%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L +F +M      PDV   N VL +      +    AV+ EM++L   P+IVT++ L++ 
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 178 LSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            SK G+ +    +L EM  RG   LPN  TY +VI+GL +    +EA  L  +M+ S  +
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA 300

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
             F  YN L+ G      V +   L    E +G +P + +Y+ +I GL ++ + + A A 
Sbjct: 301 SSFT-YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M    + PDV+ Y  ++ G  +AG  K+A+ L  D+R  G+ P    YN LI G+C 
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG L++AR L+ E+ ++  LP+ +T+TIL+ G      +   ++ F++M   G  P    
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +N  I      G++ K+   F   E+     +   +S       D  +   +++  C  G
Sbjct: 480 YNTRICAEITLGDISKS---FQLREV----IMLEGISS------DTVTYNILIDGLCKTG 526

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A +++MQ+  +G  PD ITY  LI+  C+ G +  A K F ++   GL P +VTY 
Sbjct: 527 NLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYT 586

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            +I+   R      A+  F +M + G  P+   Y  L+   CR  +  LA+         
Sbjct: 587 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAY--------- 637

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKL 630
                    +   E L++G V N     L +D KL
Sbjct: 638 ---------RHFYEMLERGLVPNKYTYTLLIDGKL 663



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 220/515 (42%), Gaps = 56/515 (10%)

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           EM   G+ P+      V+  L    R D+   +  +M   G  P  V YN LL+ F K  
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 253 RVDEALALLRSFEKDGF--VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           R D+   LL+  E  G   +P   +Y+ +I GL R K Y E  A   +      +     
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLAR-KGYLEEAAELVEEMRLSKKASSFT 304

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I GL   G VK    L  +M   GI+P    YNA+I G    G ++ A++  VE+ 
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 371 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELE 430
               LP+  T+  L+ G C+ G   +A  LF  + +AG  P+V  +N LIDG C+ G+LE
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 431 KANLLFYKM-EIGKNPTLFLR--LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           +A  L  +M E G  P ++    L +G + V   A  +   ++  + GL           
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL----------- 473

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
                 PD   YN+ I     +G+I+ + +L + + L+G+  D+VTY  LI+GL +    
Sbjct: 474 -----RPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNL 528

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI 607
           +DA  +  QM  NG  P    Y  L+   C R            +LR       E+ K  
Sbjct: 529 KDAEELMMQMISNGLQPDCITYTCLIHAHCER-----------GFLR-------EARKFF 570

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            + +  G   +A+                 YT+ +   C+ G +  A   F  ++E    
Sbjct: 571 NDMISDGLPPSAVT----------------YTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 614

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
               +   LIH LC+ G   LA   F   L+ G +
Sbjct: 615 PNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLV 649



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 162/334 (48%), Gaps = 14/334 (4%)

Query: 110 KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIV 169
           KV D +  +E+ G M      P V  YNA+++   +      A A + EM  +  LP+++
Sbjct: 320 KVDDLQLEMENEGIM------PTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVI 373

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T++ L+NG  K+G  + A+ +  ++ + G+ P   TY I+I G C++   +EA RL  +M
Sbjct: 374 TYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 433

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD----GFVPRLGSYSCLIDGLFR 285
            + GC PD   Y  L+ G   +     +LA+ R F  +    G  P   +Y+  I     
Sbjct: 434 VEQGCLPDVYTYTILMKGSHNVC----SLAMTREFFDEMLSKGLRPDCFAYNTRICAEIT 489

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
                +++     +  E I  D V Y ++I GL + G +KDA +L+  M   G+ PD   
Sbjct: 490 LGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCIT 549

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI   C+ G L +AR    ++      P+  T+T++I   CR G +  A   F KM 
Sbjct: 550 YTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKML 609

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           + G  P+   +N LI  LC+ G  + A   FY+M
Sbjct: 610 EEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEM 643



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 213/483 (44%), Gaps = 40/483 (8%)

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           L+  R     G  P +   + ++  L  A R+D+  A + +M +  IEP +V Y  ++  
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 318 LSEAGKVKDAMKLLSDMRERG--IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            S+ G+      LL +M  RG   +P+   YN +I G    G L++A  L  E+ +    
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKK 299

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            ++ T+  LI G+   G V     L  +ME  G  P+V  +NA+I GL ++G++E A   
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 436 FYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP 494
           F +M  +G  P              D  +  +++  YC AG   +A  +   L  +G  P
Sbjct: 360 FVEMRAMGLLP--------------DVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAP 405

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            ++TYN LI+G+C++G++  A +L +E+  +G  PD  TY  L+ G   V         F
Sbjct: 406 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFF 465

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQYLRDISGRDDESMKSIEEFLQK 613
            +M   G  P    Y + +         S +F L  +  L  IS         I+   + 
Sbjct: 466 DEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKT 525

Query: 614 GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
           G +++A + +++M           YT  +   C+ G ++EA   F+ ++   +   PPS 
Sbjct: 526 GNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMI---SDGLPPSA 582

Query: 674 VK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLL 730
           V    +IH  C+RG L  A   F   L+ G  + P    Y          N  +HA   L
Sbjct: 583 VTYTVIIHAYCRRGNLYSAYGWFRKMLEEG--VEPNEITY----------NVLIHA---L 627

Query: 731 CRM 733
           CRM
Sbjct: 628 CRM 630



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 150/330 (45%), Gaps = 39/330 (11%)

Query: 60  LRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKA 117
           + +  + +A+I  LL+    +       E+R+  + ++ DV  +  L++GY K G+ ++A
Sbjct: 334 MPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRA--MGLLPDVITYNSLLNGYCKAGNQKEA 391

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L  FG ++     P V  YN +++   R      A  +  EMV+  CLP++ T+++L+ G
Sbjct: 392 LLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKG 451

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKF--------------------------------- 204
                   +  +  DEM  +G+ P+ F                                 
Sbjct: 452 SHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSD 511

Query: 205 --TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY I+I GLC+     +A  L ++M  +G  PD + Y  L++  C+   + EA     
Sbjct: 512 TVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFN 571

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
               DG  P   +Y+ +I    R      AY W+RKM EE +EP+ + Y V+I  L   G
Sbjct: 572 DMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMG 631

Query: 323 KVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
           + + A +   +M ERG+VP+ Y Y  LI G
Sbjct: 632 RTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 225/428 (52%), Gaps = 18/428 (4%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKE 126
           +++ ++  + F+ +W   +E +   + VV DV  F ++I G  + G+ EK+ +   +++E
Sbjct: 135 LLTFVVGSSSFNQWWCFFNESK---IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
           F   P+V IY  +++   +K     A  +++EM K   + N  T+++LI+GL K+G  + 
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
             +M ++M + G+ PN  TY  V++ LC+  R  +A+++F +M++ G S + V YN L+ 
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G C+  + +EA  ++   + DG  P L +Y+ LIDG    ++  +A +  R +    + P
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V Y +++ G  + G    A K++ +M ERGI P    Y  LI  F     +++A  L+
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             + +    P+ HT+++LI G C  G +++A +LF  M +    P+  ++N ++ G CK 
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           G   +A  LF +ME  + P              + AS + M+E  C      +A  ++ +
Sbjct: 492 GSSYRALRLFREMEEKELPP-------------NVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 487 LAESGNLP 494
           + +SG  P
Sbjct: 539 MIDSGIGP 546



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 207/387 (53%), Gaps = 7/387 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FDL    L ELR    S    ++  LI G  K G+ EKA + F +M +F    + + Y  
Sbjct: 183 FDL----LVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTV 238

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++  F+  +      +Y +M +    PN+ T++ ++N L K G+T+ A K+ DEM +RG
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           +  N  TY  +I GLC+  +A+EA  +  +MK  G +P+ + YN L++GFC +R++ +AL
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKAL 358

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           +L R  +  G  P L +Y+ L+ G  +      A    ++M E  I+P  V Y ++I   
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTF 418

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
           + +  ++ A++L S M E G+ PD + Y+ LI GFC  G +++A  L   + ++   PN 
Sbjct: 419 ARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNE 478

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  ++ G C+ G    A +LF +ME+    P+V  +  +I+ LCK  + ++A  L  K
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 439 M---EIGKNPTLFLRLSQGGNRVHDKA 462
           M    IG + ++   +S+  N  H ++
Sbjct: 539 MIDSGIGPSDSILNLISRAKNDSHSRS 565



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 230/472 (48%), Gaps = 16/472 (3%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S ++ V+I+ Y +    + ++  F +M +    P    +N +L        F      + 
Sbjct: 94  SRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN 153

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
           E  K+  + ++ +F ++I G  ++G+ E +  +L E+ + G  PN   YT +I G C+  
Sbjct: 154 E-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
             ++A  LF +M   G   +   Y  L++G  K     +   +    ++ G  P L +Y+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYN 272

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           C+++ L +  R  +A+  + +M E  +  ++V Y  +I GL    K  +A +++  M+  
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSD 332

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDA 397
           GI P+   YN LI GFC +  L +A SL  ++  R   P+  T+ IL+ G C+ G    A
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 398 QKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGN 456
            K+  +ME+ G  PS   +  LID   ++  +EKA  L   ME +G  P           
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTP----------- 441

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
              D  +   ++  +C  G +++A ++   + E    P+ + YN+++ G+CK G+   AL
Sbjct: 442 ---DVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
           +LF+E++ K L P+  +Y  +I  L +  + ++A  +  +M  +G  PS ++
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSI 550



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 220/465 (47%), Gaps = 57/465 (12%)

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           Y  ++N + + + +D ++         GFVP    ++ L+  +  +  +++ + ++ +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           + K+  DV  +G++I+G  EAG+++ +  LL ++RE G  P+   Y  LI G C  G ++
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A+ L  E+ K   + N  T+T+LI G+ +NG+     +++ KM++ G FP++  +N ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 421 DGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQG---------GNRVHDKA------ 462
           + LCK G  + A  +F +M    +  N   +  L  G          N V D+       
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 463 ----SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +  T+++ +C    + KA  +   L   G  P ++TYN L++GFCK G+ +GA K+
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            KE++ +G++P  VTY  LI+   R D  E A ++   M + G TP    Y  L+   C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFC- 454

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPY 638
                            I GR +E+ +               + ++E  F+ N+     Y
Sbjct: 455 -----------------IKGRMNEASR-------------LFKSMVEKKFEPNE---VIY 481

Query: 639 TIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
              ++G C++G    AL +F  + E +      S   +I  LCK 
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 4/337 (1%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           T +   + K    + GF  +    +     +  + + V++ L K       ++  DE+R 
Sbjct: 237 TVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRE 296

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             VS     +  LI G  +     +A E   +MK     P++  YN +++     +    
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL++  ++      P++VT+++L++G  K G T  A K++ EM +RGI P+K TYTI+I 
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILID 416

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
              + +  ++A +L   M++ G +PD   Y+ L++GFC   R++EA  L +S  +  F P
Sbjct: 417 TFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEP 476

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
               Y+ ++ G  +      A   +R+M E+++ P+V  Y  MI  L +  K K+A  L+
Sbjct: 477 NEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             M + GI P     N + +   D      +RS+  E
Sbjct: 537 EKMIDSGIGPSDSILNLISRAKND----SHSRSMDEE 569



 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 18/226 (7%)

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           +  S  Y  +IN   +    + +   F +M   G  P    + +L+T+       S +F+
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVG----SSSFN 146

Query: 588 LWLQYLRDISGRDDESMKS----IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YT 639
            W  +  +   +    + S    I+   + GE+E +   L+E    L +F  +P    YT
Sbjct: 147 QWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVE----LREFGFSPNVVIYT 202

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             + G C+ G++++A ++F  + +   +    +   LIHGL K G      +++    ++
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH 262

Query: 700 GFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           G        N ++  L   KD +   A+ +   M+  G   +   Y
Sbjct: 263 GVFPNLHTYNCVMNQLC--KDGRTKDAFKVFDEMRERGVSCNIVTY 306


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 216/456 (47%), Gaps = 50/456 (10%)

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A++ F  M+    +P ++    +LN   + +L  +   VY +MV++  +PNI  F++L
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+   KSG  E A ++L+EM  R I P+ FTY  +IS  C+     EA  +  +M+  G 
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SPD V YN+L+ GFC+  R+ EAL L R  E +G  P   +Y+ LIDG  R    +EA  
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFR--EINGATPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
               M  E + P VV Y  ++R L E GK+KDA +LL++M ER + PD    N LI  +C
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
            +G +  A  ++ ++ +    P+  TF  LI G C+   VD A++   +M  AG  PS  
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++ L+D              +Y  +   N    +RL                       
Sbjct: 442 TYSWLVDS-------------YYDQD---NKEAVIRLPD--------------------- 464

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
                      +L+  G   DI  Y +LI   CK+  I  A ++F  +Q KG++ DSV Y
Sbjct: 465 -----------ELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVY 513

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +L     +  +   A  +  +M +     +  +Y+
Sbjct: 514 TSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYR 549



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 170/327 (51%), Gaps = 17/327 (5%)

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           +   R   +A+ +       GF P L + + L++ L +A+  +  +  Y+KM    + P+
Sbjct: 137 YANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPN 196

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           + ++ V+I    ++G V+ A +LL++M  R I PD + YN LI  +C  G+  +A  +Q 
Sbjct: 197 IHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQD 256

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + +    P+  T+  LI G CR G + +A +LF ++   G  P+   +  LIDG C+  
Sbjct: 257 RMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVN 314

Query: 428 ELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           +LE+A  L   ME+ G +P +               +  +++ + C  G I  A ++L +
Sbjct: 315 DLEEALRLREVMEVEGLHPGV--------------VTYNSILRKLCEEGKIKDANRLLNE 360

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           ++E    PD +T N+LIN +CK+G++  A+K+ K++   GL+PD  T+  LI+G  ++  
Sbjct: 361 MSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 420

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            + A     +M   G +PS + Y  L+
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLV 447



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 196/442 (44%), Gaps = 54/442 (12%)

Query: 3   STLNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRS 62
           S LN V+ I D        L  L+ F + + +T         Q   + F    +  R+  
Sbjct: 111 SVLNAVVRIHDDPDSNSQILSWLVIFYANSRMT---------QDAIQVF----EHMRVHG 157

Query: 63  FASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL 118
           F  +    + +++ L K    ++ W+   ++    V     +F VLI    K GD EKA 
Sbjct: 158 FKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAE 217

Query: 119 ESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGL 178
           +   +M+     PD++ YN ++++  +K +   AL +   M +    P+IVT++ LI G 
Sbjct: 218 QLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGF 277

Query: 179 SKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF 238
            + G+   A+++  E+   G  PN  TYT +I G C++N  +EA RL   M+  G  P  
Sbjct: 278 CREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGV 335

Query: 239 VAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRK 298
           V YN++L   C+  ++ +A  LL                                    +
Sbjct: 336 VTYNSILRKLCEEGKIKDANRLL-----------------------------------NE 360

Query: 299 MFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL 358
           M E K+EPD V    +I    + G +  AMK+   M E G+ PD + + ALI GFC L  
Sbjct: 361 MSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 420

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           +D A+    E+      P+  T++ L+         +   +L +++ + G F  + ++ A
Sbjct: 421 VDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA 480

Query: 419 LIDGLCKAGELEKANLLFYKME 440
           LI  LCK  ++E A  +F  M+
Sbjct: 481 LIRRLCKIDKIESAERIFTLMQ 502



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 161/394 (40%), Gaps = 71/394 (18%)

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            MI  L++  + K A  LL  +  R  +      NA+++                     
Sbjct: 80  TMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVR------------------IHD 121

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
           D   N+   + L+     + M  DA ++F  M   G  P +     L++ L KA      
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMV 181

Query: 433 NLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESG 491
             ++ KM  +G  P + +                 ++   C +G + KA ++L ++    
Sbjct: 182 WKVYKKMVRVGVVPNIHI--------------FNVLIHACCKSGDVEKAEQLLNEMESRF 227

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD+ TYN+LI+ +CK G    AL +   ++  G+ PD VTY +LI G  R  R  +A 
Sbjct: 228 IFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREAL 287

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           R+F ++  NG TP+   Y +L+   CR                         +  +EE L
Sbjct: 288 RLFREI--NGATPNHVTYTTLIDGYCR-------------------------VNDLEEAL 320

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           +  EV   ++GL           +  Y   L  LC++G++K+A  + + + E K      
Sbjct: 321 RLREVME-VEGLHP--------GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNV 371

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
           +C  LI+  CK G +  AM V    L+ G  L+P
Sbjct: 372 TCNTLINAYCKIGDMGSAMKVKKKMLEAG--LKP 403



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 110/238 (46%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  LI GY +V D E+AL     M+     P V  YN++L     +     A  +  EM
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +    P+ VT + LIN   K G    A+K+  +M + G+ P++FT+  +I G C+++  
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           D A     +M D+G SP +  Y+ L++ +      +  + L     + G    +  Y  L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           I  L +  + + A   +  M  + ++ D V+Y  +     +AGK   A  +L +M +R
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
            LI+ Y K+GD   A++   KM E   +PD + + A+++   +      A    +EM+  
Sbjct: 375 TLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA 434

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
              P+  T+S L++        E  I++ DE++++G+  +   Y  +I  LC+I++ + A
Sbjct: 435 GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESA 494

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
            R+F  M+  G   D V Y +L   + K  +   A  +L   +K   +  L  Y C 
Sbjct: 495 ERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCF 551


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 200/794 (25%), Positives = 344/794 (43%), Gaps = 122/794 (15%)

Query: 43  NPQVGFRFFIWAAKRKRLR-SFASNSAVISMLLKPNGFDLYWQTLDELR--SGNVSVVSD 99
           NP     FF  A+K+ + R   +S   ++ +L +   +      L+EL     N  + S 
Sbjct: 111 NPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA 170

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+  L+S Y                +EF   P V+  + +L +   K +   AL V+  M
Sbjct: 171 VWDELVSVY----------------REFSFSPTVF--DMILKVFAEKGMTKFALCVFDNM 212

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            K   +P++ + + L++ L ++G+   A+ + ++M   GILP+ F+YTI+++  C+  R 
Sbjct: 213 GKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRV 272

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           DEA+    +M+ S C P+ V YN+L++G+  L  V  A  +L    + G      +Y+ L
Sbjct: 273 DEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLL 332

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +  + ++A      M E+ +  D  +YGV+I     AG+V DA+++   M + G+
Sbjct: 333 IKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGL 392

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
             +T   N+LI G+C LG +++A  + V +   +  P+++ +  L+ G C+      A K
Sbjct: 393 KMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFK 452

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA----NLLFYKMEIGKNPTLFLRLSQGG 455
           L ++M   G   +V  +N L+  L   G +E A    NL+ +K  +  N   +  L    
Sbjct: 453 LCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLM-HKRGVAPNEVTYCTLLDAF 511

Query: 456 NRV--HDKASL-----------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
            +V   D+A +                  TM+  +C    + +A +I +++ E G  PD 
Sbjct: 512 FKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDE 571

Query: 497 ITYNSLINGFCKVGNINGALK-----------------------------------LFKE 521
           ITY +LI+G+CKVGN+  ALK                                   L  E
Sbjct: 572 ITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++ + L P+ VTYG+LI G       + A+  + +M   G  P+  +   +++   R  K
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 582 FSLAFSLWLQYLRDISG---------------RDDESMKSIEEFLQKG---EVEN----- 618
              A +L L  + DI                 R  E+ K ++ F +K     + N     
Sbjct: 692 IDEA-NLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYN 750

Query: 619 -AIQGLLEMDFKLNDFQLAPYTIWLIGLCQD--------------GQVKEALNIFSVLVE 663
            AI GL +    ++D +     + L G C D              G+V EA  +   ++ 
Sbjct: 751 IAITGLCKSK-NIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
              +        LI+GLCK G LD A  +F    + G  L P V  Y      + K  + 
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKG--LSPTVVTYNTLIDGYCKGGRT 867

Query: 724 VHAYHLLCRMKSVG 737
             A  L  +M+  G
Sbjct: 868 TEALELKDKMREEG 881



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/641 (24%), Positives = 262/641 (40%), Gaps = 88/641 (13%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + +LI GY K G  E+A +  G M E +   D ++Y  +++          AL +  
Sbjct: 326 SRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRD 385

Query: 158 EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQIN 217
            M+K+    N V  + LING  K G    A ++L  M    + P+ + Y  ++ G C+  
Sbjct: 386 AMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQE 445

Query: 218 RADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYS 277
              +A++L  +M + G +   V YN LL     +  V+ AL +     K G  P   +Y 
Sbjct: 446 DFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYC 505

Query: 278 CLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
            L+D  F+   +D A   ++    +     + LY  MI G  +  K+  A ++   M+E 
Sbjct: 506 TLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKEL 565

Query: 338 GIVPDTYCYNALIKGFCDLGLLDQARSLQ------------------------------- 366
           G  PD   Y  LI G+C +G L +A  L+                               
Sbjct: 566 GFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKL 625

Query: 367 ----VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
                E+  R+  PN  T+  LI G C  GM+D A   + KM   G  P++ + + ++  
Sbjct: 626 NGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSS 685

Query: 423 LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
           L + G++++ANL+ +++           +       H     ++ +    T  ++    K
Sbjct: 686 LYRHGKIDEANLILHQIA---------DIDPIAAHAHSVELPKSDLRHLETQKIVDSFGK 736

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
             M +  S N    I YN  I G CK  NI+   ++  +L LKG  PD+ TY +LI+   
Sbjct: 737 KAMSIPISNN----IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACS 792

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE 602
            V +  +AF +   M   G  P+  VY +L+   C+                  SG  D 
Sbjct: 793 AVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCK------------------SGNLDR 834

Query: 603 SMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
           + +   +  +KG     +                 Y   + G C+ G+  EAL +   + 
Sbjct: 835 ARRLFNKLARKGLSPTVVT----------------YNTLIDGYCKGGRTTEALELKDKMR 878

Query: 663 E---CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
           E   C + +T  +   LIHGL   G  + ++ +    +K G
Sbjct: 879 EEGICPSSITYST---LIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 150/350 (42%), Gaps = 37/350 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFD-CQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            +  LI GY KVG+  +AL+    M E D       +YN+++   FR +       +  E
Sbjct: 573 TYRTLIDGYCKVGNLVEALK-LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAE 631

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PN+VT+  LI G    G  + A     +M  +GI PN    + ++S L +  +
Sbjct: 632 MKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGK 691

Query: 219 ADEAYRLFLKMKD-----------------------------------SGCSPDFVAYNA 243
            DEA  +  ++ D                                   S    + + YN 
Sbjct: 692 IDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNI 751

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            + G CK + +D+   +L      GF P   +Y  LI       + +EA+     M    
Sbjct: 752 AITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAG 811

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           + P++V+Y  +I GL ++G +  A +L + +  +G+ P    YN LI G+C  G   +A 
Sbjct: 812 LVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEAL 871

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
            L+ ++ +    P++ T++ LI G+   G  + +  L N+M KAG   SV
Sbjct: 872 ELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSV 921



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 122/291 (41%), Gaps = 40/291 (13%)

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
           RV    S  +++      G   KA  +  Q+   G LPDI +Y  ++N +CK G ++ A 
Sbjct: 217 RVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAF 276

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
              KE++     P+ VTY +LI+G   +     A ++   M + G   +   Y  L+   
Sbjct: 277 NFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGY 336

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           C+R                                Q  + E  I  ++E +  +++    
Sbjct: 337 CKRG-------------------------------QMEQAEKLIGCMMEKNLFVDEH--- 362

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYT 696
            Y + +   C  G+V +AL I   +++    +    C  LI+G CK G+++ A +V L +
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEV-LVS 421

Query: 697 LKNGFILRPRVCNYLLRSLL--FSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +K+ + L+P   +Y   +LL  F K    + A+ L   M + G +     Y
Sbjct: 422 MKD-WNLKPD--SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTY 469


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/431 (30%), Positives = 212/431 (49%), Gaps = 41/431 (9%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK---FTYTIVISGLCQINRADEA 222
           P  +TFSLL   L ++G+   A  +L+     G  P     F  ++V+ GLC+  R D+A
Sbjct: 95  PRSLTFSLL--SLRRAGRLADAAGLLERAL--GSCPGSVSPFAASVVVDGLCKSGRVDDA 150

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            RL   M   G S + + YN+LL+ + + +       +L   E +G    +G+Y+ L+D 
Sbjct: 151 RRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDS 210

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L  A+   +  A + +M    +  DV LY  +I     AG ++ A K+L +    G+ P+
Sbjct: 211 LSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPN 270

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              Y  LIKGFC +G ++ A  L  ++  +    N   F  +I G CR GMVDDA K+  
Sbjct: 271 ERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKA 330

Query: 403 KMEKAGCFPSVGMFNALIDGL-------------------CKAGELEKANLLFYKM-EIG 442
            MEK G   ++  +N L  GL                   CK G++ +A  LF +M E G
Sbjct: 331 AMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 390

Query: 443 KNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
             P++               +   M+  Y   G I +A +   ++ + G +PD+ TY SL
Sbjct: 391 ATPSVL--------------TYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASL 436

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGC 562
           ++G C  G ++ ALKLF+E++ +G  P+ V Y  LI+GL +  R E AF+++  M + G 
Sbjct: 437 VHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGL 496

Query: 563 TPSPAVYKSLM 573
            P  ++Y +L+
Sbjct: 497 IPDDSLYSALV 507



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 186/380 (48%), Gaps = 20/380 (5%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           FA+ S V+  L K    D   + LD++    VS+ +  +  L+  Y +  D  +  E   
Sbjct: 132 FAA-SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 190

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            M+    +  V  Y  +++     +      A++ EM   N + ++  ++ +IN   ++G
Sbjct: 191 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 250

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A K+LDE    G+ PN+ TY ++I G C+I + + A  L   M+  G   + + +N
Sbjct: 251 NMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 310

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGF-------------------VPRLGSYSCLIDGL 283
            +++G+C+   VD+AL +  + EK G                    VP   +Y+ LI   
Sbjct: 311 TMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIH 370

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            +     EA   +R+M E+   P V+ Y VMI G ++ G++++A +   +M ++G VPD 
Sbjct: 371 CKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDV 430

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           Y Y +L+ G C  G +D A  L  E+ +R + PN   +T LI G+ + G  + A +L++ 
Sbjct: 431 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 490

Query: 404 MEKAGCFPSVGMFNALIDGL 423
           M KAG  P   +++AL+  L
Sbjct: 491 MLKAGLIPDDSLYSALVGSL 510



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 214/528 (40%), Gaps = 89/528 (16%)

Query: 238 FVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYR 297
           F AY            +D A++ L S +     PR  ++S L   L RA R  +A     
Sbjct: 67  FRAYADAGAACRAAEALDAAVSRLGSLD-----PRSLTFSLL--SLRRAGRLADAAGLLE 119

Query: 298 KMFEE---KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           +        + P      V++ GL ++G+V DA +LL DM   G+  +  CYN+L+  + 
Sbjct: 120 RALGSCPGSVSP--FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCY- 176

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
                         + ++D                 +G V   Q++   ME  G   +VG
Sbjct: 177 --------------VRQKD-----------------DGRV---QEILEIMENEGIEATVG 202

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +  L+D L  A ++ K   LF +M             +  N V D      ++  YC A
Sbjct: 203 TYTILVDSLSTARDISKVEALFNEM-------------KANNVVGDVYLYTAVINAYCRA 249

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G + +A K+L +   +G  P+  TY  LI GFCK+G +  A  L  ++Q +G+  + + +
Sbjct: 250 GNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 309

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR---KFSLAFSLWLQ 591
            T+I+G  R    +DA +I   M + G   +   Y +L    CR      +    +L   
Sbjct: 310 NTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISI 369

Query: 592 YLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
           + +D  G   E+ +   E  +KG   + +                 Y++ + G  + G++
Sbjct: 370 HCKD--GDMVEARRLFREMAEKGATPSVLT----------------YSVMIHGYAKKGRI 411

Query: 652 KEALNIFSVLVECKAIVTPP-SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +EA   F   +E K  V    +   L+HG C  G +D+A+ +F    + G    P V  Y
Sbjct: 412 REA-ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG--TEPNVVAY 468

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNT 758
                  +K+ +   A+ L   M   G   D  LY    S L G  +T
Sbjct: 469 TALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY----SALVGSLHT 512



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV------ 139
           L +++   V +   +F  +I GY + G  + AL+    M++   + ++Y YN +      
Sbjct: 294 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCR 353

Query: 140 -------------LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                        ++I  +    + A  ++ EM +    P+++T+S++I+G +K G+   
Sbjct: 354 MGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIRE 413

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A +   EM ++G +P+ +TY  ++ G C   + D A +LF +MK  G  P+ VAY AL++
Sbjct: 414 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 473

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
           G  K  R + A  L     K G +P    YS L+  L    R D
Sbjct: 474 GLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 517



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 39/195 (20%)

Query: 28  FLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLD 87
           +++ TT+ S+  K  +     R F   A++    S  + S +I    K        +   
Sbjct: 360 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRK 419

Query: 88  ELRSGNVSVVSDVF--FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           E+       V DV+    L+ G+   G  + AL+ F +MK+   +P+V  Y A       
Sbjct: 420 EMEKKGF--VPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA------- 470

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                                       LI+GL+K G++E A ++ D+M + G++P+   
Sbjct: 471 ----------------------------LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSL 502

Query: 206 YTIVISGLCQINRAD 220
           Y+ ++  L   NR D
Sbjct: 503 YSALVGSLHTDNRKD 517


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 240/507 (47%), Gaps = 20/507 (3%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KA E +  M      P V  +N +L+  F+         ++ EM + N   + VT+++LI
Sbjct: 257 KAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 316

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NG SKSGK E A +   +M + G     +++  +I G C+    DEA+ +  +M ++G  
Sbjct: 317 NGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIY 376

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    YN  +   C+  R+D+A  LL S       P + SY+ L+ G  + +++ EA   
Sbjct: 377 PTTSTYNIYIRALCEFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLL 432

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +  +    I P +V Y  +I GL E+G ++ A +L  +M  + I PD   Y  L+KGF  
Sbjct: 433 FDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVK 492

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVG 414
            G L  A  +  E+ ++   P+ + +T    G  R G  + A +L  +M  +    P + 
Sbjct: 493 NGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLT 552

Query: 415 MFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
           ++N  IDGLCK G LEKA     K+  +G  P              D  +  T++  Y  
Sbjct: 553 IYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVP--------------DHVTYTTVIRGYLE 598

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G    A  +  ++      P +ITY  LI+G  K G +  A +   E++ +G+RP+ +T
Sbjct: 599 KGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 658

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           +  L++G+ +    ++A+R   +M + G +P+   Y  L++  C   K+     L+ + L
Sbjct: 659 HNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEML 718

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAI 620
                 D  + +++ + L+K     A+
Sbjct: 719 DKEIEPDGYTHRALFKHLEKDHESMAL 745



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 252/559 (45%), Gaps = 49/559 (8%)

Query: 44  PQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQT-LDELRSGNVSVVSDVFF 102
           P++ FRFF W  ++  ++      A +  +L  N  DL  +  L   RS N+ +  ++  
Sbjct: 135 PEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAEN--DLMSEAYLVAERSINLGM-HEIDD 191

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI G                   FD    + + + +L +  +K +    L  + +M++ 
Sbjct: 192 LLIDG------------------NFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRK 233

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
             LP++   ++++  L  S     A ++ + M   GI+P   T+  ++    +    +  
Sbjct: 234 GFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            +++L+MK        V YN L+NGF K  +++EA       ++ GF     S++ LI+G
Sbjct: 294 DKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEG 353

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             +   +DEA+    +M    I P    Y + IR L E G++ DA +LLS M      PD
Sbjct: 354 YCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPD 409

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN L+ G+  +    +A  L  ++   +  P+  T+  LI G+C +G ++ AQ+L  
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF---------LRL- 451
           +M     +P V  +  L+ G  K G L  A  ++ +M   G  P  +         LRL 
Sbjct: 470 EMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLG 529

Query: 452 -SQGGNRVHDKASLQ-----------TMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
            S+   R+H++   +             ++  C  G + KA +   ++   G +PD +TY
Sbjct: 530 DSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTY 589

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            ++I G+ + G    A  L+ E+  K L P  +TY  LI+G  +  R E AF+   +M +
Sbjct: 590 TTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKK 649

Query: 560 NGCTPSPAVYKSLMTWSCR 578
            G  P+   + +L+   C+
Sbjct: 650 RGVRPNVMTHNALLHGMCK 668



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 219/470 (46%), Gaps = 27/470 (5%)

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
           F KM   G  P     N +L      R +++A  +  +    G +P + +++ ++D  F+
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A   +     + +M    IE   V Y ++I G S++GK+++A +   DM+  G     Y 
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           +N LI+G+C  GL D+A  +  E+      P T T+ I I  +C  G +DDA++L + M 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM- 405

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASL 464
                P V  +N L+ G  K  +  +A+LLF  ++ G  NP++               + 
Sbjct: 406 ---AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSI--------------VTY 448

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            T+++  C +G +  A ++  ++      PD+ITY +L+ GF K GN++ A +++ E+  
Sbjct: 449 NTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLR 508

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFS 583
           KG++PD   Y T   G  R+   E AFR+  +M  ++   P   +Y   +   C+     
Sbjct: 509 KGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLE 568

Query: 584 LAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWL 642
            A     +  R     D  +  + I  +L+KG  + A     EM  K     +  Y + +
Sbjct: 569 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLI 628

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLA 689
            G  + G++++A   F    E K     P+ +    L+HG+CK G +D A
Sbjct: 629 HGHAKAGRLEQA---FQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEA 675



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 172/362 (47%), Gaps = 5/362 (1%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           FD  W   DE+ +  +   +  + + I    + G  + A E    M      PDV  YN 
Sbjct: 360 FDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNT 415

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +++   + + F+ A  ++ ++   N  P+IVT++ LI+GL +SG  E A ++ +EMT + 
Sbjct: 416 LMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQL 475

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           I P+  TYT ++ G  +      A  ++ +M   G  PD  AY     G  +L   ++A 
Sbjct: 476 IYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAF 535

Query: 259 ALLRSF-EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
            L      +D   P L  Y+  IDGL +    ++A  + RK+F   + PD V Y  +IRG
Sbjct: 536 RLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRG 595

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             E G+ K A  L  +M  + + P    Y  LI G    G L+QA     E+ KR   PN
Sbjct: 596 YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPN 655

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T   L+ GMC+ G +D+A +   KME+ G  P+   +  LI   C   + E+   L+ 
Sbjct: 656 VMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYK 715

Query: 438 KM 439
           +M
Sbjct: 716 EM 717



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 209/509 (41%), Gaps = 81/509 (15%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E++  N+      + +LI+G+ K G  E+A    G M+        Y +N ++    ++ 
Sbjct: 299 EMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQG 358

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA-------------------- 187
           LF  A  V  EM+     P   T+++ I  L + G+ + A                    
Sbjct: 359 LFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMH 418

Query: 188 --IKM---------LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
             IKM          D++    I P+  TY  +I GLC+    + A RL  +M      P
Sbjct: 419 GYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYP 478

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           D + Y  LL GF K   +  A  +     + G  P   +Y+    G  R    ++A+  +
Sbjct: 479 DVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLH 538

Query: 297 RKMF-EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            +M  E+   PD+ +Y V I GL + G ++ A++    +   G+VPD   Y  +I+G+ +
Sbjct: 539 EEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 598

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G    AR L  E+  +   P+  T+ +LI G  + G ++ A +   +M+K G  P+V  
Sbjct: 599 KGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 658

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
            NAL+ G+CKAG +++A     KME                                   
Sbjct: 659 HNALLHGMCKAGNIDEAYRYLCKME----------------------------------- 683

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
                        E G  P+  +Y  LI+  C +      +KL+KE+  K + PD  T+ 
Sbjct: 684 -------------EEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHR 730

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            L   L++ D E  A    G+ P+    P
Sbjct: 731 ALFKHLEK-DHESMALDSSGKQPEQQQQP 758



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 1/300 (0%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
            D+L++GN++     +  LI G  + G+ E A     +M      PDV  Y  +L    +
Sbjct: 433 FDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVK 492

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKF 204
                +A  +Y EM++    P+   ++    G  + G +E A ++ +EM  +    P+  
Sbjct: 493 NGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLT 552

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
            Y + I GLC++   ++A     K+   G  PD V Y  ++ G+ +  R   A  L    
Sbjct: 553 IYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEM 612

Query: 265 EKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKV 324
                 P + +Y  LI G  +A R ++A+ +  +M +  + P+V+ +  ++ G+ +AG +
Sbjct: 613 LSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNI 672

Query: 325 KDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
            +A + L  M E GI P+ Y Y  LI   CDL   ++   L  E+  ++  P+ +T   L
Sbjct: 673 DEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRAL 732



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 21/220 (9%)

Query: 74  LKPNGFDLYWQTLDELRSGNVS---------VVSD-------VFFVLISGYYKVGDCEKA 117
           +KP+G+    +T+ ELR G+           V  D       ++ V I G  KVG+ EKA
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA 570

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           +E   K+      PD   Y  V+     K  F +A  +Y EM+     P+++T+ +LI+G
Sbjct: 571 IEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHG 630

Query: 178 LSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
            +K+G+ E A +   EM +RG+ PN  T+  ++ G+C+    DEAYR   KM++ G SP+
Sbjct: 631 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690

Query: 238 FVAYNALLNGFCKLRRVDEALALL-----RSFEKDGFVPR 272
             +Y  L++  C L + +E + L      +  E DG+  R
Sbjct: 691 KYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHR 730



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 45/105 (42%)

Query: 611 LQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTP 670
            + G++E   +  LEM  +  +F    Y I + G  + G+++EA      +      VTP
Sbjct: 285 FKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTP 344

Query: 671 PSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
            S   LI G CK+G  D A  V    L  G        N  +R+L
Sbjct: 345 YSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRAL 389


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 232/454 (51%), Gaps = 20/454 (4%)

Query: 170 TFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
           T + +++ L K G    A K++D M++   +PN    T +I GL +I R + A R+   M
Sbjct: 24  TNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM 83

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
             SG  PD + YN ++ GFCK R++  A+ LL      G  P + +Y+ +I  LF   ++
Sbjct: 84  VMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKF 143

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A  ++R        P ++ Y ++I  + +      A+++L DM   G  PD   YN+L
Sbjct: 144 DQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSL 203

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           +      G  + A  +   I      PN  T+  L+  +C  G+ D+  ++   M+K   
Sbjct: 204 VNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSH 263

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P+V  +N LI+GLCK G +E+A   F +M + +N +             D  +  T++ 
Sbjct: 264 PPTVVTYNILINGLCKCGLVERAINFFVQM-VSENCS------------PDIITYNTLLT 310

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C  G++ +A ++ + L++S   P +ITYN++I+G  + G ++ ALKL+ ++  KG+ P
Sbjct: 311 ALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAP 370

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D +T+ +L+ G   +D+ EDA  I  +M +     + + Y+ ++   CR ++  +A  + 
Sbjct: 371 DGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQV- 429

Query: 590 LQYLRDISGR--DDESMKS--IEEFLQKGEVENA 619
           L+ +  ISGR   DE + S  I+     G VE A
Sbjct: 430 LEMM--ISGRYKPDEEIYSTLIKSVADAGMVEEA 461



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 211/438 (48%), Gaps = 15/438 (3%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +L+   +K   + A  +   M ++N +PN    + LI GL + G+ E A ++L  M  
Sbjct: 26  NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
            G++P+  TY +++ G C+  +   A  L   M  SGC PD + YN ++       + D+
Sbjct: 86  SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+   R   + G +P L  Y+ LI+ +++      A      M  E   PD+V Y  ++ 
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN 205

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
             S+ GK +DA  ++ ++   G+ P+   YN+L+   C  GL D+   +   + K    P
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPP 265

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
              T+ ILI G+C+ G+V+ A   F +M    C P +  +N L+  LCK G +++A  +F
Sbjct: 266 TVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVF 325

Query: 437 YKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
             +     +P L               +  T+++     G + +A K+  Q+ E G  PD
Sbjct: 326 VLLSDSNCSPGLI--------------TYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPD 371

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
            IT+ SL+ GFC +  +  A+++ +E+  +  R +S  Y  +INGL R  R + A ++  
Sbjct: 372 GITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQVLE 431

Query: 556 QMPQNGCTPSPAVYKSLM 573
            M      P   +Y +L+
Sbjct: 432 MMISGRYKPDEEIYSTLI 449



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 34/432 (7%)

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N +L+  CK   + EA  L+    +   +P     + LI GL R  R + A    + M  
Sbjct: 26  NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             + PDV+ Y +M+ G  +  +++ A+ LL DM   G  PD   YN +I+   D G  DQ
Sbjct: 86  SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145

Query: 362 ARSLQVEIWK----RDSLPNTHTFTILI------CGMCRNGMVDDAQKLFNKMEKAGCFP 411
           A    VE W+    R  LP    +TILI      CG  R      A ++   M   GC+P
Sbjct: 146 A----VEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVR------ALEVLEDMAIEGCYP 195

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
            +  +N+L++   K G+ E A L+ Y +           LS G     +  +  +++   
Sbjct: 196 DLVTYNSLVNFASKEGKYEDAALIIYNI-----------LSHGME--PNAITYNSLLHSL 242

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C+ GL  +  +IL  + ++ + P ++TYN LING CK G +  A+  F ++  +   PD 
Sbjct: 243 CSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDI 302

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TY TL+  L +    ++A ++F  +  + C+P    Y +++    RR     A  L+ Q
Sbjct: 303 ITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQ 362

Query: 592 YLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
            +      D  + +S +  F    +VE+A++ L EM  + +    + Y + + GLC++ +
Sbjct: 363 MIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKR 422

Query: 651 VKEALNIFSVLV 662
           V  A+ +  +++
Sbjct: 423 VDIAIQVLEMMI 434



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 167/339 (49%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I   +  G  ++A+E +       C P +  Y  ++ + ++    + AL V  +M 
Sbjct: 130 YNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMA 189

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
              C P++VT++ L+N  SK GK E A  ++  +   G+ PN  TY  ++  LC     D
Sbjct: 190 IEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWD 249

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E   +   MK +   P  V YN L+NG CK   V+ A+        +   P + +Y+ L+
Sbjct: 250 EVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLL 309

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
             L +    DEA   +  + +    P ++ Y  +I GL+  G + +A+KL + M E+GI 
Sbjct: 310 TALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIA 369

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   + +L+ GFC +  ++ A  +  E+ KRD   N+  + ++I G+CRN  VD A ++
Sbjct: 370 PDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDIAIQV 429

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
              M      P   +++ LI  +  AG +E+A+ L  K+
Sbjct: 430 LEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKL 468



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 190/421 (45%), Gaps = 17/421 (4%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G  ++G  E+A      M      PDV  YN ++    +++    A+ +  +M    
Sbjct: 63  LIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSG 122

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C P+++T++ +I  L  +GK + A++      +RG LP    YTI+I  + +      A 
Sbjct: 123 CPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRAL 182

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +   M   GC PD V YN+L+N   K  + ++A  ++ +    G  P   +Y+ L+  L
Sbjct: 183 EVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSL 242

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
                +DE       M +    P VV Y ++I GL + G V+ A+     M      PD 
Sbjct: 243 CSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDI 302

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             YN L+   C  G++D+A  + V +   +  P   T+  +I G+ R G +D+A KL+N+
Sbjct: 303 ITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQ 362

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH--DK 461
           M + G  P      +L+ G C   ++E A      +EI         L + G R H  + 
Sbjct: 363 MIEKGIAPDGITHRSLVWGFCWIDQVEDA------VEI---------LREMGKRDHRINS 407

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
           ++ + ++   C    +  A ++L  +      PD   Y++LI      G +  A +L ++
Sbjct: 408 SAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQK 467

Query: 522 L 522
           L
Sbjct: 468 L 468



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/398 (22%), Positives = 172/398 (43%), Gaps = 47/398 (11%)

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
           +E D      ++  L + G + +A KL+  M     +P++ C   LI+G   +G +++A 
Sbjct: 18  VENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERAS 77

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +   +     +P+  T+ +++ G C+   +  A  L   M  +GC P V  +N +I  L
Sbjct: 78  RVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSL 137

Query: 424 CKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
              G+ ++A + F++ ++ +    +L              L  +V ++C  G + +A ++
Sbjct: 138 FDNGKFDQA-VEFWRGQLRRGCLPYLI---------PYTILIELVWKHC--GTV-RALEV 184

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L  +A  G  PD++TYNSL+N   K G    A  +   +   G+ P+++TY +L++ L  
Sbjct: 185 LEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCS 244

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
               ++   I   M +    P+   Y  L+   C+                         
Sbjct: 245 CGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCK------------------------- 279

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                     G VE AI   ++M  +     +  Y   L  LC++G V EAL +F +L +
Sbjct: 280 ---------CGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSD 330

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
                   +   +I GL +RGY+D A+ ++   ++ G 
Sbjct: 331 SNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGI 368



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 43/216 (19%)

Query: 83  WQTLDEL------RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY 136
           W  +DE+       S   +VV+  + +LI+G  K G  E+A+  F +M   +C PD+  Y
Sbjct: 248 WDEVDEILAIMKKTSHPPTVVT--YNILINGLCKCGLVERAINFFVQMVSENCSPDIITY 305

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           N +L    ++ +   AL V+  +   NC P ++T++ +I+GL++ G  + A+K+ ++M +
Sbjct: 306 NTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIE 365

Query: 197 RGILPNKFT-----------------------------------YTIVISGLCQINRADE 221
           +GI P+  T                                   Y +VI+GLC+  R D 
Sbjct: 366 KGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDI 425

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           A ++   M      PD   Y+ L+        V+EA
Sbjct: 426 AIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEA 461


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 185/680 (27%), Positives = 307/680 (45%), Gaps = 48/680 (7%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V  DVF   VLI  + KVG    A+     ++      D   YN V++      L   A 
Sbjct: 127 VSPDVFALNVLIHSFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHGLADEAY 183

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EMVK+  LP+ V+++ LI+G  K G    A  ++DE+++     N  T+TI++S  
Sbjct: 184 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSY 239

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             ++  +EAYR    M  SG  PD V +++++N  CK  +V E   LLR  E+    P  
Sbjct: 240 YNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 296

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+D LF+A  Y  A A Y +M    I  D+V+Y V++ GL +AG +++A K    
Sbjct: 297 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 356

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + E   VP+   Y AL+ G C  G L  A  +  ++ ++  +PN  T++ +I G  + GM
Sbjct: 357 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 416

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL--- 449
           +++A  L  KME     P+   +  +IDGL KAG+ E A  L  +M  IG     ++   
Sbjct: 417 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 476

Query: 450 ---------RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK---------ILMQLAESG 491
                    R+ +    V D  S    ++Q     LI   +K            ++ E G
Sbjct: 477 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 536

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              D+++YN LI+G  K G + GA   +K ++ KG+ PD  T+  ++N  ++    E   
Sbjct: 537 MPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 595

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           +++ +M   G  PS      ++   C   K   A  +  Q +      +  + +   +  
Sbjct: 596 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 655

Query: 612 QKGEVENAI----QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            K +  +AI    + LL    KL+      Y   +  LC+ G  K+A  +   +     I
Sbjct: 656 SKHKRADAIFKTHETLLSYGIKLSR---QVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVH 725
               +   L+HG     ++  A+  +   ++ G  + P V  Y  ++R L  +   K+V 
Sbjct: 713 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG--ISPNVATYNTIIRGLSDAGLIKEVD 770

Query: 726 AYHLLCRMKSVGYDLDACLY 745
            +  L  MKS G   D   Y
Sbjct: 771 KW--LSEMKSRGMRPDDFTY 788



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/583 (24%), Positives = 264/583 (45%), Gaps = 59/583 (10%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M+E    P+   Y  +++  F+  ++  ALA+Y +MV      ++V +++L++GL K+G
Sbjct: 286 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 345

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A K    + +   +PN  TYT ++ GLC+      A  +  +M +    P+ V Y+
Sbjct: 346 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 405

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +++NG+ K   ++EA++LLR  E    VP   +Y  +IDGLF+A + + A    ++M   
Sbjct: 406 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 465

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM---------------------------- 334
            +E +  +   ++  L   G++K+   L+ DM                            
Sbjct: 466 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 525

Query: 335 -------RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                  +ERG+  D   YN LI G    G +    + +  + ++   P+  TF I++  
Sbjct: 526 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK-GMREKGIEPDIATFNIMMNS 584

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKN 444
             + G  +   KL++KM+  G  PS+   N ++  LC+ G++E+A  +  +M   EI  N
Sbjct: 585 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 644

Query: 445 PT---LFLRLSQGGNR------VHD-------KASLQ---TMVEQYCTAGLIHKAYKILM 485
            T   +FL  S    R       H+       K S Q   T++   C  G+  KA  ++ 
Sbjct: 645 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 704

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G +PD +T+NSL++G+    ++  AL  +  +   G+ P+  TY T+I GL    
Sbjct: 705 DMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG 764

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESM 604
             ++  +   +M   G  P    Y +L++   +      + +++ + + D +  +     
Sbjct: 765 LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYN 824

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
             I EF   G++  A + L EM  +      + Y   + GLC+
Sbjct: 825 VLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 240/549 (43%), Gaps = 84/549 (15%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+ VL+ G +K GD  +A ++F  + E +  P+V  Y A+++   +      A  +  +M
Sbjct: 333 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 392

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ + +PN+VT+S +ING  K G  E A+ +L +M  + ++PN FTY  VI GL +  + 
Sbjct: 393 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 452

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  L  +M+  G   +    +AL+N   ++ R+ E   L++     G      +Y+ L
Sbjct: 453 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 512

Query: 280 IDGLFRA-----------KRYDEAYAW-----------------------YRKMFEEKIE 305
           ID  F+            +  +    W                       Y+ M E+ IE
Sbjct: 513 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIE 572

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD+  + +M+    + G  +  +KL   M+  GI P     N ++   C+ G +++A  +
Sbjct: 573 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 632

Query: 366 QVEIWKRDSLPNTHTFTI-----------------------------------LICGMCR 390
             ++   +  PN  T+ I                                   LI  +C+
Sbjct: 633 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 692

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFL 449
            GM   A  +   ME  G  P    FN+L+ G      + KA +     ME G +P +  
Sbjct: 693 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV-- 750

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                       A+  T++     AGLI +  K L ++   G  PD  TYN+LI+G  K+
Sbjct: 751 ------------ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 798

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN+ G++ ++ E+   GL P + TY  LI+    V +   A  +  +M + G +P+ + Y
Sbjct: 799 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 858

Query: 570 KSLMTWSCR 578
            ++++  C+
Sbjct: 859 CTMISGLCK 867



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 188/406 (46%), Gaps = 57/406 (14%)

Query: 187 AIKMLDEMTQRGILP-----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           A + L  M   G++P     N   +   ++GL      D+   ++ KM   G SPD  A 
Sbjct: 79  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVH----DQVSLIYSKMIACGVSPDVFAL 134

Query: 242 NALLNGFCKLRRVDEALALLRS--FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           N L++ FCK+ R+  A++LLR+     D       +Y+ +I GL      DEAY +  +M
Sbjct: 135 NVLIHSFCKVGRLSFAISLLRNRVISIDTV-----TYNTVISGLCEHGLADEAYQFLSEM 189

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE----------------------- 336
            +  I PD V Y  +I G  + G    A  L+ ++ E                       
Sbjct: 190 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 249

Query: 337 -----RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                 G  PD   ++++I   C  G + +   L  E+ +    PN  T+T L+  + + 
Sbjct: 250 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 309

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            +   A  L+++M   G    + ++  L+DGL KAG+L +A   F             ++
Sbjct: 310 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-------------KM 356

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N+V +  +   +V+  C AG +  A  I+ Q+ E   +P+++TY+S+ING+ K G 
Sbjct: 357 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 416

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           +  A+ L ++++ + + P+  TYGT+I+GL +  +EE A  +  +M
Sbjct: 417 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 167/422 (39%), Gaps = 93/422 (22%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT------------------------ 343
           V L+  + R      ++  A + LS M   G+VPD+                        
Sbjct: 60  VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 119

Query: 344 ------------YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                       +  N LI  FC +G L  A SL   +  R    +T T+  +I G+C +
Sbjct: 120 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEH 176

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G+ D+A +  ++M K G  P    +N LIDG CK G   +A              L   +
Sbjct: 177 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK------------ALVDEI 224

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+     H       ++  Y     I +AY+    +  SG  PD++T++S+IN  CK G 
Sbjct: 225 SELNLITH-----TILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGK 276

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +     L +E++   + P+ VTY TL++ L + +    A  ++ QM   G      VY  
Sbjct: 277 VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 336

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           LM    +                  +G   E+ K+ +  L+  +V N +           
Sbjct: 337 LMDGLFK------------------AGDLREAEKTFKMLLEDNQVPNVVT---------- 368

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + GLC+ G +  A  I + ++E   I    +   +I+G  K+G L+ A+ 
Sbjct: 369 ------YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 422

Query: 692 VF 693
           + 
Sbjct: 423 LL 424



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 48/351 (13%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F ++++   K GD E  L+ + KMK    +P +   N V+ +         A+ +  +M+
Sbjct: 578 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 637

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +   PN+ T+ + ++  SK  + +   K  + +   GI  ++  Y  +I+ LC++    
Sbjct: 638 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 697

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +   M+  G  PD V +N+L++G+     V +AL+      + G  P + +Y+ +I
Sbjct: 698 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 757

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM------------ 328
            GL  A    E   W  +M    + PD   Y  +I G ++ G +K +M            
Sbjct: 758 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 817

Query: 329 -----------------------KLLSDMRERGIVPDTYCYNALIKGFCDL--------- 356
                                  +LL +M +RG+ P+T  Y  +I G C L         
Sbjct: 818 PKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWN 877

Query: 357 ---GLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                L +A+ L  E + ++  +P   T   +     + GM  DA++   +
Sbjct: 878 KKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 928


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 231/499 (46%), Gaps = 16/499 (3%)

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
           G++ +  +V   +++ + + G   +A +   +M+       V   N VL +      F+ 
Sbjct: 105 GSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVY 164

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  V+  M +    P+  +F  L+    + GK E    +L  M + G   +  T T+V+ 
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LC+  R  +    F +M ++G  P+ V Y A ++G CK R V +A  +L      G  P
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFE-EKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
            + +++ LIDGL +    + A+  + K+ +    +P+V  Y VMI G    GK+  A  L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344

Query: 331 LSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCR 390
           L  M E+G+ P+T  Y  LI G C  G  D+A  L  ++ +   LPN +T+  +I G C+
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 449
            G + +A K+       G       +  LI   CK G +  A  LF +M E G  P    
Sbjct: 405 KGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP---- 460

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                     D  +  +++  YC    + ++ K   +    G LP   TY S+I G+CKV
Sbjct: 461 ----------DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKV 510

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G    AL++F+ +   G   DS+TYG LI+GL +  R E+A  ++  M      P     
Sbjct: 511 GRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTR 570

Query: 570 KSLMTWSCRRRKFSLAFSL 588
            +L    CRR K S+A S+
Sbjct: 571 VTLTFEYCRREKTSIAVSV 589



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 207/411 (50%), Gaps = 14/411 (3%)

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           ++G    A K+ D MT+ G+ P++ ++  ++   C+  + +E   L   M   G S D  
Sbjct: 158 ETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNA 217

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
               ++   C+  R  +     R   + G  P + +Y+  IDGL + +   +A+    +M
Sbjct: 218 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 277

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL-LSDMRERGIVPDTYCYNALIKGFCDLGL 358
               ++P+V  +  +I GL + G  + A +L L  ++     P+ + Y  +I G+C  G 
Sbjct: 278 VGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGK 337

Query: 359 LDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNA 418
           L +A  L V + ++   PNT+T+T LI G C+ G  D A +L NKM++ G  P++  +NA
Sbjct: 338 LARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397

Query: 419 LIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +IDG CK G++++A    YK+         LR++       DK +   ++ ++C  G I 
Sbjct: 398 VIDGFCKKGKIQEA----YKV---------LRMATSQGLKFDKITYTILITEHCKQGHIT 444

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A  +  ++ E+G  PDI  Y SLI+ +C+   +  + K F +  + GL P   TY ++I
Sbjct: 445 YALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMI 504

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
            G  +V R   A R+F +M QNGC      Y +L++  C+  +   A +L+
Sbjct: 505 AGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 555



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 236/539 (43%), Gaps = 84/539 (15%)

Query: 174 LINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
           ++    ++G+   A  M+ EM   G+     T   V+    +      A ++F  M  +G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
             PD  ++ AL+   C+  +V+E  ALL +  + GF   L + +C               
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGF--SLDNATCT-------------- 220

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
                              V++R L E G+ KD  +    M E G  P+   Y A I G 
Sbjct: 221 -------------------VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGL 261

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF-PS 412
           C    + QA  +  E+  R   PN +T T LI G+C+ G  + A +LF K+ K+  + P+
Sbjct: 262 CKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPN 321

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
           V  +  +I G C+ G+L +A +L  +M E G  P              +  +  T++  +
Sbjct: 322 VHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP--------------NTNTYTTLIGGH 367

Query: 472 CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
           C  G   +A++++ ++ + G LP+I TYN++I+GFCK G I  A K+ +    +GL+ D 
Sbjct: 368 CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDK 427

Query: 532 VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
           +TY  LI    +      A  +F +M +NGC P    Y SL++  C++R+   +   + +
Sbjct: 428 ITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDK 487

Query: 592 ------------YLRDISG-----RDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
                       Y   I+G     R   +++  E  +Q G   ++I              
Sbjct: 488 CLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSIT------------- 534

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
              Y   + GLC++ +++EA  ++  +++ + +    + V L    C+R    +A+ V 
Sbjct: 535 ---YGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 590



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 4/338 (1%)

Query: 103 VLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
            LI G  K+G  E+A   F K+ K    +P+V+ Y  ++    R+     A  +   MV+
Sbjct: 291 TLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVE 350

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               PN  T++ LI G  K G  + A +++++M Q G LPN +TY  VI G C+  +  E
Sbjct: 351 QGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQE 410

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           AY++       G   D + Y  L+   CK   +  AL L     ++G  P + +Y+ LI 
Sbjct: 411 AYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIS 470

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
              + ++ +E+  ++ K     + P    Y  MI G  + G+   A+++   M + G   
Sbjct: 471 TYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFA 530

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D+  Y ALI G C    L++A++L   +  +  +P   T   L    CR      A  + 
Sbjct: 531 DSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVL 590

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           ++++K      V   + ++  L   G+++ A+L   K+
Sbjct: 591 DRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKV 625



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 179/386 (46%), Gaps = 21/386 (5%)

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           E G    A K+   M   G+ PD   + AL+   C  G +++  +L   +W+     +  
Sbjct: 158 ETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNA 217

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T T+++  +C  G   D  + F +M + G  P+V  + A IDGLCK   +++A  +  +M
Sbjct: 218 TCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 277

Query: 440 EIGKN--PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDI 496
            +G+   P ++              +  T+++  C  G   +A+++ ++L +S +  P++
Sbjct: 278 -VGRGLKPNVY--------------THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNV 322

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQ 556
            TY  +I G+C+ G +  A  L   +  +GL+P++ TY TLI G  +    + AF +  +
Sbjct: 323 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 382

Query: 557 MPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKG 614
           M Q G  P+   Y +++   C++ K   A+ + L+       + D+   +I   E  ++G
Sbjct: 383 MKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKV-LRMATSQGLKFDKITYTILITEHCKQG 441

Query: 615 EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV 674
            +  A+     M        +  YT  +   CQ  Q++E+   F   +    + T  +  
Sbjct: 442 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 501

Query: 675 KLIHGLCKRGYLDLAMDVFLYTLKNG 700
            +I G CK G   LA+ VF   ++NG
Sbjct: 502 SMIAGYCKVGRSTLALRVFERMVQNG 527



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 5/306 (1%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + V+I GY + G   +A     +M E   +P+   Y  ++    +   F  A  +  +M
Sbjct: 324 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
            +   LPNI T++ +I+G  K GK + A K+L   T +G+  +K TYTI+I+  C+    
Sbjct: 384 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 443

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  LF +M ++GC PD  AY +L++ +C+ R+++E+          G +P   +Y+ +
Sbjct: 444 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 503

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           I G  +  R   A   + +M +     D + YG +I GL +  ++++A  L   M ++ +
Sbjct: 504 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 563

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR-DSLPNTHTFTILICGMCRNGMVDDAQ 398
           VP       L   +C      +  S+ V +  R D     HT  +++  +   G VD A 
Sbjct: 564 VPCEVTRVTLTFEYCR----REKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAAS 619

Query: 399 KLFNKM 404
               K+
Sbjct: 620 LFLKKV 625



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 7/271 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +AVI    K       ++ L    S  +      + +LI+ + K G    AL+ F +M E
Sbjct: 396 NAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE 455

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
             C PD+  Y ++++   +++    +   + + + +  LP   T++ +I G  K G++ +
Sbjct: 456 NGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTL 515

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++ + M Q G   +  TY  +ISGLC+ +R +EA  L+  M D    P  V    L  
Sbjct: 516 ALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTF 575

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +C+  +   A+++L   +K     ++ +   ++  L      D A  + +K+ +E    
Sbjct: 576 EYCRREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAV 632

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRER 337
           D   Y   I    E  +      L S+M E+
Sbjct: 633 DHATYTGFINSCYENNR----YALASEMSEK 659


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 231/477 (48%), Gaps = 51/477 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++++  LL+    +L W  L E++S  + + + +  + ISGY   G+ +   +   +MK 
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKY 249

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  Y  V++   +  L   A ++ ++M ++    + V+ S +++G  K GK+E 
Sbjct: 250 LGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE 309

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +L+      + PN F +   IS LC      +A ++F  M + G  PD  +Y  ++ 
Sbjct: 310 AMDVLEVFN---LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA 366

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+CK++ +  AL  L    K G  P + +Y+ LID   +    + A   +++M  E + P
Sbjct: 367 GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVP 426

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DVV Y  ++ G  + G ++ A +LLS MR  G+ PD   YN LI G    GL+++A+ + 
Sbjct: 427 DVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDIL 486

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+ +R   P+  TFT +I G    G  ++A  LF  M +    P V   +AL++G C+ 
Sbjct: 487 DELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRT 546

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
             + +AN+LF+KM                                               
Sbjct: 547 RCMAEANVLFHKM----------------------------------------------- 559

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++G   D+I YNSLI+GFC +GNI+ A  L   +   G+ P+++T+  L+ G ++
Sbjct: 560 -LDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEK 615



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 230/493 (46%), Gaps = 24/493 (4%)

Query: 89  LRSGNVSVVS-DVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVY--IYNAVLNIAFR 145
           L SGN++  + D+   LIS  Y  G+ E     F K+ E   +  V   +Y  ++N   +
Sbjct: 107 LVSGNMNHKAMDLLLHLIS--YNSGE-EGWHNIFLKIHETHTKRRVLETVYGMLVNCYVK 163

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
           + +  +AL +  +M  LN  P I   + L+  L +S +  +A   L EM  +G+  N   
Sbjct: 164 ENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASI 223

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
            ++ ISG C     D  ++L ++MK  G  PD VAY  +++  CK+  + EA ++L    
Sbjct: 224 ISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMT 283

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G      S S ++DG  +  + +EA           + P++ ++   I  L   G + 
Sbjct: 284 QMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNML 340

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A K+  DM E G++PD + Y  ++ G+C +  +  A     ++ KR   P+  T+T+LI
Sbjct: 341 KAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLI 400

Query: 386 CGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKN 444
              C+ G ++ A+ LF +M   G  P V  +N L++G  K G L+KA  LL      G +
Sbjct: 401 DSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVS 460

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           P              D  +   ++      GL+++A  IL +L   G  PD++T+ ++I 
Sbjct: 461 P--------------DLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIG 506

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GF   GN   A  LF  +    L PD VT   L+NG  R     +A  +F +M   G   
Sbjct: 507 GFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKA 566

Query: 565 SPAVYKSLMTWSC 577
              +Y SL+   C
Sbjct: 567 DVILYNSLIHGFC 579



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 200/425 (47%), Gaps = 16/425 (3%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
             + +L+N   K   T+VA+K++ +M    I P       ++  L +  + + A+    +
Sbjct: 152 TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           MK  G   +    +  ++G+C    +D    LL   +  G  P + +Y+ +ID L +   
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA +   KM +  +  D V    ++ G  + GK ++AM +L       + P+ + +N+
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFN---LSPNIFVFNS 328

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
            I   C  G + +A  +  ++ +   +P+  ++T ++ G C+   + +A K   KM K G
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
             PSV  +  LID  CK G +E A  LF +M           +++G   V D  S  T++
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRM-----------ITEG--LVPDVVSYNTLM 435

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
             Y   G + KA+++L  +  +G  PD++TYN LI+G  K G +N A  +  EL  +G  
Sbjct: 436 NGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFS 495

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD VT+  +I G       E+AF +F  M ++   P      +L+   CR R  + A  L
Sbjct: 496 PDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVL 555

Query: 589 WLQYL 593
           + + L
Sbjct: 556 FHKML 560



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 218/499 (43%), Gaps = 30/499 (6%)

Query: 213 LCQINRADEAYR-LFLKMKDSGCSPDFV--AYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           L   N  +E +  +FLK+ ++      +   Y  L+N + K      AL L+        
Sbjct: 123 LISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNI 182

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P +G  + L+  L  +++ + A+ + ++M  + +  +  +  + I G    G +    K
Sbjct: 183 FPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWK 242

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL +M+  GI PD   Y  +I   C + LL +A S+  ++ +     ++ + + ++ G C
Sbjct: 243 LLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYC 302

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLF 448
           + G  ++A  +   +E     P++ +FN+ I  LC  G + KA  +F  M E+G  P  F
Sbjct: 303 KVGKSEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCF 359

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                         S  TM+  YC    I  A K L ++ + G  P + TY  LI+  CK
Sbjct: 360 --------------SYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCK 405

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            GN+  A  LF+ +  +GL PD V+Y TL+NG  +    + AF +   M   G +P    
Sbjct: 406 PGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVT 465

Query: 569 YKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMD 627
           Y  L+    +R   + A  +  +  R     D  +  +I   F  KG  E A      + 
Sbjct: 466 YNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFL----LF 521

Query: 628 FKLNDFQLAPYTI----WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
           F +++  L P  +     L G C+   + EA  +F  +++            LIHG C  
Sbjct: 522 FYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSL 581

Query: 684 GYLDLAMDVFLYTLKNGFI 702
           G +D A  +    +++G +
Sbjct: 582 GNIDDACHLVSMMIEHGIM 600



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 19/237 (8%)

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
           H   S+ TM+    +  + HKA  +L+ L         I+YNS   G+  +      LK+
Sbjct: 95  HTVESVCTMIHILVSGNMNHKAMDLLLHL---------ISYNSGEEGWHNI-----FLKI 140

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
            +    +  R     YG L+N   + +  + A ++  +M      P   V  SL+     
Sbjct: 141 HETHTKR--RVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLE 198

Query: 579 RRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
             + +LA+  +L+ ++      + S+ S  I  +  +G ++   + L+EM +      + 
Sbjct: 199 SEQLNLAWD-FLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVV 257

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
            YTI +  LC+   +KEA +I   + +    +   S   ++ G CK G  + AMDV 
Sbjct: 258 AYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVL 314


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/635 (24%), Positives = 284/635 (44%), Gaps = 51/635 (8%)

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFS 172
           D E  L ++ +MK F    D +    +    F+++    A  V+ EM+++   P++   S
Sbjct: 205 DSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHS 264

Query: 173 LLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDS 232
             I GL + GK ++A  +L E+ +  +      + +V+ GLC+  R +E  +L       
Sbjct: 265 SFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQ 324

Query: 233 GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
           G +PD   Y+ L+  +CK+  + + L   ++    G        S L+    +     + 
Sbjct: 325 GLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQV 384

Query: 293 YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
             +++K  +  +  D VLY + +    + G + +A+KLL +M   G+ PD   Y  LIKG
Sbjct: 385 TEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKG 444

Query: 353 FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
           +C  G +  AR    E+ K +  P+  T+ IL  G+ + G+V +   L   ME  G  P+
Sbjct: 445 YCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPN 504

Query: 413 VGMFNALIDGLCKAGELEKANLLFYKME------------------IGKNPT-----LFL 449
              +  +IDG C+   L +A +LF  +E                  + K  T     LFL
Sbjct: 505 SLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFL 564

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
           R+++ G  V D+ S   ++   C  G    A  +   + E  ++PD+I+Y+ LI+ +C+ 
Sbjct: 565 RVAKQGKLV-DRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQT 623

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           G++  A   F ++  +GL  D + Y  L+NG  ++   ++A  +F QM   G  P    Y
Sbjct: 624 GDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAY 683

Query: 570 KSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFK 629
             L+    +           LQ       RD  S+      L + +    +  + EM+ +
Sbjct: 684 TVLLDGHLKED---------LQRRWQGISRDKRSL------LLRAKQNRLLSSMKEMEIE 728

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            +   +  YT+ + G C+   +++A  +F  +++        +   LI+G C +G +  A
Sbjct: 729 PD---VPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKA 785

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
            D+F   +  G  ++P V       L FS  N++V
Sbjct: 786 EDLFQEMVDKG--IKPDV-------LTFSVLNRRV 811



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 217/482 (45%), Gaps = 5/482 (1%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI  Y KVG+  K L+ +  M     + + +I + +L   F K      +  Y++  + +
Sbjct: 336 LIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQ-CFTKLGMASQVTEYFQKFRDS 394

Query: 164 CLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
            L  + V +++ ++   K G  + A+K+L EM   G+ P++  YT +I G C       A
Sbjct: 395 GLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNA 454

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
            + F +M  +   PD V YN L +G  K   V E   L+   E  G  P   +Y  +IDG
Sbjct: 455 RQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDG 514

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
             R     EA   +  + E+ I+   VLY  M+ G    G   +A  L   + ++G + D
Sbjct: 515 FCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVD 574

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
            +  + LI   C  G    A ++   + +++ +P+  +++ LI   C+ G + +A+  F+
Sbjct: 575 RFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFH 634

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL--FLRLSQGGNRVH 459
            M + G    V ++  L++G CK G +++A  LF +M  +G  P +  +  L  G  +  
Sbjct: 635 DMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKED 694

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
            +   Q +     +  L  K  ++L  + E    PD+  Y  LI+G CK   +  A  LF
Sbjct: 695 LQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLF 754

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+  KGL PD   Y  LING         A  +F +M   G  P    +  L     R 
Sbjct: 755 DEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVLNRRVLRN 814

Query: 580 RK 581
           R+
Sbjct: 815 RQ 816



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 197/432 (45%), Gaps = 31/432 (7%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           + R   + +   ++ + +  Y K+G+ ++A++  G+M      PD   Y  ++     K 
Sbjct: 390 KFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKG 449

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A   + EM+K N  P++VT+++L +GLSK G       ++  M  RG+ PN  TY 
Sbjct: 450 DIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYG 509

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
           +VI G C+ +   EA  LF  +++ G     V Y++++ G+      D A  L     K 
Sbjct: 510 VVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQ 569

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +    S S LI  L R      A      M E+   PD++ Y  +I    + G +++A
Sbjct: 570 GKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNA 629

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                DM +RG+  D   Y  L+ G+C +GL+ +A  L  ++      P+   +T+L+ G
Sbjct: 630 RLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDG 689

Query: 388 MCR-------NGMVDDAQ---------KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEK 431
             +        G+  D +         +L + M++    P V  +  LIDG CK+  LE+
Sbjct: 690 HLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQ 749

Query: 432 ANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAES 490
           A  LF +M + G  P              D  +   ++  YC+ G + KA  +  ++ + 
Sbjct: 750 ARGLFDEMLQKGLTP--------------DHYAYTALINGYCSQGEVAKAEDLFQEMVDK 795

Query: 491 GNLPDIITYNSL 502
           G  PD++T++ L
Sbjct: 796 GIKPDVLTFSVL 807



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/561 (22%), Positives = 248/561 (44%), Gaps = 53/561 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
            + ++ E+ +L  +P + T ++L+   ++S  +E+ +   DEM    +  +  +  I+  
Sbjct: 174 TIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITR 233

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            L Q  +AD+A++++++M + G  PD                                  
Sbjct: 234 SLFQEKKADKAFKVWVEMIEMGVKPD---------------------------------- 259

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
            +  +S  I GL    + D AYA  +++  EK++ + + + V++ GL +  ++++  KLL
Sbjct: 260 -VHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGLCKEMRLEEVEKLL 318

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +   +G+ PD Y Y+ LI+ +C +G L +       +       N H  + L+    + 
Sbjct: 319 ENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANCHIMSYLLQCFTKL 378

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLR 450
           GM     + F K   +G      ++N  +D  CK G +++A  LL   M +G +P     
Sbjct: 379 GMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGEMMTVGLSP----- 433

Query: 451 LSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG 510
                +R+H       +++ YC  G I  A +   ++ ++   PD++TYN L +G  K G
Sbjct: 434 -----DRIH----YTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRG 484

Query: 511 NINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYK 570
            +     L   ++ +GL+P+S+TYG +I+G  R D   +A  +F  + + G      +Y 
Sbjct: 485 LVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYS 544

Query: 571 SLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM-KSIEEFLQKGEVENAIQGLLEMDFK 629
           S++     +     A+ L+L+  +     D  S  K I +  + G  + A      M  K
Sbjct: 545 SMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEK 604

Query: 630 LNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
            +   L  Y+  +   CQ G ++ A   F  +V+    V       L++G CK G +  A
Sbjct: 605 NDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEA 664

Query: 690 MDVFLYTLKNGFILRPRVCNY 710
            ++F      G  ++P +  Y
Sbjct: 665 CELFAQMTSLG--IKPDIIAY 683



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 152/363 (41%), Gaps = 59/363 (16%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL--- 140
           Q  +E+   NV      + +L SG  K G   +  +  G M++   QP+   Y  V+   
Sbjct: 456 QAFEEMLKANVKPDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGF 515

Query: 141 ----NIAFRKQLFLL----------------------------ALAVYYEMVKLNCLPNI 168
               N++  + LF +                            A  ++  + K   L + 
Sbjct: 516 CRGDNLSEAEVLFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDR 575

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
            + S LI+ L + G ++ A  +   M ++  +P+  +Y+ +IS  CQ      A   F  
Sbjct: 576 FSCSKLISDLCRDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHD 635

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG------ 282
           M   G   D + Y  L+NG+CK+  + EA  L       G  P + +Y+ L+DG      
Sbjct: 636 MVQRGLPVDVIVYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDL 695

Query: 283 --------------LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                         L RAK+          M E +IEPDV  Y V+I G  ++  ++ A 
Sbjct: 696 QRRWQGISRDKRSLLLRAKQN----RLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQAR 751

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            L  +M ++G+ PD Y Y ALI G+C  G + +A  L  E+  +   P+  TF++L   +
Sbjct: 752 GLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVLNRRV 811

Query: 389 CRN 391
            RN
Sbjct: 812 LRN 814


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 278/604 (46%), Gaps = 31/604 (5%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKPN 77
           E  +  LL  L  + V +V+    + +V  +FF WA ++ R R       +++ +L K  
Sbjct: 162 EGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTK 221

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  ++   +    + F  ++  Y + G    AL+    M+    +P++ I N
Sbjct: 222 LCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICN 281

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             +++  R      AL     M  +  +PN+VT++ +I G     + E AI++L++M  +
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDE 256
           G LP+K +Y  ++  LC+  R  E   L  KM K+ G  PD V YN L++   K    DE
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401

Query: 257 ALALLRSFEKDGF-VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
           AL  L+  ++ GF + +LG YS ++  L +  R  EA     +M      PDVV Y  ++
Sbjct: 402 ALWFLKDAQEKGFRIDKLG-YSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVV 457

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR---SLQVEIWKR 372
            G    G+V  A KLL  M   G  P+T  Y AL+ G C  G   +AR   ++  E W  
Sbjct: 458 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 517

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN+ T+++++ G+ R G + +A  +  +M   G FP     N L+  LC+ G   +A
Sbjct: 518 ---PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 574

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                 ME   N    + +           +  T++  +C    +  A  +L  +     
Sbjct: 575 RKF---MEECLNKGCAINV----------VNFTTVIHGFCQNDELDAALSVLDDMYLINK 621

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             D+ TY +L++   K G I  A +L K++  KG+ P  VTY T+I+   ++ + +D   
Sbjct: 622 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVA 681

Query: 553 IFGQM-PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEF 610
           I  +M  +  C     +Y  ++   C   K   A +L  + LR  S  D ++  ++ E +
Sbjct: 682 ILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGY 738

Query: 611 LQKG 614
           L+KG
Sbjct: 739 LKKG 742



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/521 (23%), Positives = 228/521 (43%), Gaps = 62/521 (11%)

Query: 211 SGLCQINRADEAYRLFLKM-----KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           S +C + R+ +  R+ LK      +      D + Y ++L    K +    +  +L   +
Sbjct: 175 SQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMK 234

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G      ++S ++    RA +  +A      M    +EP++++    I     A +++
Sbjct: 235 RRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE 294

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++ L  M+  GIVP+   YN +I+G+CDL  +++A  L  ++  +  LP+  ++  ++
Sbjct: 295 KALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIM 354

Query: 386 CGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
             +C+   + + + L  KM K  G  P    +N LI  L K    ++A            
Sbjct: 355 GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEA------------ 402

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
              FL+ +Q      DK     +V   C  G + +A  ++ ++      PD++TY +++N
Sbjct: 403 -LWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCP---PDVVTYTAVVN 458

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
           GFC++G ++ A KL + +   G +P++V+Y  L+NG+ R  +  +A  +     ++  +P
Sbjct: 459 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 518

Query: 565 SPAVYKSLMTWSCRRRKFSLA------------------FSLWLQYL-RDISGRDDESMK 605
           +   Y  +M    R  K S A                   +L LQ L RD  GR  E+ K
Sbjct: 519 NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD--GRTHEARK 576

Query: 606 SIEEFLQKG-------------------EVENAIQGLLEMDFKLNDFQLAPYTIWLIGLC 646
            +EE L KG                   E++ A+  L +M        +  YT  +  L 
Sbjct: 577 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 636

Query: 647 QDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
           + G++ EA  +   ++      TP +   +IH  C+ G +D
Sbjct: 637 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 677



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 218/499 (43%), Gaps = 52/499 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKM 124
           +  I + ++ N  +   + L+ ++   V +V +V  +  +I GY  +   E+A+E    M
Sbjct: 281 NTTIDVFVRANRLEKALRFLERMQV--VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGK 183
               C PD   Y  ++    +++  +    +  +M K + L P+ VT++ LI+ L+K   
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398

Query: 184 TEVAIKMLDEMTQRGIL--------------------------------PNKFTYTIVIS 211
            + A+  L +  ++G                                  P+  TYT V++
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVN 458

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C++   D+A +L   M   G  P+ V+Y ALLNG C+  +  EA  ++   E+  + P
Sbjct: 459 GFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSP 518

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +YS ++ GL R  +  EA    R+M  +   P  V   ++++ L   G+  +A K +
Sbjct: 519 NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 578

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +   +G   +   +  +I GFC    LD A S+  +++  +   +  T+T L+  + + 
Sbjct: 579 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK 638

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G + +A +L  KM   G  P+   +  +I   C+ G+++    +  KM            
Sbjct: 639 GRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM------------ 686

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               +R   +     ++E+ C  G + +A  +L ++  + +  D  T  +L+ G+ K G 
Sbjct: 687 ---ISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 743

Query: 512 INGALKLFKELQLKGLRPD 530
              A K+   +  + L PD
Sbjct: 744 PLSAYKVACRMFNRNLIPD 762



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 160/376 (42%), Gaps = 18/376 (4%)

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   Y ++++      L   +R + V + +R        F+ ++    R G + DA K+ 
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD 460
             M++AG  P++ + N  ID   +A  LEKA     +M++ G  P +             
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV------------- 312

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M+  YC    + +A ++L  +   G LPD ++Y +++   CK   I     L K
Sbjct: 313 -VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371

Query: 521 EL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++ +  GL PD VTY TLI+ L + D  ++A        + G       Y +++   C+ 
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
            + S A  L  +   D           +  F + GEV+ A + L  M    +      YT
Sbjct: 432 GRMSEAKDLINEM--DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 489

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
             L G+C+ G+  EA  + ++  E        +   ++HGL + G L  A DV    +  
Sbjct: 490 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 549

Query: 700 GFILRPRVCNYLLRSL 715
           GF   P   N LL+SL
Sbjct: 550 GFFPGPVEINLLLQSL 565



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 136/339 (40%), Gaps = 37/339 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L++G  + G   +A E     +E    P+   Y+ +++   R+     A  V  EMV
Sbjct: 488 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 547

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
                P  V  +LL+  L + G+T  A K ++E   +G   N   +T VI G CQ +  D
Sbjct: 548 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 607

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  +   M       D   Y  L++   K  R+ EA  L+                   
Sbjct: 608 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM------------------- 648

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
                           +KM  + I+P  V Y  +I    + GKV D + +L  M  R   
Sbjct: 649 ----------------KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 692

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
                YN +I+  C LG L++A +L  ++ +  S  +  T   L+ G  + G+   A K+
Sbjct: 693 --RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKV 750

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
             +M      P V M   L   L   G++++A+ L  ++
Sbjct: 751 ACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRL 789


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 282/601 (46%), Gaps = 39/601 (6%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM-VKLNCLPNIVTFSLL 174
           +ALE F +  E   +PD  +Y+  +    +     +A ++  EM  K  C+P+  T++ +
Sbjct: 250 EALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSV 309

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I    K G  E AI+  DEM   GI  N    T +I+G C+ N    A  LF KM++ G 
Sbjct: 310 ILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGP 369

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           SP+ V ++ L+  F K   +++AL   +  E  G  P +     +I G  + ++++EA  
Sbjct: 370 SPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALK 429

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + + FE  +  +V +   ++  L + GK+  A +LL  M  RGI P+   YN ++   C
Sbjct: 430 LFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHC 488

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
               +D AR++   + ++   PN +T++ILI G  +N    +  ++ N+M  +    +  
Sbjct: 489 RKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGV 548

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK------ASLQTMV 468
           ++  +I+GLCK G+  KA  L                    N + +K       S  +++
Sbjct: 549 VYQTIINGLCKVGQTSKARELL------------------ANMIEEKRFCVSCMSYNSII 590

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +   G +  A     ++  +G  P++ITY SL++G CK   ++ AL++  E++ KG++
Sbjct: 591 DGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVK 650

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
            D   YG LI+G  +    E A  +F ++ + G  PS  VY SL++          A  L
Sbjct: 651 LDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDL 710

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP----YTIWLI 643
           + + L+D    D  +  + I+  L++G +  A     EM        L P    YT+ + 
Sbjct: 711 YKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQA----VGLVPDEIMYTVIVN 766

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           GL + GQ  + + +F  +   K  VTP   +   +I G  + G LD A  +    L  G 
Sbjct: 767 GLSKKGQFVKVVKMFEEMK--KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 824

Query: 702 I 702
           +
Sbjct: 825 L 825



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 244/518 (47%), Gaps = 28/518 (5%)

Query: 81  LYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL 140
           + W+  DE+ S  +S+       LI+G+ K  D   AL+ F KM+     P+   ++ ++
Sbjct: 323 IRWK--DEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI 380

Query: 141 NIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGIL 200
               +      AL  Y +M  L   P++     +I G  K  K E A+K+ DE  + G L
Sbjct: 381 ERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-L 439

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
            N F    ++S LC+  + D+A  L  KM+  G  P+ V+YN ++   C+ + +D A  +
Sbjct: 440 ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTV 499

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
             +  + G  P   +YS LIDG F+            +M    IE + V+Y  +I GL +
Sbjct: 500 FSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCK 559

Query: 321 AGKVKDAMKLLSDM-RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
            G+   A +LL++M  E+        YN++I GF   G +D A +   E+      PN  
Sbjct: 560 VGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVI 619

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+T L+ G+C+N  +D A ++ ++M+  G    +  + ALI G CK   +E A+ LF ++
Sbjct: 620 TYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSEL 679

Query: 440 -EIGKNPT----------------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
            E G NP+                      L+ ++ + G R  D  +  T+++     G 
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRC-DLGTYTTLIDGLLKEGN 738

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           +  A  +  ++   G +PD I Y  ++NG  K G     +K+F+E++   + P+ + Y  
Sbjct: 739 LILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 798

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           +I G  R    ++AFR+  +M   G  P  A +  L++
Sbjct: 799 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 836



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 249/554 (44%), Gaps = 61/554 (11%)

Query: 30  SKTTVTSVIM---KTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN----GFDLY 82
           S+ T TSVI+   K  N +   R+           +  + +++I+   K N      DL+
Sbjct: 302 SQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLF 361

Query: 83  WQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNI 142
           ++  +E  S N    S  F VLI  + K G+ EKALE + KM+     P V+  + ++  
Sbjct: 362 YKMENEGPSPN----SVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQG 417

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             + Q    AL ++ E  +   L N+   + +++ L K GK + A ++L +M  RGI PN
Sbjct: 418 WLKGQKHEEALKLFDESFETG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPN 476

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDF------------------------ 238
             +Y  V+   C+    D A  +F  M + G  P+                         
Sbjct: 477 VVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVN 536

Query: 239 -----------VAYNALLNGFCKLRRVDEALALLRS-FEKDGFVPRLGSYSCLIDGLFRA 286
                      V Y  ++NG CK+ +  +A  LL +  E+  F     SY+ +IDG  + 
Sbjct: 537 QMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKE 596

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCY 346
              D A A Y +M    I P+V+ Y  ++ GL +  ++  A+++  +M+ +G+  D   Y
Sbjct: 597 GEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 656

Query: 347 NALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEK 406
            ALI GFC    ++ A +L  E+ +    P+   +  LI G    G +  A  L+ KM K
Sbjct: 657 GALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLK 716

Query: 407 AGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQT 466
            G    +G +  LIDGL K G L  A+ L+ +M             Q    V D+     
Sbjct: 717 DGLRCDLGTYTTLIDGLLKEGNLILASDLYTEM-------------QAVGLVPDEIMYTV 763

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +V      G   K  K+  ++ ++   P+++ YN++I G  + GN++ A +L  E+  KG
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 527 LRPDSVTYGTLING 540
           + PD  T+  L++G
Sbjct: 824 ILPDGATFDILVSG 837



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/572 (25%), Positives = 255/572 (44%), Gaps = 63/572 (11%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           N   F+ L+N  SK  +T+ A+ ++++M + G++P        +S L Q N   EA  L+
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 227 LKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRA 286
            +M   G   D        NG  +L                           L+    R 
Sbjct: 221 SRMVAIGVDGD--------NGTTQL---------------------------LMRASLRE 245

Query: 287 KRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI-VPDTYC 345
           ++  EA   + +  E   EPD +LY + ++   +   +  A  LL +M+E+ + VP    
Sbjct: 246 EKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQET 305

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y ++I      G ++ A   + E+       N    T LI G C+N  +  A  LF KME
Sbjct: 306 YTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKME 365

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLF--LRLSQG---GNRVH 459
             G  P+   F+ LI+   K GE+EKA   + KME +G  P++F    + QG   G +  
Sbjct: 366 NEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHE 425

Query: 460 DKASL---------------QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
           +   L                T++   C  G I KA ++L ++   G  P++++YN+++ 
Sbjct: 426 EALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVML 485

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             C+  N++ A  +F  +  KGL+P++ TY  LI+G  +   E++   +  QM  +    
Sbjct: 486 AHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEV 545

Query: 565 SPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD----ISGRDDESMKSIEEFLQKGEVENAI 620
           +  VY++++   C+  + S A  L    + +    +S     S+  I+ F+++GE++ A+
Sbjct: 546 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSI--IDGFIKEGEMDYAV 603

Query: 621 QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGL 680
               EM        +  YT  + GLC++ ++ +AL +   +      +  P+   LIHG 
Sbjct: 604 AAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGF 663

Query: 681 CKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           CK+  ++ A  +F   L+ G      V N L+
Sbjct: 664 CKKSNMESASALFSELLEEGLNPSQPVYNSLI 695


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 238/530 (44%), Gaps = 13/530 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  DE+++         F  L+  Y K    E+A+    KM+   C P V  YN++++  
Sbjct: 277 QMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAY 336

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +  L   AL +  EM      P++VT++ LI+GL + GK + A+    EM + G  PN 
Sbjct: 337 VKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNL 396

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY  +I       +  E   +F  ++ +G  PD V +N LL  F +     E   + + 
Sbjct: 397 CTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKE 456

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
            +K G++P   +Y  LI    R   +D+A   Y++M E  I PD+  Y  ++  L+  G+
Sbjct: 457 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 516

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
              A KL ++M +R   PD   Y++L+  + +   LD+ ++L  +I+ +   P+      
Sbjct: 517 WVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKT 576

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+    +   + + +K F ++ +  C   + + NA++              ++ K ++ K
Sbjct: 577 LVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVS-------------IYGKNKMVK 623

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                L L +  +  H  A+  +++  Y   G   K   IL ++  SG  PD  +YN++I
Sbjct: 624 KVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVI 683

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
             + + G +  A +LF E++  G++PD VTY   I         E+A  +   +   GC 
Sbjct: 684 YAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCK 743

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQK 613
           P+   Y S++   CR  +   A S      +   G   E    + E L K
Sbjct: 744 PNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGISKEEKHRLLELLAK 793



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/596 (23%), Positives = 264/596 (44%), Gaps = 25/596 (4%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           +  +  L+S + + G    A+  F +M +   QP +  YN VL++  +  +    + V  
Sbjct: 185 ASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLV 244

Query: 158 EMVKLNCLP-NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           + +K + +  +  T++ LI+   + G    A +M DEM   G  P+K T+  ++    + 
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKA 304

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            R +EA  +  KM+++GC+P  V YN+L++ + K   ++EAL L +  E  G  P + +Y
Sbjct: 305 RRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 364

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + LI GL R  + D A A Y +M      P++  Y  +I+     GK  + M +  D+R 
Sbjct: 365 TTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRS 424

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G VPD   +N L+  F   GL  +   +  E+ K   +P   T+  LI    R G+ D 
Sbjct: 425 AGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQ 484

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGN 456
           A +++ +M +AG +P +  +NA++  L + G   +A  LF +ME               +
Sbjct: 485 AMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME-------------DRD 531

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC----KVGNI 512
              D+ S  +++  Y  A  + K    +  L+E      I  +N L+        KV ++
Sbjct: 532 CKPDELSYSSLLHAYANAKKLDK----MKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSL 587

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           +   K F+EL+ +    D      +++   +    +    +   M +N    S A Y SL
Sbjct: 588 SETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSL 647

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKL 630
           M    R        ++ L  ++    R D    +  I  + +KG+++ A +   EM    
Sbjct: 648 MHMYSRLGDCEKCEAI-LTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 706

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYL 686
               +  Y I++     +   +EA+++   LV         +   ++ G C+ G +
Sbjct: 707 VKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRM 762



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 181/374 (48%), Gaps = 14/374 (3%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRV-DEALA 259
           P+   YT ++S   +  R  +A  +F +M D G  P  V YN +L+ + K+     E + 
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L+ S ++DG      +Y+ LI    R   Y EA   + +M     EPD V +  ++    
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +A + ++A+ +L  M   G  P    YN+LI  +   GLL++A  L+ E+  R   P+  
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           T+T LI G+ R G +D A   +++M + GC P++  +NALI      G+  +  ++F  +
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
                        +    V D  +  T++  +   GL  +   +  ++ ++G +P+  TY
Sbjct: 423 -------------RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTY 469

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
            SLI+ + + G  + A++++K +   G+ PD  TY  +++ L R  R   A ++F +M  
Sbjct: 470 VSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMED 529

Query: 560 NGCTPSPAVYKSLM 573
             C P    Y SL+
Sbjct: 530 RDCKPDELSYSSLL 543



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 16/271 (5%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD   Y  ++   S AG+ +DA+ +   M + G+ P    YN ++  +  + +  +   +
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 366 QVEIWKRDSLP-NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
            V+  K D +  + +T+  LI    R G+  +A ++F++M+ AG  P    FN+L+D   
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 425 KAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KA   E+A  +  KME  G  P++               +  +++  Y   GL+ +A ++
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVV--------------TYNSLISAYVKDGLLEEALEL 348

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
             ++   G  PD++TY +LI+G  ++G I+ AL  + E+   G  P+  TY  LI     
Sbjct: 349 KQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGV 408

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
             +  +   +F  +   G  P    + +L+ 
Sbjct: 409 RGKFTEMMIVFDDLRSAGYVPDVVTWNTLLA 439



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 109/284 (38%), Gaps = 43/284 (15%)

Query: 494 PDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV--------------------- 532
           PD   Y +L++ F + G    A+ +F+ +   G++P  V                     
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 533 ---------------TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
                          TY TLI+  +R     +A ++F +M   G  P    + SL+    
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           + R+   A  +  +           +  S I  +++ G +E A++   EM+F+     + 
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 637 PYTIWLIGLCQDGQVKEALNIFSVLVE--CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFL 694
            YT  + GL + G++  AL  +S +V   C   +   + +  +HG+  RG     M VF 
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGV--RGKFTEMMIVFD 420

Query: 695 YTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY 738
                G++  P V  +     +F ++        +   MK  GY
Sbjct: 421 DLRSAGYV--PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 462


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 251/544 (46%), Gaps = 52/544 (9%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  +M     LP+  +++ ++  L  +        +F ++       D  A + ++N
Sbjct: 56  AFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTVVN 115

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI-E 305
             C + R D   ++L    K G      +++ LI GLF   +  +A   ++K+  E I E
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV-PDTYCYNALIKGFCDLGLLDQARS 364
           PD V+YG ++ GL + G  + A  LL  M E+GI  PDT  YN +I  FC  G+LD A S
Sbjct: 176 PDEVMYGTVMDGLCKKGHTQKAFDLLRLM-EQGITKPDTCIYNIVIDAFCKDGMLDGATS 234

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           L  E+ +++  P+  T+T LI G+ +    +  + LF +M     +P V  FN++IDGLC
Sbjct: 235 LLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLC 294

Query: 425 KAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           K G++E A  ++ Y +E G  P              ++ +   +++ YC  G + +A +I
Sbjct: 295 KEGKVEDAEEIMTYMIEKGVEP--------------NEITYNVVMDGYCLRGQMGRARRI 340

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
              + + G  PDII+Y +LING+ +   ++ A++LF+E+   GL+P  VT   L+ GL  
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           V R E A   F +M   G  P+   + +L+                              
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGG---------------------------- 432

Query: 604 MKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                 + + G VE A+    +++ +  D  +  YT  + GLC++G++ +A   F  L  
Sbjct: 433 ------YFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPL 486

Query: 664 CKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKK 723
                   +   +I G C+ G LD A D+      NG +   R  N ++R    S    +
Sbjct: 487 IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSE 546

Query: 724 VHAY 727
           + A+
Sbjct: 547 MKAF 550



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 235/474 (49%), Gaps = 28/474 (5%)

Query: 132 DVYIYNAVLN---IAFRKQLFLLALAVYYEMVKLNCLP-NIVTFSLLINGLSKSGKTEVA 187
           D +  + V+N   +  R  L    LA++++      +P N VTF+ LI GL    K + A
Sbjct: 106 DAFALSTVVNSCCLMHRTDLGFSVLAIHFK----KGIPYNEVTFTTLIRGLFAENKVKDA 161

Query: 188 IKMLDEMTQRGIL-PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           + +  ++ +  I  P++  Y  V+ GLC+     +A+ L   M+     PD   YN +++
Sbjct: 162 VHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVID 221

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            FCK   +D A +LL   ++    P + +Y+ LIDGL +  ++++    + +M    I P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYP 281

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV  +  +I GL + GKV+DA ++++ M E+G+ P+   YN ++ G+C  G + +AR + 
Sbjct: 282 DVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIF 341

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +  +   P+  ++T LI G      +D A +LF ++ + G  PS+   + L+ GL + 
Sbjct: 342 DSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEV 401

Query: 427 GELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G  E A + F +M+  G  P L+                 T++  Y   GL+ +A     
Sbjct: 402 GRTECAKIFFDEMQAAGHIPNLYTHC--------------TLLGGYFKNGLVEEAMSHFH 447

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           +L       +I  Y ++ING CK G ++ A   F++L L GL PD +TY  +I+G  +  
Sbjct: 448 KLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEG 507

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
             ++A  +  +M  NGC P    Y  ++    R  K S   +    +L++I+G+
Sbjct: 508 LLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKA----FLKEIAGK 557



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 227/442 (51%), Gaps = 16/442 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE 158
            F  LI G +     + A+  F K+ +E  C+PD  +Y  V++   +K     A  +   
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRL 203

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M +    P+   ++++I+   K G  + A  +L+EM Q+ I P+  TYT +I GL ++++
Sbjct: 204 MEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ 263

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
            ++   LFL+M      PD   +N++++G CK  +V++A  ++    + G  P   +Y+ 
Sbjct: 264 WEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNV 323

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           ++DG     +   A   +  M ++ IEPD++ Y  +I G  E  K+  AM+L  ++ + G
Sbjct: 324 VMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNG 383

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           + P     + L++G  ++G  + A+    E+     +PN +T   L+ G  +NG+V++A 
Sbjct: 384 LKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAM 443

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNR 457
             F+K+E+     ++ ++ A+I+GLCK G+L+KA+  F K+  IG +P            
Sbjct: 444 SHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHP------------ 491

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             D  +   M+  YC  GL+ +A  +L ++ ++G LPD  TYN ++ GF +   ++    
Sbjct: 492 --DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKA 549

Query: 518 LFKELQLKGLRPDSVTYGTLIN 539
             KE+  K    ++ T   L++
Sbjct: 550 FLKEIAGKSFSFEAATVELLMD 571



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 170/363 (46%), Gaps = 35/363 (9%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           VI    K    D     L+E++  N+      +  LI G  K+   EK    F +M   +
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN 278

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
             PDV  +N+V                                   I+GL K GK E A 
Sbjct: 279 IYPDVCTFNSV-----------------------------------IDGLCKEGKVEDAE 303

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           +++  M ++G+ PN+ TY +V+ G C   +   A R+F  M D G  PD ++Y AL+NG+
Sbjct: 304 EIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGY 363

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            + +++D+A+ L R   ++G  P + + S L+ GLF   R + A  ++ +M      P++
Sbjct: 364 VEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNL 423

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
             +  ++ G  + G V++AM     +  R    +   Y A+I G C  G LD+A +   +
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEK 483

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      P+  T+T +I G C+ G++D+A+ +  KME  GC P    +N ++ G  ++ +
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSK 543

Query: 429 LEK 431
           + +
Sbjct: 544 VSE 546



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 188/441 (42%), Gaps = 50/441 (11%)

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
           D+A++ +R+M   K  P  V +  +++ L         + +  ++ +  I  D +  + +
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG- 408
           +   C +   D   S+    +K+    N  TFT LI G+     V DA  LF K+ +   
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENI 173

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMV 468
           C P   M+  ++DGLCK G  +KA  L             LRL + G    D      ++
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDL-------------LRLMEQGITKPDTCIYNIVI 220

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
           + +C  G++  A  +L ++ +    PDIITY SLI+G  K+        LF E+    + 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           PD  T+ ++I+GL +  + EDA  I   M + G  P+   Y  +M   C R +   A  +
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 589 W------------LQYLRDISG-----RDDESMKSIEEFLQKGEVENAI------QGLLE 625
           +            + Y   I+G     + D++M+   E  Q G   + +      +GL E
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 626 M------DFKLNDFQLAPYTIWLIGLC-------QDGQVKEALNIFSVLVECKAIVTPPS 672
           +          ++ Q A +   L   C       ++G V+EA++ F  L   +       
Sbjct: 401 VGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQI 460

Query: 673 CVKLIHGLCKRGYLDLAMDVF 693
              +I+GLCK G LD A   F
Sbjct: 461 YTAVINGLCKNGKLDKAHATF 481



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 107/217 (49%)

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           S +A+I+  ++    D   Q   E+    +        VL+ G ++VG  E A   F +M
Sbjct: 355 SYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           +     P++Y +  +L   F+  L   A++ ++++ +     NI  ++ +INGL K+GK 
Sbjct: 415 QAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKL 474

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           + A    +++   G+ P+  TYT +ISG CQ    DEA  +  KM+D+GC PD   YN +
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVI 534

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           + GF +  +V E  A L+      F     +   L+D
Sbjct: 535 VRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMD 571


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 185/680 (27%), Positives = 307/680 (45%), Gaps = 48/680 (7%)

Query: 96  VVSDVFF--VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
           V  DVF   VLI  + KVG    A+     ++      D   YN V++      L   A 
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHGLADEAY 181

Query: 154 AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
               EMVK+  LP+ V+++ LI+G  K G    A  ++DE+++     N  T+TI++S  
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSY 237

Query: 214 CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             ++  +EAYR    M  SG  PD V +++++N  CK  +V E   LLR  E+    P  
Sbjct: 238 YNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294

Query: 274 GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
            +Y+ L+D LF+A  Y  A A Y +M    I  D+V+Y V++ GL +AG +++A K    
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           + E   VP+   Y AL+ G C  G L  A  +  ++ ++  +PN  T++ +I G  + GM
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL--- 449
           +++A  L  KME     P+   +  +IDGL KAG+ E A  L  +M  IG     ++   
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474

Query: 450 ---------RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK---------ILMQLAESG 491
                    R+ +    V D  S    ++Q     LI   +K            ++ E G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534

Query: 492 NLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
              D+++YN LI+G  K G + GA   +K ++ KG+ PD  T+  ++N  ++    E   
Sbjct: 535 MPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
           +++ +M   G  PS      ++   C   K   A  +  Q +      +  + +   +  
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653

Query: 612 QKGEVENAI----QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
            K +  +AI    + LL    KL+      Y   +  LC+ G  K+A  +   +     I
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSR---QVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNKKVH 725
               +   L+HG     ++  A+  +   ++ G  + P V  Y  ++R L  +   K+V 
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG--ISPNVATYNTIIRGLSDAGLIKEVD 768

Query: 726 AYHLLCRMKSVGYDLDACLY 745
            +  L  MKS G   D   Y
Sbjct: 769 KW--LSEMKSRGMRPDDFTY 786



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/583 (24%), Positives = 264/583 (45%), Gaps = 59/583 (10%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
           +M+E    P+   Y  +++  F+  ++  ALA+Y +MV      ++V +++L++GL K+G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
               A K    + +   +PN  TYT ++ GLC+      A  +  +M +    P+ V Y+
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +++NG+ K   ++EA++LLR  E    VP   +Y  +IDGLF+A + + A    ++M   
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM---------------------------- 334
            +E +  +   ++  L   G++K+   L+ DM                            
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523

Query: 335 -------RERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
                  +ERG+  D   YN LI G    G +    + +  + ++   P+  TF I++  
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK-GMREKGIEPDIATFNIMMNS 582

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM---EIGKN 444
             + G  +   KL++KM+  G  PS+   N ++  LC+ G++E+A  +  +M   EI  N
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642

Query: 445 PT---LFLRLSQGGNR------VHD-------KASLQ---TMVEQYCTAGLIHKAYKILM 485
            T   +FL  S    R       H+       K S Q   T++   C  G+  KA  ++ 
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 702

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +   G +PD +T+NSL++G+    ++  AL  +  +   G+ P+  TY T+I GL    
Sbjct: 703 DMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG 762

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD-ISGRDDESM 604
             ++  +   +M   G  P    Y +L++   +      + +++ + + D +  +     
Sbjct: 763 LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYN 822

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQ 647
             I EF   G++  A + L EM  +      + Y   + GLC+
Sbjct: 823 VLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 240/549 (43%), Gaps = 84/549 (15%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           V+ VL+ G +K GD  +A ++F  + E +  P+V  Y A+++   +      A  +  +M
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ + +PN+VT+S +ING  K G  E A+ +L +M  + ++PN FTY  VI GL +  + 
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           + A  L  +M+  G   +    +AL+N   ++ R+ E   L++     G      +Y+ L
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510

Query: 280 IDGLFRA-----------KRYDEAYAW-----------------------YRKMFEEKIE 305
           ID  F+            +  +    W                       Y+ M E+ IE
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIE 570

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD+  + +M+    + G  +  +KL   M+  GI P     N ++   C+ G +++A  +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630

Query: 366 QVEIWKRDSLPNTHTFTI-----------------------------------LICGMCR 390
             ++   +  PN  T+ I                                   LI  +C+
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690

Query: 391 NGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFL 449
            GM   A  +   ME  G  P    FN+L+ G      + KA +     ME G +P +  
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV-- 748

Query: 450 RLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKV 509
                       A+  T++     AGLI +  K L ++   G  PD  TYN+LI+G  K+
Sbjct: 749 ------------ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796

Query: 510 GNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVY 569
           GN+ G++ ++ E+   GL P + TY  LI+    V +   A  +  +M + G +P+ + Y
Sbjct: 797 GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856

Query: 570 KSLMTWSCR 578
            ++++  C+
Sbjct: 857 CTMISGLCK 865



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 188/406 (46%), Gaps = 57/406 (14%)

Query: 187 AIKMLDEMTQRGILP-----NKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           A + L  M   G++P     N   +   ++GL      D+   ++ KM   G SPD  A 
Sbjct: 77  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVH----DQVSLIYSKMIACGVSPDVFAL 132

Query: 242 NALLNGFCKLRRVDEALALLRS--FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
           N L++ FCK+ R+  A++LLR+     D       +Y+ +I GL      DEAY +  +M
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRVISIDTV-----TYNTVISGLCEHGLADEAYQFLSEM 187

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE----------------------- 336
            +  I PD V Y  +I G  + G    A  L+ ++ E                       
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247

Query: 337 -----RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                 G  PD   ++++I   C  G + +   L  E+ +    PN  T+T L+  + + 
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
            +   A  L+++M   G    + ++  L+DGL KAG+L +A   F             ++
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF-------------KM 354

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
               N+V +  +   +V+  C AG +  A  I+ Q+ E   +P+++TY+S+ING+ K G 
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           +  A+ L ++++ + + P+  TYGT+I+GL +  +EE A  +  +M
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 167/422 (39%), Gaps = 93/422 (22%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT------------------------ 343
           V L+  + R      ++  A + LS M   G+VPD+                        
Sbjct: 58  VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117

Query: 344 ------------YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
                       +  N LI  FC +G L  A SL   +  R    +T T+  +I G+C +
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEH 174

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G+ D+A +  ++M K G  P    +N LIDG CK G   +A              L   +
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAK------------ALVDEI 222

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+     H       ++  Y     I +AY+    +  SG  PD++T++S+IN  CK G 
Sbjct: 223 SELNLITH-----TILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGK 274

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +     L +E++   + P+ VTY TL++ L + +    A  ++ QM   G      VY  
Sbjct: 275 VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 334

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           LM    +                  +G   E+ K+ +  L+  +V N +           
Sbjct: 335 LMDGLFK------------------AGDLREAEKTFKMLLEDNQVPNVVT---------- 366

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 YT  + GLC+ G +  A  I + ++E   I    +   +I+G  K+G L+ A+ 
Sbjct: 367 ------YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420

Query: 692 VF 693
           + 
Sbjct: 421 LL 422



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 48/351 (13%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F ++++   K GD E  L+ + KMK    +P +   N V+ +         A+ +  +M+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
            +   PN+ T+ + ++  SK  + +   K  + +   GI  ++  Y  +I+ LC++    
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  +   M+  G  PD V +N+L++G+     V +AL+      + G  P + +Y+ +I
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM------------ 328
            GL  A    E   W  +M    + PD   Y  +I G ++ G +K +M            
Sbjct: 756 RGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815

Query: 329 -----------------------KLLSDMRERGIVPDTYCYNALIKGFCDL--------- 356
                                  +LL +M +RG+ P+T  Y  +I G C L         
Sbjct: 816 PKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWN 875

Query: 357 ---GLLDQARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
                L +A+ L  E + ++  +P   T   +     + GM  DA++   +
Sbjct: 876 KKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 245/543 (45%), Gaps = 57/543 (10%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           + +++  Y + GD   A ++F  M+    +P  ++Y+++++     +    AL    +M 
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +      IVT+S+++ G +K G  + A    +E  ++    N   Y  +I   CQI   D
Sbjct: 347 EEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMD 406

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M++ G       Y+ +++G+  +   ++ L +    ++ GF P + SY CLI
Sbjct: 407 RAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLI 466

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    + M    I+ ++  Y ++I G  +     +A  +  D  + G+ 
Sbjct: 467 NLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLK 526

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I  FC +G +D+A  +  ++ K    P T TF  +I G  R G +  A ++
Sbjct: 527 PDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEI 586

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGNR 457
           F+ M ++GC P+V  +NALI GL +  ++ KA  +  +M    +G N   +  L QG   
Sbjct: 587 FDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYAS 646

Query: 458 VHDKA-------------------SLQTMVEQYCTAGLIHKA------------------ 480
           + D                     + + +++  C +G +  A                  
Sbjct: 647 LGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFV 706

Query: 481 YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
           Y IL+                 Q+ + G LPDI TY S IN  CK G++  A ++ +E++
Sbjct: 707 YNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEME 766

Query: 524 LKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
             G++P+  TY TLING  R    E A   F +M   G  P  AVY  L+T    R  F+
Sbjct: 767 ASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFA 826

Query: 584 LAF 586
            ++
Sbjct: 827 QSY 829



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 198/454 (43%), Gaps = 48/454 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +    D++  ++ GY  +G+ EK L  F ++KE    P V  Y  ++N+  +  
Sbjct: 414 EMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVG 473

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL +   M       N+ T+S+LING  K      A  + ++ T+ G+ P+   Y 
Sbjct: 474 KVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYN 533

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I+  C +   D A  +  +M+     P    +  +++GF +   +  AL +     + 
Sbjct: 534 NIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRS 593

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +Y+ LI GL   ++  +A A   +M    + P+   Y  +++G +  G  + A
Sbjct: 594 GCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKA 653

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + +R  G+  D Y Y AL+K  C  G +  A ++  E+  ++   NT  + ILI G
Sbjct: 654 FQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDG 713

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             R G V +A  L  +M K G  P +  + + I+  CKAG+++KA  +  +ME       
Sbjct: 714 WARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEA------ 767

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                                     SG  P++ TY +LING+ 
Sbjct: 768 ------------------------------------------SGIKPNLKTYTTLINGWA 785

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           +      AL  F+E++L G +PD   Y  L+  L
Sbjct: 786 RASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSL 819



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/479 (22%), Positives = 209/479 (43%), Gaps = 22/479 (4%)

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P    Y  ++  + +   +  A     S    G  P    YS LI      +  +EA   
Sbjct: 282 PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHC 341

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            RKM EE IE  +V Y +++ G ++ G    A     + +E+    +   Y  +I   C 
Sbjct: 342 VRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQ 401

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           +  +D+A +L  E+ ++        +  ++ G    G  +    +F+++++ G FPSV  
Sbjct: 402 ICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVIS 461

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +  LI+   K G++ KA      +EI K     +++S      H+  +   ++  +    
Sbjct: 462 YGCLINLYTKVGKVSKA------LEISK----MMKMS---GIKHNMKTYSMLINGFLKLK 508

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
               A+ +     + G  PD++ YN++I  FC +GN++ A+ + +++Q +  RP + T+ 
Sbjct: 509 DWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFL 568

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            +I+G  R      A  IF  M ++GC P+   Y +L+     +R+ + A ++  +    
Sbjct: 569 PIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVA 628

Query: 596 ISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
             G ++ +  ++ + +   G+ E A Q    +  +  +  +  Y   L   C+ G+++ A
Sbjct: 629 GVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSA 688

Query: 655 LNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           L   +V  E  A   P +      LI G  +RG +  A D+     K G +  P +  Y
Sbjct: 689 L---AVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLL--PDIHTY 742



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 9/270 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LDE+    V      +  L+ GY  +GD EKA + F  ++    + DVY Y A+L    +
Sbjct: 622 LDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCK 681

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
                 ALAV  EM   N   N   +++LI+G ++ G    A  ++ +M + G+LP+  T
Sbjct: 682 SGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHT 741

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           YT  I+  C+     +A  +  +M+ SG  P+   Y  L+NG+ +    ++AL+     +
Sbjct: 742 YTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMK 801

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY------RKMFEEKIEPDVVLYGVMIRGLS 319
             GF P    Y CL+  L     + ++Y +       R+M E ++   +V  G  +    
Sbjct: 802 LAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEM---IVDMGTAVHWSR 858

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
              K++     L++  ++   PD   +N L
Sbjct: 859 CLRKIERTGGELTEALQKTFPPDWTSHNVL 888


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 209/425 (49%), Gaps = 15/425 (3%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++VT+ +LI+G    G+ E A+K+LD+M  RG+ PN   YT V++ LC   R  +A  +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M       D   Y  +L+GFC    +  A       ++ G      +Y+ LI+GL R
Sbjct: 352 VEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCR 411

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A    EA    ++M   +++ D V Y V++ G  + GK+ +A ++ + M +RG+ P+   
Sbjct: 412 AGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVT 471

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y AL  G C  G +  A  L  E+  +    N  T+  LI G+C+ G +D A +    M+
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
            AG  P V  +  LID LCK+GEL++A+ L  +M + G  PT+               + 
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIV--------------TY 577

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  +C +G +    K+L  + E    P+  TYNSL+  +C   N+    +++K +  
Sbjct: 578 NVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCS 637

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           + + P+  TY  LI G  +    ++A     +M + G   + + Y +L+    +++KF  
Sbjct: 638 RNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVE 697

Query: 585 AFSLW 589
           A  L+
Sbjct: 698 ARKLF 702



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 233/524 (44%), Gaps = 53/524 (10%)

Query: 200 LPNK--FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           LP+K   +Y I++  LC   R ++A +LF +M      PD V Y  L++G+C L  ++ A
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENA 313

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + LL      G  P    Y+ ++  L    R  +A      M   K+  D  +Y  ++ G
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
               G +  A +   +M+ +G+  D   Y  LI G C  G L +A  +  E+  R    +
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+T+L+ G C+ G + +A ++ N M + G  P+V  + AL DGLCK G+++ AN L +
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +M    N  L L          +  +  +++   C AG + +A + +  +  +G  PD+ 
Sbjct: 494 EM---SNKGLEL----------NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
           TY +LI+  CK G ++ A  L +E+   G++P  VTY  L+NG     R E   ++   M
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVE 617
            +    P+   Y SLM   C                         +MKS  E        
Sbjct: 601 LEKNIHPNATTYNSLMKQYCI----------------------GNNMKSTTEIY------ 632

Query: 618 NAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLI 677
              +G+   + + N+     Y I + G C+   +KEA    + ++E    +T  S   LI
Sbjct: 633 ---KGMCSRNVEPNE---NTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686

Query: 678 HGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
             L K+     A  +F    K GF   P V N+ +    F++DN
Sbjct: 687 RLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI-DFNFNEDN 729



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 214/486 (44%), Gaps = 51/486 (10%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           Q  DE+ S    V    + +LI GY  +G+ E A++    M     +P+  +Y +V+ + 
Sbjct: 283 QLFDEMASPPDVVT---YGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALL 339

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             K     AL V  +MV    + +   ++ +++G    G    A +  DEM ++G+  + 
Sbjct: 340 CDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDG 399

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT +I+GLC+     EA ++  +M       D V Y  L++G+CK  ++ EA  +  +
Sbjct: 400 VTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNT 459

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
             + G  P + +Y+ L DGL +      A     +M  + +E +   Y  +I GL +AG 
Sbjct: 460 MVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY 519

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           +  AM+ ++DM   G+ PD Y Y  LI   C  G LD+A  L  E+      P   T+ +
Sbjct: 520 LDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNV 579

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+ G C +G V+  +KL   M +    P+   +N+L+   C                IG 
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC----------------IGN 623

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           N                   +++  E Y   G+  +  +           P+  TYN LI
Sbjct: 624 N-------------------MKSTTEIY--KGMCSRNVE-----------PNENTYNILI 651

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
            G CK  ++  A     E+  KG R  + +Y  LI  L +  +  +A ++F  M + G T
Sbjct: 652 KGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFT 711

Query: 564 PSPAVY 569
             P VY
Sbjct: 712 AEPDVY 717



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 8/256 (3%)

Query: 493 LPD--IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDA 550
           LPD  + +YN L+   C  G +  A +LF E+      PD VTYG LI+G   +   E+A
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENA 313

Query: 551 FRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EE 609
            ++   M   G  P+  VY S++   C + + S A ++    +      D+    ++   
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVT 669
           F  KG++ +A +   EM  K        YT  + GLC+ G++KEA  +   ++  +  V 
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 670 PPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHL 729
             +   L+ G CKRG +  A  V    ++ G  + P V  Y   S    K      A  L
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG--VAPNVVTYTALSDGLCKQGDVQAANEL 491

Query: 730 LCRMKSVGYDLDACLY 745
           L  M + G +L+AC Y
Sbjct: 492 LHEMSNKGLELNACTY 507


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 168/707 (23%), Positives = 306/707 (43%), Gaps = 21/707 (2%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSGNVSVVSDVF 101
           +P+     F+  A++ R+     +   +  L++ +G      Q  D ++   +      F
Sbjct: 80  DPEEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTF 139

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
             +       G    A  +   MKE     + Y YN ++    +      A+ VY  M  
Sbjct: 140 CTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA 199

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              +P + T+S+L+    K    E  + +L EM  RG+ PN ++YTI I  L Q  R +E
Sbjct: 200 DGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEE 259

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           AYR+  KM++ GC PD V    L+   C   R+ +A  +    +     P   +Y  L+D
Sbjct: 260 AYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
               +         +  +  +    +VV Y   +  L + G+V +A+ +  +M+++GI+P
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
             Y YN+LI GF      ++A  L   +      PN +T  + I    ++G    A K +
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHD 460
             M+  G  P V   NA++ GL K G L  A  +F++++ +G +P              D
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISP--------------D 485

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M++    A    +A KI  ++ E+   PD++  NSLI+   K G  N A K+F 
Sbjct: 486 NITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFY 545

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           EL+   L P   TY TL+ GL R  + ++  ++   M  N   P+   Y +++   C+  
Sbjct: 546 ELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNG 605

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLNDFQLAPYT 639
           + + A  +      +    D  S  ++   L K + ++ A     +M  K+     A   
Sbjct: 606 EVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVC 664

Query: 640 IWLIGLCQDGQVKEALN-IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLK 698
             L    + G +KEAL+ +   +++  + V   S   L+ G+ KR   + +++       
Sbjct: 665 TILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIAS 724

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +G +L     + ++R L   K  + + A+ L+ + +++G  L    Y
Sbjct: 725 SGLLLDDLFLSPIIRHL--CKHKEALAAHELVKKFENLGVSLKTGSY 769



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 162/636 (25%), Positives = 289/636 (45%), Gaps = 66/636 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF-RKQLFLLALAVYYE 158
           ++F++ SG+ +     +A++ +  M      P V  Y +VL +AF +++     + +  E
Sbjct: 178 IYFLVKSGFDR-----EAMDVYKAMAADGVVPTVRTY-SVLMLAFGKRRDAETVVGLLGE 231

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M      PN+ ++++ I  L ++G+ E A ++L +M + G  P+  T T++I  LC   R
Sbjct: 232 MEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGR 291

Query: 219 ADEAYRLFLKMKDSGCSPD-----------------------------------FVAYNA 243
             +A  +F KMK S   PD                                    V+Y A
Sbjct: 292 LADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTA 351

Query: 244 LLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEK 303
            ++  C++ RVDEAL +    ++ G +P+  SY+ LI G  +A R++ A   +  M    
Sbjct: 352 AVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG 411

Query: 304 IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQAR 363
             P+   + + I    ++G+   A+K    M+ +GIVPD    NA++ G    G L  A+
Sbjct: 412 PTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAK 471

Query: 364 SLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            +  E+      P+  T+T++I    +    D+A K+F +M +  C P V   N+LID L
Sbjct: 472 RVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDML 531

Query: 424 CKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYK 482
            KAG   +A  +FY++ E+   PT                +  T++      G + +  +
Sbjct: 532 YKAGRGNEAWKIFYELKEMNLEPT--------------DCTYNTLLAGLGREGKVKEVMQ 577

Query: 483 ILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ 542
           +L  +  +   P+IITYN++++  CK G +N AL +   + + G  PD  +Y T++ GL 
Sbjct: 578 LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLV 637

Query: 543 RVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDD 601
           + DR ++AF +F QM +    P  A   +++    R      A     +Y L+  S  D 
Sbjct: 638 KEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDR 696

Query: 602 ESMKSI-EEFLQKGEVENAI---QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
            S+ S+ E  L++   E +I   + +      L+D  L+P    +  LC+  +   A  +
Sbjct: 697 SSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSP---IIRHLCKHKEALAAHEL 753

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                     +   S   LI GL     +D+A ++F
Sbjct: 754 VKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 276/609 (45%), Gaps = 79/609 (12%)

Query: 65   SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
            + +AV+  L K     +  +   EL++  +S  +  + ++I    K  + ++A++ F +M
Sbjct: 453  AGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEM 512

Query: 125  KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN-----CL-------------- 165
             E  C PDV   N+++++ ++      A  ++YE+ ++N     C               
Sbjct: 513  IENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKV 572

Query: 166  ----------------PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
                            PNI+T++ +++ L K+G+   A+ ML  MT  G +P+  +Y  V
Sbjct: 573  KEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTV 632

Query: 210  ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF--EKD 267
            + GL + +R DEA+ +F +MK    +PD+     +L  F +   + EAL  +R +  + D
Sbjct: 633  MYGLVKEDRLDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPD 691

Query: 268  GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
              V R   +S L++G+ +    +++  +   +    +  D +    +IR L +  +   A
Sbjct: 692  SKVDRSSVHS-LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAA 750

Query: 328  MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
             +L+      G+   T  YNALI G  D  L+D A  L  E+ +    P+  T+ +++  
Sbjct: 751  HELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810

Query: 388  MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT 446
            M ++  ++D  K+  +M   G   +   +N +I GL K+  L++A  L+Y+ M  G +PT
Sbjct: 811  MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870

Query: 447  ------LFLRLSQGGNRVHDKASLQTMVEQYCT---------------AGLIHKAYKILM 485
                  L   L + GN    +A    M+E  C                AG   K  ++  
Sbjct: 871  PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFE 930

Query: 486  QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
             + E G  PDI +Y  +I+  C  G +N  L  FK+L   GL PD +TY  LI+GL +  
Sbjct: 931  SMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSG 990

Query: 546  REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
            R E+A  ++  M + G  P+   Y SL+ +  +                  +G+  E+ K
Sbjct: 991  RLEEALSLYNDMEKKGIAPNLYTYNSLILYLGK------------------AGKAAEAGK 1032

Query: 606  SIEEFLQKG 614
              EE L KG
Sbjct: 1033 MYEELLAKG 1041



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 175/739 (23%), Positives = 304/739 (41%), Gaps = 127/739 (17%)

Query: 62   SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
            +  S +A +  L +    D      DE++   +      +  LISG+ K     +ALE F
Sbjct: 345  NVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELF 404

Query: 122  GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
              M      P+ Y +   +N   +    L AL  Y  M     +P++V  + ++ GL+K+
Sbjct: 405  NHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKT 464

Query: 182  GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
            G+  +A ++  E+   GI P+  TYT++I    + + ADEA ++F +M ++ C+PD +A 
Sbjct: 465  GRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAM 524

Query: 242  NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
            N+L++   K  R +EA  +    ++    P   +Y+ L+ GL R  +  E       M  
Sbjct: 525  NSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNS 584

Query: 302  EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG--------- 352
                P+++ Y  ++  L + G+V  A+ +L  M   G +PD   YN ++ G         
Sbjct: 585  NSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDE 644

Query: 353  ----FCDL---------------------GLLDQA--------------------RSLQV 367
                FC +                     GL+ +A                     SL  
Sbjct: 645  AFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLME 704

Query: 368  EIWKRDSLPNTHTF----------------TILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             I KRD    +  F                + +I  +C++     A +L  K E  G   
Sbjct: 705  GILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSL 764

Query: 412  SVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
              G +NALI GL     ++ A  LF +M+ +G +P              D+ +   +++ 
Sbjct: 765  KTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDP--------------DEFTYHLILDA 810

Query: 471  YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
               +  I    KI  ++   G     +TYN++I+G  K   ++ A+ L+ +L  +G  P 
Sbjct: 811  MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870

Query: 531  SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
              TYG L++GL +    EDA  +F +M + GC P+ A+Y  L+                 
Sbjct: 871  PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG--------------- 915

Query: 591  QYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQ 650
                 I+G  ++  +  E  +++G         +  D K        YT+ +  LC DG+
Sbjct: 916  ---YRIAGDTEKVCELFESMVEQG---------MNPDIK-------SYTVVIDTLCADGR 956

Query: 651  VKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRV 707
            + + L+ F  L +   +   P  +    LIHGL K G L+ A+ ++    K G  + P +
Sbjct: 957  LNDGLSYFKQLTD---MGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG--IAPNL 1011

Query: 708  CNYLLRSLLFSKDNKKVHA 726
              Y    L   K  K   A
Sbjct: 1012 YTYNSLILYLGKAGKAAEA 1030



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 259/581 (44%), Gaps = 50/581 (8%)

Query: 29   LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            ++ T +     K  N     + F    + +      + +++I ML K    +  W+   E
Sbjct: 487  ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546

Query: 89   LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
            L+  N+      +  L++G  + G  ++ ++    M      P++  YN VL+   +   
Sbjct: 547  LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606

Query: 149  FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM---------TQRGI 199
               AL + Y M    C+P++ +++ ++ GL K  + + A  M  +M         T   I
Sbjct: 607  VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTI 666

Query: 200  LP--------------------------NKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
            LP                          ++ +   ++ G+ + +  +++      +  SG
Sbjct: 667  LPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSG 726

Query: 234  CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
               D +  + ++   CK +    A  L++ FE  G   + GSY+ LI GL      D A 
Sbjct: 727  LLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAE 786

Query: 294  AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
              + +M     +PD   Y +++  + ++ +++D +K+  +M  +G       YN +I G 
Sbjct: 787  ELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGL 846

Query: 354  CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
                +LD+A +L  ++      P   T+  L+ G+ ++G ++DA+ LF++M + GC P+ 
Sbjct: 847  VKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNC 906

Query: 414  GMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYC 472
             ++N L++G   AG+ EK   LF  M E G NP              D  S   +++  C
Sbjct: 907  AIYNILLNGYRIAGDTEKVCELFESMVEQGMNP--------------DIKSYTVVIDTLC 952

Query: 473  TAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSV 532
              G ++       QL + G  PD+ITYN LI+G  K G +  AL L+ +++ KG+ P+  
Sbjct: 953  ADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLY 1012

Query: 533  TYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            TY +LI  L +  +  +A +++ ++   G  P+   Y +L+
Sbjct: 1013 TYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 1053



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 164/326 (50%)

Query: 94   VSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLAL 153
            VS+ +  +  LI G       + A E F +MK   C PD + Y+ +L+   +       L
Sbjct: 762  VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821

Query: 154  AVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGL 213
             +  EM         VT++ +I+GL KS   + AI +  ++   G  P   TY  ++ GL
Sbjct: 822  KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881

Query: 214  CQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRL 273
             +    ++A  LF +M + GC P+   YN LLNG+      ++   L  S  + G  P +
Sbjct: 882  LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941

Query: 274  GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
             SY+ +ID L    R ++  ++++++ +  +EPD++ Y ++I GL ++G++++A+ L +D
Sbjct: 942  KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001

Query: 334  MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
            M ++GI P+ Y YN+LI      G   +A  +  E+  +   PN  T+  LI G   +G 
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGS 1061

Query: 394  VDDAQKLFNKMEKAGCFPSVGMFNAL 419
             ++A   + +M   GC P+   +  L
Sbjct: 1062 PENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 176/370 (47%), Gaps = 15/370 (4%)

Query: 171  FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
             S +I  L K  +   A +++ +    G+     +Y  +I GL   +  D A  LF +MK
Sbjct: 734  LSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMK 793

Query: 231  DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
              GC PD   Y+ +L+   K  R+++ L +       G+     +Y+ +I GL ++K  D
Sbjct: 794  RLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLD 853

Query: 291  EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            EA   Y ++  E   P    YG ++ GL + G ++DA  L  +M E G  P+   YN L+
Sbjct: 854  EAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913

Query: 351  KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             G+   G  ++   L   + ++   P+  ++T++I  +C +G ++D    F ++   G  
Sbjct: 914  NGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973

Query: 411  PSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P +  +N LI GL K+G LE+A  L+  ME  G  P L+              +  +++ 
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLY--------------TYNSLIL 1019

Query: 470  QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                AG   +A K+  +L   G  P++ TYN+LI G+   G+   A   +  + + G RP
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRP 1079

Query: 530  DSVTYGTLIN 539
            +S TY  L N
Sbjct: 1080 NSSTYMQLPN 1089



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 3/319 (0%)

Query: 136  YNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMT 195
            YNA++     + L  +A  ++ EM +L C P+  T+ L+++ + KS + E  +K+ +EM 
Sbjct: 769  YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828

Query: 196  QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
             +G      TY  +ISGL +    DEA  L+ ++   G SP    Y  LL+G  K   ++
Sbjct: 829  NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888

Query: 256  EALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMI 315
            +A AL     + G  P    Y+ L++G   A   ++    +  M E+ + PD+  Y V+I
Sbjct: 889  DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 948

Query: 316  RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
              L   G++ D +     + + G+ PD   YN LI G    G L++A SL  ++ K+   
Sbjct: 949  DTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 1008

Query: 376  PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
            PN +T+  LI  + + G   +A K++ ++   G  P+V  +NALI G   +G  E A   
Sbjct: 1009 PNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAA 1068

Query: 436  FYKMEIG---KNPTLFLRL 451
            + +M +G    N + +++L
Sbjct: 1069 YGRMIVGGCRPNSSTYMQL 1087


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 264/582 (45%), Gaps = 34/582 (5%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           AL V  +M  LN + +I T++ L+  L  S    +   + +E+   G   +++T +IV+ 
Sbjct: 198 ALFVLVKMKDLNFIVSIQTYNSLLYNLRHSN---IMWDVYNEIKVSGTPQSEYTSSIVVD 254

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           GLC+ +R  +A   F   +     P  V++N +++ +CKL  VD A +      K G +P
Sbjct: 255 GLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLP 314

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              SY+ LI GL  A    EA      M    +EPD+V Y ++ +G    G +  A  ++
Sbjct: 315 DAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNII 374

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
             M  +G  P+   Y  LI G C +G +++A  L  E+       +  + T+L+  +C++
Sbjct: 375 QKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKS 434

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM------------ 439
             VD A KLF +ME  G  P +  ++ LI GLCK GE+++A LL+ KM            
Sbjct: 435 RQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIH 494

Query: 440 --------EIGK--NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
                   E GK     ++       N   D      M++ Y   G   +A K+  QL E
Sbjct: 495 GAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGE 554

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
            G  P I+T+NSL+ GFC    ++ A +L   ++L GL P++VTY TL+N        + 
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISG----RDDESMK 605
              +  +M      P+   Y  ++   C++ K   +     Q L D+       D  S  
Sbjct: 615 LLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES----CQLLEDMDAVGLTPDQVSYN 670

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           + I+ F +  ++  A Q   +M     +     Y I + G C  G +K+A N+   L   
Sbjct: 671 TIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPR 706
           K  +   +   +I   C +G +D A+  F   ++ GF +  R
Sbjct: 731 KVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIR 772



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 249/527 (47%), Gaps = 18/527 (3%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK-QLFLLALAVYYEMVK 161
           +LI G    G   +AL+    M+    +PD+  YN +L   FR   L   A  +  +M+ 
Sbjct: 321 ILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN-ILAKGFRLLGLINGAWNIIQKMLI 379

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               PN+VT+++LI G  + G  E A+K+  EM   G   +  + T+++  LC+  + D 
Sbjct: 380 KGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDV 439

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A++LF +M+ +G  PD + Y+ L++G CK   V +A+ L      +  +P    +  ++ 
Sbjct: 440 AFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILM 499

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL    +  +A  ++  +    +  D++LY +MI G  + G  ++A+KL   + E+GI P
Sbjct: 500 GLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISP 559

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               +N+L+ GFC    L QAR L   I      PN  T+T L+   C  G +    +L 
Sbjct: 560 TIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELL 619

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHD 460
           ++M+     P+   +  +I GLCK  +L+++  L   M+ +G  P              D
Sbjct: 620 SEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTP--------------D 665

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
           + S  T+++ +C A  + KA+++  ++      P  +TYN LINGFC  G++  A  L  
Sbjct: 666 QVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLV 725

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            LQ + +  +   Y T+I         + A   F QM + G   S   Y +++   C+R 
Sbjct: 726 SLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRC 785

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEM 626
             + A   +   L D    D +  +  +  F Q G + +  + L EM
Sbjct: 786 LVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 253/537 (47%), Gaps = 16/537 (2%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P++V+F+ +++   K G  +VA      M + G+LP+ ++Y I+I GLC      EA  L
Sbjct: 279 PSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDL 338

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
              M++ G  PD V YN L  GF  L  ++ A  +++     G  P L +Y+ LI G  +
Sbjct: 339 KNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQ 398

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
               +EA   Y++M     +  ++   V++  L ++ +V  A KL  +M   G+ PD   
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+ LI G C  G + QA  L  ++     +PN+     ++ G+C  G +  A+  F+ + 
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASL 464
            +     + ++N +IDG  K G   +A  L+ ++ E G +PT+               + 
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI--------------VTF 564

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            +++  +C    + +A ++L  +   G  P+ +TY +L+N +C+ GN+   L+L  E++ 
Sbjct: 565 NSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKA 624

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
           K + P  +TY  +I GL +  + +++ ++   M   G TP    Y +++   C+ R    
Sbjct: 625 KAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRK 684

Query: 585 AFSLWLQY-LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           AF L+ +  L ++          I  F   G++++A   L+ +  +  +     YT  + 
Sbjct: 685 AFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIK 744

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
             C  G V +A+  F  +VE    V+      +I  LCKR  +  A   F   L +G
Sbjct: 745 AHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDG 801



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/650 (22%), Positives = 294/650 (45%), Gaps = 16/650 (2%)

Query: 55  AKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDC 114
            K K L    S     S+L      ++ W   +E++            +++ G  +    
Sbjct: 203 VKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRF 262

Query: 115 EKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLL 174
           + A+  F   +  + QP V  +N +++   +     +A + +  M+K   LP+  ++++L
Sbjct: 263 QDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNIL 322

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           I+GL  +G    A+ + ++M   G+ P+  TY I+  G   +   + A+ +  KM   G 
Sbjct: 323 IHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGP 382

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           +P+ V Y  L+ G C++  V+EAL L +     GF   + S + L+  L ++++ D A+ 
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            + +M    + PD++ Y  +I GL + G+V+ A+ L   M    I+P++  + A++ G C
Sbjct: 443 LFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC 502

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
           + G + QAR     +   +   +   + I+I G  + G   +A KL+ ++ + G  P++ 
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIV 562

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            FN+L+ G C   +L +A  L   +++ G  P              +  +  T++  YC 
Sbjct: 563 TFNSLMYGFCINRKLSQARRLLDTIKLHGLEP--------------NAVTYTTLMNVYCE 608

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +    ++L ++      P  ITY  +I G CK   +  + +L +++   GL PD V+
Sbjct: 609 EGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVS 668

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+I    +      AF+++ +M  +   P+   Y  L+   C       A +L +   
Sbjct: 669 YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQ 728

Query: 594 -RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            R ++         I+    KG+V+ A+    +M  K  +  +  Y+  +  LC+   V 
Sbjct: 729 NRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVT 788

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
           EA   F +++             L++   + G+L+   ++    +K+G++
Sbjct: 789 EAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 178/412 (43%), Gaps = 68/412 (16%)

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V++ ++    S +  V DA+ +L  M++   +     YN+L+       ++    +   E
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYN---E 236

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           I    +  + +T +I++ G+CR     DA   F   E     PSV  FN ++   CK G 
Sbjct: 237 IKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGF 296

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++ A   F  M           L  G   + D  S   ++   C AG + +A  +   + 
Sbjct: 297 VDVAKSFFCMM-----------LKHG--LLPDAYSYNILIHGLCIAGSMGEALDLKNDME 343

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREE 548
             G  PD++TYN L  GF  +G INGA  + +++ +KG  P+ VTY  LI G  ++   E
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403

Query: 549 DAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIE 608
           +A +++ +M  +G   S      L+   C+ R+  +AF L+                   
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF------------------- 444

Query: 609 EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
                   E    GL           L  Y+  + GLC+ G+V++A+ ++  +  C   +
Sbjct: 445 -------CEMEANGLRP--------DLITYSTLIHGLCKQGEVQQAILLYEKM--CSNRI 487

Query: 669 TPPSCVK--LIHGLCKRG-------YLD------LAMDVFLYTLK-NGFILR 704
            P S +   ++ GLC++G       Y D      L++D+ LY +  +G+I R
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKR 539


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 246/523 (47%), Gaps = 50/523 (9%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY K+G  E A     KM++    P+V  +++++N   +K +   A+ V  EMV
Sbjct: 118 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 177

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           + N +PN + +++LI+G  K+G+ +VA     EM  R +  +   + I+++ L ++ R D
Sbjct: 178 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 237

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L + M   G  PD V Y +L++G+ K      AL++++  ++      + +Y+ LI
Sbjct: 238 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 297

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL R  +YD  Y   R M E  + PD               K +DA+ +L++M+  GI+
Sbjct: 298 KGLLRLGKYDPRYVCSR-MIELGLAPDC--------------KTEDALDILNEMKSYGIM 342

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   YN LI G C  G +++A S   E+   + +P   T   L+    R+   D   ++
Sbjct: 343 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 402

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             K+  +G   S+ ++N LI   C+ G   KA ++  +M           + +G +   D
Sbjct: 403 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEM-----------VKRGIS--AD 449

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVG----NINGAL 516
             +   ++  YCT   + KA K   Q+   G  P+I TYN+L+ G    G     +    
Sbjct: 450 LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETE 509

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
           KL  E+  +GL P++ TY  L++G  RV   +    +  +M   G  P+   Y  L++  
Sbjct: 510 KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 569

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENA 619
            +                  SG+  E+ + + + L KG + N+
Sbjct: 570 AK------------------SGKMIEARELLNDLLTKGRIPNS 594



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 249/521 (47%), Gaps = 46/521 (8%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G+ + G   +A   F +M E    P+   Y  ++N  F+    + A  +  +MV   
Sbjct: 16  ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 75

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
              +IVT + +++GL K GKT+ A ++ + + +  + PN  TY+ ++ G C++ + + A 
Sbjct: 76  ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 135

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +  KM+     P+ + +++++NG+ K   + +A+ +LR   +   +P    Y+ LIDG 
Sbjct: 136 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 195

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
           F+A   D A  + ++M   ++E   V++ +++  L   G++ +A  L+ DM  +GI PD 
Sbjct: 196 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDI 255

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD-------- 395
             Y +LI G+   G    A S+  E+ +++   +   +  LI G+ R G  D        
Sbjct: 256 VNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRM 315

Query: 396 ------------DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK---ME 440
                       DA  + N+M+  G  P+   +N LI GLCK G +EKA     +   ME
Sbjct: 316 IELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 375

Query: 441 IGKNPTLFLRLSQGGNR---------VHDK----------ASLQTMVEQYCTAGLIHKAY 481
               P     L +  +R         +H+K              T++  +C  G+  KA 
Sbjct: 376 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAK 435

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +L ++ + G   D++TYN+LI G+C   ++  ALK + ++ + G+ P+  TY TL+ GL
Sbjct: 436 VVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 495

Query: 542 QRVD----REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
                     E+  ++  +M + G  P+ A Y  L++   R
Sbjct: 496 SNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGR 536



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 233/530 (43%), Gaps = 81/530 (15%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           ++ G +KVG  ++A E F  + + +  P+   Y+A+L+   +     LA  V  +M K +
Sbjct: 86  VMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEH 145

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN++TFS +ING +K G    A+ +L EM QR ++PN   Y I+I G  +    D A 
Sbjct: 146 VPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVAD 205

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
               +MK        V ++ LLN   ++ R+DEA +L+      G  P + +Y+ LIDG 
Sbjct: 206 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 265

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK-------------------- 323
           F+      A +  ++M E+ I  DVV Y  +I+GL   GK                    
Sbjct: 266 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCK 325

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN--THTF 381
            +DA+ +L++M+  GI+P+   YN LI G C  G +++A S   E+   + +P   TH F
Sbjct: 326 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKF 385

Query: 382 TI---------------------------------LICGMCRNGMVDDAQKLFNKMEKAG 408
            +                                 LI   CR GM   A+ + ++M K G
Sbjct: 386 LVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRG 445

Query: 409 CFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNP------TLFLRLSQGG------ 455
               +  +NALI G C    +EKA   + +M + G  P      TL   LS  G      
Sbjct: 446 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMM 505

Query: 456 -------------NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSL 502
                          V + A+   +V  Y   G   K   + +++   G +P + TYN L
Sbjct: 506 EETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVL 565

Query: 503 INGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           I+ + K G +  A +L  +L  KG  P+S TY  L  G   +  E +  R
Sbjct: 566 ISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDR 615



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 263/609 (43%), Gaps = 31/609 (5%)

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M+    +P++VT S ++ G  + GK   A  +  EM + G+ PN  +Y  +I+ L +  R
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA+ L  +M   G S D V    +++G  K+ +  EA  +  +  K    P   +YS 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+DG  +  + + A    +KM +E + P+V+ +  +I G ++ G +  A+ +L +M +R 
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           ++P+T  Y  LI G+   G  D A     E+  R    +   F IL+  + R G +D+A+
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAG----------ELEKANLLFYKMEIGKNPTLF 448
            L   M   G  P +  + +LIDG  K G          E+++ N+ F  +         
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
           LRL +   R      ++  +   C       A  IL ++   G +P+ +TYN LI G CK
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKT---EDALDILNEMKSYGIMPNAVTYNILIGGLCK 357

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAV 568
            G +  A     E+ +    P  +T+  L+    R ++ +   +I  ++  +G   S  V
Sbjct: 358 TGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 417

Query: 569 YKSLMTWSCR---RRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLE 625
           Y +L+T  CR    RK  +     ++  R IS         I  +     VE A++   +
Sbjct: 418 YNTLITVFCRLGMTRKAKVVLDEMVK--RGISADLVTYNALIRGYCTGSHVEKALKTYSQ 475

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDG----QVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
           M        +  Y   L GL   G     ++E   + S + E   +    +   L+ G  
Sbjct: 476 MFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYG 535

Query: 682 KRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVG---- 737
           + G     + + +  +  GF+   +  N L+    ++K  K + A  LL  + + G    
Sbjct: 536 RVGNRKKTIILHIEMITKGFVPTLKTYNVLISD--YAKSGKMIEARELLNDLLTKGRIPN 593

Query: 738 ---YDLDAC 743
              YD+  C
Sbjct: 594 SFTYDILTC 602



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 189/391 (48%), Gaps = 30/391 (7%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR----------KQLFLLAL 153
           LI GY+K G+   AL    +MKE + + DV  YNA++    R           ++  L L
Sbjct: 261 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGL 320

Query: 154 A----------VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
           A          +  EM     +PN VT+++LI GL K+G  E A   LDEM     +P  
Sbjct: 321 APDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTP 380

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            T+  ++    +  +AD+  ++  K+  SG       YN L+  FC+L    +A  +L  
Sbjct: 381 ITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDE 440

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG- 322
             K G    L +Y+ LI G       ++A   Y +MF + I P++  Y  ++ GLS AG 
Sbjct: 441 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 500

Query: 323 ---KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
               +++  KL+S+M ERG+VP+   Y+ L+ G+  +G   +   L +E+  +  +P   
Sbjct: 501 MEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLK 560

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG---LCKAGELEKANLLF 436
           T+ +LI    ++G + +A++L N +   G  P+   ++ L  G   L    E++++    
Sbjct: 561 TYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRS 620

Query: 437 YKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           Y++E+ K   L + + + G +   KA ++ +
Sbjct: 621 YEIEVKK---LLIEMGRKGLKFSKKAEIRRL 648



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 9/295 (3%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           L+E++S  +   +  + +LI G  K G  EKA  +  +M   +  P    +  ++    R
Sbjct: 333 LNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSR 392

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +     L ++ ++V      ++  ++ LI    + G T  A  +LDEM +RGI  +  T
Sbjct: 393 SEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVT 452

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK----LRRVDEALALL 261
           Y  +I G C  +  ++A + + +M   G +P+   YN LL G          ++E   L+
Sbjct: 453 YNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 512

Query: 262 RSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
               + G VP   +Y  L+ G  R     +    + +M  +   P +  Y V+I   +++
Sbjct: 513 SEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKS 572

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGL---LDQA--RSLQVEIWK 371
           GK+ +A +LL+D+  +G +P+++ Y+ L  G+ +L     +D++  RS ++E+ K
Sbjct: 573 GKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIEVKK 627



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   Q  ++L +  + +   V+  LI+ + ++G   KA     +M +     D+  YNA+
Sbjct: 397 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 456

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG----KTEVAIKMLDEMT 195
           +           AL  Y +M      PNI T++ L+ GLS +G      E   K++ EM 
Sbjct: 457 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 516

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           +RG++PN  TY I++SG  ++    +   L ++M   G  P    YN L++ + K  ++ 
Sbjct: 517 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 576

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDG 282
           EA  LL      G +P   +Y  L  G
Sbjct: 577 EARELLNDLLTKGRIPNSFTYDILTCG 603


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 210/457 (45%), Gaps = 24/457 (5%)

Query: 137 NAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ 196
           NA+L++  R +     + V+  +   +C PN +++  L+  L ++GK + A   + EM +
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
             ++P+ FTY +VI  LC+  R   A   F  M +    PD V YN LL G CK  RV +
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A +L  S E  G  P   +Y+ LID   +  +++ AY   + M   K  P V  Y  +I 
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           GL +  KV  A +L  +M+  G  PD   YN LI G C    L +A+ L   + +    P
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQP 239

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           +  TFT LI G+C    + +A  LF  M K GC P +     L+  LC   +L  A  + 
Sbjct: 240 DKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVV 299

Query: 437 YKMEIGKNPTLF---LRLSQGGNRVHDKAS--LQTMVEQYCTAGLIH------------- 478
                     +    +    G  R  D+A+  LQ M  +     ++              
Sbjct: 300 RNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKE 359

Query: 479 --KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
             +AY+   ++ E G  PD++ YN L++GFCK   ++ A K+ + +   GL P+ VTY T
Sbjct: 360 GMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNT 419

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           L+    R  + E    +   M   G  P  A + +L+
Sbjct: 420 LVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLV 456



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 210/450 (46%), Gaps = 23/450 (5%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+    + G  +KA  +  +M      PDV+ YN V++   + +    A+  +  M +  
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 98

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT++ L+ GL K+G+   A  +   M   GI P+  TYT +I   C++ + + AY
Sbjct: 99  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            L   M    CSP   +Y +++NG CK R+VD+A  L    +  G  P   +Y+ LI GL
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
              +R  EA      M E   +PD + +  +I GL    ++K+A  L   M ++G  PD 
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT-FTILICGMCRNGMVDDAQKLFN 402
             +  L+   C L  L  A S+   +    + P     +T +   + R    D A +L  
Sbjct: 277 VTHTVLVSKLCILRKLRPALSV---VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQ 333

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDK 461
           KM + G  P+V  + A   GL    E  +A   F +M E G  P              D 
Sbjct: 334 KMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP--------------DM 379

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   +V+ +C A  +  A K++  + +SG  P+I+TYN+L+   C+ G +    +L   
Sbjct: 380 VAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHT 439

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
           +  +G +PD  T+ TL+ GL  V + + A+
Sbjct: 440 MVSRGRQPDVATWSTLVAGLFMVGQADAAY 469



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 201/451 (44%), Gaps = 58/451 (12%)

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           L+D L RA+R ++    +R++F +  +P+ + Y  +++ L   GK+  A   +++M    
Sbjct: 6   LLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREK 65

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
           +VPD + YN +I   C    + +A    +E ++    P+  T+  L+ G+C+NG V  A 
Sbjct: 66  LVPDVFTYNVVIDTLCKARRISRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQAC 121

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNR 457
            LF  ME AG  PS   +  LID  CK  + E A  L   M   K +PT++         
Sbjct: 122 SLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVY--------- 172

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
                S  +++   C    + +AY++  ++  +G  PD +TYN+LI+G C    ++ A  
Sbjct: 173 -----SYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKD 227

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
           L   +   G +PD +T+  LI GL   DR ++AF +F  M + GC P    +  L++  C
Sbjct: 228 LLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLC 287

Query: 578 RRRKFSLAFSLWLQY-------------LRDISGRD--DESMKSIEEFLQKGEVENAIQG 622
             RK   A S+   Y              R++  R   D + + +++  ++G   N +  
Sbjct: 288 ILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVT- 346

Query: 623 LLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHG 679
                          YT +  GL   G  KE +  +            P  V    L+ G
Sbjct: 347 ---------------YTAFFKGL---GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDG 388

Query: 680 LCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
            CK   LD+A  +  Y  ++G  L P +  Y
Sbjct: 389 FCKADRLDMAEKMVRYMDQSG--LPPNIVTY 417



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 98  SDVFFV-LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVY 156
           SDV +  LI  + K+   E A      M    C P VY Y +++N   + +    A  ++
Sbjct: 135 SDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLF 194

Query: 157 YEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
            EM    C P+ VT++ LI+GL    +   A  +L  M + G  P+K T+T +I GLC  
Sbjct: 195 EEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTT 254

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           +R  EA+ LF  M   GC+PD V +  L++  C LR++  AL+++R++        L  Y
Sbjct: 255 DRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVIL--Y 312

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +   L R + +D A    +KM    + P+VV Y    +GL +  +   A +    M E
Sbjct: 313 TPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLE 372

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           +GI PD   YN L+ GFC    LD A  +   + +    PN  T+  L+   CR G V+ 
Sbjct: 373 QGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEA 432

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
             +L + M   G  P V  ++ L+ GL   G+ + A
Sbjct: 433 IGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 137/343 (39%), Gaps = 33/343 (9%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           ++ TT+  V  K    +  +      A RK   +  S  ++I+ L K    D  +Q  +E
Sbjct: 137 VTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEE 196

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           ++          +  LI G        +A +    M E   QPD   + A++        
Sbjct: 197 MKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDR 256

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI-------------------- 188
              A  ++  M K  C P++VT ++L++ L    K   A+                    
Sbjct: 257 IKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIF 316

Query: 189 -------------KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
                        ++L +M +RG+ PN  TYT    GL        AYR F +M + G  
Sbjct: 317 RELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIE 376

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           PD VAYN L++GFCK  R+D A  ++R  ++ G  P + +Y+ L+    R  + +     
Sbjct: 377 PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 436

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
              M     +PDV  +  ++ GL   G+   A   L+    +G
Sbjct: 437 LHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 167/635 (26%), Positives = 288/635 (45%), Gaps = 65/635 (10%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           ++F++ SGY +     +A+E +  M      P V  Y +VL +AF K+     + +  EM
Sbjct: 189 IYFLVKSGYDR-----EAMEVYKVMATDGIVPSVRTY-SVLMLAFGKRDVETVVWLLREM 242

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
                 PN+ ++++ I  L ++G+ E A K+L +M   G  P+  T T++I  LC   R 
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302

Query: 220 DEAYRLFLKMKDSGCSPD-----------------------------------FVAYNAL 244
            +A  +F KMK S   PD                                    VAY A+
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAV 362

Query: 245 LNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKI 304
           ++  C++ RVDEA  +    ++ G  P+  SY+ LI G  +A R + A   +  M     
Sbjct: 363 VDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGP 422

Query: 305 EPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            P+   Y + I    ++G+   A+K    M+ +GIVPD    NA++      G L  A+ 
Sbjct: 423 TPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKR 482

Query: 365 LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLC 424
           +  E+      P+  T+T++I    +    D+A K+F++M +  C P V   N+LID L 
Sbjct: 483 VFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLY 542

Query: 425 KAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKI 483
           KAG   +A  +F+++ E+  +PT                +  T++      G + +   +
Sbjct: 543 KAGRGNEAWKIFHELKEMNLDPT--------------DCTYNTLLAGLGREGKVKEVMHL 588

Query: 484 LMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQR 543
           L ++  +   P++ITYN++++  CK G +N AL +   + +KG  PD  +Y T ++GL +
Sbjct: 589 LEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVK 648

Query: 544 VDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQY-LRDISGRDDE 602
            DR  +AFRIF QM +    P      +++    +    + A     +Y L+  S  D  
Sbjct: 649 EDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRS 707

Query: 603 SMKSI-EEFLQKGEVENAIQGLLEMDFK---LNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
           S  S+ E  L++  +E +I+    +      L+DF L+P    +  LC+  +  EA  + 
Sbjct: 708 SFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSP---LIRHLCKSKKALEAHELV 764

Query: 659 SVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVF 693
                    +   S   LI GL     +D+A  +F
Sbjct: 765 KKFESLGVSLKTGSYNALICGLVDENLIDVAEGLF 799



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 179/723 (24%), Positives = 309/723 (42%), Gaps = 54/723 (7%)

Query: 43  NPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNG-FDLYWQTLDELRSGNVSVVSDVF 101
           +P    + F   A++ R+     +   +  L++ +G      Q  D ++   V      F
Sbjct: 91  DPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTF 150

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
             +       G    A  +   MKE     + Y YN ++    +      A+ VY  M  
Sbjct: 151 LTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMAT 210

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
              +P++ T+S+L+    K    E  + +L EM   G+ PN ++YTI I  L Q  R +E
Sbjct: 211 DGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEE 269

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           AY++  KM+D GC PD V    L+   C   RV +A  +    +     P   +Y  L+D
Sbjct: 270 AYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLD 329

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
                         +  M  +    +VV Y  ++  L + G+V +A  +   M+++GI P
Sbjct: 330 KCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEP 389

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
             Y YN+LI GF     L+ A  L   +      PN +T+ + I    ++G    A K +
Sbjct: 390 QQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRY 449

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHD 460
             M+  G  P V   NA++  L K+G L  A  +F++++ IG  P              D
Sbjct: 450 ELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCP--------------D 495

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M++    A    +A K+  ++ E+  +PD++  NSLI+   K G  N A K+F 
Sbjct: 496 NITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFH 555

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           EL+   L P   TY TL+ GL R  + ++   +  +M  N   P+   Y +++   C+  
Sbjct: 556 ELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNG 615

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQ------ 634
           + +  ++L + Y   + G     M  +  +        A+ GL++ D     F+      
Sbjct: 616 EVN--YALGMLYNMTMKG----CMPDLSSY------NTALHGLVKEDRLTEAFRIFCQMK 663

Query: 635 --LAP-YTIW---LIGLCQDGQVKEALNIF-SVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
             LAP YT     L    ++G + EAL+     +++  +     S   L+ G+ KR  ++
Sbjct: 664 KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGME 723

Query: 688 LAMD-----VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDA 742
            +++          L + F L P     L+R L  SK  K + A+ L+ + +S+G  L  
Sbjct: 724 KSIEFAENIALSRILLDDFFLSP-----LIRHLCKSK--KALEAHELVKKFESLGVSLKT 776

Query: 743 CLY 745
             Y
Sbjct: 777 GSY 779



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/589 (25%), Positives = 265/589 (44%), Gaps = 59/589 (10%)

Query: 65   SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
            + +AV+  L K     +  +   EL+S  V   +  + ++I    K  + ++A++ F +M
Sbjct: 463  AGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEM 522

Query: 125  KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
             E  C PDV   N++++  ++      A  +++E+ ++N  P   T++ L+ GL + GK 
Sbjct: 523  IETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKV 582

Query: 185  EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
            +  + +L+EM      PN  TY  V+  LC+    + A  +   M   GC PD  +YN  
Sbjct: 583  KEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTA 642

Query: 245  LNGFCKLRRVDEAL------------------ALLRSFEKDGFVPRL------------- 273
            L+G  K  R+ EA                    +L SF K+G +                
Sbjct: 643  LHGLVKEDRLTEAFRIFCQMKKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS 702

Query: 274  ----GSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
                 S+  L++G+ +    +++  +   +   +I  D      +IR L ++ K  +A +
Sbjct: 703  KADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHE 762

Query: 330  LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L+      G+   T  YNALI G  D  L+D A  L  E+ +    P+  T+ +++  M 
Sbjct: 763  LVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMG 822

Query: 390  RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK-MEIGKNPT-- 446
            ++  ++D  K+  +M   G   +   +N +I GL K+  L +A  L+YK M  G +PT  
Sbjct: 823  KSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPC 882

Query: 447  --------------------LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                                LF  +   G +  ++A    ++  Y  AG   K  ++   
Sbjct: 883  TYGPLLDGLLKDGKIEDAEDLFDEMLDYGCK-PNRAIYNILLNGYRLAGNTEKVCELFQN 941

Query: 487  LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
            + + G  PDI +Y  LI   C  G +N +L  F++L   GL PD +TY  LI+GL R  R
Sbjct: 942  MVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGR 1001

Query: 547  EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
             E+A  +F  M ++G  P+   Y SL+ +  +  K + A  ++ + L++
Sbjct: 1002 LEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKN 1050



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 166/694 (23%), Positives = 306/694 (44%), Gaps = 47/694 (6%)

Query: 67   SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
            +AV+  L +    D      D+++   +      +  LISG+ K      ALE F  M  
Sbjct: 360  TAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNI 419

Query: 127  FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                P+ Y Y   +N   +    L A+  Y  M     +P++V  + ++  L+KSG+  +
Sbjct: 420  HGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGM 479

Query: 187  AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
            A ++  E+   G+ P+  TYT++I    + + ADEA ++F +M ++ C PD +A N+L++
Sbjct: 480  AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLID 539

Query: 247  GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
               K  R +EA  +    ++    P   +Y+ L+ GL R  +  E      +M      P
Sbjct: 540  TLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPP 599

Query: 307  DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +++ Y  ++  L + G+V  A+ +L +M  +G +PD   YN  + G      L +A  + 
Sbjct: 600  NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF 659

Query: 367  VEIWKRDSLPNTHTFTILICGMCRNGMVDDA-QKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             ++ K+   P+  T   ++    +NG++++A   L   + + G       F++L++G+ K
Sbjct: 660  CQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILK 718

Query: 426  AGELEKANLLFYKMEIGKNPTL---------------FLRLSQGGNRVHD--------KA 462
               +EK+      +E  +N  L                L  S+     H+          
Sbjct: 719  RAGMEKS------IEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGV 772

Query: 463  SLQTMVEQYCTAGLIHK-----AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
            SL+T        GL+ +     A  +  ++   G  PD  TYN +++   K   I   LK
Sbjct: 773  SLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLK 832

Query: 518  LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            + KE+  KG     VTY T+I+GL +     +A  ++ ++   G +P+P  Y  L+    
Sbjct: 833  VQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLL 892

Query: 578  RRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQKGEVENAIQGLLEMDFKLNDFQL 635
            +  K   A  L+ + L D   + + ++ +I    +   G  E   +    M  +  +  +
Sbjct: 893  KDGKIEDAEDLFDEML-DYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDI 951

Query: 636  APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDV 692
              YT+ +  LC  G++ ++L+ F  L E   +   P  +    LIHGL + G L+ A+ +
Sbjct: 952  KSYTVLIGALCTAGRLNDSLSYFRQLTE---LGLEPDLITYNLLIHGLGRSGRLEEAVSL 1008

Query: 693  FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
            F    K+G  + P +  Y    L   K+ K   A
Sbjct: 1009 FNDMEKSG--IAPNLYTYNSLILYLGKEGKAAEA 1040



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/602 (22%), Positives = 266/602 (44%), Gaps = 52/602 (8%)

Query: 29   LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
            ++ T +     K  N     + F    + + +    + +++I  L K    +  W+   E
Sbjct: 497  ITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHE 556

Query: 89   LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
            L+  N+      +  L++G  + G  ++ +    +M      P++  YN VL+   +   
Sbjct: 557  LKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGE 616

Query: 149  FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
               AL + Y M    C+P++ +++  ++GL K  +   A ++  +M ++ + P+  T   
Sbjct: 617  VNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCT 675

Query: 209  VISGLCQINRADEA-YRLFLKMKDSGCSPDFVAYNALLNG-------------------- 247
            ++    +    +EA + L   +   G   D  ++++L+ G                    
Sbjct: 676  ILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALS 735

Query: 248  ---------------FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEA 292
                            CK ++  EA  L++ FE  G   + GSY+ LI GL      D A
Sbjct: 736  RILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVA 795

Query: 293  YAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKG 352
               + +M     +PD   Y +++  + ++ +++D +K+  +M  +G       YN +I G
Sbjct: 796  EGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISG 855

Query: 353  FCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS 412
                 +L +A  L  ++      P   T+  L+ G+ ++G ++DA+ LF++M   GC P+
Sbjct: 856  LVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPN 915

Query: 413  VGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQY 471
              ++N L++G   AG  EK   LF  M + G NP              D  S   ++   
Sbjct: 916  RAIYNILLNGYRLAGNTEKVCELFQNMVDQGINP--------------DIKSYTVLIGAL 961

Query: 472  CTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDS 531
            CTAG ++ +     QL E G  PD+ITYN LI+G  + G +  A+ LF +++  G+ P+ 
Sbjct: 962  CTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNL 1021

Query: 532  VTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQ 591
             TY +LI  L +  +  +A +++ ++ +NG  P+   Y +L+           AF+ + Q
Sbjct: 1022 YTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQ 1081

Query: 592  YL 593
             +
Sbjct: 1082 MI 1083



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 168/340 (49%)

Query: 84   QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
            + + +  S  VS+ +  +  LI G       + A   F +MK   C PD + YN +L+  
Sbjct: 762  ELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAM 821

Query: 144  FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
             +       L V  EM         VT++ +I+GL KS     A+ +  ++   G  P  
Sbjct: 822  GKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTP 881

Query: 204  FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
             TY  ++ GL +  + ++A  LF +M D GC P+   YN LLNG+      ++   L ++
Sbjct: 882  CTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQN 941

Query: 264  FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
                G  P + SY+ LI  L  A R +++ +++R++ E  +EPD++ Y ++I GL  +G+
Sbjct: 942  MVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGR 1001

Query: 324  VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
            +++A+ L +DM + GI P+ Y YN+LI      G   +A  +  E+ K    PN  T+  
Sbjct: 1002 LEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNA 1061

Query: 384  LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
            LI G   +G  D+A   + +M   GC P+   +  L + L
Sbjct: 1062 LIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 181/372 (48%), Gaps = 15/372 (4%)

Query: 171  FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
             S LI  L KS K   A +++ +    G+     +Y  +I GL   N  D A  LF +MK
Sbjct: 744  LSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMK 803

Query: 231  DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
              GC PD   YN +L+   K  R+++ L + +     G+     +Y+ +I GL ++K   
Sbjct: 804  RLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLY 863

Query: 291  EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
            EA   Y K+  E   P    YG ++ GL + GK++DA  L  +M + G  P+   YN L+
Sbjct: 864  EAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILL 923

Query: 351  KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             G+   G  ++   L   +  +   P+  ++T+LI  +C  G ++D+   F ++ + G  
Sbjct: 924  NGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLE 983

Query: 411  PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            P +  +N LI GL ++G LE+A  LF  ME  G  P L+              +  +++ 
Sbjct: 984  PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLY--------------TYNSLIL 1029

Query: 470  QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
                 G   +A K+  +L ++G  P++ TYN+LI G+   G+ + A   + ++ + G  P
Sbjct: 1030 YLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPP 1089

Query: 530  DSVTYGTLINGL 541
            +S TY  L N L
Sbjct: 1090 NSSTYMQLPNQL 1101



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 3/334 (0%)

Query: 115  EKALESFGKMKEFD---CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
            +KALE+   +K+F+          YNA++     + L  +A  ++ EM +L C P+  T+
Sbjct: 755  KKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTY 814

Query: 172  SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
            +L+++ + KS + E  +K+  EM  +G      TY  +ISGL +     EA  L+ K+  
Sbjct: 815  NLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMS 874

Query: 232  SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
             G SP    Y  LL+G  K  ++++A  L       G  P    Y+ L++G   A   ++
Sbjct: 875  EGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEK 934

Query: 292  AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
                ++ M ++ I PD+  Y V+I  L  AG++ D++     + E G+ PD   YN LI 
Sbjct: 935  VCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIH 994

Query: 352  GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            G    G L++A SL  ++ K    PN +T+  LI  + + G   +A K++ ++ K G  P
Sbjct: 995  GLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKP 1054

Query: 412  SVGMFNALIDGLCKAGELEKANLLFYKMEIGKNP 445
            +V  +NALI G   +G  + A   + +M +G  P
Sbjct: 1055 NVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCP 1088


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 156/595 (26%), Positives = 268/595 (45%), Gaps = 20/595 (3%)

Query: 19  EPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA-SNSAVISMLLKPN 77
           E  +  LL  L  + V +V+    + +V  +FF WA ++ R R       +++ +L K  
Sbjct: 165 EGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTK 224

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
                 + L  ++   +    + F  ++  Y + G    AL+    M+    +P++ I N
Sbjct: 225 MCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICN 284

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
             +++  R      AL     M  +  +PN+VT++ +I G     + E AI++LD+M  +
Sbjct: 285 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSK 344

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDE 256
           G LP+K +Y  ++  LC+  R  E   L  KM K+ G   D V YN L++   K    DE
Sbjct: 345 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADE 404

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMI 315
           AL  L+  E+ GF      YS ++  L +  R  EA     +M  +    PDVV Y  ++
Sbjct: 405 ALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 464

Query: 316 RGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL 375
            G    G+V  A KLL  M   G  P+T  Y AL+ G C  G   +AR +     ++   
Sbjct: 465 NGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWS 524

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLL 435
           PN+ T+++L+ G+ + G + +A  +  +M   G FP     N L+  LC+ G   +A   
Sbjct: 525 PNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 584

Query: 436 FYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
              ME   N    + +           +  T++  +C    +  A  +L  +       D
Sbjct: 585 ---MEECLNKGCAINV----------VNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 631

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           + TY +L++   K G I  A +L K++  KG+ P  VTY T+I+   ++++ +D   I  
Sbjct: 632 VFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILE 691

Query: 556 QMP-QNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           +M  +  C     +Y  ++   C   K   A  L  + LR  S  D ++  ++ E
Sbjct: 692 KMILRQKCK---TIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALME 743



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 227/503 (45%), Gaps = 23/503 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKM 124
           +  I + ++ N  +   + L+ ++   V +V +V  +  +I GY  +   E+A+E    M
Sbjct: 284 NTTIDVFVRANRLEKALRFLERMQV--VGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDM 341

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGK 183
               C PD   Y  ++    +++  +    +  +M K + L  + VT++ LI+ L+K   
Sbjct: 342 PSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDH 401

Query: 184 TEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYN 242
            + A+  L +  ++G   +K  Y+ ++  LC+  R  EA  L  +M   G C PD V Y 
Sbjct: 402 ADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 461

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           A++NGFC+L  VD+A  LL+     G+ P   SY+ L++GL R  +  EA        E+
Sbjct: 462 AVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQ 521

Query: 303 KIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQA 362
              P+ + Y V++ GL + GK+ +A  ++ +M  +G  P     N L++  C  G   +A
Sbjct: 522 WWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 581

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
           R    E   +    N   FT +I G C+N  +D A  + + M        V  +  L+D 
Sbjct: 582 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDA 641

Query: 423 LCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
           L K G + +A  L  KM   G +PT                + +T++ +YC    +    
Sbjct: 642 LGKKGRIAEATELMKKMLHKGIDPT--------------PVTYRTVIHRYCQMEKVDDLV 687

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            IL ++        I  YN +I   C +G +  A KL  ++     R D+ T   L+ G 
Sbjct: 688 AILEKMILRQKCKTI--YNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGY 745

Query: 542 QRVDREEDAFRIFGQMPQNGCTP 564
            ++     A+++  +M      P
Sbjct: 746 LKIGVPLLAYKVACRMFNRNLIP 768



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 215/492 (43%), Gaps = 58/492 (11%)

Query: 211 SGLCQINRADEAYRLFLKM-----KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           S +C + R+ +  R+ LK      +      D + Y ++L    K +    A  +L   +
Sbjct: 178 SQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMK 237

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G      ++  ++    RA +  +A      M    +EP++++    I     A +++
Sbjct: 238 RRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLE 297

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILI 385
            A++ L  M+  GIVP+   YN +I+G+CDL  +++A  L  ++  +  LP+  ++  ++
Sbjct: 298 KALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIM 357

Query: 386 CGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
             +C+   + + + L  KM K  G       +N LI  L K    ++A L F K      
Sbjct: 358 GYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEA-LWFLK------ 410

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLP-DIITYNSLI 503
                   + G R+ DK     +V   C  G + +A  ++ ++   G+ P D++TY +++
Sbjct: 411 -----DAEEKGFRI-DKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 464

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           NGFC++G ++ A KL + +   G +P++V+Y  L+NGL R  +  +A  +     +   +
Sbjct: 465 NGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWS 524

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           P+                 S+ +S+ +  LR   G+  E+   + E + KG         
Sbjct: 525 PN-----------------SITYSVLMHGLRK-EGKLSEACDVVREMVLKG--------- 557

Query: 624 LEMDFKLNDFQLAPYTIWLI--GLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLC 681
                    F   P  I L+   LC+DG+  EA       +     +   +   +IHG C
Sbjct: 558 ---------FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 608

Query: 682 KRGYLDLAMDVF 693
           +   LD A+ V 
Sbjct: 609 QNDELDAALSVL 620



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 175/390 (44%), Gaps = 6/390 (1%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRS-GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMK 125
           SA++  L K          ++E+ S G+       +  +++G+ ++G+ +KA +    M 
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMH 484

Query: 126 EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTE 185
               +P+   Y A+LN   R    L A  +     +    PN +T+S+L++GL K GK  
Sbjct: 485 THGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLS 544

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A  ++ EM  +G  P      +++  LC+  R  EA +   +  + GC+ + V +  ++
Sbjct: 545 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 604

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           +GFC+   +D AL++L           + +Y+ L+D L +  R  EA    +KM  + I+
Sbjct: 605 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGID 664

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P  V Y  +I    +  KV D + +L  M  R      Y  N +I+  C LG L++A  L
Sbjct: 665 PTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIY--NQVIEKLCGLGKLEEADKL 722

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             ++ +  S  +  T   L+ G  + G+   A K+  +M      P V M   L   L  
Sbjct: 723 LGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVV 782

Query: 426 AGELEKANLLFYKMEIGKN---PTLFLRLS 452
            G     N+L Y   +  N   P+   RLS
Sbjct: 783 EGAGNDNNMLLYFSLVSDNLQIPSEATRLS 812



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 159/378 (42%), Gaps = 18/378 (4%)

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           D   Y ++++      +   AR + V + +R        F  ++    R G + DA K+ 
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHD 460
             M++AG  P++ + N  ID   +A  LEKA     +M++ G  P +             
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV------------- 315

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
             +   M+  YC    + +A ++L  +   G LPD ++Y +++   CK   I     L K
Sbjct: 316 -VTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 374

Query: 521 EL-QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++ +  GL  D VTY TLI+ L + D  ++A        + G       Y +++   C+ 
Sbjct: 375 KMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKE 434

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAP 637
            + S A  L  + L       D    +  +  F + GEV+ A + L  M           
Sbjct: 435 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVS 494

Query: 638 YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTL 697
           YT  L GLC+ G+  EA  + ++  E        +   L+HGL K G L  A DV    +
Sbjct: 495 YTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMV 554

Query: 698 KNGFILRPRVCNYLLRSL 715
             GF   P   N LL+SL
Sbjct: 555 LKGFFPGPVEINLLLQSL 572


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 246/506 (48%), Gaps = 19/506 (3%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++++L     +D   + ++ ++     + + +F  LI  Y +    EKAL++     +  
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
            +P  Y Y++++ +  +       L +Y +M+K   +P+  TF++LI+ L+K+ + E A 
Sbjct: 61  GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
            +  +M +  + P+ +TYTI+I  L  I R D   +LF  M   GC P+   Y+++++ F
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
               RVDEA  + +   + G  P   +Y+ LID   +  + + A+ +  K    +   + 
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGK---SRSFTNE 237

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V Y  ++  L   G ++  M+L   M+ +G+V +   Y  LI+     G ++    L +E
Sbjct: 238 VTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLE 297

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +   D   +  T   ++  + + G V+ A +LF  M+  G       +N LI+GL +AG+
Sbjct: 298 MVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGK 357

Query: 429 LEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
           L+ A  L  +ME  G  P +               +  T++  Y     +  A ++ +++
Sbjct: 358 LDAAGALLLEMEENGCAPNII--------------TYNTLISSYGKWSNLSAATRLFLEM 403

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDRE 547
            E G  P++++Y+SLI GF K G  + A+ LF+E++ +G  P+ VTY  LI+ L R  R 
Sbjct: 404 KERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRF 463

Query: 548 EDAFRIFGQMPQNGCTPSPAVYKSLM 573
             A     +M   GC     V KSL+
Sbjct: 464 GAAMEYLREMRDAGCQMGK-VTKSLL 488



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 230/495 (46%), Gaps = 23/495 (4%)

Query: 102 FVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK 161
             L+    +  D ++ +ES   M++   + D  ++N +++I     +   AL       K
Sbjct: 2   LTLLGAARRYDDVQRLVES---MQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTK 58

Query: 162 LNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADE 221
               P   T+S +I    K G  +  + M  +M +   +P+  T+ I+I  L + ++ +E
Sbjct: 59  EGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEE 118

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  +F  M     SPD   Y  L+     + R+D  + L  S    G  P L +Y  ++ 
Sbjct: 119 ACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMH 178

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
               A R DEA   +++M ++ ++PD V Y ++I    + G+++ A   +   R      
Sbjct: 179 AFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FT 235

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
           +   YN+L+      G +     L  ++  +  + N  T+ ILI  +   G V+D  +L+
Sbjct: 236 NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M        +   N ++D L KAG +E A  LF  M+            +G N   D 
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKF-----------KGLN--ADT 342

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +   ++     AG +  A  +L+++ E+G  P+IITYN+LI+ + K  N++ A +LF E
Sbjct: 343 VTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLE 402

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           ++ +G+ P+ V+Y +LI G  +  R + A  +F +M   GC P+   Y  L+    R  +
Sbjct: 403 MKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGR 462

Query: 582 FSLAFSLWLQYLRDI 596
           F  A    ++YLR++
Sbjct: 463 FGAA----MEYLREM 473



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 200/450 (44%), Gaps = 41/450 (9%)

Query: 1   ESSTLNEVLTILDTVTPIEPALEPLLPFLSK---------TTVTSVIMKTKNPQVGFRFF 51
           ++   N ++ I      +E AL+ L  F  +         +++  V MK  + Q G   +
Sbjct: 29  DTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMY 88

Query: 52  IWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKV 111
               K K +    + + +I  L K +  +       ++   NVS     + +LI     +
Sbjct: 89  KQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTI 148

Query: 112 GDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTF 171
           G  +  ++ F  M    CQP+++ Y++V++          A  ++ +MV+    P+ VT+
Sbjct: 149 GRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTY 208

Query: 172 SLLINGLSKSGKTEVA--------------------------------IKMLDEMTQRGI 199
           ++LI+   K+G+ E A                                +++  +M  +G+
Sbjct: 209 NILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGL 268

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           + N+ TY I+I  L    R ++ ++L+L+M D+    D V  N +L+   K  RV+ A  
Sbjct: 269 VSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFE 328

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLS 319
           L +  +  G      +Y+ LI+GL RA + D A A   +M E    P+++ Y  +I    
Sbjct: 329 LFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYG 388

Query: 320 EAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTH 379
           +   +  A +L  +M+ERG+ P+   Y++LI+GF   G  D A SL  E+      PN  
Sbjct: 389 KWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHV 448

Query: 380 TFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           T+ +LI  + R G    A +   +M  AGC
Sbjct: 449 TYNLLIDCLIRAGRFGAAMEYLREMRDAGC 478



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 134/268 (50%)

Query: 49  RFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGY 108
           R F +  K +   +  + ++++S L +        +   ++++  +      + +LI   
Sbjct: 223 RAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERL 282

Query: 109 YKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
              G  E   + + +M + D + D+   N VL+   +      A  ++ +M       + 
Sbjct: 283 GWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADT 342

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VT+++LINGL ++GK + A  +L EM + G  PN  TY  +IS   + +    A RLFL+
Sbjct: 343 VTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLE 402

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           MK+ G +P+ V+Y++L+ GF K  R D A++L R  + +G  P   +Y+ LID L RA R
Sbjct: 403 MKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGR 462

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           +  A  + R+M +   +   V   +++R
Sbjct: 463 FGAAMEYLREMRDAGCQMGKVTKSLLVR 490



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 191/474 (40%), Gaps = 65/474 (13%)

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
           A+RYD+       M +++ + D  L+  +I    EA  ++ A++ L+   + G  P  Y 
Sbjct: 8   ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y+++I+ F   G +     +  ++ K   +P+  TF ILI  + +   V++A  +F  M 
Sbjct: 68  YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASL 464
           K    P V  +  LI  L   G ++    LF  M   G  P LF              + 
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLF--------------TY 173

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
            +++  + +AG + +A  I  Q+ + G  PD +TYN LI+ F K G +  A     + + 
Sbjct: 174 HSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS 233

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL---MTWSCRRRK 581
                + VTY +L++ L R    +    +FGQM   G   +   Y  L   + W+ R   
Sbjct: 234 ---FTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVED 290

Query: 582 FSLAFSLWLQYLRDISGRDDESMKSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTI 640
               + L+L+ + +    D  ++ ++ + L K G VE A +   +M FK  +     Y I
Sbjct: 291 ---VWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNI 347

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
                                              LI+GL + G LD A  + L   +NG
Sbjct: 348 -----------------------------------LINGLGRAGKLDAAGALLLEMEENG 372

Query: 701 FILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSLLPG 754
               P +  Y      + K +    A  L   MK  G   +   Y    SL+ G
Sbjct: 373 --CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYS---SLIEG 421


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 236/497 (47%), Gaps = 48/497 (9%)

Query: 112 GDCEKALESFGKM-KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT 170
            D    + SF ++  + +  P ++ +  +L    +   +  A++++ +M       N+VT
Sbjct: 38  NDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVT 97

Query: 171 FSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMK 230
            ++LIN  S+ G+  ++  +   + ++G  PN  T T +I GLC            LK  
Sbjct: 98  LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLC------------LK-- 143

Query: 231 DSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                   V+Y  L+NG CK+ +   AL LLR  +     P +  Y+ +ID + + K  +
Sbjct: 144 --------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           EA+  Y +M  E I PDVV Y  +I G    GK+KDA+ L + M    I PD Y +N L+
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
            GFC  G + + +++   + K+   PN  T+  L+ G C    V+ A  +FN M + G  
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           P    +N +I+G CK  ++++A  LF KM                N + +  +  ++++ 
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHC-------------KNIIPNVVTYTSLIDG 362

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL--------FKEL 522
            C +G I  A K++ ++ + G  PDIITY+S+++  CK   ++ A+ L        F++L
Sbjct: 363 LCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDL 422

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
            +KG   D   Y  +I G        +A  +  +M  NG  P    Y+ ++    ++ + 
Sbjct: 423 FVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDEN 482

Query: 583 SLAFSLWLQYLRDISGR 599
            +A  L    LR++  R
Sbjct: 483 DMAEKL----LREMIAR 495



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 209/390 (53%), Gaps = 18/390 (4%)

Query: 151 LALAVYYEMVKLNCLPNIVT-------------FSLLINGLSKSGKTEVAIKMLDEMTQR 197
           L+ +V+  ++K    PN++T             +  LINGL K G+   A+++L  +  +
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
            + PN   Y  +I  +C++   +EA+ L+ +M   G SPD V Y+AL++GF  + ++ +A
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDA 232

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
           + L      +   P + +++ L+DG  +  +  E    +  M ++ I+P+VV Y  ++ G
Sbjct: 233 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
                +V  A  + + M + G+ PDT  YN +I GFC +  +D+A +L  ++  ++ +PN
Sbjct: 293 YCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPN 352

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+T LI G+C++G +  A KL ++M   G  P +  +++++D LCK  +++KA  L  
Sbjct: 353 VVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 412

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           K++      LF++   G N   D  +   M++ +C  GL ++A  +L ++ ++G +PD  
Sbjct: 413 KLKDQVFEDLFVK---GYNL--DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAK 467

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGL 527
           TY  +I    K    + A KL +E+  +GL
Sbjct: 468 TYEIIILSLFKKDENDMAEKLLREMIARGL 497



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 214/413 (51%), Gaps = 25/413 (6%)

Query: 52  IWAAKRKRLRSFASNSAVISMLLK--------PNGFDLYWQTLDELRSGNVSVVSDV--- 100
           I   ++  L+  ASN   +++L+         P  F ++   L +    NV  ++ +   
Sbjct: 80  ISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKG 139

Query: 101 ------FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALA 154
                 +  LI+G  KVG    AL+   ++     QP+V +YN +++   + +L   A  
Sbjct: 140 LCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 199

Query: 155 VYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLC 214
           +Y EMV     P++VT+S LI+G    GK + AI + ++M    I P+ +T+ I++ G C
Sbjct: 200 LYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFC 259

Query: 215 QINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLG 274
           +  +  E   +F  M   G  P+ V Y +L++G+C +++V++A ++  +  + G  P   
Sbjct: 260 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319

Query: 275 SYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDM 334
           SY+ +I+G  + K+ DEA   ++KM  + I P+VV Y  +I GL ++GK+  A+KL+ +M
Sbjct: 320 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEM 379

Query: 335 RERGIVPDTYCYNALIKGFCDLGLLDQARSL------QV--EIWKRDSLPNTHTFTILIC 386
            +RG+ PD   Y++++   C    +D+A +L      QV  +++ +    + + +T++I 
Sbjct: 380 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQ 439

Query: 387 GMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM 439
           G C  G+ ++A  L +KME  G  P    +  +I  L K  E + A  L  +M
Sbjct: 440 GFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 222/497 (44%), Gaps = 63/497 (12%)

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           + Q+   P  F +  ++  L +IN    A  L  +M+  G + + V  N L+N F +L +
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
              + ++  +  K G+ P + + + LI GL                         V YG 
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------------------VSYGT 148

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I GL + G+ + A++LL  +  + + P+   YN +I   C + L+++A  L  E+    
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEG 208

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+  T++ LI G    G + DA  LFNKM      P V  FN L+DG CK G++++  
Sbjct: 209 ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGK 268

Query: 434 LLF-YKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F   M+ G  P +    S              +++ YC    ++KA  I   +A+ G 
Sbjct: 269 TVFAMMMKQGIKPNVVTYCS--------------LMDGYCLVKQVNKANSIFNTMAQGGV 314

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            PD  +YN +INGFCK+  ++ A+ LFK++  K + P+ VTY +LI+GL +  +   A +
Sbjct: 315 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 374

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
           +  +M   G  P    Y S++   C+  +   A +L L  L+D         +  E+   
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL-LTKLKD---------QVFEDLFV 424

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           KG                 +  +  YT+ + G C  G   EAL + S + +   I    +
Sbjct: 425 KGY----------------NLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468

Query: 673 CVKLIHGLCKRGYLDLA 689
              +I  L K+   D+A
Sbjct: 469 YEIIILSLFKKDENDMA 485



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 12/303 (3%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
            FDLY + + E  S +V   S     LISG++ VG  + A++ F KM   + +PDVY +N
Sbjct: 197 AFDLYSEMVSEGISPDVVTYS----ALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFN 252

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            +++   +         V+  M+K    PN+VT+  L++G     +   A  + + M Q 
Sbjct: 253 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG 312

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G+ P+  +Y I+I+G C+I + DEA  LF KM      P+ V Y +L++G CK  ++  A
Sbjct: 313 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 372

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP--------DVV 309
           L L+      G  P + +YS ++D L +  + D+A A   K+ ++  E         DV 
Sbjct: 373 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVY 432

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            Y VMI+G    G   +A+ LLS M + G +PD   Y  +I         D A  L  E+
Sbjct: 433 AYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492

Query: 370 WKR 372
             R
Sbjct: 493 IAR 495



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 44/413 (10%)

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           + +   ++   ++ R + ++   P +  +G ++  L +      A+ L   M  +GI  +
Sbjct: 35  IIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASN 94

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
               N LI  F  LG    + S+   I K+   PN  T T LI G+C             
Sbjct: 95  LVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK----------- 143

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
                        +  LI+GLCK G+   A  L  +++              G  V    
Sbjct: 144 -----------VSYGTLINGLCKVGQARAALQLLRRVD--------------GKLVQPNV 178

Query: 463 SL-QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
            +  T+++  C   L+++A+ +  ++   G  PD++TY++LI+GF  VG +  A+ LF +
Sbjct: 179 VMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNK 238

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           + L+ ++PD  T+  L++G  +  + ++   +F  M + G  P+   Y SLM   C  ++
Sbjct: 239 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 298

Query: 582 FSLAFSLWLQYLRDISGRDDESMK-SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
            + A S++    +     D +S    I  F +  +V+ A+    +M  K     +  YT 
Sbjct: 299 VNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTS 358

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGLCKRGYLDLAM 690
            + GLC+ G++  AL +     E      PP  +    ++  LCK   +D A+
Sbjct: 359 LIDGLCKSGKISYALKLVD---EMHDRGVPPDIITYSSILDALCKNHQVDKAI 408



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 43/210 (20%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           L+ GY  V    KA   F  M +    PD   YN ++N   + +    A+ ++ +M   N
Sbjct: 289 LMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKN 348

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTY----------------- 206
            +PN+VT++ LI+GL KSGK   A+K++DEM  RG+ P+  TY                 
Sbjct: 349 IIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 408

Query: 207 --------------------------TIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
                                     T++I G C     +EA  L  KM+D+G  PD   
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFV 270
           Y  ++    K    D A  LLR     G +
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 100/238 (42%), Gaps = 16/238 (6%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           L +    P I  +  ++    K+   + A+ L ++++LKG+  + VT   LIN   ++ +
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS---------LWLQYLRDIS 597
              +F +F  + + G  P+     +L+   C +  +    +           LQ LR + 
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170

Query: 598 GR---DDESMKS--IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
           G+    +  M +  I+   +   V  A     EM  +     +  Y+  + G    G++K
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230

Query: 653 EALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           +A+++F+ ++         +   L+ G CK G +     VF   +K G  ++P V  Y
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG--IKPNVVTY 286


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 18/482 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRS-GNVSVVSDVFF-VLISGYYKVGDCEKALE 119
           S  + + ++   LK    D     L E+ + G+  + +DV + V+I+G  + GD E+A E
Sbjct: 203 SIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAE 262

Query: 120 SFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLS 179
               M+    +   + YN ++     +        +  EM     +P +VT++ +I+GL 
Sbjct: 263 LVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL 321

Query: 180 KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 239
           +SG  E A     EM   G+LP+  TY  +++G C+     EA  LF  ++ +G +P  +
Sbjct: 322 QSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVL 381

Query: 240 AYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKM 299
            YN  ++G+C+L  ++EA  L     + G +P + +Y+ L+ G         A  ++ +M
Sbjct: 382 TYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEM 441

Query: 300 FEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
             + ++PD   Y   I      G +  A++L   +   GI  DT  YN LI G C  G L
Sbjct: 442 LSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNL 501

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
             A+ LQ+++      P+  T+T LI   C  G++ +A+K+FN M   G  PS   F  +
Sbjct: 502 KDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVI 561

Query: 420 IDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           I   C+ G L  A   F KM E G  P              ++ +   ++   C  G   
Sbjct: 562 IHAYCRRGNLYSAYGWFRKMLEEGVEP--------------NEITYNVLIHALCRMGRTQ 607

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            A     ++ E G + +  TY  LI+G CKVGN   A++ + E+   G+ PD +T+  L+
Sbjct: 608 LASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667

Query: 539 NG 540
            G
Sbjct: 668 KG 669



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 232/490 (47%), Gaps = 55/490 (11%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL---NCLPNIVTFSLLINGLS 179
           +M +   +P +  YN +L+ +F K+     +A+  + ++     CLPN VT++++I GL+
Sbjct: 194 EMLQLGIEPSIVTYNTLLD-SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 252

Query: 180 KSGKTEVAIKMLD----------------------------------EMTQRGILPNKFT 205
           + G  E A ++++                                  EM   GI+P   T
Sbjct: 253 RKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVT 312

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFE 265
           Y  +I GL Q    + A   F +M+  G  PD + YN+LLNG+CK   + EAL L     
Sbjct: 313 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 372

Query: 266 KDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVK 325
           + G  P + +Y+  IDG  R    +EA     +M E+   P+V  Y ++++G      + 
Sbjct: 373 RAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLA 432

Query: 326 DAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV-EIWKRDSLP-NTHTFTI 383
            A +   +M  +G+ PD + YN  I     LG  D AR+L++ E+   + +  +T T+ I
Sbjct: 433 MAREFFDEMLSKGLQPDCFAYNTRICAELILG--DIARALELREVLMLEGISSDTVTYNI 490

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G+C+ G + DA++L  KM   G  P    +  LI   C+ G L +A  +F  M    
Sbjct: 491 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM---- 546

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                  +S G   +    +   ++  YC  G ++ AY    ++ E G  P+ ITYN LI
Sbjct: 547 -------ISDG--LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 597

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +  C++G    A   F E+  +GL  +  TY  LI+G  +V   EDA R + +M QNG  
Sbjct: 598 HALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIH 657

Query: 564 PSPAVYKSLM 573
           P    +K+L+
Sbjct: 658 PDYLTHKALV 667



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 247/543 (45%), Gaps = 50/543 (9%)

Query: 118 LESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLING 177
           L +F +M      PDV   N VL        +    AV+ EM++L   P+IVT++ L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 178 LSKSGKTEVAIKMLDEMTQRG--ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
             K G+ +    +L EM  RG   LPN  TY +VI+GL +    +EA  L   M+ S  +
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
             F  YN L+ G      V +   L    E +G +P + +Y+ +I GL ++   + A   
Sbjct: 274 SSFT-YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           + +M    + PDV+ Y  ++ G  +AG +K+A+ L  D+R  G+ P    YN  I G+C 
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
           LG L++AR L+ E+ ++  LPN  T+TIL+ G      +  A++ F++M   G  P    
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +N  I      G++ +A      +E+ +   +   +S       D  +   ++   C  G
Sbjct: 453 YNTRICAELILGDIARA------LEL-REVLMLEGISS------DTVTYNILIHGLCKTG 499

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            +  A ++ M++  +G  PD ITY  LI+  C+ G +  A K+F  +   GL P +VT+ 
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 559

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
            +I+   R      A+  F +M + G  P+   Y  L+   CR                 
Sbjct: 560 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM---------------- 603

Query: 596 ISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEAL 655
             GR   +     E L++G V N                   YT+ + G C+ G  ++A+
Sbjct: 604 --GRTQLASHHFHEMLERGLVANKYT----------------YTLLIDGNCKVGNWEDAM 645

Query: 656 NIF 658
             +
Sbjct: 646 RFY 648



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 252/582 (43%), Gaps = 65/582 (11%)

Query: 151 LALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVI 210
           L L+ + EM      P++   + ++  L  + + +    + +EM Q GI P+  TY  ++
Sbjct: 152 LCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLL 211

Query: 211 SGLCQINRADEAYRLFLKM--KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
               +  R D+   L  +M  + SGC P+ V YN ++ G  +   ++EA  L+       
Sbjct: 212 DSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK 271

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                 +Y+ LI GL       + Y    +M  E I P VV Y  MI GL ++G V+ A 
Sbjct: 272 KASSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 330

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
              ++MR  G++PD   YN+L+ G+C  G L +A  L  ++ +    P   T+ I I G 
Sbjct: 331 VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGY 390

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           CR G +++A+ L  +M + GC P+V  +  L+ G      L  A   F +M   G  P  
Sbjct: 391 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDC 450

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
           F              +  T +      G I +A ++   L   G   D +TYN LI+G C
Sbjct: 451 F--------------AYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLC 496

Query: 508 KVGNINGALKLFKELQLK----GLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           K GN+  A    KELQ+K    GL+PD +TY  LI+         +A +IF  M  +G  
Sbjct: 497 KTGNLKDA----KELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 552

Query: 564 PSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
           PS   +  ++   CRR     A+  W +             K +EE ++  E+       
Sbjct: 553 PSAVTFTVIIHAYCRRGNLYSAYG-WFR-------------KMLEEGVEPNEI------- 591

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKR 683
                         Y + +  LC+ G+ + A + F  ++E   +    +   LI G CK 
Sbjct: 592 -------------TYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKV 638

Query: 684 GYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
           G  + AM  +    +NG  + P   +YL    L    +  VH
Sbjct: 639 GNWEDAMRFYFEMHQNG--IHP---DYLTHKALVKGFDGHVH 675



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 205/476 (43%), Gaps = 61/476 (12%)

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +R+M    + PDV     ++R L +A +  D   +  +M + GI P    YN L+  F  
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 356 LGLLDQARSLQVEIWKRDS--LPNTHTFTILICGMCRNGMVDDAQKLFNKM---EKAGCF 410
            G  D+   L  E+  R S  LPN  T+ ++I G+ R G +++A +L   M   +KA  F
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 276

Query: 411 PSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
                +N LI GL   G ++K   L  +ME  G  PT+               +   M+ 
Sbjct: 277 ----TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV--------------VTYNAMIH 318

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
               +GL+  A     ++   G LPD+ITYNSL+NG+CK GN+  AL LF +L+  GL P
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 378

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
             +TY   I+G  R+   E+A  +  +M + GC P+   Y  LM  S      ++A   +
Sbjct: 379 TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFF 438

Query: 590 LQYLRD-----------------ISGRDDESMKSIEEFLQKGEVENA------IQGLL-- 624
            + L                   I G    +++  E  + +G   +       I GL   
Sbjct: 439 DEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKT 498

Query: 625 -------EMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSC 673
                  E+  K+    L P    YT  +   C+ G ++EA  IF+ ++    + +  + 
Sbjct: 499 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 558

Query: 674 VKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLL-FSKDNKKVHAYH 728
             +IH  C+RG L  A   F   L+ G        N L+ +L    +     H +H
Sbjct: 559 TVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFH 614



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 8/258 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + +L+ G   V     A E F +M     QPD + YN  +      +L L  +A   E+
Sbjct: 417 TYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRIC----AELILGDIARALEL 472

Query: 160 VKLNCLPNI----VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ 215
            ++  L  I    VT+++LI+GL K+G  + A ++  +M   G+ P+  TYT +I   C+
Sbjct: 473 REVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 532

Query: 216 INRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGS 275
                EA ++F  M   G  P  V +  +++ +C+   +  A    R   ++G  P   +
Sbjct: 533 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 592

Query: 276 YSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
           Y+ LI  L R  R   A   + +M E  +  +   Y ++I G  + G  +DAM+   +M 
Sbjct: 593 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 652

Query: 336 ERGIVPDTYCYNALIKGF 353
           + GI PD   + AL+KGF
Sbjct: 653 QNGIHPDYLTHKALVKGF 670


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 219/449 (48%), Gaps = 29/449 (6%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P ++ +  +L    +   + + ++++ +M       N+VT S+LIN  S+ G+  ++  +
Sbjct: 10  PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
              + ++G   +  T+T +I GLC      +A     K+   G   + V+Y  L+NG CK
Sbjct: 70  FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 310
           + +   AL  LR  +     P +  Y+ +IDGL + K  ++A+  Y +M  ++I P VV 
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189

Query: 311 YGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIW 370
           Y  +I GL    ++KDA+ LL  M    I P  Y ++ LI  FC  G + +A+++   + 
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249

Query: 371 KRDSLPNTHTFTILICGM--------------CRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           K D  PN  T+  L+ G                   MVD+A  LF +M     +P + ++
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIY 309

Query: 417 NALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           N+LIDGLCK+G    A     +M   G+ P +F              +  ++++  C   
Sbjct: 310 NSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIF--------------TYNSLLDALCKNY 355

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            + KA ++L +L + G  P + TYN LING CK G +  A K+F++L +KG   D  TY 
Sbjct: 356 HVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYN 415

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTP 564
            +I G  +    ++   +  +M  +GC+P
Sbjct: 416 AMIKGFCKKGLFDETLAMVSKMKDSGCSP 444



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 220/461 (47%), Gaps = 6/461 (1%)

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEA 222
           N  P+I  F  ++  L K+    + + +  +M   G+  N  T +I+I+   Q+ +   +
Sbjct: 7   NPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALS 66

Query: 223 YRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDG 282
           + +F  +   G   D + +  L+ G C    + +AL         GF     SY  LI+G
Sbjct: 67  FSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLING 126

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
           L +  +   A  + R++  + ++PDVV+Y  +I GL +   V DA  L  +M  + I P 
Sbjct: 127 LCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPS 186

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN LI G C +  L  A  L  ++   D  P  +TF+ILI   C+ G + +A+ +F 
Sbjct: 187 VVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFA 246

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH-DK 461
            M K    P++  +N+L+DG      ++KA  +F  M    +  + L       +++ D 
Sbjct: 247 VMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDM 306

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
               ++++  C +G    A K + ++   G  PDI TYNSL++  CK  +++ A++L  +
Sbjct: 307 VIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTK 366

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           L+ +G++P   TY  LINGL +  R +DA ++F  +   G       Y +++   C++  
Sbjct: 367 LKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGL 426

Query: 582 FSLAFSLWLQYLRDISGRDDESMKS---IEEFLQKGEVENA 619
           F    ++ +  ++D SG   ++      I     KGE + A
Sbjct: 427 FDETLAM-VSKMKD-SGCSPDAKNCEIIIRSLFDKGENDKA 465



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 214/472 (45%), Gaps = 28/472 (5%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           ++  L+K N + +      ++    ++       +LI+ Y ++G    +   F  + +  
Sbjct: 18  ILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKG 77

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
              D   +  ++     K     AL  + ++V      N V++  LINGL K G+T  A+
Sbjct: 78  YGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAAL 137

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           + L  +  + + P+   Y  +I GLC+    ++A+ L+ +M      P  V YN L+ G 
Sbjct: 138 EFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGL 197

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           C + ++ +A+ LL     +   P + ++S LID   +  +  EA   +  M +E ++P++
Sbjct: 198 CIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNI 257

Query: 309 VLYGVMIRGLSEAGKVK--------------DAMKLLSDMRERGIVPDTYCYNALIKGFC 354
           V Y  ++ G      VK              +AM L  +M  + I PD   YN+LI G C
Sbjct: 258 VTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLC 317

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G    A     E+  R   P+  T+  L+  +C+N  VD A +L  K++  G  PSV 
Sbjct: 318 KSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVC 377

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            +N LI+GLCK+G L+ A  +F  +           L +G N   D  +   M++ +C  
Sbjct: 378 TYNILINGLCKSGRLKDAEKVFEDL-----------LVKGYNT--DVYTYNAMIKGFCKK 424

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           GL  +   ++ ++ +SG  PD      +I      G  + A K F+E+ ++G
Sbjct: 425 GLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 160/355 (45%), Gaps = 49/355 (13%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI+G  KVG    ALE   ++     QPDV +YN +++   + +L   A  +Y+EMV   
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQ-------- 215
             P++VT++ LI GL    + + AI +L +M    I P  +T++I+I   C+        
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 216 -----------------------------------------INRADEAYRLFLKMKDSGC 234
                                                    I   DEA  LF +M     
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQI 302

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD V YN+L++G CK  R   AL  +      G  P + +Y+ L+D L +    D+A  
Sbjct: 303 YPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIE 362

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              K+ ++ I+P V  Y ++I GL ++G++KDA K+  D+  +G   D Y YNA+IKGFC
Sbjct: 363 LLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFC 422

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
             GL D+  ++  ++      P+     I+I  +   G  D A K    + +  C
Sbjct: 423 KKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKFREMIVRGKC 477



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 210/504 (41%), Gaps = 63/504 (12%)

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
           +P    +  +L    K       ++L R  E +G    L + S LI+   +  +   +++
Sbjct: 9   TPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFS 68

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            +  + ++    D + +  +I+GL   G++  A+     +  +G   +   Y  LI G C
Sbjct: 69  VFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLC 128

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
            +G    A      I  +   P+   +  +I G+C++ +V+DA  L+ +M      PSV 
Sbjct: 129 KVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVV 188

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            +N LI GLC   +L+ A  L +KM +   NPT++              +   +++ +C 
Sbjct: 189 TYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVY--------------TFSILIDAFCK 234

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGF--------------CKVGNINGALKLF 519
            G + +A  +   + +    P+I+TYNSL++G                 +  ++ A+ LF
Sbjct: 235 EGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLF 294

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           +E+  K + PD V Y +LI+GL +  R   A +  G+M   G  P    Y SL+   C+ 
Sbjct: 295 EEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKN 354

Query: 580 RKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYT 639
                A  L L  L+D                         QG+           +  Y 
Sbjct: 355 YHVDKAIEL-LTKLKD-------------------------QGIQP--------SVCTYN 380

Query: 640 IWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKN 699
           I + GLC+ G++K+A  +F  L+         +   +I G CK+G  D  + +      +
Sbjct: 381 ILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDS 440

Query: 700 GFILRPRVCNYLLRSLLFSKDNKK 723
           G     + C  ++RSL    +N K
Sbjct: 441 GCSPDAKNCEIIIRSLFDKGENDK 464



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 7/201 (3%)

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           M L      P I  +  ++    K  + +  + L ++++  GL  + VT   LIN   ++
Sbjct: 1   MLLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQL 60

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
            +   +F +F  + + G       + +L+   C + +   A     + +      +  S 
Sbjct: 61  GQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSY 120

Query: 605 KSIEEFLQK-GEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
            ++   L K G+   A++ L  +D KL    +  Y   + GLC+D  V +A N++  +V 
Sbjct: 121 GTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVA 180

Query: 664 ---CKAIVTPPSCVKLIHGLC 681
              C ++VT  +   LI GLC
Sbjct: 181 KRICPSVVTYNT---LICGLC 198



 Score = 39.3 bits (90), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 2/136 (1%)

Query: 63  FASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFG 122
           F  NS ++  L K    D   + L +L+   +      + +LI+G  K G  + A + F 
Sbjct: 342 FTYNS-LLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFE 400

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG 182
            +       DVY YNA++    +K LF   LA+  +M    C P+     ++I  L   G
Sbjct: 401 DLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRSLFDKG 460

Query: 183 KTEVAIKMLDEMTQRG 198
           + + A K   EM  RG
Sbjct: 461 ENDKAGK-FREMIVRG 475


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 250/520 (48%), Gaps = 44/520 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P  VT+++LI+     G   +A   L ++ + G+  N  ++T ++  LC   R  +A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 226 FLKMKDS-GCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG--FVPRLGSYSCLIDG 282
            ++     GC+PD  +Y  LL G C  ++ +EA+ L+    +DG    P + SY+ +I G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            F+     +AY  + +M +  I PDVV    +I GL +   +  A ++L  M ++ I+PD
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN+L+ G+   G L +A  +  ++ +    PN  T+++LI  +C+ G   +A+++ N
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            M ++   P+V  +  L+ G    G+L E  NL+   ++ G  P              D 
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRP--------------DH 296

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKE 521
                 +  Y   G + +A     ++ + G +PDII+Y ++I+G CK+G ++ A+  F +
Sbjct: 297 HIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQ 356

Query: 522 LQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRK 581
           +   GL PD V +  LI+G     + E A  +F +M   G  P+  V+ +++    +  K
Sbjct: 357 MIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGK 416

Query: 582 FSLAFSLW-----------------LQYLRDISGRDDESMKSIEEFLQKGEVENAI---- 620
            + A +L+                 + +   ++G+ DE +K +++ L  G   NA+    
Sbjct: 417 VTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT 476

Query: 621 --QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
               +L M  K +   +A     +   C+DG++++ L +F
Sbjct: 477 LLDDMLSMGLKPD---VATCNTLIDSCCEDGRIEDVLTLF 513



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 228/475 (48%), Gaps = 33/475 (6%)

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL--NCLPNIVTFSLLINGLSKSGKTEV 186
           C PDV+ Y  +L     ++    A+ + + M +   +C PN+V+++ +I+G  K  +   
Sbjct: 80  CTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGK 139

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  +  EM  RGI P+  T   +I GLC++   D+A  +  +M D    PD   YN+L++
Sbjct: 140 AYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVH 199

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+    ++ EA+ +L+   + G  P   +YS LID L +   + EA      M + +  P
Sbjct: 200 GYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNP 259

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           +V  YG ++ G +  G + +   L+  M + G+ PD + +N  I  +   G LD+A    
Sbjct: 260 NVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTF 319

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++ ++  +P+  ++  +I G+C+ G +D A   F +M   G  P + +F  LI G    
Sbjct: 320 NKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMY 379

Query: 427 GELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G+ EKA  LFY+ M+ G  PT+ +                TM+++    G + +A  +  
Sbjct: 380 GKWEKAEELFYEMMDRGIRPTVVV--------------FTTMIDKLFKEGKVTEAKTLFD 425

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            +  +   P++++YN++I+G+   G ++  LKL  ++   GL+P++VT+ TL++      
Sbjct: 426 LMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD------ 479

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRD 600
                      M   G  P  A   +L+   C   +     +L+ + L   +  D
Sbjct: 480 ----------DMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTD 524



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 31/434 (7%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G++K  +  KA   F +M +    PDV   N++++   + Q    A  V  +M 
Sbjct: 124 YTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF 183

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             + +P+  T++ L++G   SG+ + A+++L +M++ G  PN  TY+++I  LC+     
Sbjct: 184 DKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHT 243

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +   M  S  +P+   Y  LL+G+     + E   L+    ++G  P    ++  I
Sbjct: 244 EAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQI 303

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +  R DEA   + KM ++ + PD++ YG MI GL + G++  AM     M + G+ 
Sbjct: 304 YAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLS 363

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   +  LI GF   G  ++A  L  E+  R   P    FT +I  + + G V +A+ L
Sbjct: 364 PDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTL 423

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           F+ M  A   P+V  +NA+I G   AG+L++   LL   + +G  P              
Sbjct: 424 FDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKP-------------- 469

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  T+++   + GL                 PD+ T N+LI+  C+ G I   L LF
Sbjct: 470 NAVTFNTLLDDMLSMGL----------------KPDVATCNTLIDSCCEDGRIEDVLTLF 513

Query: 520 KELQLKGLRPDSVT 533
           +E+  K  + D+VT
Sbjct: 514 REMLSKAAKTDTVT 527



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 166/410 (40%), Gaps = 54/410 (13%)

Query: 29  LSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDE 88
           +S TTV     K       +  F     R       + +++I  L K    D   + L +
Sbjct: 122 VSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQ 181

Query: 89  LRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           +   ++      +  L+ GY   G  ++A+    +M      P+   Y+ +++   +   
Sbjct: 182 MFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGG 241

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLS----------------------------- 179
              A  +   M++    PN+ T+  L++G +                             
Sbjct: 242 HTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNI 301

Query: 180 ------KSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG 233
                 K G+ + A+   ++M Q+G++P+  +Y  +I GLC+I R D A   F +M D G
Sbjct: 302 QIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDG 361

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
            SPD V +  L++GF    + ++A  L       G  P +  ++ +ID LF+  +  EA 
Sbjct: 362 LSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAK 421

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE----------------- 336
             +  M    ++P+VV Y  +I G   AGK+ + +KLL DM                   
Sbjct: 422 TLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDM 481

Query: 337 --RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTIL 384
              G+ PD    N LI   C+ G ++   +L  E+  + +  +T T  I+
Sbjct: 482 LSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 168/377 (44%), Gaps = 33/377 (8%)

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
           + + P T  Y  LI   C +G L+ A +   +I K     N  +FT ++  +C      D
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 397 AQKLFNK-MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           A  +  +   K GC P V  +  L+ GLC   + E+A  L + M              G 
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMA-----------EDGD 115

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           +   +  S  T++  +     + KAY +  ++ + G  PD++T NS+I+G CKV  ++ A
Sbjct: 116 HCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKA 175

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            ++ +++  K + PD  TY +L++G     + ++A RI  QM ++G  P+   Y  L+  
Sbjct: 176 EEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDC 235

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS----IEEFLQKGE-------VENAIQGLL 624
            C+    + A  +       I  R + ++ +    +  +  KG+       ++  +Q  +
Sbjct: 236 LCKFGGHTEAREILNSM---IQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGV 292

Query: 625 EMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
             D  + + Q+  Y        + G++ EA+  F+ + +   +    S   +I GLCK G
Sbjct: 293 RPDHHIFNIQIYAYV-------KCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIG 345

Query: 685 YLDLAMDVFLYTLKNGF 701
            LD AM  F   + +G 
Sbjct: 346 RLDAAMSQFCQMIDDGL 362


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 249/566 (43%), Gaps = 56/566 (9%)

Query: 18  IEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPN 77
           +E  L  LL  L    V +V+    + ++   FF WA ++ R R    +  V  M+L+  
Sbjct: 90  LEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRH---DPIVYYMMLQVL 146

Query: 78  GFDLYWQ----TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDV 133
                 Q     L  +    ++   + F  ++  Y + G    A++    M++   +P++
Sbjct: 147 SKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNL 206

Query: 134 YIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDE 193
            I N  +++         AL     M  +   PN+VT++ LI G     + E A++++ E
Sbjct: 207 LICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAE 266

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLR 252
           M  +G  P+K +Y  V+  LCQ  R  E   L  KM KD+   PD V YN L++   K  
Sbjct: 267 MPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHG 326

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
             DEAL  LR  E+ GF      YS +++      R D A     +M  +   PDVV Y 
Sbjct: 327 HADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYT 386

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
            ++ GL + GKV++A K+L  M + G  P+T  Y AL+ G C  G   +AR +     + 
Sbjct: 387 AVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEED 446

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              PN  T+++++ G+ R G + +A  +  +M   G FP+    N LI  LC        
Sbjct: 447 WWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLC-------- 498

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
                             L Q  N                      +A K + +    G 
Sbjct: 499 ------------------LEQKMN----------------------EAKKFMEECLNRGC 518

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             + + + ++I+GFC+  NI+ AL L  ++ L    PD+VT+  +I+ L +  R E+A  
Sbjct: 519 AVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATV 578

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCR 578
              +M + G  P+P  Y++++   C+
Sbjct: 579 YTMKMLKKGLDPTPVTYRAVIHQYCK 604



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 243/544 (44%), Gaps = 20/544 (3%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +  I +L+  N  +   + L+ ++   ++     +  LI GY  +   E A+E   +M  
Sbjct: 210 NTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPF 269

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCL-PNIVTFSLLINGLSKSGKTE 185
             C PD   Y  V+    + +       +  +MVK N L P+ VT++ L++ LSK G  +
Sbjct: 270 KGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHAD 329

Query: 186 VAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALL 245
            A++ L E  +RG   +K  Y+ +++  C   R D A  +  +M   GCSPD V Y A++
Sbjct: 330 EALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVV 389

Query: 246 NGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
           NG CK+ +V+EA  +L+   K G  P   SY+ L++GL +     EA        E+   
Sbjct: 390 NGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWT 449

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+ + Y V++ GL   GK+ +A  ++ +M  +G  P     N LIK  C    +++A+  
Sbjct: 450 PNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKF 509

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E   R    N   FT +I G C++  +D A  L + M      P    F A+ID L K
Sbjct: 510 MEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGK 569

Query: 426 AGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKIL 484
            G +E+A +   KM + G +PT                + + ++ QYC  G + +  K+L
Sbjct: 570 KGRIEEATVYTMKMLKKGLDPT--------------PVTYRAVIHQYCKMGRVEELIKLL 615

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
            ++           YN +I   C  GN   A K+   +     R D+ T   L+      
Sbjct: 616 GKMLSRSKCR--TAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSK 673

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR--DISGRDDE 602
                A+++  +M      P   + + L        K   A +L LQ+++  +IS    +
Sbjct: 674 GIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPDSSQ 733

Query: 603 SMKS 606
            +KS
Sbjct: 734 HLKS 737


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 269/583 (46%), Gaps = 58/583 (9%)

Query: 38  IMKTKNPQVGFRFFIWAA-----KRKRLRSFASNSAVISMLLKPNGFDL----------- 81
           I+K ++ +  FR F  ++     K   L+SF   SAVI +L   + + L           
Sbjct: 82  ILKCRSAEEAFRLFETSSISRLSKTTDLQSF---SAVIHVLTGAHKYTLARCLIKSLIER 138

Query: 82  -------------YWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
                         +  L++++S   S+   VF +LI  + ++G  E AL      +E  
Sbjct: 139 LRRYSEPTNISHRLFNALEDIQSPKFSI--GVFSLLIMEFLEMGLFEDAL---WVSREMR 193

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C PD     A+LN   R++ F      Y  M+    +P++  +S+L     K G      
Sbjct: 194 CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKE 253

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
           K+LDEMT  G+ PN + YTI I  LC+ N+ +EA ++F  MK  G  P+   Y+A+++G+
Sbjct: 254 KLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGY 313

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
           CK   + +A  L +       +P +  +  L+DG  +A+    A + +  M +  ++P++
Sbjct: 314 CKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNL 373

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
            +Y  +I G  ++G + +AM LLS+M    + PD + Y  LI G C    L +A  L   
Sbjct: 374 YVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQR 433

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGE 428
           +      P++ T+  LI G C+   ++ A  L ++M  +G  P++  F+ LIDG CK   
Sbjct: 434 MKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRN 493

Query: 429 LEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLA 488
           ++ A  L+++M I                V D  +  T+++ +     + +A ++   + 
Sbjct: 494 IKAAMGLYFEMTI-------------KGIVPDVVTYTTLIDAHFKEANMKEALRLYSDML 540

Query: 489 ESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL----KGLRPDS----VTYGTLING 540
           E+G  P+  T+  L++GF K G ++ A+  + E       K +   S    V +  LI G
Sbjct: 541 EAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEG 600

Query: 541 LQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFS 583
           L +      A R F  M   G TP    Y S++    R ++ +
Sbjct: 601 LCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRIT 643



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 206/440 (46%), Gaps = 24/440 (5%)

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
           ++  CSPD  A  A+LNG  + RR D      +     G VP +  YS L    F+    
Sbjct: 190 REMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFP 249

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
            +      +M    ++P+V +Y + IR L    K+++A K+   M+  G+VP+ Y Y+A+
Sbjct: 250 SKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAM 309

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           I G+C  G L QA  L  EI   + LPN   F  L+ G C+   +  A+ LF  M K G 
Sbjct: 310 IDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGV 369

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMV 468
            P++ ++N LI G CK+G + +A  L  +ME +  +P +F              +   ++
Sbjct: 370 DPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVF--------------TYTILI 415

Query: 469 EQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLR 528
              CT   + +A ++  ++      P  +TYNSLI+GFCK  NI  AL L  E+   G+ 
Sbjct: 416 NGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVE 475

Query: 529 PDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSL 588
           P+ +T+ TLI+G  +V   + A  ++ +M   G  P    Y +L+    +      A  L
Sbjct: 476 PNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRL 535

Query: 589 WLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIW------ 641
           +   L      +D +    ++ F ++G + +AI   LE +       +   + W      
Sbjct: 536 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFT 595

Query: 642 --LIGLCQDGQVKEALNIFS 659
             + GLCQ+G +  A   FS
Sbjct: 596 CLIEGLCQNGYILRASRFFS 615



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 50/375 (13%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
           VF  L+ G+ K  +   A   F  M +F   P++Y+YN +++   +    L A+ +  EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
             LN  P++ T+++LINGL    +   A ++   M    I P+  TY  +I G C+    
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
           ++A  L  +M  SG  P+ + ++ L++G+CK+R +  A+ L       G VP + +Y+ L
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTL 519

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM----------- 328
           ID  F+     EA   Y  M E  I P+   +  ++ G  + G++ DA+           
Sbjct: 520 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 329 --------------------------------KLLSDMRERGIVPDTYCYNALIKGFCDL 356
                                           +  SDM+  G+ PD + Y +++K     
Sbjct: 580 GKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLRE 639

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPS---- 412
             +     L  ++ K   LPN     +L      NG +  A  L N       F +    
Sbjct: 640 KRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACFLTNSSRLGTIFKNTCNS 699

Query: 413 ---VGMFNALIDGLC 424
              + +F+  + G+C
Sbjct: 700 IFLITVFHCKMYGIC 714



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 196/485 (40%), Gaps = 118/485 (24%)

Query: 219 ADEAYRLFLKMKDSGCS--PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
           A+EA+RLF     S  S   D  +++A+++      +   A  L++S             
Sbjct: 88  AEEAFRLFETSSISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKS------------- 134

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFE--EKIEP---DVVLYGVMIRGLSEAGKVKDAMKLL 331
             LI+   R +RY E      ++F   E I+     + ++ ++I    E G  +DA+ + 
Sbjct: 135 --LIE---RLRRYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVS 189

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
            +MR     PD+    A++ G       D        +  R  +P+ H +++L     + 
Sbjct: 190 REMR---CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQ 246

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G     +KL ++M   G  P+V ++   I  LC+  ++E+A  +F  M+           
Sbjct: 247 GFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMK----------- 295

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
                                    IH            G +P++ TY+++I+G+CK GN
Sbjct: 296 -------------------------IH------------GVVPNLYTYSAMIDGYCKTGN 318

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
           +  A  L+KE+ +  L P+ V +GTL++G  +      A  +F  M + G  P+  VY  
Sbjct: 319 LRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNC 378

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLN 631
           L+   C+                  SG   E+M                 GLL    ++ 
Sbjct: 379 LIHGQCK------------------SGNMLEAM-----------------GLLS---EME 400

Query: 632 DFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
              L+P    YTI + GLC + ++ EA  +F  +   +   +  +   LIHG CK   ++
Sbjct: 401 SLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIE 460

Query: 688 LAMDV 692
            A+D+
Sbjct: 461 KALDL 465



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 8/195 (4%)

Query: 87  DELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRK 146
            E+ S  V      F  LI GY KV + + A+  + +M      PDV  Y  +++  F++
Sbjct: 467 SEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKE 526

Query: 147 QLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ----RGILPN 202
                AL +Y +M++    PN  TF+ L++G  K G+   AI    E  Q    + I+  
Sbjct: 527 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQR 586

Query: 203 K----FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
                  +T +I GLCQ      A R F  MK  G +PD  +Y ++L    + +R+ + +
Sbjct: 587 SCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTM 646

Query: 259 ALLRSFEKDGFVPRL 273
            L     K G +P L
Sbjct: 647 MLHCDMIKTGILPNL 661



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 8/253 (3%)

Query: 495 DIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIF 554
            I  ++ LI  F ++G    AL + +E++     PDS     ++NGL R  R +  +  +
Sbjct: 165 SIGVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKACLAILNGLVRRRRFDSVWVDY 221

Query: 555 GQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI--EEFLQ 612
             M   G  P   +Y S++   C ++ F       L  +  +  + +  + +I   +  +
Sbjct: 222 QLMISRGLVPDVHIY-SVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCR 280

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPS 672
           + ++E A +    M        L  Y+  + G C+ G +++A  ++  ++  + +     
Sbjct: 281 ENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVV 340

Query: 673 CVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCR 732
              L+ G CK   L  A  +F++ +K G      V N L+      K    + A  LL  
Sbjct: 341 FGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ--CKSGNMLEAMGLLSE 398

Query: 733 MKSVGYDLDACLY 745
           M+S+    D   Y
Sbjct: 399 MESLNLSPDVFTY 411


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 252/570 (44%), Gaps = 51/570 (8%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           ++I   +K +  D      D+++    +    ++ V+I G     D +KAL  + +MK F
Sbjct: 175 SLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGF 234

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVT--FSLLINGLSKSGKTE 185
             QPDV I   +++ +F K+     L  ++E +  +  P   T  ++ ++N L  +G   
Sbjct: 235 KIQPDVKIVTKLIS-SFSKEE---ELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVH 290

Query: 186 VAIKMLDEMTQ-------------RG---ILPNKFTYTIVISGLCQINRADEAYRLFLKM 229
            A  +L  +T              RG   + PN  T++IVI+GL +    D A  LF  M
Sbjct: 291 KAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDM 350

Query: 230 KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY 289
              GC PD + YN L++G C   R+ E+  LL+  E+ G  P   + +C+   L R    
Sbjct: 351 ARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDI 410

Query: 290 DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNAL 349
             A    +KM      P +     +++ L + GK  +A K L DM E G  PD   Y+A 
Sbjct: 411 SGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSAC 470

Query: 350 IKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGC 409
           + G   +  +DQA  L  +I  +   P+   + ILI G+C+   + +AQ L ++ME+ G 
Sbjct: 471 LDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGL 530

Query: 410 FPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
            PS   +N LIDGLCK   LE+A +LF  M I K             R  +  +  T++ 
Sbjct: 531 VPSAVTYNTLIDGLCKTDHLEEA-MLFLSMMIEKE------------REPNVITYSTLIN 577

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
             C AG    A  +  ++   G  P  I Y + I+G    G  N AL   +E++ + ++P
Sbjct: 578 GLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKP 637

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW 589
           D+  Y  L+N       +  AF I  +M   G  P       +       R   L FS  
Sbjct: 638 DTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISV-----RNAILKFS-- 690

Query: 590 LQYLRDISGRDDESMKSIEEFLQKGEVENA 619
                     D  +  SI+  L KG + +A
Sbjct: 691 ---------EDARTSSSIKNLLAKGSIPSA 711



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 256/592 (43%), Gaps = 106/592 (17%)

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C+PN  +++ L+  LSKS   ++    L EM   G   +K+T T V+   C +   D+A 
Sbjct: 62  CVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKAL 121

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +F ++ D G   ++V ++ L+  F K  +VD+A  L+ + E+        ++  LI G 
Sbjct: 122 DVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGF 180

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD- 342
            +  R D+A   + KM +    PD+ LY V+I GL     VK A+ L S+M+   I PD 
Sbjct: 181 VKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDV 240

Query: 343 --------------------------------TYCYNALIKGFCDLGLLDQARSLQVEIW 370
                                           T  YN+++    D G + +A  L   I 
Sbjct: 241 KIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAIT 300

Query: 371 KRDSL----------------PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             + +                PN+ TF+I+I G+ + G +D A  LF  M + GC P + 
Sbjct: 301 IGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLL 360

Query: 415 MFNALIDGLCKAGELEKANLLFYKME-IGKNPTLFL----------RLSQGGN------- 456
           ++N LIDGLC +  L+++  L  +ME  G  PT F           R    G        
Sbjct: 361 LYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKM 420

Query: 457 RVHDKASL----QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           R+H          ++V++ C  G   +A K L+ +AE G  PDI+ Y++ ++G  K+  +
Sbjct: 421 RIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEV 480

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + ALKLF+++  +G  PD + Y  LI GL +  R  +A  +  +M + G  PS   Y +L
Sbjct: 481 DQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTL 540

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLND 632
           +   C+                      +E+M  +   ++K    N I            
Sbjct: 541 IDGLCKTDHL------------------EEAMLFLSMMIEKEREPNVIT----------- 571

Query: 633 FQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRG 684
                Y+  + GLC  G+  +AL +++ +       +  + +  IHGL   G
Sbjct: 572 -----YSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCG 618



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 38/351 (10%)

Query: 363 RSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-CFPSVGMFNALID 421
           R+L +++     L +      LI  +   G+V +A  LF++++K G C P+   +  L++
Sbjct: 15  RALSMDVVNSRCLMSPGALGFLIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLE 74

Query: 422 GLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAY 481
            L K+  ++   +   +M              G     DK +L  +++ YC      KA 
Sbjct: 75  VLSKSICIDLLEMRLKEMH-----------DHGWG--FDKYTLTPVLQVYCNMAEFDKAL 121

Query: 482 KILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
            +  ++ + G + + + ++ L+  F K G ++ A +L + ++ K +R +  T+ +LI G 
Sbjct: 122 DVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGF 180

Query: 542 QRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDD 601
            +  R + A  +F +M ++G TP  ++Y  ++   C  +    A  L+ + ++    + D
Sbjct: 181 VKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSE-MKGFKIQPD 239

Query: 602 ESM--KSIEEFLQKGEVENAIQGLLE-MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
             +  K I  F ++ E+    + + E MD K +      Y   L  L  +G V +A ++ 
Sbjct: 240 VKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLL---YNSVLNSLVDNGSVHKAYHLL 296

Query: 659 SV--------------LVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVF 693
                           L   KA+V P S     +I+GL K G LDLA+ +F
Sbjct: 297 QAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLF 347


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 244/514 (47%), Gaps = 30/514 (5%)

Query: 116 KALESFGKMK-------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           KAL + G++K       E    PDV  Y  +++          A+ +  EM       N 
Sbjct: 261 KALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V ++ +I  L   G+   A++++++M   G++ +   +T V+SG C+      A   F +
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+  G + D V Y AL+NG C+   + EA  +L+  E  G      +Y+ LIDG  +  +
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA+  + KM ++++ P+VV Y  +  GL + G V  A +LL +M  +G+  + + YN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G C  G L+QA    +++ +    P+ +T+T +I  +C++  +D A  L  +M   G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 409 CFPSVGMFNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P++  +N L++G C +G +E    LL + +E   +P              +  +  ++
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP--------------NTTTYNSL 606

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++QYC    +    +I   +     +P+  TYN LI G CK  N+  AL    E+  KG 
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           R  + +Y  LI  L +  +  +A R+F +M ++  T  P VY   +  S          +
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLA 726

Query: 588 LW-----LQYLRDISGRDD---ESMKSIEEFLQK 613
           L      +  ++ I+  DD   E   SI  FL++
Sbjct: 727 LCDELVEVTLVKSIADTDDDFAEEHISIMRFLEE 760



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 239/536 (44%), Gaps = 57/536 (10%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++  E+ ++    N  +Y I++  LC   R  +A++LF +M      PD V Y  +++
Sbjct: 241 AVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVH 293

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C L  ++ A+ LL      G      +Y+ +I  L    +  +A      M    +  
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D  ++  ++ G    G +  A     +M++RG+  D   Y ALI G C  G L +A  + 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +    +  T+T+LI G C+ G + +A  + NKM +    P+V  + AL DGLCK 
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++  AN L ++M   G    +F              +  +++   C AG + +A + ++
Sbjct: 474 GDVCAANELLHEMCSKGLELNIF--------------TYNSLINGLCKAGNLEQAMRTMI 519

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E+G  PD+ TY ++I   C+   ++ A  L +E+  KG++P  VTY  L+NG     
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R E   R+   M +    P+   Y SLM   C                       +++MK
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC----------------------IEKNMK 617

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
           S  E           +G+L  +   N+     Y I + G C+   +KEAL   S ++E  
Sbjct: 618 STTEI---------YKGMLSQEVVPNENT---YNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
             +T  S   LI  L K+     A  +F    K+     P V N+ +  L F++DN
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI-DLSFNEDN 720



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++VI++L          + ++++    V + + VF  ++SG+ + GD   A   F +M++
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D   Y A++N   R      A  V  EM       + VT+++LI+G  K GK   
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + ++M Q+ + PN  TYT +  GLC+      A  L  +M   G   +   YN+L+N
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   +++A+  +   ++ G  P + +Y+ +I  L ++K  D A++  ++M ++ I+P
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V Y V++ G   +G+V+   +LL  M E+ I P+T  YN+L+K +C    +++     
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC----IEKNMKST 619

Query: 367 VEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            EI+K    ++ +PN +T+ ILI G C+   + +A    ++M + G   +   +NALI  
Sbjct: 620 TEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679

Query: 423 LCKAGELEKANLLFYKM 439
           L K  +  +A  LF KM
Sbjct: 680 LNKKKKFTEARRLFEKM 696



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 165/355 (46%), Gaps = 4/355 (1%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           TTV S   +  +      +F    KR       + +A+I+ L +        + L E+  
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             + V +  + VLI GY KVG   +A     KM +    P+V  Y A+ +   ++     
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + +EM       NI T++ LINGL K+G  E A++ + +M + G+ P+ +TYT +I 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LCQ    D A+ L  +M D G  P  V YN L+NGFC   RV+    LL    +    P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ L+      K        Y+ M  +++ P+   Y ++I+G  +A  +K+A+   
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL---PNTHTFTI 383
           S+M E+G       YNALI+         +AR L  E  ++D L   P+ + F I
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL-FEKMRKDRLTAEPDVYNFYI 712



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 193/435 (44%), Gaps = 43/435 (9%)

Query: 283 LFRAKRYDEAYAWYRKMF---EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           L RA R+   +  + + F    +    D V + +++  L  A        LL  +R+ GI
Sbjct: 170 LVRALRFPSPHRHFVEQFISTYKAFSSDPVSFDLLLLCLPSA-------PLLLRLRQYGI 222

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            P     NA++   C L L D+A  L  E+ ++    NT ++ IL+  +C  G + DA +
Sbjct: 223 SPSPESCNAVL---CRLPL-DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQ 274

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPTLFLRLSQGGN 456
           LF++M      P V  +  ++ G C   ELE A  L  +M    +  NP  +        
Sbjct: 275 LFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY-------- 323

Query: 457 RVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGAL 516
                    +++   C  G +  A +++  +   G + D   + ++++GFC+ G++  A 
Sbjct: 324 --------TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375

Query: 517 KLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWS 576
             F E+Q +GL  D VTY  LINGL R    ++A R+  +M   G       Y  L+   
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGY 435

Query: 577 CRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLEMDFKLNDFQL 635
           C+  K + AF +  + ++     +  +  ++ + L ++G+V  A + L EM  K  +  +
Sbjct: 436 CKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNI 495

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             Y   + GLC+ G +++A+     + E        +   +I  LC+   LD A  +   
Sbjct: 496 FTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQE 555

Query: 696 TLKNGFILRPRVCNY 710
            L  G  ++P +  Y
Sbjct: 556 MLDKG--IKPTIVTY 568



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 11/288 (3%)

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           E  N +  ++ + +   LF  L +      +  S   +++  CTAG I  A+++  ++A 
Sbjct: 227 ESCNAVLCRLPLDEAVQLFQELPE-----KNTCSYNILLKALCTAGRIKDAHQLFDEMAS 281

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
               PD++TY  +++G+C +  +  A+KL  E+  +GL  + V Y ++I  L    +  D
Sbjct: 282 P---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSD 338

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL--RDISGRDDESMKSI 607
           A R+   M  +G     AV+ ++M+  CR+   + A + W   +  R ++         I
Sbjct: 339 AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN-WFDEMQKRGLAADGVTYTALI 397

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
               + GE++ A + L EM+ K  D     YT+ + G C+ G++ EA  + + +V+ +  
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
               +   L  GLCK+G +  A ++       G  L     N L+  L
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 231/478 (48%), Gaps = 31/478 (6%)

Query: 25  LLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRL---RSFASNSAVISMLLKPNGFDL 81
           L PF+S   V  +     NP +GFRF  W   R +L    SF + + +   L K    DL
Sbjct: 67  LNPFISFEVVKKL---DNNPHIGFRF--WEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDL 121

Query: 82  YWQTLDELRSGNVSVVSDVFFVLISGYYKVG--DCEKALESFGKMKEFDCQPDVYIYNAV 139
             Q  + ++S  +S  S +   L+S + + G   C  AL     ++ ++ +    + N++
Sbjct: 122 AGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATAL----LLQSYEVEGCCMVVNSL 177

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGI 199
           LN   +      A+ ++ E ++     +  TF++LI GL   GK E A+++L  M+  G 
Sbjct: 178 LNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGC 237

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMK-DSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           LP+  TY  +I G C+ N   +A  +F  +K  SGCSPD V Y ++++G+CK  ++ EA 
Sbjct: 238 LPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEAS 297

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
            LL    + G  P   +++ L+DG  +A     A     KM      PDVV +  +I G 
Sbjct: 298 VLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGY 357

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
              G+V    +L  +M  RG+ P+ + Y+ LI   C    L +AR L  ++  +D +P  
Sbjct: 358 CRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQP 417

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYK 438
             +  +I G C+ G V++A  +  +MEK  C P    F  LI G C  G + +A  +F+K
Sbjct: 418 FMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477

Query: 439 M-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
           M  IG +P              DK ++ +++     AG+  +AY  L Q+A  G + D
Sbjct: 478 MVAIGCSP--------------DKITVSSLLSCLLKAGMAKEAYH-LNQIAHKGQIND 520



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 196/428 (45%), Gaps = 52/428 (12%)

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
            F  YN L    CK    D A  +    + DG  P       L+       +   A A  
Sbjct: 102 SFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL 161

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
            + +E  +E   ++   ++  L +  +V+DAMKL  +        DT  +N LI+G C +
Sbjct: 162 LQSYE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGV 219

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVGM 415
           G  ++A  L   +     LP+  T+  LI G C++  +  A ++F+ ++ + GC P V  
Sbjct: 220 GKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVT 279

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
           + ++I G CKAG++++A++L   M  +G  PT                +   +V+ Y  A
Sbjct: 280 YTSMISGYCKAGKMQEASVLLDDMLRLGIYPT--------------NVTFNVLVDGYAKA 325

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G +H A +I  ++   G  PD++T+ SLI+G+C+VG +N   +L++E+  +G+ P++ TY
Sbjct: 326 GEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTY 385

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             LIN L + +R   A  + GQ+      P P +Y  +                      
Sbjct: 386 SILINALCKENRLLKARELLGQLASKDIIPQPFMYNPV---------------------- 423

Query: 595 DISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEA 654
                       I+ F + G+V  AI  + EM+ K        +TI +IG C  G++ EA
Sbjct: 424 ------------IDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471

Query: 655 LNIFSVLV 662
           ++IF  +V
Sbjct: 472 VSIFHKMV 479


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/566 (24%), Positives = 266/566 (46%), Gaps = 53/566 (9%)

Query: 86  LDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           +D ++S  V+     +  LIS   +    E+A E F +MK     PD   YNA+L++  +
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGK 338

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
            +    A+ V  EM      P+IVT++ LI+  ++ G  + A+++  +M ++GI P+ FT
Sbjct: 339 SRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFT 398

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN------GFCKLRRV----- 254
           YT ++SG  +  + D A ++F +M+ +GC P+   +NAL+        F ++ +V     
Sbjct: 399 YTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIK 458

Query: 255 ------------------------DEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYD 290
                                    E   + +  ++ GFVP   +++ LI    R   +D
Sbjct: 459 ICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFD 518

Query: 291 EAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALI 350
           +A A YR+M +  + PD+  Y  ++  L+  G  + + K+L++M++    P+   Y +L+
Sbjct: 519 QAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578

Query: 351 KGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCF 410
             + +   +++  +L  EI+     P       L+    ++ ++ + ++ F ++ + G  
Sbjct: 579 HAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFS 638

Query: 411 PSVGMFNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVE 469
           P +   NA++    +   + K N +L +  + G  P+L               +  +++ 
Sbjct: 639 PDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSL--------------TTYNSLMY 684

Query: 470 QYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRP 529
            Y       K+  IL ++   G  PDII++N++I  +C+ G +  A ++F E++  GL P
Sbjct: 685 MYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAP 744

Query: 530 DSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR--RRKFSLAFS 587
           D +TY T I          +A  +   M +NGC P+   Y SL+ W C+  RR  + +F 
Sbjct: 745 DVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFI 804

Query: 588 LWLQYLRDISGRDDESMKSIEEFLQK 613
             L+ L D S   DE  + +E   +K
Sbjct: 805 SNLRNL-DPSVTKDEERRLLERLNKK 829



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 165/661 (24%), Positives = 301/661 (45%), Gaps = 40/661 (6%)

Query: 90  RSGNVSVVSD-VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQL 148
           R    S++S+ V  V+IS   K G    A      ++      D+Y Y +++        
Sbjct: 176 REDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGR 235

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK-MLDEMTQRGILPNKFTYT 207
           +  A+ V+ ++ +  C P ++T+++++N   K G     I  ++D M   G+ P+ +TY 
Sbjct: 236 YREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYN 295

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +IS   + +  +EA  +F +MK +G SPD V YNALL+ + K RR  EA+ +L+  E  
Sbjct: 296 TLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           GF P + +Y+ LI    R    DEA     +M ++ I+PDV  Y  ++ G  + GK   A
Sbjct: 356 GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYA 415

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
           MK+  +MR  G  P+   +NALIK   + G   +   +  EI   + +P+  T+  L+  
Sbjct: 416 MKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAV 475

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPT 446
             +NGM  +   +F +M++AG  P    FN LI    + G  ++A  ++ +M + G  P 
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTP- 534

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
                        D ++   ++      GL  ++ K+L ++ +    P+ +TY SL++ +
Sbjct: 535 -------------DLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
                +     L +E+    + P +V   TL+    + D   +  R F ++ + G +P  
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDI 641

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDE--------SMKSIEEFLQKGEVEN 618
               ++++   RRR  S    + L +++D SG             M S  E  +K   E+
Sbjct: 642 TTLNAMVSIYGRRRMVSKTNEI-LNFIKD-SGFTPSLTTYNSLMYMYSRTEHFEKS--ED 697

Query: 619 AIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---K 675
            ++ ++    K +   +  +   +   C++G++KEA  IF+   E K     P  +    
Sbjct: 698 ILREIIAKGMKPD---IISFNTVIFAYCRNGRMKEASRIFA---EMKDFGLAPDVITYNT 751

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
            I           A+DV  Y +KNG        N L+    F K N++  A   +  +++
Sbjct: 752 FIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID--WFCKLNRRDEASSFISNLRN 809

Query: 736 V 736
           +
Sbjct: 810 L 810



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/481 (20%), Positives = 198/481 (41%), Gaps = 51/481 (10%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           + ++S   K    D   +  +E+R          F  LI  +   G+  + ++ F ++K 
Sbjct: 400 TTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKI 459

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
            +C PD+  +N +L +  +  +      V+ EM +   +P   TF+ LI+  S+ G  + 
Sbjct: 460 CECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQ 519

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+ +   M   G+ P+  TY  V++ L +    +++ ++  +MKD  C P+ + Y +LL+
Sbjct: 520 AMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLH 579

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
            +   + V+   AL          P+      L+    ++    E    + ++ E+   P
Sbjct: 580 AYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSP 639

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D+     M+        V    ++L+ +++ G  P    YN+L+  +      +++  + 
Sbjct: 640 DITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDIL 699

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            EI  +   P+  +F  +I   CRNG + +A ++F +M+  G  P V  +N         
Sbjct: 700 REIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYN--------- 750

Query: 427 GELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
                                                  T +  Y +  +  +A  ++  
Sbjct: 751 ---------------------------------------TFIASYASDSMFIEAIDVVKY 771

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++G  P+  TYNSLI+ FCK+   + A        L+ L P SVT       L+R+++
Sbjct: 772 MIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFIS--NLRNLDP-SVTKDEERRLLERLNK 828

Query: 547 E 547
           +
Sbjct: 829 K 829


>gi|302795027|ref|XP_002979277.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
 gi|300153045|gb|EFJ19685.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
          Length = 570

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 234/484 (48%), Gaps = 70/484 (14%)

Query: 167 NIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLF 226
           ++ +++LL+ G  ++G+   A++++ EM  R + PN+ T+  ++ G CQI R +EA   F
Sbjct: 1   SVASYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHF 60

Query: 227 LKMKD-SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD-GFVPR------------ 272
             + D SG  P    YN L++GFCK+ ++ +A  L      D G++P             
Sbjct: 61  RSVIDTSGVDPAM--YNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLC 118

Query: 273 ---------------------------LGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIE 305
                                      L + + LIDGL RA R DEA     +  ++K  
Sbjct: 119 KAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAM 178

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMR-ERGIVPDTYCYNALIKGFCDLGLLDQARS 364
            + V YG++I+GL ++ +V+D ++LL +M   RG+ PD   YN+++ GFC+L +++QA  
Sbjct: 179 INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALE 238

Query: 365 LQVEIWKRDS-LPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
           L   + + +   P+      L+ G+C++G    A +L  +M++ GC PS  ++  +I+ L
Sbjct: 239 LFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEEL 298

Query: 424 CKAGELEKA-NLLFYKMEIGKNPT-----------LFLRLSQGGNRVHDKASLQT----- 466
           C +GE +KA  LL   +  G+ P            L+        R H K  L +     
Sbjct: 299 CNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAP 358

Query: 467 -------MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
                  +++  C +G   +A   L+ + + G+  +   YNSL+ G CK   +  AL  F
Sbjct: 359 SVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFF 418

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
            E+Q +GL P  VTY  L++G  +V + E+A  +F  M    C P+   YK+L     R 
Sbjct: 419 HEMQDEGL-PSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRS 477

Query: 580 RKFS 583
            K +
Sbjct: 478 GKMA 481



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 232/510 (45%), Gaps = 33/510 (6%)

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS- 263
           +Y +++ G C+     +A RL  +MK    +P+   +  +L GFC++ R++EAL   RS 
Sbjct: 4   SYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFRSV 63

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGLSEAG 322
            +  G  P +  Y+ LIDG  +  +  +A+    +M  +    P  V    ++ GL +AG
Sbjct: 64  IDTSGVDPAM--YNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKAG 121

Query: 323 KVKDAMKLLSDMRERGIVPDTY----CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
               A+KL + M ER     T       NALI G C  G +D+A  L  E  K  ++ N 
Sbjct: 122 SFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDKAMINA 181

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKA-GCFPSVGMFNALIDGLCKAGELEKANLLFY 437
            T+ ILI G+C++  V+D  +L  +M  + G  P    +N+++ G C+   +E+A     
Sbjct: 182 VTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQA----- 236

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
                    LF  ++QG     D   + T+V   C +G   +A ++L ++   G  P   
Sbjct: 237 -------LELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQ 289

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRP-DSVTYGTLINGLQRVDREEDAFR-IFG 555
            Y  +I   C  G  + A KL  E   KG  P ++ TY  +++GL +  R E A R + G
Sbjct: 290 VYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKG 349

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            +  +   PS     +++   C+  +FS A   W  +L  +     ++   I   L  G 
Sbjct: 350 ILSSSLSAPSVVTSCAIIDGLCKSGRFSEA--RW--FLLSMGQMGSKANTHIYNSLLGGL 405

Query: 616 VENAIQG-LLEMDFKLNDFQL---APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
            + A  G  L    ++ D  L     Y I L G C+  +++EA  +F  +V+ K + T  
Sbjct: 406 CKAAKMGEALAFFHEMQDEGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAV 465

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
           +   L  G  + G   +A D      ++GF
Sbjct: 466 TYKTLTEGFTRSG--KMAEDYQFADQRDGF 493



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 219/461 (47%), Gaps = 24/461 (5%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIY----NAVLNIAFRKQLFLLALAVYYE 158
            L++G  K G  +KA++ F +M E   +    +     NA+++   R      AL + +E
Sbjct: 112 TLVAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFE 171

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEM-TQRGILPNKFTYTIVISGLCQIN 217
             K   + N VT+ +LI GL KS + E  +++L+EM T RG+ P+  TY  +++G C+++
Sbjct: 172 GCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELD 231

Query: 218 RADEAYRLFLKM-KDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
             ++A  LF  + + + C+PD V    L+NG CK  R  +AL LL   ++ G  P    Y
Sbjct: 232 MVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVY 291

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEP-DVVLYGVMIRGLSEAGKVKDAMKLLSDMR 335
             +I+ L  +   D+A     +   +   P +   Y +++ GL +  + + A + L  + 
Sbjct: 292 CLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGIL 351

Query: 336 ERGI-VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMV 394
              +  P      A+I G C  G   +AR   + + +  S  NTH +  L+ G+C+   +
Sbjct: 352 SSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKM 411

Query: 395 DDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK---NPTLFLRL 451
            +A   F++M+  G  PSV  +N L+DG CK  ++E+A  +F  M   K       +  L
Sbjct: 412 GEALAFFHEMQDEG-LPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTL 470

Query: 452 SQGGNRVHDKASLQTMVEQY--CTAGL---------IHKAYKILMQLAESGNLPDIITYN 500
           ++G  R    A      +Q      GL         +   ++++  + + G L  ++T N
Sbjct: 471 TEGFTRSGKMAEDYQFADQRDGFPKGLDIILSRLKNLEPGFQVIYMMVDKG-LIKLMTVN 529

Query: 501 SLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
           S+I    K G  + A KL + L  KG  P +V    + +GL
Sbjct: 530 SIIRRLWKAGMGDQADKLAQTLVKKGGIPPAVMRAAVTDGL 570



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 194/419 (46%), Gaps = 26/419 (6%)

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V  Y +++RG  E G+V  A++L+ +M+ R + P+   +  ++KGFC +G +++A     
Sbjct: 2   VASYNLLVRGYCETGEVCKALRLVKEMKARDLAPNETTHGEILKGFCQIGRMEEALEHFR 61

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKM-EKAGCFPSVGMFNALIDGLCKA 426
            +     + +   +  LI G C+   + DA  L  +M    G  PS    N L+ GLCKA
Sbjct: 62  SVIDTSGV-DPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLCKA 120

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G  +KA  LF +M E  K  +  + L          A+   +++  C AG + +A +++ 
Sbjct: 121 GSFDKAVKLFTRMAERTKRNSTMVTL----------AAANALIDGLCRAGRVDEALELVF 170

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL-KGLRPDSVTYGTLINGLQRV 544
           +  +   + + +TY  LI G CK   +   L+L +E+   +GL PD+ TY +++ G   +
Sbjct: 171 EGCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCEL 230

Query: 545 DREEDAFRIFGQMPQ-NGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDES 603
           D  E A  +F  + Q N C P P +  +L+   C+  +   A  L L+ +  +  +    
Sbjct: 231 DMVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALEL-LEEMDRVGCQPSSQ 289

Query: 604 MKS--IEEFLQKGEVENAIQGLLEMDFK-LNDFQLAPYTIWLIGLCQDGQVKEAL----N 656
           +    IEE    GE + A + L E   K         YT+ + GL +  + ++A      
Sbjct: 290 VYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKG 349

Query: 657 IFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
           I S  +   ++VT  SC  +I GLCK G    A    L   + G      + N LL  L
Sbjct: 350 ILSSSLSAPSVVT--SCA-IIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGL 405


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 236/484 (48%), Gaps = 37/484 (7%)

Query: 123 KMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL--NCLPNIVTFSLLINGLSK 180
           +M E  C PDV+ Y+ +L     ++    A  + + M +   NC P++V++S +I+G  K
Sbjct: 74  RMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFK 133

Query: 181 SGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVA 240
            G    A  +  +M   GI PN  T   VI GLC++   D+A  +  +M D    P+   
Sbjct: 134 EGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTT 193

Query: 241 YNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMF 300
           YN+L++G+    +  EA+ +L+   +DG  P + +Y+ LID L ++  + EA   +  M 
Sbjct: 194 YNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMI 253

Query: 301 EEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +   +PD   YG ++ G +  G + +   +   M + G+  + + ++  I  +C  G LD
Sbjct: 254 QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLD 313

Query: 361 QARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALI 420
           +A    +++ +   +P+  T+T +I G+C+ G +DDA   F +M   G  P++  F  LI
Sbjct: 314 EASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373

Query: 421 DGLCKAGELEKANLLFYK-MEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHK 479
            G    G+ EKA  LFY+ M+ G  P              D      M+++    G + +
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIPP--------------DVTIFTAMIDRLFKEGKVTE 419

Query: 480 AYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLIN 539
           A K+   +  +G  P++++YN++I+G+   G +   +KL  ++ L GL+P +VT+ TL++
Sbjct: 420 AQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 479

Query: 540 GLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGR 599
           G                M   G  P     K+L+   C   +     +L+    R++ G+
Sbjct: 480 G----------------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLF----REMLGK 519

Query: 600 DDES 603
            D++
Sbjct: 520 ADKT 523



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 246/519 (47%), Gaps = 42/519 (8%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           P+I TF +LI+    +G   +    L ++ + G+  +   +T ++  LC   R  +A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 226 FLK-MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG--FVPRLGSYSCLIDG 282
            L+ M + GC+PD  +Y+ LL G C  ++ +EA  L+    +DG    P + SYS +I G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 283 LFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD 342
            F+     +AY  + KM +  I P+VV    +I GL +   +  A  +L  M +  I+P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 343 TYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFN 402
              YN+LI G+   G   +A  +  E+ +    PN  T+ +LI  +C++G   +A+++FN
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 403 KMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
            M ++G  P    + +L+ G    G L           +  N    L +  G    H   
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNL-----------VEMNNVKDLMVQNGMRSNHHTF 299

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           S++  +  YC  G + +A    +++ + G +PDI+TY ++I+G CK+G ++ A+  F ++
Sbjct: 300 SIE--IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
              GL P+ +T+ TLI+G     + E A  +F +M   G  P   ++ +++    +  K 
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKV 417

Query: 583 SLAFSLWLQYLRD-----------------ISGRDDESMKSIEEFLQKGEVENAI----- 620
           + A  L+    R                  I+G   E MK +++ L  G    A+     
Sbjct: 418 TEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTL 477

Query: 621 -QGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIF 658
             G++ M  K +   +      +   C+DG++++ L +F
Sbjct: 478 LDGMVSMGLKPD---VDTCKTLIDSCCEDGRIEDILTLF 513



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 208/434 (47%), Gaps = 31/434 (7%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  +I G++K GD  KA   F KM +    P+V   N+V++   + Q    A AV  +M+
Sbjct: 124 YSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
             + +PN  T++ LI+G   SG+   A+++L EM++ G  PN  TY ++I  LC+     
Sbjct: 184 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHA 243

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  +F  M  SG  PD   Y +LL+G+     + E   +     ++G      ++S  I
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEI 303

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
               +  R DEA   + KM +    PD+V Y  +I GL + G++ DAM     M + G+ 
Sbjct: 304 YAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLS 363

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   +  LI GF   G  ++A  L  E+  R   P+   FT +I  + + G V +AQKL
Sbjct: 364 PNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKL 423

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           F+ M +AG  P+V  +N +I G   AGE+ E   LL   + IG  PT             
Sbjct: 424 FDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT------------- 470

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              +  T+++   + GL                 PD+ T  +LI+  C+ G I   L LF
Sbjct: 471 -AVTFNTLLDGMVSMGL----------------KPDVDTCKTLIDSCCEDGRIEDILTLF 513

Query: 520 KELQLKGLRPDSVT 533
           +E+  K  + D++T
Sbjct: 514 REMLGKADKTDTIT 527



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 223/491 (45%), Gaps = 60/491 (12%)

Query: 197 RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDE 256
           + + P+  T+ I+IS  C     +  +    ++  +G   D VA+  LL   C  +R  +
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 257 ALAL-LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE--KIEPDVVLYGV 313
           A+ + LR   + G  P + SYS L+ GL   K+ +EA      M E+     PDVV Y  
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I G  + G V  A  L   M + GI P+    N++I G C +  +D+A ++  ++    
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
            +PN  T+  LI G   +G   +A ++  +M + G  P+V  +N LID LCK+G   +A 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +F  M + G  P              D  +  +++  Y T G + +   +   + ++G 
Sbjct: 247 EIFNSMIQSGPKP--------------DATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM 292

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             +  T++  I  +CK G ++ A   F ++Q  G  PD VTY T+I+GL ++ R +DA  
Sbjct: 293 RSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMS 352

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQ 612
            F QM  +G +P+   + +L+            FS++ ++                   +
Sbjct: 353 RFCQMIDDGLSPNIITFTTLIH----------GFSMYGKW-------------------E 383

Query: 613 KGEVENAIQGLLEMDFKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIV 668
           K E         E+ +++ D  + P    +T  +  L ++G+V EA  +F ++    A  
Sbjct: 384 KAE---------ELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKP 434

Query: 669 TPPSCVKLIHG 679
              S   +IHG
Sbjct: 435 NVVSYNTMIHG 445



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 166/373 (44%), Gaps = 16/373 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++VI  L K    D     L ++   ++      +  LI GY   G   +A+    +M  
Sbjct: 160 NSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSR 219

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +P+V  YN +++   +      A  ++  M++    P+  T+  L++G +  G    
Sbjct: 220 DGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVE 279

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
              + D M Q G+  N  T++I I   C+  R DEA   F+KM+  G  PD V Y  +++
Sbjct: 280 MNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVID 339

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK+ R+D+A++       DG  P + +++ LI G     ++++A   + +M +  I P
Sbjct: 340 GLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPP 399

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           DV ++  MI  L + GKV +A KL   M   G  P+   YN +I G+   G + +   L 
Sbjct: 400 DVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLL 459

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            ++      P   TF  L+ GM   G+                 P V     LID  C+ 
Sbjct: 460 DDMLLIGLKPTAVTFNTLLDGMVSMGLK----------------PDVDTCKTLIDSCCED 503

Query: 427 GELEKANLLFYKM 439
           G +E    LF +M
Sbjct: 504 GRIEDILTLFREM 516



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 184/410 (44%), Gaps = 29/410 (7%)

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
           +K+ PD+  +G++I    +AG +      L  + + G+  D   +  L++  C       
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 362 ARSLQVE-IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG--CFPSVGMFNA 418
           A ++ +  + +    P+  +++ L+ G+C     ++A +L + M + G  C P V  ++ 
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 419 LIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
           +I G  K G++ KA  LF KM + G  P +               +  ++++  C    +
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNV--------------VTCNSVIDGLCKVQAM 172

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            KA  +L Q+ +   +P+  TYNSLI+G+   G    A+++ KE+   G RP+ VTY  L
Sbjct: 173 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNML 232

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDI- 596
           I+ L +     +A  IF  M Q+G  P    Y SL+              + +  ++D+ 
Sbjct: 233 IDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNL-----VEMNNVKDLM 287

Query: 597 ---SGRDDESMKSIE--EFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQV 651
                R +    SIE   + + G ++ A    ++M        +  YT  + GLC+ G++
Sbjct: 288 VQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRL 347

Query: 652 KEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGF 701
            +A++ F  +++        +   LIHG    G  + A ++F   +  G 
Sbjct: 348 DDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGI 397



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 156/374 (41%), Gaps = 54/374 (14%)

Query: 376 PNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NL 434
           P+  TF ILI   C  G ++       ++ K G       F  L+  LC       A N+
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 435 LFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN- 492
           +  +M E+G  P +F              S  T+++  C      +A +++  +AE G+ 
Sbjct: 71  VLRRMPELGCTPDVF--------------SYSTLLKGLCAEKKCEEAAELIHMMAEDGDN 116

Query: 493 -LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAF 551
             PD+++Y+++I+GF K G++  A  LF ++   G+ P+ VT  ++I+GL +V   + A 
Sbjct: 117 CPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 176

Query: 552 RIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL 611
            +  QM      P+   Y SL+                  YL   SG+  E+++ ++E  
Sbjct: 177 AVLQQMIDEHIMPNCTTYNSLIHG----------------YLS--SGQWTEAVRILKEMS 218

Query: 612 QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPP 671
           + G+  N +                 Y + +  LC+ G   EA  IF+ +++        
Sbjct: 219 RDGQRPNVVT----------------YNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDAT 262

Query: 672 SCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLC 731
           +   L+HG    G L    +V    ++NG  +R     + +    + K  +   A     
Sbjct: 263 TYGSLLHGYATEGNLVEMNNVKDLMVQNG--MRSNHHTFSIEIYAYCKCGRLDEASLTFI 320

Query: 732 RMKSVGYDLDACLY 745
           +M+ +G+  D   Y
Sbjct: 321 KMQQLGFMPDIVTY 334


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 173/341 (50%), Gaps = 19/341 (5%)

Query: 200 LPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALA 259
           +P   TY  +ISGLC+  RA EAY L  +M  SGC PD   Y  L+ GFCK ++ D+AL 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 260 LLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIEPDVVLYGVMIRGL 318
           +       GF P + +YSCLIDGL +  R  EA   + +M +     P+ V Y  +I G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
              GK+ +AM LL  M E G  PD   Y  L+ GFC L  LD A  L  ++ ++   PN 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFY 437
            TFT L+ G+CR   + DA  +  +M +  C P+V  +N ++DG C+  +LE+A   +  
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           +M+   N                  S   M+   C      +A +++ +       PD++
Sbjct: 291 EMDCPPN----------------VVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334

Query: 498 TYNSLINGFCKVGNINGALKLFKE-LQLKGLRPDSVTYGTL 537
            Y ++I+  C+   ++ A +++++ L+  G  P+S+TY T 
Sbjct: 335 MYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 179/310 (57%), Gaps = 3/310 (0%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           P    YN++++   + +    A  +  EMV   C+P+I T++ LI G  KS K++ A+++
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNGFC 249
            +++  RG  P+  TY+ +I GLC+  R  EA  LF +M  SG C P+ V YN+L++GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 250 KLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVV 309
           ++ ++DEA+ LL    + G  P + +Y+ L++G  +  R D+AY    +M  + + P+VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 310 LYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEI 369
            +  ++ GL    ++ DA+ +L +MR +   P  Y YN ++ G+C +  L++AR   +E 
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE- 290

Query: 370 WKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGEL 429
            + D  PN  +F I+I G+C+     +A +L  +  +  C P V M+  +ID LC+  ++
Sbjct: 291 -EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 430 EKANLLFYKM 439
           ++A  ++ KM
Sbjct: 350 DEACRVYRKM 359



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 190/350 (54%), Gaps = 19/350 (5%)

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           ++D+   P  V YN+L++G CK  R  EA  LL      G +P + +Y+ LI G  ++K+
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG-IVPDTYCYN 347
            D+A   + ++      PDVV Y  +I GL + G++K+A+ L   M + G  +P+T  YN
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 348 ALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKA 407
           +LI GFC +G +D+A +L   + +  S P+  T+T L+ G C+   +DDA  L N+M + 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTLFLRLSQGGNRVHDKASLQT 466
           G  P+V  F +L+DGLC+   L  A  +  +M     +PT++              +  T
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVY--------------TYNT 270

Query: 467 MVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKG 526
           +++ YC    + +A K +++  E    P+++++N +I G CKV   + A++L +E + + 
Sbjct: 271 ILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 328

Query: 527 LRPDSVTYGTLINGLQRVDREEDAFRIFGQM-PQNGCTPSPAVYKSLMTW 575
             PD V Y T+I+ L R  + ++A R++ +M  + GC P+   Y +   W
Sbjct: 329 CNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDYW 378



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 175/340 (51%), Gaps = 45/340 (13%)

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
           VP    YN+LI G C      +A  L  E+     +P+  T+T LI G C++   DDA +
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVH 459
           +F ++   G  P V  ++ LIDGLCK G L++A              LF R+ + G+ + 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA------------IDLFGRMIKSGSCMP 158

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           +  +  +++  +C  G + +A  +L ++AE+G+ PD++TY +L+NGFCK+  ++ A  L 
Sbjct: 159 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 218

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR- 578
            ++  KGL P+ VT+ +L++GL R +R  DA  I G+M +  C+P+   Y +++   CR 
Sbjct: 219 NQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRV 278

Query: 579 -----RRKFSL----------AFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGL 623
                 RKF L          +F++ ++ L  ++ R  E+M+ +EE  ++    + +   
Sbjct: 279 NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN-RSSEAMELVEEARRRRCNPDVVM-- 335

Query: 624 LEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVE 663
                         YT  +  LC++ +V EA  ++  ++E
Sbjct: 336 --------------YTTVIDVLCREKKVDEACRVYRKMLE 361



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 157/328 (47%), Gaps = 18/328 (5%)

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
           VP   +Y+ LI GL +A+R  EAY    +M      PD+  Y  +I G  ++ K  DA++
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS-LPNTHTFTILICGM 388
           +   +  RG  PD   Y+ LI G C  G L +A  L   + K  S +PNT T+  LI G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           CR G +D+A  L  +M + G  P V  +  L++G CK   L+ A  L  +M   G  P +
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          +  ++++  C    +  A  IL ++      P + TYN++++G+C
Sbjct: 231 --------------VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC 276

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           +V  +  A K    L+     P+ V++  +I GL +V+R  +A  +  +  +  C P   
Sbjct: 277 RVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRD 595
           +Y +++   CR +K   A  ++ + L +
Sbjct: 335 MYTTVIDVLCREKKVDEACRVYRKMLEE 362



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 177/325 (54%), Gaps = 14/325 (4%)

Query: 67  SAVISMLLKPNGFDLYWQTLDEL-RSGNVSVVSDVFF--VLISGYYKVGDCEKALESFGK 123
           +++IS L K       +  L+E+  SG    + D+F    LI+G+ K    + AL  F +
Sbjct: 58  NSLISGLCKAERASEAYDLLEEMVYSG---CIPDIFTYTTLITGFCKSKKSDDALRVFEQ 114

Query: 124 MKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL-NCLPNIVTFSLLINGLSKSG 182
           +     +PDV  Y+ +++   ++     A+ ++  M+K  +C+PN VT++ LI+G  + G
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 174

Query: 183 KTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYN 242
           K + A+ +L+ M + G  P+  TYT +++G C++ R D+AY L  +M   G +P+ V + 
Sbjct: 175 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFT 234

Query: 243 ALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
           +L++G C+  R+ +A+ +L    +    P + +Y+ ++DG  R  + +EA    RK   E
Sbjct: 235 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA----RKFMLE 290

Query: 303 KIE--PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
           +++  P+VV + +MIRGL +  +  +AM+L+ + R R   PD   Y  +I   C    +D
Sbjct: 291 EMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVD 350

Query: 361 QA-RSLQVEIWKRDSLPNTHTFTIL 384
           +A R  +  + +   LPN+ T++  
Sbjct: 351 EACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKP----NGFDLYWQTLD 87
           TT+ +   K+K      R F     R       + S +I  L K        DL+ + + 
Sbjct: 93  TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI- 151

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
             +SG+    +  +  LISG+ ++G  ++A+    +M E    PDV  Y  ++N   +  
Sbjct: 152 --KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLA 209

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               A  +  +M +    PN+VTF+ L++GL +  +   A+ +L EM ++   P  +TY 
Sbjct: 210 RLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYN 269

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            ++ G C++N+ +EA +  L+  D  C P+ V++N ++ G CK+ R  EA+ L+    + 
Sbjct: 270 TILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRR 327

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE 302
              P +  Y+ +ID L R K+ DEA   YRKM EE
Sbjct: 328 RCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
           Q    V    +  +++   C A    +AY +L ++  SG +PDI TY +LI GFCK    
Sbjct: 46  QDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 105

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNG-CTPSPAVYKS 571
           + AL++F++L  +G RPD VTY  LI+GL +  R ++A  +FG+M ++G C P+   Y S
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEVENAIQGLLEMDFKL 630
           L++  CR  K   A +L  +     S  D  +  ++   F +   +++A   L +M  K 
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAM 690
               +  +T  + GLC++ ++ +A++I   +       T  +   ++ G C+   L+ A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 691 DVFL 694
              L
Sbjct: 286 KFML 289



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 35/248 (14%)

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           + ++  +P  +TYNSLI+G CK    + A  L +E+   G  PD  TY TLI G  +  +
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            +DA R+F Q+   G  P    Y  L+   C+  +   A  L+ + ++  S         
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSC-------- 156

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                    + N +                 Y   + G C+ G++ EA+N+   + E  +
Sbjct: 157 ---------MPNTVT----------------YNSLISGFCRMGKMDEAMNLLERMAETGS 191

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
                +   L++G CK   LD A D+     + G  L P V  +        ++N+   A
Sbjct: 192 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG--LTPNVVTFTSLMDGLCRENRLSDA 249

Query: 727 YHLLCRMK 734
            H+L  M+
Sbjct: 250 VHILGEMR 257


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 237/494 (47%), Gaps = 55/494 (11%)

Query: 121 FGKMKEFDCQPDVYIYNAVLNI----AFRKQLFLLALAVYYEMVKLNC-LPNIVTFSLLI 175
           F ++K+    P+V+ Y  ++N     +F K + ++      E +++N   P +VT+   I
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYI 295

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           +GL ++G  E A++++ ++  R    N + Y  VI   C+     EA+ L   M+  G S
Sbjct: 296 HGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGIS 355

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P   +Y+ L++G CK  +V++AL L+    +    P L +YS L DGL ++   + + + 
Sbjct: 356 PTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSM 415

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
           +  +  E  + DV+ Y  +I G      +  A KL+ +MR  G VP+++ +N LI GFC 
Sbjct: 416 FHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCK 475

Query: 356 LGLLDQARS---------LQVEI----------------WKRDSL----------PNTHT 380
              LD+A           +Q+ I                W+   L          PN++T
Sbjct: 476 RQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYT 535

Query: 381 FTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM- 439
           + I+I  +C+    + A ++   M K   FP    +N LIDG  K     KA LL+ KM 
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 440 EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITY 499
           ++G  P++               +   ++  +     + +AY +  ++ + G +PD I +
Sbjct: 596 KVGIPPSI--------------VTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIF 641

Query: 500 NSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQ 559
             +I GFCKVG++  A  L++E+   G  P+ VTY  LI+G  ++ R + A  +F +M +
Sbjct: 642 TCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKR 701

Query: 560 NGCTPSPAVYKSLM 573
           +  TP    Y +L+
Sbjct: 702 DNVTPDGLTYTALI 715



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 236/489 (48%), Gaps = 13/489 (2%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + L+E+     S     +   I G  + G  E AL     ++  +   + Y YNAV++  
Sbjct: 274 EVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEF 333

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            R      A  +  +M      P   ++S+LI+GL K G+ E A+ +++EM Q  + P+ 
Sbjct: 334 CRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSL 393

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TY+ +  GLC+    + +  +F  +   G   D ++YN L+NGF   R +  A  L+  
Sbjct: 394 VTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHE 453

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              +G VP   +++ LI G  + +R D+A   +  M +  ++ ++    +M    +  G 
Sbjct: 454 MRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGH 513

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
             +A+KL++++++ GIVP++Y YN +IK  C     ++A  +   + K +  P    +  
Sbjct: 514 FWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNT 573

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           LI G  +      A  L+ KM K G  PS+  +  LI+      ++++A  LF +M    
Sbjct: 574 LIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM---- 629

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                  + +G   V D+     ++  +C  G +  A+ +  ++++ G  P+++TY  LI
Sbjct: 630 -------IKKG--LVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLI 680

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCT 563
           +G+ K+  ++ A  LF +++   + PD +TY  LI G Q +   +    +F +M +NG  
Sbjct: 681 DGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVF 740

Query: 564 PSPAVYKSL 572
           P+   Y +L
Sbjct: 741 PNYTAYATL 749



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 228/485 (47%), Gaps = 18/485 (3%)

Query: 68  AVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEF 127
           A I  L +    +   + + +LR  N  + S  +  +I  + + G+  +A E    M+  
Sbjct: 293 AYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSH 352

Query: 128 DCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
              P  Y Y+ +++   +K     AL +  EMV+ N  P++VT+S L +GL KSG TE++
Sbjct: 353 GISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEIS 412

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           + M   +   G   +  +Y  +I+G         A +L  +M+ +G  P+   +N L++G
Sbjct: 413 LSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHG 472

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FCK +R+D+AL +     K G    + + + + D   R   + EA     ++ +  I P+
Sbjct: 473 FCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPN 532

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
              Y ++I+ L +  K + A ++L  M +  + P    YN LI G+       +A  L  
Sbjct: 533 SYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYA 592

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           ++ K    P+  T+T+LI        + +A  LF +M K G  P   +F  +I G CK G
Sbjct: 593 KMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVG 652

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
           +++ A  L+ +M + GK+P +               +   +++ Y     + KA  +  +
Sbjct: 653 DMKSAWALYEEMSQWGKSPNV--------------VTYTCLIDGYFKIKRMDKADFLFNK 698

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQ-RVD 545
           +      PD +TY +LI G+  +G  +   ++F E++  G+ P+   Y TL  GL   V 
Sbjct: 699 MKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL--GLHLGVV 756

Query: 546 REEDA 550
           REE A
Sbjct: 757 REEPA 761



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 211/447 (47%), Gaps = 14/447 (3%)

Query: 56  KRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCE 115
           + + L S+  N AVI    +       ++ L+++RS  +S  +  + +LI G  K G  E
Sbjct: 317 RNQPLNSYCYN-AVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVE 375

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           KAL+   +M + + +P +  Y+++ +   +  L  ++L++++ +       ++++++ LI
Sbjct: 376 KALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLI 435

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
           NG         A K++ EM   G +PN FT+  +I G C+  R D+A  +F  M   G  
Sbjct: 436 NGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQ 495

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
            +    N + + F +     EAL L+   +  G VP   +Y+ +I  L + ++ ++A+  
Sbjct: 496 LNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEV 555

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
              M +  + P  + Y  +I G ++      A+ L + M + GI P    Y  LI  F +
Sbjct: 556 LPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSN 615

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
              + +A  L  E+ K+  +P+   FT +I G C+ G +  A  L+ +M + G  P+V  
Sbjct: 616 RSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVT 675

Query: 416 FNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAG 475
           +  LIDG  K   ++KA+ LF KM             +  N   D  +   ++  Y + G
Sbjct: 676 YTCLIDGYFKIKRMDKADFLFNKM-------------KRDNVTPDGLTYTALIFGYQSLG 722

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSL 502
              +  ++  ++ E+G  P+   Y +L
Sbjct: 723 YSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 204/473 (43%), Gaps = 42/473 (8%)

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +++  V+I+  +E   + DA  +    R  G+  +    N L+  F +    +  RSL 
Sbjct: 177 SIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLF 236

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGM-----VDDAQKLFNKMEKAGCFPSVGMFNALID 421
            E+      PN  T+TI++   C+        +  A ++  +ME  G  P+V  + A I 
Sbjct: 237 EELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIH 296

Query: 422 GLCKAGELEKANLLFYKMEIGKNP-------TLFLRLSQGGN-----------RVHDKA- 462
           GLC+AG +E A  L   + I   P        +     + G            R H  + 
Sbjct: 297 GLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISP 356

Query: 463 ---SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
              S   +++  C  G + KA  ++ ++ +S   P ++TY+SL +G CK G    +L +F
Sbjct: 357 TAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMF 416

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRR 579
             L  +G + D ++Y TLING         A ++  +M  NG  P+   +  L+   C+R
Sbjct: 417 HNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKR 476

Query: 580 RKFSLA---FSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLA 636
           ++   A   F++ L+    ++      M   +EF ++G    A++ + E    + D  + 
Sbjct: 477 QRLDKALEVFTIMLKVGVQLNIFTCNIMA--DEFNREGHFWEALKLINE----VQDLGIV 530

Query: 637 P----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           P    Y I +  LC++ + ++A  +  V+++            LI G  K+     A+ +
Sbjct: 531 PNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLL 590

Query: 693 FLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           +   LK G  + P +  Y +   +FS  +K   AY+L   M   G   D  ++
Sbjct: 591 YAKMLKVG--IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIF 641


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 239/532 (44%), Gaps = 59/532 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F ++++ Y + GD   A  +F  M+    +P  ++Y ++++     +    AL+   +M 
Sbjct: 271 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 330

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+L+ G +K    E A     E  +R    N   Y  +I   CQ     
Sbjct: 331 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 390

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M++ G       Y+ +++G+  +   ++ L +    ++ GF P + SY CLI
Sbjct: 391 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 450

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    + M    I+ ++  Y ++I G        +A  +  D+ + G+ 
Sbjct: 451 NLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLK 510

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I+ FC +G +D+A     E+ K    P T TF  +I G  R+G +  A ++
Sbjct: 511 PDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 570

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M  +GC P+V  FNALI GL +  ++EKA  +  +M                     
Sbjct: 571 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 630

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA----------------- 480
             + GK    F +L   G  + D  + + +++  C +G +  A                 
Sbjct: 631 LGDTGKAFEYFTKLKTEGLEL-DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 689

Query: 481 -YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            Y IL+                 Q+ + G  PDI TY S IN  CK G++  A K  +E+
Sbjct: 690 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM 749

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           ++ G++P+  TY TLI+G  R    E A + F +M   G  P  AVY  LMT
Sbjct: 750 EVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 801



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 187/417 (44%), Gaps = 15/417 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +    D++  ++ GY  +G+ EK L  F ++KE    P V  Y  ++N+  +  
Sbjct: 398 EMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIG 457

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M       N+ T+S+LING  +      A  + +++ + G+ P+   Y 
Sbjct: 458 KVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYN 517

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I   C +   D A R   +M+     P    +  +++GF +   +  AL +       
Sbjct: 518 NIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS 577

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +++ LI GL    + ++A     +M    I P+   Y  ++ G +  G    A
Sbjct: 578 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 637

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + ++  G+  D Y Y AL+K  C  G +  A ++  E+  +    NT  + ILI G
Sbjct: 638 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 697

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPT 446
             R G V +A +L  +M++ G  P +  + + I+  CKAG++++A     +ME +G  P 
Sbjct: 698 WARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPN 757

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
           +               +  T++  +  A L  KA K   ++  +G  PD   Y+ L+
Sbjct: 758 I--------------KTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 35/320 (10%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I  +  +G+ ++A+ +  +M++   +P    +  +++   R      AL ++  M    
Sbjct: 519 IIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSG 578

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
           C+P + TF+ LI GL +  + E A+++LDEM+  GI PN+ TYT ++ G   +    +A+
Sbjct: 579 CIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAF 638

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
             F K+K  G   D   Y ALL   CK  R+  ALA+ R             Y+ LIDG 
Sbjct: 639 EYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGW 698

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R     EA    ++M +E ++PD+  Y   I    +AG ++ A K + +M   G+ P+ 
Sbjct: 699 ARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNI 758

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  LI G                 W R SLP                  + A K F +
Sbjct: 759 KTYTTLIHG-----------------WARASLP------------------EKALKCFQE 783

Query: 404 MEKAGCFPSVGMFNALIDGL 423
           M+ AG  P   +++ L+  L
Sbjct: 784 MKSAGLKPDKAVYHCLMTSL 803



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 111/556 (19%), Positives = 228/556 (41%), Gaps = 57/556 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P++  + ++++   +      A   F  M+  G  P    Y +L++ +   R ++EAL+ 
Sbjct: 266 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 325

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +R  +++G    L +YS L+ G  +    + A  W+++  E     + ++YG +I    +
Sbjct: 326 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 385

Query: 321 AGKVKDAMKLLSDMRERGI-----------------------------------VPDTYC 345
           A  +  A  L+ +M E GI                                    P    
Sbjct: 386 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 445

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI  +  +G + +A  +   +       N  T+++LI G  R     +A  +F  + 
Sbjct: 446 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 505

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASL 464
           K G  P V ++N +I   C  G +++A     +M+  ++ PT                + 
Sbjct: 506 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTT--------------RTF 551

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  +  +G + +A +I   +  SG +P + T+N+LI G  +   +  A+++  E+ L
Sbjct: 552 MPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSL 611

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+ P+  TY T+++G   +     AF  F ++   G       Y++L+   C+  +   
Sbjct: 612 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQS 671

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           A ++  +       R+       I+ + ++G+V  A + + +M  +     +  YT ++ 
Sbjct: 672 ALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFIN 731

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNG 700
             C+ G ++ A      + E + +   P+      LIHG  +    + A+  F      G
Sbjct: 732 ACCKAGDMQRAT---KTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 788

Query: 701 FILRPRVCNYLLRSLL 716
                 V + L+ SLL
Sbjct: 789 LKPDKAVYHCLMTSLL 804



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 141/329 (42%), Gaps = 15/329 (4%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+    +S     +  ++ GY  +GD  KA E F K+K    + DVY Y A+L   
Sbjct: 604 EILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKAC 663

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      ALAV  EM       N   +++LI+G ++ G    A +++ +M Q G+ P+ 
Sbjct: 664 CKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDI 723

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT  I+  C+      A +   +M+  G  P+   Y  L++G+ +    ++AL   + 
Sbjct: 724 HTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQE 783

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY------RKMFEEKIEPDVVLYGVMIRG 317
            +  G  P    Y CL+  L       E Y +       R+M E ++  D+   G  +  
Sbjct: 784 MKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDM---GTAVHW 840

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS---LQVEIWKRDS 374
                K++     L++  ++   PD   YN  +    +L  +D A S   L   ++K   
Sbjct: 841 SKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNSDDELD-VDDAYSGGFLSPNLYKVSM 899

Query: 375 LPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             N   F +   G    G+V  A   FNK
Sbjct: 900 SNNKENFNVAYLGSSLPGVV--AGNNFNK 926



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/448 (21%), Positives = 186/448 (41%), Gaps = 49/448 (10%)

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           + FE   +P    +G+M+   +  G +  A      MR RGI P ++ Y +LI  +    
Sbjct: 258 QAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGR 317

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A S   ++ +     +  T++IL+ G  +    + A   F + ++     +  ++ 
Sbjct: 318 DMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYG 377

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            +I   C+A  + +A  L  +ME            +G +   D     TM++ Y   G  
Sbjct: 378 NIIYAHCQACNMTQAEALVREME-----------EEGIDAPID--IYHTMMDGYTIIGNE 424

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            K   +  +L E G  P +I+Y  LIN + K+G ++ AL++ K +++ G++ +  TY  L
Sbjct: 425 EKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSML 484

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ING  R+    +AF +F  + ++G  P   +Y ++                         
Sbjct: 485 INGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI------------------------- 519

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                    I  F   G ++ AI+ + EM  + +      +   + G  + G ++ AL I
Sbjct: 520 ---------IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 570

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F ++     I T  +   LI GL ++  ++ A+++       G          ++     
Sbjct: 571 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 630

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             D  K  A+    ++K+ G +LD   Y
Sbjct: 631 LGDTGK--AFEYFTKLKTEGLELDVYTY 656


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 254/570 (44%), Gaps = 51/570 (8%)

Query: 188 IKMLDEMTQ-RGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           I   DE+ +  G   N   Y+ ++  L +++    AY  + +M+  G     + Y  ++N
Sbjct: 144 ISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVN 203

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEE-KIE 305
             CK    + A   +    K GF+      + L+ G  R     +A   +  M  E    
Sbjct: 204 ALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCA 263

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           P+ V Y ++I GL E G++++A  L   M E+G  P T  Y  LIK  CD GL+D+A +L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
             E+  R   PN HT+T+LI G+CR+G +++A  +  KM K G FPSV  +NALI+G CK
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            G +  A  L   ME         R  +   R  ++     ++E  C  G  +KA  +L 
Sbjct: 384 DGRVVPAFELLTVME--------KRACKPNVRTFNE-----LMEGLCRVGKPYKAVHLLK 430

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
           ++ ++G  PDI++YN LI+G C+ G++N A KL   +    L PD +T+  +IN   +  
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQG 490

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           + + A    G M + G +       +L+   C   K   A  +    ++        S+ 
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLN 550

Query: 606 SIEEFLQKG-----------------------EVENAIQGLLEMDFKLNDFQLA------ 636
            I + L KG                            + GL+        F++       
Sbjct: 551 VILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLS 610

Query: 637 -------PYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLA 689
                  PYTI + GLCQ G+V+EA  + S + +        +   ++ G    G LD A
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRA 670

Query: 690 MDVFLYTLKNGFILRPRVCNYLLRSLLFSK 719
           ++     ++ G+ L  R+ + LLR  + S+
Sbjct: 671 LETVRAMVERGYELNDRIYSSLLRGFVLSQ 700



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 35/541 (6%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           R G  +  S  + +LI G  +VG  E+A     +M E  CQP    Y  ++     + L 
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A  ++ EM+   C PN+ T+++LI+GL + GK E A  +  +M + GI P+  TY  +
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I+G C+  R   A+ L   M+   C P+   +N L+ G C++ +  +A+ LL+    +G 
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMK 329
            P + SY+ LIDGL R    + AY     M    +EPD + +  +I    + GK   A  
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA 497

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
            L  M  +GI  D      LI G C++G    A  +   + K   L   H+  +++  + 
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLS 557

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLF 448
           +   + +   +  K+ K G  PSV  +  L+DGL ++G++  +  +   M++ G  P ++
Sbjct: 558 KGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVY 617

Query: 449 LRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCK 508
                             ++   C  G + +A K+L  + +SG  P+ +TY  ++ G+  
Sbjct: 618 --------------PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 509 VGNINGALKLFKELQLKGLRPDSVTYGTLINGL---QRVDREEDAFRIFGQMPQNGCTPS 565
            G ++ AL+  + +  +G   +   Y +L+ G    Q+  RE D                
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETD---------------- 707

Query: 566 PAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLL 624
           P   K L++   +    +    ++L       GR DES   ++  L+ G  +E AI  ++
Sbjct: 708 PECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIM 767

Query: 625 E 625
           E
Sbjct: 768 E 768



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 193/745 (25%), Positives = 318/745 (42%), Gaps = 98/745 (13%)

Query: 21  ALEPLLPFLSKTTVTSVI-MKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGF 79
           +L+ L+  +S    + VI ++  +  +  RFF+W  K     S+  +    + LLK    
Sbjct: 59  SLKSLVSHMSPNVASQVISLQRSDNDICVRFFMWVCKHS---SYCFDPTQKNQLLKLI-- 113

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKAL----ESFGKMKE-------FD 128
                    + SG   V  DV   LI    +   CEK +      F +++E       + 
Sbjct: 114 ---------VSSGLFRVAHDVIVALIR---ECSRCEKEMLKLISCFDELREVSGFRLNYP 161

Query: 129 CQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAI 188
           C   + +  A L++ F      LA   Y  M     +  ++ +  ++N L K+G TE A 
Sbjct: 162 CYSSLLMSLAKLDLGF------LAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE 215

Query: 189 KMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSG-CSPDFVAYNALLNG 247
             + ++ + G L +    T ++ G C+     +A ++F  M   G C+P+ V+Y+ L++G
Sbjct: 216 MFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHG 275

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C++ R++EA  L     + G  P   +Y+ LI  L      D+A+  + +M     +P+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPN 335

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           V  Y V+I GL   GK+++A  +   M + GI P    YNALI G+C  G +  A  L  
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLT 395

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
            + KR   PN  TF  L+ G+CR G    A  L  +M   G  P +  +N LIDGLC+ G
Sbjct: 396 VMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455

Query: 428 ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQL 487
            +  A    YK+    N           +   D  +   ++  +C  G    A   L  +
Sbjct: 456 HMNVA----YKLLTSMNSF---------DLEPDCLTFTAIINAFCKQGKADVASAFLGLM 502

Query: 488 AESGNLPDIITYNSLINGFCKVGNINGAL-----------------------------KL 518
              G   D +T  +LI+G C VG    AL                             KL
Sbjct: 503 LRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKL 562

Query: 519 FKELQL------KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
            +EL +       GL P  VTY TL++GL R      +FR+   M  +GC P+   Y  +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTII 622

Query: 573 MTWSCRRRKFSLAFSLWLQYLRD--ISGRDDESMKSIEEFLQKGEVENA---IQGLLEMD 627
           +   C+  +   A  L L  ++D  +S         ++ ++  G+++ A   ++ ++E  
Sbjct: 623 INGLCQFGRVEEAEKL-LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681

Query: 628 FKLNDFQLAPYTIWLIG--LCQDGQVK---EALNIFSVLVECKAIVTPPSCVKLIHGLCK 682
           ++LND     Y+  L G  L Q G  +   E +     +VE     T   C+ L+  LCK
Sbjct: 682 YELND---RIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCK 738

Query: 683 RGYLDLAMDVFLYTLKNGFILRPRV 707
            G  D +  +    LK+G  L   +
Sbjct: 739 EGRTDESNGLVQTILKSGVFLEKAI 763


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 164/685 (23%), Positives = 306/685 (44%), Gaps = 41/685 (5%)

Query: 82  YWQTLDELRSGNVSVVSDV---------FFVLISGYYKVGDCEKALESFGKMKEFDCQPD 132
           +W+  D L++ +V   +++         +  LI+ Y K    E++   + KM      PD
Sbjct: 296 FWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD 355

Query: 133 VYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLD 192
           V   +++L    R      A  ++ EM ++   PN V+++ +IN L KSG+   A  +  
Sbjct: 356 VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQS 415

Query: 193 EMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLR 252
           +M  RGI  +  T T V+ GL ++ +  EA  +F  +     +P+ V Y+ALL+G+CKL 
Sbjct: 416 QMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLG 475

Query: 253 RVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYG 312
           +++ A  +L+  EK+   P + ++S +I+G  +     +A    R+M +  + P+ ++Y 
Sbjct: 476 KMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYA 535

Query: 313 VMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKR 372
           ++I G  +AG+   A     +M+ R +      ++ L+     +G +D+ARSL ++++ +
Sbjct: 536 ILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSK 595

Query: 373 DSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA 432
              P+   +  LI G  + G    A  +  +M++      V  +NALI GL + G+ +  
Sbjct: 596 GIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR 655

Query: 433 NLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            +    +E+G  P              D  +  T++  YC  G    A  IL ++   G 
Sbjct: 656 YVCSRMIELGLAP--------------DCITYNTIINTYCIKGKTEDALDILNEMKSYGI 701

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
           +P+ +TYN LI G CK G +  A     E+ +    P  +T+  L+    R ++ +   +
Sbjct: 702 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 761

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCR---RRKFSLAFSLWLQYLRDISGRDDESMKSIEE 609
           I  ++  +G   S  VY +L+T  CR    RK  +     ++  R IS         I  
Sbjct: 762 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVK--RGISADLVTYNALIRG 819

Query: 610 FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDG----QVKEALNIFSVLVECK 665
           +     VE A++   +M        +  Y   L GL   G     ++E   + S + E  
Sbjct: 820 YCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG 879

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVH 725
            +    +   L+ G  + G     + + +  +  GF+   +  N L+    ++K  K + 
Sbjct: 880 LVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISD--YAKSGKMIE 937

Query: 726 AYHLLCRMKSVG-------YDLDAC 743
           A  LL  + + G       YD+  C
Sbjct: 938 ARELLNDLLTKGRIPNSFTYDILTC 962



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 235/513 (45%), Gaps = 62/513 (12%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           +  L+ GY K+G  E A     KM++    P+V  +++++N   +K +   A+ V  EMV
Sbjct: 464 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 523

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           + N +PN + +++LI+G  K+G+ +VA     EM  R +  +   + I+++ L ++ R D
Sbjct: 524 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 583

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           EA  L + M   G  PD V Y +L++G+ K      AL++++  ++      + +Y+ LI
Sbjct: 584 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 643

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
            GL R  +YD  Y   R M E  + PD + Y  +I      GK +DA+ +L++M+  GI+
Sbjct: 644 KGLLRLGKYDPRYVCSR-MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN--THTFTI--------------- 383
           P+   YN LI G C  G +++A S   E+   + +P   TH F +               
Sbjct: 703 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 762

Query: 384 ------------------LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
                             LI   CR GM   A+ + ++M K G    +  +NALI G C 
Sbjct: 763 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 822

Query: 426 AGELEKANLLFYKMEI-GKNP------TLFLRLSQGG-------------------NRVH 459
              +EKA   + +M + G  P      TL   LS  G                     V 
Sbjct: 823 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 882

Query: 460 DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLF 519
           + A+   +V  Y   G   K   + +++   G +P + TYN LI+ + K G +  A +L 
Sbjct: 883 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 942

Query: 520 KELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
            +L  KG  P+S TY  L  G   +  E +  R
Sbjct: 943 NDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDR 975



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 154/612 (25%), Positives = 274/612 (44%), Gaps = 70/612 (11%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI GY + G   +A E        D + D+  YN +L  AF K                 
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLK-AFCKT---------------- 280

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQ---RGILPNKFTYTIVISGLCQINRAD 220
              ++     L N +    K E  +K  D +TQ   + + P   TYT +I+  C+    +
Sbjct: 281 --GDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVE 338

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           E++ L+ KM  +G  PD V  +++L GFC+  ++ EA  L R   + G  P   SY+ +I
Sbjct: 339 ESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATII 398

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           + LF++ R  EA+    +M    I  D+V    ++ GL + GK K+A ++   + +  + 
Sbjct: 399 NSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           P+   Y+AL+ G+C LG ++ A  +  ++ K    PN  TF+ +I G  + GM+  A  +
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHD 460
             +M +    P+  ++  LIDG  KAGE + A+    +M+         R  +  N + D
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS--------RRLEESNVIFD 570

Query: 461 KASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFK 520
                 ++      G + +A  +++ +   G  PDI+ Y SLI+G+ K GN   AL + +
Sbjct: 571 -----ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQ 625

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
           E++ K +R D V Y  LI GL R+ + +  + +  +M + G  P    Y +++   C   
Sbjct: 626 EMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYC--- 681

Query: 581 KFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTI 640
                          I G+ ++++  + E    G + NA+                 Y I
Sbjct: 682 ---------------IKGKTEDALDILNEMKSYGIMPNAVT----------------YNI 710

Query: 641 WLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNG 700
            + GLC+ G V++A +    ++  + + TP +   L+    +    D  + +    + +G
Sbjct: 711 LIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASG 770

Query: 701 FILRPRVCNYLL 712
             L   V N L+
Sbjct: 771 LELSLTVYNTLI 782



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 155/647 (23%), Positives = 277/647 (42%), Gaps = 101/647 (15%)

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           VT++ +I G  + G  +    +L EM +RG+  +  T  I++ G C+I     A  +   
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEAL-------------------ALLRSFEKDG- 268
           + D G + D +  N L++G+C+   + +A                     LL++F K G 
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282

Query: 269 ----------------------------------FVPRLGSYSCLIDGLFRAKRYDEAYA 294
                                               P L +Y+ LI    +    +E+++
Sbjct: 283 LTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
            Y+KM    I PDVV    ++ G    GK+ +A  L  +M E G+ P+   Y  +I    
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLF 402

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             G + +A +LQ ++  R    +  T T ++ G+ + G   +A+++F  + K    P+  
Sbjct: 403 KSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCV 462

Query: 415 MFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTA 474
            ++AL+DG CK G++E A L+  KME    P   +  S             +++  Y   
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS-------------SIINGYAKK 509

Query: 475 GLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTY 534
           G++ KA  +L ++ +   +P+ I Y  LI+G+ K G  + A    KE++ + L   +V +
Sbjct: 510 GMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIF 569

Query: 535 GTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLR 594
             L+N L+RV R ++A  +   M   G  P    Y SL+    +      A S+ +Q ++
Sbjct: 570 DILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSI-VQEMK 628

Query: 595 DISGRDDESMKSIEEFLQKGEVENA-IQGLLEMD--------FKLNDFQLAP----YTIW 641
           + + R D                NA I+GLL +          ++ +  LAP    Y   
Sbjct: 629 EKNIRFDVV------------AYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTI 676

Query: 642 LIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLK 698
           +   C  G+ ++AL+I +   E K+    P+ V    LI GLCK G ++ A       L 
Sbjct: 677 INTYCIKGKTEDALDILN---EMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLV 733

Query: 699 NGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             F+  P    +L+++   S+   K+   H   ++ + G +L   +Y
Sbjct: 734 MEFVPTPITHKFLVKAYSRSEKADKILQIHE--KLVASGLELSLTVY 778



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 193/406 (47%), Gaps = 46/406 (11%)

Query: 104  LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
            LI GY+K G+   AL    +MKE + + DV  YNA++    R   +     V   M++L 
Sbjct: 607  LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELG 665

Query: 164  CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI------- 216
              P+ +T++ +IN     GKTE A+ +L+EM   GI+PN  TY I+I GLC+        
Sbjct: 666  LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 725

Query: 217  ----------------------------NRADEAYRLFLKMKDSGCSPDFVAYNALLNGF 248
                                         +AD+  ++  K+  SG       YN L+  F
Sbjct: 726  SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVF 785

Query: 249  CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
            C+L    +A  +L    K G    L +Y+ LI G       ++A   Y +MF + I P++
Sbjct: 786  CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNI 845

Query: 309  VLYGVMIRGLSEAG----KVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARS 364
              Y  ++ GLS AG     +++  KL+S+M ERG+VP+   Y+ L+ G+  +G   +   
Sbjct: 846  TTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTII 905

Query: 365  LQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG-- 422
            L +E+  +  +P   T+ +LI    ++G + +A++L N +   G  P+   ++ L  G  
Sbjct: 906  LHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 965

Query: 423  -LCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             L    E++++    Y++E+ K   L + + + G +   KA ++ +
Sbjct: 966  NLSYEPEIDRSLKRSYEIEVKK---LLIEMGRKGLKFSKKAEIRRL 1008



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 130/553 (23%), Positives = 228/553 (41%), Gaps = 116/553 (20%)

Query: 149 FLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTI 208
           F  A A +  M  L  +P +  ++ L+   + SG       M  +M   G++P+ F+  +
Sbjct: 75  FSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNV 134

Query: 209 VISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDG 268
           ++  LC++   D A   +L+  D     D V YN ++ GFC+   VD+   LL    K G
Sbjct: 135 LVHSLCKVGDLDLALG-YLRNNDV-VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRG 192

Query: 269 FVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM 328
                    C                            D +   ++++G    G V+ A 
Sbjct: 193 L--------CF---------------------------DSITCNILVKGYCRIGLVQYAE 217

Query: 329 KLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGM 388
            ++ ++ + G+  D    N LI G+C+ GL+ QA  L    W+ D   +  T+  L+   
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAF 277

Query: 389 CRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK-NPTL 447
           C+ G +  A+ LFN+                I G  K  +  K N +  + EI    PTL
Sbjct: 278 CKTGDLTRAESLFNE----------------ILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                          +  T++  YC    + +++ +  ++  +G +PD++T +S++ GFC
Sbjct: 322 --------------VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPA 567
           + G +  A  LF+E+   GL P+ V+Y T+IN L +  R  +AF +  QM   G +    
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 568 VYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMD 627
              ++M                                  +   + G+ + A + + E  
Sbjct: 428 TCTTVM----------------------------------DGLFKVGKTKEA-EEVFETI 452

Query: 628 FKLNDFQLAP----YTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCV---KLIHGL 680
            KLN   LAP    Y+  L G C+ G+++ A     VL + +    PP+ +    +I+G 
Sbjct: 453 LKLN---LAPNCVTYSALLDGYCKLGKMELAE---LVLQKMEKEHVPPNVITFSSIINGY 506

Query: 681 CKRGYLDLAMDVF 693
            K+G L  A+DV 
Sbjct: 507 AKKGMLSKAVDVL 519



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 80  DLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAV 139
           D   Q  ++L +  + +   V+  LI+ + ++G   KA     +M +     D+  YNA+
Sbjct: 757 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNAL 816

Query: 140 LNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSG----KTEVAIKMLDEMT 195
           +           AL  Y +M      PNI T++ L+ GLS +G      E   K++ EM 
Sbjct: 817 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMN 876

Query: 196 QRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVD 255
           +RG++PN  TY I++SG  ++    +   L ++M   G  P    YN L++ + K  ++ 
Sbjct: 877 ERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMI 936

Query: 256 EALALLRSFEKDGFVPRLGSYSCLIDG 282
           EA  LL      G +P   +Y  L  G
Sbjct: 937 EARELLNDLLTKGRIPNSFTYDILTCG 963


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 239/532 (44%), Gaps = 59/532 (11%)

Query: 101 FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F ++++ Y + GD   A  +F  M+    +P  ++Y ++++     +    AL+   +M 
Sbjct: 292 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 351

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+L+ G +K    E A     E  +R    N   Y  +I   CQ     
Sbjct: 352 EEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMT 411

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
           +A  L  +M++ G       Y+ +++G+  +   ++ L +    ++ GF P + SY CLI
Sbjct: 412 QAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLI 471

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    + M    I+ ++  Y ++I G        +A  +  D+ + G+ 
Sbjct: 472 NLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLK 531

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +I+ FC +G +D+A     E+ K    P T TF  +I G  R+G +  A ++
Sbjct: 532 PDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 591

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M  +GC P+V  FNALI GL +  ++EKA  +  +M                     
Sbjct: 592 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 651

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA----------------- 480
             + GK    F +L   G  + D  + + +++  C +G +  A                 
Sbjct: 652 LGDTGKAFEYFTKLKTEGLEL-DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF 710

Query: 481 -YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            Y IL+                 Q+ + G  PDI TY S IN  CK G++  A K  +E+
Sbjct: 711 VYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEM 770

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMT 574
           ++ G++P+  TY TLI+G  R    E A + F +M   G  P  AVY  LMT
Sbjct: 771 EVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMT 822



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 187/420 (44%), Gaps = 15/420 (3%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +    D++  ++ GY  +G+ EK L  F ++KE    P V  Y  ++N+  +  
Sbjct: 419 EMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIG 478

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M       N+ T+S+LING  +      A  + +++ + G+ P+   Y 
Sbjct: 479 KVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYN 538

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I   C +   D A R   +M+     P    +  +++GF +   +  AL +       
Sbjct: 539 NIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWS 598

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +++ LI GL    + ++A     +M    I P+   Y  ++ G +  G    A
Sbjct: 599 GCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKA 658

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + ++  G+  D Y Y AL+K  C  G +  A ++  E+  +    NT  + ILI G
Sbjct: 659 FEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG 718

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME-IGKNPT 446
             R G V +A +L  +M++ G  P +  + + I+  CKAG++++A     +ME +G  P 
Sbjct: 719 WARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPN 778

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
           +               +  T++  +  A L  KA K   ++  +G  PD   Y+ L+   
Sbjct: 779 I--------------KTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 140/345 (40%), Gaps = 70/345 (20%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
            D   +T+ E++       +  F  +I G+ + GD  +ALE F  M+   C P V+ +NA
Sbjct: 550 MDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNA 609

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
                                              LI GL +  + E A+++LDEM+  G
Sbjct: 610 -----------------------------------LILGLVEKCQMEKAVEILDEMSLAG 634

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           I PN+ TYT ++ G   +    +A+  F K+K  G   D   Y ALL   CK  R+  AL
Sbjct: 635 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSAL 694

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           A+ R             Y+ LIDG  R     EA    ++M +E ++PD+  Y   I   
Sbjct: 695 AVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINAC 754

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNT 378
            +AG ++ A K + +M   G+ P+   Y  LI G                 W R SLP  
Sbjct: 755 CKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHG-----------------WARASLP-- 795

Query: 379 HTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGL 423
                           + A K F +M+ AG  P   +++ L+  L
Sbjct: 796 ----------------EKALKCFQEMKSAGLKPDKAVYHCLMTSL 824



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 111/556 (19%), Positives = 228/556 (41%), Gaps = 57/556 (10%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P++  + ++++   +      A   F  M+  G  P    Y +L++ +   R ++EAL+ 
Sbjct: 287 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 346

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +R  +++G    L +YS L+ G  +    + A  W+++  E     + ++YG +I    +
Sbjct: 347 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 406

Query: 321 AGKVKDAMKLLSDMRERGI-----------------------------------VPDTYC 345
           A  +  A  L+ +M E GI                                    P    
Sbjct: 407 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 466

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 405
           Y  LI  +  +G + +A  +   +       N  T+++LI G  R     +A  +F  + 
Sbjct: 467 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 526

Query: 406 KAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN-PTLFLRLSQGGNRVHDKASL 464
           K G  P V ++N +I   C  G +++A     +M+  ++ PT                + 
Sbjct: 527 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTT--------------RTF 572

Query: 465 QTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQL 524
             ++  +  +G + +A +I   +  SG +P + T+N+LI G  +   +  A+++  E+ L
Sbjct: 573 MPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSL 632

Query: 525 KGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSL 584
            G+ P+  TY T+++G   +     AF  F ++   G       Y++L+   C+  +   
Sbjct: 633 AGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQS 692

Query: 585 AFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLI 643
           A ++  +       R+       I+ + ++G+V  A + + +M  +     +  YT ++ 
Sbjct: 693 ALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFIN 752

Query: 644 GLCQDGQVKEALNIFSVLVECKAIVTPPSC---VKLIHGLCKRGYLDLAMDVFLYTLKNG 700
             C+ G ++ A      + E + +   P+      LIHG  +    + A+  F      G
Sbjct: 753 ACCKAGDMQRATK---TIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAG 809

Query: 701 FILRPRVCNYLLRSLL 716
                 V + L+ SLL
Sbjct: 810 LKPDKAVYHCLMTSLL 825



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 9/283 (3%)

Query: 84  QTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           + LDE+    +S     +  ++ GY  +GD  KA E F K+K    + DVY Y A+L   
Sbjct: 625 EILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKAC 684

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            +      ALAV  EM       N   +++LI+G ++ G    A +++ +M Q G+ P+ 
Sbjct: 685 CKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDI 744

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
            TYT  I+  C+      A +   +M+  G  P+   Y  L++G+ +    ++AL   + 
Sbjct: 745 HTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQE 804

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY------RKMFEEKIEPDVVLYGVMIRG 317
            +  G  P    Y CL+  L       E Y +       R+M E ++  D+   G  +  
Sbjct: 805 MKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDM---GTAVHW 861

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLD 360
                K++     L++  ++   PD   YN  +    +L + D
Sbjct: 862 SKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNSDDELDVDD 904



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/448 (21%), Positives = 186/448 (41%), Gaps = 49/448 (10%)

Query: 298 KMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLG 357
           + FE   +P    +G+M+   +  G +  A      MR RGI P ++ Y +LI  +    
Sbjct: 279 QAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGR 338

Query: 358 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFN 417
            +++A S   ++ +     +  T++IL+ G  +    + A   F + ++     +  ++ 
Sbjct: 339 DMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYG 398

Query: 418 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLI 477
            +I   C+A  + +A  L  +ME            +G +   D     TM++ Y   G  
Sbjct: 399 NIIYAHCQACNMTQAEALVREME-----------EEGIDAPID--IYHTMMDGYTIIGNE 445

Query: 478 HKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTL 537
            K   +  +L E G  P +I+Y  LIN + K+G ++ AL++ K +++ G++ +  TY  L
Sbjct: 446 EKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSML 505

Query: 538 INGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDIS 597
           ING  R+    +AF +F  + ++G  P   +Y ++                         
Sbjct: 506 INGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI------------------------- 540

Query: 598 GRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNI 657
                    I  F   G ++ AI+ + EM  + +      +   + G  + G ++ AL I
Sbjct: 541 ---------IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEI 591

Query: 658 FSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLF 717
           F ++     I T  +   LI GL ++  ++ A+++       G          ++     
Sbjct: 592 FDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYAS 651

Query: 718 SKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             D  K  A+    ++K+ G +LD   Y
Sbjct: 652 LGDTGK--AFEYFTKLKTEGLELDVYTY 677


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 258/566 (45%), Gaps = 52/566 (9%)

Query: 79  FDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
           +D   + LDE+RS  + +       +IS   + G  ++A +   ++K    +P    YN+
Sbjct: 267 WDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNS 326

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +L +  +  ++  AL++  EM   NC P+ VT++ L     ++G  +  + ++D MT +G
Sbjct: 327 MLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKG 386

Query: 199 ILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           ++PN  TYT VI    +  R D+A RLF  MKD GC+P+   YN++L    K  R ++ +
Sbjct: 387 VMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVI 446

Query: 259 -----------------------------------ALLRSFEKDGFVPRLGSYSCLIDGL 283
                                               +LR  +  GF P   +++ LI   
Sbjct: 447 KVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAY 506

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R     ++   Y +M +    P V  Y  ++  L+  G  K A  ++ DMR +G  P+ 
Sbjct: 507 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNE 566

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y+ L+  +   G +     ++ EI+     P+      L+    +   +   ++ F++
Sbjct: 567 NSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQ 626

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRVHDKA 462
           ++K G  P + + N+++    +     KA  +L +  E G  P LF              
Sbjct: 627 LQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLF-------------- 672

Query: 463 SLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
           +   +++ Y   G   KA ++L  +  SG  PD+++YN++I GFC+ G +  A+ +  E+
Sbjct: 673 TYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEM 732

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
             KG++P  VTY T ++G   ++  ++A  +   M ++ C PS   YK L+   C+  K+
Sbjct: 733 TTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKY 792

Query: 583 SLAFSLWLQYLR-DISGRDDESMKSI 607
             A     +    DIS  DD+S+K +
Sbjct: 793 EEAMDFVSKIKELDIS-FDDQSVKRL 817



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/597 (23%), Positives = 262/597 (43%), Gaps = 21/597 (3%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR-KQLFLLALAVYYE 158
            +  ++  Y + G  ++A++ FGKMKE    P +  YN +L++  +  + +   L +  E
Sbjct: 217 AYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDE 276

Query: 159 MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINR 218
           M       +  T S +I+   + G  + A K L E+   G  P   TY  ++    +   
Sbjct: 277 MRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGI 336

Query: 219 ADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSC 278
             EA  +  +M+D+ C PD V YN L   + +   +DE +A++ +    G +P   +Y+ 
Sbjct: 337 YTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTT 396

Query: 279 LIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERG 338
           +ID   +A R D+A   +  M +    P+V  Y  ++  L +  + +D +K+L +M+  G
Sbjct: 397 VIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNG 456

Query: 339 IVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQ 398
             P+   +N ++    + G  +    +  E+      P+  TF  LI    R G   D+ 
Sbjct: 457 CAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSA 516

Query: 399 KLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEI-GKNPTLFLRLSQGGNR 457
           K++ +M K+G  P V  +NAL++ L + G+ + A  +   M   G  P            
Sbjct: 517 KMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKP------------ 564

Query: 458 VHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALK 517
             ++ S   ++  Y  AG +    K+  ++ +    P  I   +L+    K  ++ G  +
Sbjct: 565 --NENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMER 622

Query: 518 LFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSC 577
            F +LQ  G +PD V   ++++   R      A  +   + + G  P+   Y  LM    
Sbjct: 623 AFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYV 682

Query: 578 RRRKFSLAFSLWLQYLRDISGRDDESMK---SIEEFLQKGEVENAIQGLLEMDFKLNDFQ 634
           R  +   A  + L+ +++ SG + + +     I+ F +KG ++ AI  L EM  K     
Sbjct: 683 REGECWKAEEV-LKGIQN-SGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPT 740

Query: 635 LAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
           +  Y  +L G        EA  +   ++E     +  +   L+ G CK G  + AMD
Sbjct: 741 IVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMD 797


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 272/587 (46%), Gaps = 54/587 (9%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKM---KDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           N+ TY+ V+ GLC+  + ++A  LFL+    KD G  P  V++N++++G+CKL  VD A 
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIG--PSVVSFNSIMSGYCKLGFVDMAK 284

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           +   +  K G VP + S++ LI+GL       EA      M +  +EPD V Y ++ +G 
Sbjct: 285 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 344

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPN 377
              G +  A +++ DM ++G+ PD   Y  L+ G C LG +D    L  ++  R   L +
Sbjct: 345 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 404

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
               ++++ G+C+ G +D+A  LFN+M+  G  P +  ++ +I GLCK G+ + A  L+ 
Sbjct: 405 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464

Query: 438 KM-------EIGKNPTLFLRLSQGGNRVHDKASLQTM---------------VEQYCTAG 475
           +M           +  L L L Q G  +  ++ L ++               ++ Y  +G
Sbjct: 465 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 524

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I +A ++   + E+G  P + T+NSLI G+CK  NI  A K+   ++L GL P  V+Y 
Sbjct: 525 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 584

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF--------SLAFS 587
           TL++        +    +  +M   G  P+   Y  +    CR  K            F 
Sbjct: 585 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 644

Query: 588 LWLQYLRDISGR----DDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWL 642
              Q LRD+       D  +  +I ++L + +  +     LE+    N D   A Y I +
Sbjct: 645 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 704

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             LC  G +++A +    L E    ++  +   LI   C +G  ++A+ +F   L  GF 
Sbjct: 705 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 764

Query: 703 LRPR----VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY--DLDAC 743
           +  R    V N L R  L ++           C M S G   DLD C
Sbjct: 765 VSIRDYSAVINRLCRRHLVNESK------FFFCLMLSQGISPDLDIC 805



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 224/480 (46%), Gaps = 4/480 (0%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+G   VG   +ALE    M +   +PD   YN +        +   A  V  +M+  
Sbjct: 304 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 363

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT-YTIVISGLCQINRADE 221
              P+++T+++L+ G  + G  ++ + +L +M  RG   N     ++++SGLC+  R DE
Sbjct: 364 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 423

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  LF +MK  G SPD VAY+ +++G CKL + D AL L         +P   ++  L+ 
Sbjct: 424 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 483

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +     EA +    +       D+VLY ++I G +++G +++A++L   + E GI P
Sbjct: 484 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 543

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               +N+LI G+C    + +AR +   I      P+  ++T L+      G      +L 
Sbjct: 544 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 603

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M+  G  P+   ++ +  GLC+  + E  N +  +  I +     LR  +      D+
Sbjct: 604 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL-RERIFEKCKQGLRDMESEGIPPDQ 662

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFK 520
            +  T+++  C    +  A+ + +++ +S NL     TYN LI+  C  G I  A     
Sbjct: 663 ITYNTIIQYLCRVKHLSGAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 721

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            LQ + +      Y TLI         E A ++F Q+   G   S   Y +++   CRR 
Sbjct: 722 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 781



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 210/480 (43%), Gaps = 26/480 (5%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + +L  G++ +G    A E    M +    PDV  Y  +L    +     + L +  
Sbjct: 334 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 393

Query: 158 EMVKLNC-LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           +M+     L +I+  S++++GL K+G+ + A+ + ++M   G+ P+   Y+IVI GLC++
Sbjct: 394 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 453

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            + D A  L+ +M D    P+   + ALL G C+   + EA +LL S    G    +  Y
Sbjct: 454 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 513

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +IDG  ++   +EA   ++ + E  I P V  +  +I G  +   + +A K+L  ++ 
Sbjct: 514 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 573

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P    Y  L+  + + G       L+ E+      P   T++++  G+CR    ++
Sbjct: 574 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 633

Query: 397 A-----QKLFNK-------MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
                 +++F K       ME  G  P    +N +I  LC+   L  A            
Sbjct: 634 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA------------ 681

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             +FL + +  N     A+   +++  C  G I KA   +  L E         Y +LI 
Sbjct: 682 -FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 740

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             C  G+   A+KLF +L  +G       Y  +IN L R     ++   F  M   G +P
Sbjct: 741 AHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 800



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 169/393 (43%), Gaps = 48/393 (12%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           V++SG  K G  ++AL  F +MK     PD+  Y+ V++   +   F +AL +Y EM   
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469

Query: 163 NCLPN-----------------------------------IVTFSLLINGLSKSGKTEVA 187
             LPN                                   IV ++++I+G +KSG  E A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +++   + + GI P+  T+  +I G C+     EA ++   +K  G +P  V+Y  L++ 
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 589

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL------------FRAKRYDEAYAW 295
           +           L R  + +G  P   +YS +  GL             R + +++    
Sbjct: 590 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 649

Query: 296 YRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCD 355
            R M  E I PD + Y  +I+ L     +  A   L  M+ R +   +  YN LI   C 
Sbjct: 650 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 709

Query: 356 LGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGM 415
            G + +A S    + +++   +   +T LI   C  G  + A KLF+++   G   S+  
Sbjct: 710 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 769

Query: 416 FNALIDGLCKAGELEKANLLFYKM-EIGKNPTL 447
           ++A+I+ LC+   + ++   F  M   G +P L
Sbjct: 770 YSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 24/260 (9%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL------------NI 142
           SVVS  +  L+  Y   G+ +   E   +MK     P    Y+ +             N 
Sbjct: 579 SVVS--YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 636

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R+++F        +M      P+ +T++ +I  L +      A   L+ M  R +  +
Sbjct: 637 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 696

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY I+I  LC      +A      +++   S    AY  L+   C     + A+ L  
Sbjct: 697 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 756

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                GF   +  YS +I+ L R    +E+  ++  M  + I PD+ +  VMI+      
Sbjct: 757 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIK------ 810

Query: 323 KVKDAMKLLSDMRERGIVPD 342
               + +LLS   + G++PD
Sbjct: 811 ----SDELLSWTIKWGLLPD 826


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 244/519 (47%), Gaps = 53/519 (10%)

Query: 175 INGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGC 234
           +N L K+GK   A+  L++M +RG  P+    T +I GL    R ++A R+   ++  G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG- 142

Query: 235 SPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYA 294
            PD  AYNA+++GFC+  R D A  ++   +  GF P + +Y+ LI  L    + D A  
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 295 WYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFC 354
              ++ E+   P V+ Y ++I      G + DAM+LL +M  RG+ PD Y YN +++G C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 355 DLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVG 414
             GL+D+A      +   ++ P+ + + +L+ G+   G  +  ++L + M   GC P++ 
Sbjct: 263 KRGLVDRAFEF---VSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 415 MFNALIDGLCKAGEL-EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
            ++ LI  LC+ G+  E  ++L    E G NP              D      ++  +C 
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNP--------------DAYCYDPLISAFCK 365

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
            G +  A   +  +  +G LPDI+ YN+++   CK G  + AL +FK+L+  G  P++ +
Sbjct: 366 EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASS 425

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL 593
           Y T+   L     +  A  +  +M  NG  P    Y SL++  CR               
Sbjct: 426 YNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCR--------------- 470

Query: 594 RDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKE 653
                               G V+ AI  L++M+       +  Y I L+GLC+  ++ +
Sbjct: 471 -------------------DGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVD 511

Query: 654 ALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDV 692
           A+ + +V+V+        +   L+ G+   G+   A+++
Sbjct: 512 AIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVEL 550



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 17/438 (3%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           LI G +     EKA+     ++++   PD + YNAV++   R   F  A  V   M    
Sbjct: 118 LIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRG 176

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             P++VT+++LI  L   GK ++A+K++D++ +    P   TYTI+I         D+A 
Sbjct: 177 FSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAM 236

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
           RL  +M   G  PD   YN ++ G CK   VD A   + +       P L  Y+ L+ GL
Sbjct: 237 RLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNT---TPSLNLYNLLLKGL 293

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
               R++        M  +  EP++V Y V+I  L   GK  +A+ +L  M+E+G+ PD 
Sbjct: 294 LNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDA 353

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
           YCY+ LI  FC  G +D A     ++     LP+   +  ++  +C+ G  D+A  +F K
Sbjct: 354 YCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKK 413

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKAS 463
           +E+ GC P+   +N +   L  +G+  +A  +  +M           LS G +   D+ +
Sbjct: 414 LEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEM-----------LSNGVD--PDRIT 460

Query: 464 LQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQ 523
             +++   C  G++ +A  +L+ +  +   P +I+YN ++ G CK   I  A+++   + 
Sbjct: 461 YNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMV 520

Query: 524 LKGLRPDSVTYGTLINGL 541
             G +P+  TY  L+ G+
Sbjct: 521 DNGCQPNETTYTLLVEGV 538



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 218/455 (47%), Gaps = 50/455 (10%)

Query: 154 AVYY--EMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+Y+  +MVK    P+++  + LI GL  S +TE A+++++ + Q G  P+ F Y  VIS
Sbjct: 96  ALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD-PDSFAYNAVIS 154

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
           G C+ +R D A R+ L+MK  G SPD V YN L+   C   ++D AL ++    +D   P
Sbjct: 155 GFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNP 214

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAM--- 328
            + +Y+ LI+        D+A     +M    ++PD+  Y V++RG+ + G V  A    
Sbjct: 215 TVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFV 274

Query: 329 -----------------------------KLLSDMRERGIVPDTYCYNALIKGFCDLGLL 359
                                        +L+SDM  +G  P+   Y+ LI   C  G  
Sbjct: 275 SNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKA 334

Query: 360 DQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNAL 419
            +A  +   + ++   P+ + +  LI   C+ G VD A    + M  AG  P +  +N +
Sbjct: 335 GEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTI 394

Query: 420 IDGLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIH 478
           +  LCK G  ++A  +F K+E +G  P              + +S  TM     ++G   
Sbjct: 395 MGSLCKKGRADEALNIFKKLEEVGCPP--------------NASSYNTMFGALWSSGDKI 440

Query: 479 KAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
           +A  +++++  +G  PD ITYNSLI+  C+ G ++ A+ L  +++    +P  ++Y  ++
Sbjct: 441 RALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVL 500

Query: 539 NGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            GL +  R  DA  +   M  NGC P+   Y  L+
Sbjct: 501 LGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLV 535



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 9/376 (2%)

Query: 57  RKRLRSFASN----SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVG 112
           R + R F+ +    + +I  L      DL  + +D+L   N +     + +LI      G
Sbjct: 171 RMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHG 230

Query: 113 DCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV-KLNCLPNIVTF 171
             + A+    +M     QPD+Y YN ++    ++ L   A    +E V  LN  P++  +
Sbjct: 231 SIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRA----FEFVSNLNTTPSLNLY 286

Query: 172 SLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKD 231
           +LL+ GL   G+ E   +++ +M  +G  PN  TY+++IS LC+  +A EA  +   MK+
Sbjct: 287 NLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKE 346

Query: 232 SGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDE 291
            G +PD   Y+ L++ FCK  +VD A+  +      G++P + +Y+ ++  L +  R DE
Sbjct: 347 KGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADE 406

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIK 351
           A   ++K+ E    P+   Y  M   L  +G    A+ ++ +M   G+ PD   YN+LI 
Sbjct: 407 ALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLIS 466

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
             C  G++D+A  L V++ + +  P   ++ I++ G+C+   + DA ++   M   GC P
Sbjct: 467 SLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQP 526

Query: 412 SVGMFNALIDGLCKAG 427
           +   +  L++G+  AG
Sbjct: 527 NETTYTLLVEGVGYAG 542



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 32/365 (8%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            +  +ISG+ +    + A     +MK     PDV  YN ++     +    LAL V  ++
Sbjct: 148 AYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQL 207

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           ++ NC P ++T+++LI      G  + A+++LDEM  RG+ P+ +TY +++ G+C+    
Sbjct: 208 LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLV 267

Query: 220 DEAY--------------------------------RLFLKMKDSGCSPDFVAYNALLNG 247
           D A+                                RL   M   GC P+ V Y+ L++ 
Sbjct: 268 DRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISS 327

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
            C+  +  EA+ +LR  ++ G  P    Y  LI    +  + D A  +   M      PD
Sbjct: 328 LCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPD 387

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           +V Y  ++  L + G+  +A+ +   + E G  P+   YN +       G   +A ++ +
Sbjct: 388 IVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMIL 447

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+      P+  T+  LI  +CR+GMVD+A  L   ME+    P+V  +N ++ GLCKA 
Sbjct: 448 EMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAH 507

Query: 428 ELEKA 432
            +  A
Sbjct: 508 RIVDA 512



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 207/473 (43%), Gaps = 63/473 (13%)

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGI 339
           ++ L +  +Y EA  +  +M +   +PDV+L   +I+GL  + + + A++++  + + G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQK 399
            PD++ YNA+I GFC     D A  + + +  R   P+  T+ ILI  +C  G +D A K
Sbjct: 144 -PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 400 LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKA-NLLFYKMEIGKNPTLFLRLSQGGNRV 458
           + +++ +  C P+V  +  LI+     G ++ A  LL   M  G  P ++          
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMY---------- 252

Query: 459 HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKL 518
               +   +V   C  GL+ +A++ +  L  +   P +  YN L+ G    G      +L
Sbjct: 253 ----TYNVIVRGMCKRGLVDRAFEFVSNLNTT---PSLNLYNLLLKGLLNEGRWEAGERL 305

Query: 519 FKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCR 578
             ++ +KG  P+ VTY  LI+ L R  +  +A  +   M + G  P    Y  L++  C+
Sbjct: 306 MSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCK 365

Query: 579 RRKFSLAFSL--------WLQYLRDIS---------GRDDESM---KSIEE--------- 609
             K  LA           WL  + + +         GR DE++   K +EE         
Sbjct: 366 EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASS 425

Query: 610 -------FLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLV 662
                      G+   A+  +LEM     D     Y   +  LC+DG V EA+ +   LV
Sbjct: 426 YNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGL---LV 482

Query: 663 ECKAIVTPPSCVK---LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLL 712
           + +     P+ +    ++ GLCK   +  A++V    + NG   +P    Y L
Sbjct: 483 DMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNG--CQPNETTYTL 533



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 116/231 (50%)

Query: 100 VFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEM 159
            + VLIS   + G   +A++    MKE    PD Y Y+ +++   ++    LA+    +M
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 160 VKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRA 219
           +    LP+IV ++ ++  L K G+ + A+ +  ++ + G  PN  +Y  +   L      
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439

Query: 220 DEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCL 279
             A  + L+M  +G  PD + YN+L++  C+   VDEA+ LL   E+  + P + SY+ +
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 280 IDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKL 330
           + GL +A R  +A      M +   +P+   Y +++ G+  AG    A++L
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVEL 550



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 79  FDLYWQTLDELR---------SGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDC 129
           F   W + D++R         S  V      +  LIS   + G  ++A+     M+  + 
Sbjct: 430 FGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEW 489

Query: 130 QPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIK 189
           QP V  YN VL    +    + A+ V   MV   C PN  T++LL+ G+  +G    A++
Sbjct: 490 QPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVE 549

Query: 190 M 190
           +
Sbjct: 550 L 550


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 226/495 (45%), Gaps = 52/495 (10%)

Query: 131 PDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKM 190
           PD + YN V+   +R      AL V+ EMV +  +PN +T++ +I+G  K G  E   ++
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 191 LDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCK 250
            D+M   G  PN  TY +++SGLC+  R DE   L  +M      PD   Y+ L +G  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 251 LRRVDEALALLRSFEKDGFVPRLGSYSC--LIDGLFRAKRYDEAYAWYRKMFEEKIEPDV 308
                  L+L     K G +  LG+Y+C  L++GL +  +  +A      +    + P  
Sbjct: 134 TGESRTMLSLFAESLKKGVM--LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191

Query: 309 VLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
           V+Y  +I G  +   ++ A  +   M+ R I PD   YNALI G C L ++ +A  L +E
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251

Query: 369 IWKRDSLPNTHTFTILI-----------C------------------------GMCRNGM 393
           + K    P+  TF  LI           C                          C+NG 
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQ 453
           + +A  + + M      P+  ++N++ID   ++G+ E+A LL  KM   KN  +   +  
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM---KNSGVSASI-- 366

Query: 454 GGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNIN 513
                    +   +++  C +  I +A +++  L   G  PD+++YN++I+  C  G+ +
Sbjct: 367 --------VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418

Query: 514 GALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
            AL+L +E+   G+RP   TY TL++ L    R  D   ++ QM      PS ++Y  ++
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478

Query: 574 TWSCRRRKFSLAFSL 588
               R    S   SL
Sbjct: 479 DAYVRCENDSKVASL 493



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/501 (23%), Positives = 240/501 (47%), Gaps = 16/501 (3%)

Query: 62  SFASNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESF 121
           +F+ N  +  +     G D   +  DE+    V      +  +I G+ K GD E      
Sbjct: 16  AFSYNVVIAGLWRSGKGSDA-LKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 122 GKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKS 181
            +M     +P++  YN +L+   R         +  EM   +  P+  T+S+L +GL+++
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 182 GKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAY 241
           G++   + +  E  ++G++   +T +I+++GLC+  +  +A ++   +  +G  P  V Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 242 NALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFE 301
           N L+NG+C++R +  A  +    +     P   +Y+ LI+GL + +   +A     +M +
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 302 EKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQ 361
             ++P V  +  +I     AG+++    +LSDM+++GI  D   + +++K FC  G + +
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 362 ARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALID 421
           A ++  ++  +D  PN   +  +I     +G  + A  L  KM+ +G   S+  +N L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 422 GLCKAGELEKANLLFYKME-IGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA 480
           GLC++ ++++A  L Y +   G  P              D  S  T++   C  G   KA
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRP--------------DVVSYNTIISACCNKGDTDKA 420

Query: 481 YKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLING 540
            ++L ++ + G  P + TY++L++     G ++    L++++  K + P S  YG +++ 
Sbjct: 421 LELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480

Query: 541 LQRVDREEDAFRIFGQMPQNG 561
             R + +     +  +M + G
Sbjct: 481 YVRCENDSKVASLKKEMSEKG 501



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 19/454 (4%)

Query: 78  GFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYN 137
           GF L  Q L +    N+      + VL+SG  + G  ++      +M      PD + Y+
Sbjct: 70  GFRLRDQMLHDGPKPNIVT----YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS 125

Query: 138 AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQR 197
            + +   R       L+++ E +K   +    T S+L+NGL K GK   A ++L+ +   
Sbjct: 126 ILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHT 185

Query: 198 GILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEA 257
           G++P    Y  +I+G CQ+     A+ +F +MK     PD + YNAL+NG CKL  V +A
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 245

Query: 258 LALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG 317
             L+   EK G  P + +++ LID    A + ++ +     M ++ I+ DV+ +G +++ 
Sbjct: 246 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 305

Query: 318 LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPN 377
             + GK+ +A+ +L DM  + + P+   YN++I  + + G  +QA  L  ++       +
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
             T+ +L+ G+CR+  +D+A++L   +   G  P V  +N +I   C  G+ +KA  L  
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 425

Query: 438 KM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDI 496
           +M + G  PTL               +  T+V    +AG +H    +  Q+      P  
Sbjct: 426 EMNKYGIRPTL--------------RTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSS 471

Query: 497 ITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
             Y  +++ + +  N +    L KE+  KG+  D
Sbjct: 472 SIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 211/460 (45%), Gaps = 20/460 (4%)

Query: 306 PDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSL 365
           PD   Y V+I GL  +GK  DA+K+  +M + G+VP+   YN +I G    G L+    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 366 QVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCK 425
           + ++      PN  T+ +L+ G+CR G +D+ + L ++M     FP    ++ L DGL +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 426 AGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
            GE  +  L  +   + K   L               +   ++   C  G + KA ++L 
Sbjct: 134 TGE-SRTMLSLFAESLKKGVML------------GAYTCSILLNGLCKDGKVAKAEQVLE 180

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            L  +G +P  + YN+LING+C+V ++ GA  +F++++ + +RPD +TY  LINGL +++
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 240

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
               A  +  +M ++G  PS   + +L+       +    F++     +     D  S  
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300

Query: 606 S-IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
           S ++ F + G++  A+  L +M +K        Y   +    + G  ++A  +   +   
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 360

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY--LLRSLLFSKDNK 722
               +  +   L+ GLC+   +D A +  +YTL+N   LRP V +Y  ++ +     D  
Sbjct: 361 GVSASIVTYNLLLKGLCRSSQIDEAEE-LIYTLRNQG-LRPDVVSYNTIISACCNKGDTD 418

Query: 723 KVHAYHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREME 762
           K  A  LL  M   G       Y    S L       +ME
Sbjct: 419 K--ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 36/251 (14%)

Query: 485 MQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRV 544
           M  +E    PD  +YN +I G  + G  + ALK+F E+   G+ P+ +TY T+I+G  + 
Sbjct: 5   MGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKG 64

Query: 545 DREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESM 604
              E  FR+  QM  +G  P+   Y  L++  CR                  +GR DE+ 
Sbjct: 65  GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCR------------------AGRMDETR 106

Query: 605 KSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVEC 664
             ++E         A   +    F         Y+I   GL + G+ +  L++F+  ++ 
Sbjct: 107 VLMDEM--------ASHSMFPDGFT--------YSILFDGLTRTGESRTMLSLFAESLKK 150

Query: 665 KAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKV 724
             ++   +C  L++GLCK G +  A  V    +  G +    + N L+      +D +  
Sbjct: 151 GVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG- 209

Query: 725 HAYHLLCRMKS 735
            A+ +  +MKS
Sbjct: 210 -AFCIFEQMKS 219



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 31/171 (18%), Positives = 76/171 (44%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I   ++    +  +  ++++++  VS     + +L+ G  +    ++A E    ++ 
Sbjct: 335 NSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 394

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              +PDV  YN +++    K     AL +  EM K    P + T+  L++ L+ +G+   
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPD 237
              +  +M  + + P+   Y I++    +     +   L  +M + G + D
Sbjct: 455 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 243/514 (47%), Gaps = 30/514 (5%)

Query: 116 KALESFGKMK-------EFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNI 168
           KAL + G++K       E    PDV  Y  +++          A+ +  EM       N 
Sbjct: 261 KALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 169 VTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLK 228
           V ++ +I  L   G+   A++++++M   G++ +   +T V+SG C+      A   F +
Sbjct: 321 VAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDE 380

Query: 229 MKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKR 288
           M+  G + D V Y AL+NG C+   + EA  +L+  E  G      +Y+ LIDG  +  +
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 289 YDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNA 348
             EA+  + KM ++++ P+VV Y  +  GL + G V  A +LL +M  +G+  + + YN+
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 349 LIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG 408
           LI G C  G L+QA    +++ +    P+ +T+T +I  +C++  +D A  L  +M   G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 409 CFPSVGMFNALIDGLCKAGELEKAN-LLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
             P++  +N L++G C +G +E    LL + +E   +P              +  +  ++
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP--------------NTTTYNSL 606

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           ++QYC    +    +I   +     +P+  TYN LI G CK  N+  AL    E+  KG 
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
           R  + +Y  LI  L +  +  +A R+F +M +   T  P VY   +  S          +
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLA 726

Query: 588 LW-----LQYLRDISGRDD---ESMKSIEEFLQK 613
           L      +  ++ I+  DD   E   SI  FL++
Sbjct: 727 LCDELVEVTLVKSIADTDDDFAEEHISIMRFLEE 760



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 238/536 (44%), Gaps = 57/536 (10%)

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A+++  E+ ++    N  +Y I++  LC   R  +A++LF +M      PD V Y  +++
Sbjct: 241 AVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIMVH 293

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G+C L  ++ A+ LL      G      +Y+ +I  L    +  +A      M    +  
Sbjct: 294 GYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVL 353

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
           D  ++  ++ G    G +  A     +M++RG+  D   Y ALI G C  G L +A  + 
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 367 VEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
            E+  +    +  T+T+LI G C+ G + +A  + NKM +    P+V  + AL DGLCK 
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 427 GELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILM 485
           G++  AN L ++M   G    +F              +  +++   C AG + +A + ++
Sbjct: 474 GDVCAANELLHEMCSKGLELNIF--------------TYNSLINGLCKAGNLEQAMRTMI 519

Query: 486 QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVD 545
            + E+G  PD+ TY ++I   C+   ++ A  L +E+  KG++P  VTY  L+NG     
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579

Query: 546 REEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMK 605
           R E   R+   M +    P+   Y SLM   C                       +++MK
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC----------------------IEKNMK 617

Query: 606 SIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECK 665
           S  E           +G+L  +   N+     Y I + G C+   +KEAL   S ++E  
Sbjct: 618 STTEI---------YKGMLSQEVVPNENT---YNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 666 AIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDN 721
             +T  S   LI  L K+     A  +F    K      P V N+ +  L F++DN
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI-DLSFNEDN 720



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 194/377 (51%), Gaps = 8/377 (2%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           ++VI++L          + ++++    V + + VF  ++SG+ + GD   A   F +M++
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
                D   Y A++N   R      A  V  EM       + VT+++LI+G  K GK   
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  + ++M Q+ + PN  TYT +  GLC+      A  L  +M   G   +   YN+L+N
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEP 306
           G CK   +++A+  +   ++ G  P + +Y+ +I  L ++K  D A++  ++M ++ I+P
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 307 DVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQ 366
            +V Y V++ G   +G+V+   +LL  M E+ I P+T  YN+L+K +C    +++     
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC----IEKNMKST 619

Query: 367 VEIWK----RDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDG 422
            EI+K    ++ +PN +T+ ILI G C+   + +A    ++M + G   +   +NALI  
Sbjct: 620 TEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRL 679

Query: 423 LCKAGELEKANLLFYKM 439
           L K  +  +A  LF KM
Sbjct: 680 LNKKKKFTEARRLFEKM 696



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 4/355 (1%)

Query: 32  TTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFASNSAVISMLLKPNGFDLYWQTLDELRS 91
           TTV S   +  +      +F    KR       + +A+I+ L +        + L E+  
Sbjct: 359 TTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMED 418

Query: 92  GNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLL 151
             + V +  + VLI GY KVG   +A     KM +    P+V  Y A+ +   ++     
Sbjct: 419 KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCA 478

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A  + +EM       NI T++ LINGL K+G  E A++ + +M + G+ P+ +TYT +I 
Sbjct: 479 ANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIG 538

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LCQ    D A+ L  +M D G  P  V YN L+NGFC   RV+    LL    +    P
Sbjct: 539 ALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ L+      K        Y+ M  +++ P+   Y ++I+G  +A  +K+A+   
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFH 658

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSL---PNTHTFTI 383
           S+M E+G       YNALI+         +AR L  E  +++ L   P+ + F I
Sbjct: 659 SEMIEKGFRLTASSYNALIRLLNKKKKFTEARRL-FEKMRKERLTAEPDVYNFYI 712



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 175/385 (45%), Gaps = 33/385 (8%)

Query: 330 LLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMC 389
           LL  +R+ GI P     NA++   C L L D+A  L  E+ ++    NT ++ IL+  +C
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPL-DEAVQLFQELPEK----NTCSYNILLKALC 264

Query: 390 RNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKME---IGKNPT 446
             G + DA +LF++M      P V  +  ++ G C   ELE A  L  +M    +  NP 
Sbjct: 265 TAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPV 321

Query: 447 LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGF 506
            +                 +++   C  G +  A +++  +   G + D   + ++++GF
Sbjct: 322 AY----------------TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGF 365

Query: 507 CKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSP 566
           C+ G++  A   F E+Q +GL  D VTY  LINGL R    ++A R+  +M   G     
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425

Query: 567 AVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFL-QKGEVENAIQGLLE 625
             Y  L+   C+  K + AF +  + ++     +  +  ++ + L ++G+V  A + L E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485

Query: 626 MDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGY 685
           M  K  +  +  Y   + GLC+ G +++A+     + E        +   +I  LC+   
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 686 LDLAMDVFLYTLKNGFILRPRVCNY 710
           LD A  +    L  G  ++P +  Y
Sbjct: 546 LDRAHSLLQEMLDKG--IKPTIVTY 568



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 11/288 (3%)

Query: 430 EKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAE 489
           E  N +  ++ + +   LF  L +      +  S   +++  CTAG I  A+++  ++A 
Sbjct: 227 ESCNAVLCRLPLDEAVQLFQELPE-----KNTCSYNILLKALCTAGRIKDAHQLFDEMAS 281

Query: 490 SGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREED 549
               PD++TY  +++G+C +  +  A+KL  E+  +GL  + V Y ++I  L    +  D
Sbjct: 282 P---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSD 338

Query: 550 AFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYL--RDISGRDDESMKSI 607
           A R+   M  +G     AV+ ++M+  CR+   + A + W   +  R ++         I
Sbjct: 339 AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN-WFDEMQKRGLAADGVTYTALI 397

Query: 608 EEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAI 667
               + GE++ A + L EM+ K  D     YT+ + G C+ G++ EA  + + +V+ +  
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457

Query: 668 VTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSL 715
               +   L  GLCK+G +  A ++       G  L     N L+  L
Sbjct: 458 PNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 232/507 (45%), Gaps = 52/507 (10%)

Query: 111 VGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVK--------- 161
           VG  E+A+E + ++KE   +  +   N++L+   +     L    Y EM+K         
Sbjct: 169 VGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANT 228

Query: 162 --LNCL--------------------------PNIVTFSLLINGLSKSGKTEVAIKMLDE 193
             + CL                          P   T++ LI G  ++       ++L  
Sbjct: 229 ETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHT 288

Query: 194 MTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRR 253
           M  R  LP  +TY  +I+GLC+     EAYR+F  +KD G +PD V Y  +++G C++  
Sbjct: 289 MIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGS 348

Query: 254 VDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGV 313
             EA  L       G  P   +Y+ ++ G  ++  ++ A   Y +M  +      V    
Sbjct: 349 FGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNK 408

Query: 314 MIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD 373
           +I  L   GK  +A ++   M E GI  D   YN+LI+GFC  G +D+  +L  E+  +D
Sbjct: 409 IISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQD 468

Query: 374 SLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKAN 433
             P+   + +LI   C++G  + A++L   M   G  P+   ++ ++ G  K+G+ E   
Sbjct: 469 PQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVR 528

Query: 434 LLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGN 492
            L+ +    G   T               A+   ++ + C+ G   +A ++  +++E+G 
Sbjct: 529 ELYNETCNKGYGTTT--------------ATCNKIISELCSRGKSDEASEMFKKMSETGI 574

Query: 493 LPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFR 552
             D ITYNSLI GFCK G +  ++ L  EL  +GL+P + +Y +LI  L +    E A R
Sbjct: 575 KADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKR 634

Query: 553 IFGQMPQNGCTPSPAVYKSLMTWSCRR 579
           ++G M   G  P   + + L++  C++
Sbjct: 635 LWGDMVSKGIEPHANLREHLISGLCKQ 661



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 240/516 (46%), Gaps = 16/516 (3%)

Query: 59  RLRSFASNSAVISMLLKPNGFDLYWQTLDEL-RSGNVS-VVSDVFFVLISGYYKVGDCEK 116
           R+   A NS ++S  LK    +L ++   E+ ++G  S   ++    LI  +   G   +
Sbjct: 188 RISIVACNS-ILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVAR 246

Query: 117 ALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIN 176
             E   +  +    P    YN ++    + + +     V + M+  N LP I T+  +IN
Sbjct: 247 GYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIIN 306

Query: 177 GLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSP 236
           GL K+ +   A ++ +++  RG  P++  YT +I GLC++    EA +L+ +M D G  P
Sbjct: 307 GLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQP 366

Query: 237 DFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWY 296
           +   YN +L+G  K    + A  L       G+     + + +I  L    + DEA+  +
Sbjct: 367 NAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVF 426

Query: 297 RKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDL 356
           +KM E  I+ D + Y  +IRG  + GKV + M LL+++  +   P    Y  LI   C  
Sbjct: 427 KKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKD 486

Query: 357 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMF 416
           G  + A+ L  ++  +   PN +T+  ++ G  ++G  +  ++L+N+    G   +    
Sbjct: 487 GDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC 546

Query: 417 NALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGL 476
           N +I  LC  G+ ++A+ +F KM            S+ G +  D  +  +++  +C  G 
Sbjct: 547 NKIISELCSRGKSDEASEMFKKM------------SETGIKA-DAITYNSLIRGFCKEGK 593

Query: 477 IHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGT 536
           + K+  +L +L   G  P   +Y SLI   C+ G+   A +L+ ++  KG+ P +     
Sbjct: 594 VGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREH 653

Query: 537 LINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           LI+GL +  R  +       M +N   P  A ++ L
Sbjct: 654 LISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 242/551 (43%), Gaps = 51/551 (9%)

Query: 152 ALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
           A+ VY+++ +     +IV  + +++G  K+GKTE+  +   EM + G   +  T T+   
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETV--- 231

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
                                GC         L+  FC   +V     LL  F K G  P
Sbjct: 232 ---------------------GC---------LIQAFCDSGQVARGYELLNQFLKTGLDP 261

Query: 272 RLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLL 331
              +Y+ LI G  +AK Y         M      P +  Y  +I GL +  +  +A ++ 
Sbjct: 262 GNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVF 321

Query: 332 SDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRN 391
           +D+++RG  PD   Y  +I G C++G   +AR L  E+  +   PN +T+  ++ G  ++
Sbjct: 322 NDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKS 381

Query: 392 GMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRL 451
           G  + A +L+N+M   G   +    N +I  LC  G+ ++A  +F KM            
Sbjct: 382 GDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM------------ 429

Query: 452 SQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGN 511
           S+ G +  D  +  +++  +C  G + +   +L +L      P +  Y  LI   CK G+
Sbjct: 430 SETGIQA-DAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGD 488

Query: 512 INGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKS 571
              A +L  ++  KGL P++ TY T+++G  +    E    ++ +    G   + A    
Sbjct: 489 FEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNK 548

Query: 572 LMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS-IEEFLQKGEVENAIQGLLEMDFKL 630
           +++  C R K   A  ++ +        D  +  S I  F ++G+V  ++  L E+  + 
Sbjct: 549 IISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608

Query: 631 NDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK--LIHGLCKRGYLDL 688
                + Y   +I LCQ+G  + A  ++  +V     + P + ++  LI GLCK+G    
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRLWGDMV--SKGIEPHANLREHLISGLCKQGRATE 666

Query: 689 AMDVFLYTLKN 699
            MD  +  L+N
Sbjct: 667 GMDRLMGMLEN 677



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 216/520 (41%), Gaps = 31/520 (5%)

Query: 234 CSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAY 293
           C+PD ++ N L       + V  A  ++R     GF+P   S    +  L      +EA 
Sbjct: 120 CTPDPISSNMLFEALLDAKAV-RAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAI 176

Query: 294 AWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPD--TYCYNALIK 351
             Y ++ E  I   +V    ++ G  +AGK +   +   +M + G   D  T     LI+
Sbjct: 177 EVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQ 236

Query: 352 GFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFP 411
            FCD G + +   L  +  K    P   T+  LI G C+        ++ + M      P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296

Query: 412 SVGMFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQ 470
           ++  +  +I+GLCK  E  +A  +F  + + G  P              D+    TM+  
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAP--------------DRVMYTTMIHG 342

Query: 471 YCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPD 530
            C  G   +A K+  ++ + G  P+  TYN++++G  K G+   A +L+ E+  KG    
Sbjct: 343 LCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTT 402

Query: 531 SVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWL 590
           +VT   +I+ L    + ++AF +F +M + G       Y SL+   C+  K     +L  
Sbjct: 403 TVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNL-- 460

Query: 591 QYLRDISGRDDESMKSIEEFL-----QKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGL 645
             L ++  +D +   S+ E L     + G+ E A + L +M  K        Y   L G 
Sbjct: 461 --LNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGS 518

Query: 646 CQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRP 705
            + G  +    +++         T  +C K+I  LC RG  D A ++F    + G     
Sbjct: 519 LKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADA 578

Query: 706 RVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
              N L+R   F K+ K   + +LL  + + G    A  Y
Sbjct: 579 ITYNSLIRG--FCKEGKVGKSMNLLNELVAQGLQPSASSY 616



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 158/393 (40%), Gaps = 70/393 (17%)

Query: 104 LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLN 163
           +I+G  K  +C +A   F  +K+    PD  +Y  +++       F  A  +++EM+   
Sbjct: 304 IINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKG 363

Query: 164 CLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAY 223
             PN  T++ +++G  KSG  E A ++ +EM  +G      T   +IS LC   ++DEA+
Sbjct: 364 MQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAF 423

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGF----------------------------------- 248
            +F KM ++G   D + YN+L+ GF                                   
Sbjct: 424 EVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKS 483

Query: 249 CKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRY------------------- 289
           CK    + A  LL      G  P   +Y  ++ G  ++  +                   
Sbjct: 484 CKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTT 543

Query: 290 ----------------DEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSD 333
                           DEA   ++KM E  I+ D + Y  +IRG  + GKV  +M LL++
Sbjct: 544 ATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNE 603

Query: 334 MRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGM 393
           +  +G+ P    Y +LI   C  G  + A+ L  ++  +   P+ +    LI G+C+ G 
Sbjct: 604 LVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGR 663

Query: 394 VDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKA 426
             +       M +    P    F  L + L ++
Sbjct: 664 ATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 186/437 (42%), Gaps = 42/437 (9%)

Query: 340 VPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDS---LPNTHTFTILICGMCRNGMVDD 396
            PD    N L +   D      A++++     RD    +P++ +    +  +C  G +++
Sbjct: 121 TPDPISSNMLFEALLD------AKAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEE 174

Query: 397 AQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF-YKMEIGKNPTLFLRLSQGG 455
           A +++ ++++AG   S+   N+++ G  KAG+ E   LLF +  E+         +  G 
Sbjct: 175 AIEVYFQLKEAGIRISIVACNSILSGCLKAGKTE---LLFEFYQEM---------IKAGT 222

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
               +  ++  +++ +C +G + + Y++L Q  ++G  P   TYN LI GFC+  N    
Sbjct: 223 ASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASM 282

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
            ++   +  +   P   TY  +INGL + +   +A+R+F  +   G  P   +Y +++  
Sbjct: 283 SEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHG 342

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKS--------IEEFLQKGEVENAIQGLLEMD 627
            C    F  A  LW + +       D+ M+         +   L+ G+ E A +   EM 
Sbjct: 343 LCEMGSFGEARKLWFEMM-------DKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMC 395

Query: 628 FKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLD 687
            K            +  LC  G+  EA  +F  + E        +   LI G CK G +D
Sbjct: 396 NKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVD 455

Query: 688 LAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPK 747
             M++    +      +P V  Y L  +   KD     A  LL  M S G   +A  Y  
Sbjct: 456 ERMNLLNELVAQD--PQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTY-- 511

Query: 748 TKSLLPGPWNTREMENM 764
             ++L G   + + E++
Sbjct: 512 -DTMLHGSLKSGDFEHV 527



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 35/256 (13%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +++I    K    D     L+EL + +      ++ +LI    K GD E A    G M  
Sbjct: 442 NSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSS 501

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYE---------------------------- 158
               P+ Y Y+ +L+ + +   F     +Y E                            
Sbjct: 502 KGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDE 561

Query: 159 -------MVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVIS 211
                  M +     + +T++ LI G  K GK   ++ +L+E+  +G+ P+  +Y  +I 
Sbjct: 562 ASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLII 621

Query: 212 GLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVP 271
            LCQ   A+ A RL+  M   G  P       L++G CK  R  E +  L    ++   P
Sbjct: 622 QLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681

Query: 272 RLGSYSCLIDGLFRAK 287
           +  ++  L + L +++
Sbjct: 682 KKAAFEDLAECLIQSE 697


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 224/455 (49%), Gaps = 19/455 (4%)

Query: 89  LRSGNVS-VVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFR 145
           LRS   S V +DV  +  LI G     + + ALE   +M     QP+V +Y+ +L    R
Sbjct: 146 LRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCR 205

Query: 146 KQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT 205
              +     V+ +M +    P+++ F+ LI+ L K GKT  A K+ D M QRG+ PN  T
Sbjct: 206 SGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVT 265

Query: 206 YTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS-F 264
           Y ++I+ LC+     EA  L  +M D G +PD V YN L+ G   +  +DEA++ L    
Sbjct: 266 YNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMI 325

Query: 265 EKDGFV-PRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
           + D  V P + +++ +I GL +  R  +A      M E     ++V Y  +I G     K
Sbjct: 326 QGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHK 385

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTI 383
           VK AM L+ ++   G+ PD++ Y+ LI GF  +  +D+A      + +R        +  
Sbjct: 386 VKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIP 445

Query: 384 LICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGK 443
           L+  MC+ GM++ A  LFN+M+K  C      ++ +I G CK+G+++    L   M    
Sbjct: 446 LLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDM---- 500

Query: 444 NPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLI 503
                  L +G     D  +   ++  Y   G + +A ++L Q+  SG +PD+  ++SLI
Sbjct: 501 -------LDEG--LAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551

Query: 504 NGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLI 538
            G+   G  +  LKL  E++ K +  D     T+I
Sbjct: 552 KGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 223/460 (48%), Gaps = 16/460 (3%)

Query: 116 KALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLI 175
           +A+     M+    + DV  Y  ++           AL +  EM      PN+V +S L+
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 176 NGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCS 235
            G  +SG+ +   K+ ++M++RGI P+   +T +I  LC+  +  +A ++   M   G  
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 236 PDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           P+ V YN L+N  CK   V EAL L +  +  G  P + +Y+ LI GL      DEA ++
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 296 YRKMFEEK--IEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGF 353
             +M +    +EPDVV +  +I GL + G++  A+K+   M ERG + +   YN LI GF
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 354 CDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSV 413
             +  +  A +L  E+      P++ T++ILI G  +   VD A+K    M + G    +
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 414 GMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
             +  L+  +C+ G +E+A  LF +M+  KN  L            D  +  TM+   C 
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMD--KNCGL------------DAIAYSTMIHGACK 486

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +G +    +++  + + G  PD +TY+ LIN + K+G++  A ++ K++   G  PD   
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAV 546

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLM 573
           + +LI G     + +   ++  +M        P +  +++
Sbjct: 547 FDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 218/436 (50%), Gaps = 33/436 (7%)

Query: 166 PNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 225
           PN V+++ ++ GL  S +T  A+ +L  M   G+  +  TY  +I GLC  +  D A  L
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 226 FLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFR 285
             +M  SG  P+ V Y+ LL G+C+  R  +   +     + G  P +  ++ LID L +
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 286 AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYC 345
             +  +A      M +  +EP+VV Y V+I  L + G V++A+ L  +M ++G+ PD   
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300

Query: 346 YNALIKGFCDLGLLDQARSLQVEIWKRDSL--PNTHTFTILICGMCRNGMVDDAQKLFNK 403
           YN LI G   +  +D+A S   E+ + D++  P+  TF  +I G+C+ G +  A K+   
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKA-NLL---------------------FYKM-E 440
           M + GC  ++  +N LI G  +  +++ A NL+                     F KM E
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420

Query: 441 IGKNPTLFLRLSQGGNRV---HDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
           + +       + Q G +    H    L  M    C  G++ +A  +  ++ ++  L D I
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAM----CQQGMMERAMGLFNEMDKNCGL-DAI 475

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            Y+++I+G CK G++    +L +++  +GL PD+VTY  LIN   ++   E+A R+  QM
Sbjct: 476 AYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQM 535

Query: 558 PQNGCTPSPAVYKSLM 573
             +G  P  AV+ SL+
Sbjct: 536 TASGFVPDVAVFDSLI 551



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 233/544 (42%), Gaps = 53/544 (9%)

Query: 202 NKFTYTIVISGLCQI--NRADEAYRLFLKMK---DSGCSPDFVAYNALLNGFCKLRRVDE 256
           +  +Y  V++ LC+   +   +A  L + M         P+ V+Y  ++ G C  RR  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 257 ALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIR 316
           A+ALLRS +  G    + +Y  LI GL  A   D A     +M    ++P+VV+Y  ++R
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 317 GLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLP 376
           G   +G+ +D  K+  DM  RGI PD   +  LI   C  G   +A  ++  + +R   P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 377 NTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLF 436
           N  T+ +LI  +C+ G V +A  L  +M+  G  P V  +N LI GL    E+++A    
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 437 YKMEIGKNPTLFLRLSQGGNRVH-DKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPD 495
            +M             QG   V  D  +  +++   C  G + +A K+   +AE G + +
Sbjct: 322 EEM------------IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCN 369

Query: 496 IITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFG 555
           ++TYN LI GF +V  +  A+ L  EL + GL PDS TY  LING  ++   + A +   
Sbjct: 370 LVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLC 429

Query: 556 QMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE 615
            M Q G       Y  L+   C                                  Q+G 
Sbjct: 430 TMRQRGIKAELFHYIPLLAAMC----------------------------------QQGM 455

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK 675
           +E A+    EMD K        Y+  + G C+ G +K    +   +++        +   
Sbjct: 456 MERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSM 514

Query: 676 LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKS 735
           LI+   K G L+ A  V      +GF+    V + L++         KV       R K+
Sbjct: 515 LINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKN 574

Query: 736 VGYD 739
           V +D
Sbjct: 575 VAFD 578



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 3/268 (1%)

Query: 86  LDELRSGNVSVVSDV--FFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIA 143
           L+E+  G+  V  DV  F  +I G  K+G   +A++    M E  C  ++  YN ++   
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 144 FRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNK 203
            R     +A+ +  E+      P+  T+S+LING SK  + + A K L  M QRGI    
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 204 FTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRS 263
           F Y  +++ +CQ    + A  LF +M D  C  D +AY+ +++G CK   +     L++ 
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 264 FEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGK 323
              +G  P   +YS LI+   +    +EA    ++M      PDV ++  +I+G S  G+
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQ 559

Query: 324 VKDAMKLLSDMRERGIVPDTYCYNALIK 351
               +KL+ +MR + +  D    + +I+
Sbjct: 560 TDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 17/335 (5%)

Query: 416 FNALIDGLCKAG--ELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCT 473
           +N ++  LC+ G   L +A  L   M    +P              +  S  T++   C 
Sbjct: 86  YNTVLAALCRRGGDHLRQARSLLVDMSREAHPAAR----------PNAVSYTTVMRGLCA 135

Query: 474 AGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVT 533
           +    +A  +L  +  SG   D++TY +LI G C    ++ AL+L  E+   G++P+ V 
Sbjct: 136 SRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVV 195

Query: 534 YGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLW-LQY 592
           Y  L+ G  R  R +D  ++F  M + G  P   ++  L+   C+  K   A  +  +  
Sbjct: 196 YSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMV 255

Query: 593 LRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVK 652
            R +          I    ++G V  A+    EMD K     +  Y   + GL    ++ 
Sbjct: 256 QRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315

Query: 653 EALNIFSVLVECKAIVTPPSCV--KLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
           EA++    +++   +V P       +IHGLCK G +  A+ V     + G +      NY
Sbjct: 316 EAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNY 375

Query: 711 LLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
           L+    F + +K   A +L+  +   G + D+  Y
Sbjct: 376 LIGG--FLRVHKVKMAMNLMDELAISGLEPDSFTY 408



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/273 (20%), Positives = 133/273 (48%), Gaps = 5/273 (1%)

Query: 5   LNEVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKTKNPQVGFRFFIWAAKRKRLRSFA 64
           ++E ++ L+ +   +  +EP    ++  +V   + K        +     A+R  + +  
Sbjct: 314 MDEAMSFLEEMIQGDTVVEP--DVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLV 371

Query: 65  SNSAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKM 124
           + + +I   L+ +   +    +DEL    +   S  + +LI+G+ K+ + ++A +    M
Sbjct: 372 TYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTM 431

Query: 125 KEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKT 184
           ++   + +++ Y  +L    ++ +   A+ ++ EM K NC  + + +S +I+G  KSG  
Sbjct: 432 RQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDM 490

Query: 185 EVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNAL 244
           +   +++ +M   G+ P+  TY+++I+   ++   +EA R+  +M  SG  PD   +++L
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550

Query: 245 LNGFCKLRRVDEALALLRSFEKD--GFVPRLGS 275
           + G+    + D+ L L+         F P++ S
Sbjct: 551 IKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 240/541 (44%), Gaps = 52/541 (9%)

Query: 85  TLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAF 144
            L  +R G  +        L+   ++ G+   A + F +M     +P + I+NA++    
Sbjct: 162 VLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFC 221

Query: 145 RKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKF 204
            + L  + L +   M + N +P+  ++++LI G S  G+   A ++LDEM + G  P   
Sbjct: 222 HRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVV 281

Query: 205 TYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSF 264
           TY I+++ LC      +A RLF +M   G   + + +N L++G+ K  R+DEA A  R  
Sbjct: 282 TYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREM 341

Query: 265 EKDGFVPRLGSYSCLIDGLFR---AKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEA 321
           +  G VP   +++ L  G ++   A +         +MF  +I  D V   +++  L   
Sbjct: 342 KARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSV--DMVVCRLCWD 399

Query: 322 GKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTF 381
           G++ DA KL+    E+G+      +NAL+  +   G  +QA  +   + K   +P++ TF
Sbjct: 400 GRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTF 459

Query: 382 TILICGMCRNGMVDDAQ----------------------------------KLFNKMEKA 407
             LI G+C  G +DDAQ                                  K ++ M K 
Sbjct: 460 NYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKV 519

Query: 408 GCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTM 467
           G  P    F+A I GLC+   + +A   F +M              G   V +  +  ++
Sbjct: 520 GVQPDFIAFSAYISGLCRLDHVNEAYQAFVEM-------------TGRGFVPNNITYNSL 566

Query: 468 VEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGL 527
           +  +C  G + +A K+  ++ +SG +PD+ T N LI+GFCK G ++   K F ++   GL
Sbjct: 567 ISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGL 626

Query: 528 RPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFS 587
            PD VTY T+IN          A     +M  +GC P    Y   M   C     + A  
Sbjct: 627 TPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVK 686

Query: 588 L 588
           +
Sbjct: 687 M 687



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 170/699 (24%), Positives = 284/699 (40%), Gaps = 97/699 (13%)

Query: 105 ISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNC 164
           +  +   G   +AL     ++     P +    A+L + FR      A  V+ EM     
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206

Query: 165 LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYR 224
            P++  F+ +I G    G   + + +L  M +  ++P+  +Y I+I G     +A +A++
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQ 266

Query: 225 LFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLF 284
           L  +M++SGC P  V YN L+N  C    + +A  L     K G      +++ L+DG  
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYA 326

Query: 285 RAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRG--------------------------- 317
           +A R DEAYA  R+M    + PD   + ++  G                           
Sbjct: 327 KAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISA 386

Query: 318 ---------LSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVE 368
                    L   G++ DA KL+    E+G+      +NAL+  +   G  +QA  +   
Sbjct: 387 DSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSV 446

Query: 369 IWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAG-CFPSVGMFNALIDGLCKAG 427
           + K   +P++ TF  LI G+C  G +DDAQ L   M   G C  +   F   +D   ++G
Sbjct: 447 MNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGTS--FTIYMDSYFRSG 504

Query: 428 ELEKANLLFYKM-EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQ 486
            +E A   +  M ++G  P              D  +    +   C    +++AY+  ++
Sbjct: 505 NVEGALKCWDDMVKVGVQP--------------DFIAFSAYISGLCRLDHVNEAYQAFVE 550

Query: 487 LAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDR 546
           +   G +P+ ITYNSLI+ FC+VG ++ ALKL K+++  GL PD  T   LI+G  +  R
Sbjct: 551 MTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGR 610

Query: 547 EEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKS 606
            +   + F  M  +G TP    Y +++   C  +  S A     + L D    D      
Sbjct: 611 LDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPD------ 664

Query: 607 IEEFLQKGEVENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKA 666
                                       +  Y IW+  LC +  +  A+ +   LV    
Sbjct: 665 ----------------------------IFTYNIWMHSLCNNHLLNRAVKMLDELVAMGC 696

Query: 667 IVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHA 726
           +    +   L+ G+C    LD AM +    +K  F       N            K+   
Sbjct: 697 MPNSVTYNTLMDGICS-DVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALV 755

Query: 727 YHLLCRMKSVGYDLDACLYPKTKSLLPGPWNTREMENMS 765
           +    +  SV +D DA     T ++L   W  +EME+ S
Sbjct: 756 WAEKLKEDSVAFD-DA-----TMNIL--DWAYKEMEDDS 786



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 4/365 (1%)

Query: 69  VISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFD 128
           V+  L      D  W+ +       V V    F  L++ Y K G  E+ALE +  M +  
Sbjct: 392 VVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIG 451

Query: 129 CQPDVYIYN-AVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVA 187
             P    +N  ++ +  + +L    L + + + K  C+    +F++ ++   +SG  E A
Sbjct: 452 LVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT--SFTIYMDSYFRSGNVEGA 509

Query: 188 IKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNG 247
           +K  D+M + G+ P+   ++  ISGLC+++  +EAY+ F++M   G  P+ + YN+L++ 
Sbjct: 510 LKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISA 569

Query: 248 FCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPD 307
           FC++  V EAL L +   + G +P + + + LIDG  +  R D     +  M+   + PD
Sbjct: 570 FCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPD 629

Query: 308 VVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQV 367
           VV Y  +I     A  +  AM  ++ M   G  PD + YN  +   C+  LL++A  +  
Sbjct: 630 VVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLD 689

Query: 368 EIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAG 427
           E+     +PN+ T+  L+ G+C + ++D A  L  K+ K    P+    N      CK G
Sbjct: 690 ELVAMGCMPNSVTYNTLMDGICSD-VLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQG 748

Query: 428 ELEKA 432
             ++A
Sbjct: 749 FGKRA 753


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 272/587 (46%), Gaps = 54/587 (9%)

Query: 202 NKFTYTIVISGLCQINRADEAYRLFLKM---KDSGCSPDFVAYNALLNGFCKLRRVDEAL 258
           N+ TY+ V+ GLC+  + ++A  LFL+    KD G  P  V++N++++G+CKL  VD A 
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIG--PSVVSFNSIMSGYCKLGFVDMAK 255

Query: 259 ALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGL 318
           +   +  K G VP + S++ LI+GL       EA      M +  +EPD V Y ++ +G 
Sbjct: 256 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 315

Query: 319 SEAGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRD-SLPN 377
              G +  A +++ DM ++G+ PD   Y  L+ G C LG +D    L  ++  R   L +
Sbjct: 316 HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS 375

Query: 378 THTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
               ++++ G+C+ G +D+A  LFN+M+  G  P +  ++ +I GLCK G+ + A  L+ 
Sbjct: 376 IIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 435

Query: 438 KM-------EIGKNPTLFLRLSQGGNRVHDKASLQTM---------------VEQYCTAG 475
           +M           +  L L L Q G  +  ++ L ++               ++ Y  +G
Sbjct: 436 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 495

Query: 476 LIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYG 535
            I +A ++   + E+G  P + T+NSLI G+CK  NI  A K+   ++L GL P  V+Y 
Sbjct: 496 CIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYT 555

Query: 536 TLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF--------SLAFS 587
           TL++        +    +  +M   G  P+   Y  +    CR  K            F 
Sbjct: 556 TLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 615

Query: 588 LWLQYLRDISGR----DDESMKSIEEFLQKGEVENAIQGLLEMDFKLN-DFQLAPYTIWL 642
              Q LRD+       D  +  +I ++L + +  +     LE+    N D   A Y I +
Sbjct: 616 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 675

Query: 643 IGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLYTLKNGFI 702
             LC  G +++A +    L E    ++  +   LI   C +G  ++A+ +F   L  GF 
Sbjct: 676 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 735

Query: 703 LRPR----VCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGY--DLDAC 743
           +  R    V N L R  L ++           C M S G   DLD C
Sbjct: 736 VSIRDYSAVINRLCRRHLVNESK------FFFCLMLSQGISPDLDIC 776



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 224/480 (46%), Gaps = 4/480 (0%)

Query: 103 VLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKL 162
           +LI+G   VG   +ALE    M +   +PD   YN +        +   A  V  +M+  
Sbjct: 275 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 334

Query: 163 NCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFT-YTIVISGLCQINRADE 221
              P+++T+++L+ G  + G  ++ + +L +M  RG   N     ++++SGLC+  R DE
Sbjct: 335 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 394

Query: 222 AYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLID 281
           A  LF +MK  G SPD VAY+ +++G CKL + D AL L         +P   ++  L+ 
Sbjct: 395 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 454

Query: 282 GLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVP 341
           GL +     EA +    +       D+VLY ++I G +++G +++A++L   + E GI P
Sbjct: 455 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 514

Query: 342 DTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLF 401
               +N+LI G+C    + +AR +   I      P+  ++T L+      G      +L 
Sbjct: 515 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 574

Query: 402 NKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDK 461
            +M+  G  P+   ++ +  GLC+  + E  N +  +  I +     LR  +      D+
Sbjct: 575 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL-RERIFEKCKQGLRDMESEGIPPDQ 633

Query: 462 ASLQTMVEQYCTAGLIHKAYKILMQLAESGNL-PDIITYNSLINGFCKVGNINGALKLFK 520
            +  T+++  C    +  A+ + +++ +S NL     TYN LI+  C  G I  A     
Sbjct: 634 ITYNTIIQYLCRVKHLSGAF-VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 692

Query: 521 ELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRR 580
            LQ + +      Y TLI         E A ++F Q+   G   S   Y +++   CRR 
Sbjct: 693 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRH 752



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 218/500 (43%), Gaps = 32/500 (6%)

Query: 98  SDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYY 157
           S  + +L  G++ +G    A E    M +    PDV  Y  +L    +     + L +  
Sbjct: 305 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 364

Query: 158 EMVKLNC-LPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQI 216
           +M+     L +I+  S++++GL K+G+ + A+ + ++M   G+ P+   Y+IVI GLC++
Sbjct: 365 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 424

Query: 217 NRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSY 276
            + D A  L+ +M D    P+   + ALL G C+   + EA +LL S    G    +  Y
Sbjct: 425 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 484

Query: 277 SCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRE 336
           + +IDG  ++   +EA   ++ + E  I P V  +  +I G  +   + +A K+L  ++ 
Sbjct: 485 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 544

Query: 337 RGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDD 396
            G+ P    Y  L+  + + G       L+ E+      P   T++++  G+CR    ++
Sbjct: 545 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 604

Query: 397 A-----QKLFNK-------MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKN 444
                 +++F K       ME  G  P    +N +I  LC+   L  A            
Sbjct: 605 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA------------ 652

Query: 445 PTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             +FL + +  N     A+   +++  C  G I KA   +  L E         Y +LI 
Sbjct: 653 -FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 711

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             C  G+   A+KLF +L  +G       Y  +IN L R     ++   F  M   G +P
Sbjct: 712 AHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 771

Query: 565 SPAVYK------SLMTWSCR 578
              + +       L++W+ +
Sbjct: 772 DLDICEVMIKSDELLSWTIK 791



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 24/260 (9%)

Query: 95  SVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVL------------NI 142
           SVVS  +  L+  Y   G+ +   E   +MK     P    Y+ +             N 
Sbjct: 550 SVVS--YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNH 607

Query: 143 AFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPN 202
             R+++F        +M      P+ +T++ +I  L +      A   L+ M  R +  +
Sbjct: 608 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 667

Query: 203 KFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLR 262
             TY I+I  LC      +A      +++   S    AY  L+   C     + A+ L  
Sbjct: 668 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 727

Query: 263 SFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG 322
                GF   +  YS +I+ L R    +E+  ++  M  + I PD+ +  VMI+      
Sbjct: 728 QLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIK------ 781

Query: 323 KVKDAMKLLSDMRERGIVPD 342
               + +LLS   + G++PD
Sbjct: 782 ----SDELLSWTIKWGLLPD 797


>gi|449458001|ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 920

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 177/705 (25%), Positives = 304/705 (43%), Gaps = 92/705 (13%)

Query: 42  KNPQVGFRFFIWAAKRKRLRSFASNSAVISMLL------------------KPNGFDLYW 83
           + P++ F FF    +R    + ++ +A+I +L                   K   FD+  
Sbjct: 71  REPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGSKKVEFDV-- 128

Query: 84  QTLDELRSGNVSVVSDVFFV-----LISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNA 138
             LD + S N   V D  F+     LI  Y  V   +  ++   ++      P ++  N 
Sbjct: 129 --LDLIESLNQGCVVDASFIRVYDALIKAYVSVNLFDSVVDLLFRLGRKGFVPHIFTCNY 186

Query: 139 VLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRG 198
           +LN         +AL VY ++ +  C PN  T++ +I GL K GK E AI + +EM+  G
Sbjct: 187 LLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKIGKMEKAIDIFEEMSGYG 246

Query: 199 ILPNKFT-----------------------------------YTIVISGLCQINRADEAY 223
           ++PN F                                    YT+VI G C   + DEA 
Sbjct: 247 MVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAELFPIDTYAYTVVIRGFCDEMKIDEAE 306

Query: 224 RLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGL 283
            +FL M++ G  PD   Y  L+NG+CK   + +AL+L       G        S ++   
Sbjct: 307 SVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFILQCF 366

Query: 284 FRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIVPDT 343
            R + Y E    ++    + +  D V+Y +++  L E GK+++A++LL +M  R I  D 
Sbjct: 367 LRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLEEAIELLEEMTSRQIQMDV 426

Query: 344 YCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNK 403
             Y  +IKG    G + +A  +   + K    P++ T+++L  G  RNG+V   Q L + 
Sbjct: 427 MHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDY 486

Query: 404 MEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPT----------------- 446
           ME+ G      M + +I+ LC  G++++A  +F  +E+                      
Sbjct: 487 MEEHGLRKDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAASDTKSA 546

Query: 447 --LFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLIN 504
             LF+ LS+ G  +  ++SL  +V + C      +A +++ QL         I YN +I 
Sbjct: 547 YKLFVNLSKEGIFIR-RSSLVRLVSRLCMENSSFRAIEVMKQLPVMNVEAKEIVYNKVIA 605

Query: 505 GFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTP 564
             C+V N+  A  LF  L   GL PD +TY  +ING  +++   +A+ +   M   G  P
Sbjct: 606 SLCRVKNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYELLCDMRNRGREP 665

Query: 565 SPAVYKSLMT-------WSCRRRKFSLAFSLWLQYLRDISGRDDESMKS--IEEFLQKGE 615
              VY  L+          C   + +L  S++ + ++D+    D    +  I+ + +   
Sbjct: 666 DIFVYTVLLDGGFKTSLQKCSSVEIALTSSIFNE-MKDMKITPDVVYYTVLIDGYCKMNN 724

Query: 616 VENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSV 660
           + +A     EM  +  +     YT  L   C++G  ++A  +FSV
Sbjct: 725 LNDAFVLFEEMVDQGIEADAVTYTALLSSCCRNGYKEKAQTLFSV 769



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/481 (21%), Positives = 196/481 (40%), Gaps = 74/481 (15%)

Query: 292 AYAWYRKMFEEKIEPDVVLYGVMIRGLSEAG----------------KVK-DAMKLLSDM 334
           A++++ ++ E   + ++  Y  +IR L   G                KV+ D + L+  +
Sbjct: 76  AFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLIGSKKVEFDVLDLIESL 135

Query: 335 RERGIVPDTY--CYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 392
            +  +V  ++   Y+ALIK +  + L D    L   + ++  +P+  T   L+  +  +G
Sbjct: 136 NQGCVVDASFIRVYDALIKAYVSVNLFDSVVDLLFRLGRKGFVPHIFTCNYLLNRLIEHG 195

Query: 393 MVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 452
            ++ A  ++ ++++ GC P+   +  +I GLCK G++EKA  +F +M             
Sbjct: 196 KMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKIGKMEKAIDIFEEM------------- 242

Query: 453 QGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNI 512
            G   V +  +    +E  CT       Y++L          D   Y  +I GFC    I
Sbjct: 243 SGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAELFPIDTYAYTVVIRGFCDEMKI 302

Query: 513 NGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSL 572
           + A  +F +++  G+ PD+ TYG LING  +    + A  +   M   G   +  +   +
Sbjct: 303 DEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSKGIKSNCVIVSFI 362

Query: 573 MTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGE-VENAIQGLLEMDFKLN 631
           +    R + +S                  E +   + F  KG  ++N +           
Sbjct: 363 LQCFLRMQMYS------------------EVVNQFKVFQGKGVFLDNVV----------- 393

Query: 632 DFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMD 691
                 Y I +  LC+ G+++EA+ +   +   +  +       +I GL  +G +  AM 
Sbjct: 394 ------YNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMIKGLFAQGKIHEAMM 447

Query: 692 VFLYTLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLYPKTKSL 751
           +F    KNG  + P    Y + +  FS++        LL  M+  G   D    PK   L
Sbjct: 448 MFENLKKNG--VEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKD----PKMPDL 501

Query: 752 L 752
           +
Sbjct: 502 I 502


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 248/544 (45%), Gaps = 60/544 (11%)

Query: 102 FVLISGYY-KVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMV 160
           F L+ GYY + GD  +A ++F  M+     P  ++Y ++++     +    AL+   +M 
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMN 356

Query: 161 KLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIVISGLCQINRAD 220
           +     ++VT+S+++ G +K G  E A     +  +R    N + Y  +I   CQ    D
Sbjct: 357 EEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMD 416

Query: 221 EAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLI 280
            A  L  +M++ G       Y+ +++G+  +R  ++ L + +  ++ GF P + +Y CLI
Sbjct: 417 RAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLI 476

Query: 281 DGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDAMKLLSDMRERGIV 340
           +   +  +  +A    + M    I+ ++  Y ++I G  +     +A  +  D+ + G+ 
Sbjct: 477 NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLK 536

Query: 341 PDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKL 400
           PD   YN +IK FC +G +D+A  +  E+ K    P + TF  +I G  R G +  A ++
Sbjct: 537 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEI 596

Query: 401 FNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKM--------------------- 439
           F+ M ++GC P+V  FNAL+ GL +  ++EKA  +  +M                     
Sbjct: 597 FDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAA 656

Query: 440 --EIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKA----------------- 480
             + GK    F ++   G ++ D  + + +++  C +G +  A                 
Sbjct: 657 LGDTGKAFEYFTKMRNEGLQL-DVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTF 715

Query: 481 -YKILM-----------------QLAESGNLPDIITYNSLINGFCKVGNINGALKLFKEL 522
            Y IL+                 Q+ + G  PDI TY S IN  CK G++  A K  +E+
Sbjct: 716 VYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEM 775

Query: 523 QLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTWSCRRRKF 582
           +  G++P+  TY TLI+G       E A   F ++   G  P  AVY  LMT    R   
Sbjct: 776 EAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATV 835

Query: 583 SLAF 586
           + A+
Sbjct: 836 AEAY 839



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 193/454 (42%), Gaps = 48/454 (10%)

Query: 88  ELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQ 147
           E+    +    D++  ++ GY  + + EK L  F ++KE    P V  Y  ++N+  +  
Sbjct: 424 EMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIG 483

Query: 148 LFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYT 207
               AL V   M  +    N+ T+S+LING  K      A  + +++ + G+ P+   Y 
Sbjct: 484 KVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYN 543

Query: 208 IVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKD 267
            +I   C +   D A  +  +M+   C P    +  +++GF +   +  AL +     + 
Sbjct: 544 NIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603

Query: 268 GFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
           G +P + +++ L+ GL   ++ ++A     +M    + PD   Y  ++ G +  G    A
Sbjct: 604 GCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKA 663

Query: 328 MKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICG 387
            +  + MR  G+  D + Y AL+K  C  G +  A ++  E+  +    NT  + ILI G
Sbjct: 664 FEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDG 723

Query: 388 MCRNGMVDDAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTL 447
             R G + +A  L  +M + G  P +  + + I+  CKAG++ +A     +ME       
Sbjct: 724 WARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEA------ 777

Query: 448 FLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFC 507
                                                     +G  P++ TY +LI+G+ 
Sbjct: 778 ------------------------------------------AGVKPNVKTYTTLIHGWA 795

Query: 508 KVGNINGALKLFKELQLKGLRPDSVTYGTLINGL 541
                  AL  F+EL+L GL+PD   Y  L+  L
Sbjct: 796 NASLPEKALSCFEELKLAGLKPDKAVYHCLMTSL 829



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/517 (20%), Positives = 215/517 (41%), Gaps = 63/517 (12%)

Query: 201 PNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALAL 260
           P++  + +++    +      A + F  M+  G  P    Y +L++ +   R ++EAL+ 
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351

Query: 261 LRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSE 320
           +R   ++G    L +YS ++ G  +    + A  W++K  E     +  +YG +I    +
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411

Query: 321 AGKVKDAMKLLSDMRERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHT 380
           A  +  A  L+ +M E GI      Y+ ++ G+                           
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYT-------------------------- 445

Query: 381 FTILICGMCRNGMVDDAQK---LFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFY 437
                       M+ + +K   +F ++++ G  PSV  +  LI+   K G++ KA     
Sbjct: 446 ------------MIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKA----- 488

Query: 438 KMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDII 497
            +E+ K       + +     H+  +   ++  +        A+ +   + + G  PD++
Sbjct: 489 -LEVSK-------MMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVV 540

Query: 498 TYNSLINGFCKVGNINGALKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQM 557
            YN++I  FC +GN++ A+ + KE+Q +  RP S T+  +I+G  R      A  IF  M
Sbjct: 541 LYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMM 600

Query: 558 PQNGCTPSPAVYKSLMTWSCRRRKFSLAFSLWLQYLRDISGRDDESMKSI-EEFLQKGEV 616
            ++GC P+   + +L+     +RK   A  +  +        D+ +  +I   +   G+ 
Sbjct: 601 RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDT 660

Query: 617 ENAIQGLLEMDFKLNDFQLAPYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVK- 675
             A +   +M  +     +  Y   L   C+ G+++ AL   +V  E  A   P +    
Sbjct: 661 GKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSAL---AVTREMNAQKIPRNTFVY 717

Query: 676 --LIHGLCKRGYLDLAMDVFLYTLKNGFILRPRVCNY 710
             LI G  +RG +  A D+     + G  ++P +  Y
Sbjct: 718 NILIDGWARRGDIWEAADLMQQMNQEG--VQPDIHTY 752



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 105/229 (45%)

Query: 67  SAVISMLLKPNGFDLYWQTLDELRSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKE 126
           +A++  L++    +   + LDE+    VS     +  ++ GY  +GD  KA E F KM+ 
Sbjct: 613 NALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRN 672

Query: 127 FDCQPDVYIYNAVLNIAFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEV 186
              Q DV+ Y A+L    +      ALAV  EM       N   +++LI+G ++ G    
Sbjct: 673 EGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWE 732

Query: 187 AIKMLDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLN 246
           A  ++ +M Q G+ P+  TYT  I+  C+      A +   +M+ +G  P+   Y  L++
Sbjct: 733 AADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIH 792

Query: 247 GFCKLRRVDEALALLRSFEKDGFVPRLGSYSCLIDGLFRAKRYDEAYAW 295
           G+      ++AL+     +  G  P    Y CL+  L       EAY +
Sbjct: 793 GWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAYIY 841



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 1/238 (0%)

Query: 90  RSGNVSVVSDVFFVLISGYYKVGDCEKALESFGKMKEFDCQPDVYIYNAVLNIAFRKQLF 149
           RSG +  V   F  L+ G  +    EKA+E   +M      PD + Y  +++        
Sbjct: 602 RSGCIPTVH-TFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDT 660

Query: 150 LLALAVYYEMVKLNCLPNIVTFSLLINGLSKSGKTEVAIKMLDEMTQRGILPNKFTYTIV 209
             A   + +M       ++ T+  L+    KSG+ + A+ +  EM  + I  N F Y I+
Sbjct: 661 GKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNIL 720

Query: 210 ISGLCQINRADEAYRLFLKMKDSGCSPDFVAYNALLNGFCKLRRVDEALALLRSFEKDGF 269
           I G  +     EA  L  +M   G  PD   Y + +N  CK   +  A   +   E  G 
Sbjct: 721 IDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGV 780

Query: 270 VPRLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVLYGVMIRGLSEAGKVKDA 327
            P + +Y+ LI G   A   ++A + + ++    ++PD  +Y  ++  L     V +A
Sbjct: 781 KPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEA 838



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/410 (20%), Positives = 162/410 (39%), Gaps = 49/410 (11%)

Query: 336 ERGIVPDTYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 395
           ER   P    +  ++  +   G + +AR     +  R   P++H +T LI        ++
Sbjct: 287 ERIKKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDME 346

Query: 396 DAQKLFNKMEKAGCFPSVGMFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGG 455
           +A     KM + G   S+  ++ ++ G  K G  E A+  F K    K     L     G
Sbjct: 347 EALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKK---AKERHTNLNAYIYG 403

Query: 456 NRVHDKASLQTMVEQYCTAGLIHKAYKILMQLAESGNLPDIITYNSLINGFCKVGNINGA 515
           N          ++  YC A  + +A  ++ ++ E G    +  Y+++++G+  + N    
Sbjct: 404 N----------IIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453

Query: 516 LKLFKELQLKGLRPDSVTYGTLINGLQRVDREEDAFRIFGQMPQNGCTPSPAVYKSLMTW 575
           L +FK L+  G  P  +TYG LIN   ++ +   A  +   M   G   +   Y  L+  
Sbjct: 454 LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLING 513

Query: 576 SCRRRKFSLAFSLWLQYLRDISGRDDESMKSIEEFLQKGEVENAIQGLLEMDFKLNDFQL 635
             + + ++ AF+++                           E+ I+  L+ D  L     
Sbjct: 514 FLKLKDWTNAFAVF---------------------------EDVIKDGLKPDVVL----- 541

Query: 636 APYTIWLIGLCQDGQVKEALNIFSVLVECKAIVTPPSCVKLIHGLCKRGYLDLAMDVFLY 695
             Y   +   C  G +  A+++   + + +   T  + + +IHG  + G +  A+++F  
Sbjct: 542 --YNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDM 599

Query: 696 TLKNGFILRPRVCNYLLRSLLFSKDNKKVHAYHLLCRMKSVGYDLDACLY 745
             ++G I      N L+  L+  +  +K  A  +L  M   G   D   Y
Sbjct: 600 MRRSGCIPTVHTFNALVLGLVEKRKMEK--AVEILDEMALAGVSPDEHTY 647


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.140    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,706,928,727
Number of Sequences: 23463169
Number of extensions: 484117908
Number of successful extensions: 1336921
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8547
Number of HSP's successfully gapped in prelim test: 4210
Number of HSP's that attempted gapping in prelim test: 1001694
Number of HSP's gapped (non-prelim): 97403
length of query: 767
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 616
effective length of database: 8,816,256,848
effective search space: 5430814218368
effective search space used: 5430814218368
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)